LK04_RS08205 2186e6c121f50c7614dbfb175d59fce1 294 Pfam PF02811 PHP domain 11 174 3.4E-9 T 22-04-2016 IPR004013 PHP domain GO:0003824 LK04_RS08205 2186e6c121f50c7614dbfb175d59fce1 294 SMART SM00481 10 77 4.8E-20 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LK04_RS08205 2186e6c121f50c7614dbfb175d59fce1 294 PANTHER PTHR30007 9 282 7.4E-100 T 22-04-2016 LK04_RS08205 2186e6c121f50c7614dbfb175d59fce1 294 SUPERFAMILY SSF89550 172 282 1.06E-51 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LK04_RS08205 2186e6c121f50c7614dbfb175d59fce1 294 SUPERFAMILY SSF89550 9 90 1.06E-51 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LK04_RS08205 2186e6c121f50c7614dbfb175d59fce1 294 Gene3D G3DSA:3.20.20.140 164 267 1.2E-41 T 22-04-2016 LK04_RS08205 2186e6c121f50c7614dbfb175d59fce1 294 Gene3D G3DSA:3.20.20.140 10 95 1.2E-41 T 22-04-2016 LK04_RS08205 2186e6c121f50c7614dbfb175d59fce1 294 PANTHER PTHR30007:SF4 9 282 7.4E-100 T 22-04-2016 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 Pfam PF08279 HTH domain 7 65 9.5E-9 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 SUPERFAMILY SSF63520 194 295 9.81E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 SUPERFAMILY SSF63520 315 418 9.81E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 PANTHER PTHR30185:SF5 3 504 2.8E-88 T 22-04-2016 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 Pfam PF05043 Mga helix-turn-helix domain 94 167 1.5E-6 T 22-04-2016 IPR007737 Mga helix-turn-helix domain LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 PANTHER PTHR30185 3 504 2.8E-88 T 22-04-2016 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 Gene3D G3DSA:1.10.10.10 93 155 1.2E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 Gene3D G3DSA:1.10.10.10 4 67 1.6E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 Gene3D G3DSA:1.10.1790.10 317 418 1.6E-19 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 Gene3D G3DSA:1.10.1790.10 199 295 3.2E-14 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 SUPERFAMILY SSF46785 3 64 3.35E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 Pfam PF00874 PRD domain 209 295 9.3E-11 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 Pfam PF00874 PRD domain 324 414 3.9E-16 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 SUPERFAMILY SSF52794 421 502 1.46E-11 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 423 479 6.1E-5 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS02070 b4aab28ddc2387c00f90886b53597862 520 Gene3D G3DSA:3.40.50.270 422 502 1.2E-9 T 22-04-2016 LK04_RS06600 0898e1c81c06ba96b011fe25f9dce051 438 Pfam PF00202 Aminotransferase class-III 32 428 3.3E-124 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS06600 0898e1c81c06ba96b011fe25f9dce051 438 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS06600 0898e1c81c06ba96b011fe25f9dce051 438 Gene3D G3DSA:3.90.1150.10 30 69 1.5E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS06600 0898e1c81c06ba96b011fe25f9dce051 438 Gene3D G3DSA:3.90.1150.10 329 431 1.5E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS06600 0898e1c81c06ba96b011fe25f9dce051 438 PANTHER PTHR11986 17 438 3.4E-184 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS06600 0898e1c81c06ba96b011fe25f9dce051 438 PANTHER PTHR11986:SF17 17 438 3.4E-184 T 22-04-2016 LK04_RS06600 0898e1c81c06ba96b011fe25f9dce051 438 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 21 431 5.7E-161 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 LK04_RS06600 0898e1c81c06ba96b011fe25f9dce051 438 SUPERFAMILY SSF53383 29 430 2.36E-132 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS06600 0898e1c81c06ba96b011fe25f9dce051 438 Gene3D G3DSA:3.40.640.10 70 327 9.5E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS17530 fe8765dae3a85cd4c8e6dd1febfdc576 118 Pfam PF10694 Protein of unknown function (DUF2500) 5 115 1.5E-33 T 22-04-2016 IPR019635 Protein of unknown function DUF2500 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 Gene3D G3DSA:3.40.630.20 2 212 1.6E-68 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 212 6.3E-84 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 2.5E-45 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.5E-45 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.5E-45 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.5E-45 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 2.5E-45 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 SUPERFAMILY SSF53182 1 215 4.71E-73 T 22-04-2016 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 PANTHER PTHR23402 1 214 7.2E-64 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 Pfam PF01470 Pyroglutamyl peptidase 3 202 2.0E-83 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 PANTHER PTHR23402:SF1 1 214 7.2E-64 T 22-04-2016 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 PIRSF PIRSF015592 1 213 6.0E-85 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 40.411 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 LK04_RS13130 d5a731954b4aaeec31e96452cefe1801 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LK04_RS13240 abf4f3c0d0621a8de065c3401f61df42 406 Gene3D G3DSA:3.30.420.40 84 224 1.7E-32 T 22-04-2016 LK04_RS13240 abf4f3c0d0621a8de065c3401f61df42 406 PANTHER PTHR18964 64 403 4.3E-204 T 22-04-2016 LK04_RS13240 abf4f3c0d0621a8de065c3401f61df42 406 SUPERFAMILY SSF53067 88 394 2.49E-55 T 22-04-2016 LK04_RS13240 abf4f3c0d0621a8de065c3401f61df42 406 PANTHER PTHR18964:SF128 64 403 4.3E-204 T 22-04-2016 LK04_RS13240 abf4f3c0d0621a8de065c3401f61df42 406 Pfam PF00480 ROK family 88 392 1.3E-90 T 22-04-2016 IPR000600 ROK family LK04_RS13240 abf4f3c0d0621a8de065c3401f61df42 406 Pfam PF01047 MarR family 25 63 7.9E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS13240 abf4f3c0d0621a8de065c3401f61df42 406 Gene3D G3DSA:1.10.10.10 14 79 7.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13240 abf4f3c0d0621a8de065c3401f61df42 406 SUPERFAMILY SSF46785 14 79 3.74E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13240 abf4f3c0d0621a8de065c3401f61df42 406 Gene3D G3DSA:3.30.420.40 225 376 2.5E-46 T 22-04-2016 LK04_RS13240 abf4f3c0d0621a8de065c3401f61df42 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 22-04-2016 IPR000600 ROK family LK04_RS01335 ca507be73307923bac89d1d62c1f2a78 316 Gene3D G3DSA:3.40.50.300 10 178 8.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01335 ca507be73307923bac89d1d62c1f2a78 316 Gene3D G3DSA:1.10.287.890 207 289 2.8E-33 T 22-04-2016 LK04_RS01335 ca507be73307923bac89d1d62c1f2a78 316 SUPERFAMILY SSF52540 13 155 3.3E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01335 ca507be73307923bac89d1d62c1f2a78 316 Pfam PF01715 IPP transferase 46 292 1.2E-84 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 LK04_RS01335 ca507be73307923bac89d1d62c1f2a78 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 6.9E-120 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 LK04_RS01335 ca507be73307923bac89d1d62c1f2a78 316 PANTHER PTHR11088 1 301 2.8E-122 T 22-04-2016 LK04_RS01335 ca507be73307923bac89d1d62c1f2a78 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 312 29.739 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 LK04_RS19085 219077de9837f72ce23962133a415449 443 PANTHER PTHR24423:SF474 169 443 5.8E-98 T 22-04-2016 LK04_RS19085 219077de9837f72ce23962133a415449 443 PANTHER PTHR24423:SF474 77 137 5.8E-98 T 22-04-2016 LK04_RS19085 219077de9837f72ce23962133a415449 443 SMART SM00388 231 297 3.7E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19085 219077de9837f72ce23962133a415449 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 296 2.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19085 219077de9837f72ce23962133a415449 443 Gene3D G3DSA:1.10.287.130 223 293 2.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19085 219077de9837f72ce23962133a415449 443 SMART SM00387 342 437 7.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19085 219077de9837f72ce23962133a415449 443 SUPERFAMILY SSF55874 286 442 1.07E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19085 219077de9837f72ce23962133a415449 443 PANTHER PTHR24423 169 443 5.8E-98 T 22-04-2016 LK04_RS19085 219077de9837f72ce23962133a415449 443 PANTHER PTHR24423 77 137 5.8E-98 T 22-04-2016 LK04_RS19085 219077de9837f72ce23962133a415449 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 441 2.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19085 219077de9837f72ce23962133a415449 443 SUPERFAMILY SSF47384 214 298 1.14E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19085 219077de9837f72ce23962133a415449 443 Pfam PF08521 Two-component sensor kinase N-terminal 18 154 1.6E-6 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal LK04_RS19085 219077de9837f72ce23962133a415449 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 7.8E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS19085 219077de9837f72ce23962133a415449 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 7.8E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS19085 219077de9837f72ce23962133a415449 443 Gene3D G3DSA:3.30.565.10 304 442 4.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19085 219077de9837f72ce23962133a415449 443 Gene3D G3DSA:1.20.5.1040 1 79 8.7E-19 T 22-04-2016 LK04_RS19085 219077de9837f72ce23962133a415449 443 Gene3D G3DSA:1.20.5.1040 96 178 3.5E-22 T 22-04-2016 LK04_RS15150 535c86ae5527c96e07dcc1a682b8bf14 178 PANTHER PTHR22573 1 175 7.0E-83 T 22-04-2016 LK04_RS15150 535c86ae5527c96e07dcc1a682b8bf14 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 6.3E-74 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 LK04_RS15150 535c86ae5527c96e07dcc1a682b8bf14 178 SUPERFAMILY SSF53271 3 175 8.13E-56 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS15150 535c86ae5527c96e07dcc1a682b8bf14 178 PANTHER PTHR22573:SF56 1 175 7.0E-83 T 22-04-2016 LK04_RS15150 535c86ae5527c96e07dcc1a682b8bf14 178 Pfam PF00156 Phosphoribosyl transferase domain 12 160 1.2E-26 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LK04_RS15150 535c86ae5527c96e07dcc1a682b8bf14 178 Gene3D G3DSA:3.40.50.2020 2 175 1.0E-80 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.7E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 Gene3D G3DSA:1.10.10.10 2 85 1.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 Pfam PF03466 LysR substrate binding domain 86 268 2.7E-16 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 SUPERFAMILY SSF53850 85 268 5.97E-16 T 22-04-2016 LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 SUPERFAMILY SSF46785 2 86 3.16E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 PANTHER PTHR30579 1 267 1.5E-88 T 22-04-2016 LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 PANTHER PTHR30579:SF0 1 267 1.5E-88 T 22-04-2016 LK04_RS19755 46c213dda92c822a65a002d828bd1226 273 Gene3D G3DSA:3.40.190.10 86 160 7.8E-7 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 8.1E-7 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 8.1E-7 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PANTHER PTHR11493:SF52 2 255 1.2E-281 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PANTHER PTHR11493:SF52 418 833 1.2E-281 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 286 9.5E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 SUPERFAMILY SSF55124 501 640 4.74E-27 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 Gene3D G3DSA:2.102.10.10 846 951 8.0E-33 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 Gene3D G3DSA:3.50.50.60 6 105 1.2E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 621 1.6E-11 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 631 769 6.1E-21 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 Gene3D G3DSA:3.30.413.10 631 769 2.1E-37 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 SUPERFAMILY SSF56014 632 801 1.44E-50 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.6E-14 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 6.6E-14 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.6E-14 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 Pfam PF13806 Rieske-like [2Fe-2S] domain 846 946 2.4E-28 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 469 2.2E-7 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 SUPERFAMILY SSF50022 846 950 3.17E-27 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.8E-10 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 1.8E-10 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 1.8E-10 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 1.8E-10 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 846 946 2.9E-28 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 SUPERFAMILY SSF51905 54 308 2.59E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PANTHER PTHR11493 2 255 1.2E-281 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 PANTHER PTHR11493 418 833 1.2E-281 T 22-04-2016 LK04_RS07315 990a0114059e7912f1e47fec3ec08713 958 Gene3D G3DSA:3.50.50.60 106 307 1.4E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07700 fdbf3ef055b9dadaaa07761c5677723f 280 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 11 70 3.7E-21 T 22-04-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 LK04_RS07700 fdbf3ef055b9dadaaa07761c5677723f 280 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 100 161 3.8E-30 T 22-04-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 LK04_RS07700 fdbf3ef055b9dadaaa07761c5677723f 280 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 174 273 1.0E-22 T 22-04-2016 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 LK04_RS07700 fdbf3ef055b9dadaaa07761c5677723f 280 SMART SM00530 11 66 6.1 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS07700 fdbf3ef055b9dadaaa07761c5677723f 280 SMART SM00530 100 155 1.2 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS07700 fdbf3ef055b9dadaaa07761c5677723f 280 Gene3D G3DSA:1.10.260.40 101 161 3.9E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS01460 5d92d8d148468b675fa2aae8fc97f7b7 445 SUPERFAMILY SSF56176 344 428 9.82E-24 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS01460 5d92d8d148468b675fa2aae8fc97f7b7 445 Gene3D G3DSA:3.10.580.10 198 337 5.4E-12 T 22-04-2016 LK04_RS01460 5d92d8d148468b675fa2aae8fc97f7b7 445 Gene3D G3DSA:3.30.465.10 341 425 3.2E-28 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS01460 5d92d8d148468b675fa2aae8fc97f7b7 445 SUPERFAMILY SSF54631 200 335 9.13E-21 T 22-04-2016 LK04_RS01460 5d92d8d148468b675fa2aae8fc97f7b7 445 Pfam PF01595 Domain of unknown function DUF21 6 197 1.5E-38 T 22-04-2016 IPR002550 Domain of unknown function DUF21 LK04_RS01460 5d92d8d148468b675fa2aae8fc97f7b7 445 PANTHER PTHR22777:SF16 1 429 0.0 T 22-04-2016 LK04_RS01460 5d92d8d148468b675fa2aae8fc97f7b7 445 SMART SM01091 346 426 1.3E-28 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS01460 5d92d8d148468b675fa2aae8fc97f7b7 445 PANTHER PTHR22777 1 429 0.0 T 22-04-2016 LK04_RS01460 5d92d8d148468b675fa2aae8fc97f7b7 445 Pfam PF03471 Transporter associated domain 347 425 1.5E-21 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS06210 2dc1561b14c3c51cc3bc893b4033a864 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.546 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 LK04_RS06210 2dc1561b14c3c51cc3bc893b4033a864 196 PANTHER PTHR21235:SF1 2 196 4.9E-88 T 22-04-2016 LK04_RS06210 2dc1561b14c3c51cc3bc893b4033a864 196 PIRSF PIRSF000495 1 196 2.8E-64 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 LK04_RS06210 2dc1561b14c3c51cc3bc893b4033a864 196 SUPERFAMILY SSF52317 3 195 7.49E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS06210 2dc1561b14c3c51cc3bc893b4033a864 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 1.7E-70 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 LK04_RS06210 2dc1561b14c3c51cc3bc893b4033a864 196 Gene3D G3DSA:3.40.50.880 1 196 2.9E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS06210 2dc1561b14c3c51cc3bc893b4033a864 196 PANTHER PTHR21235 2 196 4.9E-88 T 22-04-2016 LK04_RS06210 2dc1561b14c3c51cc3bc893b4033a864 196 Pfam PF00117 Glutamine amidotransferase class-I 39 194 9.6E-18 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LK04_RS09055 a2c4e4cf65fc09e0a4ce6535093c28f4 293 SUPERFAMILY SSF55174 8 62 1.3E-12 T 22-04-2016 LK04_RS09055 a2c4e4cf65fc09e0a4ce6535093c28f4 293 Pfam PF01479 S4 domain 8 52 2.6E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS09055 a2c4e4cf65fc09e0a4ce6535093c28f4 293 SMART SM00363 7 63 8.2E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS09055 a2c4e4cf65fc09e0a4ce6535093c28f4 293 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 1.0E-50 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LK04_RS09055 a2c4e4cf65fc09e0a4ce6535093c28f4 293 PANTHER PTHR21600 1 247 3.7E-140 T 22-04-2016 LK04_RS09055 a2c4e4cf65fc09e0a4ce6535093c28f4 293 Gene3D G3DSA:3.10.290.10 6 60 6.3E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS09055 a2c4e4cf65fc09e0a4ce6535093c28f4 293 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LK04_RS09055 a2c4e4cf65fc09e0a4ce6535093c28f4 293 SUPERFAMILY SSF55120 69 229 8.39E-37 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS09055 a2c4e4cf65fc09e0a4ce6535093c28f4 293 Pfam PF00849 RNA pseudouridylate synthase 69 193 6.9E-12 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS09055 a2c4e4cf65fc09e0a4ce6535093c28f4 293 PANTHER PTHR21600:SF24 1 247 3.7E-140 T 22-04-2016 LK04_RS03520 793371a345bb8e1110b4aebf98155a36 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 205 5.2E-74 T 22-04-2016 LK04_RS03520 793371a345bb8e1110b4aebf98155a36 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 206 7.4E-88 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LK04_RS03520 793371a345bb8e1110b4aebf98155a36 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LK04_RS03520 793371a345bb8e1110b4aebf98155a36 208 SUPERFAMILY SSF53335 10 204 4.34E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS03520 793371a345bb8e1110b4aebf98155a36 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.16 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LK04_RS03520 793371a345bb8e1110b4aebf98155a36 208 Gene3D G3DSA:3.40.50.150 11 205 1.6E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS03520 793371a345bb8e1110b4aebf98155a36 208 PANTHER PTHR11579 9 206 2.1E-86 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.872 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 Pfam PF00012 Hsp70 protein 4 601 1.3E-265 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PANTHER PTHR19375:SF173 2 636 0.0 T 22-04-2016 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 SUPERFAMILY SSF53067 187 382 2.01E-67 T 22-04-2016 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 SUPERFAMILY SSF100934 507 601 4.71E-26 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 Gene3D G3DSA:2.60.34.10 390 531 2.5E-69 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 7.1E-292 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PANTHER PTHR19375 2 636 0.0 T 22-04-2016 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 Gene3D G3DSA:3.30.420.40 119 195 3.0E-64 T 22-04-2016 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 Gene3D G3DSA:3.30.420.40 4 52 3.0E-64 T 22-04-2016 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 Gene3D G3DSA:3.30.420.40 196 229 3.1E-33 T 22-04-2016 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 Gene3D G3DSA:3.30.420.40 319 361 3.1E-33 T 22-04-2016 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 Gene3D G3DSA:1.20.1270.10 532 600 1.3E-26 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 SUPERFAMILY SSF53067 4 184 2.46E-66 T 22-04-2016 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 Gene3D G3DSA:3.90.640.10 230 315 2.8E-31 T 22-04-2016 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 SUPERFAMILY SSF100920 384 539 5.89E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 Gene3D G3DSA:3.30.30.30 53 107 6.9E-28 T 22-04-2016 LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.6E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.6E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PRINTS PR00301 70kDa heat shock protein signature 198 208 1.6E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.6E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.6E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.6E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.6E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.6E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS15640 e148b9c4c7c876f756311b36002e56cf 636 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.6E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS05745 73993ca9e80435e5fca60f89698f70ef 235 SUPERFAMILY SSF48317 32 221 3.01E-18 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS05745 73993ca9e80435e5fca60f89698f70ef 235 Gene3D G3DSA:1.20.144.10 33 223 1.5E-10 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS05745 73993ca9e80435e5fca60f89698f70ef 235 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 41.928 T 22-04-2016 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 UniPathway: UPA00030 LK04_RS05745 73993ca9e80435e5fca60f89698f70ef 235 SMART SM00014 95 210 4.8E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS05745 73993ca9e80435e5fca60f89698f70ef 235 Pfam PF01569 PAP2 superfamily 141 210 1.6E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 Gene3D G3DSA:1.25.40.10 69 178 1.5E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 Gene3D G3DSA:1.25.40.10 179 284 3.8E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 SMART SM00671 77 113 61.0 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 SMART SM00671 114 150 5.0E-4 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 SMART SM00671 151 184 10.0 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 SMART SM00671 185 228 160.0 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 SMART SM00671 2 29 170.0 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 SMART SM00671 241 276 9.7E-8 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 Pfam PF08238 Sel1 repeat 242 276 3.7E-5 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 Pfam PF08238 Sel1 repeat 187 221 3.5 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 Pfam PF08238 Sel1 repeat 2 28 0.075 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 Pfam PF08238 Sel1 repeat 155 182 41.0 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 Pfam PF08238 Sel1 repeat 114 150 7.8E-4 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 Pfam PF08238 Sel1 repeat 77 113 0.055 T 22-04-2016 IPR006597 Sel1-like repeat LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 SUPERFAMILY SSF81901 211 283 8.89E-10 T 22-04-2016 LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 SUPERFAMILY SSF81901 13 199 5.95E-20 T 22-04-2016 LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 PANTHER PTHR11102 77 276 1.8E-28 T 22-04-2016 LK04_RS15740 e93a5791cc259d79ef22d62695899eac 287 PANTHER PTHR11102 1 29 1.8E-28 T 22-04-2016 LK04_RS00145 30acec0949d893934774eaaee44a6c12 299 SUPERFAMILY SSF46785 4 111 3.6E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00145 30acec0949d893934774eaaee44a6c12 299 PANTHER PTHR30537:SF5 1 298 1.1E-107 T 22-04-2016 LK04_RS00145 30acec0949d893934774eaaee44a6c12 299 Gene3D G3DSA:1.10.10.10 8 82 5.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00145 30acec0949d893934774eaaee44a6c12 299 PANTHER PTHR30537 1 298 1.1E-107 T 22-04-2016 LK04_RS00145 30acec0949d893934774eaaee44a6c12 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 5.7E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00145 30acec0949d893934774eaaee44a6c12 299 Gene3D G3DSA:3.40.190.10 92 179 2.2E-25 T 22-04-2016 LK04_RS00145 30acec0949d893934774eaaee44a6c12 299 Pfam PF03466 LysR substrate binding domain 89 293 7.4E-47 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS00145 30acec0949d893934774eaaee44a6c12 299 SUPERFAMILY SSF53850 90 297 1.65E-49 T 22-04-2016 LK04_RS00145 30acec0949d893934774eaaee44a6c12 299 Gene3D G3DSA:3.40.190.10 180 259 1.1E-8 T 22-04-2016 LK04_RS03705 3788c2b0c540d78ab0447248111974f1 241 PANTHER PTHR30616 1 241 5.7E-128 T 22-04-2016 LK04_RS03705 3788c2b0c540d78ab0447248111974f1 241 Gene3D G3DSA:3.60.140.10 3 240 1.8E-95 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LK04_RS03705 3788c2b0c540d78ab0447248111974f1 241 SUPERFAMILY SSF64438 4 240 1.45E-82 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic LK04_RS03705 3788c2b0c540d78ab0447248111974f1 241 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 240 1.3E-61 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LK04_RS03705 3788c2b0c540d78ab0447248111974f1 241 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 239 1.4E-75 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LK04_RS03705 3788c2b0c540d78ab0447248111974f1 241 PANTHER PTHR30616:SF3 1 241 5.7E-128 T 22-04-2016 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 Gene3D G3DSA:1.10.260.40 2 57 6.0E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.0E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 PANTHER PTHR30146:SF57 1 332 1.2E-251 T 22-04-2016 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 SUPERFAMILY SSF53822 61 331 4.52E-84 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS03115 99d80d37a793c031df49da4712308a65 333 SMART SM00354 1 71 8.0E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.4E-39 T 22-04-2016 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 SUPERFAMILY SSF47413 1 59 2.36E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 PANTHER PTHR30146 1 332 1.2E-251 T 22-04-2016 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 Gene3D G3DSA:3.40.50.2300 166 329 9.4E-53 T 22-04-2016 LK04_RS03115 99d80d37a793c031df49da4712308a65 333 Gene3D G3DSA:3.40.50.2300 58 165 7.4E-44 T 22-04-2016 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Gene3D G3DSA:2.40.50.140 42 154 6.5E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 SMART SM00896 701 794 2.4E-45 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 SUPERFAMILY SSF54991 697 794 5.62E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Pfam PF01588 Putative tRNA binding domain 45 145 2.4E-27 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Gene3D G3DSA:3.50.40.10 197 392 2.4E-84 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 SMART SM00873 212 385 1.1E-96 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.574 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Gene3D G3DSA:3.30.56.10 1 38 1.3E-27 T 22-04-2016 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Gene3D G3DSA:3.30.56.10 155 183 1.3E-27 T 22-04-2016 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 SMART SM00874 403 471 1.2E-31 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Gene3D G3DSA:3.30.930.10 496 690 2.6E-65 T 22-04-2016 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 SUPERFAMILY SSF50249 35 198 4.9E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Pfam PF03484 tRNA synthetase B5 domain 405 471 8.0E-20 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Gene3D G3DSA:3.30.56.20 402 475 8.8E-28 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 SUPERFAMILY SSF55681 467 689 4.52E-54 T 22-04-2016 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 PANTHER PTHR10947:SF0 2 794 0.0 T 22-04-2016 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 PANTHER PTHR10947 2 794 0.0 T 22-04-2016 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 SUPERFAMILY SSF56037 195 393 1.8E-76 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.1E-290 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.0E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 SUPERFAMILY SSF46955 403 475 2.84E-21 T 22-04-2016 IPR009061 Putative DNA-binding domain LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Gene3D G3DSA:3.30.70.380 703 794 1.6E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LK04_RS10450 5cde5188d6e0d4d4c48a8aa9cb63a865 795 Pfam PF03483 B3/4 domain 212 385 1.0E-69 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LK04_RS06350 ad45e819fa6b1bbe323c3455c05761f2 304 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 176 296 3.8E-20 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS06350 ad45e819fa6b1bbe323c3455c05761f2 304 Gene3D G3DSA:1.10.1040.10 176 299 2.6E-20 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS06350 ad45e819fa6b1bbe323c3455c05761f2 304 Gene3D G3DSA:3.40.50.720 1 172 8.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06350 ad45e819fa6b1bbe323c3455c05761f2 304 SUPERFAMILY SSF48179 176 298 2.82E-19 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS06350 ad45e819fa6b1bbe323c3455c05761f2 304 SUPERFAMILY SSF51735 1 154 5.58E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06350 ad45e819fa6b1bbe323c3455c05761f2 304 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 149 1.1E-36 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS06350 ad45e819fa6b1bbe323c3455c05761f2 304 PANTHER PTHR21708 1 304 6.4E-98 T 22-04-2016 LK04_RS06350 ad45e819fa6b1bbe323c3455c05761f2 304 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 298 4.7E-62 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS06350 ad45e819fa6b1bbe323c3455c05761f2 304 PANTHER PTHR21708:SF26 1 304 6.4E-98 T 22-04-2016 LK04_RS04510 572df706e19b2fda4e118e278f24f5b7 194 PANTHER PTHR30333:SF1 1 194 4.7E-114 T 22-04-2016 LK04_RS04510 572df706e19b2fda4e118e278f24f5b7 194 PANTHER PTHR30333 1 194 4.7E-114 T 22-04-2016 LK04_RS04510 572df706e19b2fda4e118e278f24f5b7 194 Gene3D G3DSA:1.10.3820.10 15 187 1.5E-26 T 22-04-2016 LK04_RS04510 572df706e19b2fda4e118e278f24f5b7 194 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 3.4E-77 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal LK04_RS04510 572df706e19b2fda4e118e278f24f5b7 194 PIRSF PIRSF000013 1 194 4.4E-106 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 LK04_RS04510 572df706e19b2fda4e118e278f24f5b7 194 SUPERFAMILY SSF48695 11 188 2.31E-63 T 22-04-2016 IPR011031 Multihaem cytochrome LK04_RS04510 572df706e19b2fda4e118e278f24f5b7 194 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 6 188 2.6E-104 T 22-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 104 444 3.8E-130 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 PANTHER PTHR11236:SF18 25 446 8.8E-164 T 22-04-2016 LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 PRINTS PR00095 Anthranilate synthase component I signature 397 411 1.2E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 PRINTS PR00095 Anthranilate synthase component I signature 382 396 1.2E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 PRINTS PR00095 Anthranilate synthase component I signature 288 301 1.2E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 PRINTS PR00095 Anthranilate synthase component I signature 302 315 1.2E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 PANTHER PTHR11236 25 446 8.8E-164 T 22-04-2016 LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 SUPERFAMILY SSF56322 3 448 2.75E-147 T 22-04-2016 IPR005801 ADC synthase GO:0009058 LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 Gene3D G3DSA:3.60.120.10 11 448 1.7E-152 T 22-04-2016 IPR005801 ADC synthase GO:0009058 LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 Pfam PF00425 chorismate binding enzyme 188 440 2.1E-93 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal LK04_RS07840 d996229a355f7cfaa08ba320b6b84a21 452 Pfam PF04715 Anthranilate synthase component I, N terminal region 13 151 4.0E-28 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 Gene3D G3DSA:3.90.45.10 5 166 4.5E-62 T 22-04-2016 IPR023635 Peptide deformylase LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 PANTHER PTHR10458 1 169 4.5E-106 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 SUPERFAMILY SSF56420 3 165 1.83E-61 T 22-04-2016 IPR023635 Peptide deformylase LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.986 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.2E-63 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 PANTHER PTHR10458:SF10 1 169 4.5E-106 T 22-04-2016 LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 Pfam PF01327 Polypeptide deformylase 4 152 3.9E-49 T 22-04-2016 IPR023635 Peptide deformylase LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 PIRSF PIRSF004749 1 170 4.9E-54 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 PRINTS PR01576 Peptide deformylase signature 33 62 8.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 PRINTS PR01576 Peptide deformylase signature 89 100 8.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 PRINTS PR01576 Peptide deformylase signature 101 119 8.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LK04_RS01040 82e3644648a38fb6569108dd530ffa50 170 PRINTS PR01576 Peptide deformylase signature 120 149 8.9E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LK04_RS18255 1830c8f3dc4f4ca959ce30bc5528d642 546 Pfam PF11658 Cellulose biosynthesis protein BcsG 20 541 1.3E-230 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG LK04_RS18255 1830c8f3dc4f4ca959ce30bc5528d642 546 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 18 544 8.6E-220 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.325 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 PANTHER PTHR20856:SF20 1182 1342 0.0 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:2.30.150.10 592 656 1.2E-30 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:3.90.1110.10 153 230 1.2E-64 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:3.90.1110.10 346 444 1.2E-64 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 PANTHER PTHR20856 5 231 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 PANTHER PTHR20856 1034 1128 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 PANTHER PTHR20856 340 725 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 PANTHER PTHR20856 1182 1342 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 PANTHER PTHR20856 743 930 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:2.40.50.100 715 792 1.4E-30 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:3.90.1100.10 445 591 4.5E-147 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:3.90.1100.10 20 151 4.5E-147 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:3.90.1100.10 659 713 4.5E-147 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.0E-30 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:2.40.270.10 793 820 9.0E-90 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:2.40.270.10 1060 1242 9.0E-90 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 SUPERFAMILY SSF64484 343 939 0.0 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 SUPERFAMILY SSF64484 12 226 0.0 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 22-04-2016 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 341 454 2.0E-15 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 244 1.6E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:2.40.50.150 1045 1059 2.6E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Gene3D G3DSA:2.40.50.150 828 937 2.6E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.4E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 3.4E-160 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS17775 d9cf23526f05f8dd536f1e29e61f3a89 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.9E-57 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS06045 cda9bc1564093fa59be71fc2859b73fe 599 PANTHER PTHR30441:SF4 1 594 3.2E-114 T 22-04-2016 LK04_RS06045 cda9bc1564093fa59be71fc2859b73fe 599 Pfam PF05170 AsmA family 175 504 3.7E-22 T 22-04-2016 IPR007844 AsmA LK04_RS06045 cda9bc1564093fa59be71fc2859b73fe 599 PANTHER PTHR30441 1 594 3.2E-114 T 22-04-2016 LK04_RS18400 62b891f0d932356310e3a4571bdf073d 235 PANTHER PTHR31527 1 201 2.0E-13 T 22-04-2016 LK04_RS18400 62b891f0d932356310e3a4571bdf073d 235 Pfam PF09347 Domain of unknown function (DUF1989) 7 177 7.0E-50 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 LK04_RS18400 62b891f0d932356310e3a4571bdf073d 235 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 4 230 6.4E-86 T 22-04-2016 IPR017792 Urea carboxylase-associated protein 2 LK04_RS08485 d54400d6fbf9ff4017a208fb85376f21 872 Pfam PF11739 Dicarboxylate transport 657 858 1.9E-68 T 22-04-2016 IPR021730 Dicarboxylate transport LK04_RS00530 dbf18256fbd6f932b94ce40e57219b72 225 PANTHER PTHR11907:SF9 1 225 8.6E-59 T 22-04-2016 LK04_RS00530 dbf18256fbd6f932b94ce40e57219b72 225 PANTHER PTHR11907 1 225 8.6E-59 T 22-04-2016 LK04_RS00530 dbf18256fbd6f932b94ce40e57219b72 225 SUPERFAMILY SSF53271 48 223 1.84E-30 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS00530 dbf18256fbd6f932b94ce40e57219b72 225 Pfam PF00156 Phosphoribosyl transferase domain 136 222 1.4E-10 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LK04_RS00530 dbf18256fbd6f932b94ce40e57219b72 225 Gene3D G3DSA:3.40.50.2020 68 224 9.0E-28 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS00530 dbf18256fbd6f932b94ce40e57219b72 225 Gene3D G3DSA:3.40.50.2020 23 31 9.0E-28 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 428 1.7E-154 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 SUPERFAMILY SSF69304 156 429 1.31E-54 T 22-04-2016 LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 Gene3D G3DSA:3.40.50.10070 23 153 1.0E-53 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 PANTHER PTHR11731:SF123 1 122 1.9E-126 T 22-04-2016 LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 PANTHER PTHR11731:SF123 161 429 1.9E-126 T 22-04-2016 LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 Pfam PF04052 TolB amino-terminal domain 24 122 2.5E-33 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 Gene3D G3DSA:2.130.10.10 154 429 2.2E-72 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 PANTHER PTHR11731 1 122 1.9E-126 T 22-04-2016 LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 PANTHER PTHR11731 161 429 1.9E-126 T 22-04-2016 LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 Pfam PF07676 WD40-like Beta Propeller Repeat 238 273 4.0E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 Pfam PF07676 WD40-like Beta Propeller Repeat 282 316 8.4E-10 T 22-04-2016 IPR011659 WD40-like Beta Propeller LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 Pfam PF07676 WD40-like Beta Propeller Repeat 200 224 2.0E-4 T 22-04-2016 IPR011659 WD40-like Beta Propeller LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 Pfam PF07676 WD40-like Beta Propeller Repeat 375 399 0.022 T 22-04-2016 IPR011659 WD40-like Beta Propeller LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 SUPERFAMILY SSF52964 29 162 1.44E-41 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 LK04_RS13030 f0e6202d56344f34699e03344fe3ea91 431 Hamap MF_00671 Protein TolB [tolB]. 5 427 33.936 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 LK04_RS15790 a369b552033c0a9d498292d35ed1595d 449 PANTHER PTHR35566 1 449 1.4E-202 T 22-04-2016 LK04_RS15790 a369b552033c0a9d498292d35ed1595d 449 PANTHER PTHR35566:SF3 1 449 1.4E-202 T 22-04-2016 LK04_RS15790 a369b552033c0a9d498292d35ed1595d 449 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 447 1.8E-123 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 LK04_RS15790 a369b552033c0a9d498292d35ed1595d 449 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 446 1.2E-130 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 Gene3D G3DSA:1.20.200.10 139 403 1.2E-104 T 22-04-2016 LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 1.2E-249 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 92.16 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 3.6E-34 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 3.6E-34 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 3.6E-34 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 3.6E-34 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 SUPERFAMILY SSF48557 5 459 2.98E-158 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 Pfam PF00206 Lyase 12 342 1.4E-121 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 5.3E-5 T 22-04-2016 LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 5.3E-5 T 22-04-2016 LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 Pfam PF10415 Fumarase C C-terminus 408 461 2.7E-26 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 Gene3D G3DSA:1.10.275.10 4 138 1.0E-60 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 PANTHER PTHR11444 5 461 8.0E-255 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 PANTHER PTHR11444:SF1 5 461 8.0E-255 T 22-04-2016 LK04_RS09700 463a60f2fed1557373896f4b4a518025 465 Gene3D G3DSA:1.10.40.30 405 462 1.3E-33 T 22-04-2016 LK04_RS14245 bcbf3fffcad8be4927e5e5ea3880284e 94 Gene3D G3DSA:2.60.120.10 1 94 2.2E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS14245 bcbf3fffcad8be4927e5e5ea3880284e 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 4.2E-34 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 LK04_RS14245 bcbf3fffcad8be4927e5e5ea3880284e 94 PANTHER PTHR36540:SF1 1 94 2.8E-48 T 22-04-2016 LK04_RS14245 bcbf3fffcad8be4927e5e5ea3880284e 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 25.717 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 LK04_RS14245 bcbf3fffcad8be4927e5e5ea3880284e 94 PANTHER PTHR36540 1 94 2.8E-48 T 22-04-2016 LK04_RS14245 bcbf3fffcad8be4927e5e5ea3880284e 94 SUPERFAMILY SSF51182 1 94 1.13E-33 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 SMART SM00387 345 455 1.1E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 145 2.3E-10 T 22-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 PANTHER PTHR24423 1 134 2.7E-248 T 22-04-2016 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 PANTHER PTHR24423 178 454 2.7E-248 T 22-04-2016 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 SMART SM00304 184 237 3.4E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 SMART SM00388 238 300 5.0E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 SUPERFAMILY SSF55874 289 455 1.44E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 Gene3D G3DSA:1.10.287.130 228 285 3.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 5.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 5.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 5.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 5.5E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 Pfam PF00672 HAMP domain 165 234 7.8E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 SUPERFAMILY SSF47384 224 299 7.46E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 2.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 453 2.6E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 PANTHER PTHR24423:SF553 1 134 2.7E-248 T 22-04-2016 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 PANTHER PTHR24423:SF553 178 454 2.7E-248 T 22-04-2016 LK04_RS19520 391ea2a07c1d70cb89aac7e5e1acabc4 458 Gene3D G3DSA:3.30.565.10 286 455 2.7E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 PANTHER PTHR30295 9 167 1.9E-90 T 22-04-2016 LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 Pfam PF00210 Ferritin-like domain 30 166 4.8E-21 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 Gene3D G3DSA:1.20.1260.10 2 167 1.4E-52 T 22-04-2016 IPR012347 Ferritin-related LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 SUPERFAMILY SSF47240 10 167 8.12E-49 T 22-04-2016 IPR009078 Ferritin-like superfamily LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 PIRSF PIRSF005900 8 167 1.0E-41 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 45.866 T 22-04-2016 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.2E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.2E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 2.2E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LK04_RS12470 565b582d5ce5ebb3b1f7692abdd44f85 167 PANTHER PTHR30295:SF4 9 167 1.9E-90 T 22-04-2016 LK04_RS14155 00ec562e468fceb62bb20fc78218048b 193 PANTHER PTHR38764 2 193 1.6E-72 T 22-04-2016 LK04_RS14155 00ec562e468fceb62bb20fc78218048b 193 Pfam PF04336 Protein of unknown function, DUF479 81 186 2.1E-26 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 LK04_RS14155 00ec562e468fceb62bb20fc78218048b 193 PANTHER PTHR38764:SF1 2 193 1.6E-72 T 22-04-2016 LK04_RS14155 00ec562e468fceb62bb20fc78218048b 193 PIRSF PIRSF011489 1 193 1.1E-73 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 LK04_RS02650 79502ee9a467e73c9dd83eddbb774b66 359 Pfam PF01464 Transglycosylase SLT domain 195 319 8.4E-33 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 LK04_RS02650 79502ee9a467e73c9dd83eddbb774b66 359 PANTHER PTHR21666 175 359 7.3E-52 T 22-04-2016 LK04_RS02650 79502ee9a467e73c9dd83eddbb774b66 359 Pfam PF11873 Domain of unknown function (DUF3393) 5 191 2.2E-74 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal LK04_RS02650 79502ee9a467e73c9dd83eddbb774b66 359 SUPERFAMILY SSF53955 160 356 1.18E-36 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS02650 79502ee9a467e73c9dd83eddbb774b66 359 Gene3D G3DSA:1.10.530.10 187 358 2.8E-40 T 22-04-2016 LK04_RS02650 79502ee9a467e73c9dd83eddbb774b66 359 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 213 241 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 Pfam PF03466 LysR substrate binding domain 86 289 5.6E-43 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.0E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 Gene3D G3DSA:3.40.190.10 178 253 2.1E-19 T 22-04-2016 LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 SUPERFAMILY SSF53850 88 291 9.31E-40 T 22-04-2016 LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 PANTHER PTHR30126:SF25 1 303 6.3E-192 T 22-04-2016 LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 Gene3D G3DSA:3.40.190.10 90 177 1.4E-15 T 22-04-2016 LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 Gene3D G3DSA:1.10.10.10 1 85 1.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 PANTHER PTHR30126 1 303 6.3E-192 T 22-04-2016 LK04_RS17985 4b5dd1486932634b3f4e84876fbeb557 310 SUPERFAMILY SSF46785 1 109 9.25E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 4.8E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 Gene3D G3DSA:1.20.120.530 98 232 3.5E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 SUPERFAMILY SSF48008 101 231 1.15E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 Pfam PF07729 FCD domain 102 222 1.3E-22 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.1E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.1E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 SMART SM00895 100 223 3.8E-16 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 SUPERFAMILY SSF46785 5 75 6.72E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 SMART SM00345 12 71 1.8E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 Gene3D G3DSA:1.10.10.10 4 77 5.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 PANTHER PTHR11751:SF21 9 78 2.0E-37 T 22-04-2016 LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 PANTHER PTHR11751:SF21 98 116 2.0E-37 T 22-04-2016 LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 PANTHER PTHR11751 9 78 2.0E-37 T 22-04-2016 LK04_RS18805 5cf07953ef1818c2b8bf7557a3f0d076 232 PANTHER PTHR11751 98 116 2.0E-37 T 22-04-2016 LK04_RS06785 e10ea63df6937c116e12e1c4d076d907 249 SMART SM00382 30 216 3.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06785 e10ea63df6937c116e12e1c4d076d907 249 PANTHER PTHR24220 7 236 1.7E-129 T 22-04-2016 LK04_RS06785 e10ea63df6937c116e12e1c4d076d907 249 SUPERFAMILY SSF52540 3 235 1.04E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06785 e10ea63df6937c116e12e1c4d076d907 249 Gene3D G3DSA:3.40.50.300 2 234 8.8E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06785 e10ea63df6937c116e12e1c4d076d907 249 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06785 e10ea63df6937c116e12e1c4d076d907 249 PANTHER PTHR24220:SF515 7 236 1.7E-129 T 22-04-2016 LK04_RS06785 e10ea63df6937c116e12e1c4d076d907 249 Pfam PF00005 ABC transporter 21 165 2.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS11335 8dd2fec5060ac33f8ac667b15c898f4e 194 Pfam PF02545 Maf-like protein 5 186 4.7E-45 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 LK04_RS11335 8dd2fec5060ac33f8ac667b15c898f4e 194 PANTHER PTHR11746 119 191 3.1E-31 T 22-04-2016 LK04_RS11335 8dd2fec5060ac33f8ac667b15c898f4e 194 Hamap MF_00528 Septum formation protein Maf [maf]. 4 192 29.81 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 LK04_RS11335 8dd2fec5060ac33f8ac667b15c898f4e 194 PANTHER PTHR11746:SF102 119 191 3.1E-31 T 22-04-2016 LK04_RS11335 8dd2fec5060ac33f8ac667b15c898f4e 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 185 1.0E-59 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 LK04_RS11335 8dd2fec5060ac33f8ac667b15c898f4e 194 PIRSF PIRSF006305 1 194 6.1E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 LK04_RS11335 8dd2fec5060ac33f8ac667b15c898f4e 194 Gene3D G3DSA:3.90.950.10 2 191 9.1E-58 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LK04_RS11335 8dd2fec5060ac33f8ac667b15c898f4e 194 SUPERFAMILY SSF52972 1 187 1.7E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LK04_RS11395 fa702e7ba52c3380c0b135a4b6f391eb 134 PANTHER PTHR30435 1 134 1.2E-65 T 22-04-2016 LK04_RS11395 fa702e7ba52c3380c0b135a4b6f391eb 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 3.0E-10 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LK04_RS11395 fa702e7ba52c3380c0b135a4b6f391eb 134 Pfam PF00460 Flagella basal body rod protein 7 37 6.9E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LK04_RS11395 fa702e7ba52c3380c0b135a4b6f391eb 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site LK04_RS11395 fa702e7ba52c3380c0b135a4b6f391eb 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 9.1E-51 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 LK04_RS11395 fa702e7ba52c3380c0b135a4b6f391eb 134 PANTHER PTHR30435:SF2 1 134 1.2E-65 T 22-04-2016 LK04_RS13155 0ac0df8a6e850276e23b93db689fd8f4 218 SMART SM00796 4 202 4.2E-91 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D LK04_RS13155 0ac0df8a6e850276e23b93db689fd8f4 218 SUPERFAMILY SSF50891 88 214 5.31E-46 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS13155 0ac0df8a6e850276e23b93db689fd8f4 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 9.4E-92 T 22-04-2016 IPR010016 KipI family LK04_RS13155 0ac0df8a6e850276e23b93db689fd8f4 218 Gene3D G3DSA:2.40.100.10 88 213 2.5E-52 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS13155 0ac0df8a6e850276e23b93db689fd8f4 218 PANTHER PTHR34698:SF2 2 215 4.4E-91 T 22-04-2016 LK04_RS13155 0ac0df8a6e850276e23b93db689fd8f4 218 Pfam PF02682 Allophanate hydrolase subunit 1 6 202 3.2E-70 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D LK04_RS13155 0ac0df8a6e850276e23b93db689fd8f4 218 PANTHER PTHR34698 2 215 4.4E-91 T 22-04-2016 LK04_RS13155 0ac0df8a6e850276e23b93db689fd8f4 218 Gene3D G3DSA:3.30.1360.40 5 80 8.0E-9 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LK04_RS13155 0ac0df8a6e850276e23b93db689fd8f4 218 SUPERFAMILY SSF160467 5 93 9.29E-12 T 22-04-2016 LK04_RS16575 ca4f5c20f075b4dd0cab323953664eb6 101 Gene3D G3DSA:3.30.750.24 4 94 4.3E-12 T 22-04-2016 IPR002645 STAS domain LK04_RS16575 ca4f5c20f075b4dd0cab323953664eb6 101 Pfam PF13466 STAS domain 14 91 7.3E-17 T 22-04-2016 IPR002645 STAS domain LK04_RS16575 ca4f5c20f075b4dd0cab323953664eb6 101 PANTHER PTHR35849:SF1 1 94 3.9E-29 T 22-04-2016 LK04_RS16575 ca4f5c20f075b4dd0cab323953664eb6 101 SUPERFAMILY SSF52091 1 95 6.47E-14 T 22-04-2016 IPR002645 STAS domain LK04_RS16575 ca4f5c20f075b4dd0cab323953664eb6 101 PANTHER PTHR35849 1 94 3.9E-29 T 22-04-2016 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 57.755 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 Gene3D G3DSA:3.40.1500.10 4 302 3.6E-137 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 SUPERFAMILY SSF102886 4 302 3.01E-140 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 PIRSF PIRSF000166 2 303 2.3E-128 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 Pfam PF01218 Coproporphyrinogen III oxidase 8 302 3.7E-133 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 PANTHER PTHR10755 2 303 1.7E-195 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 PRINTS PR00073 Coprogen oxidase signature 234 261 3.1E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 PRINTS PR00073 Coprogen oxidase signature 262 288 3.1E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 PRINTS PR00073 Coprogen oxidase signature 162 191 3.1E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 PRINTS PR00073 Coprogen oxidase signature 125 147 3.1E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 PRINTS PR00073 Coprogen oxidase signature 48 69 3.1E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 PRINTS PR00073 Coprogen oxidase signature 31 47 3.1E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS04585 0992584b21d44bad1b151b9f55b033fe 306 PRINTS PR00073 Coprogen oxidase signature 90 114 3.1E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 Gene3D G3DSA:3.30.460.10 194 341 2.7E-49 T 22-04-2016 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 Pfam PF13328 HD domain 43 191 6.8E-41 T 22-04-2016 IPR003607 HD/PDEase domain LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 Gene3D G3DSA:3.30.70.260 665 740 3.0E-27 T 22-04-2016 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 SUPERFAMILY SSF81271 400 467 5.4E-22 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 SUPERFAMILY SSF81301 196 412 2.62E-62 T 22-04-2016 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 PANTHER PTHR21262:SF5 55 743 0.0 T 22-04-2016 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 Pfam PF02824 TGS domain 408 467 1.1E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 SUPERFAMILY SSF55021 666 741 7.53E-14 T 22-04-2016 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 PANTHER PTHR21262 55 743 0.0 T 22-04-2016 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 SUPERFAMILY SSF109604 23 207 5.65E-46 T 22-04-2016 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 740 4.6E-187 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 SMART SM00954 251 361 6.3E-64 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 Gene3D G3DSA:3.10.20.30 408 469 4.6E-25 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 Pfam PF13291 ACT domain 665 741 1.0E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LK04_RS03410 97bcc9ee02c312446a4a012816c3e3f3 743 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 1.1E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 PANTHER PTHR21110:SF0 2 407 2.6E-158 T 22-04-2016 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 Gene3D G3DSA:3.40.720.10 240 407 1.6E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 Gene3D G3DSA:3.40.720.10 1 113 1.6E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 7.0E-187 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 PANTHER PTHR21110 2 407 2.6E-158 T 22-04-2016 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.194 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 SUPERFAMILY SSF53649 1 114 2.49E-71 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 SUPERFAMILY SSF53649 236 407 2.49E-71 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 PIRSF PIRSF001491 1 407 2.8E-162 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 SUPERFAMILY SSF143856 117 235 1.01E-48 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 Gene3D G3DSA:3.30.70.1250 114 235 2.4E-51 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 LK04_RS02270 b354c1dd84cb5bebe452a7ece97367eb 407 Pfam PF01676 Metalloenzyme superfamily 2 398 2.1E-41 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 PANTHER PTHR11946:SF86 6 632 8.9E-247 T 22-04-2016 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 Gene3D G3DSA:2.20.28.20 145 176 5.0E-19 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 Pfam PF01588 Putative tRNA binding domain 581 674 1.4E-22 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 677 3.7E-45 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 PANTHER PTHR11946 6 632 8.9E-247 T 22-04-2016 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 535 5.5E-199 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 SUPERFAMILY SSF50249 570 676 5.88E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 Gene3D G3DSA:3.40.50.620 183 379 1.2E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 Gene3D G3DSA:3.40.50.620 6 144 1.2E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 40.941 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 SUPERFAMILY SSF57770 142 176 1.96E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 Gene3D G3DSA:1.10.730.10 380 531 2.0E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 Gene3D G3DSA:2.40.50.140 569 677 7.4E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 Pfam PF09334 tRNA synthetases class I (M) 8 396 1.1E-162 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 SUPERFAMILY SSF52374 176 387 2.2E-102 T 22-04-2016 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 SUPERFAMILY SSF52374 6 141 2.2E-102 T 22-04-2016 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 SUPERFAMILY SSF47323 390 547 1.72E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 2.4E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 2.4E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 2.4E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 2.4E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 2.4E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LK04_RS05890 580a67ce057fffff9e48a3e1db41d7a1 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 2.4E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LK04_RS15630 577c0db8be7a20aeac014914430af43d 392 PANTHER PTHR30341:SF0 7 392 3.6E-181 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LK04_RS15630 577c0db8be7a20aeac014914430af43d 392 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 14 387 1.4E-165 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LK04_RS15630 577c0db8be7a20aeac014914430af43d 392 Gene3D G3DSA:1.20.1530.10 11 390 2.4E-153 T 22-04-2016 IPR023171 Na/H antiporter domain LK04_RS15630 577c0db8be7a20aeac014914430af43d 392 PANTHER PTHR30341 7 392 3.6E-181 T 22-04-2016 LK04_RS15630 577c0db8be7a20aeac014914430af43d 392 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 11 392 23.14 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LK04_RS15630 577c0db8be7a20aeac014914430af43d 392 Pfam PF06965 Na+/H+ antiporter 1 13 387 9.7E-148 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 170 185 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PANTHER PTHR30587:SF0 4 243 3.3E-126 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 82 101 2.1E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 215 240 2.1E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 43 62 2.1E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 170 190 2.1E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 191 212 2.1E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 82 2.1E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 218 230 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 141 153 6.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 101 113 6.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 163 175 6.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 41 50 6.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 113 127 6.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 231 241 6.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 PANTHER PTHR30587 4 243 3.3E-126 T 22-04-2016 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 Pfam PF00813 FliP family 46 237 1.8E-78 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LK04_RS06905 762c4ffaee80c8241b29c87806e15070 243 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 45 241 1.1E-94 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SUPERFAMILY SSF47226 1084 1195 1.18E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 PANTHER PTHR24423 8 16 2.8E-157 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 PANTHER PTHR24423 557 1108 2.8E-157 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Pfam PF00072 Response regulator receiver domain 956 1065 3.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SMART SM00062 300 519 5.9E-31 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SMART SM00062 55 276 2.0E-18 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 PANTHER PTHR24423:SF382 8 16 2.8E-157 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 PANTHER PTHR24423:SF382 557 1108 2.8E-157 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Gene3D G3DSA:3.40.190.10 297 377 4.2E-19 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Gene3D G3DSA:3.40.190.10 479 517 4.2E-19 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SUPERFAMILY SSF53850 294 519 3.97E-34 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SMART SM00388 707 772 9.2E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Gene3D G3DSA:1.10.287.130 712 768 6.0E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 820 932 6.8E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 PRINTS PR00344 Bacterial sensor protein C-terminal signature 893 911 6.9E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 874 6.9E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 PRINTS PR00344 Bacterial sensor protein C-terminal signature 878 888 6.9E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 PRINTS PR00344 Bacterial sensor protein C-terminal signature 917 930 6.9E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SUPERFAMILY SSF52172 953 1110 2.7E-37 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SUPERFAMILY SSF55785 558 685 4.61E-11 T 22-04-2016 IPR000014 PAS domain LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 301 517 8.1E-30 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 56 273 1.7E-18 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Gene3D G3DSA:3.30.450.20 559 672 5.9E-9 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Gene3D G3DSA:3.30.450.20 673 711 6.0E-7 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SUPERFAMILY SSF55874 762 933 4.32E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Gene3D G3DSA:3.30.565.10 773 934 1.2E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Pfam PF00512 His Kinase A (phospho-acceptor) domain 708 772 1.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SMART SM00387 819 933 7.2E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SMART SM00448 954 1066 2.1E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Gene3D G3DSA:1.20.120.160 1081 1181 2.2E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SUPERFAMILY SSF53850 56 274 2.87E-26 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 SUPERFAMILY SSF47384 690 773 2.94E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Gene3D G3DSA:3.40.190.10 53 182 3.8E-11 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Pfam PF01627 Hpt domain 1106 1169 1.2E-6 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Gene3D G3DSA:3.40.190.10 378 462 6.8E-6 T 22-04-2016 LK04_RS13530 57070c735e9d32b9e8191a09e119ef27 1200 Gene3D G3DSA:3.40.50.2300 953 1069 1.1E-36 T 22-04-2016 LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 SMART SM00487 576 791 6.6E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 Gene3D G3DSA:3.40.50.300 899 1055 1.7E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 SUPERFAMILY SSF52540 570 830 9.26E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 Pfam PF00271 Helicase conserved C-terminal domain 905 1023 6.9E-16 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 Gene3D G3DSA:3.40.50.300 575 775 1.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 PANTHER PTHR10799:SF734 405 427 2.0E-153 T 22-04-2016 LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 PANTHER PTHR10799:SF734 569 1062 2.0E-153 T 22-04-2016 LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 Pfam PF00176 SNF2 family N-terminal domain 598 891 7.3E-49 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 PANTHER PTHR10799 405 427 2.0E-153 T 22-04-2016 LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 PANTHER PTHR10799 569 1062 2.0E-153 T 22-04-2016 LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 SUPERFAMILY SSF52540 821 1062 7.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01815 0d893fb6618670b6388ca0265d12e3cd 1083 SMART SM00490 934 1023 3.7E-16 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 Gene3D G3DSA:1.10.1660.10 57 135 5.7E-30 T 22-04-2016 LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 SUPERFAMILY SSF46955 2 121 1.9E-32 T 22-04-2016 IPR009061 Putative DNA-binding domain LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 PANTHER PTHR30204 2 122 6.4E-52 T 22-04-2016 LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 Gene3D G3DSA:1.10.1660.10 2 56 5.6E-25 T 22-04-2016 LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 PANTHER PTHR30204:SF18 2 122 6.4E-52 T 22-04-2016 LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.5E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.5E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.5E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 SMART SM00422 2 71 4.7E-29 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 Pfam PF13411 MerR HTH family regulatory protein 2 68 2.5E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS01010 e40d9119caad6434c21eabe4e24d37d9 145 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 2.0E-57 T 22-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 LK04_RS06310 86efa478187d5f704b7745ebc6ec3a33 450 Pfam PF02447 GntP family permease 7 448 1.9E-132 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS06310 86efa478187d5f704b7745ebc6ec3a33 450 PIRSF PIRSF002746 1 450 1.2E-141 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS06310 86efa478187d5f704b7745ebc6ec3a33 450 PANTHER PTHR30354 1 450 3.6E-192 T 22-04-2016 LK04_RS06310 86efa478187d5f704b7745ebc6ec3a33 450 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 446 1.8E-102 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS06310 86efa478187d5f704b7745ebc6ec3a33 450 PANTHER PTHR30354:SF2 1 450 3.6E-192 T 22-04-2016 LK04_RS11000 70882528e253dc7f26e8297cfd5f703a 244 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 4 240 28.857 T 22-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 LK04_RS11000 70882528e253dc7f26e8297cfd5f703a 244 Gene3D G3DSA:2.40.10.220 114 241 6.0E-31 T 22-04-2016 LK04_RS11000 70882528e253dc7f26e8297cfd5f703a 244 Pfam PF07317 Flagellar regulator YcgR 9 110 1.5E-26 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal LK04_RS11000 70882528e253dc7f26e8297cfd5f703a 244 Pfam PF07238 PilZ domain 113 230 5.3E-11 T 22-04-2016 IPR009875 PilZ domain GO:0035438 LK04_RS11000 70882528e253dc7f26e8297cfd5f703a 244 SUPERFAMILY SSF141371 113 194 6.67E-5 T 22-04-2016 LK04_RS11000 70882528e253dc7f26e8297cfd5f703a 244 Gene3D G3DSA:2.30.110.10 15 111 2.5E-10 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS09600 f3323c1930148af9317ac6a814a5cc60 184 PANTHER PTHR11080 9 184 3.3E-42 T 22-04-2016 LK04_RS09600 f3323c1930148af9317ac6a814a5cc60 184 Pfam PF00857 Isochorismatase family 10 178 2.9E-39 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS09600 f3323c1930148af9317ac6a814a5cc60 184 PANTHER PTHR11080:SF37 9 184 3.3E-42 T 22-04-2016 LK04_RS09600 f3323c1930148af9317ac6a814a5cc60 184 SUPERFAMILY SSF52499 8 183 8.24E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS09600 f3323c1930148af9317ac6a814a5cc60 184 Gene3D G3DSA:3.40.50.850 8 181 2.8E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS15955 37aafde7c56c7b93978e8f8d66108dd5 325 SUPERFAMILY SSF56784 107 312 2.8E-48 T 22-04-2016 IPR023214 HAD-like domain LK04_RS15955 37aafde7c56c7b93978e8f8d66108dd5 325 PANTHER PTHR10000:SF7 1 322 6.6E-197 T 22-04-2016 LK04_RS15955 37aafde7c56c7b93978e8f8d66108dd5 325 PANTHER PTHR10000 1 322 6.6E-197 T 22-04-2016 LK04_RS15955 37aafde7c56c7b93978e8f8d66108dd5 325 Gene3D G3DSA:3.40.50.1000 177 306 1.1E-39 T 22-04-2016 IPR023214 HAD-like domain LK04_RS15955 37aafde7c56c7b93978e8f8d66108dd5 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 2.0E-90 T 22-04-2016 LK04_RS15955 37aafde7c56c7b93978e8f8d66108dd5 325 Pfam PF00702 haloacid dehalogenase-like hydrolase 113 285 5.3E-16 T 22-04-2016 LK04_RS15955 37aafde7c56c7b93978e8f8d66108dd5 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 284 2.4E-26 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 LK04_RS15955 37aafde7c56c7b93978e8f8d66108dd5 325 Gene3D G3DSA:1.10.150.210 127 176 8.6E-28 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 Gene3D G3DSA:1.10.10.10 1 118 2.2E-46 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 Gene3D G3DSA:2.40.50.100 184 250 1.8E-16 T 22-04-2016 LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 Pfam PF03459 TOBE domain 196 254 6.0E-11 T 22-04-2016 IPR005116 Transport-associated OB, type 1 LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 Pfam PF03459 TOBE domain 124 186 6.7E-14 T 22-04-2016 IPR005116 Transport-associated OB, type 1 LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 Gene3D G3DSA:2.40.50.100 119 183 2.2E-30 T 22-04-2016 LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 2.9E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 SUPERFAMILY SSF46785 2 103 2.49E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 PANTHER PTHR30432 1 260 1.3E-67 T 22-04-2016 LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 SUPERFAMILY SSF50331 126 256 1.47E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 PIRSF PIRSF005763 1 259 2.8E-93 T 22-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 191 1.0E-24 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 LK04_RS12930 5085744b0c495d50edbd181273a0643d 260 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 112 4.6E-36 T 22-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 PANTHER PTHR24322 165 196 1.5E-94 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 Gene3D G3DSA:3.40.50.720 7 246 6.4E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 0.0042 T 22-04-2016 LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 PANTHER PTHR24322 17 149 1.5E-94 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 SUPERFAMILY SSF51735 10 247 1.06E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 Pfam PF00106 short chain dehydrogenase 14 210 8.9E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 PANTHER PTHR24322:SF337 165 196 1.5E-94 T 22-04-2016 LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 7.0E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 7.0E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 7.0E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 7.0E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.0E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 7.0E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08230 d9fb8334fb549ea2269b029752c9d474 254 PANTHER PTHR24322:SF337 17 149 1.5E-94 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 PANTHER PTHR13734:SF45 103 698 2.6E-157 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 45 878 1.3E-300 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Pfam PF01842 ACT domain 703 757 2.4E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Pfam PF01842 ACT domain 810 859 2.3E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Pfam PF01909 Nucleotidyltransferase domain 77 116 1.0E-6 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 SUPERFAMILY SSF81593 200 320 5.89E-9 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Pfam PF01966 HD domain 462 595 2.4E-17 T 22-04-2016 IPR006674 HD domain LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 SMART SM00471 458 605 1.8E-12 T 22-04-2016 IPR003607 HD/PDEase domain LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 SUPERFAMILY SSF55021 807 861 3.17E-9 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 SUPERFAMILY SSF109604 447 624 2.51E-14 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 PANTHER PTHR13734 103 698 2.6E-157 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Gene3D G3DSA:3.30.460.10 37 42 5.5E-7 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Gene3D G3DSA:3.30.460.10 76 174 5.5E-7 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Pfam PF08335 GlnD PII-uridylyltransferase 186 325 1.9E-35 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 884 341.339 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 SUPERFAMILY SSF81301 10 182 9.22E-22 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Gene3D G3DSA:3.30.70.260 810 862 4.9E-8 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Gene3D G3DSA:3.30.70.260 702 756 1.9E-4 T 22-04-2016 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 PIRSF PIRSF006288 16 884 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 Gene3D G3DSA:1.10.3210.10 432 624 1.7E-29 T 22-04-2016 IPR006674 HD domain LK04_RS14995 49797f7f19f6c7987f88de6fdfaab49c 884 SUPERFAMILY SSF55021 699 767 2.33E-9 T 22-04-2016 LK04_RS17005 690305a151d8bd355060bb4037b90cc5 386 PANTHER PTHR22604 1 209 1.0E-53 T 22-04-2016 LK04_RS17005 690305a151d8bd355060bb4037b90cc5 386 PANTHER PTHR22604 240 379 1.0E-53 T 22-04-2016 LK04_RS17005 690305a151d8bd355060bb4037b90cc5 386 Gene3D G3DSA:3.40.50.720 1 140 7.0E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS17005 690305a151d8bd355060bb4037b90cc5 386 SUPERFAMILY SSF51735 1 158 1.61E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS17005 690305a151d8bd355060bb4037b90cc5 386 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 141 219 2.0E-6 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS17005 690305a151d8bd355060bb4037b90cc5 386 Gene3D G3DSA:3.30.360.10 141 369 3.0E-30 T 22-04-2016 LK04_RS17005 690305a151d8bd355060bb4037b90cc5 386 SUPERFAMILY SSF55347 240 317 1.34E-24 T 22-04-2016 LK04_RS17005 690305a151d8bd355060bb4037b90cc5 386 SUPERFAMILY SSF55347 128 213 1.34E-24 T 22-04-2016 LK04_RS17005 690305a151d8bd355060bb4037b90cc5 386 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 116 8.6E-17 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS13340 824ca749b9e1734dfffbd5800b7927e7 241 PANTHER PTHR24220 3 240 3.0E-187 T 22-04-2016 LK04_RS13340 824ca749b9e1734dfffbd5800b7927e7 241 SMART SM00382 26 213 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS13340 824ca749b9e1734dfffbd5800b7927e7 241 PIRSF PIRSF039085 1 241 1.4E-105 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS13340 824ca749b9e1734dfffbd5800b7927e7 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS13340 824ca749b9e1734dfffbd5800b7927e7 241 Gene3D G3DSA:3.40.50.300 1 236 1.4E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13340 824ca749b9e1734dfffbd5800b7927e7 241 PANTHER PTHR24220:SF317 3 240 3.0E-187 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 LK04_RS13340 824ca749b9e1734dfffbd5800b7927e7 241 Pfam PF00005 ABC transporter 17 165 6.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS13340 824ca749b9e1734dfffbd5800b7927e7 241 SUPERFAMILY SSF52540 1 235 4.24E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11745 68035868c4045745e9bf674e275da3b2 267 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 1 258 50.675 T 22-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 LK04_RS11745 68035868c4045745e9bf674e275da3b2 267 SUPERFAMILY SSF53474 8 256 2.8E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS11745 68035868c4045745e9bf674e275da3b2 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 3.8E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS11745 68035868c4045745e9bf674e275da3b2 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 3.8E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS11745 68035868c4045745e9bf674e275da3b2 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.8E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS11745 68035868c4045745e9bf674e275da3b2 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 3.8E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS11745 68035868c4045745e9bf674e275da3b2 267 Pfam PF00561 alpha/beta hydrolase fold 14 119 5.1E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS11745 68035868c4045745e9bf674e275da3b2 267 PANTHER PTHR10992 1 257 5.8E-38 T 22-04-2016 LK04_RS11745 68035868c4045745e9bf674e275da3b2 267 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 256 3.8E-108 T 22-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 LK04_RS11745 68035868c4045745e9bf674e275da3b2 267 Gene3D G3DSA:3.40.50.1820 2 256 1.5E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS09235 d6810702ad0b4a0181875a5094b71b73 160 Gene3D G3DSA:2.30.110.20 1 159 1.7E-54 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp LK04_RS09235 d6810702ad0b4a0181875a5094b71b73 160 Pfam PF05638 Type VI secretion system effector, Hcp 6 131 2.6E-35 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp LK04_RS09235 d6810702ad0b4a0181875a5094b71b73 160 PANTHER PTHR36152:SF1 1 160 9.2E-46 T 22-04-2016 LK04_RS09235 d6810702ad0b4a0181875a5094b71b73 160 SUPERFAMILY SSF141452 3 158 1.57E-45 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp LK04_RS09235 d6810702ad0b4a0181875a5094b71b73 160 PANTHER PTHR36152 1 160 9.2E-46 T 22-04-2016 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 SUPERFAMILY SSF63380 3 97 1.47E-21 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 2.8E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 2.8E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 2.8E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 2.8E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 2.8E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 Gene3D G3DSA:3.40.50.80 100 231 5.8E-37 T 22-04-2016 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 PANTHER PTHR19370 4 233 3.8E-129 T 22-04-2016 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 PANTHER PTHR19370:SF119 4 233 3.8E-129 T 22-04-2016 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 Gene3D G3DSA:2.40.30.10 3 98 9.1E-30 T 22-04-2016 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 2.8E-21 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 SUPERFAMILY SSF52343 100 231 7.86E-35 T 22-04-2016 LK04_RS17905 af20be1e20e190c6485de5b1743b2da8 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 5.2E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 PANTHER PTHR23083:SF396 91 385 1.9E-38 T 22-04-2016 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 Pfam PF07219 HemY protein N-terminus 26 132 4.4E-36 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 SMART SM00028 328 361 0.0031 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 SMART SM00028 84 117 290.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 3.9E-120 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 Pfam PF07719 Tetratricopeptide repeat 329 360 4.0E-6 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 SUPERFAMILY SSF48452 328 383 4.46E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 SUPERFAMILY SSF48452 84 186 4.46E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 SUPERFAMILY SSF48452 332 362 8.53E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 SUPERFAMILY SSF48452 232 300 8.53E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 Gene3D G3DSA:1.25.40.10 81 203 1.6E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 Gene3D G3DSA:1.25.40.10 265 385 1.6E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18105 2b8dfaf344e30b3c87ff660113a18173 398 PANTHER PTHR23083 91 385 1.9E-38 T 22-04-2016 LK04_RS15355 6e429253e4ccf87e474ed0b4dabcb95a 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 19.4 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 LK04_RS15355 6e429253e4ccf87e474ed0b4dabcb95a 65 PANTHER PTHR36150 3 64 6.0E-26 T 22-04-2016 LK04_RS15355 6e429253e4ccf87e474ed0b4dabcb95a 65 Gene3D G3DSA:3.30.50.10 2 64 7.9E-27 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 LK04_RS15355 6e429253e4ccf87e474ed0b4dabcb95a 65 PANTHER PTHR36150:SF1 3 64 6.0E-26 T 22-04-2016 LK04_RS15355 6e429253e4ccf87e474ed0b4dabcb95a 65 SUPERFAMILY SSF57716 5 63 9.69E-22 T 22-04-2016 LK04_RS15355 6e429253e4ccf87e474ed0b4dabcb95a 65 Pfam PF03884 Domain of unknown function (DUF329) 8 58 1.6E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 3.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 3.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 3.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 3.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 3.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 PANTHER PTHR11732 3 270 1.0E-123 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 Pfam PF00248 Aldo/keto reductase family 18 192 1.6E-35 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 Pfam PF00248 Aldo/keto reductase family 200 260 6.6E-11 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 SUPERFAMILY SSF51430 5 266 4.98E-85 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LK04_RS02090 4c51eb3d04e4c3cf8f21490c245e0076 275 Gene3D G3DSA:3.20.20.100 4 271 7.2E-100 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS02975 c411f4500c4f5f46c29c30327482f957 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 31.278 T 22-04-2016 IPR002930 Glycine cleavage system H-protein LK04_RS02975 c411f4500c4f5f46c29c30327482f957 128 PANTHER PTHR11715:SF12 1 128 1.8E-70 T 22-04-2016 LK04_RS02975 c411f4500c4f5f46c29c30327482f957 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 1.7E-53 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 LK04_RS02975 c411f4500c4f5f46c29c30327482f957 128 SUPERFAMILY SSF51230 4 127 5.23E-44 T 22-04-2016 IPR011053 Single hybrid motif LK04_RS02975 c411f4500c4f5f46c29c30327482f957 128 Gene3D G3DSA:2.40.50.100 7 127 5.0E-49 T 22-04-2016 LK04_RS02975 c411f4500c4f5f46c29c30327482f957 128 Pfam PF01597 Glycine cleavage H-protein 8 125 5.4E-46 T 22-04-2016 IPR002930 Glycine cleavage system H-protein LK04_RS02975 c411f4500c4f5f46c29c30327482f957 128 PANTHER PTHR11715 1 128 1.8E-70 T 22-04-2016 IPR002930 Glycine cleavage system H-protein LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Gene3D G3DSA:2.40.40.20 417 489 2.8E-37 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Gene3D G3DSA:2.40.40.20 349 376 2.8E-37 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.3E-90 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.287 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 PANTHER PTHR19376 963 1157 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.7E-27 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 PANTHER PTHR19376 1303 1374 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 PANTHER PTHR19376:SF32 1177 1262 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 PANTHER PTHR19376:SF32 1303 1374 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.8E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1375 10.412 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 PANTHER PTHR19376 1177 1262 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 PANTHER PTHR19376 570 943 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 SMART SM00663 235 514 1.1E-184 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 PANTHER PTHR19376:SF32 963 1157 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 PANTHER PTHR19376:SF32 570 943 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Gene3D G3DSA:2.40.50.100 1156 1209 1.2E-5 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.7E-18 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 SUPERFAMILY SSF64484 1133 1364 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 SUPERFAMILY SSF64484 16 944 0.0 T 22-04-2016 LK04_RS17770 138440f2be046397173da2f8d7c03f9c 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 2.7E-77 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS17910 a18cb70802534208a7aca972bf1ebd4d 494 SUPERFAMILY SSF143968 323 486 9.42E-65 T 22-04-2016 LK04_RS17910 a18cb70802534208a7aca972bf1ebd4d 494 SUPERFAMILY SSF50475 3 322 8.24E-130 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS17910 a18cb70802534208a7aca972bf1ebd4d 494 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 1.1E-172 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 LK04_RS17910 a18cb70802534208a7aca972bf1ebd4d 494 PANTHER PTHR30108:SF1 1 494 2.9E-283 T 22-04-2016 LK04_RS17910 a18cb70802534208a7aca972bf1ebd4d 494 Gene3D G3DSA:3.40.1670.10 338 454 5.5E-54 T 22-04-2016 LK04_RS17910 a18cb70802534208a7aca972bf1ebd4d 494 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 74.017 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 LK04_RS17910 a18cb70802534208a7aca972bf1ebd4d 494 Gene3D G3DSA:1.20.5.570 455 488 1.3E-20 T 22-04-2016 LK04_RS17910 a18cb70802534208a7aca972bf1ebd4d 494 PANTHER PTHR30108 1 494 2.9E-283 T 22-04-2016 LK04_RS17910 a18cb70802534208a7aca972bf1ebd4d 494 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 7.1E-188 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 LK04_RS13675 67a43112e08a8805382ce9f25511c12a 238 Gene3D G3DSA:3.60.21.10 3 123 9.1E-24 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS13675 67a43112e08a8805382ce9f25511c12a 238 Gene3D G3DSA:3.60.21.10 171 206 9.1E-24 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS13675 67a43112e08a8805382ce9f25511c12a 238 PANTHER PTHR34990:SF1 1 238 8.5E-125 T 22-04-2016 LK04_RS13675 67a43112e08a8805382ce9f25511c12a 238 SUPERFAMILY SSF56300 3 222 1.35E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS13675 67a43112e08a8805382ce9f25511c12a 238 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 238 128.116 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 LK04_RS13675 67a43112e08a8805382ce9f25511c12a 238 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 230 9.2E-107 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 LK04_RS13675 67a43112e08a8805382ce9f25511c12a 238 PANTHER PTHR34990 1 238 8.5E-125 T 22-04-2016 LK04_RS13675 67a43112e08a8805382ce9f25511c12a 238 Pfam PF00149 Calcineurin-like phosphoesterase 3 197 9.9E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 Pfam PF00355 Rieske [2Fe-2S] domain 5 89 6.5E-13 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 Gene3D G3DSA:3.50.50.60 218 337 2.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 SUPERFAMILY SSF55424 421 495 1.13E-15 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 Gene3D G3DSA:2.102.10.10 4 103 7.7E-28 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 SUPERFAMILY SSF50022 4 104 3.8E-24 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 Gene3D G3DSA:3.50.50.60 338 419 2.0E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 Gene3D G3DSA:3.50.50.60 120 217 6.3E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 Gene3D G3DSA:3.30.390.30 428 492 2.4E-12 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 381 388 2.7E-11 T 22-04-2016 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 118 140 2.7E-11 T 22-04-2016 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 357 2.7E-11 T 22-04-2016 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 258 283 2.7E-11 T 22-04-2016 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 213 231 1.2E-11 T 22-04-2016 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 276 1.2E-11 T 22-04-2016 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 342 358 1.2E-11 T 22-04-2016 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 119 138 1.2E-11 T 22-04-2016 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 119 409 8.2E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 PANTHER PTHR22912 104 473 1.0E-97 T 22-04-2016 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 PANTHER PTHR22912:SF180 104 473 1.0E-97 T 22-04-2016 LK04_RS14295 fb6df24d042a1bbeb0255f7fe330cda0 508 SUPERFAMILY SSF51905 119 419 1.36E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02550 8060179d64d3a23e0f7da323f3d592ef 296 SUPERFAMILY SSF53474 69 294 8.46E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS02550 8060179d64d3a23e0f7da323f3d592ef 296 Gene3D G3DSA:3.40.50.1820 68 293 1.4E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS02550 8060179d64d3a23e0f7da323f3d592ef 296 Pfam PF01738 Dienelactone hydrolase family 85 294 8.7E-51 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 LK04_RS02550 8060179d64d3a23e0f7da323f3d592ef 296 PANTHER PTHR17630:SF32 68 294 1.5E-61 T 22-04-2016 LK04_RS02550 8060179d64d3a23e0f7da323f3d592ef 296 PANTHER PTHR17630 68 294 1.5E-61 T 22-04-2016 LK04_RS09210 73ceb1bcde7f98f7d490b1f31ae08531 1197 Pfam PF06744 Type VI secretion protein IcmF C-terminal 951 1152 3.4E-56 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal LK04_RS09210 73ceb1bcde7f98f7d490b1f31ae08531 1197 Pfam PF14331 ImcF-related N-terminal domain 208 468 3.2E-92 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain LK04_RS09210 73ceb1bcde7f98f7d490b1f31ae08531 1197 PANTHER PTHR36153:SF1 1 1191 7.4E-227 T 22-04-2016 LK04_RS09210 73ceb1bcde7f98f7d490b1f31ae08531 1197 Pfam PF06761 Intracellular multiplication and human macrophage-killing 520 823 6.7E-78 T 22-04-2016 IPR009612 ImcF-related LK04_RS09210 73ceb1bcde7f98f7d490b1f31ae08531 1197 PANTHER PTHR36153 1 1191 7.4E-227 T 22-04-2016 LK04_RS09210 73ceb1bcde7f98f7d490b1f31ae08531 1197 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1197 0.0 T 22-04-2016 IPR017731 Type VI secretion system, IcmF LK04_RS09210 73ceb1bcde7f98f7d490b1f31ae08531 1197 SUPERFAMILY SSF52540 136 302 8.61E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 Pfam PF04851 Type III restriction enzyme, res subunit 282 458 2.6E-15 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 PANTHER PTHR30195 4 972 2.3E-259 T 22-04-2016 LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 2 208 3.9E-35 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 SMART SM00487 265 492 8.7E-9 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 SUPERFAMILY SSF52540 546 585 5.72E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 SUPERFAMILY SSF52540 411 491 5.72E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 SUPERFAMILY SSF52540 615 695 5.72E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 Pfam PF11867 Domain of unknown function (DUF3387) 711 1039 4.8E-115 T 22-04-2016 IPR021810 Protein of unknown function DUF3387 LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 PANTHER PTHR30195:SF15 4 972 2.3E-259 T 22-04-2016 LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 713 7.2E-190 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 SUPERFAMILY SSF52540 230 517 1.15E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01850 c9fc4e43e89448abeadfc2007510bb55 1043 Gene3D G3DSA:3.40.50.300 267 470 1.1E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18185 5c6775ffb849651ee1fa7f28b5cf409d 358 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 345 4.7E-159 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 LK04_RS18185 5c6775ffb849651ee1fa7f28b5cf409d 358 PANTHER PTHR22926:SF3 7 353 1.4E-109 T 22-04-2016 LK04_RS18185 5c6775ffb849651ee1fa7f28b5cf409d 358 Pfam PF00953 Glycosyl transferase family 4 71 228 5.2E-29 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS18185 5c6775ffb849651ee1fa7f28b5cf409d 358 PANTHER PTHR22926 7 353 1.4E-109 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS18185 5c6775ffb849651ee1fa7f28b5cf409d 358 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 348 27.837 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 2.8E-11 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 PANTHER PTHR23389 1 533 3.6E-214 T 22-04-2016 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 SUPERFAMILY SSF47781 403 583 7.04E-62 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Gene3D G3DSA:1.10.150.20 435 502 3.5E-28 T 22-04-2016 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Gene3D G3DSA:2.40.50.140 319 391 1.4E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Gene3D G3DSA:3.30.470.30 119 252 3.2E-51 T 22-04-2016 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 2.1E-35 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 318 4.1E-138 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 SUPERFAMILY SSF50249 318 400 2.4E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 SUPERFAMILY SSF56091 2 316 2.72E-121 T 22-04-2016 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Gene3D G3DSA:1.10.287.610 2 67 7.7E-28 T 22-04-2016 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 PANTHER PTHR23389:SF9 1 533 3.6E-214 T 22-04-2016 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Hamap MF_01588 DNA ligase [ligA]. 2 669 54.361 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Pfam PF14520 Helix-hairpin-helix domain 446 502 2.9E-6 T 22-04-2016 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 668 3.8E-14 T 22-04-2016 IPR001357 BRCT domain LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 4.8E-272 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Gene3D G3DSA:1.10.150.20 506 584 1.3E-31 T 22-04-2016 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 SUPERFAMILY SSF52113 596 669 5.07E-20 T 22-04-2016 IPR001357 BRCT domain LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 SMART SM00292 595 670 6.9E-14 T 22-04-2016 IPR001357 BRCT domain LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 SMART SM00532 3 448 1.0E-287 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Gene3D G3DSA:3.40.50.10190 595 669 2.0E-27 T 22-04-2016 IPR001357 BRCT domain LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 PIRSF PIRSF001604 1 671 1.7E-253 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 SMART SM00278 480 499 0.53 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 SMART SM00278 512 531 170.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 SMART SM00278 446 465 24.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 SMART SM00278 544 563 210.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LK04_RS04685 dde8372665e068a5d176ddc3701cbc3d 671 Pfam PF12826 Helix-hairpin-helix motif 510 573 2.2E-22 T 22-04-2016 LK04_RS00740 1306237425e76ce785a935f8c8793648 72 Gene3D G3DSA:1.10.10.610 1 71 1.7E-35 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 LK04_RS00740 1306237425e76ce785a935f8c8793648 72 PIRSF PIRSF006169 1 72 7.4E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 LK04_RS00740 1306237425e76ce785a935f8c8793648 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 2 68 1.3E-33 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 LK04_RS00740 1306237425e76ce785a935f8c8793648 72 SUPERFAMILY SSF118001 1 70 1.7E-27 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 LK04_RS00740 1306237425e76ce785a935f8c8793648 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 23.536 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 LK04_RS00740 1306237425e76ce785a935f8c8793648 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 1.0E-24 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 LK04_RS09610 4ed926496008e8c35d27549dffc5f784 181 SUPERFAMILY SSF51182 51 176 3.56E-21 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS09610 4ed926496008e8c35d27549dffc5f784 181 PANTHER PTHR10245:SF9 1 177 2.1E-49 T 22-04-2016 LK04_RS09610 4ed926496008e8c35d27549dffc5f784 181 Pfam PF01381 Helix-turn-helix 12 65 8.6E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS09610 4ed926496008e8c35d27549dffc5f784 181 SMART SM00530 11 66 1.5E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS09610 4ed926496008e8c35d27549dffc5f784 181 SUPERFAMILY SSF47413 3 71 2.31E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS09610 4ed926496008e8c35d27549dffc5f784 181 Gene3D G3DSA:2.60.120.10 87 177 2.0E-28 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS09610 4ed926496008e8c35d27549dffc5f784 181 Pfam PF07883 Cupin domain 106 173 4.0E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel LK04_RS09610 4ed926496008e8c35d27549dffc5f784 181 PANTHER PTHR10245 1 177 2.1E-49 T 22-04-2016 LK04_RS09610 4ed926496008e8c35d27549dffc5f784 181 Gene3D G3DSA:1.10.260.40 2 73 2.6E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 663 2.7E-244 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 SUPERFAMILY SSF50249 9 175 2.57E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 PANTHER PTHR24031:SF249 299 602 1.0E-129 T 22-04-2016 LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 PANTHER PTHR24031:SF249 258 282 1.0E-129 T 22-04-2016 LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 PANTHER PTHR24031:SF249 654 689 1.0E-129 T 22-04-2016 LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 SMART SM00490 504 588 1.9E-22 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 Pfam PF00271 Helicase conserved C-terminal domain 478 587 2.3E-18 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 Gene3D G3DSA:3.40.50.300 454 637 8.9E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 Pfam PF17191 RecG wedge domain 14 172 7.0E-19 T 22-04-2016 IPR033454 RecG, wedge domain LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 PANTHER PTHR24031 299 602 1.0E-129 T 22-04-2016 LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 PANTHER PTHR24031 258 282 1.0E-129 T 22-04-2016 LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 PANTHER PTHR24031 654 689 1.0E-129 T 22-04-2016 LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 Gene3D G3DSA:3.40.50.300 255 453 2.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 Gene3D G3DSA:2.40.50.140 47 141 1.9E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 SMART SM00487 265 459 2.4E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 SUPERFAMILY SSF52540 210 453 8.24E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 Pfam PF00270 DEAD/DEAH box helicase 291 431 2.2E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 SUPERFAMILY SSF52540 292 342 1.17E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19260 a96c9ee71c5b8b2dba7167996be8a37f 692 SUPERFAMILY SSF52540 507 652 1.17E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13250 5bca8d6f05b3cbe9a62b0a9edeb5b810 555 Pfam PF00733 Asparagine synthase 212 366 5.8E-58 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 LK04_RS13250 5bca8d6f05b3cbe9a62b0a9edeb5b810 555 Pfam PF00733 Asparagine synthase 367 512 1.7E-39 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 LK04_RS13250 5bca8d6f05b3cbe9a62b0a9edeb5b810 555 SUPERFAMILY SSF56235 1 196 7.46E-59 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS13250 5bca8d6f05b3cbe9a62b0a9edeb5b810 555 SUPERFAMILY SSF52402 208 484 7.54E-75 T 22-04-2016 LK04_RS13250 5bca8d6f05b3cbe9a62b0a9edeb5b810 555 Gene3D G3DSA:3.60.20.10 1 192 2.3E-69 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS13250 5bca8d6f05b3cbe9a62b0a9edeb5b810 555 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 1.5E-121 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 LK04_RS13250 5bca8d6f05b3cbe9a62b0a9edeb5b810 555 PANTHER PTHR11772:SF11 2 539 3.8E-297 T 22-04-2016 LK04_RS13250 5bca8d6f05b3cbe9a62b0a9edeb5b810 555 Gene3D G3DSA:3.40.50.620 193 510 2.2E-118 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS13250 5bca8d6f05b3cbe9a62b0a9edeb5b810 555 Pfam PF13537 Glutamine amidotransferase domain 48 166 3.5E-42 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain LK04_RS13250 5bca8d6f05b3cbe9a62b0a9edeb5b810 555 PANTHER PTHR11772 2 539 3.8E-297 T 22-04-2016 LK04_RS17115 32967778d069d39158f8dd498f1ffffe 349 Gene3D G3DSA:2.130.10.10 62 327 2.4E-37 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LK04_RS17115 32967778d069d39158f8dd498f1ffffe 349 SUPERFAMILY SSF51004 40 329 7.72E-39 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain LK04_RS01940 4fbc7f4e542d8cd4b203a54dc13f3112 436 SUPERFAMILY SSF55154 1 218 6.05E-54 T 22-04-2016 IPR033469 CYTH-like domain LK04_RS01940 4fbc7f4e542d8cd4b203a54dc13f3112 436 PANTHER PTHR39569 2 436 7.5E-112 T 22-04-2016 LK04_RS01940 4fbc7f4e542d8cd4b203a54dc13f3112 436 SMART SM01118 2 202 1.7E-39 T 22-04-2016 IPR023577 CYTH domain LK04_RS01940 4fbc7f4e542d8cd4b203a54dc13f3112 436 Gene3D G3DSA:2.40.320.10 1 208 5.6E-41 T 22-04-2016 IPR023577 CYTH domain LK04_RS01940 4fbc7f4e542d8cd4b203a54dc13f3112 436 Pfam PF01928 CYTH domain 3 196 1.7E-33 T 22-04-2016 IPR023577 CYTH domain LK04_RS01940 4fbc7f4e542d8cd4b203a54dc13f3112 436 PANTHER PTHR39569:SF1 2 436 7.5E-112 T 22-04-2016 LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 126 2.5E-46 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 SUPERFAMILY SSF55811 1 126 2.17E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 Gene3D G3DSA:3.90.79.10 4 127 6.8E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 PANTHER PTHR22769 1 127 4.3E-57 T 22-04-2016 LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 Pfam PF00293 NUDIX domain 5 125 3.4E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 PANTHER PTHR22769:SF36 1 127 4.3E-57 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 PRINTS PR00502 NUDIX hydrolase family signature 33 47 4.0E-9 T 22-04-2016 IPR020476 NUDIX hydrolase LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 PRINTS PR00502 NUDIX hydrolase family signature 47 62 4.0E-9 T 22-04-2016 IPR020476 NUDIX hydrolase LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 PRINTS PR01401 Mutator MutT protein signature 77 90 2.3E-9 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 LK04_RS15360 9509e4e2dc23b7505f41a0eaa085f6a5 131 PRINTS PR01401 Mutator MutT protein signature 2 23 2.3E-9 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 LK04_RS18755 32ba8d2335146c38caf373862715b1c0 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.736 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LK04_RS18755 32ba8d2335146c38caf373862715b1c0 119 Gene3D G3DSA:3.30.230.10 5 116 2.6E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS18755 32ba8d2335146c38caf373862715b1c0 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 2.0E-44 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LK04_RS18755 32ba8d2335146c38caf373862715b1c0 119 PANTHER PTHR33992 2 116 1.1E-42 T 22-04-2016 LK04_RS18755 32ba8d2335146c38caf373862715b1c0 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 LK04_RS18755 32ba8d2335146c38caf373862715b1c0 119 SUPERFAMILY SSF54211 5 115 1.37E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS18755 32ba8d2335146c38caf373862715b1c0 119 Pfam PF00825 Ribonuclease P 6 111 7.1E-33 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LK04_RS18755 32ba8d2335146c38caf373862715b1c0 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 2.5E-37 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LK04_RS18705 b295106ad1aaf1134a0b3f550f22bc22 219 Gene3D G3DSA:1.10.150.240 19 82 2.0E-4 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LK04_RS18705 b295106ad1aaf1134a0b3f550f22bc22 219 PANTHER PTHR18901 1 218 5.0E-49 T 22-04-2016 LK04_RS18705 b295106ad1aaf1134a0b3f550f22bc22 219 Gene3D G3DSA:3.40.50.1000 87 211 3.4E-32 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18705 b295106ad1aaf1134a0b3f550f22bc22 219 Gene3D G3DSA:3.40.50.1000 2 18 3.4E-32 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18705 b295106ad1aaf1134a0b3f550f22bc22 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 182 5.9E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS18705 b295106ad1aaf1134a0b3f550f22bc22 219 SUPERFAMILY SSF56784 3 211 4.65E-44 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18705 b295106ad1aaf1134a0b3f550f22bc22 219 PANTHER PTHR18901:SF2 1 218 5.0E-49 T 22-04-2016 LK04_RS18705 b295106ad1aaf1134a0b3f550f22bc22 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 182 1.8E-22 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13775 937b3558d5aba92d6f50928b80c6df69 319 Gene3D G3DSA:3.40.50.1400 3 200 8.1E-63 T 22-04-2016 LK04_RS13775 937b3558d5aba92d6f50928b80c6df69 319 SUPERFAMILY SSF53800 4 317 2.83E-96 T 22-04-2016 LK04_RS13775 937b3558d5aba92d6f50928b80c6df69 319 ProSitePatterns PS00534 Ferrochelatase signature. 188 206 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LK04_RS13775 937b3558d5aba92d6f50928b80c6df69 319 Gene3D G3DSA:3.40.50.1400 201 318 1.3E-31 T 22-04-2016 LK04_RS13775 937b3558d5aba92d6f50928b80c6df69 319 PANTHER PTHR11108 1 315 8.8E-124 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LK04_RS13775 937b3558d5aba92d6f50928b80c6df69 319 Hamap MF_00323 Ferrochelatase [hemH]. 4 319 36.31 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LK04_RS13775 937b3558d5aba92d6f50928b80c6df69 319 TIGRFAM TIGR00109 hemH: ferrochelatase 1 318 3.3E-108 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LK04_RS13775 937b3558d5aba92d6f50928b80c6df69 319 Pfam PF00762 Ferrochelatase 6 317 3.5E-101 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LK04_RS01740 a8997b93aec7606bfb8a721096ff9638 439 Pfam PF02447 GntP family permease 1 436 3.2E-178 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS01740 a8997b93aec7606bfb8a721096ff9638 439 PANTHER PTHR30354 1 439 4.1E-226 T 22-04-2016 LK04_RS01740 a8997b93aec7606bfb8a721096ff9638 439 PANTHER PTHR30354:SF1 1 439 4.1E-226 T 22-04-2016 LK04_RS01740 a8997b93aec7606bfb8a721096ff9638 439 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 9.7E-192 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS01740 a8997b93aec7606bfb8a721096ff9638 439 PIRSF PIRSF002746 1 439 2.5E-158 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS07120 df3ac8b44a9512cc89477aadfe99e85b 262 PANTHER PTHR30473 1 262 1.4E-213 T 22-04-2016 LK04_RS07120 df3ac8b44a9512cc89477aadfe99e85b 262 Pfam PF02562 PhoH-like protein 57 261 2.8E-77 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 LK04_RS07120 df3ac8b44a9512cc89477aadfe99e85b 262 Gene3D G3DSA:3.40.50.300 56 261 5.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07120 df3ac8b44a9512cc89477aadfe99e85b 262 PANTHER PTHR30473:SF3 1 262 1.4E-213 T 22-04-2016 LK04_RS07120 df3ac8b44a9512cc89477aadfe99e85b 262 SUPERFAMILY SSF52540 56 239 3.69E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 PRINTS PR01035 Tetracycline resistance protein signature 28 44 9.8E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 PRINTS PR01035 Tetracycline resistance protein signature 90 114 9.8E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 PRINTS PR01035 Tetracycline resistance protein signature 147 169 9.8E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 PRINTS PR01035 Tetracycline resistance protein signature 289 310 9.8E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 PRINTS PR01035 Tetracycline resistance protein signature 350 373 9.8E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 PRINTS PR01035 Tetracycline resistance protein signature 117 138 9.8E-14 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 PANTHER PTHR23504:SF14 3 398 3.2E-78 T 22-04-2016 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 Pfam PF00083 Sugar (and other) transporter 258 352 9.7E-7 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 Gene3D G3DSA:1.20.1250.20 16 206 1.4E-37 T 22-04-2016 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 Gene3D G3DSA:1.20.1250.20 221 401 1.3E-29 T 22-04-2016 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 Pfam PF07690 Major Facilitator Superfamily 23 247 3.2E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 SUPERFAMILY SSF103473 13 402 8.72E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS17025 0db7cd7aaa1dde69f8a96a8d5d55fd9d 403 PANTHER PTHR23504 3 398 3.2E-78 T 22-04-2016 LK04_RS12515 634280807fc136a3884489d3a2240e2d 242 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 117 4.6E-21 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS12515 634280807fc136a3884489d3a2240e2d 242 Gene3D G3DSA:1.10.3720.10 16 224 1.1E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12515 634280807fc136a3884489d3a2240e2d 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 223 6.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12515 634280807fc136a3884489d3a2240e2d 242 SUPERFAMILY SSF161098 16 208 3.66E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12515 634280807fc136a3884489d3a2240e2d 242 PANTHER PTHR30614 1 228 7.7E-72 T 22-04-2016 LK04_RS00955 121111cb045cb140a4157278b949a15d 166 SUPERFAMILY SSF54768 9 76 4.6E-24 T 22-04-2016 LK04_RS00955 121111cb045cb140a4157278b949a15d 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site LK04_RS00955 121111cb045cb140a4157278b949a15d 166 Gene3D G3DSA:3.30.160.20 10 72 6.9E-31 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LK04_RS00955 121111cb045cb140a4157278b949a15d 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.87 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 LK04_RS00955 121111cb045cb140a4157278b949a15d 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.5E-29 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS00955 121111cb045cb140a4157278b949a15d 166 Gene3D G3DSA:3.30.230.10 77 159 6.3E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS00955 121111cb045cb140a4157278b949a15d 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 8.6E-71 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 LK04_RS00955 121111cb045cb140a4157278b949a15d 166 SUPERFAMILY SSF54211 79 159 6.07E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS00955 121111cb045cb140a4157278b949a15d 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 6.0E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 LK04_RS00955 121111cb045cb140a4157278b949a15d 166 PANTHER PTHR13718 10 164 4.3E-81 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 Pfam PF00702 haloacid dehalogenase-like hydrolase 373 662 1.4E-21 T 22-04-2016 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 Pfam PF00689 Cation transporting ATPase, C-terminus 731 898 1.7E-16 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 Pfam PF00122 E1-E2 ATPase 120 368 1.4E-55 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PRINTS PR01836 Magnesium-transporting ATPase signature 776 792 4.3E-87 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PRINTS PR01836 Magnesium-transporting ATPase signature 724 735 4.3E-87 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PRINTS PR01836 Magnesium-transporting ATPase signature 811 832 4.3E-87 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PRINTS PR01836 Magnesium-transporting ATPase signature 290 306 4.3E-87 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PRINTS PR01836 Magnesium-transporting ATPase signature 756 769 4.3E-87 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PRINTS PR01836 Magnesium-transporting ATPase signature 706 721 4.3E-87 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PRINTS PR01836 Magnesium-transporting ATPase signature 411 424 4.3E-87 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PRINTS PR01836 Magnesium-transporting ATPase signature 307 326 4.3E-87 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PRINTS PR01836 Magnesium-transporting ATPase signature 861 882 4.3E-87 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 SUPERFAMILY SSF56784 375 395 1.2E-38 T 22-04-2016 IPR023214 HAD-like domain LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 SUPERFAMILY SSF56784 502 746 1.2E-38 T 22-04-2016 IPR023214 HAD-like domain LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 600 737 1.7E-30 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 272 394 1.5E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 379 385 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 SUPERFAMILY SSF81665 278 371 2.75E-101 T 22-04-2016 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 SUPERFAMILY SSF81665 35 153 2.75E-101 T 22-04-2016 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 SUPERFAMILY SSF81665 697 905 2.75E-101 T 22-04-2016 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 Gene3D G3DSA:3.40.1110.10 369 555 6.0E-29 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 Pfam PF00690 Cation transporter/ATPase, N-terminus 36 99 6.9E-15 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 SUPERFAMILY SSF81653 168 277 5.62E-25 T 22-04-2016 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 Gene3D G3DSA:2.70.150.10 48 83 2.0E-36 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 Gene3D G3DSA:2.70.150.10 148 278 2.0E-36 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PANTHER PTHR24093 21 907 0.0 T 22-04-2016 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 SMART SM00831 31 104 1.4E-20 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 Gene3D G3DSA:1.20.1110.10 84 147 4.3E-67 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 Gene3D G3DSA:1.20.1110.10 617 899 4.3E-67 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 35 907 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03895 f61a84d447fecfd41f28b3627ad8a5a6 908 PANTHER PTHR24093:SF128 21 907 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LK04_RS03765 62eb42a6af7ebc799196dde3401afaf4 139 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LK04_RS03765 62eb42a6af7ebc799196dde3401afaf4 139 PANTHER PTHR10438:SF266 16 139 3.2E-58 T 22-04-2016 LK04_RS03765 62eb42a6af7ebc799196dde3401afaf4 139 Gene3D G3DSA:3.40.30.10 31 138 8.1E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS03765 62eb42a6af7ebc799196dde3401afaf4 139 SUPERFAMILY SSF52833 26 137 3.41E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS03765 62eb42a6af7ebc799196dde3401afaf4 139 Pfam PF00085 Thioredoxin 37 137 9.7E-27 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 LK04_RS03765 62eb42a6af7ebc799196dde3401afaf4 139 PANTHER PTHR10438 16 139 3.2E-58 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LK04_RS03765 62eb42a6af7ebc799196dde3401afaf4 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 44 138 1.6E-34 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LK04_RS03765 62eb42a6af7ebc799196dde3401afaf4 139 PRINTS PR00421 Thioredoxin family signature 63 72 3.9E-8 T 22-04-2016 LK04_RS03765 62eb42a6af7ebc799196dde3401afaf4 139 PRINTS PR00421 Thioredoxin family signature 55 63 3.9E-8 T 22-04-2016 LK04_RS03765 62eb42a6af7ebc799196dde3401afaf4 139 PRINTS PR00421 Thioredoxin family signature 103 114 3.9E-8 T 22-04-2016 LK04_RS11045 794229be3dfb929c44c14ec7457ea686 203 SUPERFAMILY SSF53955 41 202 5.07E-27 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS11045 794229be3dfb929c44c14ec7457ea686 203 PANTHER PTHR21666:SF216 22 202 5.0E-86 T 22-04-2016 LK04_RS11045 794229be3dfb929c44c14ec7457ea686 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 59 87 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LK04_RS11045 794229be3dfb929c44c14ec7457ea686 203 Pfam PF01464 Transglycosylase SLT domain 43 165 3.3E-26 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 LK04_RS11045 794229be3dfb929c44c14ec7457ea686 203 PANTHER PTHR21666 22 202 5.0E-86 T 22-04-2016 LK04_RS11045 794229be3dfb929c44c14ec7457ea686 203 Gene3D G3DSA:1.10.530.10 38 201 1.6E-31 T 22-04-2016 LK04_RS11735 a384f1e2536148fd176698bca406cddd 236 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 14 236 58.702 T 22-04-2016 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 LK04_RS11735 a384f1e2536148fd176698bca406cddd 236 PANTHER PTHR11080:SF19 6 235 2.9E-83 T 22-04-2016 LK04_RS11735 a384f1e2536148fd176698bca406cddd 236 SUPERFAMILY SSF52499 8 234 3.79E-55 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS11735 a384f1e2536148fd176698bca406cddd 236 PANTHER PTHR11080 6 235 2.9E-83 T 22-04-2016 LK04_RS11735 a384f1e2536148fd176698bca406cddd 236 Pfam PF00857 Isochorismatase family 31 228 1.7E-39 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS11735 a384f1e2536148fd176698bca406cddd 236 Gene3D G3DSA:3.40.50.850 8 235 9.7E-63 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS11735 a384f1e2536148fd176698bca406cddd 236 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 16 235 6.1E-132 T 22-04-2016 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 LK04_RS01395 42334811078ee0053795f3b60da83110 643 SMART SM00283 393 640 2.7E-76 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS01395 42334811078ee0053795f3b60da83110 643 Pfam PF17201 Cache 3/Cache 2 fusion domain 36 316 2.9E-70 T 22-04-2016 IPR033462 Cache 3/Cache 2 fusion domain LK04_RS01395 42334811078ee0053795f3b60da83110 643 SUPERFAMILY SSF58104 360 641 1.83E-63 T 22-04-2016 LK04_RS01395 42334811078ee0053795f3b60da83110 643 Gene3D G3DSA:3.30.450.20 187 317 7.6E-11 T 22-04-2016 LK04_RS01395 42334811078ee0053795f3b60da83110 643 Gene3D G3DSA:1.10.287.950 408 610 1.3E-52 T 22-04-2016 LK04_RS01395 42334811078ee0053795f3b60da83110 643 PANTHER PTHR32089 132 643 1.5E-111 T 22-04-2016 LK04_RS01395 42334811078ee0053795f3b60da83110 643 SUPERFAMILY SSF103190 116 212 1.96E-10 T 22-04-2016 IPR029151 Periplasmic sensor domain-like LK04_RS01395 42334811078ee0053795f3b60da83110 643 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 456 639 1.2E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS01395 42334811078ee0053795f3b60da83110 643 SMART SM00304 340 392 2.6E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS01395 42334811078ee0053795f3b60da83110 643 Pfam PF00672 HAMP domain 321 387 2.9E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS06545 5ba54591f4b8ae43a49a6b9a0ace0541 489 PANTHER PTHR11699 11 489 2.2E-179 T 22-04-2016 LK04_RS06545 5ba54591f4b8ae43a49a6b9a0ace0541 489 Pfam PF00171 Aldehyde dehydrogenase family 23 485 7.5E-143 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS06545 5ba54591f4b8ae43a49a6b9a0ace0541 489 Gene3D G3DSA:3.40.309.10 272 451 9.6E-54 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS06545 5ba54591f4b8ae43a49a6b9a0ace0541 489 Gene3D G3DSA:3.40.605.10 12 271 1.6E-87 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS06545 5ba54591f4b8ae43a49a6b9a0ace0541 489 SUPERFAMILY SSF53720 11 488 2.23E-144 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS06545 5ba54591f4b8ae43a49a6b9a0ace0541 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LK04_RS09060 17fab6a3090045e706c22751004a018a 237 Pfam PF04982 HPP family 58 177 2.2E-38 T 22-04-2016 IPR007065 HPP LK04_RS09060 17fab6a3090045e706c22751004a018a 237 PANTHER PTHR33741 1 177 2.2E-24 T 22-04-2016 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 Gene3D G3DSA:1.10.260.40 6 66 3.5E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 2.2E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 2.2E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 Gene3D G3DSA:3.40.50.2300 177 328 7.6E-52 T 22-04-2016 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 Pfam PF13377 Periplasmic binding protein-like domain 171 327 7.9E-37 T 22-04-2016 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 4.6E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 Gene3D G3DSA:3.40.50.2300 67 176 4.4E-26 T 22-04-2016 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 SMART SM00354 5 75 2.3E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 PANTHER PTHR30146 4 351 7.1E-122 T 22-04-2016 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 SUPERFAMILY SSF53822 64 330 2.86E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 SUPERFAMILY SSF47413 6 60 3.58E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06340 a32b3a3c85cd38372ee7733b89bd764f 355 PANTHER PTHR30146:SF34 4 351 7.1E-122 T 22-04-2016 LK04_RS09200 576626ca000fe1756774f8a68821d00c 447 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 1.3E-150 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 LK04_RS09200 576626ca000fe1756774f8a68821d00c 447 PANTHER PTHR35566 1 447 7.5E-142 T 22-04-2016 LK04_RS09200 576626ca000fe1756774f8a68821d00c 447 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 6.7E-141 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 LK04_RS09200 576626ca000fe1756774f8a68821d00c 447 PANTHER PTHR35566:SF1 1 447 7.5E-142 T 22-04-2016 LK04_RS18320 523a02b2e6e9a138792d1b53adce6fec 266 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 245 4.6E-57 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ LK04_RS18320 523a02b2e6e9a138792d1b53adce6fec 266 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 244 1.4E-38 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ LK04_RS18320 523a02b2e6e9a138792d1b53adce6fec 266 PANTHER PTHR13696 1 257 2.1E-30 T 22-04-2016 LK04_RS18320 523a02b2e6e9a138792d1b53adce6fec 266 SUPERFAMILY SSF52540 2 249 3.29E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18320 523a02b2e6e9a138792d1b53adce6fec 266 Gene3D G3DSA:3.40.50.300 2 249 1.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17555 3f1196e0601f119c55fccfd606d0906a 185 Gene3D G3DSA:3.40.1000.10 51 184 1.6E-7 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich LK04_RS17555 3f1196e0601f119c55fccfd606d0906a 185 Pfam PF08786 Domain of unknown function (DUF1795) 51 181 2.4E-32 T 22-04-2016 IPR014894 Protein DcrB LK04_RS12875 661bca3c3d4fe35ee963296f1b039fc4 223 PANTHER PTHR21343 1 221 8.2E-118 T 22-04-2016 LK04_RS12875 661bca3c3d4fe35ee963296f1b039fc4 223 Pfam PF13500 AAA domain 5 209 9.4E-40 T 22-04-2016 LK04_RS12875 661bca3c3d4fe35ee963296f1b039fc4 223 SUPERFAMILY SSF52540 1 211 4.64E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12875 661bca3c3d4fe35ee963296f1b039fc4 223 PANTHER PTHR21343:SF13 1 221 8.2E-118 T 22-04-2016 LK04_RS12875 661bca3c3d4fe35ee963296f1b039fc4 223 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 175 6.8E-63 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS12875 661bca3c3d4fe35ee963296f1b039fc4 223 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 211 30.909 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS12875 661bca3c3d4fe35ee963296f1b039fc4 223 PIRSF PIRSF006755 1 221 1.4E-84 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS12875 661bca3c3d4fe35ee963296f1b039fc4 223 Gene3D G3DSA:3.40.50.300 2 214 3.3E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04525 2bc50f9456adc4d147e7e575f306d533 297 SUPERFAMILY SSF53067 4 294 4.15E-43 T 22-04-2016 LK04_RS04525 2bc50f9456adc4d147e7e575f306d533 297 Pfam PF00480 ROK family 6 290 2.6E-53 T 22-04-2016 IPR000600 ROK family LK04_RS04525 2bc50f9456adc4d147e7e575f306d533 297 Gene3D G3DSA:3.30.420.40 3 140 1.3E-25 T 22-04-2016 LK04_RS04525 2bc50f9456adc4d147e7e575f306d533 297 Gene3D G3DSA:3.30.420.40 141 276 1.8E-33 T 22-04-2016 LK04_RS04525 2bc50f9456adc4d147e7e575f306d533 297 PANTHER PTHR18964:SF123 1 286 1.5E-38 T 22-04-2016 LK04_RS04525 2bc50f9456adc4d147e7e575f306d533 297 PANTHER PTHR18964 1 286 1.5E-38 T 22-04-2016 LK04_RS03560 3a911210d99182073b0aa10414c17d12 258 Gene3D G3DSA:3.40.50.150 3 182 5.5E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS03560 3a911210d99182073b0aa10414c17d12 258 Gene3D G3DSA:1.10.150.290 183 237 4.2E-29 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 LK04_RS03560 3a911210d99182073b0aa10414c17d12 258 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 257 43.706 T 22-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 LK04_RS03560 3a911210d99182073b0aa10414c17d12 258 Pfam PF13649 Methyltransferase domain 37 124 7.2E-14 T 22-04-2016 LK04_RS03560 3a911210d99182073b0aa10414c17d12 258 PANTHER PTHR10108 3 235 4.6E-73 T 22-04-2016 LK04_RS03560 3a911210d99182073b0aa10414c17d12 258 PANTHER PTHR10108:SF890 3 235 4.6E-73 T 22-04-2016 LK04_RS03560 3a911210d99182073b0aa10414c17d12 258 SUPERFAMILY SSF53335 3 210 1.99E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS06235 1cc0049b7bc85394679aaa5e4353470e 275 Gene3D G3DSA:3.90.25.10 194 266 4.7E-5 T 22-04-2016 LK04_RS06235 1cc0049b7bc85394679aaa5e4353470e 275 PANTHER PTHR10366:SF289 3 267 2.1E-61 T 22-04-2016 LK04_RS06235 1cc0049b7bc85394679aaa5e4353470e 275 Gene3D G3DSA:3.40.50.720 2 91 9.6E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06235 1cc0049b7bc85394679aaa5e4353470e 275 SUPERFAMILY SSF51735 1 267 8.63E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06235 1cc0049b7bc85394679aaa5e4353470e 275 Gene3D G3DSA:3.40.50.720 92 193 8.5E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06235 1cc0049b7bc85394679aaa5e4353470e 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 3.9E-9 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LK04_RS06235 1cc0049b7bc85394679aaa5e4353470e 275 PANTHER PTHR10366 3 267 2.1E-61 T 22-04-2016 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 PANTHER PTHR21499 2 449 2.4E-145 T 22-04-2016 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 Pfam PF00696 Amino acid kinase family 5 278 1.7E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 SUPERFAMILY SSF55021 298 394 6.41E-17 T 22-04-2016 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 5 449 5.6E-133 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 PIRSF PIRSF000726 3 451 1.9E-150 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 Gene3D G3DSA:3.40.1160.10 4 54 1.2E-61 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 Gene3D G3DSA:3.40.1160.10 107 295 1.2E-61 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 PANTHER PTHR21499:SF3 2 449 2.4E-145 T 22-04-2016 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 SUPERFAMILY SSF53633 5 293 6.55E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 SUPERFAMILY SSF55021 378 449 2.63E-14 T 22-04-2016 LK04_RS17625 1390ec69859a0a0d190719edefec008a 451 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 449 1.3E-141 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 SUPERFAMILY SSF82693 135 182 1.01E-28 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 SUPERFAMILY SSF82693 274 330 1.01E-28 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 SUPERFAMILY SSF82866 807 1032 1.44E-44 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 SUPERFAMILY SSF82693 566 670 6.8E-33 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PANTHER PTHR32063:SF13 1 1048 0.0 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 SUPERFAMILY SSF82866 296 497 8.76E-48 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1045 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 Gene3D G3DSA:3.30.70.1430 568 670 8.3E-39 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 Gene3D G3DSA:3.30.2090.10 181 275 8.5E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.5E-114 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.5E-114 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.5E-114 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.5E-114 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.5E-114 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.5E-114 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.5E-114 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.5E-114 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.5E-114 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 Gene3D G3DSA:3.30.70.1430 38 139 3.0E-34 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 SUPERFAMILY SSF82714 724 811 1.2E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 SUPERFAMILY SSF82693 38 132 8.89E-26 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 SUPERFAMILY SSF82714 182 271 8.24E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 Gene3D G3DSA:1.10.3850.10 816 1030 5.9E-56 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 Gene3D G3DSA:1.10.3850.10 278 498 2.2E-60 T 22-04-2016 LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 Gene3D G3DSA:3.30.2090.10 723 811 3.2E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS13845 aa45d9aa491b683b197340868c84de05 1049 PANTHER PTHR32063 1 1048 0.0 T 22-04-2016 LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 610 1.2E-238 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 Gene3D G3DSA:3.90.226.10 470 552 1.4E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 Gene3D G3DSA:3.90.226.10 220 316 6.4E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 Gene3D G3DSA:3.90.226.10 26 177 6.4E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 Gene3D G3DSA:3.90.226.10 323 433 1.4E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 PANTHER PTHR33209 1 615 3.4E-224 T 22-04-2016 LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 SUPERFAMILY SSF52096 469 531 9.52E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 SUPERFAMILY SSF52096 320 441 9.52E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 PIRSF PIRSF001217 8 619 9.2E-215 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 SUPERFAMILY SSF52096 54 181 1.1E-27 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 SUPERFAMILY SSF52096 212 285 1.1E-27 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 328 542 1.7E-51 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 Pfam PF01343 Peptidase family S49 393 543 2.2E-48 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 Pfam PF01343 Peptidase family S49 141 293 1.7E-39 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 LK04_RS08005 af7ac7303f9de689e7a614640b0b3fc7 619 PANTHER PTHR33209:SF1 1 615 3.4E-224 T 22-04-2016 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 Gene3D G3DSA:3.40.50.720 8 182 4.5E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 SUPERFAMILY SSF51735 8 182 1.14E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 SUPERFAMILY SSF48179 184 335 4.76E-56 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 Gene3D G3DSA:1.10.1040.10 184 330 1.4E-57 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 PIRSF PIRSF000114 1 336 1.6E-100 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 PANTHER PTHR11728 8 335 2.4E-143 T 22-04-2016 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 2.2E-52 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 163 2.1E-50 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 37.969 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 6.6E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 6.6E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 6.6E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 6.6E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 6.6E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS19505 27a1ce56b192434f63d4383df11610af 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 6.6E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LK04_RS16555 19e14672070e44899b4f3a2479c431a1 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LK04_RS16555 19e14672070e44899b4f3a2479c431a1 323 PANTHER PTHR12001 8 323 3.1E-126 T 22-04-2016 IPR017446 Polyprenyl synthetase-related LK04_RS16555 19e14672070e44899b4f3a2479c431a1 323 Gene3D G3DSA:1.10.600.10 3 322 2.3E-101 T 22-04-2016 IPR008949 Isoprenoid synthase domain LK04_RS16555 19e14672070e44899b4f3a2479c431a1 323 Pfam PF00348 Polyprenyl synthetase 31 261 1.4E-74 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LK04_RS16555 19e14672070e44899b4f3a2479c431a1 323 SUPERFAMILY SSF48576 5 322 4.03E-98 T 22-04-2016 IPR008949 Isoprenoid synthase domain LK04_RS16555 19e14672070e44899b4f3a2479c431a1 323 PANTHER PTHR12001:SF47 8 323 3.1E-126 T 22-04-2016 LK04_RS16555 19e14672070e44899b4f3a2479c431a1 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 PANTHER PTHR20857:SF19 10 259 1.3E-81 T 22-04-2016 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 19 261 30.773 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 125 139 1.1E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 69 77 1.1E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 95 112 1.1E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 25 32 1.1E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 38 59 1.1E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 169 186 1.1E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 SUPERFAMILY SSF53613 15 257 4.37E-61 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 17 258 2.2E-88 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 Gene3D G3DSA:3.40.1190.20 12 258 2.3E-83 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 Pfam PF02110 Hydroxyethylthiazole kinase family 17 259 1.4E-93 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 PIRSF PIRSF000513 11 262 2.0E-94 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS05920 c655248d508d2e9fc992bf9dc45aeffe 262 PANTHER PTHR20857 10 259 1.3E-81 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 SUPERFAMILY SSF82866 798 1016 1.7E-40 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PANTHER PTHR32063 1 1029 0.0 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PANTHER PTHR32063:SF34 1 1029 0.0 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 SUPERFAMILY SSF82714 183 266 1.23E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 SUPERFAMILY SSF82693 136 182 2.96E-20 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 SUPERFAMILY SSF82693 268 324 2.96E-20 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 SUPERFAMILY SSF82693 558 654 1.18E-15 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.1E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.1E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 4.1E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.1E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 4.1E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 4.1E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 4.1E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.1E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.1E-75 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 SUPERFAMILY SSF82866 290 490 2.09E-47 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 Gene3D G3DSA:3.30.2090.10 183 264 1.5E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 Gene3D G3DSA:3.30.2090.10 710 790 3.5E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 Gene3D G3DSA:1.10.3850.10 276 492 1.5E-57 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 Gene3D G3DSA:1.10.3850.10 801 1016 1.1E-51 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 SUPERFAMILY SSF82693 40 126 1.46E-22 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 Gene3D G3DSA:3.30.70.1430 561 652 1.4E-13 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 Pfam PF00873 AcrB/AcrD/AcrF family 4 1014 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 Gene3D G3DSA:3.30.70.1430 40 141 1.8E-28 T 22-04-2016 LK04_RS03160 186c4f76edbcae1c0a26b3be4d3f279a 1033 SUPERFAMILY SSF82714 709 790 6.8E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 2.5E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 2.5E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 2.5E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 2.5E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 513 1.1E-57 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 173 3.6E-22 T 22-04-2016 IPR024478 4HB MCP domain LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 PANTHER PTHR32089:SF63 89 517 3.0E-151 T 22-04-2016 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 Gene3D G3DSA:1.10.287.950 282 486 8.5E-58 T 22-04-2016 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 SMART SM00304 214 266 1.7E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 SUPERFAMILY SSF58104 234 515 6.28E-71 T 22-04-2016 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 SMART SM00283 267 514 1.3E-81 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 PANTHER PTHR32089 89 517 3.0E-151 T 22-04-2016 LK04_RS14440 bab4cb382d028c59fdb256a006af6c51 518 Pfam PF00672 HAMP domain 195 261 8.3E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.695 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 Gene3D G3DSA:3.40.50.920 494 619 6.4E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 SUPERFAMILY SSF52922 492 619 1.7E-30 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 PANTHER PTHR11624:SF20 24 218 0.0 T 22-04-2016 LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 PANTHER PTHR11624:SF20 241 621 0.0 T 22-04-2016 LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 SMART SM00861 319 484 1.7E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 Gene3D G3DSA:3.40.50.970 335 484 2.6E-34 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 PANTHER PTHR11624 24 218 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 PANTHER PTHR11624 241 621 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 Gene3D G3DSA:3.40.50.970 26 201 5.0E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 Gene3D G3DSA:3.40.50.970 242 334 5.0E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 SUPERFAMILY SSF52518 317 504 2.59E-56 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 15 282 1.7E-115 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 SUPERFAMILY SSF52518 243 381 5.37E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 SUPERFAMILY SSF52518 22 199 5.37E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 13 620 3.7E-304 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 2.3E-39 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS14080 6c47d28f439f065a96ac1ef2489eecd5 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.6E-26 T 22-04-2016 IPR033248 Transketolase, C-terminal domain LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 Gene3D G3DSA:3.40.50.2300 58 166 4.3E-47 T 22-04-2016 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 SUPERFAMILY SSF53822 61 331 3.14E-78 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.6E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.5E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.5E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 PANTHER PTHR30146:SF55 1 333 4.6E-192 T 22-04-2016 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.1E-33 T 22-04-2016 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 Gene3D G3DSA:3.40.50.2300 167 330 2.5E-49 T 22-04-2016 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 SUPERFAMILY SSF47413 1 59 1.03E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 SMART SM00354 1 71 1.2E-35 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 PANTHER PTHR30146 1 333 4.6E-192 T 22-04-2016 LK04_RS05840 38b1be82295d636f5955dedb4680cf67 346 Gene3D G3DSA:1.10.260.40 2 57 3.5E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 PANTHER PTHR10314:SF30 1 368 5.8E-195 T 22-04-2016 LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 1.2E-30 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 2.4E-23 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 5.8E-260 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 Gene3D G3DSA:3.40.1020.10 339 512 4.4E-56 T 22-04-2016 LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 SUPERFAMILY SSF53686 15 365 3.01E-100 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 Gene3D G3DSA:3.40.50.1100 80 332 9.2E-78 T 22-04-2016 LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 PANTHER PTHR10314 1 368 5.8E-195 T 22-04-2016 LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 SUPERFAMILY SSF55021 336 423 2.29E-29 T 22-04-2016 LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 3.8E-77 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS19790 bea6a2835b18cdf6490e5e5316514144 515 SUPERFAMILY SSF55021 420 512 1.01E-24 T 22-04-2016 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 PANTHER PTHR30203:SF7 1 463 4.3E-129 T 22-04-2016 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 461 1.2E-122 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 SUPERFAMILY SSF56954 1 463 1.05E-106 T 22-04-2016 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 Gene3D G3DSA:1.20.1600.10 54 91 3.7E-90 T 22-04-2016 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 Gene3D G3DSA:1.20.1600.10 140 310 3.7E-90 T 22-04-2016 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 Gene3D G3DSA:1.20.1600.10 348 462 3.7E-90 T 22-04-2016 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 Pfam PF02321 Outer membrane efflux protein 275 459 5.5E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 Pfam PF02321 Outer membrane efflux protein 71 252 6.3E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 PANTHER PTHR30203 1 463 4.3E-129 T 22-04-2016 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 Gene3D G3DSA:2.20.200.10 311 343 1.1E-16 T 22-04-2016 LK04_RS03165 bc2229dacb7259ac7d169802ba914dfa 464 Gene3D G3DSA:2.20.200.10 101 139 1.1E-16 T 22-04-2016 LK04_RS14030 c573d13b65ae92231d9efc447185ac7c 454 Gene3D G3DSA:1.20.1250.20 13 193 1.4E-33 T 22-04-2016 LK04_RS14030 c573d13b65ae92231d9efc447185ac7c 454 Gene3D G3DSA:1.20.1250.20 211 392 1.5E-24 T 22-04-2016 LK04_RS14030 c573d13b65ae92231d9efc447185ac7c 454 SUPERFAMILY SSF103473 1 389 4.71E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS14030 c573d13b65ae92231d9efc447185ac7c 454 PANTHER PTHR23510:SF6 1 400 4.3E-250 T 22-04-2016 LK04_RS14030 c573d13b65ae92231d9efc447185ac7c 454 Pfam PF07690 Major Facilitator Superfamily 20 354 5.6E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS14030 c573d13b65ae92231d9efc447185ac7c 454 PANTHER PTHR23510 1 400 4.3E-250 T 22-04-2016 LK04_RS13930 f9f119e7500886d73a003423076ba616 346 PANTHER PTHR10314:SF126 1 343 6.4E-193 T 22-04-2016 LK04_RS13930 f9f119e7500886d73a003423076ba616 346 SUPERFAMILY SSF53686 12 332 1.01E-68 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS13930 f9f119e7500886d73a003423076ba616 346 Gene3D G3DSA:3.40.50.1100 142 331 2.1E-35 T 22-04-2016 LK04_RS13930 f9f119e7500886d73a003423076ba616 346 Gene3D G3DSA:3.40.50.1100 47 141 1.9E-22 T 22-04-2016 LK04_RS13930 f9f119e7500886d73a003423076ba616 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 313 2.6E-43 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS13930 f9f119e7500886d73a003423076ba616 346 PANTHER PTHR10314 1 343 6.4E-193 T 22-04-2016 LK04_RS08235 7b92169a3586c4de2a4f54a585d9f9e0 348 PANTHER PTHR33209:SF2 1 348 1.0E-192 T 22-04-2016 LK04_RS08235 7b92169a3586c4de2a4f54a585d9f9e0 348 Pfam PF01343 Peptidase family S49 160 304 7.9E-48 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 LK04_RS08235 7b92169a3586c4de2a4f54a585d9f9e0 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 2.3E-59 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 LK04_RS08235 7b92169a3586c4de2a4f54a585d9f9e0 348 SUPERFAMILY SSF52096 100 208 1.27E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08235 7b92169a3586c4de2a4f54a585d9f9e0 348 SUPERFAMILY SSF52096 239 297 1.27E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08235 7b92169a3586c4de2a4f54a585d9f9e0 348 PANTHER PTHR33209 1 348 1.0E-192 T 22-04-2016 LK04_RS08235 7b92169a3586c4de2a4f54a585d9f9e0 348 Gene3D G3DSA:3.90.226.10 97 204 7.9E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08235 7b92169a3586c4de2a4f54a585d9f9e0 348 Gene3D G3DSA:3.90.226.10 270 302 7.9E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS18515 dba39701b2a06b096883b61b71eabcc8 195 SMART SM00926 43 104 1.6E-22 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LK04_RS18515 dba39701b2a06b096883b61b71eabcc8 195 Gene3D G3DSA:2.20.25.90 37 107 3.6E-24 T 22-04-2016 LK04_RS18515 dba39701b2a06b096883b61b71eabcc8 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 104 1.4E-19 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LK04_RS18515 dba39701b2a06b096883b61b71eabcc8 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 LK04_RS18515 dba39701b2a06b096883b61b71eabcc8 195 PANTHER PTHR11615 29 195 2.1E-112 T 22-04-2016 LK04_RS18515 dba39701b2a06b096883b61b71eabcc8 195 PANTHER PTHR11615:SF149 29 195 2.1E-112 T 22-04-2016 LK04_RS18515 dba39701b2a06b096883b61b71eabcc8 195 Pfam PF00384 Molybdopterin oxidoreductase 107 146 2.2E-5 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LK04_RS18515 dba39701b2a06b096883b61b71eabcc8 195 Gene3D G3DSA:3.40.50.740 108 174 5.8E-16 T 22-04-2016 LK04_RS18515 dba39701b2a06b096883b61b71eabcc8 195 SUPERFAMILY SSF53706 35 195 1.03E-55 T 22-04-2016 LK04_RS10220 4a3873b05a849c4e5e1413746af0cc8a 285 SUPERFAMILY SSF111369 42 216 3.53E-27 T 22-04-2016 LK04_RS10220 4a3873b05a849c4e5e1413746af0cc8a 285 PANTHER PTHR30367:SF5 1 283 9.7E-127 T 22-04-2016 LK04_RS10220 4a3873b05a849c4e5e1413746af0cc8a 285 Gene3D G3DSA:2.40.50.100 45 77 1.3E-19 T 22-04-2016 LK04_RS10220 4a3873b05a849c4e5e1413746af0cc8a 285 Gene3D G3DSA:2.40.50.100 151 184 1.3E-19 T 22-04-2016 LK04_RS10220 4a3873b05a849c4e5e1413746af0cc8a 285 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 231 7.9E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS10220 4a3873b05a849c4e5e1413746af0cc8a 285 PANTHER PTHR30367 1 283 9.7E-127 T 22-04-2016 LK04_RS10220 4a3873b05a849c4e5e1413746af0cc8a 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 230 6.6E-41 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Gene3D G3DSA:3.90.980.10 115 240 3.6E-48 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 PANTHER PTHR30313 3 579 6.7E-179 T 22-04-2016 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Gene3D G3DSA:1.20.50.20 368 426 7.5E-27 T 22-04-2016 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 6.6E-45 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 SUPERFAMILY SSF117023 447 578 2.09E-44 T 22-04-2016 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.356 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Pfam PF01807 CHC2 zinc finger 7 100 1.0E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 SMART SM00493 259 330 1.4E-21 T 22-04-2016 IPR006171 Toprim domain LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 SMART SM00766 450 575 2.4E-49 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 1.3E-11 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Gene3D G3DSA:3.90.580.10 1 101 9.1E-41 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 SUPERFAMILY SSF56731 115 427 9.94E-116 T 22-04-2016 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 2.8E-35 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Gene3D G3DSA:1.10.860.10 437 580 1.1E-52 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Pfam PF13155 Toprim-like 263 348 5.7E-15 T 22-04-2016 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 Gene3D G3DSA:3.40.1360.10 241 366 1.9E-47 T 22-04-2016 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 2.7E-152 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 SUPERFAMILY SSF57783 4 100 2.21E-35 T 22-04-2016 LK04_RS01900 fb393a1fe95fd3a427149493c3635ec4 581 SMART SM00400 36 90 1.3E-37 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 675 37.06 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 Gene3D G3DSA:3.40.50.2300 606 667 1.1E-73 T 22-04-2016 LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 Gene3D G3DSA:3.40.50.2300 354 424 1.1E-73 T 22-04-2016 LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 Gene3D G3DSA:3.40.50.2300 258 287 1.1E-73 T 22-04-2016 LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 SUPERFAMILY SSF53822 524 680 1.3E-73 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 SUPERFAMILY SSF53822 354 484 1.3E-73 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 SUPERFAMILY SSF53822 260 287 1.3E-73 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 PANTHER PTHR38038 316 681 3.1E-196 T 22-04-2016 LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 PANTHER PTHR38038 2 288 3.1E-196 T 22-04-2016 LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 Pfam PF04348 LppC putative lipoprotein 349 675 4.8E-95 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 Pfam PF04348 LppC putative lipoprotein 45 290 1.1E-49 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 Gene3D G3DSA:3.40.50.2300 528 605 4.1E-55 T 22-04-2016 LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 Gene3D G3DSA:3.40.50.2300 425 485 4.1E-55 T 22-04-2016 LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 PANTHER PTHR38038:SF1 316 681 3.1E-196 T 22-04-2016 LK04_RS01605 146de990aca7bdf870f1bee51a05af06 681 PANTHER PTHR38038:SF1 2 288 3.1E-196 T 22-04-2016 LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 Pfam PF01580 FtsK/SpoIIIE family 749 962 1.1E-74 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 PANTHER PTHR22683:SF41 1 311 0.0 T 22-04-2016 LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 PANTHER PTHR22683 367 1127 0.0 T 22-04-2016 LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 PANTHER PTHR22683:SF41 367 1127 0.0 T 22-04-2016 LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 SUPERFAMILY SSF52540 723 1035 8.23E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 PANTHER PTHR22683 1 311 0.0 T 22-04-2016 LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 SMART SM00843 1063 1128 8.0E-42 T 22-04-2016 IPR018541 FtsK gamma domain LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 SUPERFAMILY SSF46785 1063 1127 3.81E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 Pfam PF09397 Ftsk gamma domain 1065 1124 6.7E-28 T 22-04-2016 IPR018541 FtsK gamma domain LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 5.5E-44 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region LK04_RS12135 0e618d159f0388056f7fe1b10dfeade6 1131 Gene3D G3DSA:3.40.50.300 723 1029 4.9E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 SUPERFAMILY SSF53706 36 700 2.75E-204 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 SMART SM00926 39 93 1.0E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Gene3D G3DSA:2.20.25.90 38 95 1.4E-19 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Pfam PF01568 Molydopterin dinucleotide binding domain 715 822 1.1E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 2.0E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 SUPERFAMILY SSF50692 688 827 1.31E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Gene3D G3DSA:2.40.40.20 667 828 1.6E-45 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Gene3D G3DSA:3.40.50.740 621 664 8.0E-81 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Gene3D G3DSA:3.40.50.740 399 575 8.0E-81 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Gene3D G3DSA:3.40.50.740 96 178 8.0E-81 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 92 4.3E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 PANTHER PTHR11615:SF123 39 284 0.0 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 PANTHER PTHR11615:SF123 643 828 0.0 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 PANTHER PTHR11615:SF123 345 596 0.0 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Hamap MF_01630 Nitrate reductase [napA]. 1 828 29.32 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Pfam PF00384 Molybdopterin oxidoreductase 96 568 9.1E-91 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 PANTHER PTHR11615 39 284 0.0 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 PANTHER PTHR11615 643 828 0.0 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 PANTHER PTHR11615 345 596 0.0 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Gene3D G3DSA:3.40.228.10 325 398 8.4E-55 T 22-04-2016 LK04_RS04500 41881d42fba29f11d44569838144ce4a 828 Gene3D G3DSA:3.40.228.10 179 291 8.4E-55 T 22-04-2016 LK04_RS13680 2137e5e7fbb016cd2e61bbd6e1b19ff0 169 SUPERFAMILY SSF52255 7 165 1.15E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LK04_RS13680 2137e5e7fbb016cd2e61bbd6e1b19ff0 169 Gene3D G3DSA:3.40.50.7700 5 163 5.0E-74 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LK04_RS13680 2137e5e7fbb016cd2e61bbd6e1b19ff0 169 PANTHER PTHR23046 8 166 3.8E-87 T 22-04-2016 LK04_RS13680 2137e5e7fbb016cd2e61bbd6e1b19ff0 169 PANTHER PTHR23046:SF2 8 166 3.8E-87 T 22-04-2016 LK04_RS13680 2137e5e7fbb016cd2e61bbd6e1b19ff0 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 163 9.8E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LK04_RS13680 2137e5e7fbb016cd2e61bbd6e1b19ff0 169 PIRSF PIRSF001338 5 166 1.2E-65 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 LK04_RS13680 2137e5e7fbb016cd2e61bbd6e1b19ff0 169 SMART SM01001 8 159 6.6E-100 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LK04_RS13680 2137e5e7fbb016cd2e61bbd6e1b19ff0 169 Pfam PF00731 AIR carboxylase 10 157 3.9E-63 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LK04_RS13680 2137e5e7fbb016cd2e61bbd6e1b19ff0 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 31.942 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 PANTHER PTHR11019 6 259 8.8E-76 T 22-04-2016 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 Gene3D G3DSA:2.60.120.10 14 85 1.7E-8 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 SUPERFAMILY SSF51182 6 195 1.11E-17 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 235 2.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 251 2.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 204 247 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 SMART SM00342 169 251 2.0E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 Gene3D G3DSA:1.10.10.60 207 250 1.6E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 Gene3D G3DSA:1.10.10.60 150 206 1.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 Pfam PF02311 AraC-like ligand binding domain 21 124 6.0E-7 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 Pfam PF12833 Helix-turn-helix domain 176 250 3.2E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 PANTHER PTHR11019:SF138 6 259 8.8E-76 T 22-04-2016 LK04_RS09585 5b436b2f2d9dbaa1934ebe7a693e6533 260 SUPERFAMILY SSF46689 206 250 1.7E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 SUPERFAMILY SSF81271 279 359 7.63E-36 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.3E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 Gene3D G3DSA:3.10.20.30 267 363 1.5E-49 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 SUPERFAMILY SSF52540 3 301 2.3E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 Gene3D G3DSA:1.10.150.300 131 200 1.6E-27 T 22-04-2016 IPR023192 TGS-like domain LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 PIRSF PIRSF006641 1 363 3.0E-157 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 PANTHER PTHR23305 1 363 1.9E-214 T 22-04-2016 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 4.8E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 6.7E-174 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.173 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 Gene3D G3DSA:3.40.50.300 4 130 3.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07180 a9a2861c2ab7ceba481148bbb54515c8 363 Gene3D G3DSA:3.40.50.300 201 266 3.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17045 719b59416421dbb546399f739a71ab07 452 SUPERFAMILY SSF47384 214 295 8.04E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 SUPERFAMILY SSF55874 286 452 2.49E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS17045 719b59416421dbb546399f739a71ab07 452 SMART SM00388 231 296 9.8E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 PANTHER PTHR24423:SF474 172 452 3.1E-55 T 22-04-2016 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 PANTHER PTHR24423:SF474 122 132 3.1E-55 T 22-04-2016 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 PANTHER PTHR24423 172 452 3.1E-55 T 22-04-2016 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 PANTHER PTHR24423 122 132 3.1E-55 T 22-04-2016 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 451 4.0E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS17045 719b59416421dbb546399f739a71ab07 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 295 1.6E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 Gene3D G3DSA:1.10.287.130 223 282 1.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 1.8E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 1.8E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 1.8E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS17045 719b59416421dbb546399f739a71ab07 452 SMART SM00387 341 452 1.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS17045 719b59416421dbb546399f739a71ab07 452 Gene3D G3DSA:3.30.565.10 283 452 7.7E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS15350 83feb3dedd3546abba525b40c22503e4 247 Pfam PF07072 Protein of unknown function (DUF1342) 19 225 2.8E-79 T 22-04-2016 IPR009777 Cell division protein ZapD LK04_RS15350 83feb3dedd3546abba525b40c22503e4 247 SUPERFAMILY SSF160950 3 247 2.22E-90 T 22-04-2016 LK04_RS15350 83feb3dedd3546abba525b40c22503e4 247 PANTHER PTHR39455:SF1 1 247 2.0E-109 T 22-04-2016 LK04_RS15350 83feb3dedd3546abba525b40c22503e4 247 Gene3D G3DSA:2.60.440.10 174 247 1.8E-33 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain LK04_RS15350 83feb3dedd3546abba525b40c22503e4 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 32.77 T 22-04-2016 IPR009777 Cell division protein ZapD LK04_RS15350 83feb3dedd3546abba525b40c22503e4 247 PANTHER PTHR39455 1 247 2.0E-109 T 22-04-2016 LK04_RS15350 83feb3dedd3546abba525b40c22503e4 247 Gene3D G3DSA:1.10.3900.10 13 173 7.7E-65 T 22-04-2016 LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 PANTHER PTHR18895 4 302 6.9E-190 T 22-04-2016 LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 Gene3D G3DSA:1.10.8.10 15 106 2.3E-7 T 22-04-2016 LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 PANTHER PTHR18895:SF66 4 302 6.9E-190 T 22-04-2016 LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.515 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 Gene3D G3DSA:3.40.50.150 108 287 2.8E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 304 3.3E-107 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 Pfam PF05175 Methyltransferase small domain 132 216 8.6E-17 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 SUPERFAMILY SSF53335 15 293 1.46E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 PIRSF PIRSF037167 1 307 8.6E-151 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 LK04_RS05275 f340e930aad50c8bf47dc37ed907e62e 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 2.0E-139 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 SUPERFAMILY SSF52425 3 200 5.36E-55 T 22-04-2016 IPR006050 DNA photolyase, N-terminal LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 Pfam PF00875 DNA photolyase 5 170 7.6E-46 T 22-04-2016 IPR006050 DNA photolyase, N-terminal LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 Gene3D G3DSA:3.40.50.620 2 149 1.3E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 PANTHER PTHR11455 1 472 8.4E-212 T 22-04-2016 LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 Gene3D G3DSA:1.10.579.10 286 472 5.4E-78 T 22-04-2016 LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 Pfam PF03441 FAD binding domain of DNA photolyase 275 469 3.0E-83 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 Gene3D G3DSA:1.25.40.80 150 285 1.1E-42 T 22-04-2016 LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 PANTHER PTHR11455:SF18 1 472 8.4E-212 T 22-04-2016 LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 PRINTS PR00147 DNA photolyase signature 325 341 4.1E-29 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 PRINTS PR00147 DNA photolyase signature 345 363 4.1E-29 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 PRINTS PR00147 DNA photolyase signature 145 161 4.1E-29 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 PRINTS PR00147 DNA photolyase signature 384 398 4.1E-29 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 SUPERFAMILY SSF48173 193 472 7.98E-109 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain LK04_RS13165 a8da12d9c07ae782694af3f1e3a7be34 475 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal LK04_RS17565 ab1ffb5952a7fc0786cbc5470a816fe2 477 PANTHER PTHR12526:SF17 1 477 4.3E-144 T 22-04-2016 LK04_RS17565 ab1ffb5952a7fc0786cbc5470a816fe2 477 Gene3D G3DSA:3.40.50.2000 252 456 7.1E-69 T 22-04-2016 LK04_RS17565 ab1ffb5952a7fc0786cbc5470a816fe2 477 PANTHER PTHR12526 1 477 4.3E-144 T 22-04-2016 LK04_RS17565 ab1ffb5952a7fc0786cbc5470a816fe2 477 Pfam PF08323 Starch synthase catalytic domain 2 233 4.9E-68 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS17565 ab1ffb5952a7fc0786cbc5470a816fe2 477 SUPERFAMILY SSF53756 5 477 1.47E-117 T 22-04-2016 LK04_RS17565 ab1ffb5952a7fc0786cbc5470a816fe2 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 8.0E-169 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS17565 ab1ffb5952a7fc0786cbc5470a816fe2 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 45.905 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS17565 ab1ffb5952a7fc0786cbc5470a816fe2 477 Pfam PF00534 Glycosyl transferases group 1 286 438 1.6E-13 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.834 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 Gene3D G3DSA:2.40.30.110 278 361 1.4E-28 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 1.5E-156 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 2.2E-82 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 Gene3D G3DSA:3.30.70.1400 54 137 5.7E-32 T 22-04-2016 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 1.8E-18 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 PIRSF PIRSF006487 1 363 3.3E-78 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 PANTHER PTHR13847 5 357 1.8E-62 T 22-04-2016 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 SUPERFAMILY SSF103025 3 277 5.02E-91 T 22-04-2016 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 SUPERFAMILY SSF101790 273 360 3.27E-25 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 Gene3D G3DSA:3.30.1360.120 144 231 1.4E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 Gene3D G3DSA:3.30.1360.120 3 53 1.4E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LK04_RS02970 81f1f04135c37b6b6226448c7c8df35d 365 PANTHER PTHR13847:SF5 5 357 1.8E-62 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LK04_RS10130 750e503c0c30bb36af75dbd216a4ca0c 352 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.443 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 LK04_RS10130 750e503c0c30bb36af75dbd216a4ca0c 352 PANTHER PTHR30578:SF0 3 351 9.0E-159 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 LK04_RS10130 750e503c0c30bb36af75dbd216a4ca0c 352 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 3.6E-141 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 LK04_RS10130 750e503c0c30bb36af75dbd216a4ca0c 352 PANTHER PTHR30578 3 351 9.0E-159 T 22-04-2016 LK04_RS10130 750e503c0c30bb36af75dbd216a4ca0c 352 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 5.4E-106 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 LK04_RS08300 b43c60ada4c6a4b5308af4c8b34bf02f 232 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 5.0E-120 T 22-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 LK04_RS08300 b43c60ada4c6a4b5308af4c8b34bf02f 232 Gene3D G3DSA:3.40.225.10 2 231 2.9E-70 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS08300 b43c60ada4c6a4b5308af4c8b34bf02f 232 SMART SM01007 7 198 1.6E-62 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS08300 b43c60ada4c6a4b5308af4c8b34bf02f 232 SUPERFAMILY SSF53639 2 223 1.96E-65 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS08300 b43c60ada4c6a4b5308af4c8b34bf02f 232 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 197 1.4E-44 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS08300 b43c60ada4c6a4b5308af4c8b34bf02f 232 PANTHER PTHR22789 1 231 6.4E-136 T 22-04-2016 LK04_RS08300 b43c60ada4c6a4b5308af4c8b34bf02f 232 PANTHER PTHR22789:SF8 1 231 6.4E-136 T 22-04-2016 LK04_RS15095 f9dda59d330078924f322df09996a99f 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 3 234 6.7E-84 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein LK04_RS15095 f9dda59d330078924f322df09996a99f 234 PANTHER PTHR30545:SF2 1 234 4.0E-88 T 22-04-2016 LK04_RS15095 f9dda59d330078924f322df09996a99f 234 Pfam PF03749 Sugar fermentation stimulation protein 13 224 2.9E-76 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein LK04_RS15095 f9dda59d330078924f322df09996a99f 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 56.447 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein LK04_RS15095 f9dda59d330078924f322df09996a99f 234 PANTHER PTHR30545 1 234 4.0E-88 T 22-04-2016 LK04_RS00765 46159c13aecc147f8c948908ab384d49 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS00765 46159c13aecc147f8c948908ab384d49 255 SMART SM00382 26 205 5.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS00765 46159c13aecc147f8c948908ab384d49 255 Gene3D G3DSA:3.40.50.300 1 212 1.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00765 46159c13aecc147f8c948908ab384d49 255 SUPERFAMILY SSF52540 1 213 9.38E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00765 46159c13aecc147f8c948908ab384d49 255 PANTHER PTHR24220:SF564 3 213 2.9E-133 T 22-04-2016 LK04_RS00765 46159c13aecc147f8c948908ab384d49 255 PANTHER PTHR24220 3 213 2.9E-133 T 22-04-2016 LK04_RS00765 46159c13aecc147f8c948908ab384d49 255 Pfam PF00005 ABC transporter 17 156 3.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS17975 a61db802cd099e558b07633c266b7056 278 Gene3D G3DSA:3.40.50.1820 39 272 1.5E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS17975 a61db802cd099e558b07633c266b7056 278 SUPERFAMILY SSF53474 40 272 3.91E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS17975 a61db802cd099e558b07633c266b7056 278 Pfam PF01738 Dienelactone hydrolase family 50 272 1.2E-68 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 LK04_RS17975 a61db802cd099e558b07633c266b7056 278 PANTHER PTHR17630 23 272 6.1E-106 T 22-04-2016 LK04_RS17975 a61db802cd099e558b07633c266b7056 278 PANTHER PTHR17630:SF42 23 272 6.1E-106 T 22-04-2016 LK04_RS14220 435ea6276042e8b79a62234af6ad7f69 353 Gene3D G3DSA:1.10.10.60 300 349 2.9E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS14220 435ea6276042e8b79a62234af6ad7f69 353 SUPERFAMILY SSF46689 300 349 9.32E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS14220 435ea6276042e8b79a62234af6ad7f69 353 SMART SM00342 265 347 2.2E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS14220 435ea6276042e8b79a62234af6ad7f69 353 PANTHER PTHR11019:SF52 204 348 4.1E-27 T 22-04-2016 LK04_RS14220 435ea6276042e8b79a62234af6ad7f69 353 PANTHER PTHR11019 204 348 4.1E-27 T 22-04-2016 LK04_RS14220 435ea6276042e8b79a62234af6ad7f69 353 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 39 221 4.0E-50 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal LK04_RS14220 435ea6276042e8b79a62234af6ad7f69 353 Pfam PF12833 Helix-turn-helix domain 271 348 1.7E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS14220 435ea6276042e8b79a62234af6ad7f69 353 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 331 347 8.0E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS14220 435ea6276042e8b79a62234af6ad7f69 353 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 331 8.0E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS02545 0c17b5f100bba8127ecf09ef26e2b394 122 SUPERFAMILY SSF46785 12 116 2.69E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02545 0c17b5f100bba8127ecf09ef26e2b394 122 Pfam PF01638 HxlR-like helix-turn-helix 28 115 8.0E-28 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type LK04_RS02545 0c17b5f100bba8127ecf09ef26e2b394 122 PANTHER PTHR33204 6 119 8.0E-58 T 22-04-2016 LK04_RS02545 0c17b5f100bba8127ecf09ef26e2b394 122 PANTHER PTHR33204:SF7 6 119 8.0E-58 T 22-04-2016 LK04_RS02545 0c17b5f100bba8127ecf09ef26e2b394 122 Gene3D G3DSA:1.10.10.10 4 119 1.4E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19470 5ce1577e0f2e9b39b1f6f165571f2eee 302 Gene3D G3DSA:3.90.1480.10 62 299 9.8E-32 T 22-04-2016 LK04_RS19470 5ce1577e0f2e9b39b1f6f165571f2eee 302 ProDom PD024016 LIPOPOLYSACCHARIDE BIOSYNTHESIS CORE RFAZ WAAZ 49 289 9.0E-10 T 22-04-2016 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 Gene3D G3DSA:1.20.120.140 2 89 1.2E-35 T 22-04-2016 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 PANTHER PTHR11564 1 435 1.2E-276 T 22-04-2016 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 SUPERFAMILY SSF47446 329 431 2.45E-39 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 Gene3D G3DSA:1.10.260.30 329 432 3.9E-42 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 SUPERFAMILY SSF52540 42 354 2.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 Pfam PF02978 Signal peptide binding domain 329 427 5.5E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 3.9E-76 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.893 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.9E-23 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 SMART SM00962 100 296 9.1E-118 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.2E-179 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 PANTHER PTHR11564:SF7 1 435 1.2E-276 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 SMART SM00963 1 86 2.9E-37 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 Gene3D G3DSA:3.40.50.300 93 297 5.3E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03645 e2fe5758ad2b2905fb1e7b5be9e2b9a6 453 SMART SM00382 99 247 8.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS14055 48113c8092f5608956c98ca26710123c 306 SUPERFAMILY SSF48179 168 289 1.33E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS14055 48113c8092f5608956c98ca26710123c 306 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 6.1E-71 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS14055 48113c8092f5608956c98ca26710123c 306 Gene3D G3DSA:1.10.1040.10 175 290 1.6E-40 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS14055 48113c8092f5608956c98ca26710123c 306 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 3.0E-23 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS14055 48113c8092f5608956c98ca26710123c 306 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 6.3E-34 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS14055 48113c8092f5608956c98ca26710123c 306 PANTHER PTHR21708 1 297 3.7E-78 T 22-04-2016 LK04_RS14055 48113c8092f5608956c98ca26710123c 306 SUPERFAMILY SSF51735 1 167 1.37E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS14055 48113c8092f5608956c98ca26710123c 306 PANTHER PTHR21708:SF24 1 297 3.7E-78 T 22-04-2016 LK04_RS14055 48113c8092f5608956c98ca26710123c 306 Gene3D G3DSA:3.40.50.720 1 174 1.2E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS04065 012bbf6ca4e49e33d0e395474beca51f 212 Gene3D G3DSA:3.40.50.1000 5 31 4.1E-5 T 22-04-2016 IPR023214 HAD-like domain LK04_RS04065 012bbf6ca4e49e33d0e395474beca51f 212 Gene3D G3DSA:3.40.50.1000 101 119 4.1E-5 T 22-04-2016 IPR023214 HAD-like domain LK04_RS04065 012bbf6ca4e49e33d0e395474beca51f 212 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 193 9.6E-14 T 22-04-2016 LK04_RS04065 012bbf6ca4e49e33d0e395474beca51f 212 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 5 212 2.8E-120 T 22-04-2016 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LK04_RS04065 012bbf6ca4e49e33d0e395474beca51f 212 Gene3D G3DSA:3.40.50.1000 120 210 2.9E-5 T 22-04-2016 IPR023214 HAD-like domain LK04_RS04065 012bbf6ca4e49e33d0e395474beca51f 212 SUPERFAMILY SSF56784 6 131 2.21E-7 T 22-04-2016 IPR023214 HAD-like domain LK04_RS12215 07c1df6740de885a9a0624948fa423cf 179 Pfam PF12883 Protein of unknown function (DUF3828) 40 160 2.6E-18 T 22-04-2016 IPR024289 Domain of unknown function DUF3828 LK04_RS08765 b78bada1e8605ce5a16d654996f162b6 111 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 24 111 9.0E-30 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 LK04_RS08765 b78bada1e8605ce5a16d654996f162b6 111 Pfam PF06932 Protein of unknown function (DUF1283) 30 111 1.8E-42 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 LK04_RS08765 b78bada1e8605ce5a16d654996f162b6 111 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 1 111 27.58 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 PIRSF PIRSF039144 1 112 3.6E-53 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 PANTHER PTHR30115:SF12 1 112 3.9E-83 T 22-04-2016 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 SUPERFAMILY SSF54913 1 112 1.18E-42 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 Gene3D G3DSA:3.30.70.120 1 112 3.7E-48 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 SMART SM00938 4 105 1.8E-61 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 PANTHER PTHR30115 1 112 3.9E-83 T 22-04-2016 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 PRINTS PR00340 P-II protein signature 83 103 3.2E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 PRINTS PR00340 P-II protein signature 23 41 3.2E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 PRINTS PR00340 P-II protein signature 52 75 3.2E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 PRINTS PR00340 P-II protein signature 2 17 3.2E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS13910 990f2bb60143684899de97fe40518c9f 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 SUPERFAMILY SSF63520 296 391 3.66E-22 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 623 7.1E-14 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 Gene3D G3DSA:1.10.1790.10 295 391 6.5E-24 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 Pfam PF00874 PRD domain 300 386 1.3E-20 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 Gene3D G3DSA:1.10.10.10 5 65 1.9E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 Gene3D G3DSA:1.10.10.10 89 151 1.1E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 Pfam PF05043 Mga helix-turn-helix domain 90 165 5.6E-11 T 22-04-2016 IPR007737 Mga helix-turn-helix domain LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 SUPERFAMILY SSF52794 401 478 2.09E-5 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 SUPERFAMILY SSF55804 490 626 1.1E-23 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 Gene3D G3DSA:3.40.930.10 489 625 3.7E-23 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 PANTHER PTHR30185 5 634 7.9E-182 T 22-04-2016 LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 Pfam PF08279 HTH domain 7 63 2.6E-8 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 LK04_RS01575 c85cf418e72f15619b369ab8ce1539f0 636 PANTHER PTHR30185:SF5 5 634 7.9E-182 T 22-04-2016 LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 SUPERFAMILY SSF52467 189 362 1.13E-62 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.6E-47 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 PANTHER PTHR18968:SF116 2 574 0.0 T 22-04-2016 LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 3.5E-275 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 545 1.6E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 Gene3D G3DSA:3.40.50.970 357 558 1.2E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 Gene3D G3DSA:3.40.50.970 2 173 4.2E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 SUPERFAMILY SSF52518 2 180 4.03E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 Gene3D G3DSA:3.40.50.1220 190 356 4.9E-68 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 PANTHER PTHR18968 2 574 0.0 T 22-04-2016 LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 7.0E-59 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LK04_RS15465 bad72fad42b57d584fd07b57b1a3f679 574 SUPERFAMILY SSF52518 370 568 3.75E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS04150 ede9c46d7b963e2d452f3624988af314 389 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 389 49.904 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 LK04_RS04150 ede9c46d7b963e2d452f3624988af314 389 PANTHER PTHR11601:SF45 4 385 6.1E-213 T 22-04-2016 LK04_RS04150 ede9c46d7b963e2d452f3624988af314 389 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LK04_RS04150 ede9c46d7b963e2d452f3624988af314 389 Pfam PF00266 Aminotransferase class-V 5 368 9.9E-87 T 22-04-2016 IPR000192 Aminotransferase class V domain LK04_RS04150 ede9c46d7b963e2d452f3624988af314 389 SUPERFAMILY SSF53383 5 381 1.28E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS04150 ede9c46d7b963e2d452f3624988af314 389 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 385 1.0E-202 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 LK04_RS04150 ede9c46d7b963e2d452f3624988af314 389 Gene3D G3DSA:3.40.640.10 17 253 4.4E-94 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS04150 ede9c46d7b963e2d452f3624988af314 389 PANTHER PTHR11601 4 385 6.1E-213 T 22-04-2016 LK04_RS04150 ede9c46d7b963e2d452f3624988af314 389 PIRSF PIRSF005572 2 383 1.0E-137 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LK04_RS04150 ede9c46d7b963e2d452f3624988af314 389 Gene3D G3DSA:3.90.1150.10 254 375 6.9E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS10200 262a7080ae59df8a0bde3a5c9c8d3438 373 PANTHER PTHR30605 1 372 5.1E-242 T 22-04-2016 LK04_RS10200 262a7080ae59df8a0bde3a5c9c8d3438 373 SUPERFAMILY SSF53067 66 111 2.07E-26 T 22-04-2016 LK04_RS10200 262a7080ae59df8a0bde3a5c9c8d3438 373 SUPERFAMILY SSF53067 143 341 2.07E-26 T 22-04-2016 LK04_RS10200 262a7080ae59df8a0bde3a5c9c8d3438 373 SUPERFAMILY SSF53067 5 36 2.07E-26 T 22-04-2016 LK04_RS10200 262a7080ae59df8a0bde3a5c9c8d3438 373 PANTHER PTHR30605:SF2 1 372 5.1E-242 T 22-04-2016 LK04_RS10200 262a7080ae59df8a0bde3a5c9c8d3438 373 Gene3D G3DSA:3.30.420.40 5 196 2.7E-73 T 22-04-2016 LK04_RS10200 262a7080ae59df8a0bde3a5c9c8d3438 373 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 367 2.4E-171 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 LK04_RS10200 262a7080ae59df8a0bde3a5c9c8d3438 373 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 42.468 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 LK04_RS10940 f38f63f6f48bc84705e32e3f0917bcfc 187 SUPERFAMILY SSF53335 14 167 1.98E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10940 f38f63f6f48bc84705e32e3f0917bcfc 187 Gene3D G3DSA:3.40.50.150 14 151 1.4E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10940 f38f63f6f48bc84705e32e3f0917bcfc 187 Pfam PF13649 Methyltransferase domain 52 143 9.8E-10 T 22-04-2016 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 4.4E-24 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 Gene3D G3DSA:3.30.230.10 218 391 7.6E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 SUPERFAMILY SSF56719 389 622 1.67E-77 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 1.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 1.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 1.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 1.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 1.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 1.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 1.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 1.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 1.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.205 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 2.7E-149 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PANTHER PTHR10169 1 630 0.0 T 22-04-2016 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 SUPERFAMILY SSF55874 6 216 2.58E-68 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 SMART SM00387 28 174 2.1E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 PANTHER PTHR10169:SF45 1 630 0.0 T 22-04-2016 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 SMART SM00433 35 625 5.6E-208 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 9.1E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 Pfam PF00204 DNA gyrase B 219 385 5.5E-39 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 SUPERFAMILY SSF54211 218 383 2.47E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 Pfam PF01751 Toprim domain 414 523 2.2E-12 T 22-04-2016 IPR006171 Toprim domain LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 Gene3D G3DSA:3.40.50.670 399 612 1.8E-76 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02005 d7c2b1842cf2853270dae9814167be2e 631 Gene3D G3DSA:3.30.565.10 16 214 4.8E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS17470 d038ca816eb528fadb5dafc0b5797307 237 PANTHER PTHR24220 7 236 5.7E-137 T 22-04-2016 LK04_RS17470 d038ca816eb528fadb5dafc0b5797307 237 SUPERFAMILY SSF52540 3 234 6.63E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17470 d038ca816eb528fadb5dafc0b5797307 237 Pfam PF00005 ABC transporter 21 165 2.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS17470 d038ca816eb528fadb5dafc0b5797307 237 PIRSF PIRSF039137 1 237 7.1E-104 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 LK04_RS17470 d038ca816eb528fadb5dafc0b5797307 237 Gene3D G3DSA:3.40.50.300 2 234 8.9E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17470 d038ca816eb528fadb5dafc0b5797307 237 PANTHER PTHR24220:SF568 7 236 5.7E-137 T 22-04-2016 LK04_RS17470 d038ca816eb528fadb5dafc0b5797307 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS17470 d038ca816eb528fadb5dafc0b5797307 237 SMART SM00382 30 221 1.1E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 1.6E-116 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 327 1.1E-8 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 Gene3D G3DSA:1.20.140.10 349 507 1.5E-23 T 22-04-2016 LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 Gene3D G3DSA:2.40.110.10 237 348 2.0E-16 T 22-04-2016 LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 145 233 1.1E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 1.1E-13 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 Gene3D G3DSA:1.10.540.10 95 234 7.8E-34 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 PANTHER PTHR10909:SF321 49 531 0.0 T 22-04-2016 LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 SUPERFAMILY SSF47203 360 507 6.12E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 PANTHER PTHR10909 49 531 0.0 T 22-04-2016 LK04_RS14630 8d57e1ec3631fc8ea863216c1583bf89 814 SUPERFAMILY SSF56645 117 355 1.83E-45 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 SUPERFAMILY SSF54292 1 77 2.25E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Gene3D G3DSA:3.10.20.30 3 73 1.4E-6 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 6.3E-11 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 PANTHER PTHR11615:SF134 496 680 0.0 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 PANTHER PTHR11615:SF134 739 904 0.0 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 PANTHER PTHR11615:SF134 364 430 0.0 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 PANTHER PTHR11615:SF134 3 320 0.0 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 2.8E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 2.0E-204 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Pfam PF00384 Molybdopterin oxidoreductase 553 638 1.9E-7 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Gene3D G3DSA:2.20.25.90 228 275 9.4E-15 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 SUPERFAMILY SSF50692 814 890 1.2E-12 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 SUPERFAMILY SSF54862 82 213 6.7E-34 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 PANTHER PTHR11615 496 680 0.0 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 PANTHER PTHR11615 739 904 0.0 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 PANTHER PTHR11615 364 430 0.0 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 PANTHER PTHR11615 3 320 0.0 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 8.3E-15 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Gene3D G3DSA:3.40.50.740 504 687 6.6E-35 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Gene3D G3DSA:3.40.50.740 278 340 6.6E-35 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 SMART SM00926 221 275 3.7E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Pfam PF01568 Molydopterin dinucleotide binding domain 823 889 1.6E-6 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 SMART SM00929 88 128 1.9E-19 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Gene3D G3DSA:3.30.70.20 147 157 1.4E-4 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Gene3D G3DSA:3.30.70.20 198 227 1.4E-4 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 Gene3D G3DSA:2.40.40.20 814 889 2.5E-10 T 22-04-2016 LK04_RS05515 badc609db4ab93198694e87edbdd1ab0 907 SUPERFAMILY SSF53706 219 687 1.88E-81 T 22-04-2016 LK04_RS07005 2c8ae18832436d9aeebb60562634e5aa 79 PANTHER PTHR36572 2 79 4.8E-37 T 22-04-2016 LK04_RS07005 2c8ae18832436d9aeebb60562634e5aa 79 PANTHER PTHR36572:SF1 2 79 4.8E-37 T 22-04-2016 LK04_RS07005 2c8ae18832436d9aeebb60562634e5aa 79 Pfam PF06183 DinI-like family 17 76 1.8E-21 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like LK04_RS07005 2c8ae18832436d9aeebb60562634e5aa 79 Gene3D G3DSA:3.30.910.10 1 78 7.4E-25 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like LK04_RS07005 2c8ae18832436d9aeebb60562634e5aa 79 SUPERFAMILY SSF54857 1 78 1.57E-21 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like LK04_RS11275 2daf9cb31c0c3bd6c5688c797a8aacae 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 319 1.3E-37 T 22-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS11275 2daf9cb31c0c3bd6c5688c797a8aacae 329 PANTHER PTHR11669 12 324 4.2E-98 T 22-04-2016 LK04_RS11275 2daf9cb31c0c3bd6c5688c797a8aacae 329 Gene3D G3DSA:1.20.272.10 208 325 1.4E-38 T 22-04-2016 LK04_RS11275 2daf9cb31c0c3bd6c5688c797a8aacae 329 SUPERFAMILY SSF52540 1 206 2.45E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11275 2daf9cb31c0c3bd6c5688c797a8aacae 329 Pfam PF13177 DNA polymerase III, delta subunit 9 166 5.3E-38 T 22-04-2016 LK04_RS11275 2daf9cb31c0c3bd6c5688c797a8aacae 329 PANTHER PTHR11669:SF8 12 324 4.2E-98 T 22-04-2016 LK04_RS11275 2daf9cb31c0c3bd6c5688c797a8aacae 329 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 201 6.9E-56 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS11275 2daf9cb31c0c3bd6c5688c797a8aacae 329 SUPERFAMILY SSF48019 208 322 3.23E-29 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 LK04_RS11275 2daf9cb31c0c3bd6c5688c797a8aacae 329 Gene3D G3DSA:1.10.8.10 173 206 1.3E-5 T 22-04-2016 LK04_RS11275 2daf9cb31c0c3bd6c5688c797a8aacae 329 Gene3D G3DSA:3.40.50.300 4 166 7.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11425 880dbc29fec65895ea43ce9fdaffde43 306 SUPERFAMILY SSF51735 3 136 1.63E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS11425 880dbc29fec65895ea43ce9fdaffde43 306 PANTHER PTHR22604 2 305 4.2E-126 T 22-04-2016 LK04_RS11425 880dbc29fec65895ea43ce9fdaffde43 306 Gene3D G3DSA:3.40.50.720 2 127 2.3E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS11425 880dbc29fec65895ea43ce9fdaffde43 306 SUPERFAMILY SSF55347 122 263 2.18E-39 T 22-04-2016 LK04_RS11425 880dbc29fec65895ea43ce9fdaffde43 306 PANTHER PTHR22604:SF126 2 305 4.2E-126 T 22-04-2016 LK04_RS11425 880dbc29fec65895ea43ce9fdaffde43 306 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 1.2E-26 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS11425 880dbc29fec65895ea43ce9fdaffde43 306 Gene3D G3DSA:3.30.360.10 128 305 5.0E-64 T 22-04-2016 LK04_RS18960 8c7fd820cae9523c7bcb2710f1ec0b69 412 Gene3D G3DSA:1.20.1250.20 15 193 3.0E-33 T 22-04-2016 LK04_RS18960 8c7fd820cae9523c7bcb2710f1ec0b69 412 Gene3D G3DSA:1.20.1250.20 225 403 2.4E-26 T 22-04-2016 LK04_RS18960 8c7fd820cae9523c7bcb2710f1ec0b69 412 Pfam PF07690 Major Facilitator Superfamily 22 305 3.0E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS18960 8c7fd820cae9523c7bcb2710f1ec0b69 412 SUPERFAMILY SSF103473 14 402 1.31E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS18960 8c7fd820cae9523c7bcb2710f1ec0b69 412 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS18960 8c7fd820cae9523c7bcb2710f1ec0b69 412 PANTHER PTHR23508 15 399 3.6E-126 T 22-04-2016 LK04_RS18960 8c7fd820cae9523c7bcb2710f1ec0b69 412 PANTHER PTHR23508:SF18 15 399 3.6E-126 T 22-04-2016 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 SMART SM00363 96 160 2.1E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 SUPERFAMILY SSF55174 3 206 1.44E-72 T 22-04-2016 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 7.1E-87 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 Gene3D G3DSA:3.10.290.10 102 190 1.3E-33 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 SMART SM01390 3 95 1.2E-48 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 Gene3D G3DSA:1.10.1050.10 1 101 9.9E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.9E-30 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 PANTHER PTHR11831 1 206 5.4E-95 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 Pfam PF01479 S4 domain 97 143 9.0E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.468 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 LK04_RS00990 ec8c5516b46a7ba375cccec2ef270ccd 206 PANTHER PTHR11831:SF4 1 206 5.4E-95 T 22-04-2016 LK04_RS08740 8eb5ffe1c2114d0ca4277ba9304a81a5 215 PANTHER PTHR30177:SF4 1 215 1.1E-83 T 22-04-2016 LK04_RS08740 8eb5ffe1c2114d0ca4277ba9304a81a5 215 SUPERFAMILY SSF161098 11 204 9.81E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08740 8eb5ffe1c2114d0ca4277ba9304a81a5 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 208 5.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08740 8eb5ffe1c2114d0ca4277ba9304a81a5 215 PANTHER PTHR30177 1 215 1.1E-83 T 22-04-2016 LK04_RS08740 8eb5ffe1c2114d0ca4277ba9304a81a5 215 Gene3D G3DSA:1.10.3720.10 9 203 2.1E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 Pfam PF05192 MutS domain III 268 555 2.1E-42 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 Gene3D G3DSA:3.40.1170.10 4 119 1.3E-49 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 SMART SM00534 603 790 2.0E-120 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 6 839 25.4 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 Gene3D G3DSA:3.40.50.300 563 793 6.5E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 Pfam PF05188 MutS domain II 127 252 6.0E-32 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 Gene3D G3DSA:3.30.420.110 125 253 1.3E-42 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 SUPERFAMILY SSF53150 113 265 2.62E-42 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 PIRSF PIRSF037677 2 827 1.4E-155 T 22-04-2016 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 Gene3D G3DSA:1.10.1420.10 263 464 1.4E-55 T 22-04-2016 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 6 844 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 PANTHER PTHR11361 1 846 0.0 T 22-04-2016 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 PANTHER PTHR11361:SF86 1 846 0.0 T 22-04-2016 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 Pfam PF01624 MutS domain I 7 118 2.1E-41 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 SUPERFAMILY SSF48334 266 562 3.27E-91 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 SUPERFAMILY SSF52540 563 793 5.73E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 SMART SM00533 282 587 2.0E-109 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 Pfam PF00488 MutS domain V 606 793 1.8E-87 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 Pfam PF05190 MutS family domain IV 424 513 1.2E-28 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 SUPERFAMILY SSF55271 3 112 5.49E-42 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 LK04_RS03535 fd4712675d3ac4c741e6feda4a1930d0 847 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 684 700 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LK04_RS11155 e37f7d9b4bc6edcf7914ce6dc6e0dc46 213 PANTHER PTHR38100:SF1 2 209 1.2E-91 T 22-04-2016 LK04_RS11155 e37f7d9b4bc6edcf7914ce6dc6e0dc46 213 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 1.0E-73 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 LK04_RS11155 e37f7d9b4bc6edcf7914ce6dc6e0dc46 213 Gene3D G3DSA:1.10.3890.10 2 209 2.2E-86 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 LK04_RS11155 e37f7d9b4bc6edcf7914ce6dc6e0dc46 213 PANTHER PTHR38100 2 209 1.2E-91 T 22-04-2016 LK04_RS11155 e37f7d9b4bc6edcf7914ce6dc6e0dc46 213 Pfam PF04356 Protein of unknown function (DUF489) 7 199 5.1E-75 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 LK04_RS11155 e37f7d9b4bc6edcf7914ce6dc6e0dc46 213 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.078 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 LK04_RS11155 e37f7d9b4bc6edcf7914ce6dc6e0dc46 213 SUPERFAMILY SSF101322 2 209 1.7E-80 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 LK04_RS04430 47d3fe69acc78e7305a9243d0ba679eb 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.392 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LK04_RS04430 47d3fe69acc78e7305a9243d0ba679eb 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LK04_RS04430 47d3fe69acc78e7305a9243d0ba679eb 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 1.8E-79 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LK04_RS04430 47d3fe69acc78e7305a9243d0ba679eb 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LK04_RS04430 47d3fe69acc78e7305a9243d0ba679eb 237 Pfam PF01259 SAICAR synthetase 6 231 8.4E-57 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LK04_RS04430 47d3fe69acc78e7305a9243d0ba679eb 237 PANTHER PTHR11609:SF2 3 236 1.4E-118 T 22-04-2016 LK04_RS04430 47d3fe69acc78e7305a9243d0ba679eb 237 PANTHER PTHR11609 3 236 1.4E-118 T 22-04-2016 LK04_RS04430 47d3fe69acc78e7305a9243d0ba679eb 237 Gene3D G3DSA:3.30.470.20 94 219 6.4E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS04430 47d3fe69acc78e7305a9243d0ba679eb 237 Gene3D G3DSA:3.30.200.20 7 93 1.7E-32 T 22-04-2016 LK04_RS04430 47d3fe69acc78e7305a9243d0ba679eb 237 SUPERFAMILY SSF56104 4 232 3.14E-74 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937:SF201 847 878 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937:SF201 99 426 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937:SF201 560 814 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937:SF201 1426 1459 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937:SF201 897 938 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937:SF201 977 1116 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937:SF201 444 529 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937:SF201 1212 1248 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 Pfam PF04310 MukB N-terminal 2 227 9.4E-121 T 22-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 SUPERFAMILY SSF52540 22 55 1.18E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 SUPERFAMILY SSF52540 1268 1432 1.18E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PIRSF PIRSF005246 1 1486 0.0 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 10.989 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 SUPERFAMILY SSF52540 22 224 3.75E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 Pfam PF16330 MukB hinge domain 645 810 4.8E-74 T 22-04-2016 IPR032520 MukB, hinge domain LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 Gene3D G3DSA:3.40.1140.10 1 225 1.5E-47 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 6.6E-15 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937 847 878 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937 99 426 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937 560 814 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937 1426 1459 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937 897 938 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937 977 1116 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937 444 529 0.0 T 22-04-2016 LK04_RS12005 f5d08a8cb465a292a7be33763911ed2c 1488 PANTHER PTHR18937 1212 1248 0.0 T 22-04-2016 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 757 6.9E-276 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 Gene3D G3DSA:3.40.228.10 183 394 2.2E-51 T 22-04-2016 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 Pfam PF00384 Molybdopterin oxidoreductase 109 494 4.3E-22 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 PIRSF PIRSF000144 1 763 0.0 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 SUPERFAMILY SSF50692 643 761 5.88E-17 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 SUPERFAMILY SSF53706 48 630 1.7E-138 T 22-04-2016 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 Pfam PF01568 Molydopterin dinucleotide binding domain 646 753 1.3E-10 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 Gene3D G3DSA:2.40.40.20 641 757 3.1E-11 T 22-04-2016 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 PANTHER PTHR11615 36 252 2.4E-244 T 22-04-2016 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 PANTHER PTHR11615 271 757 2.4E-244 T 22-04-2016 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 Gene3D G3DSA:3.40.50.740 395 626 7.1E-52 T 22-04-2016 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 Gene3D G3DSA:3.40.50.740 109 182 7.1E-52 T 22-04-2016 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 PANTHER PTHR11615:SF114 36 252 2.4E-244 T 22-04-2016 LK04_RS08335 4cbe0a25658c7b89a35f37707ca829f7 769 PANTHER PTHR11615:SF114 271 757 2.4E-244 T 22-04-2016 LK04_RS05855 f1bd8730e784a7b4e80f9da99efb8bda 336 PANTHER PTHR32196 6 336 2.9E-227 T 22-04-2016 LK04_RS05855 f1bd8730e784a7b4e80f9da99efb8bda 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 5.3E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS05855 f1bd8730e784a7b4e80f9da99efb8bda 336 PANTHER PTHR32196:SF18 6 336 2.9E-227 T 22-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 LK04_RS03040 5aa4fe5cd7f4411e484be5d6e0d578ba 575 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 571 1.8E-162 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 LK04_RS03040 5aa4fe5cd7f4411e484be5d6e0d578ba 575 SUPERFAMILY SSF64182 48 465 7.72E-118 T 22-04-2016 LK04_RS03040 5aa4fe5cd7f4411e484be5d6e0d578ba 575 Pfam PF02272 DHHA1 domain 380 447 1.1E-14 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 LK04_RS03040 5aa4fe5cd7f4411e484be5d6e0d578ba 575 PANTHER PTHR30255 5 575 1.4E-222 T 22-04-2016 LK04_RS03040 5aa4fe5cd7f4411e484be5d6e0d578ba 575 PANTHER PTHR30255:SF2 5 575 1.4E-222 T 22-04-2016 LK04_RS03040 5aa4fe5cd7f4411e484be5d6e0d578ba 575 Pfam PF01368 DHH family 74 207 1.2E-10 T 22-04-2016 IPR001667 DDH domain LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 Pfam PF12833 Helix-turn-helix domain 197 274 2.8E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 SUPERFAMILY SSF46689 227 276 1.39E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 Gene3D G3DSA:1.10.10.60 173 225 1.2E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 PANTHER PTHR11019 1 280 1.3E-122 T 22-04-2016 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 8.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 8.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 Gene3D G3DSA:1.10.10.60 226 275 1.1E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 SUPERFAMILY SSF51215 17 157 1.83E-11 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 SMART SM00342 189 272 7.1E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 1 279 46.521 T 22-04-2016 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 Pfam PF02311 AraC-like ligand binding domain 22 144 1.7E-17 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 PANTHER PTHR11019:SF107 1 280 1.3E-122 T 22-04-2016 LK04_RS08660 f5a22ced590e6c642af1416d5ed2123e 287 Gene3D G3DSA:2.60.120.280 12 156 5.5E-10 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 SUPERFAMILY SSF47384 210 280 3.53E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 3.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 PANTHER PTHR24423 166 435 5.4E-50 T 22-04-2016 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 PANTHER PTHR24423:SF559 166 435 5.4E-50 T 22-04-2016 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 SMART SM00304 172 225 1.2E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 Pfam PF00672 HAMP domain 155 222 8.1E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 Gene3D G3DSA:3.30.565.10 273 432 3.0E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 SMART SM00387 325 435 7.6E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 SUPERFAMILY SSF55874 283 432 1.7E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 Gene3D G3DSA:1.10.287.130 216 272 3.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 SMART SM00388 226 284 3.1E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS14475 fc7b267abf3b9d2334ce052779d5de44 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 434 6.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 SUPERFAMILY SSF55347 176 488 8.17E-113 T 22-04-2016 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 PIRSF PIRSF000110 1 491 4.3E-181 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 SUPERFAMILY SSF51735 4 189 1.2E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 Gene3D G3DSA:3.30.360.10 186 487 2.2E-120 T 22-04-2016 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 5.7E-116 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.175 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 PANTHER PTHR23429:SF0 1 489 2.6E-223 T 22-04-2016 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 Gene3D G3DSA:3.40.50.720 7 185 3.0E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 1.8E-58 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 PANTHER PTHR23429 1 489 2.6E-223 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 7.4E-201 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 1.0E-46 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 1.0E-46 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 1.0E-46 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 1.0E-46 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 1.0E-46 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS07465 05aebffa798b0430e1c403a3fe5cb1d5 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LK04_RS00270 1eb29167a0626d3504b8df38237515c6 338 Gene3D G3DSA:3.90.180.10 1 167 7.8E-36 T 22-04-2016 IPR011032 GroES-like LK04_RS00270 1eb29167a0626d3504b8df38237515c6 338 SUPERFAMILY SSF50129 1 166 1.52E-32 T 22-04-2016 IPR011032 GroES-like LK04_RS00270 1eb29167a0626d3504b8df38237515c6 338 SUPERFAMILY SSF51735 138 308 4.96E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00270 1eb29167a0626d3504b8df38237515c6 338 PANTHER PTHR11695:SF525 15 337 2.3E-111 T 22-04-2016 LK04_RS00270 1eb29167a0626d3504b8df38237515c6 338 PANTHER PTHR11695 15 337 2.3E-111 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS00270 1eb29167a0626d3504b8df38237515c6 338 SMART SM00829 10 336 1.0E-20 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS00270 1eb29167a0626d3504b8df38237515c6 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 4.2E-8 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS00270 1eb29167a0626d3504b8df38237515c6 338 Gene3D G3DSA:3.40.50.720 168 283 6.7E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00270 1eb29167a0626d3504b8df38237515c6 338 Pfam PF00107 Zinc-binding dehydrogenase 172 299 1.0E-33 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS12080 5c626fe8c55215e6cd017401f3afc954 428 Gene3D G3DSA:3.65.10.10 239 423 3.2E-73 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LK04_RS12080 5c626fe8c55215e6cd017401f3afc954 428 SUPERFAMILY SSF55205 4 424 1.07E-144 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 LK04_RS12080 5c626fe8c55215e6cd017401f3afc954 428 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS12080 5c626fe8c55215e6cd017401f3afc954 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 425 3.1E-140 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS12080 5c626fe8c55215e6cd017401f3afc954 428 PIRSF PIRSF000505 3 428 2.8E-155 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS12080 5c626fe8c55215e6cd017401f3afc954 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 421 2.1E-153 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LK04_RS12080 5c626fe8c55215e6cd017401f3afc954 428 PANTHER PTHR21090 3 425 2.6E-210 T 22-04-2016 LK04_RS12080 5c626fe8c55215e6cd017401f3afc954 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS12080 5c626fe8c55215e6cd017401f3afc954 428 Gene3D G3DSA:3.65.10.10 23 238 6.2E-67 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LK04_RS12080 5c626fe8c55215e6cd017401f3afc954 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 427 35.214 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 Gene3D G3DSA:2.40.50.140 49 117 1.8E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.263 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 PANTHER PTHR15184 160 416 2.3E-199 T 22-04-2016 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 PANTHER PTHR15184 19 141 2.3E-199 T 22-04-2016 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.6E-22 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 3.5E-222 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 Gene3D G3DSA:3.40.50.300 132 418 7.9E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 SMART SM00357 52 118 3.3E-18 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 SUPERFAMILY SSF68912 1 46 6.67E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.1E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 SUPERFAMILY SSF52540 90 371 2.71E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 Gene3D G3DSA:1.10.720.10 1 47 1.6E-21 T 22-04-2016 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 SMART SM00959 5 47 5.6E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.0E-15 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 PANTHER PTHR15184:SF34 160 416 2.3E-199 T 22-04-2016 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 PANTHER PTHR15184:SF34 19 141 2.3E-199 T 22-04-2016 LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 SUPERFAMILY SSF50249 48 125 1.88E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS18190 23d5fb2a9b6c15ca1cf525184774ca9c 419 SMART SM00382 170 355 5.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS09160 9115e173b2df24ff0c5fa6c10dde5a79 382 PANTHER PTHR30158:SF3 8 378 5.2E-147 T 22-04-2016 LK04_RS09160 9115e173b2df24ff0c5fa6c10dde5a79 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 367 2.4E-82 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS09160 9115e173b2df24ff0c5fa6c10dde5a79 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 285 3.2E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS09160 9115e173b2df24ff0c5fa6c10dde5a79 382 Gene3D G3DSA:2.40.50.100 60 92 1.1E-27 T 22-04-2016 LK04_RS09160 9115e173b2df24ff0c5fa6c10dde5a79 382 Gene3D G3DSA:2.40.50.100 167 200 1.1E-27 T 22-04-2016 LK04_RS09160 9115e173b2df24ff0c5fa6c10dde5a79 382 SUPERFAMILY SSF111369 46 292 5.1E-81 T 22-04-2016 LK04_RS09160 9115e173b2df24ff0c5fa6c10dde5a79 382 PANTHER PTHR30158 8 378 5.2E-147 T 22-04-2016 LK04_RS05650 ceb44b6738ea0bc2fd28023f66e3db34 213 PANTHER PTHR16557 50 210 2.2E-50 T 22-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 LK04_RS05650 ceb44b6738ea0bc2fd28023f66e3db34 213 SUPERFAMILY SSF51197 18 211 3.43E-59 T 22-04-2016 LK04_RS05650 ceb44b6738ea0bc2fd28023f66e3db34 213 Gene3D G3DSA:2.60.120.590 19 212 1.3E-56 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like LK04_RS05650 ceb44b6738ea0bc2fd28023f66e3db34 213 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 32 210 1.4E-54 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like LK04_RS05725 9128f2a55d3d7e2c64d6dfd7fe4c1496 363 SUPERFAMILY SSF161098 129 345 1.14E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05725 9128f2a55d3d7e2c64d6dfd7fe4c1496 363 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 151 358 2.2E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05725 9128f2a55d3d7e2c64d6dfd7fe4c1496 363 PANTHER PTHR30465:SF66 69 360 1.3E-216 T 22-04-2016 LK04_RS05725 9128f2a55d3d7e2c64d6dfd7fe4c1496 363 PANTHER PTHR30465:SF66 1 45 1.3E-216 T 22-04-2016 LK04_RS05725 9128f2a55d3d7e2c64d6dfd7fe4c1496 363 PANTHER PTHR30465 69 360 1.3E-216 T 22-04-2016 LK04_RS05725 9128f2a55d3d7e2c64d6dfd7fe4c1496 363 PANTHER PTHR30465 1 45 1.3E-216 T 22-04-2016 LK04_RS05725 9128f2a55d3d7e2c64d6dfd7fe4c1496 363 Gene3D G3DSA:1.10.3720.10 127 350 7.7E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18490 ecd99a80f41f74128ac27ddc56af4700 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 292 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS18490 ecd99a80f41f74128ac27ddc56af4700 446 Gene3D G3DSA:3.90.1150.10 327 444 3.0E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS18490 ecd99a80f41f74128ac27ddc56af4700 446 Gene3D G3DSA:3.40.640.10 80 326 8.5E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS18490 ecd99a80f41f74128ac27ddc56af4700 446 Pfam PF00202 Aminotransferase class-III 48 439 2.0E-79 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS18490 ecd99a80f41f74128ac27ddc56af4700 446 PANTHER PTHR11986 27 444 6.5E-152 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS18490 ecd99a80f41f74128ac27ddc56af4700 446 PANTHER PTHR11986 1 11 6.5E-152 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS18490 ecd99a80f41f74128ac27ddc56af4700 446 SUPERFAMILY SSF53383 40 444 1.48E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS18490 ecd99a80f41f74128ac27ddc56af4700 446 PANTHER PTHR11986:SF23 27 444 6.5E-152 T 22-04-2016 LK04_RS18490 ecd99a80f41f74128ac27ddc56af4700 446 PANTHER PTHR11986:SF23 1 11 6.5E-152 T 22-04-2016 LK04_RS15330 e0e19ee3314a65e2c85a2a9e446793c3 462 Gene3D G3DSA:3.40.50.300 193 457 1.0E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15330 e0e19ee3314a65e2c85a2a9e446793c3 462 Gene3D G3DSA:3.30.450.90 61 188 1.3E-42 T 22-04-2016 LK04_RS15330 e0e19ee3314a65e2c85a2a9e446793c3 462 SUPERFAMILY SSF52540 81 456 1.59E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15330 e0e19ee3314a65e2c85a2a9e446793c3 462 PANTHER PTHR30258:SF1 66 458 1.4E-172 T 22-04-2016 LK04_RS15330 e0e19ee3314a65e2c85a2a9e446793c3 462 Pfam PF00437 Type II/IV secretion system protein 95 355 9.1E-76 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LK04_RS15330 e0e19ee3314a65e2c85a2a9e446793c3 462 PANTHER PTHR30258 66 458 1.4E-172 T 22-04-2016 LK04_RS15330 e0e19ee3314a65e2c85a2a9e446793c3 462 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 283 297 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 Gene3D G3DSA:3.40.50.970 331 536 4.0E-80 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 Gene3D G3DSA:3.40.50.970 4 324 1.3E-131 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 SUPERFAMILY SSF52518 5 332 1.93E-118 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 SUPERFAMILY SSF52518 338 529 2.18E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 Pfam PF02780 Transketolase, C-terminal domain 543 658 7.8E-18 T 22-04-2016 IPR033248 Transketolase, C-terminal domain LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 SUPERFAMILY SSF52922 535 667 9.55E-42 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 Pfam PF02779 Transketolase, pyrimidine binding domain 357 526 3.1E-47 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 SMART SM00861 358 529 1.5E-67 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 666 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 PANTHER PTHR11624:SF85 1 313 0.0 T 22-04-2016 LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 PANTHER PTHR11624:SF85 337 666 0.0 T 22-04-2016 LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 337 5.5E-169 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 Gene3D G3DSA:3.40.50.920 541 667 1.3E-47 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 PANTHER PTHR11624 1 313 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS04570 53a7ac518deb2f60a0ec54995d57a854 669 PANTHER PTHR11624 337 666 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS14755 8c441c07d3e5b0c94259d2b3621702a7 493 PANTHER PTHR30618:SF6 12 493 2.2E-260 T 22-04-2016 LK04_RS14755 8c441c07d3e5b0c94259d2b3621702a7 493 PANTHER PTHR30618 12 493 2.2E-260 T 22-04-2016 LK04_RS14755 8c441c07d3e5b0c94259d2b3621702a7 493 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 28 461 1.5E-80 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 LK04_RS03870 4b062e6d9aba7b9b73fdcee7d008e145 221 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS03870 4b062e6d9aba7b9b73fdcee7d008e145 221 Gene3D G3DSA:3.40.50.300 1 220 4.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03870 4b062e6d9aba7b9b73fdcee7d008e145 221 Pfam PF00005 ABC transporter 22 169 6.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS03870 4b062e6d9aba7b9b73fdcee7d008e145 221 SMART SM00382 30 218 2.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS03870 4b062e6d9aba7b9b73fdcee7d008e145 221 PANTHER PTHR24220 3 221 3.6E-80 T 22-04-2016 LK04_RS03870 4b062e6d9aba7b9b73fdcee7d008e145 221 SUPERFAMILY SSF52540 1 220 9.02E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19525 8ee7d5468a70d47a54d590edfbd8257a 232 SUPERFAMILY SSF46894 127 228 2.66E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS19525 8ee7d5468a70d47a54d590edfbd8257a 232 SMART SM00448 2 111 6.2E-47 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS19525 8ee7d5468a70d47a54d590edfbd8257a 232 Pfam PF00072 Response regulator receiver domain 4 112 8.7E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS19525 8ee7d5468a70d47a54d590edfbd8257a 232 PANTHER PTHR26402 2 231 2.4E-80 T 22-04-2016 LK04_RS19525 8ee7d5468a70d47a54d590edfbd8257a 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 8.5E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS19525 8ee7d5468a70d47a54d590edfbd8257a 232 SMART SM00862 152 228 1.1E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS19525 8ee7d5468a70d47a54d590edfbd8257a 232 Gene3D G3DSA:3.40.50.2300 2 132 2.5E-42 T 22-04-2016 LK04_RS19525 8ee7d5468a70d47a54d590edfbd8257a 232 SUPERFAMILY SSF52172 2 126 2.56E-41 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS19525 8ee7d5468a70d47a54d590edfbd8257a 232 Gene3D G3DSA:1.10.10.10 133 229 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19525 8ee7d5468a70d47a54d590edfbd8257a 232 PANTHER PTHR26402:SF117 2 231 2.4E-80 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-91 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-91 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 1.7E-91 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.7E-91 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.7E-91 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.7E-91 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.7E-91 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 1.7E-91 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.7E-91 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 Gene3D G3DSA:3.30.70.1430 41 141 1.4E-31 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 SUPERFAMILY SSF82714 729 815 4.84E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PANTHER PTHR32063:SF11 1 1042 0.0 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 SUPERFAMILY SSF82866 299 499 7.72E-50 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 Gene3D G3DSA:3.30.2090.10 729 815 7.3E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 Gene3D G3DSA:3.30.2090.10 184 278 4.4E-29 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 PANTHER PTHR32063 1 1042 0.0 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 Gene3D G3DSA:1.10.3850.10 284 500 2.3E-60 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 Gene3D G3DSA:1.20.1640.10 858 1041 1.3E-44 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 Gene3D G3DSA:3.30.70.1430 579 677 3.1E-22 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 SUPERFAMILY SSF82693 41 134 3.66E-26 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 Gene3D G3DSA:3.30.70.1440 824 857 4.0E-16 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 Gene3D G3DSA:3.30.70.1440 679 727 4.0E-16 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 SUPERFAMILY SSF82693 575 678 1.15E-21 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1046 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 SUPERFAMILY SSF82866 813 1037 2.35E-42 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 SUPERFAMILY SSF82693 277 333 6.98E-26 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 SUPERFAMILY SSF82693 139 184 6.98E-26 T 22-04-2016 LK04_RS09655 3ab0784c02148a8117000d084c3f34a9 1050 SUPERFAMILY SSF82714 185 275 5.75E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS07205 275468711eea861b1168d699bc925dac 285 Pfam PF00288 GHMP kinases N terminal domain 92 148 1.9E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 LK04_RS07205 275468711eea861b1168d699bc925dac 285 SUPERFAMILY SSF54211 1 162 2.5E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS07205 275468711eea861b1168d699bc925dac 285 PANTHER PTHR20861 1 281 1.1E-98 T 22-04-2016 LK04_RS07205 275468711eea861b1168d699bc925dac 285 Pfam PF08544 GHMP kinases C terminal 199 259 1.8E-6 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LK04_RS07205 275468711eea861b1168d699bc925dac 285 SUPERFAMILY SSF55060 165 281 7.91E-36 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LK04_RS07205 275468711eea861b1168d699bc925dac 285 PANTHER PTHR20861:SF2 1 281 1.1E-98 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS07205 275468711eea861b1168d699bc925dac 285 PIRSF PIRSF010376 1 283 1.0E-86 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS07205 275468711eea861b1168d699bc925dac 285 Gene3D G3DSA:3.30.70.890 166 282 4.1E-43 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LK04_RS07205 275468711eea861b1168d699bc925dac 285 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 282 1.3E-105 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS07205 275468711eea861b1168d699bc925dac 285 Gene3D G3DSA:3.30.230.10 4 163 9.6E-55 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS07205 275468711eea861b1168d699bc925dac 285 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.592 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS15890 b946343506ffb3d0ae10b0161b8e569e 521 Gene3D G3DSA:1.25.10.10 111 218 4.7E-9 T 22-04-2016 IPR011989 Armadillo-like helical LK04_RS15890 b946343506ffb3d0ae10b0161b8e569e 521 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 227 518 5.4E-130 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type LK04_RS15890 b946343506ffb3d0ae10b0161b8e569e 521 PANTHER PTHR11795 93 521 6.5E-174 T 22-04-2016 LK04_RS15890 b946343506ffb3d0ae10b0161b8e569e 521 PANTHER PTHR11795:SF349 93 521 6.5E-174 T 22-04-2016 LK04_RS15890 b946343506ffb3d0ae10b0161b8e569e 521 SUPERFAMILY SSF48371 111 217 1.15E-8 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 LK04_RS15890 b946343506ffb3d0ae10b0161b8e569e 521 Pfam PF02653 Branched-chain amino acid transport system / permease component 229 504 2.1E-52 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS05805 996955ff328d003fcd900edc7bba9730 262 Pfam PF00005 ABC transporter 28 165 1.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS05805 996955ff328d003fcd900edc7bba9730 262 PANTHER PTHR24220 6 241 5.1E-64 T 22-04-2016 LK04_RS05805 996955ff328d003fcd900edc7bba9730 262 Gene3D G3DSA:3.40.50.300 3 237 1.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05805 996955ff328d003fcd900edc7bba9730 262 SUPERFAMILY SSF52540 5 228 3.03E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05805 996955ff328d003fcd900edc7bba9730 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS05805 996955ff328d003fcd900edc7bba9730 262 SMART SM00382 30 215 3.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS14320 d05c354feb3102caed497218d8afd155 435 Gene3D G3DSA:1.20.1250.20 215 403 1.8E-31 T 22-04-2016 LK04_RS14320 d05c354feb3102caed497218d8afd155 435 Gene3D G3DSA:1.20.1250.20 11 193 1.6E-36 T 22-04-2016 LK04_RS14320 d05c354feb3102caed497218d8afd155 435 SUPERFAMILY SSF103473 10 243 6.67E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS14320 d05c354feb3102caed497218d8afd155 435 PANTHER PTHR23504 1 431 3.7E-99 T 22-04-2016 LK04_RS14320 d05c354feb3102caed497218d8afd155 435 Pfam PF07690 Major Facilitator Superfamily 15 260 1.6E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS14320 d05c354feb3102caed497218d8afd155 435 PRINTS PR01035 Tetracycline resistance protein signature 110 131 2.94E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS14320 d05c354feb3102caed497218d8afd155 435 PRINTS PR01035 Tetracycline resistance protein signature 21 37 2.94E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS14320 d05c354feb3102caed497218d8afd155 435 PRINTS PR01035 Tetracycline resistance protein signature 345 368 2.94E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS14320 d05c354feb3102caed497218d8afd155 435 PRINTS PR01035 Tetracycline resistance protein signature 140 162 2.94E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS14320 d05c354feb3102caed497218d8afd155 435 PRINTS PR01035 Tetracycline resistance protein signature 83 107 2.94E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS14320 d05c354feb3102caed497218d8afd155 435 SUPERFAMILY SSF103473 214 401 1.06E-34 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS14320 d05c354feb3102caed497218d8afd155 435 PANTHER PTHR23504:SF14 1 431 3.7E-99 T 22-04-2016 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 SUPERFAMILY SSF50249 223 642 4.85E-141 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 5.7E-15 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 58.059 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 Pfam PF00575 S1 RNA binding domain 642 724 4.6E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 SUPERFAMILY SSF50249 645 725 2.08E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 PANTHER PTHR23355 1 811 0.0 T 22-04-2016 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 Pfam PF08206 Ribonuclease B OB domain 87 144 3.2E-20 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 Pfam PF08206 Ribonuclease B OB domain 158 213 9.2E-5 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 7.7E-280 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 726 1.2E-271 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 SUPERFAMILY SSF50249 138 236 1.14E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 SUPERFAMILY SSF50249 67 147 9.68E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 SMART SM00316 643 726 9.3E-13 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 PANTHER PTHR23355:SF9 1 811 0.0 T 22-04-2016 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 Gene3D G3DSA:2.40.50.140 645 729 3.4E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 SMART SM00955 260 588 2.3E-182 T 22-04-2016 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 Gene3D G3DSA:3.90.1570.10 107 233 5.2E-4 T 22-04-2016 IPR012296 Nuclease, putative, TT1808 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 SMART SM00357 86 145 1.8E-12 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 LK04_RS01375 f94b39ff4bdf27f5271da5c6a4560a12 815 Pfam PF00773 RNB domain 260 587 5.0E-107 T 22-04-2016 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 SUPERFAMILY SSF51569 2 289 5.76E-76 T 22-04-2016 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 6.2E-63 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 Gene3D G3DSA:3.20.20.70 2 292 1.5E-86 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 PANTHER PTHR12128 1 292 1.5E-80 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 1.8E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 1.8E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 1.8E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 1.8E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 SMART SM01130 4 293 2.8E-90 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS15200 5cc0c791a094f78a44a73e9894de3d88 294 PIRSF PIRSF001365 1 294 4.0E-72 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 67 4.0E-10 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 Gene3D G3DSA:3.90.100.10 589 713 4.7E-37 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 SUPERFAMILY SSF53383 105 562 3.56E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 Gene3D G3DSA:3.40.50.220 1 104 9.5E-26 T 22-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 SUPERFAMILY SSF55904 568 711 1.1E-43 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 Gene3D G3DSA:3.90.1150.10 417 588 2.7E-71 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 PIRSF PIRSF009393 1 714 1.0E-285 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 PANTHER PTHR11751 106 576 4.2E-209 T 22-04-2016 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 346 360 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 PANTHER PTHR11751:SF425 106 576 4.2E-209 T 22-04-2016 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 SUPERFAMILY SSF52172 1 104 1.64E-19 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 105 547 1.1E-194 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 Gene3D G3DSA:3.40.640.10 105 414 1.8E-115 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS02645 9cbab573d378c8a5ea91302a1d7798fc 715 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 572 701 1.0E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LK04_RS13330 ff39ae6230ca52ba2467f9740502d237 246 Gene3D G3DSA:1.10.3720.10 23 238 2.2E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS13330 ff39ae6230ca52ba2467f9740502d237 246 PANTHER PTHR30085:SF4 1 244 1.3E-150 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 LK04_RS13330 ff39ae6230ca52ba2467f9740502d237 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 238 3.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS13330 ff39ae6230ca52ba2467f9740502d237 246 SUPERFAMILY SSF161098 24 223 1.19E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS13330 ff39ae6230ca52ba2467f9740502d237 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 132 4.8E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS13330 ff39ae6230ca52ba2467f9740502d237 246 PANTHER PTHR30085 1 244 1.3E-150 T 22-04-2016 LK04_RS15965 55d3c4b38d36b4cd1013eaa751979b31 440 Pfam PF07804 HipA-like C-terminal domain 317 401 7.3E-10 T 22-04-2016 IPR012893 HipA-like, C-terminal LK04_RS15965 55d3c4b38d36b4cd1013eaa751979b31 440 PANTHER PTHR37419:SF2 43 423 6.1E-91 T 22-04-2016 LK04_RS15965 55d3c4b38d36b4cd1013eaa751979b31 440 PANTHER PTHR37419 43 423 6.1E-91 T 22-04-2016 LK04_RS15965 55d3c4b38d36b4cd1013eaa751979b31 440 Pfam PF07805 HipA-like N-terminal domain 201 280 1.9E-10 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 LK04_RS00040 ebbfe93923312108529cfc381bdc5aef 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 2.0E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00040 ebbfe93923312108529cfc381bdc5aef 309 SUPERFAMILY SSF161098 91 290 4.25E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00040 ebbfe93923312108529cfc381bdc5aef 309 Gene3D G3DSA:1.10.3720.10 89 300 4.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00040 ebbfe93923312108529cfc381bdc5aef 309 PANTHER PTHR30465:SF59 1 305 1.6E-132 T 22-04-2016 LK04_RS00040 ebbfe93923312108529cfc381bdc5aef 309 PANTHER PTHR30465 1 305 1.6E-132 T 22-04-2016 LK04_RS19890 ebbfe93923312108529cfc381bdc5aef 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 2.0E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19890 ebbfe93923312108529cfc381bdc5aef 309 SUPERFAMILY SSF161098 91 290 4.25E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19890 ebbfe93923312108529cfc381bdc5aef 309 Gene3D G3DSA:1.10.3720.10 89 300 4.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19890 ebbfe93923312108529cfc381bdc5aef 309 PANTHER PTHR30465:SF59 1 305 1.6E-132 T 22-04-2016 LK04_RS19890 ebbfe93923312108529cfc381bdc5aef 309 PANTHER PTHR30465 1 305 1.6E-132 T 22-04-2016 LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.1E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.1E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.1E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PANTHER PTHR24322 156 187 2.7E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PANTHER PTHR24322 12 140 2.7E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 262 1.3E-65 T 22-04-2016 LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 3.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 SUPERFAMILY SSF51735 7 262 2.2E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10600 4522718cb46884da3c92c328308c8a50 265 Gene3D G3DSA:3.40.50.720 1 263 1.1E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 Gene3D G3DSA:1.20.5.100 58 99 1.9E-22 T 22-04-2016 LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 SUPERFAMILY SSF52540 108 190 6.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 Gene3D G3DSA:1.10.3810.10 208 384 1.3E-63 T 22-04-2016 LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 Gene3D G3DSA:3.30.2060.10 114 203 8.0E-33 T 22-04-2016 LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 PIRSF PIRSF002799 42 841 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 71 799 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 Pfam PF14814 Bifunctional transglycosylase second domain 116 200 4.6E-29 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 82 6.6E-28 T 22-04-2016 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 PANTHER PTHR32282 197 830 1.2E-298 T 22-04-2016 LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 Gene3D G3DSA:3.40.710.10 385 790 1.6E-107 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 PANTHER PTHR32282:SF11 197 830 1.2E-298 T 22-04-2016 LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 Pfam PF00912 Transglycosylase 212 383 3.2E-55 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 Pfam PF00905 Penicillin binding protein transpeptidase domain 476 729 4.8E-25 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 SUPERFAMILY SSF56601 365 387 3.0E-107 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 SUPERFAMILY SSF56601 415 791 3.0E-107 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS15080 57077f2540d6b804f5d00be6ad846595 843 SUPERFAMILY SSF53955 201 406 3.09E-66 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS04460 c3618c8da156794a1e45b3acebcb6c74 120 Gene3D G3DSA:3.40.30.10 3 116 1.5E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS04460 c3618c8da156794a1e45b3acebcb6c74 120 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 116 3.0E-34 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR LK04_RS04460 c3618c8da156794a1e45b3acebcb6c74 120 SUPERFAMILY SSF52833 3 116 5.54E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS04460 c3618c8da156794a1e45b3acebcb6c74 120 Pfam PF03960 ArsC family 6 115 2.8E-17 T 22-04-2016 IPR006660 Arsenate reductase-like LK04_RS04460 c3618c8da156794a1e45b3acebcb6c74 120 PANTHER PTHR30041:SF3 1 118 1.3E-39 T 22-04-2016 LK04_RS04460 c3618c8da156794a1e45b3acebcb6c74 120 PANTHER PTHR30041 1 118 1.3E-39 T 22-04-2016 LK04_RS15905 3c678e4476356268df06c2afe23d7f3c 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 2.5E-106 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE LK04_RS15905 3c678e4476356268df06c2afe23d7f3c 232 PANTHER PTHR24220:SF404 3 232 5.6E-136 T 22-04-2016 LK04_RS15905 3c678e4476356268df06c2afe23d7f3c 232 Pfam PF00005 ABC transporter 17 161 1.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS15905 3c678e4476356268df06c2afe23d7f3c 232 Gene3D G3DSA:3.40.50.300 1 219 1.8E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15905 3c678e4476356268df06c2afe23d7f3c 232 SMART SM00382 26 211 1.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS15905 3c678e4476356268df06c2afe23d7f3c 232 PANTHER PTHR24220 3 232 5.6E-136 T 22-04-2016 LK04_RS15905 3c678e4476356268df06c2afe23d7f3c 232 SUPERFAMILY SSF52540 2 219 4.99E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02610 2b117ead4a603fe7b70197d7cc889650 789 Pfam PF00593 TonB dependent receptor 488 787 4.2E-34 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS02610 2b117ead4a603fe7b70197d7cc889650 789 PANTHER PTHR32552:SF18 58 789 2.0E-94 T 22-04-2016 LK04_RS02610 2b117ead4a603fe7b70197d7cc889650 789 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 772 789 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site LK04_RS02610 2b117ead4a603fe7b70197d7cc889650 789 Gene3D G3DSA:2.170.130.10 58 190 8.7E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS02610 2b117ead4a603fe7b70197d7cc889650 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 185 4.3E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS02610 2b117ead4a603fe7b70197d7cc889650 789 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 53 789 1.3E-99 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 LK04_RS02610 2b117ead4a603fe7b70197d7cc889650 789 SUPERFAMILY SSF56935 46 789 1.5E-92 T 22-04-2016 LK04_RS02610 2b117ead4a603fe7b70197d7cc889650 789 PANTHER PTHR32552 58 789 2.0E-94 T 22-04-2016 LK04_RS02610 2b117ead4a603fe7b70197d7cc889650 789 Gene3D G3DSA:2.40.170.20 191 789 1.9E-94 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS11860 bbe463bfcf43b4b8d5e85e3cb6f1d74b 163 Gene3D G3DSA:3.40.50.300 26 142 7.9E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11860 bbe463bfcf43b4b8d5e85e3cb6f1d74b 163 PIRSF PIRSF003093 3 163 1.1E-52 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 LK04_RS11860 bbe463bfcf43b4b8d5e85e3cb6f1d74b 163 Pfam PF03846 Cell division inhibitor SulA 15 114 2.7E-42 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 LK04_RS11860 bbe463bfcf43b4b8d5e85e3cb6f1d74b 163 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 163 29.271 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 LK04_RS11860 bbe463bfcf43b4b8d5e85e3cb6f1d74b 163 PANTHER PTHR35369 5 163 5.2E-32 T 22-04-2016 LK04_RS11860 bbe463bfcf43b4b8d5e85e3cb6f1d74b 163 SUPERFAMILY SSF52540 26 141 8.5E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06420 303f00ae4fd644fa4acc164cd7fc1764 445 Gene3D G3DSA:3.20.20.30 347 432 7.8E-133 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS06420 303f00ae4fd644fa4acc164cd7fc1764 445 Gene3D G3DSA:3.20.20.30 3 306 7.8E-133 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS06420 303f00ae4fd644fa4acc164cd7fc1764 445 Pfam PF00296 Luciferase-like monooxygenase 21 381 5.8E-64 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS06420 303f00ae4fd644fa4acc164cd7fc1764 445 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 426 9.1E-166 T 22-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LK04_RS06420 303f00ae4fd644fa4acc164cd7fc1764 445 SUPERFAMILY SSF51679 5 432 1.7E-130 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS06420 303f00ae4fd644fa4acc164cd7fc1764 445 PIRSF PIRSF000337 3 441 3.1E-147 T 22-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LK04_RS06420 303f00ae4fd644fa4acc164cd7fc1764 445 PANTHER PTHR30011 1 445 1.4E-223 T 22-04-2016 LK04_RS06420 303f00ae4fd644fa4acc164cd7fc1764 445 PANTHER PTHR30011:SF22 1 445 1.4E-223 T 22-04-2016 LK04_RS18810 6e63f770d8e2fe8a83aba1f605e522aa 291 Pfam PF05035 2-keto-3-deoxy-galactonokinase 8 284 1.1E-93 T 22-04-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130|UniPathway: UPA00081 LK04_RS14795 e35b38b23cb5a3016ec38b69a92c398f 392 Pfam PF07690 Major Facilitator Superfamily 9 320 1.3E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS14795 e35b38b23cb5a3016ec38b69a92c398f 392 Gene3D G3DSA:1.20.1250.20 199 378 6.4E-19 T 22-04-2016 LK04_RS14795 e35b38b23cb5a3016ec38b69a92c398f 392 PRINTS PR01035 Tetracycline resistance protein signature 40 59 4.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS14795 e35b38b23cb5a3016ec38b69a92c398f 392 PRINTS PR01035 Tetracycline resistance protein signature 98 119 4.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS14795 e35b38b23cb5a3016ec38b69a92c398f 392 PRINTS PR01035 Tetracycline resistance protein signature 158 178 4.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS14795 e35b38b23cb5a3016ec38b69a92c398f 392 PRINTS PR01035 Tetracycline resistance protein signature 10 26 4.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LK04_RS14795 e35b38b23cb5a3016ec38b69a92c398f 392 Gene3D G3DSA:1.20.1250.20 5 183 1.3E-27 T 22-04-2016 LK04_RS14795 e35b38b23cb5a3016ec38b69a92c398f 392 SUPERFAMILY SSF103473 3 380 6.41E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS14795 e35b38b23cb5a3016ec38b69a92c398f 392 PANTHER PTHR23501 1 387 1.2E-167 T 22-04-2016 LK04_RS14795 e35b38b23cb5a3016ec38b69a92c398f 392 PANTHER PTHR23501:SF4 1 387 1.2E-167 T 22-04-2016 LK04_RS04550 18e7f4feff40cd1dfc2ea6d3ce390ff1 327 Pfam PF13407 Periplasmic binding protein domain 28 282 1.9E-47 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS04550 18e7f4feff40cd1dfc2ea6d3ce390ff1 327 PANTHER PTHR32196 7 325 3.0E-141 T 22-04-2016 LK04_RS04550 18e7f4feff40cd1dfc2ea6d3ce390ff1 327 Gene3D G3DSA:3.40.50.2300 148 276 7.9E-23 T 22-04-2016 LK04_RS04550 18e7f4feff40cd1dfc2ea6d3ce390ff1 327 SUPERFAMILY SSF53822 24 300 1.22E-59 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS04550 18e7f4feff40cd1dfc2ea6d3ce390ff1 327 PANTHER PTHR32196:SF36 7 325 3.0E-141 T 22-04-2016 LK04_RS04550 18e7f4feff40cd1dfc2ea6d3ce390ff1 327 Gene3D G3DSA:3.40.50.2300 24 147 4.8E-28 T 22-04-2016 LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 SUPERFAMILY SSF53335 182 262 1.05E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 SUPERFAMILY SSF53335 547 603 1.05E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 SUPERFAMILY SSF53335 4 150 1.05E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 SUPERFAMILY SSF53335 311 327 1.05E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 121 1.4E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 Gene3D G3DSA:3.40.50.150 181 209 6.3E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 Gene3D G3DSA:3.40.50.150 5 124 6.3E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 PANTHER PTHR10629 4 150 9.3E-41 T 22-04-2016 LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 PANTHER PTHR10629 182 283 9.3E-41 T 22-04-2016 LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 PANTHER PTHR10629:SF32 4 150 9.3E-41 T 22-04-2016 LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 PANTHER PTHR10629:SF32 182 283 9.3E-41 T 22-04-2016 LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 Gene3D G3DSA:3.90.120.10 210 263 2.3E-17 T 22-04-2016 LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 Gene3D G3DSA:3.90.120.10 534 596 2.3E-17 T 22-04-2016 LK04_RS10010 8a6ab2b3ef62a97465e5f9c2e3e4f8de 619 Gene3D G3DSA:3.90.120.10 406 442 2.3E-17 T 22-04-2016 LK04_RS15375 56e6625e237385c49c7ca5a33b50f14d 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 49.056 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 LK04_RS15375 56e6625e237385c49c7ca5a33b50f14d 305 Gene3D G3DSA:3.30.230.20 3 125 1.1E-45 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 LK04_RS15375 56e6625e237385c49c7ca5a33b50f14d 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 300 3.1E-156 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 LK04_RS15375 56e6625e237385c49c7ca5a33b50f14d 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.5E-107 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 LK04_RS15375 56e6625e237385c49c7ca5a33b50f14d 305 PANTHER PTHR33694 1 305 7.5E-143 T 22-04-2016 LK04_RS15375 56e6625e237385c49c7ca5a33b50f14d 305 PANTHER PTHR33694:SF1 1 305 7.5E-143 T 22-04-2016 LK04_RS15375 56e6625e237385c49c7ca5a33b50f14d 305 Gene3D G3DSA:3.30.1700.10 129 283 9.2E-61 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 LK04_RS15375 56e6625e237385c49c7ca5a33b50f14d 305 SUPERFAMILY SSF54211 3 124 9.1E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS15375 56e6625e237385c49c7ca5a33b50f14d 305 SUPERFAMILY SSF54211 134 278 1.44E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS08625 b11882b4c604cf517cacec910ed128e4 531 Gene3D G3DSA:3.90.76.10 34 214 4.9E-48 T 22-04-2016 LK04_RS08625 b11882b4c604cf517cacec910ed128e4 531 SUPERFAMILY SSF53850 24 528 1.05E-155 T 22-04-2016 LK04_RS08625 b11882b4c604cf517cacec910ed128e4 531 PANTHER PTHR30290 5 531 2.0E-206 T 22-04-2016 LK04_RS08625 b11882b4c604cf517cacec910ed128e4 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 449 1.8E-105 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS08625 b11882b4c604cf517cacec910ed128e4 531 PANTHER PTHR30290:SF14 5 531 2.0E-206 T 22-04-2016 LK04_RS08625 b11882b4c604cf517cacec910ed128e4 531 Gene3D G3DSA:3.10.105.10 287 500 5.8E-70 T 22-04-2016 LK04_RS08625 b11882b4c604cf517cacec910ed128e4 531 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 74 96 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site LK04_RS08625 b11882b4c604cf517cacec910ed128e4 531 PIRSF PIRSF002741 20 530 3.5E-119 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 1.1E-45 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 1.1E-45 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 1.1E-45 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 1.1E-45 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 Pfam PF08544 GHMP kinases C terminal 279 361 3.5E-12 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 SUPERFAMILY SSF55060 205 381 5.94E-51 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 Gene3D G3DSA:3.30.70.890 208 380 2.4E-61 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PANTHER PTHR10457 8 381 1.8E-150 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 Gene3D G3DSA:3.30.230.10 8 207 8.0E-79 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 Pfam PF00288 GHMP kinases N terminal domain 114 181 8.6E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 TIGRFAM TIGR00131 gal_kin: galactokinase 7 381 6.5E-161 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 SUPERFAMILY SSF54211 8 203 1.52E-63 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PRINTS PR00473 Galactokinase signature 92 103 1.9E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PRINTS PR00473 Galactokinase signature 112 130 1.9E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PRINTS PR00473 Galactokinase signature 263 277 1.9E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PRINTS PR00473 Galactokinase signature 27 45 1.9E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 Hamap MF_00246 Galactokinase [galK]. 25 381 44.198 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PANTHER PTHR10457:SF6 8 381 1.8E-150 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 Pfam PF10509 Galactokinase galactose-binding signature 10 58 1.1E-22 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 PIRSF PIRSF000530 2 382 1.1E-124 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12945 6a44f1ba5bd053ecff32d5147e6dae5c 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 LK04_RS07910 214bc58390bde31f9f2313b2a037c2ac 177 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 2.9E-46 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 LK04_RS07910 214bc58390bde31f9f2313b2a037c2ac 177 PANTHER PTHR36570:SF2 1 177 1.5E-95 T 22-04-2016 LK04_RS07910 214bc58390bde31f9f2313b2a037c2ac 177 Gene3D G3DSA:1.20.1550.10 1 175 2.8E-69 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain LK04_RS07910 214bc58390bde31f9f2313b2a037c2ac 177 SUPERFAMILY SSF158442 15 162 8.63E-46 T 22-04-2016 LK04_RS07910 214bc58390bde31f9f2313b2a037c2ac 177 PANTHER PTHR36570 1 177 1.5E-95 T 22-04-2016 LK04_RS07910 214bc58390bde31f9f2313b2a037c2ac 177 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 168 22.708 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB LK04_RS06840 207aab511c57d4a138b5c5157d5ff50c 158 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 1.4E-28 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 LK04_RS06840 207aab511c57d4a138b5c5157d5ff50c 158 Gene3D G3DSA:3.40.960.10 21 154 2.2E-47 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 LK04_RS06840 207aab511c57d4a138b5c5157d5ff50c 158 PIRSF PIRSF018267 1 150 4.3E-49 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 LK04_RS06840 207aab511c57d4a138b5c5157d5ff50c 158 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 1.1E-44 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 LK04_RS06840 207aab511c57d4a138b5c5157d5ff50c 158 SUPERFAMILY SSF52980 2 153 2.63E-50 T 22-04-2016 IPR011335 Restriction endonuclease type II-like LK04_RS08675 b906787e1a1ad01b60e7d63c9a3f6d8d 418 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 418 264.44 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 LK04_RS08675 b906787e1a1ad01b60e7d63c9a3f6d8d 418 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 22-04-2016 LK04_RS08675 b906787e1a1ad01b60e7d63c9a3f6d8d 418 SUPERFAMILY SSF51658 5 416 1.22E-83 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS08675 b906787e1a1ad01b60e7d63c9a3f6d8d 418 PANTHER PTHR30268 1 418 1.2E-216 T 22-04-2016 LK04_RS08675 b906787e1a1ad01b60e7d63c9a3f6d8d 418 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 416 1.6E-230 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 LK04_RS08675 b906787e1a1ad01b60e7d63c9a3f6d8d 418 Pfam PF06134 L-rhamnose isomerase (RhaA) 5 416 7.9E-223 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 LK04_RS08675 b906787e1a1ad01b60e7d63c9a3f6d8d 418 Gene3D G3DSA:3.20.20.150 3 418 6.0E-221 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 PANTHER PTHR10066:SF72 597 1029 0.0 T 22-04-2016 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 PANTHER PTHR10066:SF72 8 579 0.0 T 22-04-2016 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 SUPERFAMILY SSF74650 739 1025 5.81E-86 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 338 631 1.1E-115 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Gene3D G3DSA:2.70.98.10 740 1025 4.9E-84 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 388 413 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 55 219 1.9E-63 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 SUPERFAMILY SSF51445 338 627 6.47E-100 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Gene3D G3DSA:3.20.20.80 338 626 1.7E-113 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Gene3D G3DSA:2.60.120.260 10 208 3.4E-83 T 22-04-2016 IPR008979 Galactose-binding domain-like LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 PANTHER PTHR10066 597 1029 0.0 T 22-04-2016 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 PANTHER PTHR10066 8 579 0.0 T 22-04-2016 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 SUPERFAMILY SSF49303 221 336 5.76E-22 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Gene3D G3DSA:2.60.40.320 209 336 2.4E-30 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Pfam PF00703 Glycosyl hydrolases family 2 223 336 5.3E-12 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 SUPERFAMILY SSF49785 15 219 6.09E-68 T 22-04-2016 IPR008979 Galactose-binding domain-like LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 450 464 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Hamap MF_01687 Beta-galactosidase [lacZ]. 6 1027 17.2 T 22-04-2016 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 SUPERFAMILY SSF49303 625 730 9.35E-24 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Pfam PF02929 Beta galactosidase small chain 757 1024 7.8E-57 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Gene3D G3DSA:2.60.40.320 628 730 6.7E-25 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 534 549 2.4E-36 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 147 162 2.4E-36 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 378 396 2.4E-36 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 347 361 2.4E-36 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 450 465 2.4E-36 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 Pfam PF16353 Domain of unknown function(DUF4981) 642 727 3.9E-16 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS14315 a6d033402fc57fc3e68ba72439224320 1029 SMART SM01038 752 1025 5.4E-100 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LK04_RS13150 8784adcba84afc4ad66d9a08f4e8c161 310 PANTHER PTHR18866 139 261 1.8E-38 T 22-04-2016 LK04_RS13150 8784adcba84afc4ad66d9a08f4e8c161 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 309 4.0E-121 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS13150 8784adcba84afc4ad66d9a08f4e8c161 310 Pfam PF02626 Allophanate hydrolase subunit 2 24 280 8.9E-93 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS13150 8784adcba84afc4ad66d9a08f4e8c161 310 SUPERFAMILY SSF50891 173 288 6.83E-11 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS13150 8784adcba84afc4ad66d9a08f4e8c161 310 SMART SM00797 23 299 3.2E-139 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 8.2E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 SUPERFAMILY SSF50447 455 552 4.94E-19 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 SMART SM00863 653 696 4.5E-22 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.5E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.5E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.5E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.5E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.5E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 PANTHER PTHR11777 1 875 0.0 T 22-04-2016 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 SUPERFAMILY SSF101353 256 464 9.29E-62 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 Pfam PF02272 DHHA1 domain 800 864 1.2E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 204.404 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 Gene3D G3DSA:3.30.930.10 4 251 4.1E-128 T 22-04-2016 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 PANTHER PTHR11777:SF9 1 875 0.0 T 22-04-2016 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 Gene3D G3DSA:3.30.980.10 672 686 1.6E-4 T 22-04-2016 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 Gene3D G3DSA:3.30.980.10 560 621 1.6E-4 T 22-04-2016 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 SUPERFAMILY SSF55186 552 708 1.44E-50 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 Pfam PF01411 tRNA synthetases class II (A) 7 556 6.4E-238 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 LK04_RS03580 2098cd3fc7b7e8252a075477427a0ea5 875 SUPERFAMILY SSF55681 4 255 1.74E-108 T 22-04-2016 LK04_RS16020 64524941de1456f630de17ec23e14089 264 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 241 261 1.3E-7 T 22-04-2016 IPR024726 Ferric iron reductase, C-terminal GO:0051537 LK04_RS16020 64524941de1456f630de17ec23e14089 264 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 88 262 9.6E-56 T 22-04-2016 IPR008090 Ferric iron reductase LK04_RS16020 64524941de1456f630de17ec23e14089 264 Pfam PF06276 Ferric iron reductase FhuF-like transporter 93 236 1.4E-21 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain LK04_RS16020 64524941de1456f630de17ec23e14089 264 PRINTS PR01714 Ferric iron reductase signature 197 212 8.1E-42 T 22-04-2016 IPR008090 Ferric iron reductase LK04_RS16020 64524941de1456f630de17ec23e14089 264 PRINTS PR01714 Ferric iron reductase signature 93 108 8.1E-42 T 22-04-2016 IPR008090 Ferric iron reductase LK04_RS16020 64524941de1456f630de17ec23e14089 264 PRINTS PR01714 Ferric iron reductase signature 241 259 8.1E-42 T 22-04-2016 IPR008090 Ferric iron reductase LK04_RS16020 64524941de1456f630de17ec23e14089 264 PRINTS PR01714 Ferric iron reductase signature 173 189 8.1E-42 T 22-04-2016 IPR008090 Ferric iron reductase LK04_RS16020 64524941de1456f630de17ec23e14089 264 PRINTS PR01714 Ferric iron reductase signature 56 73 8.1E-42 T 22-04-2016 IPR008090 Ferric iron reductase LK04_RS16020 64524941de1456f630de17ec23e14089 264 PRINTS PR01714 Ferric iron reductase signature 125 139 8.1E-42 T 22-04-2016 IPR008090 Ferric iron reductase LK04_RS16020 64524941de1456f630de17ec23e14089 264 PRINTS PR01714 Ferric iron reductase signature 215 231 8.1E-42 T 22-04-2016 IPR008090 Ferric iron reductase LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 Gene3D G3DSA:3.10.20.70 3 105 1.2E-39 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 SUPERFAMILY SSF55931 102 468 2.55E-137 T 22-04-2016 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.0E-214 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 PANTHER PTHR20852 1 138 6.7E-275 T 22-04-2016 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 PANTHER PTHR20852 160 469 6.7E-275 T 22-04-2016 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 SUPERFAMILY SSF54368 3 99 3.66E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 7.5E-137 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 PANTHER PTHR20852:SF15 1 138 6.7E-275 T 22-04-2016 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 PANTHER PTHR20852:SF15 160 469 6.7E-275 T 22-04-2016 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.4E-32 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 SMART SM01230 102 379 3.3E-149 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 Gene3D G3DSA:3.30.590.10 106 455 7.5E-139 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 LK04_RS19210 f5f73d48dca1bc709ed513b9c981035c 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 Gene3D G3DSA:3.20.20.120 124 397 1.3E-106 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 PANTHER PTHR13794:SF47 6 151 1.6E-247 T 22-04-2016 LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 PANTHER PTHR13794:SF47 172 430 1.6E-247 T 22-04-2016 LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 136 1.2E-6 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 PANTHER PTHR13794 6 151 1.6E-247 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 PANTHER PTHR13794 172 430 1.6E-247 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 Gene3D G3DSA:3.30.390.10 8 123 2.4E-16 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 SUPERFAMILY SSF54826 6 136 2.02E-30 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 Pfam PF13378 Enolase C-terminal domain-like 188 404 5.5E-40 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 111 136 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 SUPERFAMILY SSF51604 138 414 1.36E-85 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS03375 0b354dccfed7e60d3054823df17861ce 448 SMART SM00922 184 284 1.2E-19 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LK04_RS11590 a9f6eb536287dc200e03651e012289ff 115 SUPERFAMILY SSF54637 11 101 1.52E-15 T 22-04-2016 IPR029069 HotDog domain LK04_RS11590 a9f6eb536287dc200e03651e012289ff 115 Gene3D G3DSA:3.10.129.10 11 98 9.5E-15 T 22-04-2016 IPR029069 HotDog domain LK04_RS11590 a9f6eb536287dc200e03651e012289ff 115 PIRSF PIRSF030962 2 115 8.5E-42 T 22-04-2016 IPR016962 Dehydrase, ECs4332, predicted LK04_RS11590 a9f6eb536287dc200e03651e012289ff 115 Pfam PF07977 FabA-like domain 18 94 4.1E-7 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LK04_RS12810 940679bebf113557eb0e163c75537bc5 253 Gene3D G3DSA:3.60.10.10 6 251 4.1E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LK04_RS12810 940679bebf113557eb0e163c75537bc5 253 PANTHER PTHR15822:SF7 1 251 7.8E-97 T 22-04-2016 LK04_RS12810 940679bebf113557eb0e163c75537bc5 253 SUPERFAMILY SSF56219 8 251 1.31E-50 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LK04_RS12810 940679bebf113557eb0e163c75537bc5 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 14 244 3.6E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LK04_RS12810 940679bebf113557eb0e163c75537bc5 253 PANTHER PTHR15822 1 251 7.8E-97 T 22-04-2016 LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 Gene3D G3DSA:3.40.190.10 92 177 5.9E-11 T 22-04-2016 LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 Gene3D G3DSA:3.40.190.10 263 286 5.9E-11 T 22-04-2016 LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 SUPERFAMILY SSF46785 6 89 2.72E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 SUPERFAMILY SSF53850 89 286 2.17E-29 T 22-04-2016 LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 Pfam PF03466 LysR substrate binding domain 89 283 1.8E-24 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 Gene3D G3DSA:1.10.10.10 4 81 6.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 PANTHER PTHR30126:SF29 3 283 5.0E-97 T 22-04-2016 LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 PANTHER PTHR30126 3 283 5.0E-97 T 22-04-2016 LK04_RS13745 f99afe8a40f18fb688e897e8767c7f80 289 Gene3D G3DSA:3.40.190.10 178 242 9.7E-6 T 22-04-2016 LK04_RS07280 412f3b773831c85111b8049360a38e0a 704 PANTHER PTHR36153 8 672 1.0E-138 T 22-04-2016 LK04_RS07280 412f3b773831c85111b8049360a38e0a 704 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 670 1.1E-192 T 22-04-2016 IPR017731 Type VI secretion system, IcmF LK04_RS07280 412f3b773831c85111b8049360a38e0a 704 Pfam PF06761 Intracellular multiplication and human macrophage-killing 528 670 8.0E-30 T 22-04-2016 IPR009612 ImcF-related LK04_RS07280 412f3b773831c85111b8049360a38e0a 704 Pfam PF14331 ImcF-related N-terminal domain 204 476 1.6E-92 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain LK04_RS07280 412f3b773831c85111b8049360a38e0a 704 Gene3D G3DSA:3.40.50.300 139 308 1.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07280 412f3b773831c85111b8049360a38e0a 704 PANTHER PTHR36153:SF1 8 672 1.0E-138 T 22-04-2016 LK04_RS07280 412f3b773831c85111b8049360a38e0a 704 SUPERFAMILY SSF52540 124 284 3.03E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13410 ac62ff49778e63bf2513acf29c38ff7f 321 PANTHER PTHR10949 4 312 1.7E-182 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LK04_RS13410 ac62ff49778e63bf2513acf29c38ff7f 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.049 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LK04_RS13410 ac62ff49778e63bf2513acf29c38ff7f 321 Gene3D G3DSA:3.20.20.70 55 313 3.5E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS13410 ac62ff49778e63bf2513acf29c38ff7f 321 Pfam PF04055 Radical SAM superfamily 91 251 6.1E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS13410 ac62ff49778e63bf2513acf29c38ff7f 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 28 73 1.1E-6 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LK04_RS13410 ac62ff49778e63bf2513acf29c38ff7f 321 PIRSF PIRSF005963 1 320 1.2E-131 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LK04_RS13410 ac62ff49778e63bf2513acf29c38ff7f 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 2.1E-158 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LK04_RS13410 ac62ff49778e63bf2513acf29c38ff7f 321 SMART SM00729 84 293 5.9E-16 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LK04_RS13410 ac62ff49778e63bf2513acf29c38ff7f 321 SUPERFAMILY SSF102114 53 316 2.49E-67 T 22-04-2016 LK04_RS13485 204d1f1ea634241d5c6506a2d724b576 381 Gene3D G3DSA:3.40.50.1970 9 185 9.4E-39 T 22-04-2016 LK04_RS13485 204d1f1ea634241d5c6506a2d724b576 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 325 3.5E-75 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 LK04_RS13485 204d1f1ea634241d5c6506a2d724b576 381 SUPERFAMILY SSF56796 9 321 2.36E-68 T 22-04-2016 LK04_RS13485 204d1f1ea634241d5c6506a2d724b576 381 Gene3D G3DSA:1.20.1090.10 187 360 7.1E-29 T 22-04-2016 LK04_RS13485 204d1f1ea634241d5c6506a2d724b576 381 PANTHER PTHR11496 5 313 2.1E-63 T 22-04-2016 LK04_RS06590 36905c51eaa311875b9b01b171517709 308 PANTHER PTHR10996 15 304 4.9E-100 T 22-04-2016 LK04_RS06590 36905c51eaa311875b9b01b171517709 308 Gene3D G3DSA:3.40.50.720 49 105 6.5E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06590 36905c51eaa311875b9b01b171517709 308 SUPERFAMILY SSF52283 33 122 3.68E-9 T 22-04-2016 LK04_RS06590 36905c51eaa311875b9b01b171517709 308 SUPERFAMILY SSF51735 94 274 1.8E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06590 36905c51eaa311875b9b01b171517709 308 PANTHER PTHR10996:SF114 15 304 4.9E-100 T 22-04-2016 LK04_RS06590 36905c51eaa311875b9b01b171517709 308 Gene3D G3DSA:3.40.50.720 106 274 8.3E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06590 36905c51eaa311875b9b01b171517709 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 102 273 1.6E-44 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS16260 9dbd4ff1690f5f75ace82905be148c24 153 SUPERFAMILY SSF102400 1 143 8.37E-47 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 LK04_RS16260 9dbd4ff1690f5f75ace82905be148c24 153 Gene3D G3DSA:3.40.50.10110 1 143 1.2E-51 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 LK04_RS16260 9dbd4ff1690f5f75ace82905be148c24 153 PANTHER PTHR38767 2 149 8.5E-63 T 22-04-2016 LK04_RS16260 9dbd4ff1690f5f75ace82905be148c24 153 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 3.3E-38 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 PANTHER PTHR30575:SF0 1 398 5.0E-144 T 22-04-2016 LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 PANTHER PTHR30575 1 398 5.0E-144 T 22-04-2016 LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 PIRSF PIRSF037226 2 399 1.0E-156 T 22-04-2016 IPR017144 Peptidase M20A, amidohydrolase, predicted LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 Gene3D G3DSA:3.30.70.360 182 285 6.1E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 Pfam PF01546 Peptidase family M20/M25/M40 91 351 1.1E-9 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 SUPERFAMILY SSF55031 181 287 8.37E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 Pfam PF07687 Peptidase dimerisation domain 185 274 8.4E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 343 1.5E-65 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 Gene3D G3DSA:3.40.630.10 289 396 1.8E-58 T 22-04-2016 LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 Gene3D G3DSA:3.40.630.10 7 181 1.8E-58 T 22-04-2016 LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 SUPERFAMILY SSF53187 292 384 6.29E-56 T 22-04-2016 LK04_RS06490 ddabdb31a77e5c785ff9e43b8ddc15ca 399 SUPERFAMILY SSF53187 11 193 6.29E-56 T 22-04-2016 LK04_RS15570 3d72e89cc65d95dc46595d934dd748c8 160 PIRSF PIRSF000194 1 160 9.1E-58 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LK04_RS15570 3d72e89cc65d95dc46595d934dd748c8 160 Pfam PF00186 Dihydrofolate reductase 1 158 2.5E-58 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LK04_RS15570 3d72e89cc65d95dc46595d934dd748c8 160 PANTHER PTHR22778 1 160 2.4E-47 T 22-04-2016 LK04_RS15570 3d72e89cc65d95dc46595d934dd748c8 160 PANTHER PTHR22778:SF16 1 160 2.4E-47 T 22-04-2016 LK04_RS15570 3d72e89cc65d95dc46595d934dd748c8 160 PRINTS PR00070 Dihydrofolate reductase signature 13 23 1.2E-13 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LK04_RS15570 3d72e89cc65d95dc46595d934dd748c8 160 PRINTS PR00070 Dihydrofolate reductase signature 40 51 1.2E-13 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LK04_RS15570 3d72e89cc65d95dc46595d934dd748c8 160 PRINTS PR00070 Dihydrofolate reductase signature 27 35 1.2E-13 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LK04_RS15570 3d72e89cc65d95dc46595d934dd748c8 160 PRINTS PR00070 Dihydrofolate reductase signature 90 104 1.2E-13 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LK04_RS15570 3d72e89cc65d95dc46595d934dd748c8 160 SUPERFAMILY SSF53597 1 159 1.15E-55 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain LK04_RS15570 3d72e89cc65d95dc46595d934dd748c8 160 Gene3D G3DSA:3.40.430.10 1 159 2.4E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain LK04_RS08280 0e8060d5945174cbcf5d067160b92737 389 Gene3D G3DSA:1.25.40.10 39 314 5.8E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS08280 0e8060d5945174cbcf5d067160b92737 389 SUPERFAMILY SSF48452 103 272 1.18E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS08280 0e8060d5945174cbcf5d067160b92737 389 SMART SM00028 107 140 400.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS08280 0e8060d5945174cbcf5d067160b92737 389 SMART SM00028 214 247 0.026 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS08280 0e8060d5945174cbcf5d067160b92737 389 SMART SM00028 180 213 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS08280 0e8060d5945174cbcf5d067160b92737 389 SMART SM00028 69 102 56.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS08280 0e8060d5945174cbcf5d067160b92737 389 PANTHER PTHR23083 8 348 1.3E-41 T 22-04-2016 LK04_RS08280 0e8060d5945174cbcf5d067160b92737 389 Pfam PF13181 Tetratricopeptide repeat 215 245 0.057 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS08280 0e8060d5945174cbcf5d067160b92737 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.44 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 SUPERFAMILY SSF102114 127 374 3.92E-61 T 22-04-2016 LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 Gene3D G3DSA:3.80.30.20 146 380 7.6E-77 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 SMART SM00729 147 367 4.5E-59 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.4E-29 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 5.7E-206 T 22-04-2016 LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 PANTHER PTHR11918 1 474 7.8E-231 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 4.5E-152 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.255 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 Pfam PF01938 TRAM domain 378 440 3.5E-17 T 22-04-2016 IPR002792 TRAM domain LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 Pfam PF04055 Radical SAM superfamily 151 325 1.0E-26 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS13300 72ce94c4f4ab2fb93dd06a4a460f0c6c 474 PANTHER PTHR11918:SF43 1 474 7.8E-231 T 22-04-2016 LK04_RS17330 fd97b3fa78eb09e254384a42bd087b9f 70 Gene3D G3DSA:1.10.1470.10 1 67 1.2E-32 T 22-04-2016 IPR008462 CsbD-like LK04_RS17330 fd97b3fa78eb09e254384a42bd087b9f 70 Pfam PF05532 CsbD-like 4 55 4.5E-23 T 22-04-2016 IPR008462 CsbD-like LK04_RS17330 fd97b3fa78eb09e254384a42bd087b9f 70 SUPERFAMILY SSF69047 1 66 5.49E-27 T 22-04-2016 IPR008462 CsbD-like LK04_RS17330 fd97b3fa78eb09e254384a42bd087b9f 70 PANTHER PTHR34977 1 63 5.2E-18 T 22-04-2016 LK04_RS17330 fd97b3fa78eb09e254384a42bd087b9f 70 PIRSF PIRSF039008 1 66 3.4E-32 T 22-04-2016 IPR026042 Stress response protein YjbJ LK04_RS06040 fce1c9c065764ee8130dce57e4c65f36 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 34.832 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 LK04_RS06040 fce1c9c065764ee8130dce57e4c65f36 193 Pfam PF00692 dUTPase 79 187 1.2E-10 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 LK04_RS06040 fce1c9c065764ee8130dce57e4c65f36 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 5.4E-69 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 LK04_RS06040 fce1c9c065764ee8130dce57e4c65f36 193 SUPERFAMILY SSF51283 1 193 3.14E-60 T 22-04-2016 IPR029054 dUTPase-like LK04_RS06040 fce1c9c065764ee8130dce57e4c65f36 193 PANTHER PTHR11241:SF1 77 192 1.4E-67 T 22-04-2016 LK04_RS06040 fce1c9c065764ee8130dce57e4c65f36 193 PANTHER PTHR11241:SF1 1 58 1.4E-67 T 22-04-2016 LK04_RS06040 fce1c9c065764ee8130dce57e4c65f36 193 PANTHER PTHR11241 77 192 1.4E-67 T 22-04-2016 LK04_RS06040 fce1c9c065764ee8130dce57e4c65f36 193 PANTHER PTHR11241 1 58 1.4E-67 T 22-04-2016 LK04_RS06040 fce1c9c065764ee8130dce57e4c65f36 193 Gene3D G3DSA:2.70.40.10 1 192 2.4E-60 T 22-04-2016 IPR029054 dUTPase-like LK04_RS06675 6f38d88048ca77288de410d4a540c599 178 SMART SM00072 1 178 6.4E-17 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LK04_RS06675 6f38d88048ca77288de410d4a540c599 178 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 175 6.2E-63 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 LK04_RS06675 6f38d88048ca77288de410d4a540c599 178 SUPERFAMILY SSF52540 1 175 3.55E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06675 6f38d88048ca77288de410d4a540c599 178 PANTHER PTHR23117 1 175 2.4E-70 T 22-04-2016 LK04_RS06675 6f38d88048ca77288de410d4a540c599 178 PANTHER PTHR23117:SF8 1 175 2.4E-70 T 22-04-2016 LK04_RS06675 6f38d88048ca77288de410d4a540c599 178 Gene3D G3DSA:3.40.50.300 72 150 1.9E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06675 6f38d88048ca77288de410d4a540c599 178 Gene3D G3DSA:3.40.50.300 3 24 1.9E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06675 6f38d88048ca77288de410d4a540c599 178 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 175 35.143 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 LK04_RS06675 6f38d88048ca77288de410d4a540c599 178 Pfam PF00625 Guanylate kinase 2 176 1.5E-7 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LK04_RS13420 4d3c0ced04c527ad6399d0de9df29817 256 Pfam PF00005 ABC transporter 23 181 8.6E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS13420 4d3c0ced04c527ad6399d0de9df29817 256 Gene3D G3DSA:3.40.50.300 6 252 9.4E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13420 4d3c0ced04c527ad6399d0de9df29817 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS13420 4d3c0ced04c527ad6399d0de9df29817 256 PANTHER PTHR24220:SF447 9 254 3.0E-131 T 22-04-2016 LK04_RS13420 4d3c0ced04c527ad6399d0de9df29817 256 SUPERFAMILY SSF52540 7 251 9.63E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13420 4d3c0ced04c527ad6399d0de9df29817 256 PANTHER PTHR24220 9 254 3.0E-131 T 22-04-2016 LK04_RS13420 4d3c0ced04c527ad6399d0de9df29817 256 SMART SM00382 32 229 6.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS13420 4d3c0ced04c527ad6399d0de9df29817 256 PIRSF PIRSF039085 4 256 2.0E-117 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS11885 384b7f80483a9be90ac5789236f6e0d7 188 Gene3D G3DSA:3.40.50.10610 14 186 6.7E-18 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component LK04_RS11885 384b7f80483a9be90ac5789236f6e0d7 188 SUPERFAMILY SSF159594 23 186 3.92E-32 T 22-04-2016 LK04_RS11885 384b7f80483a9be90ac5789236f6e0d7 188 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 181 1.4E-41 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component LK04_RS06775 114266b2fffc6e68c516a7905f0692a3 427 Pfam PF11862 Domain of unknown function (DUF3382) 13 110 3.9E-19 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal LK04_RS06775 114266b2fffc6e68c516a7905f0692a3 427 Pfam PF02653 Branched-chain amino acid transport system / permease component 118 403 5.1E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS06775 114266b2fffc6e68c516a7905f0692a3 427 PANTHER PTHR30482 67 423 6.6E-174 T 22-04-2016 LK04_RS06775 114266b2fffc6e68c516a7905f0692a3 427 PANTHER PTHR30482:SF9 67 423 6.6E-174 T 22-04-2016 LK04_RS18730 9826a00e9c5b1cd3292f541181f415d3 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 43.943 T 22-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 LK04_RS18730 9826a00e9c5b1cd3292f541181f415d3 196 PANTHER PTHR23026:SF110 5 192 6.4E-85 T 22-04-2016 LK04_RS18730 9826a00e9c5b1cd3292f541181f415d3 196 SUPERFAMILY SSF55469 18 191 5.5E-44 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 LK04_RS18730 9826a00e9c5b1cd3292f541181f415d3 196 Pfam PF00881 Nitroreductase family 18 174 1.3E-15 T 22-04-2016 IPR029479 Nitroreductase LK04_RS18730 9826a00e9c5b1cd3292f541181f415d3 196 Gene3D G3DSA:3.40.109.10 9 194 3.4E-43 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 LK04_RS18730 9826a00e9c5b1cd3292f541181f415d3 196 PANTHER PTHR23026 5 192 6.4E-85 T 22-04-2016 LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 Gene3D G3DSA:3.30.450.20 112 218 1.7E-20 T 22-04-2016 LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 SUPERFAMILY SSF55073 243 397 3.14E-46 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 Gene3D G3DSA:3.30.70.270 239 403 7.7E-54 T 22-04-2016 LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 Pfam PF00563 EAL domain 412 644 2.5E-65 T 22-04-2016 IPR001633 EAL domain LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 115 233 2.8E-16 T 22-04-2016 IPR000014 PAS domain LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 390 2.2E-46 T 22-04-2016 IPR000160 GGDEF domain LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 PANTHER PTHR10799:SF710 268 505 3.8E-88 T 22-04-2016 LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 PANTHER PTHR10799:SF710 102 197 3.8E-88 T 22-04-2016 LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 SMART SM00052 405 649 1.5E-108 T 22-04-2016 IPR001633 EAL domain LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 Gene3D G3DSA:3.20.20.450 409 657 3.8E-88 T 22-04-2016 IPR001633 EAL domain LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 SMART SM00091 111 177 9.3E-6 T 22-04-2016 IPR000014 PAS domain LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 Pfam PF13426 PAS domain 123 225 5.4E-10 T 22-04-2016 IPR000014 PAS domain LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 SUPERFAMILY SSF141868 412 657 2.88E-81 T 22-04-2016 IPR001633 EAL domain LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 394 2.0E-35 T 22-04-2016 IPR000160 GGDEF domain LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 SUPERFAMILY SSF55785 124 234 4.54E-17 T 22-04-2016 IPR000014 PAS domain LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 PANTHER PTHR10799 268 505 3.8E-88 T 22-04-2016 LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 PANTHER PTHR10799 102 197 3.8E-88 T 22-04-2016 LK04_RS08315 a4c7ad24842f953a907563a014d775d9 661 SMART SM00267 226 395 1.5E-68 T 22-04-2016 IPR000160 GGDEF domain LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Gene3D G3DSA:2.40.50.140 619 694 2.4E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Gene3D G3DSA:3.30.230.70 314 542 7.5E-89 T 22-04-2016 IPR027408 PNPase/RNase PH domain LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Gene3D G3DSA:3.30.230.70 4 225 7.4E-82 T 22-04-2016 IPR027408 PNPase/RNase PH domain LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 4.2E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 2.0E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 SUPERFAMILY SSF55666 145 235 1.83E-30 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 SUPERFAMILY SSF54211 4 144 9.11E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 SUPERFAMILY SSF54211 293 488 3.09E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Gene3D G3DSA:1.10.10.400 226 313 1.4E-23 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 SMART SM00322 552 617 1.0E-11 T 22-04-2016 IPR004087 K Homology domain GO:0003676 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 SMART SM00316 620 690 3.0E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 PIRSF PIRSF005499 2 711 2.4E-298 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Gene3D G3DSA:3.30.1370.10 552 618 3.8E-25 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Pfam PF00013 KH domain 556 613 4.5E-9 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 SUPERFAMILY SSF55666 450 549 1.3E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 320 4.0E-23 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 PANTHER PTHR11252 2 691 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 SUPERFAMILY SSF50249 607 693 5.14E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 8.6E-6 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 4.8E-15 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 SUPERFAMILY SSF46915 239 320 5.49E-18 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.311 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 SUPERFAMILY SSF54791 554 622 4.25E-16 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 LK04_RS16380 2451ddcf8dbf752a886c1e10d764cd4b 711 Pfam PF00575 S1 RNA binding domain 619 690 3.4E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS16385 9cd7cc7461aa68c5aa14923894e7b4f1 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.9E-39 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 LK04_RS16385 9cd7cc7461aa68c5aa14923894e7b4f1 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16385 9cd7cc7461aa68c5aa14923894e7b4f1 89 SMART SM01387 8 88 3.7E-53 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16385 9cd7cc7461aa68c5aa14923894e7b4f1 89 Pfam PF00312 Ribosomal protein S15 8 88 3.7E-38 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16385 9cd7cc7461aa68c5aa14923894e7b4f1 89 Gene3D G3DSA:1.10.287.10 3 89 3.9E-39 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 LK04_RS16385 9cd7cc7461aa68c5aa14923894e7b4f1 89 PANTHER PTHR23321 1 89 3.6E-48 T 22-04-2016 LK04_RS16385 9cd7cc7461aa68c5aa14923894e7b4f1 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.283 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 LK04_RS16385 9cd7cc7461aa68c5aa14923894e7b4f1 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-36 T 22-04-2016 LK04_RS16385 9cd7cc7461aa68c5aa14923894e7b4f1 89 SUPERFAMILY SSF47060 3 89 5.89E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 SUPERFAMILY SSF56601 3 283 4.91E-75 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 SMART SM00936 283 374 5.0E-29 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 PANTHER PTHR21581 1 389 1.8E-207 T 22-04-2016 LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 SUPERFAMILY SSF69189 283 376 9.61E-24 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 PANTHER PTHR21581:SF5 1 389 1.8E-207 T 22-04-2016 LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 Gene3D G3DSA:3.40.710.10 31 283 1.4E-91 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 Gene3D G3DSA:2.60.410.10 284 374 2.5E-27 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 263 2.0E-88 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 4.4E-19 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 4.4E-19 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 4.4E-19 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS06320 c03cd31af5dbe7110dfc416fc6a65575 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 374 2.1E-22 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 SUPERFAMILY SSF57716 217 268 3.09E-18 T 22-04-2016 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.2E-25 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.3E-10 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 SMART SM01232 129 221 2.0E-48 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 9.5E-32 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 SUPERFAMILY SSF81624 2 138 3.27E-44 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 SMART SM00898 2 115 4.4E-55 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 Gene3D G3DSA:1.10.8.50 130 269 5.5E-52 T 22-04-2016 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.535 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 SUPERFAMILY SSF46946 130 222 1.28E-28 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 PANTHER PTHR22993 1 268 5.4E-137 T 22-04-2016 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 6.6E-102 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 Gene3D G3DSA:3.20.190.10 2 129 9.6E-39 T 22-04-2016 LK04_RS19395 caa0ecf2c444de96959d7d65c073c65b 269 PANTHER PTHR22993:SF15 1 268 5.4E-137 T 22-04-2016 LK04_RS02280 50773c74c2080fe26c55bc8162744499 625 PANTHER PTHR30627 1 611 2.8E-246 T 22-04-2016 LK04_RS02280 50773c74c2080fe26c55bc8162744499 625 Gene3D G3DSA:3.90.1310.10 125 248 1.0E-37 T 22-04-2016 LK04_RS02280 50773c74c2080fe26c55bc8162744499 625 SUPERFAMILY SSF56519 53 249 2.75E-51 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LK04_RS02280 50773c74c2080fe26c55bc8162744499 625 Gene3D G3DSA:3.40.710.10 249 610 4.9E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS02280 50773c74c2080fe26c55bc8162744499 625 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 15 610 1.1E-222 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 LK04_RS02280 50773c74c2080fe26c55bc8162744499 625 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 607 2.8E-68 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LK04_RS02280 50773c74c2080fe26c55bc8162744499 625 SUPERFAMILY SSF56601 250 610 8.21E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS02280 50773c74c2080fe26c55bc8162744499 625 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 235 3.6E-46 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LK04_RS02280 50773c74c2080fe26c55bc8162744499 625 PANTHER PTHR30627:SF2 1 611 2.8E-246 T 22-04-2016 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 Gene3D G3DSA:3.90.1440.10 230 368 2.2E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 PANTHER PTHR30612 550 901 0.0 T 22-04-2016 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 PANTHER PTHR30612 1 520 0.0 T 22-04-2016 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 SUPERFAMILY SSF52540 416 618 4.62E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 SMART SM00958 228 358 5.2E-83 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 PRINTS PR00906 SecA protein signature 376 393 2.1E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 PRINTS PR00906 SecA protein signature 117 127 2.1E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 PRINTS PR00906 SecA protein signature 339 361 2.1E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 PRINTS PR00906 SecA protein signature 101 115 2.1E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 PRINTS PR00906 SecA protein signature 63 87 2.1E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 PRINTS PR00906 SecA protein signature 413 426 2.1E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 PRINTS PR00906 SecA protein signature 170 190 2.1E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 SUPERFAMILY SSF81767 227 368 2.62E-43 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 4.5E-39 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 SUPERFAMILY SSF81886 620 840 2.62E-85 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 SUPERFAMILY SSF81886 877 889 2.62E-85 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 Gene3D G3DSA:3.40.50.300 417 619 7.2E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 Gene3D G3DSA:1.10.3060.10 648 831 1.4E-60 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 7.1E-70 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 Gene3D G3DSA:3.40.50.300 369 416 1.8E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 Gene3D G3DSA:3.40.50.300 2 228 1.8E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 SUPERFAMILY SSF52540 368 415 9.19E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 SUPERFAMILY SSF52540 5 228 9.19E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 SMART SM00957 6 402 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 Pfam PF02810 SEC-C motif 881 899 1.3E-10 T 22-04-2016 IPR004027 SEC-C motif LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 Pfam PF07517 SecA DEAD-like domain 7 402 3.7E-130 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 LK04_RS15365 a9115d764e4822d3d2fef6c1a22eec94 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.761 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LK04_RS02165 6fe49a9a767d171f71cd8121cf135921 160 Pfam PF10777 Inner membrane protein YlaC 1 152 1.9E-61 T 22-04-2016 IPR019713 Inner membrane protein YlaC LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 SUPERFAMILY SSF48452 27 283 7.36E-77 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 PANTHER PTHR23083 58 275 1.7E-29 T 22-04-2016 LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 PANTHER PTHR23083 31 38 1.7E-29 T 22-04-2016 LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.0045 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 SMART SM00028 96 129 2.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 SMART SM00028 62 95 0.0037 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 SMART SM00028 130 163 430.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 SMART SM00028 234 267 6.8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.2E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 PIRSF PIRSF004654 1 292 2.4E-118 T 22-04-2016 IPR023605 Lipoprotein NlpI LK04_RS16375 0cdcdf82a05aa3af49dc352a795390d5 294 Gene3D G3DSA:1.25.40.10 49 287 8.5E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS07985 45f086d9efa88a14beea99964ef09415 136 SUPERFAMILY SSF51316 9 134 3.49E-57 T 22-04-2016 IPR011057 Mss4-like LK04_RS07985 45f086d9efa88a14beea99964ef09415 136 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 135 1.6E-57 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LK04_RS07985 45f086d9efa88a14beea99964ef09415 136 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 129 37.284 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LK04_RS07985 45f086d9efa88a14beea99964ef09415 136 PANTHER PTHR10173 8 136 2.7E-60 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 LK04_RS07985 45f086d9efa88a14beea99964ef09415 136 PANTHER PTHR10173:SF18 8 136 2.7E-60 T 22-04-2016 LK04_RS07985 45f086d9efa88a14beea99964ef09415 136 Gene3D G3DSA:2.170.150.20 9 134 2.2E-58 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LK04_RS07985 45f086d9efa88a14beea99964ef09415 136 Pfam PF01641 SelR domain 12 127 1.5E-51 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LK04_RS11325 c88de3252b1827bc54f5ea739528d3e3 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 4.9E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 LK04_RS11325 c88de3252b1827bc54f5ea739528d3e3 56 Pfam PF01783 Ribosomal L32p protein family 2 55 5.3E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 LK04_RS11325 c88de3252b1827bc54f5ea739528d3e3 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.18 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 LK04_RS11325 c88de3252b1827bc54f5ea739528d3e3 56 SUPERFAMILY SSF57829 2 54 2.93E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 LK04_RS11325 c88de3252b1827bc54f5ea739528d3e3 56 PANTHER PTHR35534 1 56 6.4E-29 T 22-04-2016 LK04_RS15055 95fb1902615e0abdcf5090cbc93c4a53 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 3.2E-199 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 LK04_RS15055 95fb1902615e0abdcf5090cbc93c4a53 426 PANTHER PTHR11986:SF5 1 426 3.9E-237 T 22-04-2016 LK04_RS15055 95fb1902615e0abdcf5090cbc93c4a53 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS15055 95fb1902615e0abdcf5090cbc93c4a53 426 SUPERFAMILY SSF53383 2 425 4.22E-135 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS15055 95fb1902615e0abdcf5090cbc93c4a53 426 PANTHER PTHR11986 1 426 3.9E-237 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS15055 95fb1902615e0abdcf5090cbc93c4a53 426 Gene3D G3DSA:3.40.640.10 71 315 2.7E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS15055 95fb1902615e0abdcf5090cbc93c4a53 426 Gene3D G3DSA:3.90.1150.10 2 69 2.3E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS15055 95fb1902615e0abdcf5090cbc93c4a53 426 Gene3D G3DSA:3.90.1150.10 319 425 2.3E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS15055 95fb1902615e0abdcf5090cbc93c4a53 426 Pfam PF00202 Aminotransferase class-III 33 398 1.2E-75 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS15055 95fb1902615e0abdcf5090cbc93c4a53 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 106.296 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 Pfam PF07549 SecD/SecF GG Motif 105 129 3.0E-7 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 603 46.322 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 334 583 6.3E-85 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 SUPERFAMILY SSF82866 399 595 1.18E-40 T 22-04-2016 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 PANTHER PTHR30081 1 162 8.4E-224 T 22-04-2016 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 PANTHER PTHR30081 302 602 8.4E-224 T 22-04-2016 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 PANTHER PTHR30081 213 271 8.4E-224 T 22-04-2016 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 590 1.7E-152 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 PANTHER PTHR30081:SF1 1 162 8.4E-224 T 22-04-2016 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 PANTHER PTHR30081:SF1 302 602 8.4E-224 T 22-04-2016 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 PANTHER PTHR30081:SF1 213 271 8.4E-224 T 22-04-2016 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 Pfam PF02355 Protein export membrane protein 422 589 4.3E-16 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 Gene3D G3DSA:1.20.1640.10 424 594 8.8E-26 T 22-04-2016 LK04_RS14135 f8edb0172743aa2c5bbf0f1f67199cf0 604 Pfam PF13721 SecD export protein N-terminal TM region 1 92 3.0E-31 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 PANTHER PTHR11735:SF6 1 336 1.3E-171 T 22-04-2016 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 PANTHER PTHR11735 1 336 1.3E-171 T 22-04-2016 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 5.1E-129 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.568 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 Pfam PF00814 Glycoprotease family 24 307 3.0E-105 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 Gene3D G3DSA:3.30.420.40 1 159 3.3E-50 T 22-04-2016 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 SUPERFAMILY SSF53067 1 309 8.2E-45 T 22-04-2016 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 3.8E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.8E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 3.8E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 3.8E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 3.8E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 3.8E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01910 73647cbe47db8c70765b0c8b7be67718 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 2.9E-138 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 3.0E-176 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 SUPERFAMILY SSF52540 3 431 1.38E-179 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 SMART SM00788 4 425 1.7E-297 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 PANTHER PTHR11846 1 429 2.8E-260 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 Gene3D G3DSA:1.10.300.10 103 195 1.5E-35 T 22-04-2016 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 216.815 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 Gene3D G3DSA:3.90.170.10 267 426 3.1E-67 T 22-04-2016 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 4.4E-203 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 Gene3D G3DSA:3.40.440.10 3 94 1.1E-70 T 22-04-2016 LK04_RS01365 06ea3192f2574c5bf86b684d4c0a0d74 432 Gene3D G3DSA:3.40.440.10 196 266 1.1E-70 T 22-04-2016 LK04_RS08500 3b360e60b7581919124028e669de7426 199 Pfam PF02525 Flavodoxin-like fold 3 195 1.0E-45 T 22-04-2016 IPR003680 Flavodoxin-like fold LK04_RS08500 3b360e60b7581919124028e669de7426 199 PANTHER PTHR10204:SF16 1 199 1.3E-106 T 22-04-2016 LK04_RS08500 3b360e60b7581919124028e669de7426 199 SUPERFAMILY SSF52218 1 197 1.07E-59 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS08500 3b360e60b7581919124028e669de7426 199 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 197 31.188 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 LK04_RS08500 3b360e60b7581919124028e669de7426 199 Gene3D G3DSA:3.40.50.360 1 197 9.7E-65 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS08500 3b360e60b7581919124028e669de7426 199 PANTHER PTHR10204 1 199 1.3E-106 T 22-04-2016 LK04_RS00760 d8e89c5b6f77ed82f740b4fae2ada9e8 326 PANTHER PTHR30024:SF17 8 321 6.6E-112 T 22-04-2016 LK04_RS00760 d8e89c5b6f77ed82f740b4fae2ada9e8 326 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 249 5.9E-25 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LK04_RS00760 d8e89c5b6f77ed82f740b4fae2ada9e8 326 Gene3D G3DSA:3.40.190.10 217 250 9.2E-5 T 22-04-2016 LK04_RS00760 d8e89c5b6f77ed82f740b4fae2ada9e8 326 Gene3D G3DSA:3.40.190.10 68 103 9.2E-5 T 22-04-2016 LK04_RS00760 d8e89c5b6f77ed82f740b4fae2ada9e8 326 SUPERFAMILY SSF53850 36 307 8.49E-46 T 22-04-2016 LK04_RS00760 d8e89c5b6f77ed82f740b4fae2ada9e8 326 Gene3D G3DSA:3.40.190.10 108 216 5.5E-21 T 22-04-2016 LK04_RS00760 d8e89c5b6f77ed82f740b4fae2ada9e8 326 SMART SM00062 26 241 5.0E-25 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS00760 d8e89c5b6f77ed82f740b4fae2ada9e8 326 PANTHER PTHR30024 8 321 6.6E-112 T 22-04-2016 LK04_RS00760 d8e89c5b6f77ed82f740b4fae2ada9e8 326 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 27 321 7.1E-145 T 22-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 LK04_RS06015 b87a48d15d47ef485958a1419cd0d76f 446 PANTHER PTHR37944 1 446 2.2E-114 T 22-04-2016 LK04_RS06015 b87a48d15d47ef485958a1419cd0d76f 446 PANTHER PTHR37944:SF1 1 446 2.2E-114 T 22-04-2016 LK04_RS06015 b87a48d15d47ef485958a1419cd0d76f 446 Pfam PF04966 Carbohydrate-selective porin, OprB family 81 446 3.9E-86 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 LK04_RS12330 e2fef3de0229508e9af0fee228489f3f 377 Pfam PF07995 Glucose / Sorbosone dehydrogenase 33 365 3.5E-132 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 LK04_RS12330 e2fef3de0229508e9af0fee228489f3f 377 PANTHER PTHR19328 25 361 5.1E-83 T 22-04-2016 LK04_RS12330 e2fef3de0229508e9af0fee228489f3f 377 SUPERFAMILY SSF50952 23 367 9.15E-45 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 LK04_RS12330 e2fef3de0229508e9af0fee228489f3f 377 Gene3D G3DSA:2.120.10.30 12 374 1.3E-106 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 SMART SM00924 59 162 1.1E-23 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 Pfam PF00571 CBS domain 226 280 4.7E-7 T 22-04-2016 IPR000644 CBS domain LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 Pfam PF00571 CBS domain 162 218 6.3E-5 T 22-04-2016 IPR000644 CBS domain LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 SUPERFAMILY SSF161093 303 474 9.68E-49 T 22-04-2016 LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 TIGRFAM TIGR00400 mgtE: magnesium transporter 51 474 9.0E-76 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 PANTHER PTHR41394 59 474 6.6E-41 T 22-04-2016 LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 SUPERFAMILY SSF158791 50 153 1.96E-20 T 22-04-2016 LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 Pfam PF01769 Divalent cation transporter 346 468 1.5E-25 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 PANTHER PTHR41394:SF1 59 474 6.6E-41 T 22-04-2016 LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 Gene3D G3DSA:1.25.60.10 49 153 2.9E-19 T 22-04-2016 LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 Gene3D G3DSA:1.10.357.20 303 474 2.8E-54 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 Gene3D G3DSA:3.10.580.10 154 286 1.8E-19 T 22-04-2016 LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 SMART SM00116 233 281 0.0011 T 22-04-2016 IPR000644 CBS domain LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 SMART SM00116 169 222 6.8 T 22-04-2016 IPR000644 CBS domain LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 SUPERFAMILY SSF54631 161 301 1.42E-27 T 22-04-2016 LK04_RS04285 8b80f6f81ea8eda70e1676607edc96ed 477 Pfam PF03448 MgtE intracellular N domain 59 156 8.9E-20 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 PANTHER PTHR21371 1 489 4.2E-211 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 2.0E-25 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 358 482 1.6E-22 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 9.6E-129 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 SUPERFAMILY SSF51735 29 209 1.32E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 Gene3D G3DSA:1.10.1040.10 359 481 5.9E-16 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 Gene3D G3DSA:3.40.50.720 1 200 9.8E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 485 38.619 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 SUPERFAMILY SSF48179 349 484 6.63E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 SUPERFAMILY SSF48179 210 343 7.99E-39 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS19800 a0d05605cb55f916e919c27f37e4dba9 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 2.1E-57 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS00645 9e5d862d9243ad739303532a0952ca0b 343 Hamap MF_02021 Cell division protein DamX [damX]. 1 343 23.856 T 22-04-2016 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 LK04_RS00645 9e5d862d9243ad739303532a0952ca0b 343 Gene3D G3DSA:3.30.70.1070 259 322 6.9E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS00645 9e5d862d9243ad739303532a0952ca0b 343 SUPERFAMILY SSF110997 259 323 9.42E-6 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS00645 9e5d862d9243ad739303532a0952ca0b 343 Pfam PF05036 Sporulation related domain 260 333 2.6E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS12570 603b7ec74d8334c8b186be41badf7b8e 322 Gene3D G3DSA:1.20.970.10 7 70 5.7E-17 T 22-04-2016 LK04_RS12570 603b7ec74d8334c8b186be41badf7b8e 322 Gene3D G3DSA:3.40.1030.10 79 319 1.2E-36 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LK04_RS12570 603b7ec74d8334c8b186be41badf7b8e 322 SUPERFAMILY SSF52418 76 319 8.44E-43 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LK04_RS12570 603b7ec74d8334c8b186be41badf7b8e 322 SUPERFAMILY SSF47648 7 71 3.66E-13 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LK04_RS12570 603b7ec74d8334c8b186be41badf7b8e 322 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 68 4.5E-8 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 SUPERFAMILY SSF46785 3 86 1.88E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 Gene3D G3DSA:3.40.190.10 178 256 2.5E-23 T 22-04-2016 LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 PANTHER PTHR30537 1 286 1.2E-78 T 22-04-2016 LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 Gene3D G3DSA:1.10.10.10 6 87 2.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.1E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 SUPERFAMILY SSF53850 89 287 6.67E-31 T 22-04-2016 LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 Pfam PF03466 LysR substrate binding domain 89 286 3.0E-29 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 PANTHER PTHR30537:SF16 1 286 1.2E-78 T 22-04-2016 LK04_RS13790 a304adf6c614fe603890da05701e9b9b 289 Gene3D G3DSA:3.40.190.10 93 177 2.5E-23 T 22-04-2016 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 Gene3D G3DSA:1.10.287.730 148 172 1.7E-16 T 22-04-2016 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 PANTHER PTHR22807:SF30 32 428 1.1E-127 T 22-04-2016 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 Gene3D G3DSA:3.30.70.1170 173 229 8.6E-25 T 22-04-2016 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 SUPERFAMILY SSF53335 141 428 7.38E-77 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 428 2.2E-171 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 SUPERFAMILY SSF48013 6 149 7.68E-33 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 315 326 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 316 328 9.9E-32 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 427 9.9E-32 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 250 260 9.9E-32 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 366 382 9.9E-32 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 221 235 9.9E-32 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 Gene3D G3DSA:1.10.940.10 3 147 5.2E-42 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 Pfam PF01029 NusB family 6 127 1.9E-21 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 PANTHER PTHR22807 32 428 1.1E-127 T 22-04-2016 LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 Gene3D G3DSA:3.40.50.150 232 428 1.8E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS01030 f4a8338d5ea4be3f7c10b59abf991b10 428 Pfam PF01189 16S rRNA methyltransferase RsmB/F 239 425 1.0E-74 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 Pfam PF06723 MreB/Mbl protein 11 338 9.7E-150 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 PANTHER PTHR19375 9 336 3.1E-190 T 22-04-2016 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.7E-170 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 Gene3D G3DSA:3.30.420.40 164 190 2.1E-35 T 22-04-2016 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 Gene3D G3DSA:3.30.420.40 267 321 2.1E-35 T 22-04-2016 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 22-04-2016 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 PANTHER PTHR19375:SF117 9 336 3.1E-190 T 22-04-2016 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 Gene3D G3DSA:3.90.640.10 191 263 1.6E-29 T 22-04-2016 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 Gene3D G3DSA:3.30.420.40 9 163 1.8E-46 T 22-04-2016 LK04_RS01185 2dc8bc8e02d5ed34fb7ed3c9a4f3aa6e 347 SUPERFAMILY SSF53067 153 340 1.43E-49 T 22-04-2016 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 1.7E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 1.7E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 1.7E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 1.7E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.655 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 Gene3D G3DSA:1.10.10.60 27 98 1.7E-28 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 PIRSF PIRSF002097 1 98 4.0E-46 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.7E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 PANTHER PTHR32071 5 98 4.2E-34 T 22-04-2016 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS01130 5bbf7c517085efd4aae176630c5bb402 98 SUPERFAMILY SSF46689 4 98 6.87E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS07675 a63e8fcb43788e1c7de90d3c005da9a5 75 PANTHER PTHR38777:SF1 1 74 1.2E-18 T 22-04-2016 LK04_RS07675 a63e8fcb43788e1c7de90d3c005da9a5 75 SUPERFAMILY SSF57716 34 67 2.95E-6 T 22-04-2016 LK04_RS07675 a63e8fcb43788e1c7de90d3c005da9a5 75 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 65 1.2E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 LK04_RS07675 a63e8fcb43788e1c7de90d3c005da9a5 75 PANTHER PTHR38777 1 74 1.2E-18 T 22-04-2016 LK04_RS07675 a63e8fcb43788e1c7de90d3c005da9a5 75 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 6.4E-18 T 22-04-2016 IPR012783 Zinc finger, C4 DksA/TraR-type LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 PANTHER PTHR10133 1 249 1.9E-144 T 22-04-2016 LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 44.121 T 22-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 149 2.4E-29 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 Gene3D G3DSA:3.40.50.1010 4 174 6.6E-47 T 22-04-2016 IPR029060 PIN domain-like LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 Gene3D G3DSA:1.10.150.20 175 235 1.6E-23 T 22-04-2016 LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 PANTHER PTHR10133:SF39 1 249 1.9E-144 T 22-04-2016 LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 SUPERFAMILY SSF88723 4 159 2.2E-38 T 22-04-2016 IPR029060 PIN domain-like LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 SMART SM00475 3 250 1.1E-85 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 250 1.5E-23 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 SUPERFAMILY SSF47807 160 246 4.04E-22 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LK04_RS03325 8f7d63053fa586c61aa1e5f60b3bca90 251 SMART SM00279 162 197 5.5E-9 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 Pfam PF02556 Preprotein translocase subunit SecB 6 144 1.4E-57 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 4.9E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 4.9E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 4.9E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 4.9E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 PANTHER PTHR36918:SF1 7 154 2.2E-86 T 22-04-2016 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 PANTHER PTHR36918 7 154 2.2E-86 T 22-04-2016 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 Gene3D G3DSA:3.10.420.10 3 148 1.1E-62 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 7 145 5.0E-68 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 SUPERFAMILY SSF54611 3 141 6.1E-53 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LK04_RS19500 d71646bb7133414434df424f3b4f29e8 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.061 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 Gene3D G3DSA:3.40.1160.10 23 290 3.5E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 Pfam PF00696 Amino acid kinase family 25 267 8.5E-30 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 441 4.6E-200 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 SUPERFAMILY SSF55729 296 418 4.29E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 PIRSF PIRSF000423 1 441 3.6E-209 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 Gene3D G3DSA:3.40.630.30 293 439 2.7E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 236.92 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 Pfam PF00583 Acetyltransferase (GNAT) family 346 413 4.7E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 SUPERFAMILY SSF53633 4 290 9.08E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 PANTHER PTHR30602 1 441 0.0 T 22-04-2016 LK04_RS03260 02f11e78e5c428b56b1677c0094b3f2e 442 PANTHER PTHR30602:SF3 1 441 0.0 T 22-04-2016 LK04_RS08065 aea822f8ebbe28a49171e0a8d7c58ede 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 2.3E-112 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 LK04_RS08065 aea822f8ebbe28a49171e0a8d7c58ede 302 SUPERFAMILY SSF53448 9 293 3.38E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS08065 aea822f8ebbe28a49171e0a8d7c58ede 302 PANTHER PTHR22572 10 295 1.5E-148 T 22-04-2016 LK04_RS08065 aea822f8ebbe28a49171e0a8d7c58ede 302 PANTHER PTHR22572:SF118 10 295 1.5E-148 T 22-04-2016 LK04_RS08065 aea822f8ebbe28a49171e0a8d7c58ede 302 Gene3D G3DSA:3.90.550.10 9 281 7.8E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS08065 aea822f8ebbe28a49171e0a8d7c58ede 302 Pfam PF00483 Nucleotidyl transferase 10 275 4.6E-25 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 PRINTS PR00046 Major sigma-70 factor signature 404 417 6.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 PRINTS PR00046 Major sigma-70 factor signature 573 588 6.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 PRINTS PR00046 Major sigma-70 factor signature 552 564 6.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 PRINTS PR00046 Major sigma-70 factor signature 588 599 6.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 PRINTS PR00046 Major sigma-70 factor signature 428 436 6.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 Pfam PF04539 Sigma-70 region 3 459 534 3.5E-29 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 Pfam PF04545 Sigma-70, region 4 548 601 8.9E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 Pfam PF04546 Sigma-70, non-essential region 139 349 2.4E-76 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 Pfam PF04542 Sigma-70 region 2 380 449 1.7E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 Gene3D G3DSA:1.10.601.10 112 449 9.4E-139 T 22-04-2016 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 PANTHER PTHR30603:SF0 327 613 9.3E-254 T 22-04-2016 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 PANTHER PTHR30603:SF0 1 152 9.3E-254 T 22-04-2016 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 613 46.815 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 376 612 7.9E-121 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.4E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 PANTHER PTHR30603 327 613 9.3E-254 T 22-04-2016 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 PANTHER PTHR30603 1 152 9.3E-254 T 22-04-2016 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 573 599 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 SUPERFAMILY SSF88659 510 612 2.35E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 5.0E-31 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 SUPERFAMILY SSF88946 115 447 5.1E-104 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 Gene3D G3DSA:1.10.10.10 453 504 1.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 404 417 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 376 601 3.6E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 Gene3D G3DSA:1.10.10.10 544 613 1.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01895 7ba88c8af6f2def023dc0663d73f25f1 614 SUPERFAMILY SSF88659 453 526 8.78E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 SUPERFAMILY SSF52540 8 230 1.0E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 PANTHER PTHR24220 11 389 1.1E-143 T 22-04-2016 LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 Pfam PF00005 ABC transporter 277 434 1.1E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 Pfam PF00005 ABC transporter 25 174 6.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 Gene3D G3DSA:3.40.50.300 257 494 1.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 Gene3D G3DSA:3.40.50.300 5 230 7.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 PANTHER PTHR24220:SF308 11 389 1.1E-143 T 22-04-2016 LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 SMART SM00382 34 222 3.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 SMART SM00382 286 483 5.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS10610 c04264f54665efc6cd60adcc66966781 506 SUPERFAMILY SSF52540 249 489 5.62E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04175 342e7a5b9fd93f2895fe40cbc372f7e9 772 Pfam PF00905 Penicillin binding protein transpeptidase domain 302 556 9.2E-14 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LK04_RS04175 342e7a5b9fd93f2895fe40cbc372f7e9 772 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 685 769 5.4E-15 T 22-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 LK04_RS04175 342e7a5b9fd93f2895fe40cbc372f7e9 772 SUPERFAMILY SSF53955 38 258 7.31E-63 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS04175 342e7a5b9fd93f2895fe40cbc372f7e9 772 Gene3D G3DSA:3.40.710.10 229 614 2.7E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS04175 342e7a5b9fd93f2895fe40cbc372f7e9 772 Pfam PF00912 Transglycosylase 59 225 4.9E-49 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LK04_RS04175 342e7a5b9fd93f2895fe40cbc372f7e9 772 SUPERFAMILY SSF56601 207 636 4.28E-89 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS04175 342e7a5b9fd93f2895fe40cbc372f7e9 772 PANTHER PTHR32282:SF0 13 674 1.4E-193 T 22-04-2016 LK04_RS04175 342e7a5b9fd93f2895fe40cbc372f7e9 772 Gene3D G3DSA:1.10.3810.10 57 228 3.9E-50 T 22-04-2016 LK04_RS04175 342e7a5b9fd93f2895fe40cbc372f7e9 772 PANTHER PTHR32282 13 674 1.4E-193 T 22-04-2016 LK04_RS04175 342e7a5b9fd93f2895fe40cbc372f7e9 772 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 36 769 1.4E-241 T 22-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 Gene3D G3DSA:1.25.40.10 609 672 1.7E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 Gene3D G3DSA:1.25.40.10 274 339 4.7E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 PANTHER PTHR23083 271 334 1.3E-18 T 22-04-2016 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 PANTHER PTHR23083 31 98 1.3E-18 T 22-04-2016 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 PANTHER PTHR23083 471 507 1.3E-18 T 22-04-2016 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 PANTHER PTHR23083 616 663 1.3E-18 T 22-04-2016 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 PANTHER PTHR23083 383 428 1.3E-18 T 22-04-2016 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 SUPERFAMILY SSF48452 272 435 6.07E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 SMART SM00028 272 305 89.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 SMART SM00028 306 339 70.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 SMART SM00028 464 497 26.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 SMART SM00028 354 387 270.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 SMART SM00028 388 421 0.018 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 Pfam PF14559 Tetratricopeptide repeat 616 670 4.3E-9 T 22-04-2016 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 Gene3D G3DSA:1.25.40.10 54 141 3.8E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 SUPERFAMILY SSF56925 1012 1113 1.7E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 SUPERFAMILY SSF48452 361 664 1.9E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 SUPERFAMILY SSF48452 167 212 5.69E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 SUPERFAMILY SSF48452 44 101 5.69E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 Pfam PF13432 Tetratricopeptide repeat 277 337 2.4E-5 T 22-04-2016 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 802 1134 4.0E-123 T 22-04-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 UniPathway: UPA00694 LK04_RS18290 ab97503a6990438b965005fdc42cdefe 1155 Gene3D G3DSA:1.25.40.10 355 557 7.6E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS03025 1b537fe351a654a33cfa2e40a5c2061e 172 SUPERFAMILY SSF52218 1 167 7.3E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS03025 1b537fe351a654a33cfa2e40a5c2061e 172 Gene3D G3DSA:3.40.50.360 1 167 6.6E-55 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS03025 1b537fe351a654a33cfa2e40a5c2061e 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 LK04_RS03025 1b537fe351a654a33cfa2e40a5c2061e 172 PIRSF PIRSF038996 1 171 6.4E-54 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 LK04_RS03025 1b537fe351a654a33cfa2e40a5c2061e 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 167 1.5E-66 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 LK04_RS03025 1b537fe351a654a33cfa2e40a5c2061e 172 PANTHER PTHR19384:SF73 1 119 1.4E-76 T 22-04-2016 LK04_RS03025 1b537fe351a654a33cfa2e40a5c2061e 172 PANTHER PTHR19384:SF73 141 169 1.4E-76 T 22-04-2016 LK04_RS03025 1b537fe351a654a33cfa2e40a5c2061e 172 Pfam PF00258 Flavodoxin 5 160 3.7E-26 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LK04_RS03025 1b537fe351a654a33cfa2e40a5c2061e 172 PANTHER PTHR19384 1 119 1.4E-76 T 22-04-2016 LK04_RS03025 1b537fe351a654a33cfa2e40a5c2061e 172 PANTHER PTHR19384 141 169 1.4E-76 T 22-04-2016 LK04_RS15155 8b3c1c9c8ffc91b273b2a9547ac72b8b 430 PANTHER PTHR11808 14 429 7.1E-168 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS15155 8b3c1c9c8ffc91b273b2a9547ac72b8b 430 SUPERFAMILY SSF53383 68 426 6.05E-85 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS15155 8b3c1c9c8ffc91b273b2a9547ac72b8b 430 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 19 425 6.1E-101 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS15155 8b3c1c9c8ffc91b273b2a9547ac72b8b 430 PANTHER PTHR11808:SF49 14 429 7.1E-168 T 22-04-2016 LK04_RS15155 8b3c1c9c8ffc91b273b2a9547ac72b8b 430 Gene3D G3DSA:3.40.640.10 17 289 1.7E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS15155 8b3c1c9c8ffc91b273b2a9547ac72b8b 430 Gene3D G3DSA:3.90.1150.10 290 426 1.1E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS15155 8b3c1c9c8ffc91b273b2a9547ac72b8b 430 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 233 247 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS15155 8b3c1c9c8ffc91b273b2a9547ac72b8b 430 PIRSF PIRSF001434 4 428 6.1E-120 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS11635 7e969acfb360c405837824ee65e65d0e 362 SUPERFAMILY SSF111369 192 352 1.02E-12 T 22-04-2016 LK04_RS11635 7e969acfb360c405837824ee65e65d0e 362 PANTHER PTHR30386 9 357 1.3E-86 T 22-04-2016 LK04_RS11635 7e969acfb360c405837824ee65e65d0e 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 305 8.6E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS11635 7e969acfb360c405837824ee65e65d0e 362 SUPERFAMILY SSF111369 63 141 2.75E-10 T 22-04-2016 LK04_RS11635 7e969acfb360c405837824ee65e65d0e 362 Gene3D G3DSA:2.40.50.100 226 260 1.8E-16 T 22-04-2016 LK04_RS11635 7e969acfb360c405837824ee65e65d0e 362 Gene3D G3DSA:2.40.50.100 65 95 1.8E-16 T 22-04-2016 LK04_RS11635 7e969acfb360c405837824ee65e65d0e 362 PANTHER PTHR30386:SF0 9 357 1.3E-86 T 22-04-2016 LK04_RS11635 7e969acfb360c405837824ee65e65d0e 362 Pfam PF00529 HlyD membrane-fusion protein of T1SS 42 348 4.2E-9 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 6.3E-71 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 PANTHER PTHR32248 1 477 1.8E-185 T 22-04-2016 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 1.1E-14 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 PANTHER PTHR32248:SF4 1 477 1.8E-185 T 22-04-2016 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 PRINTS PR00045 Sigma-54 factor signature 392 403 8.0E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 PRINTS PR00045 Sigma-54 factor signature 376 388 8.0E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 PRINTS PR00045 Sigma-54 factor signature 186 203 8.0E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 PRINTS PR00045 Sigma-54 factor signature 450 468 8.0E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 PIRSF PIRSF000774 1 477 3.4E-152 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 3.4E-61 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 474 3.4E-160 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS16630 69703ed4f51c2d76750bc4c53f178b18 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 Gene3D G3DSA:1.10.287.950 283 487 3.3E-60 T 22-04-2016 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 SMART SM00304 215 267 1.6E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 SUPERFAMILY SSF58104 235 516 2.88E-72 T 22-04-2016 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 514 8.8E-60 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 Pfam PF00672 HAMP domain 196 263 7.6E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 SUPERFAMILY SSF47170 26 177 3.14E-8 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 SMART SM00283 268 515 4.4E-91 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 PANTHER PTHR32089:SF63 144 518 1.9E-139 T 22-04-2016 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 53 68 3.4E-62 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 3.4E-62 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 3.4E-62 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 3.4E-62 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 3.4E-62 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 3.4E-62 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 3.4E-62 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 Pfam PF02203 Tar ligand binding domain homologue 2 168 1.1E-14 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS01495 c02573fe06428d3cfe5e77fe844f7516 519 PANTHER PTHR32089 144 518 1.9E-139 T 22-04-2016 LK04_RS10540 35dbcf91fe15f5ca9cf173d4bed6f50b 275 Pfam PF02540 NAD synthase 23 265 7.1E-73 T 22-04-2016 IPR022310 NAD/GMP synthase LK04_RS10540 35dbcf91fe15f5ca9cf173d4bed6f50b 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 30.741 T 22-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 LK04_RS10540 35dbcf91fe15f5ca9cf173d4bed6f50b 275 SUPERFAMILY SSF52402 3 273 2.32E-83 T 22-04-2016 LK04_RS10540 35dbcf91fe15f5ca9cf173d4bed6f50b 275 PANTHER PTHR23090:SF7 1 274 2.9E-157 T 22-04-2016 LK04_RS10540 35dbcf91fe15f5ca9cf173d4bed6f50b 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 18 275 3.4E-77 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 LK04_RS10540 35dbcf91fe15f5ca9cf173d4bed6f50b 275 Gene3D G3DSA:3.40.50.620 4 269 2.6E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS10540 35dbcf91fe15f5ca9cf173d4bed6f50b 275 PANTHER PTHR23090 1 274 2.9E-157 T 22-04-2016 LK04_RS19265 5865b4afbf37dba28f7a27d4776d7876 231 PANTHER PTHR12029 1 189 9.0E-71 T 22-04-2016 LK04_RS19265 5865b4afbf37dba28f7a27d4776d7876 231 PANTHER PTHR12029:SF45 1 189 9.0E-71 T 22-04-2016 LK04_RS19265 5865b4afbf37dba28f7a27d4776d7876 231 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 2.8E-24 T 22-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 LK04_RS19265 5865b4afbf37dba28f7a27d4776d7876 231 SUPERFAMILY SSF75217 5 184 1.77E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LK04_RS19265 5865b4afbf37dba28f7a27d4776d7876 231 Gene3D G3DSA:3.40.1280.10 2 175 5.2E-49 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LK04_RS19265 5865b4afbf37dba28f7a27d4776d7876 231 Pfam PF00588 SpoU rRNA Methylase family 20 159 2.6E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LK04_RS18785 451cd6edc9a48f56d600962381549d85 308 PANTHER PTHR12128 4 275 1.7E-39 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS18785 451cd6edc9a48f56d600962381549d85 308 SMART SM01130 4 289 1.5E-30 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS18785 451cd6edc9a48f56d600962381549d85 308 Gene3D G3DSA:3.20.20.70 1 275 3.0E-52 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS18785 451cd6edc9a48f56d600962381549d85 308 PIRSF PIRSF001365 1 281 1.8E-50 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS18785 451cd6edc9a48f56d600962381549d85 308 SUPERFAMILY SSF51569 1 275 3.14E-48 T 22-04-2016 LK04_RS18785 451cd6edc9a48f56d600962381549d85 308 Pfam PF00701 Dihydrodipicolinate synthetase family 5 275 1.7E-28 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS18785 451cd6edc9a48f56d600962381549d85 308 PANTHER PTHR12128:SF15 4 275 1.7E-39 T 22-04-2016 LK04_RS14390 0fec083e5099a2f1054034fa0fb0ea9a 396 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.476 T 22-04-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 LK04_RS14390 0fec083e5099a2f1054034fa0fb0ea9a 396 SUPERFAMILY SSF51395 223 375 2.56E-100 T 22-04-2016 LK04_RS14390 0fec083e5099a2f1054034fa0fb0ea9a 396 SUPERFAMILY SSF51395 6 193 2.56E-100 T 22-04-2016 LK04_RS14390 0fec083e5099a2f1054034fa0fb0ea9a 396 Pfam PF01070 FMN-dependent dehydrogenase 13 375 2.5E-124 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 LK04_RS14390 0fec083e5099a2f1054034fa0fb0ea9a 396 PANTHER PTHR10578 7 380 3.0E-164 T 22-04-2016 LK04_RS14390 0fec083e5099a2f1054034fa0fb0ea9a 396 PANTHER PTHR10578:SF65 7 380 3.0E-164 T 22-04-2016 LK04_RS14390 0fec083e5099a2f1054034fa0fb0ea9a 396 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 22-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 LK04_RS14390 0fec083e5099a2f1054034fa0fb0ea9a 396 Gene3D G3DSA:3.20.20.70 6 377 2.6E-134 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS14390 0fec083e5099a2f1054034fa0fb0ea9a 396 PIRSF PIRSF000138 2 380 1.6E-120 T 22-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 LK04_RS15195 72d2c96eb3e7e4fe147a585e3c0ceccc 382 SUPERFAMILY SSF56796 5 375 2.49E-98 T 22-04-2016 LK04_RS15195 72d2c96eb3e7e4fe147a585e3c0ceccc 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 6 369 1.4E-99 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 LK04_RS15195 72d2c96eb3e7e4fe147a585e3c0ceccc 382 Gene3D G3DSA:1.20.1090.10 178 375 1.6E-57 T 22-04-2016 LK04_RS15195 72d2c96eb3e7e4fe147a585e3c0ceccc 382 Gene3D G3DSA:3.40.50.1970 2 177 6.0E-41 T 22-04-2016 LK04_RS15195 72d2c96eb3e7e4fe147a585e3c0ceccc 382 PANTHER PTHR11496 1 382 2.5E-94 T 22-04-2016 LK04_RS18830 011941b4f0193b94f4bea7d1d8b22887 420 SUPERFAMILY SSF82171 280 416 4.32E-16 T 22-04-2016 LK04_RS18830 011941b4f0193b94f4bea7d1d8b22887 420 SUPERFAMILY SSF82171 20 253 4.32E-16 T 22-04-2016 LK04_RS18830 011941b4f0193b94f4bea7d1d8b22887 420 Pfam PF07676 WD40-like Beta Propeller Repeat 389 406 0.018 T 22-04-2016 IPR011659 WD40-like Beta Propeller LK04_RS18830 011941b4f0193b94f4bea7d1d8b22887 420 Gene3D G3DSA:2.120.10.30 7 62 4.8E-28 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LK04_RS18830 011941b4f0193b94f4bea7d1d8b22887 420 Gene3D G3DSA:2.120.10.30 126 149 4.8E-28 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LK04_RS18830 011941b4f0193b94f4bea7d1d8b22887 420 Gene3D G3DSA:2.120.10.30 183 408 4.8E-28 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LK04_RS18830 011941b4f0193b94f4bea7d1d8b22887 420 Pfam PF12566 Protein of unknown function (DUF3748) 65 182 1.4E-55 T 22-04-2016 IPR022223 Protein of unknown function DUF3748 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 PRINTS PR00171 Sugar transporter signature 27 37 6.8E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 PRINTS PR00171 Sugar transporter signature 353 374 6.8E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 PRINTS PR00171 Sugar transporter signature 376 388 6.8E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 PRINTS PR00171 Sugar transporter signature 110 129 6.8E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 PRINTS PR00171 Sugar transporter signature 263 273 6.8E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 Gene3D G3DSA:1.20.1250.20 21 202 5.0E-33 T 22-04-2016 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 Gene3D G3DSA:1.20.1250.20 250 449 8.0E-25 T 22-04-2016 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 448 2.3E-147 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 SUPERFAMILY SSF103473 12 449 1.44E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 324 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 PANTHER PTHR23500 15 461 4.9E-231 T 22-04-2016 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 Pfam PF00083 Sugar (and other) transporter 19 451 2.5E-138 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS02755 91e2c6601b01e303e70540d2d13e34cd 464 PANTHER PTHR23500:SF119 15 461 4.9E-231 T 22-04-2016 LK04_RS05495 3708d7e57fc6ab88b481476bdba441bd 226 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 150 166 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 LK04_RS05495 3708d7e57fc6ab88b481476bdba441bd 226 PANTHER PTHR11995 2 222 6.0E-137 T 22-04-2016 LK04_RS05495 3708d7e57fc6ab88b481476bdba441bd 226 PANTHER PTHR11995:SF14 2 222 6.0E-137 T 22-04-2016 LK04_RS05495 3708d7e57fc6ab88b481476bdba441bd 226 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 29 183 41.591 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 LK04_RS05495 3708d7e57fc6ab88b481476bdba441bd 226 Gene3D G3DSA:3.40.50.700 53 180 2.7E-30 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 LK04_RS05495 3708d7e57fc6ab88b481476bdba441bd 226 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 70 176 4.6E-21 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 LK04_RS05495 3708d7e57fc6ab88b481476bdba441bd 226 SUPERFAMILY SSF56770 45 191 8.5E-63 T 22-04-2016 LK04_RS05495 3708d7e57fc6ab88b481476bdba441bd 226 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 48 184 5.0E-68 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 PRINTS PR00969 Pili chaperone signature 26 35 1.3E-25 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 PRINTS PR00969 Pili chaperone signature 170 185 1.3E-25 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 PRINTS PR00969 Pili chaperone signature 107 124 1.3E-25 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 PRINTS PR00969 Pili chaperone signature 130 145 1.3E-25 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 Gene3D G3DSA:2.60.40.1070 159 248 2.4E-26 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 SUPERFAMILY SSF49584 160 249 1.18E-22 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 Gene3D G3DSA:2.60.40.360 26 149 1.5E-42 T 22-04-2016 IPR008962 PapD-like LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 SUPERFAMILY SSF49354 21 148 8.11E-36 T 22-04-2016 IPR008962 PapD-like LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 PANTHER PTHR30251 21 245 1.4E-103 T 22-04-2016 LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 PANTHER PTHR30251:SF6 21 245 1.4E-103 T 22-04-2016 LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 236 1.3E-15 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 106 123 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site LK04_RS02375 ec150373de7d464262eec818bf9cdae5 258 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 148 1.1E-37 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 Gene3D G3DSA:3.30.2060.10 130 205 3.1E-14 T 22-04-2016 LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 Pfam PF02559 CarD-like/TRCF domain 477 572 3.7E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 SUPERFAMILY SSF52540 8 342 2.26E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 Pfam PF00270 DEAD/DEAH box helicase 602 762 1.4E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 Gene3D G3DSA:3.40.50.300 795 960 5.8E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 SMART SM01058 476 573 1.1E-50 T 22-04-2016 IPR003711 CarD-like/TRCF domain LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 Pfam PF00271 Helicase conserved C-terminal domain 803 906 5.9E-18 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 SMART SM00982 1005 1105 2.9E-48 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 SUPERFAMILY SSF52540 520 780 1.03E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 PANTHER PTHR14025:SF21 383 1142 0.0 T 22-04-2016 LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 SUPERFAMILY SSF143517 992 1144 9.42E-43 T 22-04-2016 LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 SMART SM00490 823 907 2.3E-18 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 SUPERFAMILY SSF52540 351 463 6.64E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 SUPERFAMILY SSF141259 468 545 8.11E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 PANTHER PTHR14025 383 1142 0.0 T 22-04-2016 LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 Pfam PF03461 TRCF domain 1006 1097 5.4E-28 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 SMART SM00487 597 787 2.5E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 26 1125 28.748 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 SUPERFAMILY SSF52540 779 987 6.33E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11210 a064681c6524a97ab7f04b8da4ede740 1147 Gene3D G3DSA:3.40.50.300 587 783 4.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11925 38a0620e095393f3b6f8074490d08dcb 329 PANTHER PTHR22916 1 224 6.2E-35 T 22-04-2016 LK04_RS11925 38a0620e095393f3b6f8074490d08dcb 329 Gene3D G3DSA:3.90.550.10 6 207 6.7E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS11925 38a0620e095393f3b6f8074490d08dcb 329 SUPERFAMILY SSF53448 7 231 3.94E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS11925 38a0620e095393f3b6f8074490d08dcb 329 PANTHER PTHR22916:SF24 1 224 6.2E-35 T 22-04-2016 LK04_RS11925 38a0620e095393f3b6f8074490d08dcb 329 Pfam PF00535 Glycosyl transferase family 2 7 98 5.1E-25 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 Gene3D G3DSA:3.40.50.740 320 470 1.8E-58 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 8.3E-17 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 Gene3D G3DSA:3.40.228.10 152 261 3.1E-70 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 Gene3D G3DSA:3.40.228.10 1 108 3.1E-70 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615 397 481 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615 1 182 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615 286 380 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615 573 646 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615 667 803 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615 210 247 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 22-04-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 SUPERFAMILY SSF50692 674 803 1.12E-43 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 SUPERFAMILY SSF50692 617 647 1.12E-43 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 Gene3D G3DSA:2.40.40.20 606 803 3.6E-49 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 Pfam PF00384 Molybdopterin oxidoreductase 2 377 4.0E-20 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 SUPERFAMILY SSF53706 1 638 5.5E-231 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615:SF149 397 481 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615:SF149 1 182 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615:SF149 286 380 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615:SF149 573 646 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615:SF149 667 803 0.0 T 22-04-2016 LK04_RS18520 bb6b510cf0f7d08d3283218aa92db96d 803 PANTHER PTHR11615:SF149 210 247 0.0 T 22-04-2016 LK04_RS17930 988d72c7e1933a80e91d9b849e11fc28 253 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 2.0E-77 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LK04_RS17930 988d72c7e1933a80e91d9b849e11fc28 253 PANTHER PTHR30371:SF0 4 253 2.2E-116 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LK04_RS17930 988d72c7e1933a80e91d9b849e11fc28 253 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 242 17.959 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LK04_RS17930 988d72c7e1933a80e91d9b849e11fc28 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.5E-49 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LK04_RS17930 988d72c7e1933a80e91d9b849e11fc28 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.5E-49 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LK04_RS17930 988d72c7e1933a80e91d9b849e11fc28 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.5E-49 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LK04_RS17930 988d72c7e1933a80e91d9b849e11fc28 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.5E-49 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LK04_RS17930 988d72c7e1933a80e91d9b849e11fc28 253 ProSitePatterns PS01218 TatC family signature. 154 173 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site LK04_RS17930 988d72c7e1933a80e91d9b849e11fc28 253 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 1.2E-65 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LK04_RS17930 988d72c7e1933a80e91d9b849e11fc28 253 PANTHER PTHR30371 4 253 2.2E-116 T 22-04-2016 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 SMART SM00342 187 269 2.0E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 SUPERFAMILY SSF46689 224 272 3.0E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 PANTHER PTHR11019 24 272 1.5E-52 T 22-04-2016 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 Pfam PF02311 AraC-like ligand binding domain 24 152 7.5E-24 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 Pfam PF12833 Helix-turn-helix domain 193 270 9.7E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 Gene3D G3DSA:1.10.10.60 225 271 1.8E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 PANTHER PTHR11019:SF75 24 272 1.5E-52 T 22-04-2016 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 SUPERFAMILY SSF51215 32 155 1.44E-20 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 SUPERFAMILY SSF46689 171 220 4.03E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 Gene3D G3DSA:1.10.10.60 167 224 1.2E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17255 90d1487cc6c5a6ceac7e3cc2c567d5b0 276 Gene3D G3DSA:2.60.120.280 34 155 9.8E-16 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 SUPERFAMILY SSF56436 200 456 2.12E-52 T 22-04-2016 IPR016187 C-type lectin fold LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 Pfam PF03781 Sulfatase-modifying factor enzyme 1 201 454 1.5E-28 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 Pfam PF12867 DinB superfamily 31 166 7.3E-10 T 22-04-2016 IPR024775 DinB-like domain LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 Gene3D G3DSA:3.90.1580.10 193 459 9.7E-50 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 PANTHER PTHR23150:SF24 1 491 5.1E-185 T 22-04-2016 LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 SUPERFAMILY SSF53335 577 669 1.96E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 SUPERFAMILY SSF53335 465 548 1.96E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 PANTHER PTHR23150 1 491 5.1E-185 T 22-04-2016 LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 Pfam PF08241 Methyltransferase domain 510 634 5.6E-12 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 12 454 4.3E-207 T 22-04-2016 IPR027577 5-histidylcysteine sulfoxide synthase LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 467 707 7.5E-98 T 22-04-2016 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 Gene3D G3DSA:3.40.50.150 579 673 1.6E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS19065 bf1d4a719928366a3e9b9fb43675c022 708 Gene3D G3DSA:3.40.50.150 473 545 1.6E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS18040 0c91123dff3a7e766697ec0be0fd9c30 299 PANTHER PTHR22911 1 295 7.9E-146 T 22-04-2016 LK04_RS18040 0c91123dff3a7e766697ec0be0fd9c30 299 TIGRFAM TIGR00688 rarD: protein RarD 9 261 6.8E-96 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 LK04_RS18040 0c91123dff3a7e766697ec0be0fd9c30 299 PANTHER PTHR22911:SF41 1 295 7.9E-146 T 22-04-2016 LK04_RS18040 0c91123dff3a7e766697ec0be0fd9c30 299 SUPERFAMILY SSF103481 42 146 5.89E-13 T 22-04-2016 LK04_RS18040 0c91123dff3a7e766697ec0be0fd9c30 299 Pfam PF00892 EamA-like transporter family 9 142 6.4E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS18040 0c91123dff3a7e766697ec0be0fd9c30 299 Pfam PF00892 EamA-like transporter family 152 283 9.2E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS18040 0c91123dff3a7e766697ec0be0fd9c30 299 SUPERFAMILY SSF103481 186 284 3.14E-8 T 22-04-2016 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 4.0E-80 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 PANTHER PTHR30295:SF9 1 160 1.3E-49 T 22-04-2016 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 SUPERFAMILY SSF47240 1 156 2.02E-52 T 22-04-2016 IPR009078 Ferritin-like superfamily LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 Gene3D G3DSA:1.20.1260.10 1 157 1.2E-63 T 22-04-2016 IPR012347 Ferritin-related LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 PIRSF PIRSF002560 1 157 8.1E-70 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 PRINTS PR00601 Bacterioferritin signature 44 64 4.7E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 PRINTS PR00601 Bacterioferritin signature 107 127 4.7E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 PRINTS PR00601 Bacterioferritin signature 86 106 4.7E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 PRINTS PR00601 Bacterioferritin signature 23 43 4.7E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 PRINTS PR00601 Bacterioferritin signature 128 149 4.7E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 PRINTS PR00601 Bacterioferritin signature 65 85 4.7E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 PRINTS PR00601 Bacterioferritin signature 3 22 4.7E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 PANTHER PTHR30295 1 160 1.3E-49 T 22-04-2016 LK04_RS00860 255dd57a1e5e0fb80f732a6580c12bfc 161 Pfam PF00210 Ferritin-like domain 8 143 9.0E-40 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 SMART SM00490 305 404 1.4E-14 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 SMART SM00487 75 259 1.1E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 Pfam PF00271 Helicase conserved C-terminal domain 286 403 7.0E-11 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 616 697 5.3E-15 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 SUPERFAMILY SSF52540 74 598 1.81E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 SMART SM00847 464 558 1.1E-36 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 Gene3D G3DSA:3.40.50.300 77 233 2.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 14 1296 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 Pfam PF00270 DEAD/DEAH box helicase 82 233 1.5E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 Gene3D G3DSA:3.40.50.300 272 416 3.0E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 Pfam PF11898 Domain of unknown function (DUF3418) 712 1296 2.2E-234 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 PANTHER PTHR18934:SF109 15 701 0.0 T 22-04-2016 LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 PANTHER PTHR18934:SF109 738 866 0.0 T 22-04-2016 LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 SMART SM00382 92 384 8.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 Pfam PF04408 Helicase associated domain (HA2) 466 556 1.9E-17 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 PANTHER PTHR18934 15 701 0.0 T 22-04-2016 LK04_RS08505 b0b27f77bb7e1838106a38dfdfc7b01e 1298 PANTHER PTHR18934 738 866 0.0 T 22-04-2016 LK04_RS07535 b61b16428353bb5f3889f62ec63dbb78 92 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 86 8.5E-9 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 ProSitePatterns PS00786 5'-nucleotidase signature 2. 89 100 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 PANTHER PTHR11575:SF27 3 533 6.3E-194 T 22-04-2016 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 PANTHER PTHR11575 3 533 6.3E-194 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 Gene3D G3DSA:3.60.21.10 9 340 5.8E-93 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 PRINTS PR01607 Apyrase family signature 464 483 2.3E-50 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 PRINTS PR01607 Apyrase family signature 263 283 2.3E-50 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 PRINTS PR01607 Apyrase family signature 397 420 2.3E-50 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 PRINTS PR01607 Apyrase family signature 12 30 2.3E-50 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 PRINTS PR01607 Apyrase family signature 218 241 2.3E-50 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 PRINTS PR01607 Apyrase family signature 187 204 2.3E-50 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 SUPERFAMILY SSF55816 344 520 4.19E-53 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 SUPERFAMILY SSF56300 8 340 3.8E-90 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 Pfam PF02872 5'-nucleotidase, C-terminal domain 345 488 4.6E-36 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 Gene3D G3DSA:3.90.780.10 344 519 5.5E-56 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 LK04_RS13755 140674e104bec76f92d7b93663ccca58 564 Pfam PF00149 Calcineurin-like phosphoesterase 14 234 1.0E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LK04_RS16980 11fbaa5a9e0c4df19c8a2f5200b56a69 199 PANTHER PTHR13170 7 199 1.5E-43 T 22-04-2016 LK04_RS16980 11fbaa5a9e0c4df19c8a2f5200b56a69 199 SUPERFAMILY SSF55729 2 187 4.96E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS16980 11fbaa5a9e0c4df19c8a2f5200b56a69 199 Pfam PF00583 Acetyltransferase (GNAT) family 135 185 1.3E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS16980 11fbaa5a9e0c4df19c8a2f5200b56a69 199 Gene3D G3DSA:3.40.630.30 6 76 1.1E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS16980 11fbaa5a9e0c4df19c8a2f5200b56a69 199 Gene3D G3DSA:3.40.630.30 121 188 1.1E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SMART SM00091 405 472 0.52 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SMART SM00091 263 332 0.31 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SMART SM00091 7 76 0.05 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SMART SM00091 135 204 1.2E-4 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Gene3D G3DSA:3.30.450.20 248 374 5.4E-22 T 22-04-2016 LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Pfam PF13426 PAS domain 276 378 3.7E-11 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Pfam PF13426 PAS domain 20 121 8.1E-11 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Pfam PF13426 PAS domain 148 250 2.8E-12 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Gene3D G3DSA:3.30.70.270 531 697 4.7E-58 T 22-04-2016 LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Pfam PF00990 Diguanylate cyclase, GGDEF domain 530 687 3.7E-52 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Gene3D G3DSA:3.30.450.20 377 517 4.1E-14 T 22-04-2016 LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Gene3D G3DSA:3.30.450.20 123 247 7.2E-24 T 22-04-2016 LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SUPERFAMILY SSF55785 17 121 8.38E-21 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 PANTHER PTHR33121:SF13 602 940 3.4E-81 T 22-04-2016 LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 PANTHER PTHR33121 602 940 3.4E-81 T 22-04-2016 LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SUPERFAMILY SSF141868 706 940 2.09E-86 T 22-04-2016 IPR001633 EAL domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SUPERFAMILY SSF55785 247 374 4.89E-22 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Pfam PF00989 PAS fold 406 516 1.2E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SUPERFAMILY SSF55785 119 246 1.39E-23 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SMART SM00052 701 941 2.5E-108 T 22-04-2016 IPR001633 EAL domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Pfam PF00563 EAL domain 707 936 9.4E-72 T 22-04-2016 IPR001633 EAL domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Gene3D G3DSA:3.20.20.450 705 940 4.3E-90 T 22-04-2016 IPR001633 EAL domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SUPERFAMILY SSF55785 376 517 3.06E-11 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 257 4.9E-19 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 259 386 1.5E-18 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 129 4.0E-17 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 425 525 6.5E-9 T 22-04-2016 IPR000014 PAS domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SMART SM00267 519 691 3.0E-65 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 Gene3D G3DSA:3.30.450.20 20 122 6.2E-19 T 22-04-2016 LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 527 689 6.3E-44 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SMART SM00086 337 379 0.02 T 22-04-2016 IPR001610 PAC motif LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SMART SM00086 478 519 39.0 T 22-04-2016 IPR001610 PAC motif LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SMART SM00086 209 251 0.091 T 22-04-2016 IPR001610 PAC motif LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SMART SM00086 81 123 0.025 T 22-04-2016 IPR001610 PAC motif LK04_RS02220 7c95eb014671f5c6694d5f4ba4a7534f 947 SUPERFAMILY SSF55073 535 691 2.04E-49 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 Pfam PF07729 FCD domain 95 222 6.7E-23 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 Gene3D G3DSA:1.20.120.530 91 235 2.7E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 SMART SM00895 95 223 3.0E-22 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 SUPERFAMILY SSF46785 11 77 2.79E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 5.5E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 SUPERFAMILY SSF48008 92 231 8.63E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 PANTHER PTHR11751 15 111 5.8E-22 T 22-04-2016 LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 SMART SM00345 14 73 2.6E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18420 6592b52e41260d08480fc26d7ce2d8dd 240 Gene3D G3DSA:1.10.10.10 13 77 7.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 Gene3D G3DSA:3.40.228.10 124 308 2.2E-51 T 22-04-2016 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 SUPERFAMILY SSF50692 566 708 1.2E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 Gene3D G3DSA:2.40.40.20 565 688 9.0E-39 T 22-04-2016 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 Pfam PF01568 Molydopterin dinucleotide binding domain 572 682 7.7E-25 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 SMART SM00926 1 49 1.6E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 SUPERFAMILY SSF53706 2 559 8.38E-175 T 22-04-2016 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 Pfam PF04324 BFD-like [2Fe-2S] binding domain 813 860 7.3E-11 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 Gene3D G3DSA:2.20.25.90 2 50 1.2E-16 T 22-04-2016 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 3 21 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 PANTHER PTHR11615 1 706 2.5E-211 T 22-04-2016 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 Pfam PF00384 Molybdopterin oxidoreductase 66 472 3.0E-74 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 Gene3D G3DSA:3.40.50.740 61 123 5.1E-79 T 22-04-2016 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 Gene3D G3DSA:3.40.50.740 309 555 5.1E-79 T 22-04-2016 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 PANTHER PTHR11615:SF119 1 706 2.5E-211 T 22-04-2016 LK04_RS07320 94fc232cdfa9d1e61a84975b3a1c43c9 867 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 2 48 9.1E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LK04_RS19440 5831a60ce4a6dd2b8449f9db75d97876 360 Pfam PF13439 Glycosyltransferase Family 4 9 180 1.1E-16 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LK04_RS19440 5831a60ce4a6dd2b8449f9db75d97876 360 PANTHER PTHR12526 1 358 2.5E-43 T 22-04-2016 LK04_RS19440 5831a60ce4a6dd2b8449f9db75d97876 360 Pfam PF00534 Glycosyl transferases group 1 197 335 5.9E-25 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LK04_RS19440 5831a60ce4a6dd2b8449f9db75d97876 360 PANTHER PTHR12526:SF141 1 358 2.5E-43 T 22-04-2016 LK04_RS19440 5831a60ce4a6dd2b8449f9db75d97876 360 SUPERFAMILY SSF53756 2 357 6.85E-58 T 22-04-2016 LK04_RS19440 5831a60ce4a6dd2b8449f9db75d97876 360 Gene3D G3DSA:3.40.50.2000 196 337 5.4E-16 T 22-04-2016 LK04_RS06180 ad66ae0d3f464ec3bc2556c4ec63ebf9 158 SUPERFAMILY SSF55826 2 156 4.97E-37 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS06180 ad66ae0d3f464ec3bc2556c4ec63ebf9 158 PANTHER PTHR30411:SF5 3 145 1.7E-84 T 22-04-2016 LK04_RS06180 ad66ae0d3f464ec3bc2556c4ec63ebf9 158 Pfam PF04073 Aminoacyl-tRNA editing domain 23 148 1.7E-27 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS06180 ad66ae0d3f464ec3bc2556c4ec63ebf9 158 PANTHER PTHR30411 3 145 1.7E-84 T 22-04-2016 LK04_RS06180 ad66ae0d3f464ec3bc2556c4ec63ebf9 158 Gene3D G3DSA:3.90.960.10 2 149 8.2E-34 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS06800 cc71c521aeaf02ad39235a1702fd0a89 225 PANTHER PTHR41536:SF1 2 225 2.2E-127 T 22-04-2016 LK04_RS06800 cc71c521aeaf02ad39235a1702fd0a89 225 PANTHER PTHR41536 2 225 2.2E-127 T 22-04-2016 LK04_RS06800 cc71c521aeaf02ad39235a1702fd0a89 225 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 225 46.516 T 22-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 LK04_RS06800 cc71c521aeaf02ad39235a1702fd0a89 225 SMART SM00702 1 176 1.2E-26 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 LK04_RS06800 cc71c521aeaf02ad39235a1702fd0a89 225 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 175 7.1E-15 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 LK04_RS14745 6def3da967ec87df1b625f440b2b78e0 243 PANTHER PTHR28047 1 234 8.2E-56 T 22-04-2016 LK04_RS14745 6def3da967ec87df1b625f440b2b78e0 243 PANTHER PTHR28047:SF1 1 234 8.2E-56 T 22-04-2016 LK04_RS14745 6def3da967ec87df1b625f440b2b78e0 243 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 209 2.1E-9 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS07815 0cf283b6e806fa35d5a81f3aa38a1133 321 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 162 309 3.9E-56 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 LK04_RS07815 0cf283b6e806fa35d5a81f3aa38a1133 321 PANTHER PTHR33799:SF3 3 321 1.4E-214 T 22-04-2016 LK04_RS07815 0cf283b6e806fa35d5a81f3aa38a1133 321 Gene3D G3DSA:3.40.35.10 160 320 3.3E-67 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LK04_RS07815 0cf283b6e806fa35d5a81f3aa38a1133 321 SUPERFAMILY SSF52728 160 319 1.57E-54 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LK04_RS07815 0cf283b6e806fa35d5a81f3aa38a1133 321 Gene3D G3DSA:3.40.50.510 3 133 6.2E-48 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LK04_RS07815 0cf283b6e806fa35d5a81f3aa38a1133 321 Pfam PF03610 PTS system fructose IIA component 5 116 6.8E-33 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LK04_RS07815 0cf283b6e806fa35d5a81f3aa38a1133 321 Pfam PF03830 PTS system sorbose subfamily IIB component 162 308 5.2E-55 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LK04_RS07815 0cf283b6e806fa35d5a81f3aa38a1133 321 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 116 1.6E-49 T 22-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS07815 0cf283b6e806fa35d5a81f3aa38a1133 321 SUPERFAMILY SSF53062 3 128 4.71E-37 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LK04_RS07815 0cf283b6e806fa35d5a81f3aa38a1133 321 PANTHER PTHR33799 3 321 1.4E-214 T 22-04-2016 LK04_RS00540 cc11d8d574724a5f724bbc552a361b0f 89 PANTHER PTHR34156 2 89 1.6E-33 T 22-04-2016 LK04_RS00540 cc11d8d574724a5f724bbc552a361b0f 89 SUPERFAMILY SSF159871 2 89 1.96E-27 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS00540 cc11d8d574724a5f724bbc552a361b0f 89 Pfam PF07338 Protein of unknown function (DUF1471) 36 89 1.5E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS00540 cc11d8d574724a5f724bbc552a361b0f 89 PANTHER PTHR34156:SF9 2 89 1.6E-33 T 22-04-2016 LK04_RS00540 cc11d8d574724a5f724bbc552a361b0f 89 Gene3D G3DSA:3.30.1660.10 18 89 2.3E-27 T 22-04-2016 IPR025543 Dodecin-like LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:1.10.8.280 286 406 2.1E-43 T 22-04-2016 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.058 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:1.20.1580.10 407 477 2.8E-53 T 22-04-2016 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:1.20.1580.10 91 129 2.8E-53 T 22-04-2016 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:1.20.1580.10 251 284 2.8E-53 T 22-04-2016 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Pfam PF00005 ABC transporter 806 860 1.5E-5 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 PANTHER PTHR32282 1 942 0.0 T 22-04-2016 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 PANTHER PTHR32282:SF2 1 942 0.0 T 22-04-2016 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:3.40.50.300 2 51 2.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:3.40.50.300 478 597 2.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:3.40.50.300 821 939 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:3.40.50.300 612 692 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:1.20.1580.10 694 820 1.9E-54 T 22-04-2016 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 SUPERFAMILY SSF52540 4 204 1.91E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 SUPERFAMILY SSF52540 446 569 1.91E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:3.30.1490.20 200 249 4.6E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 Gene3D G3DSA:3.30.1490.20 130 153 4.6E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS17270 9c3e5e88fa1a5c9a33d2578247f22cbe 942 SUPERFAMILY SSF52540 613 911 8.05E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 PANTHER PTHR21060:SF15 2 398 3.3E-275 T 22-04-2016 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 PRINTS PR00471 Acetate kinase family signature 325 341 3.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 PRINTS PR00471 Acetate kinase family signature 380 392 3.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 PRINTS PR00471 Acetate kinase family signature 206 227 3.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 PRINTS PR00471 Acetate kinase family signature 6 17 3.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 PRINTS PR00471 Acetate kinase family signature 176 189 3.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 PRINTS PR00471 Acetate kinase family signature 302 315 3.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 TIGRFAM TIGR00016 ackA: acetate kinase 2 399 9.3E-183 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 PANTHER PTHR21060 2 398 3.3E-275 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 Gene3D G3DSA:3.30.420.40 5 207 1.0E-9 T 22-04-2016 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 PIRSF PIRSF000722 2 400 1.1E-142 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 SUPERFAMILY SSF53067 4 199 4.75E-62 T 22-04-2016 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 Gene3D G3DSA:3.30.420.40 208 398 2.4E-73 T 22-04-2016 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 SUPERFAMILY SSF53067 160 398 5.18E-84 T 22-04-2016 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 Pfam PF00871 Acetokinase family 6 393 2.2E-172 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS05455 ac2d84aa32c3a6bbe043e0440f520ec7 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 184.26 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LK04_RS18905 822bd4cf2cffa271ebc356f9e51e3470 341 SMART SM00354 7 78 4.2E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS18905 822bd4cf2cffa271ebc356f9e51e3470 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 55 2.8E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS18905 822bd4cf2cffa271ebc356f9e51e3470 341 Gene3D G3DSA:3.40.50.2300 61 181 2.2E-44 T 22-04-2016 LK04_RS18905 822bd4cf2cffa271ebc356f9e51e3470 341 SUPERFAMILY SSF47413 7 66 8.84E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS18905 822bd4cf2cffa271ebc356f9e51e3470 341 SUPERFAMILY SSF53822 65 325 1.41E-55 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS18905 822bd4cf2cffa271ebc356f9e51e3470 341 Gene3D G3DSA:1.10.260.40 8 60 1.4E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS18905 822bd4cf2cffa271ebc356f9e51e3470 341 Pfam PF13377 Periplasmic binding protein-like domain 175 337 3.6E-21 T 22-04-2016 LK04_RS18905 822bd4cf2cffa271ebc356f9e51e3470 341 PANTHER PTHR30146 7 339 3.8E-106 T 22-04-2016 LK04_RS18905 822bd4cf2cffa271ebc356f9e51e3470 341 PANTHER PTHR30146:SF27 7 339 3.8E-106 T 22-04-2016 LK04_RS18905 822bd4cf2cffa271ebc356f9e51e3470 341 Gene3D G3DSA:3.40.50.2300 182 318 5.3E-24 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 SUPERFAMILY SSF82866 291 491 7.72E-48 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 Gene3D G3DSA:3.30.70.1430 558 643 6.1E-11 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 SUPERFAMILY SSF82714 703 785 7.98E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 SUPERFAMILY SSF82693 41 135 1.22E-22 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PANTHER PTHR32063 1 1018 0.0 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 Gene3D G3DSA:3.30.2090.10 183 264 3.6E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 Gene3D G3DSA:3.30.2090.10 703 784 3.1E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 3.8E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 SUPERFAMILY SSF82693 788 833 3.92E-6 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 SUPERFAMILY SSF82693 665 701 3.92E-6 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1022 26.929 T 22-04-2016 IPR023931 Multidrug resistance protein MdtC LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 SUPERFAMILY SSF82714 183 266 7.59E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 Gene3D G3DSA:3.30.70.1430 41 142 8.0E-29 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 SUPERFAMILY SSF82866 811 1009 3.66E-43 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 SUPERFAMILY SSF82693 555 650 5.58E-16 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 Gene3D G3DSA:1.20.1640.10 285 500 2.6E-58 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 PANTHER PTHR32063:SF34 1 1018 0.0 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 Gene3D G3DSA:1.10.3850.10 794 1010 1.6E-52 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 SUPERFAMILY SSF82693 136 182 2.62E-21 T 22-04-2016 LK04_RS05995 1faf630b6076cd59a7a82d9581497b55 1023 SUPERFAMILY SSF82693 268 324 2.62E-21 T 22-04-2016 LK04_RS16070 c3a14a9f0d4484425b97d6711ee652c7 129 PANTHER PTHR38460:SF1 2 129 2.3E-29 T 22-04-2016 LK04_RS16070 c3a14a9f0d4484425b97d6711ee652c7 129 PANTHER PTHR38460 2 129 2.3E-29 T 22-04-2016 LK04_RS16070 c3a14a9f0d4484425b97d6711ee652c7 129 SUPERFAMILY SSF55331 2 128 1.1E-34 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily LK04_RS16070 c3a14a9f0d4484425b97d6711ee652c7 129 Gene3D G3DSA:3.30.429.10 6 126 4.8E-26 T 22-04-2016 LK04_RS16070 c3a14a9f0d4484425b97d6711ee652c7 129 Pfam PF14552 Tautomerase enzyme 38 117 1.8E-25 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 PIRSF PIRSF000804 1 366 4.5E-116 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 SUPERFAMILY SSF55979 125 244 5.61E-31 T 22-04-2016 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 SUPERFAMILY SSF55979 1 118 1.36E-27 T 22-04-2016 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 Gene3D G3DSA:3.10.150.10 122 248 4.5E-39 T 22-04-2016 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 Gene3D G3DSA:3.10.150.10 1 121 2.9E-32 T 22-04-2016 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 7.8E-43 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 7.1E-113 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 PANTHER PTHR30478 2 366 1.5E-145 T 22-04-2016 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 Gene3D G3DSA:3.10.150.10 249 366 1.9E-37 T 22-04-2016 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.1E-39 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 1.0E-39 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 SUPERFAMILY SSF55979 245 366 2.47E-37 T 22-04-2016 LK04_RS18765 0d6e33d2665e177af0dd7e278fe6844c 366 SMART SM00480 17 362 8.1E-168 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 475 658 4.2E-22 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 SUPERFAMILY SSF53335 145 217 6.04E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 SUPERFAMILY SSF53335 258 373 6.04E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 PANTHER PTHR18895:SF62 401 681 1.4E-129 T 22-04-2016 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 PIRSF PIRSF037618 1 703 1.6E-297 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 SMART SM00981 56 154 5.1E-13 T 22-04-2016 IPR004114 THUMP domain GO:0003723 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 SUPERFAMILY SSF53335 395 701 1.33E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 Pfam PF01170 Putative RNA methylase family UPF0020 162 376 7.6E-60 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 Pfam PF02926 THUMP domain 24 153 8.2E-14 T 22-04-2016 IPR004114 THUMP domain GO:0003723 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 PANTHER PTHR18895 401 681 1.4E-129 T 22-04-2016 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.745 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 307 313 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 Gene3D G3DSA:3.40.50.150 432 701 2.2E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 Gene3D G3DSA:3.40.50.150 148 214 9.0E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 Gene3D G3DSA:3.40.50.150 255 318 9.0E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS11905 084173457bc597e5edaf7e9de8fd1c70 705 Gene3D G3DSA:3.40.50.150 383 404 9.0E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS02740 1e74fb1b5ebf9e92c227e52ea90e1a7c 243 Pfam PF04452 RNA methyltransferase 18 236 3.0E-74 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS02740 1e74fb1b5ebf9e92c227e52ea90e1a7c 243 Gene3D G3DSA:3.40.1280.10 75 242 1.1E-59 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LK04_RS02740 1e74fb1b5ebf9e92c227e52ea90e1a7c 243 SUPERFAMILY SSF75217 75 242 3.09E-51 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LK04_RS02740 1e74fb1b5ebf9e92c227e52ea90e1a7c 243 SUPERFAMILY SSF88697 2 70 2.11E-18 T 22-04-2016 IPR015947 PUA-like domain LK04_RS02740 1e74fb1b5ebf9e92c227e52ea90e1a7c 243 Gene3D G3DSA:2.40.240.20 1 72 3.1E-28 T 22-04-2016 LK04_RS02740 1e74fb1b5ebf9e92c227e52ea90e1a7c 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 9.8E-90 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS02740 1e74fb1b5ebf9e92c227e52ea90e1a7c 243 PANTHER PTHR30027:SF3 1 243 1.6E-101 T 22-04-2016 LK04_RS02740 1e74fb1b5ebf9e92c227e52ea90e1a7c 243 PIRSF PIRSF015601 2 242 1.0E-53 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS02740 1e74fb1b5ebf9e92c227e52ea90e1a7c 243 PANTHER PTHR30027 1 243 1.6E-101 T 22-04-2016 LK04_RS04245 27b3ef1c01fb1194eb9b31b94ac5ac13 457 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 340 7.3E-134 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 LK04_RS04245 27b3ef1c01fb1194eb9b31b94ac5ac13 457 Pfam PF13742 OB-fold nucleic acid binding domain 10 102 1.3E-31 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 LK04_RS04245 27b3ef1c01fb1194eb9b31b94ac5ac13 457 PANTHER PTHR30008:SF0 2 455 1.7E-193 T 22-04-2016 LK04_RS04245 27b3ef1c01fb1194eb9b31b94ac5ac13 457 PANTHER PTHR30008 2 455 1.7E-193 T 22-04-2016 LK04_RS04245 27b3ef1c01fb1194eb9b31b94ac5ac13 457 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.413 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 LK04_RS04245 27b3ef1c01fb1194eb9b31b94ac5ac13 457 Pfam PF02601 Exonuclease VII, large subunit 126 440 4.1E-102 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 LK04_RS18375 bb80792768d09fc5c6d7d8a3655c53ed 154 PANTHER PTHR33164 15 152 4.4E-56 T 22-04-2016 LK04_RS18375 bb80792768d09fc5c6d7d8a3655c53ed 154 PANTHER PTHR33164:SF5 15 152 4.4E-56 T 22-04-2016 LK04_RS18375 bb80792768d09fc5c6d7d8a3655c53ed 154 Gene3D G3DSA:1.10.10.10 9 152 2.9E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18375 bb80792768d09fc5c6d7d8a3655c53ed 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 5.0E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS18375 bb80792768d09fc5c6d7d8a3655c53ed 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 5.0E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS18375 bb80792768d09fc5c6d7d8a3655c53ed 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 78 5.0E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS18375 bb80792768d09fc5c6d7d8a3655c53ed 154 Pfam PF01047 MarR family 45 103 4.4E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS18375 bb80792768d09fc5c6d7d8a3655c53ed 154 SMART SM00347 38 133 3.6E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS18375 bb80792768d09fc5c6d7d8a3655c53ed 154 SUPERFAMILY SSF46785 14 151 1.6E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS11675 f3cf46b06a428bdd5907ac6597c1ae7a 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LK04_RS11675 f3cf46b06a428bdd5907ac6597c1ae7a 182 PIRSF PIRSF000847 1 178 7.6E-42 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LK04_RS11675 f3cf46b06a428bdd5907ac6597c1ae7a 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 7.4E-60 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LK04_RS11675 f3cf46b06a428bdd5907ac6597c1ae7a 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 33.742 T 22-04-2016 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LK04_RS11675 f3cf46b06a428bdd5907ac6597c1ae7a 182 PANTHER PTHR14269:SF13 2 179 3.5E-100 T 22-04-2016 LK04_RS11675 f3cf46b06a428bdd5907ac6597c1ae7a 182 PANTHER PTHR14269 2 179 3.5E-100 T 22-04-2016 LK04_RS11675 f3cf46b06a428bdd5907ac6597c1ae7a 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.1E-17 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LK04_RS18795 d34cb69245c2948db979226a14024055 429 Pfam PF07690 Major Facilitator Superfamily 30 387 1.2E-59 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS18795 d34cb69245c2948db979226a14024055 429 Gene3D G3DSA:1.20.1250.20 21 208 1.8E-47 T 22-04-2016 LK04_RS18795 d34cb69245c2948db979226a14024055 429 PANTHER PTHR11662:SF277 9 428 2.0E-116 T 22-04-2016 LK04_RS18795 d34cb69245c2948db979226a14024055 429 PANTHER PTHR11662 9 428 2.0E-116 T 22-04-2016 LK04_RS18795 d34cb69245c2948db979226a14024055 429 PIRSF PIRSF002808 5 427 2.4E-36 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS18795 d34cb69245c2948db979226a14024055 429 Gene3D G3DSA:1.20.1250.20 229 424 9.2E-33 T 22-04-2016 LK04_RS18795 d34cb69245c2948db979226a14024055 429 SUPERFAMILY SSF103473 14 425 2.09E-86 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS00775 d8a5ad46c414ebce4a198a0602ff284a 279 PANTHER PTHR30468:SF2 1 279 1.1E-97 T 22-04-2016 LK04_RS00775 d8a5ad46c414ebce4a198a0602ff284a 279 Gene3D G3DSA:3.60.130.10 3 279 1.8E-95 T 22-04-2016 LK04_RS00775 d8a5ad46c414ebce4a198a0602ff284a 279 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 8 272 5.9E-65 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 LK04_RS00775 d8a5ad46c414ebce4a198a0602ff284a 279 SUPERFAMILY SSF51197 6 279 2.84E-93 T 22-04-2016 LK04_RS00775 d8a5ad46c414ebce4a198a0602ff284a 279 PANTHER PTHR30468 1 279 1.1E-97 T 22-04-2016 LK04_RS18955 6dd44d029d676bf9f58b1d8101b62596 383 SUPERFAMILY SSF53098 138 305 3.54E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS18955 6dd44d029d676bf9f58b1d8101b62596 383 SUPERFAMILY SSF46689 10 118 1.63E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18955 6dd44d029d676bf9f58b1d8101b62596 383 Pfam PF00665 Integrase core domain 140 259 1.7E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS18955 6dd44d029d676bf9f58b1d8101b62596 383 Gene3D G3DSA:1.10.10.60 17 60 2.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18955 6dd44d029d676bf9f58b1d8101b62596 383 Pfam PF13565 Homeodomain-like domain 38 114 1.5E-10 T 22-04-2016 LK04_RS18955 6dd44d029d676bf9f58b1d8101b62596 383 Gene3D G3DSA:3.30.420.10 138 299 6.8E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS18700 6dd44d029d676bf9f58b1d8101b62596 383 SUPERFAMILY SSF53098 138 305 3.54E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS18700 6dd44d029d676bf9f58b1d8101b62596 383 SUPERFAMILY SSF46689 10 118 1.63E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18700 6dd44d029d676bf9f58b1d8101b62596 383 Pfam PF00665 Integrase core domain 140 259 1.7E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS18700 6dd44d029d676bf9f58b1d8101b62596 383 Gene3D G3DSA:1.10.10.60 17 60 2.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18700 6dd44d029d676bf9f58b1d8101b62596 383 Pfam PF13565 Homeodomain-like domain 38 114 1.5E-10 T 22-04-2016 LK04_RS18700 6dd44d029d676bf9f58b1d8101b62596 383 Gene3D G3DSA:3.30.420.10 138 299 6.8E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS16990 6dd44d029d676bf9f58b1d8101b62596 383 SUPERFAMILY SSF53098 138 305 3.54E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS16990 6dd44d029d676bf9f58b1d8101b62596 383 SUPERFAMILY SSF46689 10 118 1.63E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS16990 6dd44d029d676bf9f58b1d8101b62596 383 Pfam PF00665 Integrase core domain 140 259 1.7E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS16990 6dd44d029d676bf9f58b1d8101b62596 383 Gene3D G3DSA:1.10.10.60 17 60 2.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS16990 6dd44d029d676bf9f58b1d8101b62596 383 Pfam PF13565 Homeodomain-like domain 38 114 1.5E-10 T 22-04-2016 LK04_RS16990 6dd44d029d676bf9f58b1d8101b62596 383 Gene3D G3DSA:3.30.420.10 138 299 6.8E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS10175 6dd44d029d676bf9f58b1d8101b62596 383 SUPERFAMILY SSF53098 138 305 3.54E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS10175 6dd44d029d676bf9f58b1d8101b62596 383 SUPERFAMILY SSF46689 10 118 1.63E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10175 6dd44d029d676bf9f58b1d8101b62596 383 Pfam PF00665 Integrase core domain 140 259 1.7E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS10175 6dd44d029d676bf9f58b1d8101b62596 383 Gene3D G3DSA:1.10.10.60 17 60 2.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10175 6dd44d029d676bf9f58b1d8101b62596 383 Pfam PF13565 Homeodomain-like domain 38 114 1.5E-10 T 22-04-2016 LK04_RS10175 6dd44d029d676bf9f58b1d8101b62596 383 Gene3D G3DSA:3.30.420.10 138 299 6.8E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS19695 4c1bf44c17248716bd242b3c3c66ff9c 118 Pfam PF07226 Protein of unknown function (DUF1422) 3 115 3.4E-52 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 LK04_RS19695 4c1bf44c17248716bd242b3c3c66ff9c 118 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 3 115 3.0E-40 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 LK04_RS08380 5dfbafebac3d8c6064ca958f93673290 540 SUPERFAMILY SSF53850 32 533 4.52E-134 T 22-04-2016 LK04_RS08380 5dfbafebac3d8c6064ca958f93673290 540 Gene3D G3DSA:3.90.76.10 40 219 7.7E-45 T 22-04-2016 LK04_RS08380 5dfbafebac3d8c6064ca958f93673290 540 PANTHER PTHR30290 5 539 0.0 T 22-04-2016 LK04_RS08380 5dfbafebac3d8c6064ca958f93673290 540 PIRSF PIRSF002741 3 537 4.1E-94 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS08380 5dfbafebac3d8c6064ca958f93673290 540 PANTHER PTHR30290:SF28 5 539 0.0 T 22-04-2016 LK04_RS08380 5dfbafebac3d8c6064ca958f93673290 540 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site LK04_RS08380 5dfbafebac3d8c6064ca958f93673290 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 453 5.6E-87 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS08380 5dfbafebac3d8c6064ca958f93673290 540 Gene3D G3DSA:3.10.105.10 290 504 4.1E-53 T 22-04-2016 LK04_RS08445 f3da02785c0a29b3fe79a1c612482a12 539 PANTHER PTHR30290 23 539 0.0 T 22-04-2016 LK04_RS08445 f3da02785c0a29b3fe79a1c612482a12 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 455 5.8E-88 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS08445 f3da02785c0a29b3fe79a1c612482a12 539 Gene3D G3DSA:3.10.105.10 307 507 2.4E-64 T 22-04-2016 LK04_RS08445 f3da02785c0a29b3fe79a1c612482a12 539 Gene3D G3DSA:3.40.190.10 155 306 4.3E-50 T 22-04-2016 LK04_RS08445 f3da02785c0a29b3fe79a1c612482a12 539 PIRSF PIRSF002741 1 539 8.7E-114 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS08445 f3da02785c0a29b3fe79a1c612482a12 539 SUPERFAMILY SSF53850 32 531 2.75E-141 T 22-04-2016 LK04_RS08445 f3da02785c0a29b3fe79a1c612482a12 539 PANTHER PTHR30290:SF23 23 539 0.0 T 22-04-2016 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 Gene3D G3DSA:3.40.50.980 79 266 2.6E-45 T 22-04-2016 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 SUPERFAMILY SSF56801 10 643 2.22E-191 T 22-04-2016 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.3E-19 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.0E-25 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 Gene3D G3DSA:3.30.300.30 518 637 1.3E-29 T 22-04-2016 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 Pfam PF00501 AMP-binding enzyme 83 522 1.2E-93 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 Gene3D G3DSA:2.30.38.10 439 515 1.4E-7 T 22-04-2016 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.152 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 PANTHER PTHR24095:SF178 20 650 0.0 T 22-04-2016 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 22-04-2016 IPR020845 AMP-binding, conserved site LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 PANTHER PTHR24095 20 650 0.0 T 22-04-2016 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 LK04_RS17165 2eb499873bf5e2fd3d822818919d7253 651 Gene3D G3DSA:3.40.50.980 267 424 2.5E-29 T 22-04-2016 LK04_RS10750 43e494004cf9104aafc754011294d0d2 697 PANTHER PTHR32552 47 697 5.2E-155 T 22-04-2016 LK04_RS10750 43e494004cf9104aafc754011294d0d2 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 155 4.3E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS10750 43e494004cf9104aafc754011294d0d2 697 PANTHER PTHR32552:SF6 47 697 5.2E-155 T 22-04-2016 LK04_RS10750 43e494004cf9104aafc754011294d0d2 697 Pfam PF00593 TonB dependent receptor 461 695 1.3E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS10750 43e494004cf9104aafc754011294d0d2 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 62 697 1.6E-91 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LK04_RS10750 43e494004cf9104aafc754011294d0d2 697 Gene3D G3DSA:2.40.170.20 175 697 3.5E-122 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS10750 43e494004cf9104aafc754011294d0d2 697 Gene3D G3DSA:2.170.130.10 39 167 1.5E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS10750 43e494004cf9104aafc754011294d0d2 697 SUPERFAMILY SSF56935 50 697 1.31E-107 T 22-04-2016 LK04_RS01125 ad8c6cdf78a9dfe011a5b49419f9eeb6 341 PANTHER PTHR30085 1 310 6.8E-184 T 22-04-2016 LK04_RS01125 ad8c6cdf78a9dfe011a5b49419f9eeb6 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 6.6E-32 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS01125 ad8c6cdf78a9dfe011a5b49419f9eeb6 341 SUPERFAMILY SSF53850 27 256 3.8E-49 T 22-04-2016 LK04_RS01125 ad8c6cdf78a9dfe011a5b49419f9eeb6 341 Gene3D G3DSA:3.40.190.10 128 224 3.9E-16 T 22-04-2016 LK04_RS01125 ad8c6cdf78a9dfe011a5b49419f9eeb6 341 PANTHER PTHR30085:SF5 1 310 6.8E-184 T 22-04-2016 LK04_RS01125 ad8c6cdf78a9dfe011a5b49419f9eeb6 341 Gene3D G3DSA:3.40.190.10 33 127 1.5E-16 T 22-04-2016 LK04_RS01125 ad8c6cdf78a9dfe011a5b49419f9eeb6 341 Gene3D G3DSA:3.40.190.10 225 251 1.5E-16 T 22-04-2016 LK04_RS01125 ad8c6cdf78a9dfe011a5b49419f9eeb6 341 SMART SM00062 36 265 2.0E-55 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS01125 ad8c6cdf78a9dfe011a5b49419f9eeb6 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 PRINTS PR00783 Major intrinsic protein family signature 2 21 7.0E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 PRINTS PR00783 Major intrinsic protein family signature 79 98 7.0E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 PRINTS PR00783 Major intrinsic protein family signature 136 154 7.0E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 PRINTS PR00783 Major intrinsic protein family signature 205 225 7.0E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 PRINTS PR00783 Major intrinsic protein family signature 166 188 7.0E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 PRINTS PR00783 Major intrinsic protein family signature 42 66 7.0E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 PANTHER PTHR19139:SF103 1 230 4.9E-72 T 22-04-2016 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 Gene3D G3DSA:1.20.1080.10 1 228 2.0E-67 T 22-04-2016 IPR023271 Aquaporin-like LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 PANTHER PTHR19139 1 230 4.9E-72 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 6.0E-59 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 Pfam PF00230 Major intrinsic protein 2 222 2.0E-49 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 ProSitePatterns PS00221 MIP family signature. 60 68 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 SUPERFAMILY SSF81338 1 226 2.62E-65 T 22-04-2016 IPR023271 Aquaporin-like LK04_RS17620 2a54d4318adf97ce191465bc460e3b84 230 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 34.951 T 22-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 Pfam PF00535 Glycosyl transferase family 2 1101 1279 5.8E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 Gene3D G3DSA:3.90.550.10 1101 1345 3.6E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 Pfam PF05045 Rhamnan synthesis protein F 555 782 1.7E-42 T 22-04-2016 IPR007739 Rhamnan synthesis F LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 Gene3D G3DSA:3.40.50.150 58 187 5.7E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 Pfam PF13578 Methyltransferase domain 69 184 9.1E-23 T 22-04-2016 LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 PANTHER PTHR22916 1102 1236 5.4E-31 T 22-04-2016 LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 PANTHER PTHR22916 1256 1348 5.4E-31 T 22-04-2016 LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 SUPERFAMILY SSF53448 1100 1225 2.49E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 SUPERFAMILY SSF53448 1254 1328 2.49E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 Pfam PF04765 Protein of unknown function (DUF616) 882 1034 5.5E-10 T 22-04-2016 IPR006852 Protein of unknown function DUF616 LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 PANTHER PTHR22916:SF9 1102 1236 5.4E-31 T 22-04-2016 LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 PANTHER PTHR22916:SF9 1256 1348 5.4E-31 T 22-04-2016 LK04_RS06165 291da4c85fa59adb8810eb458038a1d1 1379 SUPERFAMILY SSF53335 44 212 9.55E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 Gene3D G3DSA:3.40.50.620 1 179 2.3E-68 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 SMART SM00904 183 307 2.4E-60 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 PANTHER PTHR22749:SF0 1 309 2.3E-136 T 22-04-2016 LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 Gene3D G3DSA:2.40.30.30 180 306 8.9E-40 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 1.1E-114 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 SUPERFAMILY SSF82114 174 307 6.1E-44 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 SUPERFAMILY SSF52374 15 175 2.51E-35 T 22-04-2016 LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 Pfam PF01687 Riboflavin kinase 184 306 1.3E-37 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 PANTHER PTHR22749 1 309 2.3E-136 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 PIRSF PIRSF004491 1 310 9.1E-105 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 LK04_RS15615 8e462c1dbf032a4eba761cc915867c4f 312 Pfam PF06574 FAD synthetase 11 167 1.3E-57 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 SMART SM00283 268 515 4.6E-93 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 PANTHER PTHR32089 140 518 1.6E-178 T 22-04-2016 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 514 1.6E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 Gene3D G3DSA:1.10.287.950 283 487 1.9E-61 T 22-04-2016 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 Pfam PF02203 Tar ligand binding domain homologue 4 172 5.0E-16 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 293 315 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 Pfam PF00672 HAMP domain 196 264 2.1E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 PANTHER PTHR32089:SF48 140 518 1.6E-178 T 22-04-2016 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 1.7E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 1.7E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 1.7E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 1.7E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.7E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 SUPERFAMILY SSF58104 235 516 2.62E-74 T 22-04-2016 LK04_RS08600 da6f16e876cd3b433d3bab6f7221e2d9 558 SMART SM00304 215 267 3.9E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 SMART SM00841 133 188 9.9E-23 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 SUPERFAMILY SSF50104 1 64 5.78E-11 T 22-04-2016 IPR008991 Translation protein SH3-like domain LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.4E-17 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 Gene3D G3DSA:2.30.30.30 1 64 1.2E-14 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 Gene3D G3DSA:2.40.50.140 132 189 3.0E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 PANTHER PTHR30053 1 190 4.2E-126 T 22-04-2016 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 PANTHER PTHR30053:SF5 1 190 4.2E-126 T 22-04-2016 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 SUPERFAMILY SSF50249 67 130 3.38E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 125 7.5E-14 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 4.8E-94 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 Gene3D G3DSA:2.40.50.140 67 131 5.6E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 SMART SM01185 69 125 3.1E-15 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 2.6E-16 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 PIRSF PIRSF005901 1 190 9.5E-59 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 45.84 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP LK04_RS05755 ff33effebcf2b7e50685273f9f66ae55 190 SUPERFAMILY SSF50249 132 189 3.77E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS02065 ce5ff8217b39c07bfabadbb1b6488fad 156 SUPERFAMILY SSF55804 1 150 6.8E-35 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LK04_RS02065 ce5ff8217b39c07bfabadbb1b6488fad 156 PANTHER PTHR30505:SF5 1 149 2.0E-37 T 22-04-2016 LK04_RS02065 ce5ff8217b39c07bfabadbb1b6488fad 156 PANTHER PTHR30505 1 149 2.0E-37 T 22-04-2016 LK04_RS02065 ce5ff8217b39c07bfabadbb1b6488fad 156 Gene3D G3DSA:3.40.930.10 1 150 4.3E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS02065 ce5ff8217b39c07bfabadbb1b6488fad 156 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 6.4E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS02065 ce5ff8217b39c07bfabadbb1b6488fad 156 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 11 134 3.7E-37 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS13900 dbc51c226983cb025362ad1ab6d2a71c 287 Gene3D G3DSA:3.10.129.10 124 285 5.1E-57 T 22-04-2016 IPR029069 HotDog domain LK04_RS13900 dbc51c226983cb025362ad1ab6d2a71c 287 SUPERFAMILY SSF54637 116 283 1.11E-58 T 22-04-2016 IPR029069 HotDog domain LK04_RS13900 dbc51c226983cb025362ad1ab6d2a71c 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.1E-103 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 LK04_RS13900 dbc51c226983cb025362ad1ab6d2a71c 287 PANTHER PTHR11066 1 286 2.8E-115 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 LK04_RS13900 dbc51c226983cb025362ad1ab6d2a71c 287 SUPERFAMILY SSF54637 5 114 5.6E-41 T 22-04-2016 IPR029069 HotDog domain LK04_RS13900 dbc51c226983cb025362ad1ab6d2a71c 287 PANTHER PTHR11066:SF34 1 286 2.8E-115 T 22-04-2016 LK04_RS13900 dbc51c226983cb025362ad1ab6d2a71c 287 Pfam PF13622 Thioesterase-like superfamily 32 282 7.1E-59 T 22-04-2016 LK04_RS13900 dbc51c226983cb025362ad1ab6d2a71c 287 Gene3D G3DSA:3.10.129.10 5 116 8.2E-49 T 22-04-2016 IPR029069 HotDog domain LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 SUPERFAMILY SSF56601 23 466 2.35E-99 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 21 468 3.6E-159 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 PANTHER PTHR30023 23 473 2.7E-135 T 22-04-2016 LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 Gene3D G3DSA:3.40.710.10 227 454 2.7E-61 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 46 447 2.3E-163 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 PANTHER PTHR30023:SF0 23 473 2.7E-135 T 22-04-2016 LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 5.1E-37 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 5.1E-37 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 5.1E-37 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 5.1E-37 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LK04_RS16460 3580bf280b21de9152074fdfbe337c09 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 5.1E-37 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LK04_RS12230 e3d87094b4771d5a2520165c0de62c12 237 PANTHER PTHR30133:SF2 1 237 2.0E-146 T 22-04-2016 LK04_RS12230 e3d87094b4771d5a2520165c0de62c12 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 79 2.0E-12 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS12230 e3d87094b4771d5a2520165c0de62c12 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 231 3.0E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12230 e3d87094b4771d5a2520165c0de62c12 237 SUPERFAMILY SSF161098 8 216 3.66E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12230 e3d87094b4771d5a2520165c0de62c12 237 PANTHER PTHR30133 1 237 2.0E-146 T 22-04-2016 LK04_RS12230 e3d87094b4771d5a2520165c0de62c12 237 Gene3D G3DSA:1.10.3720.10 7 231 4.9E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02810 c6dab100b37e32afd76bb9bb6f87d168 558 PANTHER PTHR33619 87 550 1.2E-23 T 22-04-2016 LK04_RS02810 c6dab100b37e32afd76bb9bb6f87d168 558 Gene3D G3DSA:3.30.1950.10 95 157 7.4E-13 T 22-04-2016 LK04_RS02810 c6dab100b37e32afd76bb9bb6f87d168 558 Gene3D G3DSA:3.10.560.10 160 245 3.9E-8 T 22-04-2016 LK04_RS02810 c6dab100b37e32afd76bb9bb6f87d168 558 Gene3D G3DSA:3.10.560.10 447 508 2.0E-9 T 22-04-2016 LK04_RS02810 c6dab100b37e32afd76bb9bb6f87d168 558 Pfam PF02563 Polysaccharide biosynthesis/export protein 89 158 2.3E-14 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 LK04_RS02810 c6dab100b37e32afd76bb9bb6f87d168 558 Pfam PF10531 SLBB domain 461 507 1.8E-5 T 22-04-2016 IPR019554 Soluble ligand binding domain LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 SUPERFAMILY SSF52943 2 288 5.89E-96 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.0E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.3E-111 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 PANTHER PTHR11693 1 288 8.0E-136 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 Gene3D G3DSA:1.10.287.80 203 236 2.3E-39 T 22-04-2016 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 Gene3D G3DSA:1.10.287.80 19 60 2.3E-39 T 22-04-2016 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.129 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 Pfam PF00231 ATP synthase 5 287 7.2E-91 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 Gene3D G3DSA:3.40.1380.10 63 191 1.9E-42 T 22-04-2016 LK04_RS19010 aee93a8ce895e88e3d44d854260ab1f5 288 Gene3D G3DSA:1.10.287.80 237 283 3.5E-30 T 22-04-2016 LK04_RS12210 3ab38515c41fa6482032d304bf5e25cd 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 25.202 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 LK04_RS12210 3ab38515c41fa6482032d304bf5e25cd 106 Gene3D G3DSA:3.30.110.70 1 105 2.4E-39 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 LK04_RS12210 3ab38515c41fa6482032d304bf5e25cd 106 Pfam PF01906 Putative heavy-metal-binding 1 105 2.1E-41 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 LK04_RS12210 3ab38515c41fa6482032d304bf5e25cd 106 PANTHER PTHR34068 1 106 5.9E-47 T 22-04-2016 LK04_RS12210 3ab38515c41fa6482032d304bf5e25cd 106 PANTHER PTHR34068:SF1 1 106 5.9E-47 T 22-04-2016 LK04_RS12210 3ab38515c41fa6482032d304bf5e25cd 106 SUPERFAMILY SSF117782 1 105 1.7E-38 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 PANTHER PTHR11451 4 244 5.1E-161 T 22-04-2016 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 PANTHER PTHR11451 399 572 5.1E-161 T 22-04-2016 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 Gene3D G3DSA:3.90.960.10 257 388 6.7E-30 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 Gene3D G3DSA:3.40.50.800 472 571 9.0E-31 T 22-04-2016 IPR004154 Anticodon-binding LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 4.9E-23 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 Gene3D G3DSA:3.30.930.10 12 234 1.9E-108 T 22-04-2016 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 Gene3D G3DSA:3.30.930.10 389 471 1.9E-108 T 22-04-2016 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 SUPERFAMILY SSF55826 219 390 3.27E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 5.8E-268 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 Pfam PF03129 Anticodon binding domain 475 566 9.9E-20 T 22-04-2016 IPR004154 Anticodon-binding LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 PIRSF PIRSF001535 1 572 1.6E-275 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 8.9E-50 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 PANTHER PTHR11451:SF3 4 244 5.1E-161 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 PANTHER PTHR11451:SF3 399 572 5.1E-161 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.7E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.7E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.7E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.7E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.679 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 SUPERFAMILY SSF55681 407 478 1.27E-107 T 22-04-2016 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 SUPERFAMILY SSF55681 10 237 1.27E-107 T 22-04-2016 LK04_RS14865 89cc42211836099061c66a7529afc8c0 572 SUPERFAMILY SSF52954 463 571 2.27E-33 T 22-04-2016 IPR004154 Anticodon-binding LK04_RS19385 0586108e96e83a764ce2fbcfce4c461f 78 SUPERFAMILY SSF143800 2 77 2.94E-30 T 22-04-2016 LK04_RS19385 0586108e96e83a764ce2fbcfce4c461f 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 3.3E-28 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19385 0586108e96e83a764ce2fbcfce4c461f 78 Gene3D G3DSA:2.30.170.40 2 77 4.1E-36 T 22-04-2016 LK04_RS19385 0586108e96e83a764ce2fbcfce4c461f 78 Pfam PF00830 Ribosomal L28 family 3 62 5.2E-26 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 LK04_RS19385 0586108e96e83a764ce2fbcfce4c461f 78 PANTHER PTHR13528 1 74 1.8E-34 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 LK04_RS19385 0586108e96e83a764ce2fbcfce4c461f 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.346 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 32.031 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 Pfam PF01553 Acyltransferase 283 425 1.1E-24 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 PIRSF PIRSF500064 2 807 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 PANTHER PTHR12563 145 804 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 PANTHER PTHR12563 1 117 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 PIRSF PIRSF000437 19 807 1.8E-302 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 PANTHER PTHR12563:SF14 145 804 0.0 T 22-04-2016 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 PANTHER PTHR12563:SF14 1 117 0.0 T 22-04-2016 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 SUPERFAMILY SSF69593 257 490 1.09E-24 T 22-04-2016 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 800 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LK04_RS17350 3c3df5be2944d0bb2a75b1c77eb2eb73 807 SMART SM00563 301 428 2.9E-27 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS01685 44c8e2a3e6f64d55cf392c5b394b538c 482 PANTHER PTHR30524:SF1 2 482 1.9E-255 T 22-04-2016 LK04_RS01685 44c8e2a3e6f64d55cf392c5b394b538c 482 Gene3D G3DSA:3.40.50.720 3 261 3.1E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01685 44c8e2a3e6f64d55cf392c5b394b538c 482 PANTHER PTHR30524 2 482 1.9E-255 T 22-04-2016 LK04_RS01685 44c8e2a3e6f64d55cf392c5b394b538c 482 SUPERFAMILY SSF48179 272 481 9.18E-49 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS01685 44c8e2a3e6f64d55cf392c5b394b538c 482 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 456 1.7E-59 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LK04_RS01685 44c8e2a3e6f64d55cf392c5b394b538c 482 SUPERFAMILY SSF51735 2 255 2.68E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01685 44c8e2a3e6f64d55cf392c5b394b538c 482 Gene3D G3DSA:1.10.1040.10 271 480 5.2E-63 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS01685 44c8e2a3e6f64d55cf392c5b394b538c 482 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 1.5E-27 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LK04_RS03365 61562392889e95b77a938050fee80f6c 519 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 115 516 7.6E-145 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 LK04_RS03365 61562392889e95b77a938050fee80f6c 519 SMART SM00858 18 88 7.5E-14 T 22-04-2016 IPR013974 SAF domain LK04_RS03365 61562392889e95b77a938050fee80f6c 519 Pfam PF08666 SAF domain 18 86 8.5E-12 T 22-04-2016 IPR013974 SAF domain LK04_RS03365 61562392889e95b77a938050fee80f6c 519 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 2 519 78.803 T 22-04-2016 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497|UniPathway: UPA00565 LK04_RS03365 61562392889e95b77a938050fee80f6c 519 PANTHER PTHR30536 1 519 0.0 T 22-04-2016 LK04_RS03365 61562392889e95b77a938050fee80f6c 519 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 10 519 4.7E-280 T 22-04-2016 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497|UniPathway: UPA00565 LK04_RS03365 61562392889e95b77a938050fee80f6c 519 PANTHER PTHR30536:SF1 1 519 0.0 T 22-04-2016 LK04_RS12660 254390bc15abbb6d48bf2f4a223bc69c 388 SUPERFAMILY SSF161098 179 375 2.62E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12660 254390bc15abbb6d48bf2f4a223bc69c 388 PANTHER PTHR30177 93 379 1.8E-133 T 22-04-2016 LK04_RS12660 254390bc15abbb6d48bf2f4a223bc69c 388 PANTHER PTHR30177:SF8 93 379 1.8E-133 T 22-04-2016 LK04_RS12660 254390bc15abbb6d48bf2f4a223bc69c 388 Gene3D G3DSA:1.10.3720.10 163 376 2.3E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12660 254390bc15abbb6d48bf2f4a223bc69c 388 Gene3D G3DSA:1.10.3720.10 12 35 2.3E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12660 254390bc15abbb6d48bf2f4a223bc69c 388 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 199 385 8.8E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02185 b0b3e072d8ba9c6db5e66ab1b2c6f778 266 Gene3D G3DSA:3.90.260.10 161 247 2.6E-14 T 22-04-2016 IPR002931 Transglutaminase-like LK04_RS02185 b0b3e072d8ba9c6db5e66ab1b2c6f778 266 Pfam PF01841 Transglutaminase-like superfamily 121 215 1.4E-24 T 22-04-2016 IPR002931 Transglutaminase-like LK04_RS02185 b0b3e072d8ba9c6db5e66ab1b2c6f778 266 PANTHER PTHR33490:SF5 1 261 9.5E-78 T 22-04-2016 LK04_RS02185 b0b3e072d8ba9c6db5e66ab1b2c6f778 266 SUPERFAMILY SSF54001 7 244 6.48E-42 T 22-04-2016 LK04_RS02185 b0b3e072d8ba9c6db5e66ab1b2c6f778 266 PANTHER PTHR33490 1 261 9.5E-78 T 22-04-2016 LK04_RS02185 b0b3e072d8ba9c6db5e66ab1b2c6f778 266 SMART SM00460 156 218 1.7E-18 T 22-04-2016 IPR002931 Transglutaminase-like LK04_RS02185 b0b3e072d8ba9c6db5e66ab1b2c6f778 266 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 2.4E-20 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal LK04_RS16030 35577c61111bfa2ee567046f0a07c710 406 ProSitePatterns PS00217 Sugar transport proteins signature 2. 107 132 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS16030 35577c61111bfa2ee567046f0a07c710 406 PANTHER PTHR23508:SF10 5 398 9.7E-145 T 22-04-2016 LK04_RS16030 35577c61111bfa2ee567046f0a07c710 406 Gene3D G3DSA:1.20.1250.20 13 197 2.8E-34 T 22-04-2016 LK04_RS16030 35577c61111bfa2ee567046f0a07c710 406 PANTHER PTHR23508 5 398 9.7E-145 T 22-04-2016 LK04_RS16030 35577c61111bfa2ee567046f0a07c710 406 Pfam PF07690 Major Facilitator Superfamily 21 349 5.5E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS16030 35577c61111bfa2ee567046f0a07c710 406 Gene3D G3DSA:1.20.1250.20 209 387 6.6E-24 T 22-04-2016 LK04_RS16030 35577c61111bfa2ee567046f0a07c710 406 SUPERFAMILY SSF103473 6 396 5.23E-74 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 7.9E-51 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 Gene3D G3DSA:3.40.50.720 121 297 8.8E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 Gene3D G3DSA:3.30.70.260 324 411 2.7E-28 T 22-04-2016 LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 7.7E-35 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 PANTHER PTHR10996 1 370 6.7E-244 T 22-04-2016 LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 Pfam PF01842 ACT domain 347 403 6.9E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 PANTHER PTHR10996:SF18 1 370 6.7E-244 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 SUPERFAMILY SSF51735 108 295 1.63E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 SUPERFAMILY SSF52283 7 137 3.4E-50 T 22-04-2016 LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 SUPERFAMILY SSF55021 337 411 1.95E-18 T 22-04-2016 LK04_RS02930 d1414784c89fc6f2e6410aab2c4b3bfe 412 Gene3D G3DSA:3.40.50.720 8 120 7.2E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 PIRSF PIRSF000171 1 580 3.9E-48 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 SUPERFAMILY SSF56425 236 356 1.03E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 Gene3D G3DSA:1.20.58.100 446 554 1.1E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 PANTHER PTHR11632:SF5 1 573 0.0 T 22-04-2016 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 Gene3D G3DSA:3.50.50.60 351 425 5.5E-119 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 Gene3D G3DSA:3.50.50.60 6 242 5.5E-119 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 PANTHER PTHR11632 1 573 0.0 T 22-04-2016 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 3.3E-277 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 SUPERFAMILY SSF51905 359 429 2.59E-75 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 SUPERFAMILY SSF51905 5 259 2.59E-75 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 Gene3D G3DSA:4.10.80.40 555 588 2.0E-21 T 22-04-2016 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 2.5E-241 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 SUPERFAMILY SSF46977 453 588 9.94E-46 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 8.7E-35 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 Gene3D G3DSA:3.90.700.10 243 349 1.1E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LK04_RS13105 c856ab8dce62c73763096fc7cb0676c3 588 Pfam PF00890 FAD binding domain 9 405 4.2E-119 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 SUPERFAMILY SSF46785 17 88 1.13E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 247 1.6E-100 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 PANTHER PTHR11751:SF364 18 108 3.4E-42 T 22-04-2016 LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 SMART SM00345 25 84 2.2E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 PANTHER PTHR11751 18 108 3.4E-42 T 22-04-2016 LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 Gene3D G3DSA:3.40.1410.10 102 238 8.1E-49 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 5.4E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 SMART SM00866 105 242 4.6E-34 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 SUPERFAMILY SSF64288 72 247 3.14E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 Pfam PF07702 UTRA domain 105 242 1.4E-33 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LK04_RS12550 ed937b01872f40b2b201400babf725ae 251 Gene3D G3DSA:1.10.10.10 17 88 1.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12085 101781a959f0c53a51f273259a25cbe5 361 Gene3D G3DSA:3.40.640.10 17 257 2.7E-102 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS12085 101781a959f0c53a51f273259a25cbe5 361 Gene3D G3DSA:3.90.1150.10 259 360 9.1E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS12085 101781a959f0c53a51f273259a25cbe5 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LK04_RS12085 101781a959f0c53a51f273259a25cbe5 361 SUPERFAMILY SSF53383 3 361 1.66E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS12085 101781a959f0c53a51f273259a25cbe5 361 PANTHER PTHR21152 3 361 3.9E-184 T 22-04-2016 LK04_RS12085 101781a959f0c53a51f273259a25cbe5 361 PIRSF PIRSF000525 1 361 1.6E-145 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 LK04_RS12085 101781a959f0c53a51f273259a25cbe5 361 Pfam PF00266 Aminotransferase class-V 4 349 5.9E-63 T 22-04-2016 IPR000192 Aminotransferase class V domain LK04_RS12085 101781a959f0c53a51f273259a25cbe5 361 PANTHER PTHR21152:SF1 3 361 3.9E-184 T 22-04-2016 LK04_RS12085 101781a959f0c53a51f273259a25cbe5 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 50.57 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 LK04_RS12085 101781a959f0c53a51f273259a25cbe5 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 2.2E-154 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 LK04_RS15115 34a2820bf89aff2bb3aeccd15694939c 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.8E-46 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LK04_RS15115 34a2820bf89aff2bb3aeccd15694939c 161 Gene3D G3DSA:3.30.70.560 3 154 3.4E-57 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LK04_RS15115 34a2820bf89aff2bb3aeccd15694939c 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 7.0E-37 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LK04_RS15115 34a2820bf89aff2bb3aeccd15694939c 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LK04_RS15115 34a2820bf89aff2bb3aeccd15694939c 161 SUPERFAMILY SSF55083 1 157 1.19E-54 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LK04_RS15115 34a2820bf89aff2bb3aeccd15694939c 161 PANTHER PTHR20941 1 157 1.1E-68 T 22-04-2016 LK04_RS10995 8abc22ecdce1c34c1a63034b7ebbce73 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.0E-17 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 LK04_RS10995 8abc22ecdce1c34c1a63034b7ebbce73 82 PANTHER PTHR33884:SF2 1 81 2.0E-35 T 22-04-2016 LK04_RS10995 8abc22ecdce1c34c1a63034b7ebbce73 82 PANTHER PTHR33884 1 81 2.0E-35 T 22-04-2016 LK04_RS11055 73424f3f9233439c3071da595d13ecbb 220 SUPERFAMILY SSF56281 27 182 8.12E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS11055 73424f3f9233439c3071da595d13ecbb 220 Gene3D G3DSA:3.60.15.10 20 183 3.8E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS11055 73424f3f9233439c3071da595d13ecbb 220 SMART SM00849 25 184 0.0028 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS00640 3ec455601bf6b571f6130b4c37b68c9b 362 Gene3D G3DSA:3.40.50.1970 2 172 5.6E-66 T 22-04-2016 LK04_RS00640 3ec455601bf6b571f6130b4c37b68c9b 362 PANTHER PTHR21090 1 359 3.8E-209 T 22-04-2016 LK04_RS00640 3ec455601bf6b571f6130b4c37b68c9b 362 SUPERFAMILY SSF56796 4 357 7.46E-116 T 22-04-2016 LK04_RS00640 3ec455601bf6b571f6130b4c37b68c9b 362 PIRSF PIRSF001455 12 360 7.4E-108 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS00640 3ec455601bf6b571f6130b4c37b68c9b 362 Pfam PF01761 3-dehydroquinate synthase 67 325 2.7E-110 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS00640 3ec455601bf6b571f6130b4c37b68c9b 362 Gene3D G3DSA:1.20.1090.10 173 356 4.4E-67 T 22-04-2016 LK04_RS00640 3ec455601bf6b571f6130b4c37b68c9b 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 355 7.5E-122 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS00640 3ec455601bf6b571f6130b4c37b68c9b 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.091 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 Pfam PF00294 pfkB family carbohydrate kinase 4 296 9.7E-63 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 PANTHER PTHR10584:SF166 1 306 9.3E-91 T 22-04-2016 LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 PANTHER PTHR10584 1 306 9.3E-91 T 22-04-2016 LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 SUPERFAMILY SSF53613 4 305 2.65E-76 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 Gene3D G3DSA:3.40.1190.20 2 307 2.0E-87 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 PRINTS PR00990 Ribokinase signature 7 28 5.6E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 PRINTS PR00990 Ribokinase signature 175 190 5.6E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 PRINTS PR00990 Ribokinase signature 34 53 5.6E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 PRINTS PR00990 Ribokinase signature 219 230 5.6E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS04520 6fb5e73434a1e65151888c342ba6c859 320 PRINTS PR00990 Ribokinase signature 107 120 5.6E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS13305 c3008e87afeacc6aac9bf06c429ed237 357 PANTHER PTHR30473:SF1 1 344 2.6E-207 T 22-04-2016 LK04_RS13305 c3008e87afeacc6aac9bf06c429ed237 357 Pfam PF02562 PhoH-like protein 118 321 1.7E-95 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 LK04_RS13305 c3008e87afeacc6aac9bf06c429ed237 357 SUPERFAMILY SSF52540 117 319 7.13E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13305 c3008e87afeacc6aac9bf06c429ed237 357 Gene3D G3DSA:3.40.50.300 118 321 7.7E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13305 c3008e87afeacc6aac9bf06c429ed237 357 PANTHER PTHR30473 1 344 2.6E-207 T 22-04-2016 LK04_RS09260 0cc7d1923faa0a5c862bd932fc560026 623 PANTHER PTHR35370 2 623 3.9E-246 T 22-04-2016 LK04_RS09260 0cc7d1923faa0a5c862bd932fc560026 623 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 623 9.6E-193 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like LK04_RS09260 0cc7d1923faa0a5c862bd932fc560026 623 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 621 3.0E-220 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like LK04_RS09260 0cc7d1923faa0a5c862bd932fc560026 623 PIRSF PIRSF028304 1 623 5.4E-186 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like LK04_RS09260 0cc7d1923faa0a5c862bd932fc560026 623 PANTHER PTHR35370:SF1 2 623 3.9E-246 T 22-04-2016 LK04_RS02455 d15865c146f139042d36d20db5926b38 188 PANTHER PTHR35446:SF2 11 182 7.5E-43 T 22-04-2016 LK04_RS02455 d15865c146f139042d36d20db5926b38 188 Pfam PF02627 Carboxymuconolactone decarboxylase family 52 121 1.3E-12 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LK04_RS02455 d15865c146f139042d36d20db5926b38 188 SUPERFAMILY SSF69118 9 182 7.2E-43 T 22-04-2016 IPR029032 AhpD-like LK04_RS02455 d15865c146f139042d36d20db5926b38 188 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 70 99 1.0E-9 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LK04_RS02455 d15865c146f139042d36d20db5926b38 188 Gene3D G3DSA:1.20.1290.10 148 183 3.6E-33 T 22-04-2016 IPR029032 AhpD-like LK04_RS02455 d15865c146f139042d36d20db5926b38 188 Gene3D G3DSA:1.20.1290.10 8 97 3.6E-33 T 22-04-2016 IPR029032 AhpD-like LK04_RS02455 d15865c146f139042d36d20db5926b38 188 PANTHER PTHR35446 11 182 7.5E-43 T 22-04-2016 LK04_RS02455 d15865c146f139042d36d20db5926b38 188 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 14 184 2.0E-51 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related LK04_RS10965 708148b124cf670bcacc5a5a5668c5bc 245 Gene3D G3DSA:3.20.20.140 1 236 8.5E-65 T 22-04-2016 LK04_RS10965 708148b124cf670bcacc5a5a5668c5bc 245 SMART SM00481 4 78 1.4E-19 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LK04_RS10965 708148b124cf670bcacc5a5a5668c5bc 245 SUPERFAMILY SSF89550 3 238 9.42E-65 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LK04_RS10965 708148b124cf670bcacc5a5a5668c5bc 245 Pfam PF02811 PHP domain 5 158 2.2E-8 T 22-04-2016 IPR004013 PHP domain GO:0003824 LK04_RS10965 708148b124cf670bcacc5a5a5668c5bc 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 48.665 T 22-04-2016 IPR023710 Probable phosphatase YcdX GO:0008270 LK04_RS10965 708148b124cf670bcacc5a5a5668c5bc 245 PANTHER PTHR36928 1 245 2.7E-105 T 22-04-2016 LK04_RS04160 9aad4a1816b807a8d730054ca4ca8745 255 Pfam PF14581 SseB protein C-terminal domain 133 239 6.3E-32 T 22-04-2016 IPR027945 SseB protein, C-terminal LK04_RS04160 9aad4a1816b807a8d730054ca4ca8745 255 Pfam PF07179 SseB protein N-terminal domain 5 116 3.1E-23 T 22-04-2016 IPR009839 SseB protein N-terminal domain LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 Pfam PF00005 ABC transporter 21 211 4.5E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 PANTHER PTHR24220:SF358 102 290 1.2E-112 T 22-04-2016 LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 PANTHER PTHR24220:SF358 7 83 1.2E-112 T 22-04-2016 LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 PANTHER PTHR24220 102 290 1.2E-112 T 22-04-2016 LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 PANTHER PTHR24220 7 83 1.2E-112 T 22-04-2016 LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 SUPERFAMILY SSF52540 4 66 1.92E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 SUPERFAMILY SSF52540 99 283 1.92E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 262 283 5.1E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 SMART SM00382 30 261 1.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 Gene3D G3DSA:3.40.50.300 2 282 9.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06780 bf20bcf84edecd2d5978f57a3bbd1bf5 291 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS19350 8a7a3392e0bac5205f50e044c1520a25 394 PANTHER PTHR10590 4 394 9.4E-218 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 LK04_RS19350 8a7a3392e0bac5205f50e044c1520a25 394 PANTHER PTHR10590:SF13 4 394 9.4E-218 T 22-04-2016 LK04_RS19350 8a7a3392e0bac5205f50e044c1520a25 394 Pfam PF07670 Nucleoside recognition 92 190 7.2E-6 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 LK04_RS19350 8a7a3392e0bac5205f50e044c1520a25 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 1.8E-17 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 LK04_RS19350 8a7a3392e0bac5205f50e044c1520a25 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 393 2.3E-57 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.514 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 SUPERFAMILY SSF50104 6 63 4.75E-17 T 22-04-2016 IPR008991 Translation protein SH3-like domain LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 1.6E-74 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 Gene3D G3DSA:2.40.50.140 130 187 6.2E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 Gene3D G3DSA:2.40.50.140 66 129 4.2E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 Gene3D G3DSA:2.30.30.30 2 64 2.0E-25 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 SMART SM00841 131 186 5.0E-31 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 3.6E-20 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.4E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 PANTHER PTHR30053 1 188 1.2E-89 T 22-04-2016 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 SUPERFAMILY SSF50249 130 187 4.63E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 SMART SM01185 69 123 6.2E-23 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 SUPERFAMILY SSF50249 68 128 1.33E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 61 1.6E-23 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 LK04_RS16730 c2ce842c2571f2dd1ec3976e559749b8 188 PIRSF PIRSF005901 2 188 1.3E-64 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 LK04_RS19535 e7e472da3ff38f7952c62f0d9b453ba1 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 4.4E-27 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain LK04_RS19535 e7e472da3ff38f7952c62f0d9b453ba1 300 PANTHER PTHR11562:SF55 1 296 3.8E-120 T 22-04-2016 LK04_RS19535 e7e472da3ff38f7952c62f0d9b453ba1 300 Gene3D G3DSA:1.20.1510.10 11 206 1.8E-42 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain LK04_RS19535 e7e472da3ff38f7952c62f0d9b453ba1 300 PANTHER PTHR11562 1 296 3.8E-120 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LK04_RS19535 e7e472da3ff38f7952c62f0d9b453ba1 300 Gene3D G3DSA:3.30.70.1350 207 288 1.8E-31 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain LK04_RS19535 e7e472da3ff38f7952c62f0d9b453ba1 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 61.539 T 22-04-2016 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 LK04_RS19535 e7e472da3ff38f7952c62f0d9b453ba1 300 SUPERFAMILY SSF160240 209 288 1.96E-25 T 22-04-2016 LK04_RS19535 e7e472da3ff38f7952c62f0d9b453ba1 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 1.6E-73 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LK04_RS19535 e7e472da3ff38f7952c62f0d9b453ba1 300 Pfam PF01545 Cation efflux family 15 206 2.0E-40 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LK04_RS19535 e7e472da3ff38f7952c62f0d9b453ba1 300 SUPERFAMILY SSF161111 8 207 5.62E-50 T 22-04-2016 LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 5.2E-227 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 SUPERFAMILY SSF50129 321 372 1.88E-12 T 22-04-2016 IPR011032 GroES-like LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 Pfam PF00107 Zinc-binding dehydrogenase 200 325 1.8E-23 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 SUPERFAMILY SSF50129 3 188 1.36E-74 T 22-04-2016 IPR011032 GroES-like LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 SUPERFAMILY SSF51735 163 337 3.09E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 Gene3D G3DSA:3.40.50.720 193 312 1.5E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 157 4.6E-26 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 PANTHER PTHR11695:SF560 131 374 2.2E-221 T 22-04-2016 LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 PANTHER PTHR11695:SF560 18 111 2.2E-221 T 22-04-2016 LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 Gene3D G3DSA:3.90.180.10 3 192 4.5E-70 T 22-04-2016 IPR011032 GroES-like LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 PANTHER PTHR11695 131 374 2.2E-221 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 PANTHER PTHR11695 18 111 2.2E-221 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LK04_RS05815 220b36a994ea1de406611465eb9ff227 374 SMART SM00829 15 370 0.0021 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS03955 47634b8a1b2ff220df04dd6f31b0c04f 115 PANTHER PTHR37482:SF1 1 108 1.8E-49 T 22-04-2016 LK04_RS03955 47634b8a1b2ff220df04dd6f31b0c04f 115 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 31.151 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE LK04_RS03955 47634b8a1b2ff220df04dd6f31b0c04f 115 Pfam PF04355 SmpA / OmlA family 35 104 2.4E-26 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 LK04_RS03955 47634b8a1b2ff220df04dd6f31b0c04f 115 PANTHER PTHR37482 1 108 1.8E-49 T 22-04-2016 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 338 4.8E-72 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 Gene3D G3DSA:3.90.700.10 719 857 4.1E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 Pfam PF04205 FMN-binding domain 395 461 1.8E-6 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 PANTHER PTHR11632 482 924 1.5E-136 T 22-04-2016 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 Pfam PF00890 FAD binding domain 483 905 6.1E-86 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 Gene3D G3DSA:3.20.20.70 3 341 2.5E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 483 916 1.2E-154 T 22-04-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 SUPERFAMILY SSF51905 864 925 2.19E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 SUPERFAMILY SSF51905 461 736 2.19E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 SMART SM00900 392 464 0.0044 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 SUPERFAMILY SSF56425 719 865 1.64E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 Gene3D G3DSA:3.50.50.60 861 921 1.4E-98 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 Gene3D G3DSA:3.50.50.60 476 713 1.4E-98 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS10920 50d725832435b7ff296ab24279f2ee43 926 SUPERFAMILY SSF51395 5 347 2.29E-96 T 22-04-2016 LK04_RS10810 a3789b5204273218a31586c01af880c8 167 Pfam PF04229 GrpB protein 4 161 6.5E-50 T 22-04-2016 IPR007344 GrpB/Dephospho-CoA kinase LK04_RS10810 a3789b5204273218a31586c01af880c8 167 Gene3D G3DSA:3.30.460.10 2 164 1.5E-56 T 22-04-2016 LK04_RS10810 a3789b5204273218a31586c01af880c8 167 PANTHER PTHR34822 1 165 7.0E-53 T 22-04-2016 LK04_RS10810 a3789b5204273218a31586c01af880c8 167 SUPERFAMILY SSF81301 5 165 1.18E-50 T 22-04-2016 LK04_RS08905 061b0870c2711a9925b5804cc998969f 328 Gene3D G3DSA:3.40.50.2300 35 147 1.4E-22 T 22-04-2016 LK04_RS08905 061b0870c2711a9925b5804cc998969f 328 Pfam PF13407 Periplasmic binding protein domain 37 287 1.7E-56 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS08905 061b0870c2711a9925b5804cc998969f 328 Gene3D G3DSA:3.40.50.2300 148 280 6.3E-31 T 22-04-2016 LK04_RS08905 061b0870c2711a9925b5804cc998969f 328 PANTHER PTHR32196 1 297 7.5E-78 T 22-04-2016 LK04_RS08905 061b0870c2711a9925b5804cc998969f 328 PANTHER PTHR32196:SF36 1 297 7.5E-78 T 22-04-2016 LK04_RS08905 061b0870c2711a9925b5804cc998969f 328 SUPERFAMILY SSF53822 36 328 6.85E-60 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS14040 f77d9574e4083f623d3516143a82d080 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 LK04_RS14040 f77d9574e4083f623d3516143a82d080 506 Gene3D G3DSA:3.40.309.10 271 469 8.4E-61 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS14040 f77d9574e4083f623d3516143a82d080 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LK04_RS14040 f77d9574e4083f623d3516143a82d080 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 LK04_RS14040 f77d9574e4083f623d3516143a82d080 506 Pfam PF00171 Aldehyde dehydrogenase family 34 493 5.1E-162 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS14040 f77d9574e4083f623d3516143a82d080 506 Gene3D G3DSA:3.40.605.10 18 270 1.0E-90 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS14040 f77d9574e4083f623d3516143a82d080 506 SUPERFAMILY SSF53720 11 498 3.14E-160 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS14040 f77d9574e4083f623d3516143a82d080 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 PANTHER PTHR11778:SF0 1 429 2.0E-219 T 22-04-2016 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 2.6E-178 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 PIRSF PIRSF001529 1 430 8.4E-185 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 Gene3D G3DSA:3.30.930.10 105 427 2.0E-140 T 22-04-2016 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 Gene3D G3DSA:1.10.287.40 1 104 2.5E-28 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.6E-33 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 PANTHER PTHR11778 1 429 2.0E-219 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 SUPERFAMILY SSF55681 116 424 2.57E-99 T 22-04-2016 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 1.6E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 1.6E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 1.6E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 1.6E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 1.6E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 SUPERFAMILY SSF46589 1 112 2.46E-32 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 229 406 7.2E-37 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS12120 e205b5ca15b11ccd6a8172c1a727d827 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.682 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LK04_RS10565 c981e94126710ab7bf27321aedade463 488 Pfam PF00171 Aldehyde dehydrogenase family 9 454 5.3E-122 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS10565 c981e94126710ab7bf27321aedade463 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 238 245 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LK04_RS10565 c981e94126710ab7bf27321aedade463 488 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 482 56.573 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 LK04_RS10565 c981e94126710ab7bf27321aedade463 488 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 482 1.4E-245 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 LK04_RS10565 c981e94126710ab7bf27321aedade463 488 Gene3D G3DSA:3.40.309.10 253 439 4.2E-43 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS10565 c981e94126710ab7bf27321aedade463 488 PANTHER PTHR11699:SF197 1 448 2.8E-292 T 22-04-2016 LK04_RS10565 c981e94126710ab7bf27321aedade463 488 PANTHER PTHR11699 1 448 2.8E-292 T 22-04-2016 LK04_RS10565 c981e94126710ab7bf27321aedade463 488 SUPERFAMILY SSF53720 2 451 4.97E-125 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS10565 c981e94126710ab7bf27321aedade463 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 266 277 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LK04_RS10565 c981e94126710ab7bf27321aedade463 488 Gene3D G3DSA:3.40.605.10 3 252 4.6E-75 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS16195 50aaf9192aa88bd505b90e0f5bb86b3d 201 Gene3D G3DSA:3.40.50.360 1 200 9.5E-54 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS16195 50aaf9192aa88bd505b90e0f5bb86b3d 201 PANTHER PTHR10204 1 200 1.3E-40 T 22-04-2016 LK04_RS16195 50aaf9192aa88bd505b90e0f5bb86b3d 201 PANTHER PTHR10204:SF16 1 200 1.3E-40 T 22-04-2016 LK04_RS16195 50aaf9192aa88bd505b90e0f5bb86b3d 201 Pfam PF02525 Flavodoxin-like fold 1 199 3.4E-43 T 22-04-2016 IPR003680 Flavodoxin-like fold LK04_RS16195 50aaf9192aa88bd505b90e0f5bb86b3d 201 SUPERFAMILY SSF52218 1 201 5.0E-50 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS16195 50aaf9192aa88bd505b90e0f5bb86b3d 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 201 28.048 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 LK04_RS18605 670f44da12b1264beda970aaa9ef23a2 462 Pfam PF01979 Amidohydrolase family 51 438 5.4E-25 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LK04_RS18605 670f44da12b1264beda970aaa9ef23a2 462 SUPERFAMILY SSF51338 1 54 1.27E-29 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS18605 670f44da12b1264beda970aaa9ef23a2 462 SUPERFAMILY SSF51338 384 455 1.27E-29 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS18605 670f44da12b1264beda970aaa9ef23a2 462 PANTHER PTHR11647 4 456 1.5E-113 T 22-04-2016 LK04_RS18605 670f44da12b1264beda970aaa9ef23a2 462 Gene3D G3DSA:2.30.40.10 4 60 1.4E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS18605 670f44da12b1264beda970aaa9ef23a2 462 Gene3D G3DSA:3.20.20.140 61 378 1.5E-85 T 22-04-2016 LK04_RS18605 670f44da12b1264beda970aaa9ef23a2 462 SUPERFAMILY SSF51556 55 384 5.11E-82 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS18605 670f44da12b1264beda970aaa9ef23a2 462 Gene3D G3DSA:2.30.40.10 379 458 3.5E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS01050 3d036edb454722ec7a380ac29a16895e 157 PANTHER PTHR38692:SF1 1 157 3.2E-84 T 22-04-2016 LK04_RS01050 3d036edb454722ec7a380ac29a16895e 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.517 T 22-04-2016 IPR007456 Smg LK04_RS01050 3d036edb454722ec7a380ac29a16895e 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 3.6E-60 T 22-04-2016 IPR007456 Smg LK04_RS01050 3d036edb454722ec7a380ac29a16895e 157 PANTHER PTHR38692 1 157 3.2E-84 T 22-04-2016 LK04_RS03760 d8d629f0b73de0af6cdd5b8e6bc34eb2 234 PANTHER PTHR21392 1 232 1.1E-121 T 22-04-2016 LK04_RS03760 d8d629f0b73de0af6cdd5b8e6bc34eb2 234 PANTHER PTHR21392:SF1 1 232 1.1E-121 T 22-04-2016 LK04_RS03760 d8d629f0b73de0af6cdd5b8e6bc34eb2 234 SMART SM01144 27 219 1.9E-76 T 22-04-2016 IPR005636 DTW LK04_RS03760 d8d629f0b73de0af6cdd5b8e6bc34eb2 234 Pfam PF03942 DTW domain 30 212 5.2E-44 T 22-04-2016 IPR005636 DTW LK04_RS11920 633bf561a16467e1f336ba1429725401 336 PIRSF PIRSF000164 12 336 3.7E-97 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 LK04_RS11920 633bf561a16467e1f336ba1429725401 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 7.6E-91 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 LK04_RS11920 633bf561a16467e1f336ba1429725401 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 LK04_RS11920 633bf561a16467e1f336ba1429725401 336 Gene3D G3DSA:3.20.20.70 1 336 1.8E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS11920 633bf561a16467e1f336ba1429725401 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.6E-154 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS11920 633bf561a16467e1f336ba1429725401 336 PANTHER PTHR11938 6 332 9.2E-103 T 22-04-2016 LK04_RS11920 633bf561a16467e1f336ba1429725401 336 SUPERFAMILY SSF51395 1 335 4.03E-104 T 22-04-2016 LK04_RS11920 633bf561a16467e1f336ba1429725401 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 LK04_RS11920 633bf561a16467e1f336ba1429725401 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 52.085 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS07900 aa4553073f94aaf076c61f4ea273e391 219 PANTHER PTHR11820 16 213 4.6E-87 T 22-04-2016 LK04_RS07900 aa4553073f94aaf076c61f4ea273e391 219 Gene3D G3DSA:3.90.850.10 14 214 7.6E-79 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LK04_RS07900 aa4553073f94aaf076c61f4ea273e391 219 SUPERFAMILY SSF56529 11 216 1.83E-70 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LK04_RS07900 aa4553073f94aaf076c61f4ea273e391 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 214 3.1E-53 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LK04_RS08800 e986db4c4e21dfb6b3085489eb8f2980 681 Gene3D G3DSA:1.10.1370.10 147 353 2.0E-108 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LK04_RS08800 e986db4c4e21dfb6b3085489eb8f2980 681 Gene3D G3DSA:1.10.1370.10 506 680 2.0E-108 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LK04_RS08800 e986db4c4e21dfb6b3085489eb8f2980 681 PANTHER PTHR11804:SF47 5 680 0.0 T 22-04-2016 LK04_RS08800 e986db4c4e21dfb6b3085489eb8f2980 681 Gene3D G3DSA:1.20.1050.40 13 144 1.8E-19 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal LK04_RS08800 e986db4c4e21dfb6b3085489eb8f2980 681 PANTHER PTHR11804 5 680 0.0 T 22-04-2016 LK04_RS08800 e986db4c4e21dfb6b3085489eb8f2980 681 SUPERFAMILY SSF55486 14 679 3.43E-165 T 22-04-2016 LK04_RS08800 e986db4c4e21dfb6b3085489eb8f2980 681 Gene3D G3DSA:3.40.390.10 363 505 5.8E-52 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LK04_RS08800 e986db4c4e21dfb6b3085489eb8f2980 681 Pfam PF01432 Peptidase family M3 231 679 4.0E-135 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.1E-46 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.1E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Pfam PF00679 Elongation factor G C-terminus 606 691 9.8E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 SUPERFAMILY SSF54980 407 485 6.47E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Gene3D G3DSA:2.40.30.10 310 409 2.7E-38 T 22-04-2016 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 SUPERFAMILY SSF54980 609 694 2.73E-28 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 108.13 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Gene3D G3DSA:3.30.70.240 605 691 1.4E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Gene3D G3DSA:3.30.230.10 489 604 4.3E-49 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Pfam PF14492 Elongation Factor G, domain II 409 482 2.6E-35 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.3E-66 T 22-04-2016 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Gene3D G3DSA:3.30.70.870 410 485 1.5E-38 T 22-04-2016 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PANTHER PTHR23115 3 184 0.0 T 22-04-2016 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PANTHER PTHR23115 308 697 0.0 T 22-04-2016 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 SUPERFAMILY SSF54211 484 605 5.56E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 SMART SM00889 485 604 1.8E-70 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 Gene3D G3DSA:3.40.50.300 7 293 3.3E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 SUPERFAMILY SSF52540 6 288 1.03E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 SUPERFAMILY SSF50447 259 281 4.2E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 SUPERFAMILY SSF50447 310 407 4.2E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 SMART SM00838 606 693 4.9E-54 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 183 5.2E-31 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PANTHER PTHR23115:SF66 3 184 0.0 T 22-04-2016 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PANTHER PTHR23115:SF66 308 697 0.0 T 22-04-2016 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 LK04_RS06385 3a0bd0fe7e880e546f23f08ecf71580f 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 697 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 LK04_RS02170 d063f1fafa205a9c05e79275b73db708 204 PANTHER PTHR36448:SF2 35 198 5.3E-48 T 22-04-2016 LK04_RS02170 d063f1fafa205a9c05e79275b73db708 204 Pfam PF07883 Cupin domain 89 141 6.5E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel LK04_RS02170 d063f1fafa205a9c05e79275b73db708 204 PANTHER PTHR36448 35 198 5.3E-48 T 22-04-2016 LK04_RS02170 d063f1fafa205a9c05e79275b73db708 204 PIRSF PIRSF019307 20 196 3.9E-50 T 22-04-2016 IPR014500 Uncharacterised conserved protein UCP019307, cupin-type LK04_RS02170 d063f1fafa205a9c05e79275b73db708 204 Gene3D G3DSA:2.60.120.10 66 161 5.6E-19 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS02170 d063f1fafa205a9c05e79275b73db708 204 SUPERFAMILY SSF51182 57 153 1.0E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS10275 0fa138f4b6cc5322506654df698c3309 110 PIRSF PIRSF005894 1 107 1.0E-50 T 22-04-2016 IPR014434 Monothiol glutaredoxin LK04_RS10275 0fa138f4b6cc5322506654df698c3309 110 PANTHER PTHR10293 5 110 4.1E-57 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related LK04_RS10275 0fa138f4b6cc5322506654df698c3309 110 Gene3D G3DSA:3.40.30.10 7 101 9.7E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS10275 0fa138f4b6cc5322506654df698c3309 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.3E-45 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related LK04_RS10275 0fa138f4b6cc5322506654df698c3309 110 SUPERFAMILY SSF52833 2 101 1.02E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS10275 0fa138f4b6cc5322506654df698c3309 110 Pfam PF00462 Glutaredoxin 16 80 1.8E-18 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 Gene3D G3DSA:1.10.8.60 316 415 5.7E-38 T 22-04-2016 LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 5.6E-17 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 6.7E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 Gene3D G3DSA:3.40.50.300 294 311 5.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 Gene3D G3DSA:3.40.50.300 66 253 5.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 22-04-2016 LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.601 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 7.7E-215 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 PANTHER PTHR11262 10 413 8.5E-257 T 22-04-2016 LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 SMART SM00994 12 51 1.0E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 3.0E-21 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 SMART SM00382 111 333 4.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 SUPERFAMILY SSF52540 64 403 2.59E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13975 0df49fc21f7d175828e1a241edd6b73d 423 SMART SM01086 317 412 7.1E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS04485 66d7a7a26b4e60388f7f2768dd36f1b5 90 Pfam PF07338 Protein of unknown function (DUF1471) 34 90 5.7E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS04485 66d7a7a26b4e60388f7f2768dd36f1b5 90 PANTHER PTHR34156 2 90 2.0E-27 T 22-04-2016 LK04_RS04485 66d7a7a26b4e60388f7f2768dd36f1b5 90 SUPERFAMILY SSF159871 5 90 4.32E-25 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS04485 66d7a7a26b4e60388f7f2768dd36f1b5 90 Gene3D G3DSA:3.30.1660.10 18 90 4.8E-24 T 22-04-2016 IPR025543 Dodecin-like LK04_RS03045 7dc4a68f10292dbf1ed328ae5eebf923 383 Gene3D G3DSA:3.30.420.10 138 299 7.3E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS03045 7dc4a68f10292dbf1ed328ae5eebf923 383 Gene3D G3DSA:1.10.10.60 17 60 2.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS03045 7dc4a68f10292dbf1ed328ae5eebf923 383 Pfam PF13565 Homeodomain-like domain 38 114 1.5E-11 T 22-04-2016 LK04_RS03045 7dc4a68f10292dbf1ed328ae5eebf923 383 SUPERFAMILY SSF53098 138 305 2.78E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS03045 7dc4a68f10292dbf1ed328ae5eebf923 383 SUPERFAMILY SSF46689 10 118 1.58E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS03045 7dc4a68f10292dbf1ed328ae5eebf923 383 Pfam PF00665 Integrase core domain 140 259 1.7E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS00510 7dc4a68f10292dbf1ed328ae5eebf923 383 Gene3D G3DSA:3.30.420.10 138 299 7.3E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS00510 7dc4a68f10292dbf1ed328ae5eebf923 383 Gene3D G3DSA:1.10.10.60 17 60 2.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00510 7dc4a68f10292dbf1ed328ae5eebf923 383 Pfam PF13565 Homeodomain-like domain 38 114 1.5E-11 T 22-04-2016 LK04_RS00510 7dc4a68f10292dbf1ed328ae5eebf923 383 SUPERFAMILY SSF53098 138 305 2.78E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS00510 7dc4a68f10292dbf1ed328ae5eebf923 383 SUPERFAMILY SSF46689 10 118 1.58E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00510 7dc4a68f10292dbf1ed328ae5eebf923 383 Pfam PF00665 Integrase core domain 140 259 1.7E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS02225 7dc4a68f10292dbf1ed328ae5eebf923 383 Gene3D G3DSA:3.30.420.10 138 299 7.3E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS02225 7dc4a68f10292dbf1ed328ae5eebf923 383 Gene3D G3DSA:1.10.10.60 17 60 2.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02225 7dc4a68f10292dbf1ed328ae5eebf923 383 Pfam PF13565 Homeodomain-like domain 38 114 1.5E-11 T 22-04-2016 LK04_RS02225 7dc4a68f10292dbf1ed328ae5eebf923 383 SUPERFAMILY SSF53098 138 305 2.78E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS02225 7dc4a68f10292dbf1ed328ae5eebf923 383 SUPERFAMILY SSF46689 10 118 1.58E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02225 7dc4a68f10292dbf1ed328ae5eebf923 383 Pfam PF00665 Integrase core domain 140 259 1.7E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 SUPERFAMILY SSF52540 3 228 1.74E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 SUPERFAMILY SSF52540 255 481 1.74E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 SMART SM00382 28 224 4.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 SMART SM00382 276 471 0.15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 PANTHER PTHR24220 5 376 1.8E-143 T 22-04-2016 LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 PANTHER PTHR24220:SF416 5 376 1.8E-143 T 22-04-2016 LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 Pfam PF00005 ABC transporter 268 422 5.3E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 Pfam PF00005 ABC transporter 19 168 1.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 Gene3D G3DSA:3.40.50.300 253 484 2.8E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08910 ab9fef5e1fff4adb154e2577ce865bf8 493 Gene3D G3DSA:3.40.50.300 3 232 1.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 Gene3D G3DSA:1.20.1600.10 142 314 5.3E-103 T 22-04-2016 LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 Gene3D G3DSA:1.20.1600.10 51 88 5.3E-103 T 22-04-2016 LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 Gene3D G3DSA:1.20.1600.10 352 466 5.3E-103 T 22-04-2016 LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 PANTHER PTHR30203:SF15 7 467 3.8E-158 T 22-04-2016 LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 SUPERFAMILY SSF56954 6 466 1.44E-113 T 22-04-2016 LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 Gene3D G3DSA:2.20.200.10 98 141 1.3E-21 T 22-04-2016 LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 Gene3D G3DSA:2.20.200.10 315 350 1.3E-21 T 22-04-2016 LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 Pfam PF02321 Outer membrane efflux protein 284 463 1.2E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 Pfam PF02321 Outer membrane efflux protein 63 254 1.5E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 PANTHER PTHR30203 7 467 3.8E-158 T 22-04-2016 LK04_RS03145 6edfa6d716b47232590825a1e64ddade 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 465 1.3E-121 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LK04_RS19835 9f7504f797bfd04c71c02f1decd9dfa8 496 PANTHER PTHR11751 94 474 1.7E-114 T 22-04-2016 LK04_RS19835 9f7504f797bfd04c71c02f1decd9dfa8 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 5.3E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS19835 9f7504f797bfd04c71c02f1decd9dfa8 496 Gene3D G3DSA:1.10.10.10 5 75 9.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19835 9f7504f797bfd04c71c02f1decd9dfa8 496 SUPERFAMILY SSF53383 102 470 6.6E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS19835 9f7504f797bfd04c71c02f1decd9dfa8 496 PANTHER PTHR11751:SF314 94 474 1.7E-114 T 22-04-2016 LK04_RS19835 9f7504f797bfd04c71c02f1decd9dfa8 496 SMART SM00345 15 74 2.8E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS19835 9f7504f797bfd04c71c02f1decd9dfa8 496 Pfam PF00155 Aminotransferase class I and II 127 457 1.5E-25 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS19835 9f7504f797bfd04c71c02f1decd9dfa8 496 SUPERFAMILY SSF46785 5 77 1.44E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19835 9f7504f797bfd04c71c02f1decd9dfa8 496 Gene3D G3DSA:3.40.640.10 143 367 1.7E-59 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS03920 3dc0bdb9c27cdda4c2a2bf43420603b2 284 SUPERFAMILY SSF56112 19 212 5.91E-19 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS03920 3dc0bdb9c27cdda4c2a2bf43420603b2 284 PANTHER PTHR10593 5 276 3.3E-124 T 22-04-2016 LK04_RS03920 3dc0bdb9c27cdda4c2a2bf43420603b2 284 Pfam PF01163 RIO1 family 30 220 4.5E-41 T 22-04-2016 LK04_RS03920 3dc0bdb9c27cdda4c2a2bf43420603b2 284 PANTHER PTHR10593:SF19 5 276 3.3E-124 T 22-04-2016 LK04_RS03920 3dc0bdb9c27cdda4c2a2bf43420603b2 284 Gene3D G3DSA:3.30.200.20 17 125 1.1E-12 T 22-04-2016 LK04_RS03920 3dc0bdb9c27cdda4c2a2bf43420603b2 284 SMART SM00090 7 231 5.1E-15 T 22-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LK04_RS03920 3dc0bdb9c27cdda4c2a2bf43420603b2 284 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 22-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LK04_RS03920 3dc0bdb9c27cdda4c2a2bf43420603b2 284 Gene3D G3DSA:1.10.510.10 140 215 1.7E-17 T 22-04-2016 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.6E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.6E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.6E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 PANTHER PTHR30204:SF16 1 132 2.2E-74 T 22-04-2016 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 9.1E-58 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 Gene3D G3DSA:1.10.1660.10 56 132 6.1E-25 T 22-04-2016 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 PANTHER PTHR30204 1 132 2.2E-74 T 22-04-2016 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 SUPERFAMILY SSF46955 1 126 1.68E-32 T 22-04-2016 IPR009061 Putative DNA-binding domain LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 Gene3D G3DSA:1.10.1660.10 1 55 4.6E-22 T 22-04-2016 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.2E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS13725 adadb82a57bb6588f5845342e80f9d9b 138 SMART SM00422 1 70 6.5E-25 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS16550 b0dc53556bf81bbf70aeec2e8d7859bd 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.4E-44 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16550 b0dc53556bf81bbf70aeec2e8d7859bd 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 3.0E-38 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 LK04_RS16550 b0dc53556bf81bbf70aeec2e8d7859bd 103 SUPERFAMILY SSF141091 1 101 9.16E-37 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 LK04_RS16550 b0dc53556bf81bbf70aeec2e8d7859bd 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.394 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16550 b0dc53556bf81bbf70aeec2e8d7859bd 103 PANTHER PTHR21349 1 101 1.6E-46 T 22-04-2016 LK04_RS16550 b0dc53556bf81bbf70aeec2e8d7859bd 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 Gene3D G3DSA:1.20.120.160 784 879 3.7E-25 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 SMART SM00387 558 671 6.5E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 PANTHER PTHR26402 139 266 1.1E-74 T 22-04-2016 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 SUPERFAMILY SSF47384 436 511 3.14E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 670 1.3E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 8 880 25.149 T 22-04-2016 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 Pfam PF16359 RcsD-ABL domain 679 781 8.7E-39 T 22-04-2016 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 7.3E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 649 7.3E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 668 7.3E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 Gene3D G3DSA:1.10.287.130 444 507 7.8E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 PANTHER PTHR26402 88 104 1.1E-74 T 22-04-2016 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 Pfam PF01627 Hpt domain 800 858 2.4E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 PANTHER PTHR26402:SF603 139 266 1.1E-74 T 22-04-2016 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 PANTHER PTHR26402:SF603 88 104 1.1E-74 T 22-04-2016 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 SUPERFAMILY SSF47226 796 879 3.14E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 SUPERFAMILY SSF55874 500 671 3.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS05620 d9a2fd4fc35d84763bac00d0eeb45046 885 Gene3D G3DSA:3.30.565.10 517 676 2.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 SUPERFAMILY SSF52402 6 209 8.15E-75 T 22-04-2016 LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 6.1E-65 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 PANTHER PTHR23293 178 211 2.7E-98 T 22-04-2016 LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 PANTHER PTHR23293 245 302 2.7E-98 T 22-04-2016 LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 PANTHER PTHR23293 1 158 2.7E-98 T 22-04-2016 LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 PANTHER PTHR23293:SF6 178 211 2.7E-98 T 22-04-2016 LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 PANTHER PTHR23293:SF6 245 302 2.7E-98 T 22-04-2016 LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 PANTHER PTHR23293:SF6 1 158 2.7E-98 T 22-04-2016 LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.265 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.1E-168 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 Gene3D G3DSA:3.40.50.620 3 210 1.3E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 Gene3D G3DSA:3.40.50.620 244 253 1.3E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS03475 9137bc5afd7883b341a92d82c3697145 302 PIRSF PIRSF002936 1 302 7.5E-156 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 LK04_RS10620 5f8c9467fbaf5ad71d27427cca650792 311 Pfam PF13407 Periplasmic binding protein domain 29 278 5.1E-50 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS10620 5f8c9467fbaf5ad71d27427cca650792 311 SUPERFAMILY SSF53822 27 303 2.02E-68 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS10620 5f8c9467fbaf5ad71d27427cca650792 311 Gene3D G3DSA:3.40.50.2300 26 139 2.0E-30 T 22-04-2016 LK04_RS10620 5f8c9467fbaf5ad71d27427cca650792 311 PANTHER PTHR32196 22 298 3.0E-60 T 22-04-2016 LK04_RS10620 5f8c9467fbaf5ad71d27427cca650792 311 Gene3D G3DSA:3.40.50.2300 140 302 2.6E-42 T 22-04-2016 LK04_RS10620 5f8c9467fbaf5ad71d27427cca650792 311 PANTHER PTHR32196:SF9 22 298 3.0E-60 T 22-04-2016 LK04_RS12705 03d0776596a5fbd1cc82143abfb04407 371 Pfam PF05076 Suppressor of fused protein (SUFU) 198 361 2.3E-24 T 22-04-2016 IPR020941 Suppressor of fused-like domain LK04_RS08175 c513f1ba15f84d8678d4c7bdb6d1bb6c 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.306 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LK04_RS08175 c513f1ba15f84d8678d4c7bdb6d1bb6c 267 Pfam PF00290 Tryptophan synthase alpha chain 8 266 2.3E-97 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LK04_RS08175 c513f1ba15f84d8678d4c7bdb6d1bb6c 267 SUPERFAMILY SSF51366 1 266 8.29E-91 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LK04_RS08175 c513f1ba15f84d8678d4c7bdb6d1bb6c 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LK04_RS08175 c513f1ba15f84d8678d4c7bdb6d1bb6c 267 PANTHER PTHR10314:SF4 10 51 1.2E-28 T 22-04-2016 LK04_RS08175 c513f1ba15f84d8678d4c7bdb6d1bb6c 267 PANTHER PTHR10314:SF4 74 153 1.2E-28 T 22-04-2016 LK04_RS08175 c513f1ba15f84d8678d4c7bdb6d1bb6c 267 Gene3D G3DSA:3.20.20.70 1 266 2.8E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS08175 c513f1ba15f84d8678d4c7bdb6d1bb6c 267 PANTHER PTHR10314 10 51 1.2E-28 T 22-04-2016 LK04_RS08175 c513f1ba15f84d8678d4c7bdb6d1bb6c 267 PANTHER PTHR10314 74 153 1.2E-28 T 22-04-2016 LK04_RS08175 c513f1ba15f84d8678d4c7bdb6d1bb6c 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.6E-106 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LK04_RS14020 0b9da081a775ec9645fd80ae69829a70 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 7.2E-38 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 LK04_RS14020 0b9da081a775ec9645fd80ae69829a70 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 19 92 8.6E-19 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 LK04_RS14020 0b9da081a775ec9645fd80ae69829a70 109 PANTHER PTHR36835 1 109 4.0E-40 T 22-04-2016 LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 Pfam PF07085 DRTGG domain 228 339 8.9E-29 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 PIRSF PIRSF006107 1 709 0.0 T 22-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 PANTHER PTHR23406:SF3 173 708 1.0E-56 T 22-04-2016 LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 SUPERFAMILY SSF53659 387 704 1.64E-93 T 22-04-2016 LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 Pfam PF13500 AAA domain 1 224 2.6E-47 T 22-04-2016 LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 Gene3D G3DSA:3.40.50.300 5 217 1.8E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 SUPERFAMILY SSF75138 224 348 1.12E-24 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 401 701 2.4E-136 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 Pfam PF01515 Phosphate acetyl/butaryl transferase 386 701 2.3E-127 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 SUPERFAMILY SSF52540 1 235 1.49E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 PANTHER PTHR23406 173 708 1.0E-56 T 22-04-2016 LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 Gene3D G3DSA:3.40.50.10750 519 677 5.5E-67 T 22-04-2016 LK04_RS05450 29cc79531ddf76c8a097b1e1839898f7 709 Gene3D G3DSA:3.40.1390.20 220 360 2.9E-30 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like LK04_RS03615 a23676baa2b4bd6e08e19e36cbd3d2f4 188 PANTHER PTHR18901:SF29 1 186 2.2E-66 T 22-04-2016 LK04_RS03615 a23676baa2b4bd6e08e19e36cbd3d2f4 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 183 4.7E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS03615 a23676baa2b4bd6e08e19e36cbd3d2f4 188 Gene3D G3DSA:3.40.50.1000 90 185 2.2E-37 T 22-04-2016 IPR023214 HAD-like domain LK04_RS03615 a23676baa2b4bd6e08e19e36cbd3d2f4 188 Gene3D G3DSA:3.40.50.1000 3 18 2.2E-37 T 22-04-2016 IPR023214 HAD-like domain LK04_RS03615 a23676baa2b4bd6e08e19e36cbd3d2f4 188 PANTHER PTHR18901 1 186 2.2E-66 T 22-04-2016 LK04_RS03615 a23676baa2b4bd6e08e19e36cbd3d2f4 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 184 4.3E-30 T 22-04-2016 IPR023214 HAD-like domain LK04_RS03615 a23676baa2b4bd6e08e19e36cbd3d2f4 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 7.7E-59 T 22-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase LK04_RS03615 a23676baa2b4bd6e08e19e36cbd3d2f4 188 SUPERFAMILY SSF56784 5 185 3.2E-47 T 22-04-2016 IPR023214 HAD-like domain LK04_RS03615 a23676baa2b4bd6e08e19e36cbd3d2f4 188 Gene3D G3DSA:1.10.150.240 19 65 1.0E-5 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 710 244.446 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 SUPERFAMILY SSF46548 336 444 1.59E-19 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 Gene3D G3DSA:1.10.1060.10 329 446 8.5E-19 T 22-04-2016 LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 PANTHER PTHR11780:SF1 1 482 1.7E-242 T 22-04-2016 LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 Pfam PF10531 SLBB domain 296 344 4.9E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 6.5E-178 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 PANTHER PTHR11780 1 482 1.7E-242 T 22-04-2016 LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 3.9E-31 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 Pfam PF12838 4Fe-4S dicluster domain 376 430 2.1E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 SUPERFAMILY SSF142019 94 303 9.15E-60 T 22-04-2016 LK04_RS10125 d7776ebcb021f04be8fbb9c7cfa33113 847 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 2.0E-48 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain LK04_RS08050 0a990f9aa31a7efa92f4acc35f297fc8 151 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 128 26.582 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 LK04_RS08050 0a990f9aa31a7efa92f4acc35f297fc8 151 PANTHER PTHR33747 2 151 9.6E-26 T 22-04-2016 LK04_RS08050 0a990f9aa31a7efa92f4acc35f297fc8 151 Pfam PF02810 SEC-C motif 134 151 2.5E-8 T 22-04-2016 IPR004027 SEC-C motif LK04_RS08050 0a990f9aa31a7efa92f4acc35f297fc8 151 Gene3D G3DSA:3.10.450.50 2 151 1.7E-51 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS08050 0a990f9aa31a7efa92f4acc35f297fc8 151 SUPERFAMILY SSF54427 26 129 2.54E-32 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS08050 0a990f9aa31a7efa92f4acc35f297fc8 151 SUPERFAMILY SSF103642 132 151 2.13E-6 T 22-04-2016 LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 134 6.9E-19 T 22-04-2016 IPR029095 NarX-like, N-terminal LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 SMART SM00304 174 227 4.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 Pfam PF07730 Histidine kinase 360 423 1.5E-18 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 SUPERFAMILY SSF158472 174 224 4.18E-6 T 22-04-2016 LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 467 555 9.3E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 SUPERFAMILY SSF55874 428 554 2.15E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 Pfam PF00672 HAMP domain 155 223 1.0E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 PANTHER PTHR24421:SF25 2 286 1.3E-180 T 22-04-2016 LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 PANTHER PTHR24421:SF25 355 554 1.3E-180 T 22-04-2016 LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 Gene3D G3DSA:3.30.565.10 425 555 3.8E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 SMART SM00387 464 557 1.0E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 PANTHER PTHR24421 2 286 1.3E-180 T 22-04-2016 LK04_RS04480 8058b5f87e762e718415f0eef70ccd2d 562 PANTHER PTHR24421 355 554 1.3E-180 T 22-04-2016 LK04_RS16560 62ef6584ac50a460c275cdd6188547c7 93 SUPERFAMILY SSF47413 2 71 1.15E-30 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS16560 62ef6584ac50a460c275cdd6188547c7 93 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 9.2E-38 T 22-04-2016 LK04_RS16560 62ef6584ac50a460c275cdd6188547c7 93 Gene3D G3DSA:1.10.260.40 2 72 6.0E-40 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 Gene3D G3DSA:3.40.50.300 1 238 2.7E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 19 367 1.9E-104 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 SUPERFAMILY SSF54631 254 368 6.0E-16 T 22-04-2016 LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 PANTHER PTHR24220:SF350 3 292 4.5E-154 T 22-04-2016 LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 SUPERFAMILY SSF52540 1 244 5.02E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 Pfam PF00571 CBS domain 256 305 1.2E-5 T 22-04-2016 IPR000644 CBS domain LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 Pfam PF00571 CBS domain 326 368 0.0075 T 22-04-2016 IPR000644 CBS domain LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 SMART SM00382 31 218 2.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 Gene3D G3DSA:3.10.580.10 253 368 9.8E-20 T 22-04-2016 LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 SMART SM00116 322 368 79.0 T 22-04-2016 IPR000644 CBS domain LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 SMART SM00116 263 311 0.0011 T 22-04-2016 IPR000644 CBS domain LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 PANTHER PTHR24220 3 292 4.5E-154 T 22-04-2016 LK04_RS08735 017d972e859ebf31165376ba5ff745b5 381 Pfam PF00005 ABC transporter 22 168 1.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12590 39bbf49594d9b5f8196a2154328ea317 361 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LK04_RS12590 39bbf49594d9b5f8196a2154328ea317 361 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 346 1.1E-48 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 LK04_RS12590 39bbf49594d9b5f8196a2154328ea317 361 PANTHER PTHR11496:SF57 9 360 1.6E-51 T 22-04-2016 LK04_RS12590 39bbf49594d9b5f8196a2154328ea317 361 SUPERFAMILY SSF56796 3 353 3.93E-62 T 22-04-2016 LK04_RS12590 39bbf49594d9b5f8196a2154328ea317 361 PANTHER PTHR11496 9 360 1.6E-51 T 22-04-2016 LK04_RS12590 39bbf49594d9b5f8196a2154328ea317 361 Gene3D G3DSA:1.20.1090.10 162 355 2.1E-35 T 22-04-2016 LK04_RS12590 39bbf49594d9b5f8196a2154328ea317 361 PIRSF PIRSF000112 1 359 4.7E-73 T 22-04-2016 LK04_RS12590 39bbf49594d9b5f8196a2154328ea317 361 Gene3D G3DSA:3.40.50.1970 2 160 2.6E-39 T 22-04-2016 LK04_RS15555 a19ed5baf0556cf21aeaf5e75cf3a1c8 274 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 56.036 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 LK04_RS15555 a19ed5baf0556cf21aeaf5e75cf3a1c8 274 Gene3D G3DSA:3.40.50.150 6 199 2.6E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS15555 a19ed5baf0556cf21aeaf5e75cf3a1c8 274 SMART SM00650 25 198 1.7E-84 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 LK04_RS15555 a19ed5baf0556cf21aeaf5e75cf3a1c8 274 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 1.9E-79 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LK04_RS15555 a19ed5baf0556cf21aeaf5e75cf3a1c8 274 PANTHER PTHR11727 1 264 3.3E-100 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LK04_RS15555 a19ed5baf0556cf21aeaf5e75cf3a1c8 274 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 264 4.9E-88 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 LK04_RS15555 a19ed5baf0556cf21aeaf5e75cf3a1c8 274 Gene3D G3DSA:1.10.8.100 201 265 1.3E-22 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like LK04_RS15555 a19ed5baf0556cf21aeaf5e75cf3a1c8 274 SUPERFAMILY SSF53335 17 266 4.85E-77 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS15555 a19ed5baf0556cf21aeaf5e75cf3a1c8 274 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 LK04_RS17195 c4e63492cd785396d9a72d8b59f8ad22 141 PANTHER PTHR33931 8 138 1.0E-57 T 22-04-2016 LK04_RS17195 c4e63492cd785396d9a72d8b59f8ad22 141 PANTHER PTHR33931:SF3 8 138 1.0E-57 T 22-04-2016 LK04_RS17195 c4e63492cd785396d9a72d8b59f8ad22 141 Pfam PF03788 LrgA family 32 122 7.4E-29 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 6.7E-40 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 9.9E-43 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 PANTHER PTHR30560 1 430 4.4E-147 T 22-04-2016 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 Gene3D G3DSA:1.10.3120.10 214 388 5.5E-62 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 Gene3D G3DSA:3.10.50.40 143 213 4.3E-8 T 22-04-2016 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 Hamap MF_00303 Trigger factor [tig]. 1 418 22.009 T 22-04-2016 IPR005215 Trigger factor GO:0015031 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 SUPERFAMILY SSF54534 96 241 3.34E-36 T 22-04-2016 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 SUPERFAMILY SSF102735 1 131 7.59E-39 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 PIRSF PIRSF003095 1 434 5.5E-130 T 22-04-2016 IPR005215 Trigger factor GO:0015031 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 6.4E-142 T 22-04-2016 IPR005215 Trigger factor GO:0015031 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 SUPERFAMILY SSF109998 248 429 8.5E-48 T 22-04-2016 IPR027304 Trigger factor/SurA domain LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 Gene3D G3DSA:3.30.70.1050 1 118 3.1E-39 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 PANTHER PTHR30560:SF3 1 430 4.4E-147 T 22-04-2016 LK04_RS13985 ebdce54e6621a2132fd35b0c553a0977 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 237 1.1E-13 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LK04_RS00360 645e96637254cd4a0dd30a842adb47e2 231 Pfam PF00857 Isochorismatase family 50 222 1.7E-42 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS00360 645e96637254cd4a0dd30a842adb47e2 231 SUPERFAMILY SSF52499 29 228 3.92E-57 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS00360 645e96637254cd4a0dd30a842adb47e2 231 PANTHER PTHR11080 24 228 1.9E-49 T 22-04-2016 LK04_RS00360 645e96637254cd4a0dd30a842adb47e2 231 Gene3D G3DSA:3.40.50.850 24 227 3.9E-58 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS00360 645e96637254cd4a0dd30a842adb47e2 231 PANTHER PTHR11080:SF17 24 228 1.9E-49 T 22-04-2016 LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 PANTHER PTHR11760:SF19 2 232 7.4E-150 T 22-04-2016 LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 PANTHER PTHR11760 2 232 7.4E-150 T 22-04-2016 LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 SUPERFAMILY SSF54814 2 106 1.28E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 Gene3D G3DSA:3.30.300.20 18 107 6.8E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 Pfam PF07650 KH domain 38 111 2.8E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.283 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 Gene3D G3DSA:3.30.1140.32 108 207 5.9E-48 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-41 T 22-04-2016 LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 SMART SM00322 60 125 3.2E-7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 LK04_RS00900 f6acdf4c2b97a156e961ee538a5a972b 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.1E-100 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 LK04_RS08730 5e2183f6de1b499fa62d057ef41c1520 456 TIGRFAM TIGR03173 pbuX: xanthine permease 25 440 3.7E-131 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 LK04_RS08730 5e2183f6de1b499fa62d057ef41c1520 456 PANTHER PTHR11119 8 446 7.4E-175 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS08730 5e2183f6de1b499fa62d057ef41c1520 456 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 20 438 5.5E-112 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LK04_RS08730 5e2183f6de1b499fa62d057ef41c1520 456 PANTHER PTHR11119:SF44 8 446 7.4E-175 T 22-04-2016 LK04_RS08730 5e2183f6de1b499fa62d057ef41c1520 456 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 356 376 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LK04_RS08730 5e2183f6de1b499fa62d057ef41c1520 456 Pfam PF00860 Permease family 21 408 2.8E-89 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 Gene3D G3DSA:3.30.230.10 220 392 1.0E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.2E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.2E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.2E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.2E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.2E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR00418 DNA topoisomerase II family signature 734 750 1.2E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.2E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.2E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.2E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 Gene3D G3DSA:3.30.565.10 15 218 7.3E-92 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 Pfam PF01751 Toprim domain 419 531 6.1E-18 T 22-04-2016 IPR006171 Toprim domain LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PANTHER PTHR10169 1 553 0.0 T 22-04-2016 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PANTHER PTHR10169 722 802 0.0 T 22-04-2016 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR01159 DNA gyrase subunit B signature 181 196 3.6E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR01159 DNA gyrase subunit B signature 312 328 3.6E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR01159 DNA gyrase subunit B signature 220 242 3.6E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR01159 DNA gyrase subunit B signature 755 767 3.6E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR01159 DNA gyrase subunit B signature 771 787 3.6E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR01159 DNA gyrase subunit B signature 5 15 3.6E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR01159 DNA gyrase subunit B signature 196 209 3.6E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR01159 DNA gyrase subunit B signature 470 479 3.6E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR01159 DNA gyrase subunit B signature 360 374 3.6E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 PRINTS PR01159 DNA gyrase subunit B signature 374 394 3.6E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 Pfam PF00204 DNA gyrase B 221 390 2.1E-59 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 SUPERFAMILY SSF56719 728 793 2.3E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 SUPERFAMILY SSF56719 394 560 2.3E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 1.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 Gene3D G3DSA:3.40.50.670 404 550 1.9E-101 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 Gene3D G3DSA:3.40.50.670 716 784 1.9E-101 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 SMART SM00433 35 795 4.6E-280 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 802 0.0 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 SMART SM00387 31 175 3.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 SUPERFAMILY SSF55874 4 220 1.3E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 SUPERFAMILY SSF54211 221 392 8.72E-62 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 802 111.928 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS18775 459a8d3d04a4057eb420de376b30698e 802 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 730 791 3.0E-30 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 Gene3D G3DSA:1.10.760.10 315 419 3.1E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 PANTHER PTHR35008 11 417 2.0E-189 T 22-04-2016 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 PANTHER PTHR35008:SF3 11 417 2.0E-189 T 22-04-2016 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 SUPERFAMILY SSF46626 175 288 3.97E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 PIRSF PIRSF000018 2 426 3.2E-167 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 Pfam PF00034 Cytochrome c 33 131 9.3E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 Pfam PF00034 Cytochrome c 180 288 2.2E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 Pfam PF00034 Cytochrome c 314 399 3.1E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 SUPERFAMILY SSF46626 23 157 3.07E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 PRINTS PR00605 Class IC cytochrome C signature 322 333 5.3E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 PRINTS PR00605 Class IC cytochrome C signature 375 397 5.3E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 SUPERFAMILY SSF46626 316 420 4.44E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 Gene3D G3DSA:1.10.760.10 29 131 4.7E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS12450 b00a3506038189a03894fbf3b2739713 426 Gene3D G3DSA:1.10.760.10 175 288 2.3E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS02355 6f5589d6aa08bbacae8c515314fab19a 332 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 70 8.5E-7 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LK04_RS02355 6f5589d6aa08bbacae8c515314fab19a 332 Pfam PF01418 Helix-turn-helix domain, rpiR family 83 151 1.0E-12 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LK04_RS02355 6f5589d6aa08bbacae8c515314fab19a 332 SUPERFAMILY SSF46689 81 150 6.27E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02355 6f5589d6aa08bbacae8c515314fab19a 332 PANTHER PTHR30514:SF1 36 297 9.0E-23 T 22-04-2016 LK04_RS02355 6f5589d6aa08bbacae8c515314fab19a 332 PANTHER PTHR30514 36 297 9.0E-23 T 22-04-2016 LK04_RS02355 6f5589d6aa08bbacae8c515314fab19a 332 SUPERFAMILY SSF53697 167 306 2.2E-8 T 22-04-2016 LK04_RS02355 6f5589d6aa08bbacae8c515314fab19a 332 Gene3D G3DSA:3.40.50.10490 141 300 4.4E-8 T 22-04-2016 LK04_RS02355 6f5589d6aa08bbacae8c515314fab19a 332 SUPERFAMILY SSF46689 1 73 4.48E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02355 6f5589d6aa08bbacae8c515314fab19a 332 Gene3D G3DSA:1.10.10.10 80 140 3.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02355 6f5589d6aa08bbacae8c515314fab19a 332 Gene3D G3DSA:1.10.10.10 1 75 1.9E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15620 1e4e060f8ff24da94e3ff1395464cb3c 87 Pfam PF01649 Ribosomal protein S20 2 83 1.4E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS15620 1e4e060f8ff24da94e3ff1395464cb3c 87 SUPERFAMILY SSF46992 3 86 4.19E-30 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS15620 1e4e060f8ff24da94e3ff1395464cb3c 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.5E-33 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS15620 1e4e060f8ff24da94e3ff1395464cb3c 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 86 6.0E-31 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS15620 1e4e060f8ff24da94e3ff1395464cb3c 87 PANTHER PTHR33398 2 87 6.3E-38 T 22-04-2016 LK04_RS15620 1e4e060f8ff24da94e3ff1395464cb3c 87 Gene3D G3DSA:1.20.58.110 3 87 1.1E-30 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS15620 1e4e060f8ff24da94e3ff1395464cb3c 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.003 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS18175 52932eb90a53cd43d4f4e822a57c5505 374 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 6.4E-168 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 LK04_RS18175 52932eb90a53cd43d4f4e822a57c5505 374 Gene3D G3DSA:3.40.50.2000 211 372 2.0E-66 T 22-04-2016 LK04_RS18175 52932eb90a53cd43d4f4e822a57c5505 374 Gene3D G3DSA:3.40.50.2000 2 210 4.6E-89 T 22-04-2016 LK04_RS18175 52932eb90a53cd43d4f4e822a57c5505 374 PANTHER PTHR18964:SF2 1 372 1.1E-211 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 LK04_RS18175 52932eb90a53cd43d4f4e822a57c5505 374 SUPERFAMILY SSF53756 2 372 6.28E-141 T 22-04-2016 LK04_RS18175 52932eb90a53cd43d4f4e822a57c5505 374 PANTHER PTHR18964 1 372 1.1E-211 T 22-04-2016 LK04_RS18175 52932eb90a53cd43d4f4e822a57c5505 374 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 2.8E-125 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain LK04_RS18175 52932eb90a53cd43d4f4e822a57c5505 374 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 66.144 T 22-04-2016 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|UniPathway: UPA00566 LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 254 294 1.9E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 547 580 1.7E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 ProSitePatterns PS00211 ABC transporters family signature. 175 189 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 Pfam PF00005 ABC transporter 39 202 1.8E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 Pfam PF00005 ABC transporter 344 495 1.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 SUPERFAMILY SSF52540 20 274 2.09E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 PANTHER PTHR24220:SF442 343 453 3.0E-158 T 22-04-2016 LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 PANTHER PTHR24220:SF442 21 311 3.0E-158 T 22-04-2016 LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 SUPERFAMILY SSF52540 316 567 4.89E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 SMART SM00382 48 252 1.7E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 SMART SM00382 352 545 9.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 Gene3D G3DSA:3.40.50.300 315 569 5.4E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 Gene3D G3DSA:3.40.50.300 18 276 2.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 PANTHER PTHR24220 343 453 3.0E-158 T 22-04-2016 LK04_RS19880 8be2e3cd46b232f24bd3a97ecf6491ae 621 PANTHER PTHR24220 21 311 3.0E-158 T 22-04-2016 LK04_RS14125 99fb7da6fa271363d21a69663de889bd 187 Gene3D G3DSA:2.60.40.1620 46 178 1.3E-53 T 22-04-2016 IPR021658 Domain of unknown function DUF3251 LK04_RS14125 99fb7da6fa271363d21a69663de889bd 187 Pfam PF11622 Protein of unknown function (DUF3251) 28 179 7.7E-52 T 22-04-2016 IPR021658 Domain of unknown function DUF3251 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 Gene3D G3DSA:3.40.449.10 21 226 1.4E-86 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 PANTHER PTHR30031 7 539 0.0 T 22-04-2016 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 PANTHER PTHR30031:SF0 7 539 0.0 T 22-04-2016 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 SUPERFAMILY SSF53795 228 539 2.98E-126 T 22-04-2016 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 15 539 54.567 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 SUPERFAMILY SSF68923 8 226 1.5E-89 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 490 5.0E-211 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 6 539 2.6E-270 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 Gene3D G3DSA:3.90.228.20 350 538 1.0E-120 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 Gene3D G3DSA:3.90.228.20 228 289 1.0E-120 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 LK04_RS00575 50f2b4d2bd212c13260f4fa3b2f4396a 539 PIRSF PIRSF006294 2 539 3.0E-228 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 LK04_RS09715 e0693e8d995b2f314ba3bf3565737aa5 341 SUPERFAMILY SSF47413 5 63 2.44E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS09715 e0693e8d995b2f314ba3bf3565737aa5 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 2.1E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS09715 e0693e8d995b2f314ba3bf3565737aa5 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS09715 e0693e8d995b2f314ba3bf3565737aa5 341 SMART SM00354 5 75 4.1E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS09715 e0693e8d995b2f314ba3bf3565737aa5 341 Gene3D G3DSA:3.40.50.2300 177 323 2.2E-36 T 22-04-2016 LK04_RS09715 e0693e8d995b2f314ba3bf3565737aa5 341 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 334 1.2E-55 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LK04_RS09715 e0693e8d995b2f314ba3bf3565737aa5 341 Gene3D G3DSA:1.10.260.40 6 57 2.4E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS09715 e0693e8d995b2f314ba3bf3565737aa5 341 PANTHER PTHR30146 5 339 6.1E-79 T 22-04-2016 LK04_RS09715 e0693e8d995b2f314ba3bf3565737aa5 341 Gene3D G3DSA:3.40.50.2300 58 176 5.8E-33 T 22-04-2016 LK04_RS09715 e0693e8d995b2f314ba3bf3565737aa5 341 SUPERFAMILY SSF53822 65 338 3.37E-48 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS00745 7868e536b47d1147c1720571f91197b3 338 Pfam PF00561 alpha/beta hydrolase fold 74 313 3.6E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS00745 7868e536b47d1147c1720571f91197b3 338 Gene3D G3DSA:3.40.50.1820 57 185 1.7E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS00745 7868e536b47d1147c1720571f91197b3 338 Gene3D G3DSA:3.40.50.1820 261 336 1.7E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS00745 7868e536b47d1147c1720571f91197b3 338 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 240 281 - T 22-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- LK04_RS00745 7868e536b47d1147c1720571f91197b3 338 PANTHER PTHR10794 17 337 4.1E-87 T 22-04-2016 LK04_RS00745 7868e536b47d1147c1720571f91197b3 338 PANTHER PTHR10794:SF46 17 337 4.1E-87 T 22-04-2016 LK04_RS00745 7868e536b47d1147c1720571f91197b3 338 PIRSF PIRSF005211 10 338 1.3E-102 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- LK04_RS00745 7868e536b47d1147c1720571f91197b3 338 SUPERFAMILY SSF53474 40 313 1.16E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 PANTHER PTHR30579:SF4 6 299 6.0E-206 T 22-04-2016 LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 SUPERFAMILY SSF46785 11 119 2.13E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 Pfam PF03466 LysR substrate binding domain 97 278 1.7E-28 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 SUPERFAMILY SSF53850 96 286 9.37E-30 T 22-04-2016 LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 PANTHER PTHR30579 6 299 6.0E-206 T 22-04-2016 LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 Gene3D G3DSA:3.40.190.10 97 190 4.0E-16 T 22-04-2016 LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 6.9E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 Gene3D G3DSA:3.40.190.10 191 246 5.5E-11 T 22-04-2016 LK04_RS05485 ef9cb334195a362c4a5158f0157d6082 307 Gene3D G3DSA:1.10.10.10 10 90 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09255 455d5710669a0e21272cea1a1a30438f 183 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 27 176 1.4E-15 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein LK04_RS09255 455d5710669a0e21272cea1a1a30438f 183 Pfam PF04965 Gene 25-like lysozyme 54 156 8.5E-19 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD LK04_RS09255 455d5710669a0e21272cea1a1a30438f 183 PANTHER PTHR38595 17 178 1.6E-33 T 22-04-2016 LK04_RS09255 455d5710669a0e21272cea1a1a30438f 183 SUPERFAMILY SSF160719 54 170 6.67E-9 T 22-04-2016 LK04_RS12100 3283a93d80642f72cbef6894a9ea543d 286 PANTHER PTHR30520 245 285 6.3E-97 T 22-04-2016 LK04_RS12100 3283a93d80642f72cbef6894a9ea543d 286 PANTHER PTHR30520:SF0 245 285 6.3E-97 T 22-04-2016 LK04_RS12100 3283a93d80642f72cbef6894a9ea543d 286 PANTHER PTHR30520:SF0 2 228 6.3E-97 T 22-04-2016 LK04_RS12100 3283a93d80642f72cbef6894a9ea543d 286 Pfam PF01226 Formate/nitrite transporter 15 276 1.8E-73 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LK04_RS12100 3283a93d80642f72cbef6894a9ea543d 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site LK04_RS12100 3283a93d80642f72cbef6894a9ea543d 286 PANTHER PTHR30520 2 228 6.3E-97 T 22-04-2016 LK04_RS12100 3283a93d80642f72cbef6894a9ea543d 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 4.5E-122 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 LK04_RS12100 3283a93d80642f72cbef6894a9ea543d 286 Gene3D G3DSA:1.20.1080.10 30 280 8.9E-87 T 22-04-2016 IPR023271 Aquaporin-like LK04_RS12100 3283a93d80642f72cbef6894a9ea543d 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 2.0E-90 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LK04_RS12100 3283a93d80642f72cbef6894a9ea543d 286 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site LK04_RS10235 4008961a77e533a47c7a9fc25ebaebc6 172 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 65 75 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 LK04_RS10235 4008961a77e533a47c7a9fc25ebaebc6 172 SUPERFAMILY SSF49329 24 172 3.27E-46 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS10235 4008961a77e533a47c7a9fc25ebaebc6 172 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 35 172 3.6E-30 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS10235 4008961a77e533a47c7a9fc25ebaebc6 172 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 LK04_RS10235 4008961a77e533a47c7a9fc25ebaebc6 172 Gene3D G3DSA:2.60.40.200 24 172 3.4E-45 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS10235 4008961a77e533a47c7a9fc25ebaebc6 172 PANTHER PTHR10003 1 172 1.0E-59 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 LK04_RS10235 4008961a77e533a47c7a9fc25ebaebc6 172 PANTHER PTHR10003:SF40 1 172 1.0E-59 T 22-04-2016 LK04_RS08220 a09b323bb68eadff415e171667710383 300 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LK04_RS08220 a09b323bb68eadff415e171667710383 300 Pfam PF00849 RNA pseudouridylate synthase 69 199 1.0E-15 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS08220 a09b323bb68eadff415e171667710383 300 SUPERFAMILY SSF55120 69 233 1.07E-43 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS08220 a09b323bb68eadff415e171667710383 300 PANTHER PTHR21600 1 285 4.8E-102 T 22-04-2016 LK04_RS08220 a09b323bb68eadff415e171667710383 300 Pfam PF01479 S4 domain 4 43 5.9E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS08220 a09b323bb68eadff415e171667710383 300 Gene3D G3DSA:3.10.290.10 3 61 1.5E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS08220 a09b323bb68eadff415e171667710383 300 SUPERFAMILY SSF55174 5 98 4.42E-12 T 22-04-2016 LK04_RS08220 a09b323bb68eadff415e171667710383 300 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 4.1E-63 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LK04_RS08220 a09b323bb68eadff415e171667710383 300 SMART SM00363 3 74 5.1E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS08220 a09b323bb68eadff415e171667710383 300 PANTHER PTHR21600:SF2 1 285 4.8E-102 T 22-04-2016 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 Pfam PF00453 Ribosomal protein L20 3 109 2.8E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.084 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 SUPERFAMILY SSF74731 3 117 1.1E-50 T 22-04-2016 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 Gene3D G3DSA:1.10.1900.20 55 117 2.0E-31 T 22-04-2016 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 PANTHER PTHR10986:SF12 2 117 9.0E-68 T 22-04-2016 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.1E-53 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 PANTHER PTHR10986 2 117 9.0E-68 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LK04_RS10460 fd92c541014d006d7c2f1ebe4d447948 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 22-04-2016 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 Gene3D G3DSA:3.30.450.20 534 655 5.2E-16 T 22-04-2016 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 281 404 3.3E-30 T 22-04-2016 IPR000014 PAS domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 538 663 4.8E-9 T 22-04-2016 IPR000014 PAS domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SUPERFAMILY SSF55785 396 523 2.97E-11 T 22-04-2016 IPR000014 PAS domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 Gene3D G3DSA:3.30.450.20 282 419 2.4E-24 T 22-04-2016 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SMART SM00086 615 657 0.21 T 22-04-2016 IPR001610 PAC motif LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SMART SM00086 357 399 1.8E-9 T 22-04-2016 IPR001610 PAC motif LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SMART SM00086 484 525 0.48 T 22-04-2016 IPR001610 PAC motif LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 PANTHER PTHR24423:SF477 658 676 7.2E-96 T 22-04-2016 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 PANTHER PTHR24423 658 676 7.2E-96 T 22-04-2016 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 Pfam PF13426 PAS domain 549 656 4.9E-8 T 22-04-2016 IPR000014 PAS domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 Pfam PF05231 MASE1 2 262 2.4E-20 T 22-04-2016 IPR007895 MASE1 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SUPERFAMILY SSF55785 522 655 7.5E-15 T 22-04-2016 IPR000014 PAS domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 Pfam PF08447 PAS fold 309 390 2.6E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 Pfam PF08447 PAS fold 435 518 4.0E-6 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SUPERFAMILY SSF55785 291 401 2.97E-23 T 22-04-2016 IPR000014 PAS domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 Gene3D G3DSA:3.30.70.270 670 831 6.4E-53 T 22-04-2016 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 PANTHER PTHR24423 75 542 7.2E-96 T 22-04-2016 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SMART SM00267 657 829 1.1E-60 T 22-04-2016 IPR000160 GGDEF domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 Gene3D G3DSA:3.30.450.20 420 533 4.8E-15 T 22-04-2016 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 Pfam PF00990 Diguanylate cyclase, GGDEF domain 668 824 8.8E-44 T 22-04-2016 IPR000160 GGDEF domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 PANTHER PTHR24423:SF477 75 542 7.2E-96 T 22-04-2016 LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 666 828 2.2E-40 T 22-04-2016 IPR000160 GGDEF domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SMART SM00091 537 602 5.7E-4 T 22-04-2016 IPR000014 PAS domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SMART SM00091 411 478 14.0 T 22-04-2016 IPR000014 PAS domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SMART SM00091 284 350 8.4E-10 T 22-04-2016 IPR000014 PAS domain LK04_RS06025 08e9383058e2e8a89ccf1ebbb9fe0a6b 834 SUPERFAMILY SSF55073 673 830 6.98E-46 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS02700 ef0a82b6d5eeb7b19de18f7de1e6c7cb 380 Pfam PF04055 Radical SAM superfamily 11 179 3.5E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS02700 ef0a82b6d5eeb7b19de18f7de1e6c7cb 380 SMART SM00729 6 223 7.3E-55 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LK04_RS02700 ef0a82b6d5eeb7b19de18f7de1e6c7cb 380 PANTHER PTHR13932 5 379 2.0E-223 T 22-04-2016 LK04_RS02700 ef0a82b6d5eeb7b19de18f7de1e6c7cb 380 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 1.7E-141 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- LK04_RS02700 ef0a82b6d5eeb7b19de18f7de1e6c7cb 380 PANTHER PTHR13932:SF7 5 379 2.0E-223 T 22-04-2016 LK04_RS02700 ef0a82b6d5eeb7b19de18f7de1e6c7cb 380 Pfam PF06969 HemN C-terminal domain 303 364 3.2E-11 T 22-04-2016 IPR010723 HemN, C-terminal LK04_RS02700 ef0a82b6d5eeb7b19de18f7de1e6c7cb 380 SUPERFAMILY SSF102114 5 376 1.57E-111 T 22-04-2016 LK04_RS02700 ef0a82b6d5eeb7b19de18f7de1e6c7cb 380 Gene3D G3DSA:3.80.30.20 7 239 5.2E-28 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 9 270 9.4E-114 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 Gene3D G3DSA:3.40.50.620 8 73 2.5E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 Gene3D G3DSA:3.40.50.620 174 222 2.5E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 Gene3D G3DSA:3.90.800.10 74 172 2.0E-15 T 22-04-2016 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 PANTHER PTHR11451:SF35 9 238 6.5E-115 T 22-04-2016 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 SUPERFAMILY SSF52374 9 287 8.73E-86 T 22-04-2016 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 40 53 2.2E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 188 196 2.2E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 25 36 2.2E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 172 182 2.2E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 11 23 2.2E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 8 292 40.444 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 11 260 4.8E-46 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS15105 dc2d55d718c524de4ddbad24629b61bc 311 PANTHER PTHR11451 9 238 6.5E-115 T 22-04-2016 LK04_RS04345 06f544b64091ba3e94fd26e653f36eda 254 Gene3D G3DSA:3.40.50.300 23 185 6.9E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04345 06f544b64091ba3e94fd26e653f36eda 254 Pfam PF00308 Bacterial dnaA protein 37 233 2.7E-15 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA LK04_RS04345 06f544b64091ba3e94fd26e653f36eda 254 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 27 253 6.3E-82 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 LK04_RS04345 06f544b64091ba3e94fd26e653f36eda 254 PANTHER PTHR30050:SF5 25 253 1.2E-116 T 22-04-2016 LK04_RS04345 06f544b64091ba3e94fd26e653f36eda 254 SUPERFAMILY SSF52540 49 233 3.95E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04345 06f544b64091ba3e94fd26e653f36eda 254 Gene3D G3DSA:1.10.8.60 188 253 4.9E-30 T 22-04-2016 LK04_RS04345 06f544b64091ba3e94fd26e653f36eda 254 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 26 254 58.516 T 22-04-2016 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae LK04_RS04345 06f544b64091ba3e94fd26e653f36eda 254 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 152 179 8.1E-7 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LK04_RS04345 06f544b64091ba3e94fd26e653f36eda 254 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 64 84 8.1E-7 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LK04_RS04345 06f544b64091ba3e94fd26e653f36eda 254 PANTHER PTHR30050 25 253 1.2E-116 T 22-04-2016 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 SUPERFAMILY SSF63380 229 447 1.24E-63 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 Gene3D G3DSA:3.40.50.360 56 208 3.4E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 Pfam PF00667 FAD binding domain 231 425 3.2E-26 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 Pfam PF00258 Flavodoxin 66 195 5.6E-31 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 SUPERFAMILY SSF52343 445 600 1.7E-50 T 22-04-2016 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 Gene3D G3DSA:2.40.30.10 385 455 1.1E-40 T 22-04-2016 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 Gene3D G3DSA:2.40.30.10 230 281 1.1E-40 T 22-04-2016 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PIRSF PIRSF000207 1 600 2.1E-276 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 Gene3D G3DSA:3.40.50.80 456 600 4.2E-58 T 22-04-2016 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 482 491 3.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 271 281 3.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 387 394 3.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 420 429 3.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 457 476 3.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 495 506 3.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 526 542 3.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 557 3.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 Pfam PF00175 Oxidoreductase NAD-binding domain 458 564 1.6E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 1 600 51.836 T 22-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PANTHER PTHR19384 56 600 5.0E-220 T 22-04-2016 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PANTHER PTHR19384:SF76 56 600 5.0E-220 T 22-04-2016 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00369 Flavodoxin signature 144 154 1.3E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00369 Flavodoxin signature 64 77 1.3E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00369 Flavodoxin signature 112 123 1.3E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 PRINTS PR00369 Flavodoxin signature 168 187 1.3E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 9 600 4.3E-271 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 Gene3D G3DSA:1.20.990.10 282 384 4.4E-39 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 LK04_RS03445 2713f0548ce11840c3bc300af0871e9a 600 SUPERFAMILY SSF52218 62 208 1.22E-41 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 58 1.3E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 SUPERFAMILY SSF48008 158 294 1.65E-13 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 Gene3D G3DSA:1.10.10.10 90 149 1.7E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 SUPERFAMILY SSF46785 90 151 4.42E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 Gene3D G3DSA:1.20.120.530 155 298 1.4E-14 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 Pfam PF07729 FCD domain 160 285 8.5E-12 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 SMART SM00895 159 287 2.6E-11 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 7.0E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 7.0E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 SUPERFAMILY SSF46785 3 72 4.21E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00110 9094361240be10b5adf0adf985f97dea 300 Gene3D G3DSA:1.10.10.10 2 75 5.2E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17760 9f71e250b144ed83ed5d56c1a0d9118e 215 Gene3D G3DSA:3.20.20.70 5 207 3.2E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS17760 9f71e250b144ed83ed5d56c1a0d9118e 215 PANTHER PTHR20857 1 206 1.1E-67 T 22-04-2016 LK04_RS17760 9f71e250b144ed83ed5d56c1a0d9118e 215 SUPERFAMILY SSF51391 10 206 2.49E-63 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS17760 9f71e250b144ed83ed5d56c1a0d9118e 215 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 2 206 20.577 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS17760 9f71e250b144ed83ed5d56c1a0d9118e 215 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 19 201 1.8E-57 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS17760 9f71e250b144ed83ed5d56c1a0d9118e 215 Pfam PF02581 Thiamine monophosphate synthase/TENI 19 188 8.6E-58 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 Gene3D G3DSA:3.30.420.40 169 209 4.9E-5 T 22-04-2016 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 Pfam PF14450 Cell division protein FtsA 207 381 1.7E-24 T 22-04-2016 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 PANTHER PTHR32432 1 413 1.5E-180 T 22-04-2016 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 Gene3D G3DSA:3.90.640.10 235 297 4.6E-18 T 22-04-2016 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 3.2E-161 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 PANTHER PTHR32432:SF4 1 413 1.5E-180 T 22-04-2016 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 4.5E-30 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 PIRSF PIRSF003101 2 418 3.5E-153 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 SUPERFAMILY SSF53067 8 221 2.88E-61 T 22-04-2016 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.5 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 Gene3D G3DSA:3.30.420.40 6 138 8.1E-33 T 22-04-2016 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 Gene3D G3DSA:3.30.420.40 210 234 2.2E-29 T 22-04-2016 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 Gene3D G3DSA:3.30.420.40 298 359 2.2E-29 T 22-04-2016 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 SUPERFAMILY SSF53067 198 384 3.55E-47 T 22-04-2016 LK04_RS15385 64e6f61218d30f4ba9adc5338f0ae321 418 SMART SM00842 10 196 9.7E-96 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 SUPERFAMILY SSF56024 500 683 8.3E-70 T 22-04-2016 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 1.3E-30 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 2.5E-146 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 SUPERFAMILY SSF56024 317 498 7.53E-57 T 22-04-2016 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 34.447 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 SUPERFAMILY SSF143724 107 312 1.8E-59 T 22-04-2016 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 Gene3D G3DSA:3.30.870.10 319 499 1.9E-74 T 22-04-2016 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 PANTHER PTHR30218:SF0 1 686 0.0 T 22-04-2016 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 Gene3D G3DSA:3.30.1840.10 106 300 1.6E-52 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 Gene3D G3DSA:3.30.870.10 500 683 1.7E-70 T 22-04-2016 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 PANTHER PTHR30218 1 686 0.0 T 22-04-2016 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 4.7E-258 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 SUPERFAMILY SSF140356 3 105 4.71E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 PIRSF PIRSF015589 1 686 4.5E-243 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LK04_RS04305 dd50b2b8d9ac30d8ff8bcff786311792 686 Pfam PF02503 Polyphosphate kinase middle domain 119 318 4.1E-42 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 LK04_RS17755 309bffbd330cb052171b661b04e7ab03 641 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 147 598 3.1E-223 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 LK04_RS17755 309bffbd330cb052171b661b04e7ab03 641 PANTHER PTHR30557 140 170 0.0 T 22-04-2016 LK04_RS17755 309bffbd330cb052171b661b04e7ab03 641 PANTHER PTHR30557 198 631 0.0 T 22-04-2016 LK04_RS17755 309bffbd330cb052171b661b04e7ab03 641 PANTHER PTHR30557 8 106 0.0 T 22-04-2016 LK04_RS17755 309bffbd330cb052171b661b04e7ab03 641 Pfam PF13667 ThiC-associated domain 27 108 7.5E-32 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 LK04_RS17755 309bffbd330cb052171b661b04e7ab03 641 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 147 601 55.962 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 LK04_RS17755 309bffbd330cb052171b661b04e7ab03 641 Pfam PF01964 Radical SAM ThiC family 148 596 1.1E-198 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 LK04_RS17755 309bffbd330cb052171b661b04e7ab03 641 PANTHER PTHR30557:SF1 140 170 0.0 T 22-04-2016 LK04_RS17755 309bffbd330cb052171b661b04e7ab03 641 PANTHER PTHR30557:SF1 198 631 0.0 T 22-04-2016 LK04_RS17755 309bffbd330cb052171b661b04e7ab03 641 PANTHER PTHR30557:SF1 8 106 0.0 T 22-04-2016 LK04_RS13555 63a7937391d1a4f9e379b1ec00ea997d 469 Gene3D G3DSA:3.55.50.10 118 210 4.4E-16 T 22-04-2016 LK04_RS13555 63a7937391d1a4f9e379b1ec00ea997d 469 PANTHER PTHR32305:SF7 39 469 2.1E-24 T 22-04-2016 LK04_RS13555 63a7937391d1a4f9e379b1ec00ea997d 469 PANTHER PTHR32305 39 469 2.1E-24 T 22-04-2016 LK04_RS13555 63a7937391d1a4f9e379b1ec00ea997d 469 SUPERFAMILY SSF69279 211 381 5.44E-30 T 22-04-2016 LK04_RS13555 63a7937391d1a4f9e379b1ec00ea997d 469 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 469 6.8E-57 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset LK04_RS13555 63a7937391d1a4f9e379b1ec00ea997d 469 Pfam PF05954 Phage late control gene D protein (GPD) 44 353 7.9E-43 T 22-04-2016 LK04_RS13555 63a7937391d1a4f9e379b1ec00ea997d 469 SUPERFAMILY SSF69279 26 208 2.21E-35 T 22-04-2016 LK04_RS13555 63a7937391d1a4f9e379b1ec00ea997d 469 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 36 469 3.6E-73 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein LK04_RS13555 63a7937391d1a4f9e379b1ec00ea997d 469 SUPERFAMILY SSF69255 385 469 1.83E-24 T 22-04-2016 LK04_RS13555 63a7937391d1a4f9e379b1ec00ea997d 469 Gene3D G3DSA:2.40.50.230 393 469 2.0E-24 T 22-04-2016 IPR006531 Gp5 N-terminal LK04_RS18240 982262a1cbe412aac9367b123427ec7f 504 SUPERFAMILY SSF63411 259 465 3.67E-6 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LK04_RS18240 982262a1cbe412aac9367b123427ec7f 504 Gene3D G3DSA:3.30.830.10 34 247 1.4E-16 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LK04_RS18240 982262a1cbe412aac9367b123427ec7f 504 Pfam PF00675 Insulinase (Peptidase family M16) 52 158 1.4E-5 T 22-04-2016 IPR011765 Peptidase M16, N-terminal LK04_RS18240 982262a1cbe412aac9367b123427ec7f 504 PANTHER PTHR11851:SF136 1 491 1.8E-59 T 22-04-2016 LK04_RS18240 982262a1cbe412aac9367b123427ec7f 504 PANTHER PTHR11851 1 491 1.8E-59 T 22-04-2016 LK04_RS18240 982262a1cbe412aac9367b123427ec7f 504 Pfam PF05193 Peptidase M16 inactive domain 202 377 1.8E-13 T 22-04-2016 IPR007863 Peptidase M16, C-terminal LK04_RS18240 982262a1cbe412aac9367b123427ec7f 504 SUPERFAMILY SSF63411 29 239 5.32E-21 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 609 666 3.7E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 Pfam PF00175 Oxidoreductase NAD-binding domain 436 546 1.4E-11 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 PANTHER PTHR30212:SF3 4 292 1.7E-70 T 22-04-2016 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 SUPERFAMILY SSF63380 324 424 2.69E-28 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 SUPERFAMILY SSF50475 169 268 9.82E-12 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 170 261 1.4E-14 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 Gene3D G3DSA:2.40.30.10 324 415 4.7E-30 T 22-04-2016 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 Gene3D G3DSA:2.30.110.10 168 283 1.1E-13 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 Gene3D G3DSA:3.10.20.30 561 668 3.1E-20 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 Gene3D G3DSA:3.40.50.80 416 560 1.3E-31 T 22-04-2016 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 PANTHER PTHR30212 4 292 1.7E-70 T 22-04-2016 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 SUPERFAMILY SSF54292 558 675 8.26E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 534 542 9.6E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 435 454 9.6E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 378 385 9.6E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 244 254 9.6E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 PRINTS PR00410 Phenol hydroxylase reductase family signature 419 428 1.0E-7 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 PRINTS PR00410 Phenol hydroxylase reductase family signature 435 454 1.0E-7 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 PRINTS PR00410 Phenol hydroxylase reductase family signature 534 542 1.0E-7 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 Pfam PF00970 Oxidoreductase FAD-binding domain 329 424 1.1E-10 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 SUPERFAMILY SSF52343 429 570 1.83E-32 T 22-04-2016 LK04_RS02325 03d7e1578d713cf438d9fda07d306b81 680 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 627 635 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LK04_RS05930 2ea104d70a4d309359e4502b130715bc 350 SMART SM01133 68 326 2.0E-41 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 LK04_RS05930 2ea104d70a4d309359e4502b130715bc 350 Gene3D G3DSA:3.20.20.70 52 345 6.7E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS05930 2ea104d70a4d309359e4502b130715bc 350 SUPERFAMILY SSF51569 270 343 7.81E-64 T 22-04-2016 LK04_RS05930 2ea104d70a4d309359e4502b130715bc 350 SUPERFAMILY SSF51569 56 242 7.81E-64 T 22-04-2016 LK04_RS05930 2ea104d70a4d309359e4502b130715bc 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 9.4E-72 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 SUPERFAMILY SSF46785 8 112 1.33E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 Gene3D G3DSA:1.10.10.10 6 86 1.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 Pfam PF03466 LysR substrate binding domain 91 286 7.1E-37 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 6.5E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 PANTHER PTHR30537 1 292 2.7E-94 T 22-04-2016 LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 Gene3D G3DSA:3.40.190.10 177 254 9.3E-12 T 22-04-2016 LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 Gene3D G3DSA:3.40.190.10 94 176 3.3E-27 T 22-04-2016 LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.13E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.13E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.13E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 SUPERFAMILY SSF53850 92 288 6.52E-38 T 22-04-2016 LK04_RS06445 7dc1a46f252736d12deab5c1eaaec0dc 297 PANTHER PTHR30537:SF26 1 292 2.7E-94 T 22-04-2016 LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 Gene3D G3DSA:3.40.50.2300 60 178 5.7E-13 T 22-04-2016 LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 Gene3D G3DSA:1.10.260.40 4 46 6.4E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 Pfam PF13407 Periplasmic binding protein domain 63 317 3.0E-32 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 46 3.8E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 Gene3D G3DSA:3.40.50.2300 179 322 1.3E-22 T 22-04-2016 LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 SMART SM00354 3 56 1.1E-4 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 SUPERFAMILY SSF53822 58 321 2.36E-33 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 PANTHER PTHR30146 3 289 1.8E-33 T 22-04-2016 LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 PANTHER PTHR30146:SF26 3 289 1.8E-33 T 22-04-2016 LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS16890 240c80457c0eee08abf6709ec2a9ffc1 339 SUPERFAMILY SSF47413 2 46 1.02E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PANTHER PTHR22773 1 566 4.9E-238 T 22-04-2016 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 3.1E-55 T 22-04-2016 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 3.1E-55 T 22-04-2016 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 3.1E-55 T 22-04-2016 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 3.1E-55 T 22-04-2016 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 3.1E-55 T 22-04-2016 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 3.1E-55 T 22-04-2016 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 3.1E-55 T 22-04-2016 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 5.1E-22 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PANTHER PTHR22773:SF50 1 566 4.9E-238 T 22-04-2016 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 358 380 9.6E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 9.6E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 9.6E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 9.6E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 609 1.1E-234 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 LK04_RS05540 dd680bbc6a6ce8c19fa9074e5768231b 611 Pfam PF00361 Proton-conducting membrane transporter 133 425 2.7E-97 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 LK04_RS06130 84d9288f61a199b4963004f22bfda1fe 293 PANTHER PTHR22572:SF105 5 272 1.5E-186 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LK04_RS06130 84d9288f61a199b4963004f22bfda1fe 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 288 3.0E-160 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LK04_RS06130 84d9288f61a199b4963004f22bfda1fe 293 SUPERFAMILY SSF53448 5 289 8.94E-97 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06130 84d9288f61a199b4963004f22bfda1fe 293 Gene3D G3DSA:3.90.550.10 4 266 2.8E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06130 84d9288f61a199b4963004f22bfda1fe 293 PANTHER PTHR22572 5 272 1.5E-186 T 22-04-2016 LK04_RS06130 84d9288f61a199b4963004f22bfda1fe 293 Pfam PF00483 Nucleotidyl transferase 5 241 4.4E-73 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LK04_RS13895 41fc51a79c114b124f9e9eed727b2a6c 185 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 43 146 6.9E-42 T 22-04-2016 LK04_RS13895 41fc51a79c114b124f9e9eed727b2a6c 185 PANTHER PTHR38013 1 185 8.0E-51 T 22-04-2016 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 437 3.3E-60 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Gene3D G3DSA:3.40.50.300 18 84 3.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Gene3D G3DSA:3.40.50.300 352 450 3.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Gene3D G3DSA:3.40.50.300 122 152 3.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 SUPERFAMILY SSF52980 900 1176 7.51E-88 T 22-04-2016 IPR011335 Restriction endonuclease type II-like LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 7 1175 15.277 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Gene3D G3DSA:1.10.486.10 584 729 5.2E-55 T 22-04-2016 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 PANTHER PTHR11070 795 1170 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 PANTHER PTHR11070 120 217 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 PANTHER PTHR11070 1 91 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 PANTHER PTHR11070 301 775 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Gene3D G3DSA:3.90.320.10 891 1176 2.4E-102 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Gene3D G3DSA:1.10.3170.10 157 349 9.3E-60 T 22-04-2016 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Pfam PF13361 UvrD-like helicase C-terminal domain 672 809 2.2E-9 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Pfam PF13361 UvrD-like helicase C-terminal domain 535 632 2.5E-6 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 SUPERFAMILY SSF52540 18 82 7.17E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 SUPERFAMILY SSF52540 120 204 7.17E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 SUPERFAMILY SSF52540 326 768 7.17E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 SUPERFAMILY SSF52540 796 822 7.17E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Gene3D G3DSA:3.40.50.300 730 879 2.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 Gene3D G3DSA:3.40.50.300 451 581 2.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1174 0.0 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 PANTHER PTHR11070:SF23 795 1170 0.0 T 22-04-2016 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 PANTHER PTHR11070:SF23 120 217 0.0 T 22-04-2016 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 PANTHER PTHR11070:SF23 1 91 0.0 T 22-04-2016 LK04_RS03250 f438d8a4c92ec67991decdb553de2f31 1181 PANTHER PTHR11070:SF23 301 775 0.0 T 22-04-2016 LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 Gene3D G3DSA:2.30.42.10 251 333 1.1E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 SUPERFAMILY SSF50156 217 341 9.02E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 PANTHER PTHR32060:SF11 2 603 0.0 T 22-04-2016 LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 SMART SM00245 325 530 5.5E-74 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 534 666 8.4E-42 T 22-04-2016 IPR020992 Tail specific protease, C-terminal LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 SUPERFAMILY SSF52096 349 534 4.47E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 SUPERFAMILY SSF52096 181 263 4.47E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 Gene3D G3DSA:3.90.226.10 645 673 3.2E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 Gene3D G3DSA:3.90.226.10 334 532 3.2E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 319 1.4E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 Gene3D G3DSA:3.30.750.44 204 250 9.7E-4 T 22-04-2016 LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 PANTHER PTHR32060 2 603 0.0 T 22-04-2016 LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 SMART SM00228 245 322 2.2E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 Pfam PF03572 Peptidase family S41 355 527 5.1E-52 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 LK04_RS07755 fcccdf290afb90a2a04029f3e1b294d9 678 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 193 550 1.0E-123 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 LK04_RS18010 59835af509bda55a76bd65585f97cf0c 330 SUPERFAMILY SSF53474 15 329 1.77E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS18010 59835af509bda55a76bd65585f97cf0c 330 Pfam PF12146 Serine aminopeptidase, S33 52 312 6.7E-57 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 LK04_RS18010 59835af509bda55a76bd65585f97cf0c 330 PANTHER PTHR11614:SF100 11 328 3.0E-143 T 22-04-2016 LK04_RS18010 59835af509bda55a76bd65585f97cf0c 330 Gene3D G3DSA:3.40.50.1820 29 328 2.5E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS18010 59835af509bda55a76bd65585f97cf0c 330 PANTHER PTHR11614 11 328 3.0E-143 T 22-04-2016 LK04_RS02575 711c53cc821f30ef32dfee8dde6c54c9 260 PANTHER PTHR30157:SF1 4 259 1.8E-72 T 22-04-2016 LK04_RS02575 711c53cc821f30ef32dfee8dde6c54c9 260 Gene3D G3DSA:3.40.50.80 139 259 1.6E-17 T 22-04-2016 LK04_RS02575 711c53cc821f30ef32dfee8dde6c54c9 260 Pfam PF04954 Siderophore-interacting protein 145 259 3.7E-16 T 22-04-2016 IPR007037 Siderophore-interacting protein LK04_RS02575 711c53cc821f30ef32dfee8dde6c54c9 260 SUPERFAMILY SSF63380 9 138 8.85E-14 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LK04_RS02575 711c53cc821f30ef32dfee8dde6c54c9 260 Pfam PF08021 Siderophore-interacting FAD-binding domain 24 135 2.2E-27 T 22-04-2016 IPR013113 FAD-binding 9, siderophore-interacting LK04_RS02575 711c53cc821f30ef32dfee8dde6c54c9 260 PANTHER PTHR30157 4 259 1.8E-72 T 22-04-2016 LK04_RS02575 711c53cc821f30ef32dfee8dde6c54c9 260 Gene3D G3DSA:2.40.30.10 13 134 6.3E-29 T 22-04-2016 LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.0E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 SMART SM01403 7 101 1.0E-56 T 22-04-2016 IPR027486 Ribosomal protein S10 domain LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 Gene3D G3DSA:3.30.70.600 3 102 8.7E-44 T 22-04-2016 IPR027486 Ribosomal protein S10 domain LK04_RS00865 2f4497a4327376f1a2bf4db96272c07f 103 PANTHER PTHR11700 1 102 1.5E-54 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 Pfam PF02119 Flagellar P-ring protein 26 368 1.1E-135 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PANTHER PTHR30381:SF1 1 369 6.8E-210 T 22-04-2016 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 7 369 38.093 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PRINTS PR01010 Flagellar P-ring protein signature 61 76 3.7E-90 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PRINTS PR01010 Flagellar P-ring protein signature 26 41 3.7E-90 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PRINTS PR01010 Flagellar P-ring protein signature 126 144 3.7E-90 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PRINTS PR01010 Flagellar P-ring protein signature 87 106 3.7E-90 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PRINTS PR01010 Flagellar P-ring protein signature 192 210 3.7E-90 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PRINTS PR01010 Flagellar P-ring protein signature 109 126 3.7E-90 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PRINTS PR01010 Flagellar P-ring protein signature 166 184 3.7E-90 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PRINTS PR01010 Flagellar P-ring protein signature 41 56 3.7E-90 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PRINTS PR01010 Flagellar P-ring protein signature 255 267 3.7E-90 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LK04_RS11365 e220280f0146887c3a5cec269ac98069 369 PANTHER PTHR30381 1 369 6.8E-210 T 22-04-2016 LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 PANTHER PTHR11070:SF19 1 668 0.0 T 22-04-2016 LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 3.1E-72 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 SUPERFAMILY SSF52540 2 636 1.74E-161 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 Gene3D G3DSA:1.10.486.10 383 529 2.6E-38 T 22-04-2016 LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 Gene3D G3DSA:1.10.10.160 108 181 1.3E-23 T 22-04-2016 IPR013986 DExx box DNA helicase domain LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 Gene3D G3DSA:3.40.50.300 182 279 4.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 Gene3D G3DSA:3.40.50.300 2 104 4.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 41.002 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 7.1E-73 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 Gene3D G3DSA:3.40.50.300 280 382 2.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 Gene3D G3DSA:3.40.50.300 550 638 2.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18210 8911724bb3aa87774df15d47436898ed 673 PANTHER PTHR11070 1 668 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 SUPERFAMILY SSF53850 88 295 1.04E-44 T 22-04-2016 LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 Gene3D G3DSA:3.40.190.10 92 179 1.9E-23 T 22-04-2016 LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 PANTHER PTHR30126 1 309 1.7E-153 T 22-04-2016 LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 PANTHER PTHR30126:SF6 1 309 1.7E-153 T 22-04-2016 LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 Gene3D G3DSA:1.10.10.10 2 81 2.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 2.3E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 Gene3D G3DSA:3.40.190.10 180 260 4.4E-24 T 22-04-2016 LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 SUPERFAMILY SSF46785 3 112 1.28E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06535 f5fccf3568be752fe8dff4308c742ef5 319 Pfam PF03466 LysR substrate binding domain 89 294 5.7E-45 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS08310 137f651b0fd5bd4d98f42e998c16191f 288 SUPERFAMILY SSF52096 26 262 2.28E-33 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS08310 137f651b0fd5bd4d98f42e998c16191f 288 PANTHER PTHR11941 246 257 1.3E-18 T 22-04-2016 LK04_RS08310 137f651b0fd5bd4d98f42e998c16191f 288 PANTHER PTHR11941 44 209 1.3E-18 T 22-04-2016 LK04_RS08310 137f651b0fd5bd4d98f42e998c16191f 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 68 236 9.0E-18 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LK04_RS08310 137f651b0fd5bd4d98f42e998c16191f 288 PANTHER PTHR11941:SF54 246 257 1.3E-18 T 22-04-2016 LK04_RS08310 137f651b0fd5bd4d98f42e998c16191f 288 PANTHER PTHR11941:SF54 44 209 1.3E-18 T 22-04-2016 LK04_RS08310 137f651b0fd5bd4d98f42e998c16191f 288 Gene3D G3DSA:3.90.226.10 25 221 1.3E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS09925 5223a3e0e606929c444a30c67de870a3 305 Pfam PF04492 Bacteriophage replication protein O 19 117 7.9E-25 T 22-04-2016 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 LK04_RS09925 5223a3e0e606929c444a30c67de870a3 305 TIGRFAM TIGR01610 phage_O_Nterm: phage replication protein O, N-terminal domain 21 117 1.1E-39 T 22-04-2016 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 LK04_RS09925 5223a3e0e606929c444a30c67de870a3 305 Gene3D G3DSA:1.10.10.10 64 97 6.4E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06685 cbf498e7efedc4cc84d7a51041a32461 276 SUPERFAMILY SSF52540 24 261 6.57E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06685 cbf498e7efedc4cc84d7a51041a32461 276 Pfam PF00005 ABC transporter 40 201 1.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06685 cbf498e7efedc4cc84d7a51041a32461 276 SMART SM00382 49 270 2.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06685 cbf498e7efedc4cc84d7a51041a32461 276 PANTHER PTHR24220 26 271 1.3E-110 T 22-04-2016 LK04_RS06685 cbf498e7efedc4cc84d7a51041a32461 276 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 25 269 4.7E-88 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 LK04_RS06685 cbf498e7efedc4cc84d7a51041a32461 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06685 cbf498e7efedc4cc84d7a51041a32461 276 Gene3D G3DSA:3.40.50.300 23 261 1.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06685 cbf498e7efedc4cc84d7a51041a32461 276 PANTHER PTHR24220:SF408 26 271 1.3E-110 T 22-04-2016 LK04_RS09030 93bd4131a1c00639b593b58eadcfea10 183 Pfam PF01161 Phosphatidylethanolamine-binding protein 51 179 8.5E-30 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein LK04_RS09030 93bd4131a1c00639b593b58eadcfea10 183 SUPERFAMILY SSF49777 22 181 1.15E-37 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein LK04_RS09030 93bd4131a1c00639b593b58eadcfea10 183 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 45 175 1.0E-23 T 22-04-2016 IPR005247 YbhB/YbcL LK04_RS09030 93bd4131a1c00639b593b58eadcfea10 183 Gene3D G3DSA:3.90.280.10 23 181 5.1E-40 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein LK04_RS09030 93bd4131a1c00639b593b58eadcfea10 183 PANTHER PTHR30289 19 179 2.4E-26 T 22-04-2016 LK04_RS11215 b6fa364ce04532da6193e1072395e5d0 180 PANTHER PTHR35603 1 176 4.1E-90 T 22-04-2016 LK04_RS11215 b6fa364ce04532da6193e1072395e5d0 180 PANTHER PTHR35603:SF2 1 176 4.1E-90 T 22-04-2016 LK04_RS11215 b6fa364ce04532da6193e1072395e5d0 180 Pfam PF05433 Glycine zipper 2TM domain 73 113 1.5E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 SUPERFAMILY SSF51556 73 376 3.7E-99 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 31 429 1.1E-179 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 Gene3D G3DSA:2.30.40.10 376 435 1.7E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 Gene3D G3DSA:2.30.40.10 30 74 1.7E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 Gene3D G3DSA:3.20.20.140 75 375 3.4E-113 T 22-04-2016 LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 SUPERFAMILY SSF51338 420 435 1.57E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 SUPERFAMILY SSF51338 29 73 1.57E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 SUPERFAMILY SSF51338 375 391 1.57E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 PANTHER PTHR11271:SF6 31 439 2.3E-160 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 PANTHER PTHR11271 31 439 2.3E-160 T 22-04-2016 LK04_RS08780 9e6a8a5b8fa458d76746fe9809058080 442 Pfam PF01979 Amidohydrolase family 71 432 4.0E-73 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 SMART SM00478 40 191 1.9E-55 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 Gene3D G3DSA:1.10.1670.10 124 225 7.7E-40 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LK04_RS02660 bc34111217cadb951722d569e42ab357 361 Pfam PF00633 Helix-hairpin-helix motif 101 128 2.3E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 SMART SM00525 192 212 1.7E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 Gene3D G3DSA:3.90.79.10 231 348 3.1E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 193 209 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site LK04_RS02660 bc34111217cadb951722d569e42ab357 361 SUPERFAMILY SSF48150 4 226 5.97E-80 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 SUPERFAMILY SSF55811 221 344 1.76E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 193 209 1.4E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 Pfam PF14815 NUDIX domain 235 342 8.8E-23 T 22-04-2016 IPR029119 MutY, C-terminal LK04_RS02660 bc34111217cadb951722d569e42ab357 361 Gene3D G3DSA:1.10.340.30 23 123 3.2E-46 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 PANTHER PTHR10359 6 348 4.8E-111 T 22-04-2016 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 168 1.5E-21 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LK04_RS02660 bc34111217cadb951722d569e42ab357 361 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 278 7.2E-127 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 PIRSF PIRSF000094 1 260 2.9E-125 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 PANTHER PTHR24322:SF317 159 191 1.2E-66 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 PANTHER PTHR24322:SF317 11 143 1.2E-66 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.7E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.7E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.7E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 PANTHER PTHR24322 159 191 1.2E-66 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 PANTHER PTHR24322 11 143 1.2E-66 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 9.7E-86 T 22-04-2016 LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 SUPERFAMILY SSF51735 6 253 3.66E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08355 e53effa894c51300ef46fc143c0aecf0 262 Gene3D G3DSA:3.40.50.720 2 253 2.8E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 Gene3D G3DSA:1.10.10.10 90 135 6.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 Pfam PF04539 Sigma-70 region 3 97 166 8.1E-16 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 4.4E-85 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 PANTHER PTHR30385:SF7 15 237 1.4E-68 T 22-04-2016 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 Pfam PF04542 Sigma-70 region 2 16 88 4.4E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 Gene3D G3DSA:1.10.601.10 13 80 2.4E-14 T 22-04-2016 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 SUPERFAMILY SSF88659 161 237 1.2E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 SUPERFAMILY SSF88659 90 156 7.85E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 62.269 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 PANTHER PTHR30385 15 237 1.4E-68 T 22-04-2016 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 2.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 2.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 2.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 2.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 2.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 2.3E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 SUPERFAMILY SSF88946 5 88 4.08E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 Pfam PF04545 Sigma-70, region 4 185 234 8.9E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 Gene3D G3DSA:1.10.10.10 174 237 3.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07055 a895acfc91da68fe4751f9522135c88f 240 PIRSF PIRSF000770 4 240 2.3E-41 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 LK04_RS14495 ae44f3f7326df75d795bf1b675370aed 116 SUPERFAMILY SSF54909 18 113 1.18E-27 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS14495 ae44f3f7326df75d795bf1b675370aed 116 Pfam PF05336 Domain of unknown function (DUF718) 12 113 8.5E-30 T 22-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 LK04_RS14495 ae44f3f7326df75d795bf1b675370aed 116 PANTHER PTHR34389:SF3 11 116 5.2E-28 T 22-04-2016 LK04_RS14495 ae44f3f7326df75d795bf1b675370aed 116 PANTHER PTHR34389 11 116 5.2E-28 T 22-04-2016 LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 Gene3D G3DSA:3.40.190.10 178 261 1.5E-18 T 22-04-2016 LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 SUPERFAMILY SSF46785 6 90 8.01E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 PANTHER PTHR30537:SF5 1 295 3.4E-79 T 22-04-2016 LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 SUPERFAMILY SSF53850 93 294 1.39E-30 T 22-04-2016 LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 PANTHER PTHR30537 1 295 3.4E-79 T 22-04-2016 LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 Gene3D G3DSA:1.10.10.10 6 90 5.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 Gene3D G3DSA:3.40.190.10 95 177 1.1E-13 T 22-04-2016 LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17030 c46b6badadf4657e66d5d365fcb85d7a 296 Pfam PF03466 LysR substrate binding domain 91 291 2.5E-29 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS15070 5d3793dba9cf35159465dbd58b201ecc 264 PANTHER PTHR24220:SF266 12 259 8.4E-135 T 22-04-2016 LK04_RS15070 5d3793dba9cf35159465dbd58b201ecc 264 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS15070 5d3793dba9cf35159465dbd58b201ecc 264 Pfam PF00005 ABC transporter 26 175 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS15070 5d3793dba9cf35159465dbd58b201ecc 264 PANTHER PTHR24220 12 259 8.4E-135 T 22-04-2016 LK04_RS15070 5d3793dba9cf35159465dbd58b201ecc 264 Gene3D G3DSA:3.40.50.300 8 237 1.8E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15070 5d3793dba9cf35159465dbd58b201ecc 264 SUPERFAMILY SSF52540 11 236 4.28E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15070 5d3793dba9cf35159465dbd58b201ecc 264 SMART SM00382 35 223 6.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS04615 1c006b5212c01f2cda61757714d20aff 338 Pfam PF13531 Bacterial extracellular solute-binding protein 46 286 8.2E-42 T 22-04-2016 LK04_RS04615 1c006b5212c01f2cda61757714d20aff 338 Gene3D G3DSA:3.40.190.10 120 284 6.9E-69 T 22-04-2016 LK04_RS04615 1c006b5212c01f2cda61757714d20aff 338 SUPERFAMILY SSF53850 24 332 7.35E-78 T 22-04-2016 LK04_RS04615 1c006b5212c01f2cda61757714d20aff 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 22 332 4.4E-163 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 LK04_RS04615 1c006b5212c01f2cda61757714d20aff 338 PANTHER PTHR30368:SF1 10 338 7.4E-237 T 22-04-2016 LK04_RS04615 1c006b5212c01f2cda61757714d20aff 338 PANTHER PTHR30368 10 338 7.4E-237 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 SMART SM00846 2 152 4.1E-91 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 326 7.8E-125 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 PANTHER PTHR10836:SF50 1 334 2.8E-195 T 22-04-2016 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 8.4E-34 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 8.4E-34 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 8.4E-34 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 8.4E-34 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 8.4E-34 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 PIRSF PIRSF000149 1 335 1.3E-129 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 7.6E-61 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 Gene3D G3DSA:3.40.50.720 1 160 1.7E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 152 6.5E-58 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 PANTHER PTHR10836 1 334 2.8E-195 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 SUPERFAMILY SSF51735 2 168 3.95E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 Gene3D G3DSA:3.30.360.10 161 316 1.4E-69 T 22-04-2016 LK04_RS07165 93f42323452bc79f89eeaf941dc44c51 336 SUPERFAMILY SSF55347 152 315 2.35E-66 T 22-04-2016 LK04_RS06655 8beda67d0f3cccfd7da643d4e6d9ebd2 282 PIRSF PIRSF011468 1 282 3.6E-165 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 LK04_RS06655 8beda67d0f3cccfd7da643d4e6d9ebd2 282 Pfam PF06007 Phosphonate metabolism protein PhnJ 6 277 9.8E-147 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 LK04_RS13335 f341221c30621226ff33314bac2d6fc6 225 PANTHER PTHR30614 1 225 1.8E-138 T 22-04-2016 LK04_RS13335 f341221c30621226ff33314bac2d6fc6 225 SUPERFAMILY SSF161098 14 210 3.66E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS13335 f341221c30621226ff33314bac2d6fc6 225 Gene3D G3DSA:1.10.3720.10 13 222 7.0E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS13335 f341221c30621226ff33314bac2d6fc6 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 3.2E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS13335 f341221c30621226ff33314bac2d6fc6 225 PANTHER PTHR30614:SF1 1 225 1.8E-138 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 LK04_RS13335 f341221c30621226ff33314bac2d6fc6 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 1.0E-23 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS06540 59dd3c46d97e214b464a80dd04856bce 485 PANTHER PTHR11699:SF49 1 479 1.5E-282 T 22-04-2016 LK04_RS06540 59dd3c46d97e214b464a80dd04856bce 485 PANTHER PTHR11699 1 479 1.5E-282 T 22-04-2016 LK04_RS06540 59dd3c46d97e214b464a80dd04856bce 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LK04_RS06540 59dd3c46d97e214b464a80dd04856bce 485 Gene3D G3DSA:3.40.309.10 272 455 2.8E-72 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS06540 59dd3c46d97e214b464a80dd04856bce 485 Gene3D G3DSA:3.40.605.10 13 271 3.7E-98 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS06540 59dd3c46d97e214b464a80dd04856bce 485 SUPERFAMILY SSF53720 9 482 6.94E-172 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS06540 59dd3c46d97e214b464a80dd04856bce 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LK04_RS06540 59dd3c46d97e214b464a80dd04856bce 485 Pfam PF00171 Aldehyde dehydrogenase family 22 479 3.4E-171 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS06540 59dd3c46d97e214b464a80dd04856bce 485 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 33 478 1.6E-204 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 LK04_RS11695 d55ed56795face8d422f3201e12558be 203 PANTHER PTHR39322 1 180 5.7E-17 T 22-04-2016 LK04_RS11695 d55ed56795face8d422f3201e12558be 203 Gene3D G3DSA:3.40.630.30 1 175 3.6E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS11695 d55ed56795face8d422f3201e12558be 203 Pfam PF00765 Autoinducer synthase 10 99 2.5E-5 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LK04_RS11695 d55ed56795face8d422f3201e12558be 203 SUPERFAMILY SSF55729 11 177 1.11E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS11695 d55ed56795face8d422f3201e12558be 203 PRINTS PR01549 Autoinducer synthesis protein signature 18 37 1.0E-9 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LK04_RS11695 d55ed56795face8d422f3201e12558be 203 PRINTS PR01549 Autoinducer synthesis protein signature 153 170 1.0E-9 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LK04_RS11695 d55ed56795face8d422f3201e12558be 203 PRINTS PR01549 Autoinducer synthesis protein signature 65 83 1.0E-9 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LK04_RS11695 d55ed56795face8d422f3201e12558be 203 PRINTS PR01549 Autoinducer synthesis protein signature 109 130 1.0E-9 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LK04_RS11695 d55ed56795face8d422f3201e12558be 203 PRINTS PR01549 Autoinducer synthesis protein signature 41 63 1.0E-9 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LK04_RS06270 20dcf0813372712cdab8fedb63c101a5 254 SUPERFAMILY SSF52317 6 248 8.57E-37 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS06270 20dcf0813372712cdab8fedb63c101a5 254 Pfam PF07722 Peptidase C26 8 225 1.6E-63 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 LK04_RS06270 20dcf0813372712cdab8fedb63c101a5 254 PANTHER PTHR11922:SF18 27 253 2.5E-50 T 22-04-2016 LK04_RS06270 20dcf0813372712cdab8fedb63c101a5 254 PANTHER PTHR11922 27 253 2.5E-50 T 22-04-2016 LK04_RS06270 20dcf0813372712cdab8fedb63c101a5 254 Gene3D G3DSA:3.40.50.880 6 250 3.5E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 5.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 Gene3D G3DSA:3.40.50.720 7 248 3.5E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 SUPERFAMILY SSF51735 7 249 2.35E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 Pfam PF00106 short chain dehydrogenase 10 191 1.4E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 PANTHER PTHR24322 151 183 5.7E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 PANTHER PTHR24322 11 135 5.7E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.3E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.3E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.3E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06625 d020f3d65ac406cd4f111d1c5b3387ae 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.3E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10260 4eff5aa718cb3e8dc4a137eeaa76f4de 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 1.4E-88 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LK04_RS10260 4eff5aa718cb3e8dc4a137eeaa76f4de 365 SUPERFAMILY SSF51395 4 364 3.4E-115 T 22-04-2016 LK04_RS10260 4eff5aa718cb3e8dc4a137eeaa76f4de 365 PANTHER PTHR22893:SF14 1 365 5.0E-158 T 22-04-2016 LK04_RS10260 4eff5aa718cb3e8dc4a137eeaa76f4de 365 Gene3D G3DSA:3.20.20.70 4 364 3.7E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS10260 4eff5aa718cb3e8dc4a137eeaa76f4de 365 PANTHER PTHR22893 1 365 5.0E-158 T 22-04-2016 LK04_RS00795 139ae6c96737357f9d7c3949c3187b2b 64 Gene3D G3DSA:3.30.50.10 9 43 1.5E-4 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 LK04_RS00795 139ae6c96737357f9d7c3949c3187b2b 64 Pfam PF09526 Probable metal-binding protein (DUF2387) 1 56 8.2E-20 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 LK04_RS00795 139ae6c96737357f9d7c3949c3187b2b 64 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 58 2.7E-31 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 LK04_RS04565 988e9b512cadf3dbd99128315a87614e 389 SUPERFAMILY SSF56601 33 361 2.59E-65 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS04565 988e9b512cadf3dbd99128315a87614e 389 Gene3D G3DSA:3.40.710.10 30 370 4.8E-66 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS04565 988e9b512cadf3dbd99128315a87614e 389 Pfam PF00144 Beta-lactamase 45 357 1.5E-61 T 22-04-2016 IPR001466 Beta-lactamase-related LK04_RS04565 988e9b512cadf3dbd99128315a87614e 389 PANTHER PTHR22935 6 356 6.5E-68 T 22-04-2016 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 1.4E-134 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PANTHER PTHR10422 33 614 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 3.1E-93 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 SUPERFAMILY SSF81442 43 560 4.06E-176 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 PANTHER PTHR10422:SF26 33 614 0.0 T 22-04-2016 LK04_RS14010 cd235b0587caa22458bce9edf2792e28 660 Gene3D G3DSA:1.20.210.10 40 589 4.6E-186 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.6E-5 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.6E-5 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PANTHER PTHR11922:SF7 1 190 9.9E-95 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 5.5E-53 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 Gene3D G3DSA:3.40.50.880 2 190 6.5E-65 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 6.3E-86 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 SUPERFAMILY SSF52317 1 191 1.8E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.2E-14 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.2E-14 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.2E-14 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PANTHER PTHR11922 1 190 9.9E-95 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 5.9E-37 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.9E-37 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.9E-37 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.9E-37 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.9E-37 T 22-04-2016 LK04_RS00710 5c90d24b246e7e83d1f39ce50d8d4ffb 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.9E-37 T 22-04-2016 LK04_RS06735 73b4a6ce79f798aac6a9d606c90d8a8e 350 Gene3D G3DSA:3.40.1190.20 2 331 2.8E-57 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS06735 73b4a6ce79f798aac6a9d606c90d8a8e 350 PANTHER PTHR10584 1 331 7.7E-52 T 22-04-2016 LK04_RS06735 73b4a6ce79f798aac6a9d606c90d8a8e 350 SUPERFAMILY SSF53613 5 308 3.43E-52 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS06735 73b4a6ce79f798aac6a9d606c90d8a8e 350 PANTHER PTHR10584:SF166 1 331 7.7E-52 T 22-04-2016 LK04_RS06735 73b4a6ce79f798aac6a9d606c90d8a8e 350 Pfam PF00294 pfkB family carbohydrate kinase 25 312 1.4E-36 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS00120 31de8e23b0e2a51a635044fb28e8f1b9 305 PANTHER PTHR12304 2 303 1.7E-87 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LK04_RS00120 31de8e23b0e2a51a635044fb28e8f1b9 305 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 296 8.5E-71 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LK04_RS00120 31de8e23b0e2a51a635044fb28e8f1b9 305 Gene3D G3DSA:3.90.245.10 2 304 9.6E-91 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LK04_RS00120 31de8e23b0e2a51a635044fb28e8f1b9 305 SUPERFAMILY SSF53590 1 304 1.96E-79 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 SUPERFAMILY SSF50249 133 199 2.86E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Gene3D G3DSA:3.30.300.20 199 277 1.6E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Pfam PF08529 NusA N-terminal domain 4 123 1.5E-35 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 SUPERFAMILY SSF54814 201 278 2.75E-29 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 PANTHER PTHR22648:SF0 1 448 6.0E-187 T 22-04-2016 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Gene3D G3DSA:3.30.1480.10 1 124 3.2E-45 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Gene3D G3DSA:1.10.150.20 431 492 1.2E-23 T 22-04-2016 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 3.5E-129 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Gene3D G3DSA:1.10.150.20 357 414 5.0E-24 T 22-04-2016 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 7.3E-22 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.3E-16 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 PANTHER PTHR22648 1 448 6.0E-187 T 22-04-2016 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 SMART SM00316 133 200 1.5E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Gene3D G3DSA:2.40.50.140 128 197 3.1E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 SMART SM00322 230 293 17.0 T 22-04-2016 IPR004087 K Homology domain GO:0003676 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 SMART SM00322 301 364 0.081 T 22-04-2016 IPR004087 K Homology domain GO:0003676 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 SUPERFAMILY SSF47794 429 492 9.58E-18 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 SUPERFAMILY SSF47794 355 415 2.83E-17 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.8E-9 T 22-04-2016 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Pfam PF14520 Helix-hairpin-helix domain 367 411 7.6E-4 T 22-04-2016 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.051 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Pfam PF13184 NusA-like KH domain 230 297 1.1E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 SUPERFAMILY SSF54814 279 343 2.27E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 Gene3D G3DSA:3.30.300.20 278 346 4.3E-26 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LK04_RS16405 ad6729c13fd67deaffa9bf5f14de2991 495 SUPERFAMILY SSF69705 1 126 2.49E-39 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LK04_RS03300 9b5d5a165d769e1b81a31d30a8f0a88a 401 PANTHER PTHR11601 1 401 1.0E-241 T 22-04-2016 LK04_RS03300 9b5d5a165d769e1b81a31d30a8f0a88a 401 Gene3D G3DSA:3.40.640.10 32 280 2.2E-74 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS03300 9b5d5a165d769e1b81a31d30a8f0a88a 401 PANTHER PTHR11601:SF44 1 401 1.0E-241 T 22-04-2016 LK04_RS03300 9b5d5a165d769e1b81a31d30a8f0a88a 401 Gene3D G3DSA:3.90.1150.10 281 392 1.3E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS03300 9b5d5a165d769e1b81a31d30a8f0a88a 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 4.8E-214 T 22-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LK04_RS03300 9b5d5a165d769e1b81a31d30a8f0a88a 401 Pfam PF00266 Aminotransferase class-V 21 388 2.5E-136 T 22-04-2016 IPR000192 Aminotransferase class V domain LK04_RS03300 9b5d5a165d769e1b81a31d30a8f0a88a 401 SUPERFAMILY SSF53383 7 396 5.5E-108 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS03300 9b5d5a165d769e1b81a31d30a8f0a88a 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LK04_RS04385 5d9381eed8c33adc38a1b571e2ddc06c 270 PANTHER PTHR30193 1 270 2.8E-38 T 22-04-2016 LK04_RS04385 5d9381eed8c33adc38a1b571e2ddc06c 270 SUPERFAMILY SSF161098 2 259 5.51E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04385 5d9381eed8c33adc38a1b571e2ddc06c 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 263 1.6E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04385 5d9381eed8c33adc38a1b571e2ddc06c 270 Gene3D G3DSA:1.10.3720.10 10 259 4.4E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14975 fd4e99a76305d1e80b2fe13f01dc86f9 241 Pfam PF00696 Amino acid kinase family 11 219 3.3E-27 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS14975 fd4e99a76305d1e80b2fe13f01dc86f9 241 SUPERFAMILY SSF53633 7 240 2.88E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS14975 fd4e99a76305d1e80b2fe13f01dc86f9 241 PIRSF PIRSF005650 4 241 2.1E-89 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LK04_RS14975 fd4e99a76305d1e80b2fe13f01dc86f9 241 Gene3D G3DSA:3.40.1160.10 3 240 2.3E-85 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS14975 fd4e99a76305d1e80b2fe13f01dc86f9 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.3E-103 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LK04_RS14975 fd4e99a76305d1e80b2fe13f01dc86f9 241 PANTHER PTHR21499 4 240 6.5E-113 T 22-04-2016 LK04_RS14975 fd4e99a76305d1e80b2fe13f01dc86f9 241 PANTHER PTHR21499:SF23 4 240 6.5E-113 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LK04_RS14975 fd4e99a76305d1e80b2fe13f01dc86f9 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.824 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LK04_RS14900 48976202ab17089419781b95293be7ed 716 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LK04_RS14900 48976202ab17089419781b95293be7ed 716 PANTHER PTHR11751:SF406 483 491 2.0E-246 T 22-04-2016 LK04_RS14900 48976202ab17089419781b95293be7ed 716 PANTHER PTHR11751:SF406 511 631 2.0E-246 T 22-04-2016 LK04_RS14900 48976202ab17089419781b95293be7ed 716 Gene3D G3DSA:3.90.1150.10 426 587 1.8E-61 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS14900 48976202ab17089419781b95293be7ed 716 SUPERFAMILY SSF55904 568 709 1.7E-42 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LK04_RS14900 48976202ab17089419781b95293be7ed 716 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 3.2E-27 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 LK04_RS14900 48976202ab17089419781b95293be7ed 716 PANTHER PTHR11751 131 459 2.0E-246 T 22-04-2016 LK04_RS14900 48976202ab17089419781b95293be7ed 716 PANTHER PTHR11751 483 491 2.0E-246 T 22-04-2016 LK04_RS14900 48976202ab17089419781b95293be7ed 716 PANTHER PTHR11751 511 631 2.0E-246 T 22-04-2016 LK04_RS14900 48976202ab17089419781b95293be7ed 716 Gene3D G3DSA:3.90.100.10 588 711 1.1E-35 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LK04_RS14900 48976202ab17089419781b95293be7ed 716 Gene3D G3DSA:3.40.640.10 130 423 1.0E-99 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS14900 48976202ab17089419781b95293be7ed 716 PIRSF PIRSF009393 1 713 8.4E-272 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 LK04_RS14900 48976202ab17089419781b95293be7ed 716 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 571 700 1.3E-44 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LK04_RS14900 48976202ab17089419781b95293be7ed 716 SUPERFAMILY SSF53383 130 563 2.68E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS14900 48976202ab17089419781b95293be7ed 716 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 546 3.2E-186 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LK04_RS14900 48976202ab17089419781b95293be7ed 716 PANTHER PTHR11751:SF406 131 459 2.0E-246 T 22-04-2016 LK04_RS13310 126f21a5d7fd72f7938c06526598e3a2 157 SUPERFAMILY SSF55486 3 151 5.37E-51 T 22-04-2016 LK04_RS13310 126f21a5d7fd72f7938c06526598e3a2 157 Gene3D G3DSA:3.40.390.30 14 154 5.6E-53 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 LK04_RS13310 126f21a5d7fd72f7938c06526598e3a2 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 4.1E-38 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LK04_RS13310 126f21a5d7fd72f7938c06526598e3a2 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site LK04_RS13310 126f21a5d7fd72f7938c06526598e3a2 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 25.055 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LK04_RS13310 126f21a5d7fd72f7938c06526598e3a2 157 PANTHER PTHR22881 1 156 1.5E-73 T 22-04-2016 LK04_RS13310 126f21a5d7fd72f7938c06526598e3a2 157 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 8.8E-41 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LK04_RS07240 65463245a2bb4667c26303956bdd62e0 284 PANTHER PTHR21057 1 284 4.9E-227 T 22-04-2016 LK04_RS07240 65463245a2bb4667c26303956bdd62e0 284 Pfam PF00793 DAHP synthetase I family 10 275 3.2E-68 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LK04_RS07240 65463245a2bb4667c26303956bdd62e0 284 Gene3D G3DSA:3.20.20.70 18 281 4.7E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS07240 65463245a2bb4667c26303956bdd62e0 284 PANTHER PTHR21057:SF6 1 284 4.9E-227 T 22-04-2016 LK04_RS07240 65463245a2bb4667c26303956bdd62e0 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.374 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LK04_RS07240 65463245a2bb4667c26303956bdd62e0 284 SUPERFAMILY SSF51569 3 278 1.92E-103 T 22-04-2016 LK04_RS07240 65463245a2bb4667c26303956bdd62e0 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.0E-118 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LK04_RS07305 46fbfe71239242185f351d546da04bc3 291 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 84 279 4.2E-71 T 22-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 LK04_RS07305 46fbfe71239242185f351d546da04bc3 291 PANTHER PTHR30151 25 283 3.3E-88 T 22-04-2016 LK04_RS07305 46fbfe71239242185f351d546da04bc3 291 Gene3D G3DSA:1.10.3720.10 92 287 2.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS07305 46fbfe71239242185f351d546da04bc3 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 283 2.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS07305 46fbfe71239242185f351d546da04bc3 291 PANTHER PTHR30151:SF7 25 283 3.3E-88 T 22-04-2016 LK04_RS07305 46fbfe71239242185f351d546da04bc3 291 SUPERFAMILY SSF161098 94 277 2.75E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.0E-44 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.6E-28 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 SMART SM00490 270 351 4.9E-31 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 Gene3D G3DSA:3.40.50.300 8 223 3.8E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 PANTHER PTHR24031 1 428 2.2E-273 T 22-04-2016 LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 PANTHER PTHR24031:SF173 1 428 2.2E-273 T 22-04-2016 LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 SUPERFAMILY SSF52540 84 363 2.91E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 SMART SM00487 28 234 2.8E-52 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 Gene3D G3DSA:3.40.50.300 224 383 5.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18200 a4e9c268e41fba85237cb66111d25356 431 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 51.192 T 22-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 LK04_RS01410 9511f261b6ded04acc2733fb750be2fc 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 22-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS01410 9511f261b6ded04acc2733fb750be2fc 131 Pfam PF01250 Ribosomal protein S6 3 91 3.2E-27 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS01410 9511f261b6ded04acc2733fb750be2fc 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.621 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS01410 9511f261b6ded04acc2733fb750be2fc 131 SUPERFAMILY SSF54995 1 103 2.09E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS01410 9511f261b6ded04acc2733fb750be2fc 131 PANTHER PTHR21011:SF1 1 131 6.4E-50 T 22-04-2016 LK04_RS01410 9511f261b6ded04acc2733fb750be2fc 131 Gene3D G3DSA:3.30.70.60 1 103 8.9E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LK04_RS01410 9511f261b6ded04acc2733fb750be2fc 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 7.5E-38 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS01410 9511f261b6ded04acc2733fb750be2fc 131 PANTHER PTHR21011 1 131 6.4E-50 T 22-04-2016 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 Pfam PF00267 Gram-negative porin 28 369 1.1E-135 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PANTHER PTHR34501 3 369 2.1E-211 T 22-04-2016 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 53 64 1.1E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 157 168 1.1E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 321 338 1.1E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 231 243 1.1E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 99 109 1.1E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PANTHER PTHR34501:SF4 3 369 2.1E-211 T 22-04-2016 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 SUPERFAMILY SSF56935 23 369 1.31E-75 T 22-04-2016 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 1.7E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 99 121 1.7E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 237 254 1.7E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 155 177 1.7E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 52 70 1.7E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 268 287 1.7E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 321 337 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site LK04_RS11980 e49810dfbac90c4e2373cb304337d9b9 369 Gene3D G3DSA:2.40.160.10 23 369 7.4E-95 T 22-04-2016 IPR023614 Porin domain LK04_RS00815 948f52178d09515bb1cd7857b0f1b65e 240 PANTHER PTHR35568:SF3 10 237 1.7E-172 T 22-04-2016 LK04_RS00815 948f52178d09515bb1cd7857b0f1b65e 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 6.0E-64 T 22-04-2016 IPR013559 YheO-like LK04_RS00815 948f52178d09515bb1cd7857b0f1b65e 240 Pfam PF13309 HTH domain 171 228 4.4E-19 T 22-04-2016 LK04_RS00815 948f52178d09515bb1cd7857b0f1b65e 240 Pfam PF08348 YheO-like PAS domain 29 137 4.4E-36 T 22-04-2016 IPR013559 YheO-like LK04_RS00815 948f52178d09515bb1cd7857b0f1b65e 240 PANTHER PTHR35568 10 237 1.7E-172 T 22-04-2016 LK04_RS15030 e617868639751623059bca32d6d777d0 497 Gene3D G3DSA:1.10.3410.10 262 382 2.1E-30 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain LK04_RS15030 e617868639751623059bca32d6d777d0 497 SMART SM00471 62 275 3.0E-10 T 22-04-2016 IPR003607 HD/PDEase domain LK04_RS15030 e617868639751623059bca32d6d777d0 497 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 497 49.86 T 22-04-2016 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 LK04_RS15030 e617868639751623059bca32d6d777d0 497 Gene3D G3DSA:1.10.3550.10 124 162 1.4E-34 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain LK04_RS15030 e617868639751623059bca32d6d777d0 497 Gene3D G3DSA:1.10.3550.10 383 496 1.4E-34 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain LK04_RS15030 e617868639751623059bca32d6d777d0 497 PANTHER PTHR11373:SF29 175 497 6.0E-78 T 22-04-2016 LK04_RS15030 e617868639751623059bca32d6d777d0 497 PANTHER PTHR11373:SF29 23 143 6.0E-78 T 22-04-2016 LK04_RS15030 e617868639751623059bca32d6d777d0 497 PANTHER PTHR11373 175 497 6.0E-78 T 22-04-2016 LK04_RS15030 e617868639751623059bca32d6d777d0 497 PANTHER PTHR11373 23 143 6.0E-78 T 22-04-2016 LK04_RS15030 e617868639751623059bca32d6d777d0 497 SUPERFAMILY SSF109604 476 494 2.2E-62 T 22-04-2016 LK04_RS15030 e617868639751623059bca32d6d777d0 497 SUPERFAMILY SSF109604 244 424 2.2E-62 T 22-04-2016 LK04_RS15030 e617868639751623059bca32d6d777d0 497 SUPERFAMILY SSF109604 175 208 2.2E-62 T 22-04-2016 LK04_RS15030 e617868639751623059bca32d6d777d0 497 SUPERFAMILY SSF109604 30 135 2.2E-62 T 22-04-2016 LK04_RS15030 e617868639751623059bca32d6d777d0 497 Gene3D G3DSA:1.10.3210.10 4 123 2.5E-62 T 22-04-2016 IPR006674 HD domain LK04_RS15030 e617868639751623059bca32d6d777d0 497 Gene3D G3DSA:1.10.3210.10 176 261 2.5E-62 T 22-04-2016 IPR006674 HD domain LK04_RS15030 e617868639751623059bca32d6d777d0 497 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 495 8.4E-122 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 LK04_RS15030 e617868639751623059bca32d6d777d0 497 Pfam PF13286 Phosphohydrolase-associated domain 433 492 6.6E-7 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain LK04_RS15030 e617868639751623059bca32d6d777d0 497 Pfam PF01966 HD domain 66 135 1.5E-9 T 22-04-2016 IPR006674 HD domain LK04_RS11455 1366c0e04940cb7ea9ce92c99ff28242 348 PIRSF PIRSF001237 4 348 5.8E-141 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS11455 1366c0e04940cb7ea9ce92c99ff28242 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS11455 1366c0e04940cb7ea9ce92c99ff28242 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS11455 1366c0e04940cb7ea9ce92c99ff28242 348 PANTHER PTHR11647:SF59 1 346 5.2E-151 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS11455 1366c0e04940cb7ea9ce92c99ff28242 348 SUPERFAMILY SSF51556 6 346 2.53E-145 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS11455 1366c0e04940cb7ea9ce92c99ff28242 348 PANTHER PTHR11647 1 346 5.2E-151 T 22-04-2016 LK04_RS11455 1366c0e04940cb7ea9ce92c99ff28242 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 7 347 2.1E-149 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS11455 1366c0e04940cb7ea9ce92c99ff28242 348 Gene3D G3DSA:3.20.20.140 6 347 2.1E-130 T 22-04-2016 LK04_RS11455 1366c0e04940cb7ea9ce92c99ff28242 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 55.093 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS11455 1366c0e04940cb7ea9ce92c99ff28242 348 Pfam PF01979 Amidohydrolase family 15 314 9.2E-20 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LK04_RS11770 c711e03cb4bb7c8fe7cedc022d6f3937 199 Gene3D G3DSA:3.40.50.360 1 198 2.3E-73 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS11770 c711e03cb4bb7c8fe7cedc022d6f3937 199 PANTHER PTHR30546:SF10 1 198 2.9E-122 T 22-04-2016 LK04_RS11770 c711e03cb4bb7c8fe7cedc022d6f3937 199 SUPERFAMILY SSF52218 1 198 7.21E-61 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS11770 c711e03cb4bb7c8fe7cedc022d6f3937 199 Pfam PF03358 NADPH-dependent FMN reductase 4 142 5.3E-14 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 LK04_RS11770 c711e03cb4bb7c8fe7cedc022d6f3937 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 2.3E-93 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 LK04_RS11770 c711e03cb4bb7c8fe7cedc022d6f3937 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 38.642 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 LK04_RS11770 c711e03cb4bb7c8fe7cedc022d6f3937 199 PANTHER PTHR30546 1 198 2.9E-122 T 22-04-2016 LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 Pfam PF03472 Autoinducer binding domain 25 158 2.4E-28 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 SMART SM00421 177 234 4.0E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 SUPERFAMILY SSF75516 8 169 2.75E-31 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 Gene3D G3DSA:3.30.450.80 9 182 7.1E-34 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 2.1E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 2.1E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 2.1E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 Gene3D G3DSA:1.10.10.10 183 240 6.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 SUPERFAMILY SSF46894 172 240 2.82E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 PANTHER PTHR26402 43 240 8.5E-29 T 22-04-2016 LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 PANTHER PTHR26402:SF432 43 240 8.5E-29 T 22-04-2016 LK04_RS11700 a05f02575e496b6e5140b00f673658cf 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 180 234 2.8E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS19300 f3e551ff00a57a49fa3e6a3958f43da4 131 SUPERFAMILY SSF55961 1 128 2.04E-26 T 22-04-2016 LK04_RS19300 f3e551ff00a57a49fa3e6a3958f43da4 131 Gene3D G3DSA:3.30.530.20 2 129 1.6E-47 T 22-04-2016 IPR023393 START-like domain LK04_RS16825 7c1f26dcf8690850decdbfb49ff676f3 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LK04_RS16825 7c1f26dcf8690850decdbfb49ff676f3 400 PANTHER PTHR11751:SF306 14 395 3.7E-143 T 22-04-2016 LK04_RS16825 7c1f26dcf8690850decdbfb49ff676f3 400 PANTHER PTHR11751 14 395 3.7E-143 T 22-04-2016 LK04_RS16825 7c1f26dcf8690850decdbfb49ff676f3 400 Gene3D G3DSA:3.40.640.10 44 275 9.8E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS16825 7c1f26dcf8690850decdbfb49ff676f3 400 SUPERFAMILY SSF53383 1 397 6.25E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS16825 7c1f26dcf8690850decdbfb49ff676f3 400 Gene3D G3DSA:3.90.1150.10 276 398 1.6E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS16825 7c1f26dcf8690850decdbfb49ff676f3 400 Pfam PF00155 Aminotransferase class I and II 32 392 4.9E-73 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 Gene3D G3DSA:1.10.287.180 1 75 2.9E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 SUPERFAMILY SSF46557 3 77 2.75E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 PANTHER PTHR30437 1 162 9.4E-84 T 22-04-2016 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 159 5.3E-77 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 9.3E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 PANTHER PTHR30437:SF6 1 162 9.4E-84 T 22-04-2016 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 158 51.233 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 SUPERFAMILY SSF54534 80 157 2.09E-19 T 22-04-2016 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 27.499 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 Gene3D G3DSA:3.10.50.30 76 157 2.3E-26 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 PIRSF PIRSF006092 1 159 1.6E-45 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 LK04_RS00555 3910f76efd68237b6640db2a40692801 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 157 7.7E-23 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LK04_RS17215 ae72837f669039fb97b4282137f95df6 220 PANTHER PTHR11260:SF282 1 219 8.0E-92 T 22-04-2016 LK04_RS17215 ae72837f669039fb97b4282137f95df6 220 PANTHER PTHR11260 1 219 8.0E-92 T 22-04-2016 LK04_RS17215 ae72837f669039fb97b4282137f95df6 220 Pfam PF00043 Glutathione S-transferase, C-terminal domain 152 204 1.5E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal LK04_RS17215 ae72837f669039fb97b4282137f95df6 220 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 9.8E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS17215 ae72837f669039fb97b4282137f95df6 220 SUPERFAMILY SSF47616 86 216 9.41E-21 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS17215 ae72837f669039fb97b4282137f95df6 220 Gene3D G3DSA:3.40.30.10 2 89 3.5E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS17215 ae72837f669039fb97b4282137f95df6 220 SUPERFAMILY SSF52833 1 81 9.97E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS17215 ae72837f669039fb97b4282137f95df6 220 Gene3D G3DSA:1.20.1050.10 90 211 1.4E-23 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS15230 3a76b6bce739bd66b9401b1f4326533e 311 Pfam PF05229 Spore Coat Protein U domain 181 308 1.2E-25 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS15230 3a76b6bce739bd66b9401b1f4326533e 311 Pfam PF05229 Spore Coat Protein U domain 17 159 2.5E-20 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS15230 3a76b6bce739bd66b9401b1f4326533e 311 SMART SM00972 94 159 7.3E-17 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS15230 3a76b6bce739bd66b9401b1f4326533e 311 SMART SM00972 254 308 1.4E-12 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS15230 3a76b6bce739bd66b9401b1f4326533e 311 PANTHER PTHR37089 4 311 4.1E-80 T 22-04-2016 LK04_RS15230 3a76b6bce739bd66b9401b1f4326533e 311 PANTHER PTHR37089:SF1 4 311 4.1E-80 T 22-04-2016 LK04_RS12880 d686ffc7ea46dadc9b78c6af74be6a66 251 SUPERFAMILY SSF53335 10 247 1.52E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS12880 d686ffc7ea46dadc9b78c6af74be6a66 251 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 251 2.3E-66 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 LK04_RS12880 d686ffc7ea46dadc9b78c6af74be6a66 251 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 251 29.107 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 LK04_RS12880 d686ffc7ea46dadc9b78c6af74be6a66 251 Gene3D G3DSA:3.40.50.150 9 244 1.6E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS12880 d686ffc7ea46dadc9b78c6af74be6a66 251 PANTHER PTHR10108 12 193 2.5E-43 T 22-04-2016 LK04_RS12880 d686ffc7ea46dadc9b78c6af74be6a66 251 PANTHER PTHR10108:SF855 12 193 2.5E-43 T 22-04-2016 LK04_RS12880 d686ffc7ea46dadc9b78c6af74be6a66 251 Pfam PF08241 Methyltransferase domain 48 139 1.8E-24 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 420 429 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 Pfam PF00989 PAS fold 82 154 6.9E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 293 308 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 SUPERFAMILY SSF46689 461 514 1.43E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 SUPERFAMILY SSF55021 2 69 1.29E-5 T 22-04-2016 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 Gene3D G3DSA:3.30.450.20 76 164 1.6E-9 T 22-04-2016 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 231 244 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 467 514 3.2E-28 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 Gene3D G3DSA:3.30.70.260 2 68 5.0E-4 T 22-04-2016 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 PANTHER PTHR32071 8 521 6.4E-214 T 22-04-2016 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 SMART SM00382 227 371 2.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 Pfam PF00158 Sigma-54 interaction domain 208 373 1.9E-61 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 SUPERFAMILY SSF55785 83 172 4.95E-7 T 22-04-2016 IPR000014 PAS domain LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 Gene3D G3DSA:1.10.8.60 380 450 3.0E-20 T 22-04-2016 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 Gene3D G3DSA:3.40.50.300 203 379 1.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 SMART SM00091 80 146 6.1E-6 T 22-04-2016 IPR000014 PAS domain LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 PANTHER PTHR32071:SF3 8 521 6.4E-214 T 22-04-2016 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 Gene3D G3DSA:1.10.10.60 458 514 2.4E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08425 ef5ae622e14572c63795cee62ca1ab89 521 SUPERFAMILY SSF52540 207 448 2.56E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00755 6baa836254a598c9b377bc516db6606b 326 Gene3D G3DSA:3.40.50.2300 57 166 1.7E-31 T 22-04-2016 LK04_RS00755 6baa836254a598c9b377bc516db6606b 326 SMART SM00354 1 70 2.1E-30 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS00755 6baa836254a598c9b377bc516db6606b 326 Gene3D G3DSA:1.10.260.40 1 56 9.2E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS00755 6baa836254a598c9b377bc516db6606b 326 Gene3D G3DSA:3.40.50.2300 167 325 6.8E-55 T 22-04-2016 LK04_RS00755 6baa836254a598c9b377bc516db6606b 326 SUPERFAMILY SSF53822 61 325 8.16E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS00755 6baa836254a598c9b377bc516db6606b 326 PANTHER PTHR30146 1 326 4.4E-103 T 22-04-2016 LK04_RS00755 6baa836254a598c9b377bc516db6606b 326 Pfam PF13377 Periplasmic binding protein-like domain 166 326 3.7E-35 T 22-04-2016 LK04_RS00755 6baa836254a598c9b377bc516db6606b 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 1.0E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS00755 6baa836254a598c9b377bc516db6606b 326 SUPERFAMILY SSF47413 2 58 1.74E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS08085 0083181ac51fdb092af065b6facd167c 206 Pfam PF00265 Thymidine kinase 2 186 2.2E-63 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 LK04_RS08085 0083181ac51fdb092af065b6facd167c 206 PANTHER PTHR11441 1 199 1.6E-84 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 LK04_RS08085 0083181ac51fdb092af065b6facd167c 206 Gene3D G3DSA:3.30.60.20 142 190 3.5E-21 T 22-04-2016 LK04_RS08085 0083181ac51fdb092af065b6facd167c 206 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.6 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 LK04_RS08085 0083181ac51fdb092af065b6facd167c 206 PIRSF PIRSF035805 1 197 3.0E-57 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 LK04_RS08085 0083181ac51fdb092af065b6facd167c 206 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 LK04_RS08085 0083181ac51fdb092af065b6facd167c 206 SUPERFAMILY SSF57716 142 190 1.71E-17 T 22-04-2016 LK04_RS08085 0083181ac51fdb092af065b6facd167c 206 SUPERFAMILY SSF52540 1 141 3.99E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10070 3c86713aa08359fa9815c4d9df001f83 558 SUPERFAMILY SSF53067 7 287 7.22E-21 T 22-04-2016 LK04_RS10070 3c86713aa08359fa9815c4d9df001f83 558 Gene3D G3DSA:3.30.420.40 6 285 7.3E-31 T 22-04-2016 LK04_RS10070 3c86713aa08359fa9815c4d9df001f83 558 PANTHER PTHR10196:SF62 6 558 0.0 T 22-04-2016 LK04_RS10070 3c86713aa08359fa9815c4d9df001f83 558 Gene3D G3DSA:3.30.420.40 288 550 2.1E-43 T 22-04-2016 LK04_RS10070 3c86713aa08359fa9815c4d9df001f83 558 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 294 504 6.0E-37 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LK04_RS10070 3c86713aa08359fa9815c4d9df001f83 558 Hamap MF_00520 Ribulokinase [araB]. 4 558 51.059 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 LK04_RS10070 3c86713aa08359fa9815c4d9df001f83 558 PANTHER PTHR10196 6 558 0.0 T 22-04-2016 LK04_RS10070 3c86713aa08359fa9815c4d9df001f83 558 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 5 550 3.7E-225 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 LK04_RS10070 3c86713aa08359fa9815c4d9df001f83 558 SUPERFAMILY SSF53067 288 551 1.12E-41 T 22-04-2016 LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 Gene3D G3DSA:1.10.10.10 8 67 2.0E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 Gene3D G3DSA:3.40.1410.10 68 239 1.5E-34 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 SUPERFAMILY SSF64288 92 236 2.83E-28 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 3.8E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 PANTHER PTHR11751:SF333 124 148 2.3E-14 T 22-04-2016 LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 PANTHER PTHR11751:SF333 14 73 2.3E-14 T 22-04-2016 LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 SUPERFAMILY SSF46785 9 79 1.11E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 PANTHER PTHR11751 124 148 2.3E-14 T 22-04-2016 LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 PANTHER PTHR11751 14 73 2.3E-14 T 22-04-2016 LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 Pfam PF07702 UTRA domain 103 231 8.6E-22 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 SMART SM00345 12 71 2.9E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS02695 0adcc590ac73f633361901d0fdd56cbe 244 SMART SM00866 95 236 9.2E-15 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LK04_RS09215 e5b67618fed91be6d39443ef5e6143fa 223 PIRSF PIRSF029287 1 214 4.8E-44 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 LK04_RS09215 e5b67618fed91be6d39443ef5e6143fa 223 Gene3D G3DSA:3.40.1730.10 5 210 9.7E-59 T 22-04-2016 LK04_RS09215 e5b67618fed91be6d39443ef5e6143fa 223 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 8 136 2.8E-28 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 LK04_RS09215 e5b67618fed91be6d39443ef5e6143fa 223 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 8 136 7.3E-38 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 LK04_RS18875 a2b662d5e88720073e93c9b9dac0d7ec 482 SUPERFAMILY SSF46785 10 87 2.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18875 a2b662d5e88720073e93c9b9dac0d7ec 482 PANTHER PTHR11751 138 473 1.1E-108 T 22-04-2016 LK04_RS18875 a2b662d5e88720073e93c9b9dac0d7ec 482 Gene3D G3DSA:3.90.1150.10 337 475 7.1E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS18875 a2b662d5e88720073e93c9b9dac0d7ec 482 Gene3D G3DSA:1.10.10.10 8 78 3.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18875 a2b662d5e88720073e93c9b9dac0d7ec 482 SMART SM00345 18 77 1.9E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18875 a2b662d5e88720073e93c9b9dac0d7ec 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 1.1E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18875 a2b662d5e88720073e93c9b9dac0d7ec 482 Gene3D G3DSA:3.40.640.10 157 336 1.5E-39 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS18875 a2b662d5e88720073e93c9b9dac0d7ec 482 SUPERFAMILY SSF53383 117 475 1.11E-76 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS18875 a2b662d5e88720073e93c9b9dac0d7ec 482 Pfam PF00155 Aminotransferase class I and II 150 470 1.4E-27 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS18875 a2b662d5e88720073e93c9b9dac0d7ec 482 PANTHER PTHR11751:SF314 138 473 1.1E-108 T 22-04-2016 LK04_RS10685 e77e32b1fb1858d4cbae57593bef2f02 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 239 4.2E-10 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LK04_RS10685 e77e32b1fb1858d4cbae57593bef2f02 295 PANTHER PTHR30433:SF4 1 289 9.4E-186 T 22-04-2016 IPR022522 Flagellar motor stator, MotA LK04_RS10685 e77e32b1fb1858d4cbae57593bef2f02 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site LK04_RS10685 e77e32b1fb1858d4cbae57593bef2f02 295 PANTHER PTHR30433 1 289 9.4E-186 T 22-04-2016 LK04_RS10685 e77e32b1fb1858d4cbae57593bef2f02 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 5.8E-120 T 22-04-2016 IPR022522 Flagellar motor stator, MotA LK04_RS09435 1714046f4bbcbe302e8458d401f402b2 245 Pfam PF00005 ABC transporter 23 167 2.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS09435 1714046f4bbcbe302e8458d401f402b2 245 Gene3D G3DSA:3.40.50.300 1 240 2.9E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09435 1714046f4bbcbe302e8458d401f402b2 245 SUPERFAMILY SSF52540 1 230 1.25E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09435 1714046f4bbcbe302e8458d401f402b2 245 PANTHER PTHR24220:SF336 3 242 1.4E-94 T 22-04-2016 LK04_RS09435 1714046f4bbcbe302e8458d401f402b2 245 SMART SM00382 30 216 7.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS09435 1714046f4bbcbe302e8458d401f402b2 245 PANTHER PTHR24220 3 242 1.4E-94 T 22-04-2016 LK04_RS09435 1714046f4bbcbe302e8458d401f402b2 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Pfam PF01584 CheW-like domain 517 643 9.7E-26 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Gene3D G3DSA:1.20.120.160 3 140 2.8E-40 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Pfam PF01627 Hpt domain 8 104 1.0E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 SMART SM01231 264 327 1.9E-21 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 264 327 2.0E-17 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 PANTHER PTHR22617 1 643 1.5E-294 T 22-04-2016 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Gene3D G3DSA:2.40.50.180 536 599 1.5E-14 T 22-04-2016 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 SUPERFAMILY SSF50341 511 643 4.97E-31 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 511 1.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Gene3D G3DSA:1.10.287.560 264 328 3.2E-23 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 SUPERFAMILY SSF47226 5 126 1.18E-31 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 SMART SM00260 504 644 2.8E-42 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Gene3D G3DSA:3.30.565.10 329 511 7.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 SUPERFAMILY SSF55052 155 218 1.36E-15 T 22-04-2016 IPR015162 CheY binding LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 SUPERFAMILY SSF47384 265 328 3.84E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Pfam PF09078 CheY binding 156 217 2.4E-19 T 22-04-2016 IPR015162 CheY binding LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 SMART SM00387 372 512 5.0E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Gene3D G3DSA:3.30.70.400 153 218 2.6E-24 T 22-04-2016 IPR015162 CheY binding LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 SUPERFAMILY SSF55874 330 510 2.36E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 SMART SM00073 5 102 9.9E-32 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 509 3.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 490 3.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 3.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 3.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 PANTHER PTHR22617:SF20 1 643 1.5E-294 T 22-04-2016 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Gene3D G3DSA:2.30.30.40 512 533 8.1E-25 T 22-04-2016 LK04_RS10675 adab3b5b2f30d88a8931ddd11823c100 657 Gene3D G3DSA:2.30.30.40 600 643 8.1E-25 T 22-04-2016 LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 122 133 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 403 50.346 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 396 3.0E-134 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 PANTHER PTHR11587:SF6 6 405 3.6E-270 T 22-04-2016 LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 SUPERFAMILY SSF52402 7 172 4.19E-44 T 22-04-2016 LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 Gene3D G3DSA:3.40.50.620 7 175 2.6E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 Gene3D G3DSA:3.90.1260.10 180 404 2.1E-89 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 PANTHER PTHR11587 6 405 3.6E-270 T 22-04-2016 LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 Pfam PF00764 Arginosuccinate synthase 10 397 3.8E-140 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19670 5208e674959dacc66f734b025c7e6e87 405 SUPERFAMILY SSF69864 177 403 6.41E-87 T 22-04-2016 LK04_RS16580 4466724d889a9e542bedc5ac64665a0c 210 PANTHER PTHR36573 1 210 2.1E-75 T 22-04-2016 LK04_RS16580 4466724d889a9e542bedc5ac64665a0c 210 PIRSF PIRSF004649 1 210 1.7E-59 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC LK04_RS16580 4466724d889a9e542bedc5ac64665a0c 210 Gene3D G3DSA:1.10.10.640 172 202 1.6E-21 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical LK04_RS16580 4466724d889a9e542bedc5ac64665a0c 210 Gene3D G3DSA:1.10.10.640 70 110 1.6E-21 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical LK04_RS16580 4466724d889a9e542bedc5ac64665a0c 210 Pfam PF05494 MlaC protein 32 197 3.1E-52 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC LK04_RS16580 4466724d889a9e542bedc5ac64665a0c 210 Gene3D G3DSA:3.10.450.50 113 171 6.7E-17 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS16580 4466724d889a9e542bedc5ac64665a0c 210 Gene3D G3DSA:3.10.450.50 25 69 6.7E-17 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS02845 e7cafb0a7319803bec20f7e742060d49 1177 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 504 628 2.5E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS02845 e7cafb0a7319803bec20f7e742060d49 1177 SUPERFAMILY SSF56784 439 665 1.92E-7 T 22-04-2016 IPR023214 HAD-like domain LK04_RS02845 e7cafb0a7319803bec20f7e742060d49 1177 Gene3D G3DSA:3.40.50.1000 537 643 1.3E-11 T 22-04-2016 IPR023214 HAD-like domain LK04_RS02845 e7cafb0a7319803bec20f7e742060d49 1177 Gene3D G3DSA:3.40.50.1000 438 455 1.3E-11 T 22-04-2016 IPR023214 HAD-like domain LK04_RS12700 e7d7e3c52d2a145bcaf1e2ab3ba23b09 631 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 441 629 1.4E-57 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS12700 e7d7e3c52d2a145bcaf1e2ab3ba23b09 631 Gene3D G3DSA:3.30.450.20 161 305 2.6E-11 T 22-04-2016 LK04_RS12700 e7d7e3c52d2a145bcaf1e2ab3ba23b09 631 Pfam PF00672 HAMP domain 315 378 2.2E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS12700 e7d7e3c52d2a145bcaf1e2ab3ba23b09 631 Pfam PF02743 Cache domain 44 290 1.7E-26 T 22-04-2016 IPR033479 Double Cache domain 1 LK04_RS12700 e7d7e3c52d2a145bcaf1e2ab3ba23b09 631 PANTHER PTHR32089:SF63 297 631 2.0E-136 T 22-04-2016 LK04_RS12700 e7d7e3c52d2a145bcaf1e2ab3ba23b09 631 PANTHER PTHR32089 297 631 2.0E-136 T 22-04-2016 LK04_RS12700 e7d7e3c52d2a145bcaf1e2ab3ba23b09 631 SMART SM00283 383 630 4.3E-79 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS12700 e7d7e3c52d2a145bcaf1e2ab3ba23b09 631 Gene3D G3DSA:1.10.287.950 398 602 9.0E-59 T 22-04-2016 LK04_RS12700 e7d7e3c52d2a145bcaf1e2ab3ba23b09 631 SUPERFAMILY SSF58104 350 631 2.22E-71 T 22-04-2016 LK04_RS12700 e7d7e3c52d2a145bcaf1e2ab3ba23b09 631 SMART SM00304 328 382 6.8E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS07570 5d40cce6168f254652f64bd4ff54dd7d 302 PANTHER PTHR35862 1 302 8.9E-130 T 22-04-2016 LK04_RS07570 5d40cce6168f254652f64bd4ff54dd7d 302 PANTHER PTHR35862:SF1 1 302 8.9E-130 T 22-04-2016 LK04_RS07570 5d40cce6168f254652f64bd4ff54dd7d 302 Pfam PF04865 Baseplate J-like protein 118 261 3.7E-24 T 22-04-2016 IPR006949 Baseplate protein J-like LK04_RS07570 5d40cce6168f254652f64bd4ff54dd7d 302 PIRSF PIRSF020481 1 302 3.5E-127 T 22-04-2016 IPR014507 Baseplate assembly protein J, predicted LK04_RS19450 0623b2e43fd1d1f8edb124ab18c1cab3 402 Gene3D G3DSA:3.40.640.10 61 278 2.2E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS19450 0623b2e43fd1d1f8edb124ab18c1cab3 402 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 52.7 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 LK04_RS19450 0623b2e43fd1d1f8edb124ab18c1cab3 402 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 5.1E-210 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 LK04_RS19450 0623b2e43fd1d1f8edb124ab18c1cab3 402 SUPERFAMILY SSF53383 4 396 9.63E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS19450 0623b2e43fd1d1f8edb124ab18c1cab3 402 Gene3D G3DSA:3.90.1150.10 279 393 3.4E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS19450 0623b2e43fd1d1f8edb124ab18c1cab3 402 PANTHER PTHR13693 1 397 5.3E-253 T 22-04-2016 LK04_RS19450 0623b2e43fd1d1f8edb124ab18c1cab3 402 PANTHER PTHR13693:SF60 1 397 5.3E-253 T 22-04-2016 LK04_RS19450 0623b2e43fd1d1f8edb124ab18c1cab3 402 Pfam PF00155 Aminotransferase class I and II 43 386 1.3E-73 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS19450 0623b2e43fd1d1f8edb124ab18c1cab3 402 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 LK04_RS15800 71205b6271bd5f680f4fcf61f274c6b0 164 PIRSF PIRSF028301 1 164 7.3E-55 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 LK04_RS15800 71205b6271bd5f680f4fcf61f274c6b0 164 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 158 2.8E-53 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 LK04_RS15800 71205b6271bd5f680f4fcf61f274c6b0 164 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 3.9E-55 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 LK04_RS15800 71205b6271bd5f680f4fcf61f274c6b0 164 PANTHER PTHR35850:SF2 1 163 2.5E-76 T 22-04-2016 LK04_RS15800 71205b6271bd5f680f4fcf61f274c6b0 164 PANTHER PTHR35850 1 163 2.5E-76 T 22-04-2016 LK04_RS00910 b2e9e06df915a792139048e58212de79 62 SUPERFAMILY SSF46561 1 61 1.31E-21 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00910 b2e9e06df915a792139048e58212de79 62 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.642 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00910 b2e9e06df915a792139048e58212de79 62 Pfam PF00831 Ribosomal L29 protein 4 60 2.7E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00910 b2e9e06df915a792139048e58212de79 62 PANTHER PTHR10916 1 61 3.0E-29 T 22-04-2016 LK04_RS00910 b2e9e06df915a792139048e58212de79 62 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.1E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00910 b2e9e06df915a792139048e58212de79 62 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00910 b2e9e06df915a792139048e58212de79 62 Gene3D G3DSA:1.10.287.310 1 60 1.1E-27 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS04785 69a1474eeaaec67df966aeaa27602dca 112 Pfam PF10697 Protein of unknown function (DUF2502) 26 101 4.0E-14 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 PANTHER PTHR30532:SF1 32 292 8.6E-63 T 22-04-2016 LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 PANTHER PTHR30532 32 292 8.6E-63 T 22-04-2016 LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 Pfam PF01497 Periplasmic binding protein 35 266 3.3E-29 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 Gene3D G3DSA:3.40.50.1980 124 290 4.7E-55 T 22-04-2016 LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 Gene3D G3DSA:3.40.50.1980 31 118 8.2E-31 T 22-04-2016 LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 SUPERFAMILY SSF53807 32 289 1.18E-54 T 22-04-2016 LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 181 196 1.6E-40 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 205 223 1.6E-40 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 51 69 1.6E-40 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 233 250 1.6E-40 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 82 97 1.6E-40 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein LK04_RS15065 a8f5e32c23640de5633ad42f29504c72 292 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 270 283 1.6E-40 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 Pfam PF00271 Helicase conserved C-terminal domain 231 339 2.0E-28 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 SMART SM00487 25 223 4.5E-64 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 Gene3D G3DSA:3.40.50.300 208 374 6.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 Pfam PF00270 DEAD/DEAH box helicase 31 195 1.8E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 558 46.9 T 22-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 PANTHER PTHR24031:SF261 6 460 2.3E-261 T 22-04-2016 LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 PANTHER PTHR24031:SF261 530 627 2.3E-261 T 22-04-2016 LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 Pfam PF03880 DbpA RNA binding domain 487 556 1.6E-20 T 22-04-2016 IPR005580 DbpA, RNA-binding domain LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 SMART SM00490 258 339 1.5E-31 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 Gene3D G3DSA:3.40.50.300 6 207 5.2E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 SUPERFAMILY SSF52540 147 353 4.26E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 SUPERFAMILY SSF52540 5 209 4.75E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 PANTHER PTHR24031 6 460 2.3E-261 T 22-04-2016 LK04_RS16370 e6abefcc1b01223bd6919439c948f400 628 PANTHER PTHR24031 530 627 2.3E-261 T 22-04-2016 LK04_RS06060 623a724b697dcf75e45109b902c57bc3 378 Gene3D G3DSA:3.10.560.10 244 342 3.3E-33 T 22-04-2016 LK04_RS06060 623a724b697dcf75e45109b902c57bc3 378 Gene3D G3DSA:3.30.1950.10 89 163 6.2E-34 T 22-04-2016 LK04_RS06060 623a724b697dcf75e45109b902c57bc3 378 PANTHER PTHR33619:SF3 1 365 6.3E-80 T 22-04-2016 LK04_RS06060 623a724b697dcf75e45109b902c57bc3 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 80 164 9.5E-28 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 LK04_RS06060 623a724b697dcf75e45109b902c57bc3 378 Gene3D G3DSA:3.10.560.10 164 243 4.6E-26 T 22-04-2016 LK04_RS06060 623a724b697dcf75e45109b902c57bc3 378 Pfam PF10531 SLBB domain 173 218 9.0E-5 T 22-04-2016 IPR019554 Soluble ligand binding domain LK04_RS06060 623a724b697dcf75e45109b902c57bc3 378 Pfam PF10531 SLBB domain 255 308 5.6E-4 T 22-04-2016 IPR019554 Soluble ligand binding domain LK04_RS06060 623a724b697dcf75e45109b902c57bc3 378 PANTHER PTHR33619 1 365 6.3E-80 T 22-04-2016 LK04_RS06060 623a724b697dcf75e45109b902c57bc3 378 Gene3D G3DSA:1.20.5.70 344 376 3.8E-14 T 22-04-2016 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 Pfam PF08245 Mur ligase middle domain 108 291 1.4E-17 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 SUPERFAMILY SSF51984 1 90 4.71E-24 T 22-04-2016 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 PANTHER PTHR23135 1 449 0.0 T 22-04-2016 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 8.5E-260 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 SUPERFAMILY SSF53244 312 449 1.83E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 PANTHER PTHR23135:SF17 1 449 0.0 T 22-04-2016 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 Gene3D G3DSA:3.40.50.720 1 90 8.0E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.222 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 Pfam PF01225 Mur ligase family, catalytic domain 2 101 8.9E-19 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 SUPERFAMILY SSF53623 95 308 4.06E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 Gene3D G3DSA:3.40.1190.10 92 312 5.1E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 Gene3D G3DSA:3.90.190.20 313 449 7.6E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS01515 0639efdf0bbcf18772b22e0a9a437edc 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 4.2E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS04260 f284827734393898882c99af65bc5e19 109 PANTHER PTHR40275 12 105 9.8E-19 T 22-04-2016 LK04_RS04260 f284827734393898882c99af65bc5e19 109 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 35 105 2.9E-15 T 22-04-2016 IPR014057 Addiction module antidote protein, HI1420 LK04_RS04260 f284827734393898882c99af65bc5e19 109 Gene3D G3DSA:1.10.260.40 66 105 4.8E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS04260 f284827734393898882c99af65bc5e19 109 PANTHER PTHR40275:SF1 12 105 9.8E-19 T 22-04-2016 LK04_RS04260 f284827734393898882c99af65bc5e19 109 SUPERFAMILY SSF47413 49 105 1.46E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 PANTHER PTHR32071 299 583 1.6E-109 T 22-04-2016 LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 SUPERFAMILY SSF46689 503 584 1.11E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 Pfam PF00158 Sigma-54 interaction domain 304 459 3.4E-59 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 PANTHER PTHR32071:SF5 299 583 1.6E-109 T 22-04-2016 LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 SUPERFAMILY SSF55781 45 188 5.89E-5 T 22-04-2016 IPR029016 GAF domain-like LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 SUPERFAMILY SSF52540 307 532 1.63E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 Gene3D G3DSA:3.40.50.300 305 465 4.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 Gene3D G3DSA:1.10.10.60 552 583 1.1E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 Pfam PF02954 Bacterial regulatory protein, Fis family 553 583 5.8E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 SMART SM00382 312 456 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS14045 cc4a392e501a8b877c1b4cd526f8cb55 590 Gene3D G3DSA:1.10.8.60 487 537 3.6E-10 T 22-04-2016 LK04_RS17205 1b480895db43379feb317b90701f512a 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 1.3E-212 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 LK04_RS17205 1b480895db43379feb317b90701f512a 549 PANTHER PTHR10110:SF120 1 548 1.5E-196 T 22-04-2016 LK04_RS17205 1b480895db43379feb317b90701f512a 549 Pfam PF00999 Sodium/hydrogen exchanger family 7 421 1.2E-78 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LK04_RS17205 1b480895db43379feb317b90701f512a 549 PANTHER PTHR10110 1 548 1.5E-196 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 SUPERFAMILY SSF52540 5 235 5.85E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 PANTHER PTHR24220:SF284 246 287 5.2E-114 T 22-04-2016 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 PANTHER PTHR24220:SF284 1 221 5.2E-114 T 22-04-2016 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 Pfam PF03459 TOBE domain 290 350 6.6E-15 T 22-04-2016 IPR005116 Transport-associated OB, type 1 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 Gene3D G3DSA:2.40.50.100 279 348 6.1E-19 T 22-04-2016 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 SUPERFAMILY SSF50331 235 350 1.38E-20 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 7.2E-147 T 22-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 289 351 3.0E-16 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 PANTHER PTHR24220 246 287 5.2E-114 T 22-04-2016 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 PANTHER PTHR24220 1 221 5.2E-114 T 22-04-2016 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 SMART SM00382 23 206 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 Pfam PF00005 ABC transporter 16 156 7.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12915 0943d3782a6d6b621e118596c0480e37 352 Gene3D G3DSA:3.40.50.300 14 219 2.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.5E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.5E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 2.2E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 SMART SM00895 96 220 3.4E-16 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 SMART SM00345 13 72 7.3E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 Pfam PF07729 FCD domain 96 219 3.0E-17 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 Gene3D G3DSA:1.20.120.530 95 229 7.3E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 SUPERFAMILY SSF46785 2 76 2.56E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 PANTHER PTHR11751 1 112 8.5E-53 T 22-04-2016 LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 SUPERFAMILY SSF48008 95 227 3.4E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 PANTHER PTHR11751:SF421 1 112 8.5E-53 T 22-04-2016 LK04_RS01670 6992d2f70b90a365d3524ef458961a17 257 Gene3D G3DSA:1.10.10.10 3 78 1.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05570 2cbc399edc80a31098a69276455d1155 398 Pfam PF00994 Probable molybdopterin binding domain 6 170 3.7E-30 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS05570 2cbc399edc80a31098a69276455d1155 398 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 398 109.333 T 22-04-2016 IPR008135 Competence-induced protein CinA LK04_RS05570 2cbc399edc80a31098a69276455d1155 398 Gene3D G3DSA:3.40.980.10 2 200 1.5E-27 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS05570 2cbc399edc80a31098a69276455d1155 398 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 3 396 3.9E-125 T 22-04-2016 IPR008135 Competence-induced protein CinA LK04_RS05570 2cbc399edc80a31098a69276455d1155 398 PIRSF PIRSF006728 1 384 1.3E-105 T 22-04-2016 IPR008135 Competence-induced protein CinA LK04_RS05570 2cbc399edc80a31098a69276455d1155 398 PANTHER PTHR13939 2 386 1.0E-198 T 22-04-2016 LK04_RS05570 2cbc399edc80a31098a69276455d1155 398 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 167 6.5E-33 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS05570 2cbc399edc80a31098a69276455d1155 398 SUPERFAMILY SSF53218 2 192 1.01E-34 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS05570 2cbc399edc80a31098a69276455d1155 398 SMART SM00852 5 172 1.9E-31 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS05570 2cbc399edc80a31098a69276455d1155 398 PANTHER PTHR13939:SF3 2 386 1.0E-198 T 22-04-2016 LK04_RS04190 a29c4c19f2b725cf0fd3db4c8a679e52 244 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 231 2.2E-54 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW LK04_RS04190 a29c4c19f2b725cf0fd3db4c8a679e52 244 SUPERFAMILY SSF48452 25 169 7.02E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS04190 a29c4c19f2b725cf0fd3db4c8a679e52 244 Gene3D G3DSA:1.25.40.10 23 181 6.5E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS10805 903af3025c0ceb890865761c5bf0d81e 122 SUPERFAMILY SSF54427 17 113 2.5E-12 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS10805 903af3025c0ceb890865761c5bf0d81e 122 Gene3D G3DSA:3.10.450.50 18 113 5.7E-7 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS10805 903af3025c0ceb890865761c5bf0d81e 122 Pfam PF14534 Domain of unknown function (DUF4440) 18 106 9.9E-7 T 22-04-2016 IPR027843 Domain of unknown function DUF4440 LK04_RS17925 66178d1f71ac173c1d2b05bf545eb573 260 Pfam PF01026 TatD related DNase 2 258 6.2E-68 T 22-04-2016 IPR001130 TatD family GO:0016788 LK04_RS17925 66178d1f71ac173c1d2b05bf545eb573 260 PANTHER PTHR10060 1 260 4.6E-139 T 22-04-2016 IPR001130 TatD family GO:0016788 LK04_RS17925 66178d1f71ac173c1d2b05bf545eb573 260 PIRSF PIRSF005902 1 260 2.5E-75 T 22-04-2016 IPR001130 TatD family GO:0016788 LK04_RS17925 66178d1f71ac173c1d2b05bf545eb573 260 Hamap MF_00901 Tat-linked quality control protein TatD [tatD]. 1 260 63.522 T 22-04-2016 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 LK04_RS17925 66178d1f71ac173c1d2b05bf545eb573 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LK04_RS17925 66178d1f71ac173c1d2b05bf545eb573 260 SUPERFAMILY SSF51556 1 259 1.38E-83 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS17925 66178d1f71ac173c1d2b05bf545eb573 260 Gene3D G3DSA:3.20.20.140 1 259 3.4E-86 T 22-04-2016 LK04_RS17925 66178d1f71ac173c1d2b05bf545eb573 260 PANTHER PTHR10060:SF13 1 260 4.6E-139 T 22-04-2016 LK04_RS17925 66178d1f71ac173c1d2b05bf545eb573 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LK04_RS07890 85a716d17c44586766a30f4ed95a24a6 236 PANTHER PTHR34108:SF1 3 235 3.9E-68 T 22-04-2016 LK04_RS07890 85a716d17c44586766a30f4ed95a24a6 236 SUPERFAMILY SSF63848 130 235 1.2E-29 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 LK04_RS07890 85a716d17c44586766a30f4ed95a24a6 236 PANTHER PTHR34108 3 235 3.9E-68 T 22-04-2016 LK04_RS07890 85a716d17c44586766a30f4ed95a24a6 236 Gene3D G3DSA:2.160.20.70 127 235 1.1E-36 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 LK04_RS07890 85a716d17c44586766a30f4ed95a24a6 236 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 132 232 1.3E-29 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 LK04_RS07890 85a716d17c44586766a30f4ed95a24a6 236 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 236 27.79 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 LK04_RS07890 85a716d17c44586766a30f4ed95a24a6 236 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 4.1E-37 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 LK04_RS07890 85a716d17c44586766a30f4ed95a24a6 236 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 235 3.9E-69 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 LK04_RS12670 a8630056c45e4d8a21299a2d4d4450ea 488 PANTHER PTHR24064:SF168 25 473 2.1E-45 T 22-04-2016 LK04_RS12670 a8630056c45e4d8a21299a2d4d4450ea 488 Gene3D G3DSA:1.20.1250.20 290 477 2.4E-11 T 22-04-2016 LK04_RS12670 a8630056c45e4d8a21299a2d4d4450ea 488 Gene3D G3DSA:1.20.1250.20 48 231 7.5E-22 T 22-04-2016 LK04_RS12670 a8630056c45e4d8a21299a2d4d4450ea 488 PANTHER PTHR24064 25 473 2.1E-45 T 22-04-2016 LK04_RS12670 a8630056c45e4d8a21299a2d4d4450ea 488 SUPERFAMILY SSF103473 37 483 3.4E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS12670 a8630056c45e4d8a21299a2d4d4450ea 488 Pfam PF00083 Sugar (and other) transporter 48 460 4.1E-34 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS05350 d8abd0d83694dfe7b408f8d5fcbf5b46 336 SUPERFAMILY SSF55347 132 318 7.24E-49 T 22-04-2016 LK04_RS05350 d8abd0d83694dfe7b408f8d5fcbf5b46 336 SMART SM00859 6 121 3.8E-30 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LK04_RS05350 d8abd0d83694dfe7b408f8d5fcbf5b46 336 Gene3D G3DSA:3.30.360.10 145 313 2.1E-48 T 22-04-2016 LK04_RS05350 d8abd0d83694dfe7b408f8d5fcbf5b46 336 SUPERFAMILY SSF51735 5 157 4.44E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05350 d8abd0d83694dfe7b408f8d5fcbf5b46 336 PANTHER PTHR10174:SF2 48 334 4.9E-52 T 22-04-2016 LK04_RS05350 d8abd0d83694dfe7b408f8d5fcbf5b46 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 1.5E-26 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LK04_RS05350 d8abd0d83694dfe7b408f8d5fcbf5b46 336 PIRSF PIRSF000148 4 336 5.5E-94 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS05350 d8abd0d83694dfe7b408f8d5fcbf5b46 336 Gene3D G3DSA:3.40.50.720 1 144 1.1E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05350 d8abd0d83694dfe7b408f8d5fcbf5b46 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 2.0E-31 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS05350 d8abd0d83694dfe7b408f8d5fcbf5b46 336 PANTHER PTHR10174 48 334 4.9E-52 T 22-04-2016 LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 Pfam PF03466 LysR substrate binding domain 92 294 1.5E-45 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 Gene3D G3DSA:1.10.10.10 3 82 6.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 Gene3D G3DSA:3.40.190.10 274 286 1.7E-19 T 22-04-2016 LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 Gene3D G3DSA:3.40.190.10 93 175 1.7E-19 T 22-04-2016 LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 SUPERFAMILY SSF46785 3 84 1.05E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 SUPERFAMILY SSF53850 93 297 9.0E-45 T 22-04-2016 LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 PANTHER PTHR30427 2 299 2.4E-144 T 22-04-2016 LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.1E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.1E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.1E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 PANTHER PTHR30427:SF1 2 299 2.4E-144 T 22-04-2016 LK04_RS03100 fdfc313aa8a6b3feff82349e13fe748e 306 Gene3D G3DSA:3.40.190.10 176 262 5.1E-23 T 22-04-2016 LK04_RS06265 719a7a028fd9dc80fd6305c15ffd1f02 185 Pfam PF01381 Helix-turn-helix 13 66 3.8E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS06265 719a7a028fd9dc80fd6305c15ffd1f02 185 SUPERFAMILY SSF51182 51 185 1.02E-32 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS06265 719a7a028fd9dc80fd6305c15ffd1f02 185 Gene3D G3DSA:1.10.260.40 7 73 5.1E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06265 719a7a028fd9dc80fd6305c15ffd1f02 185 PANTHER PTHR10245 9 185 1.1E-76 T 22-04-2016 LK04_RS06265 719a7a028fd9dc80fd6305c15ffd1f02 185 Pfam PF07883 Cupin domain 111 178 5.1E-19 T 22-04-2016 IPR013096 Cupin 2, conserved barrel LK04_RS06265 719a7a028fd9dc80fd6305c15ffd1f02 185 PANTHER PTHR10245:SF42 9 185 1.1E-76 T 22-04-2016 LK04_RS06265 719a7a028fd9dc80fd6305c15ffd1f02 185 SUPERFAMILY SSF47413 6 71 1.6E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06265 719a7a028fd9dc80fd6305c15ffd1f02 185 Gene3D G3DSA:2.60.120.10 79 183 4.5E-21 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS06265 719a7a028fd9dc80fd6305c15ffd1f02 185 SMART SM00530 11 66 3.3E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 Pfam PF00149 Calcineurin-like phosphoesterase 25 260 6.5E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 PANTHER PTHR11575:SF6 8 645 0.0 T 22-04-2016 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 SUPERFAMILY SSF55816 356 597 1.96E-39 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 ProSitePatterns PS00785 5'-nucleotidase signature 1. 25 37 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 Gene3D G3DSA:3.60.21.10 17 353 6.8E-95 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 Gene3D G3DSA:3.90.780.10 356 596 1.6E-45 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 PANTHER PTHR11575 8 645 0.0 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 23 647 0.0 T 22-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 SUPERFAMILY SSF56300 19 353 1.61E-84 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 ProSitePatterns PS00786 5'-nucleotidase signature 2. 110 121 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 Pfam PF02872 5'-nucleotidase, C-terminal domain 356 550 3.9E-24 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 PRINTS PR01607 Apyrase family signature 23 41 8.4E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 PRINTS PR01607 Apyrase family signature 284 304 8.4E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 PRINTS PR01607 Apyrase family signature 216 233 8.4E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 PRINTS PR01607 Apyrase family signature 530 549 8.4E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 PRINTS PR01607 Apyrase family signature 429 452 8.4E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS01440 06e766e6cea06c3ed9c0f1361555b403 649 PRINTS PR01607 Apyrase family signature 244 267 8.4E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LK04_RS06665 ee78f8d8550f3286f769c1752c3a1ff4 234 SUPERFAMILY SSF52540 3 226 3.68E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06665 ee78f8d8550f3286f769c1752c3a1ff4 234 PANTHER PTHR24220 6 225 2.3E-124 T 22-04-2016 LK04_RS06665 ee78f8d8550f3286f769c1752c3a1ff4 234 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06665 ee78f8d8550f3286f769c1752c3a1ff4 234 PANTHER PTHR24220:SF380 6 225 2.3E-124 T 22-04-2016 LK04_RS06665 ee78f8d8550f3286f769c1752c3a1ff4 234 Pfam PF00005 ABC transporter 27 181 4.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06665 ee78f8d8550f3286f769c1752c3a1ff4 234 Gene3D G3DSA:3.40.50.300 3 226 8.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06665 ee78f8d8550f3286f769c1752c3a1ff4 234 SMART SM00382 36 229 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06665 ee78f8d8550f3286f769c1752c3a1ff4 234 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 5 222 9.0E-106 T 22-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 LK04_RS18165 ea6b51cd18843afc3c008b4b5fa614c9 358 Gene3D G3DSA:3.90.25.10 193 341 5.2E-56 T 22-04-2016 LK04_RS18165 ea6b51cd18843afc3c008b4b5fa614c9 358 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 342 1.1E-155 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LK04_RS18165 ea6b51cd18843afc3c008b4b5fa614c9 358 PANTHER PTHR10366:SF41 3 355 3.7E-178 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LK04_RS18165 ea6b51cd18843afc3c008b4b5fa614c9 358 PANTHER PTHR10366 3 355 3.7E-178 T 22-04-2016 LK04_RS18165 ea6b51cd18843afc3c008b4b5fa614c9 358 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 328 4.0E-99 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18165 ea6b51cd18843afc3c008b4b5fa614c9 358 Gene3D G3DSA:3.40.50.720 1 192 3.8E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18165 ea6b51cd18843afc3c008b4b5fa614c9 358 SUPERFAMILY SSF51735 1 340 3.94E-96 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 SMART SM00344 4 113 2.3E-25 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 Gene3D G3DSA:1.10.10.10 5 56 6.3E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 Gene3D G3DSA:3.30.70.920 57 141 1.8E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 PANTHER PTHR30154 1 155 1.4E-45 T 22-04-2016 LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 1.5E-17 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 PANTHER PTHR30154:SF0 1 155 1.4E-45 T 22-04-2016 LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.1E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.1E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.1E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 SUPERFAMILY SSF54909 64 150 5.9E-14 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 Pfam PF13404 AsnC-type helix-turn-helix domain 5 42 2.5E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS17295 d00fe99d5f1af013426ac0a7da1a16a5 163 SUPERFAMILY SSF46785 3 63 1.22E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Gene3D G3DSA:3.40.50.2300 520 644 3.2E-31 T 22-04-2016 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 5.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 3.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Gene3D G3DSA:1.10.287.970 1 89 2.9E-40 T 22-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 SMART SM00388 282 347 3.6E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Gene3D G3DSA:1.10.287.130 274 341 5.8E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Gene3D G3DSA:3.30.565.10 348 507 1.7E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 PIRSF PIRSF003182 1 778 0.0 T 22-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Gene3D G3DSA:1.20.120.160 676 775 9.8E-35 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Gene3D G3DSA:3.30.450.20 142 267 9.0E-23 T 22-04-2016 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 SMART SM00448 526 639 2.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 PANTHER PTHR24423:SF476 4 95 0.0 T 22-04-2016 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 PANTHER PTHR24423:SF476 153 677 0.0 T 22-04-2016 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Pfam PF01627 Hpt domain 686 762 1.2E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 PANTHER PTHR24423 4 95 0.0 T 22-04-2016 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 PANTHER PTHR24423 153 677 0.0 T 22-04-2016 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 6.8E-17 T 22-04-2016 IPR000014 PAS domain LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 SMART SM00387 394 507 2.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Pfam PF00989 PAS fold 156 266 1.2E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 SUPERFAMILY SSF55874 336 504 4.58E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 SUPERFAMILY SSF47226 662 774 1.02E-28 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 SUPERFAMILY SSF52172 526 651 8.4E-29 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 SUPERFAMILY SSF47384 269 347 1.41E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 SUPERFAMILY SSF55785 142 267 4.54E-22 T 22-04-2016 IPR000014 PAS domain LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 SMART SM00091 155 221 1.2E-7 T 22-04-2016 IPR000014 PAS domain LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 SMART SM00073 675 772 1.1E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS16660 bb8986615d970fc9bc8079d4c2e0d3aa 778 Pfam PF00072 Response regulator receiver domain 528 639 3.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS15565 acf2716507f8c2e6938829c0fabf2bc3 289 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 278 3.9E-146 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 LK04_RS15565 acf2716507f8c2e6938829c0fabf2bc3 289 Gene3D G3DSA:3.60.21.10 169 277 2.6E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS15565 acf2716507f8c2e6938829c0fabf2bc3 289 Gene3D G3DSA:3.60.21.10 1 132 2.6E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS15565 acf2716507f8c2e6938829c0fabf2bc3 289 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 50.476 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 LK04_RS15565 acf2716507f8c2e6938829c0fabf2bc3 289 PANTHER PTHR24032:SF27 1 276 9.5E-168 T 22-04-2016 LK04_RS15565 acf2716507f8c2e6938829c0fabf2bc3 289 SUPERFAMILY SSF56300 1 259 6.16E-60 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS15565 acf2716507f8c2e6938829c0fabf2bc3 289 Pfam PF00149 Calcineurin-like phosphoesterase 2 127 3.4E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LK04_RS15565 acf2716507f8c2e6938829c0fabf2bc3 289 PANTHER PTHR24032 1 276 9.5E-168 T 22-04-2016 LK04_RS15565 acf2716507f8c2e6938829c0fabf2bc3 289 PIRSF PIRSF000903 1 275 4.1E-121 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 Pfam PF00005 ABC transporter 29 178 1.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 Pfam PF00005 ABC transporter 280 434 5.1E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 SUPERFAMILY SSF52540 254 486 9.69E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 SMART SM00382 288 483 0.81 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 SMART SM00382 38 233 2.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 Gene3D G3DSA:3.40.50.300 10 240 1.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 Gene3D G3DSA:3.40.50.300 263 496 1.1E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 PANTHER PTHR24220:SF303 15 388 7.8E-289 T 22-04-2016 LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 SUPERFAMILY SSF52540 12 236 3.83E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05850 a473e2ab2d3383980958da2fa5a9ba08 506 PANTHER PTHR24220 15 388 7.8E-289 T 22-04-2016 LK04_RS16145 437e4b658be114a004792992abe21ad2 190 PIRSF PIRSF003159 1 181 9.6E-76 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LK04_RS16145 437e4b658be114a004792992abe21ad2 190 SUPERFAMILY SSF160930 6 161 1.12E-58 T 22-04-2016 LK04_RS16145 437e4b658be114a004792992abe21ad2 190 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 184 41.801 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LK04_RS16145 437e4b658be114a004792992abe21ad2 190 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 171 6.7E-77 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LK04_RS16145 437e4b658be114a004792992abe21ad2 190 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 174 1.0E-49 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LK04_RS05970 b8244783f88063e945a3e9ec18be82b7 299 PANTHER PTHR12358 8 299 2.6E-66 T 22-04-2016 LK04_RS05970 b8244783f88063e945a3e9ec18be82b7 299 SMART SM00046 6 129 1.1E-14 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LK04_RS05970 b8244783f88063e945a3e9ec18be82b7 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 298 6.3E-133 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 LK04_RS05970 b8244783f88063e945a3e9ec18be82b7 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 129 8.5E-28 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LK04_RS05970 b8244783f88063e945a3e9ec18be82b7 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 3.8E-92 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase LK04_RS05970 b8244783f88063e945a3e9ec18be82b7 299 SUPERFAMILY SSF111331 8 296 4.8E-71 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain LK04_RS05970 b8244783f88063e945a3e9ec18be82b7 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 4 299 46.762 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 LK04_RS10755 3a09eead2f6c6bf5534f0199343196b1 292 SUPERFAMILY SSF46785 1 81 2.18E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10755 3a09eead2f6c6bf5534f0199343196b1 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 2.5E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS10755 3a09eead2f6c6bf5534f0199343196b1 292 Gene3D G3DSA:3.40.190.10 86 170 1.1E-22 T 22-04-2016 LK04_RS10755 3a09eead2f6c6bf5534f0199343196b1 292 Pfam PF03466 LysR substrate binding domain 83 287 1.4E-42 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS10755 3a09eead2f6c6bf5534f0199343196b1 292 SUPERFAMILY SSF53850 84 290 1.09E-46 T 22-04-2016 LK04_RS10755 3a09eead2f6c6bf5534f0199343196b1 292 PANTHER PTHR30537:SF5 1 291 8.6E-105 T 22-04-2016 LK04_RS10755 3a09eead2f6c6bf5534f0199343196b1 292 PANTHER PTHR30537 1 291 8.6E-105 T 22-04-2016 LK04_RS10755 3a09eead2f6c6bf5534f0199343196b1 292 Gene3D G3DSA:3.40.190.10 171 254 2.2E-11 T 22-04-2016 LK04_RS10755 3a09eead2f6c6bf5534f0199343196b1 292 Gene3D G3DSA:1.10.10.10 1 81 2.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 Pfam PF00271 Helicase conserved C-terminal domain 235 339 1.0E-24 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 Gene3D G3DSA:3.40.50.300 1 212 2.8E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 456 51.256 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 SUPERFAMILY SSF52540 1 209 2.47E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 SUPERFAMILY SSF52540 147 355 1.86E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 Pfam PF00270 DEAD/DEAH box helicase 25 197 5.5E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 PANTHER PTHR24031:SF0 1 457 8.9E-193 T 22-04-2016 LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 PANTHER PTHR24031 1 457 8.9E-193 T 22-04-2016 LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 Gene3D G3DSA:3.40.50.300 213 373 2.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 SMART SM00490 259 340 1.5E-30 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LK04_RS12795 b1e8cdecca66cff4c6f6c4bb839fac7b 459 SMART SM00487 20 223 1.1E-61 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 PANTHER PTHR30591 1 1126 0.0 T 22-04-2016 LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 SUPERFAMILY SSF52540 1 347 3.98E-123 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 Gene3D G3DSA:1.10.10.160 86 182 4.4E-33 T 22-04-2016 IPR013986 DExx box DNA helicase domain LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 PIRSF PIRSF000980 1 1126 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 Gene3D G3DSA:3.40.50.300 369 456 9.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 Gene3D G3DSA:3.40.50.300 658 754 9.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 PANTHER PTHR30591:SF1 1 1126 0.0 T 22-04-2016 LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 SUPERFAMILY SSF52540 364 813 9.45E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 SUPERFAMILY SSF52980 820 1118 2.47E-93 T 22-04-2016 IPR011335 Restriction endonuclease type II-like LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1124 13.574 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1088 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 LK04_RS03240 e397e66fe280d22c41b6e90f7477103b 1126 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 808 1.7E-297 T 22-04-2016 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 SUPERFAMILY SSF55447 364 472 5.76E-34 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LK04_RS08785 c4df8a570de604e180f865b732b33136 480 SMART SM01092 365 466 6.4E-34 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LK04_RS08785 c4df8a570de604e180f865b732b33136 480 SUPERFAMILY SSF54292 2 85 7.81E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 PANTHER PTHR11908 2 470 2.3E-135 T 22-04-2016 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 366 465 2.4E-30 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LK04_RS08785 c4df8a570de604e180f865b732b33136 480 Pfam PF01799 [2Fe-2S] binding domain 81 153 7.7E-29 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 Gene3D G3DSA:1.10.150.120 82 179 8.3E-35 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 71 2.6E-4 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 SUPERFAMILY SSF56176 180 356 9.81E-51 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 Gene3D G3DSA:3.30.465.10 244 357 2.4E-34 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 465 1.8E-189 T 22-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 PIRSF PIRSF036557 1 479 2.9E-185 T 22-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria LK04_RS08785 c4df8a570de604e180f865b732b33136 480 Gene3D G3DSA:3.30.43.10 195 243 5.3E-21 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 SUPERFAMILY SSF47741 92 195 6.8E-32 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 194 357 9.7E-49 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 LK04_RS08785 c4df8a570de604e180f865b732b33136 480 Gene3D G3DSA:3.10.20.30 2 81 2.5E-24 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS08785 c4df8a570de604e180f865b732b33136 480 Gene3D G3DSA:3.30.390.50 367 466 1.1E-36 T 22-04-2016 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 Gene3D G3DSA:3.40.50.720 303 492 1.7E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05260 352483db952d0227abec001bb33dec6b 709 PANTHER PTHR23309 6 705 0.0 T 22-04-2016 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 203 6.3E-39 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 PANTHER PTHR23309:SF6 6 705 0.0 T 22-04-2016 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 SUPERFAMILY SSF48179 612 704 3.49E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 SUPERFAMILY SSF51735 307 490 7.77E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05260 352483db952d0227abec001bb33dec6b 709 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 309 488 4.8E-58 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 SUPERFAMILY SSF52096 5 297 1.46E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS05260 352483db952d0227abec001bb33dec6b 709 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 5 704 0.0 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 Gene3D G3DSA:1.10.1040.10 493 584 4.3E-28 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 491 584 4.1E-25 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 Gene3D G3DSA:1.10.1040.10 621 704 1.9E-18 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 Gene3D G3DSA:3.90.226.10 3 202 7.2E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS05260 352483db952d0227abec001bb33dec6b 709 SUPERFAMILY SSF48179 490 590 8.16E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS05260 352483db952d0227abec001bb33dec6b 709 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 488 513 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 Gene3D G3DSA:3.30.930.10 415 583 1.7E-111 T 22-04-2016 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 Gene3D G3DSA:3.30.930.10 131 275 1.7E-111 T 22-04-2016 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 2.2E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 Pfam PF02938 GAD domain 307 406 1.7E-29 T 22-04-2016 IPR029351 GAD domain LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 Gene3D G3DSA:3.30.1360.30 276 414 1.5E-48 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 SUPERFAMILY SSF55261 288 419 1.0E-45 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 PANTHER PTHR22594 370 571 6.8E-254 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 PANTHER PTHR22594 1 296 6.8E-254 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 SUPERFAMILY SSF50249 1 105 6.29E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 SUPERFAMILY SSF55681 420 580 4.58E-104 T 22-04-2016 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 SUPERFAMILY SSF55681 108 287 4.58E-104 T 22-04-2016 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 582 8.9E-270 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.3E-107 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 Gene3D G3DSA:2.40.50.140 1 107 2.7E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.717 T 22-04-2016 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 PANTHER PTHR22594:SF5 370 571 6.8E-254 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 LK04_RS07395 92b5534819230d1783d369f1cdfbb11c 593 PANTHER PTHR22594:SF5 1 296 6.8E-254 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 LK04_RS18340 3d91ff1f001c860ca13dffec40cfb8b1 300 PANTHER PTHR30465:SF10 10 300 1.6E-140 T 22-04-2016 LK04_RS18340 3d91ff1f001c860ca13dffec40cfb8b1 300 Gene3D G3DSA:1.10.3720.10 89 296 5.9E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18340 3d91ff1f001c860ca13dffec40cfb8b1 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 3.9E-15 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS18340 3d91ff1f001c860ca13dffec40cfb8b1 300 PANTHER PTHR30465 10 300 1.6E-140 T 22-04-2016 LK04_RS18340 3d91ff1f001c860ca13dffec40cfb8b1 300 SUPERFAMILY SSF161098 93 280 1.57E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18340 3d91ff1f001c860ca13dffec40cfb8b1 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 1.9E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17390 e09889a63d52097616550ac76c3dec62 261 PANTHER PTHR30193 1 260 3.0E-57 T 22-04-2016 LK04_RS17390 e09889a63d52097616550ac76c3dec62 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 258 2.6E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17390 e09889a63d52097616550ac76c3dec62 261 Gene3D G3DSA:1.10.3720.10 9 256 2.3E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17390 e09889a63d52097616550ac76c3dec62 261 SUPERFAMILY SSF161098 13 250 2.9E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17390 e09889a63d52097616550ac76c3dec62 261 PANTHER PTHR30193:SF20 1 260 3.0E-57 T 22-04-2016 LK04_RS16970 2cd9aab15363003c2e69879505c94a6c 290 Gene3D G3DSA:1.10.3720.10 56 288 6.9E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16970 2cd9aab15363003c2e69879505c94a6c 290 PANTHER PTHR30193:SF6 4 290 2.7E-82 T 22-04-2016 LK04_RS16970 2cd9aab15363003c2e69879505c94a6c 290 PANTHER PTHR30193 4 290 2.7E-82 T 22-04-2016 LK04_RS16970 2cd9aab15363003c2e69879505c94a6c 290 Gene3D G3DSA:1.20.58.370 10 39 6.1E-4 T 22-04-2016 LK04_RS16970 2cd9aab15363003c2e69879505c94a6c 290 SUPERFAMILY SSF160964 10 44 3.92E-5 T 22-04-2016 LK04_RS16970 2cd9aab15363003c2e69879505c94a6c 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 281 1.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16970 2cd9aab15363003c2e69879505c94a6c 290 SUPERFAMILY SSF161098 51 278 6.8E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06660 794d0755e4cc3dda28a5108d0ddac093 253 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06660 794d0755e4cc3dda28a5108d0ddac093 253 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 5 252 2.2E-119 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK LK04_RS06660 794d0755e4cc3dda28a5108d0ddac093 253 Gene3D G3DSA:3.40.50.300 6 249 1.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06660 794d0755e4cc3dda28a5108d0ddac093 253 PIRSF PIRSF037116 1 253 4.9E-139 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK LK04_RS06660 794d0755e4cc3dda28a5108d0ddac093 253 Pfam PF00005 ABC transporter 24 175 9.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06660 794d0755e4cc3dda28a5108d0ddac093 253 SUPERFAMILY SSF52540 4 250 7.74E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06660 794d0755e4cc3dda28a5108d0ddac093 253 PANTHER PTHR24220:SF554 9 252 4.9E-141 T 22-04-2016 LK04_RS06660 794d0755e4cc3dda28a5108d0ddac093 253 SMART SM00382 32 225 1.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06660 794d0755e4cc3dda28a5108d0ddac093 253 PANTHER PTHR24220 9 252 4.9E-141 T 22-04-2016 LK04_RS14960 bf52adf3df53ae1799d6277b239de561 250 Gene3D G3DSA:3.40.1180.10 16 244 2.1E-94 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LK04_RS14960 bf52adf3df53ae1799d6277b239de561 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 17 243 2.9E-99 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LK04_RS14960 bf52adf3df53ae1799d6277b239de561 250 SUPERFAMILY SSF64005 16 239 1.02E-85 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LK04_RS14960 bf52adf3df53ae1799d6277b239de561 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 1.6E-77 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LK04_RS14960 bf52adf3df53ae1799d6277b239de561 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 LK04_RS14960 bf52adf3df53ae1799d6277b239de561 250 PANTHER PTHR10291 17 246 4.0E-116 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LK04_RS14960 bf52adf3df53ae1799d6277b239de561 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 39.734 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LK04_RS11300 764262b47a453dac1c0cca88507d3f41 78 SUPERFAMILY SSF47336 1 77 1.23E-24 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS11300 764262b47a453dac1c0cca88507d3f41 78 PANTHER PTHR20863 3 76 3.7E-32 T 22-04-2016 LK04_RS11300 764262b47a453dac1c0cca88507d3f41 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 4.3E-37 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LK04_RS11300 764262b47a453dac1c0cca88507d3f41 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 8.0E-4 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LK04_RS11300 764262b47a453dac1c0cca88507d3f41 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.0E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS11300 764262b47a453dac1c0cca88507d3f41 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site LK04_RS11300 764262b47a453dac1c0cca88507d3f41 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.308 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LK04_RS11300 764262b47a453dac1c0cca88507d3f41 78 Gene3D G3DSA:1.10.1200.10 3 77 4.5E-36 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.6E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 Gene3D G3DSA:3.40.190.10 187 268 3.3E-13 T 22-04-2016 LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 SUPERFAMILY SSF46785 5 114 2.76E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 Gene3D G3DSA:3.40.190.10 93 186 5.3E-21 T 22-04-2016 LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 Gene3D G3DSA:1.10.10.10 5 88 2.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 PANTHER PTHR30126 5 300 9.7E-102 T 22-04-2016 LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 SUPERFAMILY SSF53850 94 299 7.0E-39 T 22-04-2016 LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 Pfam PF03466 LysR substrate binding domain 93 297 2.6E-38 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS17060 522d6b79a8f5694c2ee334e564c1e8b5 300 PANTHER PTHR30126:SF3 5 300 9.7E-102 T 22-04-2016 LK04_RS03055 5d7e1de51e17087f7db1c0026b0cf384 283 SUPERFAMILY SSF46689 8 82 6.81E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS03055 5d7e1de51e17087f7db1c0026b0cf384 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 71 7.1E-12 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LK04_RS03055 5d7e1de51e17087f7db1c0026b0cf384 283 PANTHER PTHR30514:SF4 8 245 1.1E-26 T 22-04-2016 LK04_RS03055 5d7e1de51e17087f7db1c0026b0cf384 283 Gene3D G3DSA:1.10.10.10 7 77 1.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03055 5d7e1de51e17087f7db1c0026b0cf384 283 Gene3D G3DSA:3.40.50.10490 104 269 3.3E-16 T 22-04-2016 LK04_RS03055 5d7e1de51e17087f7db1c0026b0cf384 283 SUPERFAMILY SSF53697 99 268 2.89E-18 T 22-04-2016 LK04_RS03055 5d7e1de51e17087f7db1c0026b0cf384 283 PANTHER PTHR30514 8 245 1.1E-26 T 22-04-2016 LK04_RS03055 5d7e1de51e17087f7db1c0026b0cf384 283 Pfam PF01380 SIS domain 130 244 1.2E-8 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 Gene3D G3DSA:3.40.30.10 1 94 4.8E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PIRSF PIRSF000238 1 521 5.2E-257 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PANTHER PTHR22912:SF107 199 514 2.7E-205 T 22-04-2016 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 Gene3D G3DSA:3.50.50.60 324 510 4.9E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 2.6E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 2.9E-37 T 22-04-2016 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 2.9E-37 T 22-04-2016 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 2.9E-37 T 22-04-2016 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 2.9E-37 T 22-04-2016 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 2.9E-37 T 22-04-2016 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 Pfam PF13192 Thioredoxin domain 126 191 6.9E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 Gene3D G3DSA:3.50.50.60 211 323 1.7E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PANTHER PTHR22912 199 514 2.7E-205 T 22-04-2016 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 SUPERFAMILY SSF52833 105 196 1.71E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 Gene3D G3DSA:3.40.30.10 104 196 7.5E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 SUPERFAMILY SSF51905 206 514 2.22E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 SUPERFAMILY SSF52833 1 101 5.81E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 3.7E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.7E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 3.7E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 3.7E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 3.7E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 3.7E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.7E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.7E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 3.7E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS05910 fcb90bc2da8e053f8ce18e5084865afa 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 3.6E-236 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 LK04_RS11615 9abd7623148c6995068313c6d25f3ba1 266 PANTHER PTHR10434:SF11 17 216 3.4E-16 T 22-04-2016 LK04_RS11615 9abd7623148c6995068313c6d25f3ba1 266 SUPERFAMILY SSF69593 60 258 1.06E-26 T 22-04-2016 LK04_RS11615 9abd7623148c6995068313c6d25f3ba1 266 Gene3D G3DSA:3.40.1130.10 154 248 4.4E-6 T 22-04-2016 LK04_RS11615 9abd7623148c6995068313c6d25f3ba1 266 PANTHER PTHR10434 17 216 3.4E-16 T 22-04-2016 LK04_RS11615 9abd7623148c6995068313c6d25f3ba1 266 SMART SM00563 96 206 1.5E-15 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS11615 9abd7623148c6995068313c6d25f3ba1 266 Pfam PF01553 Acyltransferase 84 193 8.9E-14 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS10280 64e3fe95f31168462bdbbd525e3c628c 262 Gene3D G3DSA:3.90.1720.10 125 257 1.0E-43 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS10280 64e3fe95f31168462bdbbd525e3c628c 262 Pfam PF00877 NlpC/P60 family 144 254 3.1E-30 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS10280 64e3fe95f31168462bdbbd525e3c628c 262 SUPERFAMILY SSF54001 128 256 2.06E-37 T 22-04-2016 LK04_RS10280 64e3fe95f31168462bdbbd525e3c628c 262 PANTHER PTHR21666 135 256 2.1E-36 T 22-04-2016 LK04_RS17995 8611d3ef0fe1808c3ec486b839b8a338 286 Pfam PF00892 EamA-like transporter family 1 128 3.1E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS17995 8611d3ef0fe1808c3ec486b839b8a338 286 Pfam PF00892 EamA-like transporter family 139 274 2.6E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS17995 8611d3ef0fe1808c3ec486b839b8a338 286 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 1.8E-84 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 LK04_RS17995 8611d3ef0fe1808c3ec486b839b8a338 286 PANTHER PTHR22911 1 275 5.3E-84 T 22-04-2016 LK04_RS17995 8611d3ef0fe1808c3ec486b839b8a338 286 PANTHER PTHR22911:SF27 1 275 5.3E-84 T 22-04-2016 LK04_RS17995 8611d3ef0fe1808c3ec486b839b8a338 286 SUPERFAMILY SSF103481 35 131 1.05E-7 T 22-04-2016 LK04_RS17995 8611d3ef0fe1808c3ec486b839b8a338 286 SUPERFAMILY SSF103481 198 277 4.84E-10 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 Gene3D G3DSA:1.20.120.160 772 906 1.5E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 Gene3D G3DSA:3.30.565.10 358 521 3.7E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SUPERFAMILY SSF158472 200 249 8.5E-5 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PANTHER PTHR24423:SF540 194 232 3.8E-184 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PANTHER PTHR24423:SF540 592 811 3.8E-184 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PANTHER PTHR24423:SF540 6 20 3.8E-184 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PANTHER PTHR24423:SF540 271 523 3.8E-184 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SMART SM00073 808 903 1.7E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SMART SM00388 292 357 2.6E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SUPERFAMILY SSF55874 346 517 6.42E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SMART SM00387 404 520 2.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS03400 e7495676511a370cb8196cb48070c403 909 Pfam PF00072 Response regulator receiver domain 667 778 6.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 4.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 4.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 4.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 4.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SUPERFAMILY SSF47384 277 358 5.49E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 177 1.1E-50 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PANTHER PTHR24423 194 232 3.8E-184 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PANTHER PTHR24423 592 811 3.8E-184 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PANTHER PTHR24423 6 20 3.8E-184 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 PANTHER PTHR24423 271 523 3.8E-184 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 519 1.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SUPERFAMILY SSF52172 663 790 2.28E-33 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SUPERFAMILY SSF52172 529 651 3.22E-5 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS03400 e7495676511a370cb8196cb48070c403 909 Gene3D G3DSA:1.10.287.130 284 353 3.1E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 Gene3D G3DSA:3.40.50.2300 658 771 8.0E-34 T 22-04-2016 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 Pfam PF00672 HAMP domain 182 248 4.3E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SMART SM00304 200 252 9.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 1.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SUPERFAMILY SSF47226 761 898 8.11E-24 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 Pfam PF01627 Hpt domain 818 899 4.1E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS03400 e7495676511a370cb8196cb48070c403 909 SMART SM00448 665 778 4.8E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS05795 0a30c537d7251ff0112007c978deae02 488 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LK04_RS05795 0a30c537d7251ff0112007c978deae02 488 PANTHER PTHR11785 5 485 9.2E-223 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS05795 0a30c537d7251ff0112007c978deae02 488 Pfam PF00324 Amino acid permease 21 474 4.5E-142 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LK04_RS05795 0a30c537d7251ff0112007c978deae02 488 PANTHER PTHR11785:SF204 5 485 9.2E-223 T 22-04-2016 LK04_RS05795 0a30c537d7251ff0112007c978deae02 488 PIRSF PIRSF006060 1 487 1.1E-78 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS01845 bb7d58b5577ee64be771113ed111603b 395 Pfam PF14088 Domain of unknown function (DUF4268) 234 369 2.5E-39 T 22-04-2016 IPR025364 Domain of unknown function DUF4268 LK04_RS12685 27ca46e972128115616f6864273a718d 354 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 158 233 5.2E-5 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS12685 27ca46e972128115616f6864273a718d 354 Gene3D G3DSA:3.30.360.10 148 348 4.9E-47 T 22-04-2016 LK04_RS12685 27ca46e972128115616f6864273a718d 354 SUPERFAMILY SSF55347 155 326 4.74E-24 T 22-04-2016 LK04_RS12685 27ca46e972128115616f6864273a718d 354 PANTHER PTHR22604 47 282 1.0E-31 T 22-04-2016 LK04_RS12685 27ca46e972128115616f6864273a718d 354 Gene3D G3DSA:3.40.50.720 26 147 7.0E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS12685 27ca46e972128115616f6864273a718d 354 SUPERFAMILY SSF51735 26 168 1.05E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS12685 27ca46e972128115616f6864273a718d 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 48 143 7.4E-8 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS19560 6ac8904376e60fe453938497a758bde1 196 Pfam PF07305 Protein of unknown function (DUF1454) 8 194 2.1E-85 T 22-04-2016 IPR009918 Protein of unknown function DUF1454 LK04_RS06400 9b784b36ded30de91c4f7df0a9ac45a4 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 454 2.5E-78 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS06400 9b784b36ded30de91c4f7df0a9ac45a4 537 SUPERFAMILY SSF53850 27 524 1.77E-114 T 22-04-2016 LK04_RS06400 9b784b36ded30de91c4f7df0a9ac45a4 537 Gene3D G3DSA:3.10.105.10 296 503 4.3E-46 T 22-04-2016 LK04_RS06400 9b784b36ded30de91c4f7df0a9ac45a4 537 PIRSF PIRSF002741 4 535 1.1E-78 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS06400 9b784b36ded30de91c4f7df0a9ac45a4 537 PANTHER PTHR30290 15 534 1.3E-104 T 22-04-2016 LK04_RS06400 9b784b36ded30de91c4f7df0a9ac45a4 537 Gene3D G3DSA:3.90.76.10 40 190 7.7E-33 T 22-04-2016 LK04_RS06400 9b784b36ded30de91c4f7df0a9ac45a4 537 Gene3D G3DSA:3.40.190.10 191 295 5.5E-30 T 22-04-2016 LK04_RS10465 a8d785e3d8484e45a3fff47a62da1816 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.1E-23 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LK04_RS10465 a8d785e3d8484e45a3fff47a62da1816 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.1E-23 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LK04_RS10465 a8d785e3d8484e45a3fff47a62da1816 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.1E-23 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LK04_RS10465 a8d785e3d8484e45a3fff47a62da1816 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.6E-27 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LK04_RS10465 a8d785e3d8484e45a3fff47a62da1816 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS10465 a8d785e3d8484e45a3fff47a62da1816 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.368 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LK04_RS10465 a8d785e3d8484e45a3fff47a62da1816 65 SUPERFAMILY SSF143034 2 64 1.57E-23 T 22-04-2016 LK04_RS10465 a8d785e3d8484e45a3fff47a62da1816 65 Pfam PF01632 Ribosomal protein L35 2 60 3.1E-24 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS10465 a8d785e3d8484e45a3fff47a62da1816 65 PANTHER PTHR33343 1 65 6.3E-30 T 22-04-2016 LK04_RS08340 20d16939f029efe434a8c306f165ffb4 529 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 465 482 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS08340 20d16939f029efe434a8c306f165ffb4 529 Pfam PF00367 phosphotransferase system, EIIB 456 484 9.9E-10 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS08340 20d16939f029efe434a8c306f165ffb4 529 PANTHER PTHR30009:SF11 5 527 8.6E-150 T 22-04-2016 LK04_RS08340 20d16939f029efe434a8c306f165ffb4 529 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 427 512 1.7E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS08340 20d16939f029efe434a8c306f165ffb4 529 SUPERFAMILY SSF55604 453 526 3.66E-16 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS08340 20d16939f029efe434a8c306f165ffb4 529 PANTHER PTHR30009 5 527 8.6E-150 T 22-04-2016 LK04_RS08340 20d16939f029efe434a8c306f165ffb4 529 Pfam PF02378 Phosphotransferase system, EIIC 12 368 2.3E-73 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS08340 20d16939f029efe434a8c306f165ffb4 529 Gene3D G3DSA:3.30.1360.60 450 527 8.2E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 6.3E-29 T 22-04-2016 IPR032305 GTP-binding protein, middle domain LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 3.2E-153 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 SUPERFAMILY SSF52540 197 374 2.14E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.5E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.5E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.5E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 PIRSF PIRSF006809 3 420 1.2E-147 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 PANTHER PTHR10229 1 426 5.3E-179 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.239 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.3E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 PANTHER PTHR10229:SF0 1 426 5.3E-179 T 22-04-2016 LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 SUPERFAMILY SSF54980 365 421 1.15E-12 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 Gene3D G3DSA:3.40.50.300 198 361 6.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01345 a57993ebbe587e863b223e5dbf74ad47 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 7.5E-30 T 22-04-2016 IPR025121 GTPase HflX, N-terminal LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 SUPERFAMILY SSF142984 250 332 8.37E-20 T 22-04-2016 LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 SUPERFAMILY SSF140490 335 427 1.7E-30 T 22-04-2016 LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 56 228 1.6E-50 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 Pfam PF10531 SLBB domain 255 297 5.7E-7 T 22-04-2016 IPR019554 Soluble ligand binding domain LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 341 423 2.0E-26 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 SMART SM00928 338 383 5.3E-20 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 PANTHER PTHR11780 7 426 3.9E-216 T 22-04-2016 LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 SUPERFAMILY SSF142019 15 249 2.09E-85 T 22-04-2016 LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 15 425 8.2E-203 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 176 191 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 LK04_RS05510 2c478f9e5033c3f66733a6dab3d13970 448 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 351 362 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 LK04_RS03285 2db4691a4581ac6135fc33363b0fd8b2 382 SMART SM00925 125 259 2.2E-68 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 LK04_RS03285 2db4691a4581ac6135fc33363b0fd8b2 382 Pfam PF03562 MltA specific insert domain 93 259 9.7E-41 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 LK04_RS03285 2db4691a4581ac6135fc33363b0fd8b2 382 SUPERFAMILY SSF50685 25 355 4.88E-109 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LK04_RS03285 2db4691a4581ac6135fc33363b0fd8b2 382 Pfam PF06725 3D domain 279 356 1.0E-23 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 LK04_RS03285 2db4691a4581ac6135fc33363b0fd8b2 382 Gene3D G3DSA:2.40.40.10 168 355 3.5E-46 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LK04_RS03285 2db4691a4581ac6135fc33363b0fd8b2 382 Gene3D G3DSA:2.40.40.10 77 164 4.3E-14 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LK04_RS03285 2db4691a4581ac6135fc33363b0fd8b2 382 PANTHER PTHR30124:SF0 1 358 4.4E-131 T 22-04-2016 LK04_RS03285 2db4691a4581ac6135fc33363b0fd8b2 382 PANTHER PTHR30124 1 358 4.4E-131 T 22-04-2016 LK04_RS11805 d01d4f33287965340f740f0d455bc280 108 PANTHER PTHR37010 1 108 3.4E-59 T 22-04-2016 LK04_RS11805 d01d4f33287965340f740f0d455bc280 108 SUPERFAMILY SSF69721 3 108 1.44E-40 T 22-04-2016 IPR025526 DsrC-like domain LK04_RS11805 d01d4f33287965340f740f0d455bc280 108 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 108 1.1E-50 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE LK04_RS11805 d01d4f33287965340f740f0d455bc280 108 Gene3D G3DSA:1.10.10.370 39 108 5.5E-38 T 22-04-2016 LK04_RS11805 d01d4f33287965340f740f0d455bc280 108 PIRSF PIRSF006223 1 108 2.2E-46 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE LK04_RS11805 d01d4f33287965340f740f0d455bc280 108 Gene3D G3DSA:3.30.1420.10 2 38 1.1E-11 T 22-04-2016 LK04_RS11805 d01d4f33287965340f740f0d455bc280 108 Pfam PF04358 DsrC like protein 3 108 2.5E-46 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE LK04_RS11805 d01d4f33287965340f740f0d455bc280 108 PANTHER PTHR37010:SF1 1 108 3.4E-59 T 22-04-2016 LK04_RS02615 57a9f84f8314cef833981ac961622d31 340 Gene3D G3DSA:3.40.1570.10 201 336 6.8E-9 T 22-04-2016 LK04_RS02615 57a9f84f8314cef833981ac961622d31 340 SUPERFAMILY SSF144064 4 336 8.24E-126 T 22-04-2016 LK04_RS02615 57a9f84f8314cef833981ac961622d31 340 Pfam PF05171 Haemin-degrading HemS.ChuX domain 28 156 4.3E-39 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 LK04_RS02615 57a9f84f8314cef833981ac961622d31 340 Pfam PF05171 Haemin-degrading HemS.ChuX domain 204 336 2.1E-40 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 LK04_RS16335 bbabd6899514c54996bc1acc9fc8eeac 168 PANTHER PTHR23091:SF237 1 127 5.6E-18 T 22-04-2016 LK04_RS16335 bbabd6899514c54996bc1acc9fc8eeac 168 Gene3D G3DSA:3.40.630.30 16 127 2.4E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS16335 bbabd6899514c54996bc1acc9fc8eeac 168 SUPERFAMILY SSF55729 1 156 1.01E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS16335 bbabd6899514c54996bc1acc9fc8eeac 168 PANTHER PTHR23091 1 127 5.6E-18 T 22-04-2016 LK04_RS16335 bbabd6899514c54996bc1acc9fc8eeac 168 Pfam PF13508 Acetyltransferase (GNAT) domain 45 124 8.8E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS18225 4bf30c5baee51f12c2193bf6160e7637 257 SMART SM00052 18 248 9.7E-23 T 22-04-2016 IPR001633 EAL domain LK04_RS18225 4bf30c5baee51f12c2193bf6160e7637 257 Pfam PF00563 EAL domain 27 243 5.5E-31 T 22-04-2016 IPR001633 EAL domain LK04_RS18225 4bf30c5baee51f12c2193bf6160e7637 257 PANTHER PTHR33121:SF6 1 256 5.1E-102 T 22-04-2016 LK04_RS18225 4bf30c5baee51f12c2193bf6160e7637 257 PANTHER PTHR33121 1 256 5.1E-102 T 22-04-2016 LK04_RS18225 4bf30c5baee51f12c2193bf6160e7637 257 SUPERFAMILY SSF141868 25 254 2.09E-35 T 22-04-2016 IPR001633 EAL domain LK04_RS18225 4bf30c5baee51f12c2193bf6160e7637 257 Gene3D G3DSA:3.20.20.450 32 253 2.3E-31 T 22-04-2016 IPR001633 EAL domain LK04_RS03510 51835cf4001ba85b3a8e96d86e1f271f 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 2 340 27.431 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03510 51835cf4001ba85b3a8e96d86e1f271f 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 185 335 2.3E-16 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03510 51835cf4001ba85b3a8e96d86e1f271f 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 5 164 5.6E-42 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03510 51835cf4001ba85b3a8e96d86e1f271f 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 4 337 5.3E-73 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03510 51835cf4001ba85b3a8e96d86e1f271f 347 PANTHER PTHR13326 1 336 7.8E-74 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03510 51835cf4001ba85b3a8e96d86e1f271f 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 74 87 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03510 51835cf4001ba85b3a8e96d86e1f271f 347 SUPERFAMILY SSF55120 3 336 3.16E-97 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 3.7E-98 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 Pfam PF12404 Peptidase 6 82 2.5E-35 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 PIRSF PIRSF036388 2 428 2.4E-228 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 Gene3D G3DSA:3.40.630.10 100 427 4.4E-113 T 22-04-2016 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 SUPERFAMILY SSF53187 108 427 1.88E-101 T 22-04-2016 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 Hamap MF_00504 Peptidase B [pepB]. 4 428 65.389 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 PANTHER PTHR11963 45 427 4.4E-253 T 22-04-2016 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 5.4E-46 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 5.4E-46 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 5.4E-46 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 5.4E-46 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 5.4E-46 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 PANTHER PTHR11963:SF20 45 427 4.4E-253 T 22-04-2016 LK04_RS04155 f80253cdd93db46027e978342c6dc288 428 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 326 338 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 Gene3D G3DSA:3.40.50.300 193 374 1.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 Gene3D G3DSA:1.10.1780.10 12 125 3.5E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 SMART SM01086 778 871 3.8E-11 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 PANTHER PTHR11638 1 127 0.0 T 22-04-2016 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 PANTHER PTHR11638 167 855 0.0 T 22-04-2016 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 656 674 1.2E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 718 732 1.2E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 685 703 1.2E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 611 629 1.2E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 SUPERFAMILY SSF52540 192 526 1.78E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 SMART SM00382 607 778 4.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 SMART SM00382 230 375 5.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 Gene3D G3DSA:3.40.50.300 561 789 2.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 SUPERFAMILY SSF81923 13 125 9.68E-16 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 Gene3D G3DSA:1.10.8.60 790 861 9.5E-12 T 22-04-2016 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 70 0.0036 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 SUPERFAMILY SSF52540 556 849 3.56E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 Gene3D G3DSA:1.10.8.60 377 460 3.9E-31 T 22-04-2016 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 PANTHER PTHR11638:SF11 1 127 0.0 T 22-04-2016 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 PANTHER PTHR11638:SF11 167 855 0.0 T 22-04-2016 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 235 347 1.6E-8 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 778 853 2.8E-13 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 Pfam PF07724 AAA domain (Cdc48 subfamily) 607 772 3.3E-39 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS15770 de65dadd4d862538cc8613a25cbdda3e 881 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 861 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 LK04_RS11780 ded65b3370616f0f3efff586a4f90d5a 457 PANTHER PTHR11699:SF205 1 455 1.1E-260 T 22-04-2016 LK04_RS11780 ded65b3370616f0f3efff586a4f90d5a 457 Pfam PF00171 Aldehyde dehydrogenase family 4 453 2.0E-130 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS11780 ded65b3370616f0f3efff586a4f90d5a 457 Gene3D G3DSA:3.40.605.10 4 241 1.4E-64 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS11780 ded65b3370616f0f3efff586a4f90d5a 457 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 257 268 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LK04_RS11780 ded65b3370616f0f3efff586a4f90d5a 457 SUPERFAMILY SSF53720 4 455 1.96E-135 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS11780 ded65b3370616f0f3efff586a4f90d5a 457 PANTHER PTHR11699 1 455 1.1E-260 T 22-04-2016 LK04_RS11780 ded65b3370616f0f3efff586a4f90d5a 457 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 229 236 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LK04_RS11780 ded65b3370616f0f3efff586a4f90d5a 457 Gene3D G3DSA:3.40.309.10 242 428 2.7E-60 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 4 404 9.8E-102 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 Pfam PF00326 Prolyl oligopeptidase family 464 675 4.2E-66 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 501 520 1.8E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 607 629 1.8E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 473 497 1.8E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 447 465 1.8E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 589 604 1.8E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 531 551 1.8E-48 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 Gene3D G3DSA:2.130.10.120 74 408 4.3E-92 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 PANTHER PTHR11757:SF3 4 684 0.0 T 22-04-2016 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 SUPERFAMILY SSF50993 2 409 4.18E-83 T 22-04-2016 LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 Gene3D G3DSA:3.40.50.1820 416 655 3.2E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 SUPERFAMILY SSF53474 415 656 7.67E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS07485 e523bc55ed963720a13fb057c81fd371 687 PANTHER PTHR11757 4 684 0.0 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LK04_RS10880 4114b666fba9ae7a4a981ac5cbf06bb2 184 SMART SM00903 15 165 3.4E-16 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LK04_RS10880 4114b666fba9ae7a4a981ac5cbf06bb2 184 SUPERFAMILY SSF50475 4 167 8.83E-39 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS10880 4114b666fba9ae7a4a981ac5cbf06bb2 184 Gene3D G3DSA:2.30.110.10 6 168 8.9E-42 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS10880 4114b666fba9ae7a4a981ac5cbf06bb2 184 PANTHER PTHR30466:SF6 5 174 7.3E-40 T 22-04-2016 LK04_RS10880 4114b666fba9ae7a4a981ac5cbf06bb2 184 PANTHER PTHR30466 5 174 7.3E-40 T 22-04-2016 LK04_RS10880 4114b666fba9ae7a4a981ac5cbf06bb2 184 Pfam PF01613 Flavin reductase like domain 17 160 6.7E-25 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LK04_RS06745 321b8c8c6bd77f905f5cfa8193574fe8 431 Pfam PF00860 Permease family 17 391 1.1E-56 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS06745 321b8c8c6bd77f905f5cfa8193574fe8 431 PIRSF PIRSF005353 1 431 4.5E-179 T 22-04-2016 IPR026033 Purine permease PbuG-like LK04_RS06745 321b8c8c6bd77f905f5cfa8193574fe8 431 PANTHER PTHR11119 1 418 7.3E-174 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS06745 321b8c8c6bd77f905f5cfa8193574fe8 431 PANTHER PTHR11119:SF9 1 418 7.3E-174 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 LK04_RS05535 112cfef10501a6784d86831e46b12640 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 1.7E-20 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 LK04_RS05535 112cfef10501a6784d86831e46b12640 100 PANTHER PTHR11434 3 100 2.4E-62 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 LK04_RS05535 112cfef10501a6784d86831e46b12640 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.149 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 LK04_RS05535 112cfef10501a6784d86831e46b12640 100 PANTHER PTHR11434:SF4 3 100 2.4E-62 T 22-04-2016 LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 1.3E-245 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 5.2E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 Gene3D G3DSA:3.40.50.300 144 331 3.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 SUPERFAMILY SSF52540 141 391 1.03E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 Pfam PF06480 FtsH Extracellular 5 93 1.4E-16 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 Pfam PF01434 Peptidase family M41 382 591 5.8E-81 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 Gene3D G3DSA:1.10.8.60 332 406 1.6E-28 T 22-04-2016 LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 SMART SM00382 184 323 1.9E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 PANTHER PTHR23076 1 629 0.0 T 22-04-2016 LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 SUPERFAMILY SSF140990 402 602 1.96E-71 T 22-04-2016 LK04_RS16440 9b29cad3871dd75910c9a2a9f164c5db 643 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 616 37.317 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 Gene3D G3DSA:1.10.287.130 223 288 3.9E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 Gene3D G3DSA:3.30.565.10 292 442 1.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 SUPERFAMILY SSF47384 217 291 8.63E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 1.2E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 Pfam PF00672 HAMP domain 162 226 2.3E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 4.8E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 SMART SM00387 332 440 2.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 SMART SM00388 233 293 1.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 SUPERFAMILY SSF55874 292 440 1.05E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 SMART SM00304 180 232 5.9E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 PANTHER PTHR24423 174 440 2.8E-58 T 22-04-2016 LK04_RS00570 fbde2e1691f73ad82d9871a924c92ad1 452 PANTHER PTHR24423 1 12 2.8E-58 T 22-04-2016 LK04_RS05115 362eb49455f7256d2f5eb2ed39310093 357 Gene3D G3DSA:3.30.1920.10 201 272 1.7E-25 T 22-04-2016 IPR023399 Baseplate-like protein, two-layer sandwich domain LK04_RS05115 362eb49455f7256d2f5eb2ed39310093 357 SUPERFAMILY SSF69279 179 343 2.61E-52 T 22-04-2016 LK04_RS05115 362eb49455f7256d2f5eb2ed39310093 357 Gene3D G3DSA:3.55.50.10 106 176 3.2E-24 T 22-04-2016 LK04_RS05115 362eb49455f7256d2f5eb2ed39310093 357 Gene3D G3DSA:2.30.300.10 3 105 1.0E-71 T 22-04-2016 LK04_RS05115 362eb49455f7256d2f5eb2ed39310093 357 Gene3D G3DSA:2.30.300.10 276 351 1.0E-71 T 22-04-2016 LK04_RS05115 362eb49455f7256d2f5eb2ed39310093 357 SUPERFAMILY SSF69279 2 176 1.76E-48 T 22-04-2016 LK04_RS05115 362eb49455f7256d2f5eb2ed39310093 357 PIRSF PIRSF004440 1 356 4.9E-100 T 22-04-2016 IPR026276 Baseplate protein GpP LK04_RS05730 feb420da537aab62bb8998011a14b4de 602 PANTHER PTHR30290 1 355 2.5E-211 T 22-04-2016 LK04_RS05730 feb420da537aab62bb8998011a14b4de 602 PANTHER PTHR30290 380 600 2.5E-211 T 22-04-2016 LK04_RS05730 feb420da537aab62bb8998011a14b4de 602 SUPERFAMILY SSF53850 50 591 4.71E-111 T 22-04-2016 LK04_RS05730 feb420da537aab62bb8998011a14b4de 602 PANTHER PTHR30290:SF2 1 355 2.5E-211 T 22-04-2016 LK04_RS05730 feb420da537aab62bb8998011a14b4de 602 PANTHER PTHR30290:SF2 380 600 2.5E-211 T 22-04-2016 LK04_RS05730 feb420da537aab62bb8998011a14b4de 602 Gene3D G3DSA:3.40.190.10 159 320 4.0E-30 T 22-04-2016 LK04_RS05730 feb420da537aab62bb8998011a14b4de 602 Gene3D G3DSA:3.10.105.10 321 560 6.1E-50 T 22-04-2016 LK04_RS05730 feb420da537aab62bb8998011a14b4de 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 503 1.2E-69 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS05730 feb420da537aab62bb8998011a14b4de 602 PIRSF PIRSF002741 8 593 2.5E-133 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS17460 3180e4436f13a52d78f00d77eeed1bad 295 PANTHER PTHR32243:SF13 5 293 1.3E-109 T 22-04-2016 LK04_RS17460 3180e4436f13a52d78f00d77eeed1bad 295 PANTHER PTHR32243 5 293 1.3E-109 T 22-04-2016 LK04_RS17460 3180e4436f13a52d78f00d77eeed1bad 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 290 2.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17460 3180e4436f13a52d78f00d77eeed1bad 295 SUPERFAMILY SSF161098 56 283 6.41E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17460 3180e4436f13a52d78f00d77eeed1bad 295 Gene3D G3DSA:1.10.3720.10 62 291 1.1E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS11935 2f8e563b829efdcae9cf527c91d96985 326 PANTHER PTHR22916 1 313 9.8E-40 T 22-04-2016 LK04_RS11935 2f8e563b829efdcae9cf527c91d96985 326 Gene3D G3DSA:3.90.550.10 2 197 6.8E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS11935 2f8e563b829efdcae9cf527c91d96985 326 Pfam PF00535 Glycosyl transferase family 2 7 138 2.2E-29 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS11935 2f8e563b829efdcae9cf527c91d96985 326 SUPERFAMILY SSF53448 5 227 4.41E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS01190 33f3c17a4328497b2e1695ca33080b51 344 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 277 1.1E-116 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 LK04_RS01190 33f3c17a4328497b2e1695ca33080b51 344 PIRSF PIRSF038471 2 284 2.4E-77 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 LK04_RS01190 33f3c17a4328497b2e1695ca33080b51 344 Pfam PF04085 rod shape-determining protein MreC 123 269 9.6E-37 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 LK04_RS01190 33f3c17a4328497b2e1695ca33080b51 344 PANTHER PTHR34138 1 344 1.8E-100 T 22-04-2016 LK04_RS01190 33f3c17a4328497b2e1695ca33080b51 344 PANTHER PTHR34138:SF1 1 344 1.8E-100 T 22-04-2016 LK04_RS15120 b3a6bc95b57d8f6ccc01d83bd6b72f05 264 PANTHER PTHR20881:SF3 1 264 1.2E-184 T 22-04-2016 LK04_RS15120 b3a6bc95b57d8f6ccc01d83bd6b72f05 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.512 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS15120 b3a6bc95b57d8f6ccc01d83bd6b72f05 264 Gene3D G3DSA:3.20.20.60 1 264 1.4E-111 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS15120 b3a6bc95b57d8f6ccc01d83bd6b72f05 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 1.7E-107 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS15120 b3a6bc95b57d8f6ccc01d83bd6b72f05 264 PIRSF PIRSF000388 1 264 2.2E-98 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS15120 b3a6bc95b57d8f6ccc01d83bd6b72f05 264 SUPERFAMILY SSF51621 4 263 3.36E-105 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS15120 b3a6bc95b57d8f6ccc01d83bd6b72f05 264 PANTHER PTHR20881 1 264 1.2E-184 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS15120 b3a6bc95b57d8f6ccc01d83bd6b72f05 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 1.6E-122 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 156 176 1.3E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 1.3E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 1.3E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.3E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 PANTHER PTHR18901 1 223 3.6E-74 T 22-04-2016 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 SUPERFAMILY SSF56784 4 223 2.76E-57 T 22-04-2016 IPR023214 HAD-like domain LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 223 1.4E-73 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 72 193 8.8E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 Gene3D G3DSA:1.10.150.240 22 84 8.9E-22 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 224 33.882 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 188 4.7E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 PANTHER PTHR18901:SF14 1 223 3.6E-74 T 22-04-2016 LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 193 3.0E-34 T 22-04-2016 IPR023214 HAD-like domain LK04_RS00660 b31a4435b3efd8150bb27aa5fcd73038 225 Gene3D G3DSA:3.40.50.1000 85 223 2.2E-42 T 22-04-2016 IPR023214 HAD-like domain LK04_RS10065 d20364ea1ff1d5461648dbdd73e9c492 327 PANTHER PTHR30036:SF1 1 326 2.1E-125 T 22-04-2016 LK04_RS10065 d20364ea1ff1d5461648dbdd73e9c492 327 Gene3D G3DSA:3.40.50.2300 149 297 2.4E-53 T 22-04-2016 LK04_RS10065 d20364ea1ff1d5461648dbdd73e9c492 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 1.4E-89 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LK04_RS10065 d20364ea1ff1d5461648dbdd73e9c492 327 SUPERFAMILY SSF53822 26 324 1.65E-68 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS10065 d20364ea1ff1d5461648dbdd73e9c492 327 Gene3D G3DSA:3.40.50.2300 25 148 7.4E-45 T 22-04-2016 LK04_RS10065 d20364ea1ff1d5461648dbdd73e9c492 327 PANTHER PTHR30036 1 326 2.1E-125 T 22-04-2016 LK04_RS10065 d20364ea1ff1d5461648dbdd73e9c492 327 PIRSF PIRSF002816 1 326 2.5E-151 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 SUPERFAMILY SSF53850 1 242 6.59E-76 T 22-04-2016 LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 Gene3D G3DSA:3.40.190.10 110 201 5.8E-30 T 22-04-2016 LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 4.3E-72 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 2 241 1.7E-92 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 PANTHER PTHR18966 20 243 1.2E-136 T 22-04-2016 LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 Gene3D G3DSA:3.40.190.10 20 108 2.0E-47 T 22-04-2016 LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 Gene3D G3DSA:3.40.190.10 203 242 2.0E-47 T 22-04-2016 LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 SMART SM00062 22 241 3.2E-89 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 SMART SM00079 22 243 7.0E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LK04_RS12225 ab367e2df9ca9f5101c05d1104c6c885 243 PANTHER PTHR18966:SF194 20 243 1.2E-136 T 22-04-2016 LK04_RS19485 0c8dfba2f6db3b309d553a4e2555babd 433 PANTHER PTHR21666:SF213 25 433 7.7E-164 T 22-04-2016 LK04_RS19485 0c8dfba2f6db3b309d553a4e2555babd 433 Gene3D G3DSA:2.70.70.10 295 432 1.7E-37 T 22-04-2016 LK04_RS19485 0c8dfba2f6db3b309d553a4e2555babd 433 SUPERFAMILY SSF51261 247 431 2.22E-47 T 22-04-2016 IPR011055 Duplicated hybrid motif LK04_RS19485 0c8dfba2f6db3b309d553a4e2555babd 433 Pfam PF01551 Peptidase family M23 334 427 2.9E-26 T 22-04-2016 IPR016047 Peptidase M23 LK04_RS19485 0c8dfba2f6db3b309d553a4e2555babd 433 PANTHER PTHR21666 25 433 7.7E-164 T 22-04-2016 LK04_RS12645 3a569158c927b3a00313aa788b9d3f41 244 SMART SM00422 4 73 3.3E-29 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS12645 3a569158c927b3a00313aa788b9d3f41 244 Gene3D G3DSA:1.10.1660.10 4 88 8.8E-22 T 22-04-2016 LK04_RS12645 3a569158c927b3a00313aa788b9d3f41 244 PANTHER PTHR30204 1 238 2.6E-70 T 22-04-2016 LK04_RS12645 3a569158c927b3a00313aa788b9d3f41 244 SUPERFAMILY SSF46955 3 89 3.8E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain LK04_RS12645 3a569158c927b3a00313aa788b9d3f41 244 Pfam PF13411 MerR HTH family regulatory protein 4 72 2.0E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS12645 3a569158c927b3a00313aa788b9d3f41 244 PANTHER PTHR30204:SF19 1 238 2.6E-70 T 22-04-2016 LK04_RS12645 3a569158c927b3a00313aa788b9d3f41 244 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS02635 e3ea40e39c32c809a8bf5ea5b4f544b7 327 PANTHER PTHR11695 16 325 5.2E-136 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS02635 e3ea40e39c32c809a8bf5ea5b4f544b7 327 SUPERFAMILY SSF51735 117 290 1.16E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02635 e3ea40e39c32c809a8bf5ea5b4f544b7 327 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 1.1E-127 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI LK04_RS02635 e3ea40e39c32c809a8bf5ea5b4f544b7 327 Pfam PF00107 Zinc-binding dehydrogenase 159 284 5.0E-10 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS02635 e3ea40e39c32c809a8bf5ea5b4f544b7 327 PANTHER PTHR11695:SF13 16 325 5.2E-136 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI LK04_RS02635 e3ea40e39c32c809a8bf5ea5b4f544b7 327 SMART SM00829 13 324 2.6E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS02635 e3ea40e39c32c809a8bf5ea5b4f544b7 327 Gene3D G3DSA:3.90.180.10 2 71 6.5E-6 T 22-04-2016 IPR011032 GroES-like LK04_RS02635 e3ea40e39c32c809a8bf5ea5b4f544b7 327 SUPERFAMILY SSF50129 2 145 4.23E-36 T 22-04-2016 IPR011032 GroES-like LK04_RS02635 e3ea40e39c32c809a8bf5ea5b4f544b7 327 Gene3D G3DSA:3.40.50.720 126 290 6.3E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS11315 04df332a9ca9647a3e7393507a8f34b1 317 PANTHER PTHR18919:SF109 26 317 9.6E-131 T 22-04-2016 LK04_RS11315 04df332a9ca9647a3e7393507a8f34b1 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 2 317 2.9E-145 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LK04_RS11315 04df332a9ca9647a3e7393507a8f34b1 317 SUPERFAMILY SSF53901 3 317 4.64E-70 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11315 04df332a9ca9647a3e7393507a8f34b1 317 Gene3D G3DSA:3.40.47.10 4 160 2.3E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11315 04df332a9ca9647a3e7393507a8f34b1 317 PANTHER PTHR18919 26 317 9.6E-131 T 22-04-2016 LK04_RS11315 04df332a9ca9647a3e7393507a8f34b1 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 3.7E-36 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LK04_RS11315 04df332a9ca9647a3e7393507a8f34b1 317 Gene3D G3DSA:3.40.47.10 161 316 2.4E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11315 04df332a9ca9647a3e7393507a8f34b1 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 69.695 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LK04_RS11315 04df332a9ca9647a3e7393507a8f34b1 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 5.4E-31 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LK04_RS15855 d4fd5953934491712eba26027538eb82 639 SUPERFAMILY SSF48435 23 471 1.31E-129 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 LK04_RS15855 d4fd5953934491712eba26027538eb82 639 Pfam PF01464 Transglycosylase SLT domain 478 591 7.5E-32 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 LK04_RS15855 d4fd5953934491712eba26027538eb82 639 Gene3D G3DSA:1.10.1240.20 399 466 5.1E-28 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 LK04_RS15855 d4fd5953934491712eba26027538eb82 639 Gene3D G3DSA:1.25.20.10 24 383 5.4E-119 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 LK04_RS15855 d4fd5953934491712eba26027538eb82 639 Gene3D G3DSA:1.10.530.10 469 630 7.8E-54 T 22-04-2016 LK04_RS15855 d4fd5953934491712eba26027538eb82 639 PANTHER PTHR21666:SF184 457 639 5.7E-92 T 22-04-2016 LK04_RS15855 d4fd5953934491712eba26027538eb82 639 SUPERFAMILY SSF53955 473 630 2.28E-52 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS15855 d4fd5953934491712eba26027538eb82 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 401 466 2.0E-23 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 LK04_RS15855 d4fd5953934491712eba26027538eb82 639 PANTHER PTHR21666 457 639 5.7E-92 T 22-04-2016 LK04_RS15855 d4fd5953934491712eba26027538eb82 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LK04_RS12110 abd8f687f2793150c78df0dde2a9be01 246 Pfam PF04055 Radical SAM superfamily 24 178 4.2E-31 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS12110 abd8f687f2793150c78df0dde2a9be01 246 Gene3D G3DSA:3.80.30.10 69 246 4.9E-70 T 22-04-2016 LK04_RS12110 abd8f687f2793150c78df0dde2a9be01 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 3.8E-107 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 LK04_RS12110 abd8f687f2793150c78df0dde2a9be01 246 Pfam PF13353 4Fe-4S single cluster domain 16 125 5.6E-17 T 22-04-2016 LK04_RS12110 abd8f687f2793150c78df0dde2a9be01 246 PANTHER PTHR30352 1 246 1.7E-152 T 22-04-2016 LK04_RS12110 abd8f687f2793150c78df0dde2a9be01 246 SUPERFAMILY SSF102114 23 216 4.71E-24 T 22-04-2016 LK04_RS12110 abd8f687f2793150c78df0dde2a9be01 246 PANTHER PTHR30352:SF9 1 246 1.7E-152 T 22-04-2016 LK04_RS12110 abd8f687f2793150c78df0dde2a9be01 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 LK04_RS02415 daf6560a133d9a077de0d12e1c826069 302 SUPERFAMILY SSF46785 2 79 6.74E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02415 daf6560a133d9a077de0d12e1c826069 302 SUPERFAMILY SSF53850 88 298 6.21E-34 T 22-04-2016 LK04_RS02415 daf6560a133d9a077de0d12e1c826069 302 Pfam PF03466 LysR substrate binding domain 89 293 2.0E-34 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS02415 daf6560a133d9a077de0d12e1c826069 302 Gene3D G3DSA:1.10.10.10 2 79 3.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02415 daf6560a133d9a077de0d12e1c826069 302 Gene3D G3DSA:3.40.190.10 176 263 1.1E-31 T 22-04-2016 LK04_RS02415 daf6560a133d9a077de0d12e1c826069 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.4E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02415 daf6560a133d9a077de0d12e1c826069 302 PANTHER PTHR30346:SF0 1 291 1.3E-69 T 22-04-2016 LK04_RS02415 daf6560a133d9a077de0d12e1c826069 302 PANTHER PTHR30346 1 291 1.3E-69 T 22-04-2016 LK04_RS02415 daf6560a133d9a077de0d12e1c826069 302 Gene3D G3DSA:3.40.190.10 90 175 1.1E-17 T 22-04-2016 LK04_RS11110 01af2b6de760b0198180e9501fb18a16 131 Gene3D G3DSA:1.10.1220.10 89 130 2.0E-4 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LK04_RS11110 01af2b6de760b0198180e9501fb18a16 131 SUPERFAMILY SSF143100 1 62 1.09E-13 T 22-04-2016 LK04_RS11110 01af2b6de760b0198180e9501fb18a16 131 PANTHER PTHR34873:SF2 1 131 2.3E-36 T 22-04-2016 LK04_RS11110 01af2b6de760b0198180e9501fb18a16 131 PANTHER PTHR34873 1 131 2.3E-36 T 22-04-2016 LK04_RS11110 01af2b6de760b0198180e9501fb18a16 131 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 124 1.9E-34 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system LK04_RS10255 6f0443cc80655a01b17cc6caba67ad14 198 SUPERFAMILY SSF46689 4 77 7.18E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10255 6f0443cc80655a01b17cc6caba67ad14 198 SUPERFAMILY SSF48498 82 195 1.42E-19 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LK04_RS10255 6f0443cc80655a01b17cc6caba67ad14 198 Pfam PF16925 Bacterial transcriptional repressor C-terminal 85 191 3.4E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LK04_RS10255 6f0443cc80655a01b17cc6caba67ad14 198 PANTHER PTHR30055:SF20 1 195 3.0E-69 T 22-04-2016 LK04_RS10255 6f0443cc80655a01b17cc6caba67ad14 198 PANTHER PTHR30055 1 195 3.0E-69 T 22-04-2016 LK04_RS10255 6f0443cc80655a01b17cc6caba67ad14 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 3.0E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS10255 6f0443cc80655a01b17cc6caba67ad14 198 Gene3D G3DSA:1.10.357.10 9 197 1.3E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS19425 c9fb89fcd21797408566f40f075d1cba 316 Gene3D G3DSA:3.90.550.10 2 195 6.1E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS19425 c9fb89fcd21797408566f40f075d1cba 316 PANTHER PTHR22916:SF24 1 314 7.4E-84 T 22-04-2016 LK04_RS19425 c9fb89fcd21797408566f40f075d1cba 316 Pfam PF00535 Glycosyl transferase family 2 1 119 9.9E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS19425 c9fb89fcd21797408566f40f075d1cba 316 PANTHER PTHR22916 1 314 7.4E-84 T 22-04-2016 LK04_RS19425 c9fb89fcd21797408566f40f075d1cba 316 SUPERFAMILY SSF53448 2 222 4.59E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS08540 38632550de286cb595b45cca4b4e4fdc 463 PANTHER PTHR11785:SF77 1 462 1.1E-223 T 22-04-2016 LK04_RS08540 38632550de286cb595b45cca4b4e4fdc 463 PIRSF PIRSF006060 1 457 3.4E-49 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS08540 38632550de286cb595b45cca4b4e4fdc 463 Pfam PF13520 Amino acid permease 5 416 1.1E-74 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS08540 38632550de286cb595b45cca4b4e4fdc 463 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 462 3.3E-170 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 LK04_RS08540 38632550de286cb595b45cca4b4e4fdc 463 PANTHER PTHR11785 1 462 1.1E-223 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.719 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 Gene3D G3DSA:3.40.50.620 110 453 1.7E-116 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 SUPERFAMILY SSF52374 110 453 3.13E-96 T 22-04-2016 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 Pfam PF00750 tRNA synthetases class I (R) 106 446 6.8E-164 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 Gene3D G3DSA:3.30.1360.70 2 104 2.3E-34 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 1.3E-204 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 SUPERFAMILY SSF47323 454 576 8.5E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 2.2E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 2.2E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 2.2E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 2.2E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 SUPERFAMILY SSF55190 2 97 5.49E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 9 87 2.7E-21 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 PANTHER PTHR11956:SF1 1 576 3.0E-265 T 22-04-2016 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 SMART SM01016 1 87 5.2E-29 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 Gene3D G3DSA:1.10.730.10 454 576 5.6E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 Pfam PF05746 DALR anticodon binding domain 460 576 4.5E-35 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 PANTHER PTHR11956 1 576 3.0E-265 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LK04_RS07345 f9a090198d529d3364e6ff3f167e54df 576 SMART SM00836 460 576 5.6E-39 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LK04_RS16715 27884e6a8b6631f76baf0546e8392146 325 PANTHER PTHR22594 14 324 4.6E-152 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS16715 27884e6a8b6631f76baf0546e8392146 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 55.916 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 LK04_RS16715 27884e6a8b6631f76baf0546e8392146 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 1.4E-5 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LK04_RS16715 27884e6a8b6631f76baf0546e8392146 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 1.4E-5 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LK04_RS16715 27884e6a8b6631f76baf0546e8392146 325 SUPERFAMILY SSF55681 13 324 1.04E-82 T 22-04-2016 LK04_RS16715 27884e6a8b6631f76baf0546e8392146 325 Gene3D G3DSA:3.30.930.10 14 321 1.7E-74 T 22-04-2016 LK04_RS16715 27884e6a8b6631f76baf0546e8392146 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 8.7E-132 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 LK04_RS16715 27884e6a8b6631f76baf0546e8392146 325 PANTHER PTHR22594:SF7 14 324 4.6E-152 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 LK04_RS16715 27884e6a8b6631f76baf0546e8392146 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 322 7.1E-47 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS04670 8c67cbd6b7959a15e8e6a45467106677 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 9.6E-145 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 LK04_RS04670 8c67cbd6b7959a15e8e6a45467106677 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 LK04_RS04670 8c67cbd6b7959a15e8e6a45467106677 323 PANTHER PTHR10314 3 318 3.4E-161 T 22-04-2016 LK04_RS04670 8c67cbd6b7959a15e8e6a45467106677 323 PANTHER PTHR10314:SF110 3 318 3.4E-161 T 22-04-2016 LK04_RS04670 8c67cbd6b7959a15e8e6a45467106677 323 Gene3D G3DSA:3.40.50.1100 132 314 1.3E-72 T 22-04-2016 LK04_RS04670 8c67cbd6b7959a15e8e6a45467106677 323 Gene3D G3DSA:3.40.50.1100 36 131 2.8E-38 T 22-04-2016 LK04_RS04670 8c67cbd6b7959a15e8e6a45467106677 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 1.3E-69 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS04670 8c67cbd6b7959a15e8e6a45467106677 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 7.0E-137 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 LK04_RS04670 8c67cbd6b7959a15e8e6a45467106677 323 SUPERFAMILY SSF53686 3 317 1.44E-98 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 Gene3D G3DSA:3.40.50.300 9 264 1.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 SUPERFAMILY SSF52540 10 266 1.77E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 SMART SM00382 318 510 6.5E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 SMART SM00382 41 240 5.4E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 PANTHER PTHR24220 13 418 3.6E-101 T 22-04-2016 LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 SUPERFAMILY SSF52540 285 519 1.43E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 Gene3D G3DSA:3.40.50.300 285 540 1.9E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 PANTHER PTHR24220:SF574 13 418 3.6E-101 T 22-04-2016 LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 Pfam PF00005 ABC transporter 309 461 1.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06575 f40d5eae481f7db21b0f0142562a6dc0 554 Pfam PF00005 ABC transporter 33 190 8.3E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS16160 ae99285ec406705c107631721a8f0978 250 Gene3D G3DSA:1.10.10.10 21 102 2.9E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16160 ae99285ec406705c107631721a8f0978 250 SUPERFAMILY SSF46894 19 103 1.93E-11 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS16160 ae99285ec406705c107631721a8f0978 250 SMART SM00862 23 101 5.8E-11 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS16160 ae99285ec406705c107631721a8f0978 250 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 101 3.2E-10 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS04415 cc4ae385465b22507d10b78ca864c6fe 226 PANTHER PTHR34875:SF3 3 226 9.7E-75 T 22-04-2016 LK04_RS04415 cc4ae385465b22507d10b78ca864c6fe 226 Pfam PF13740 ACT domain 45 120 1.9E-24 T 22-04-2016 LK04_RS04415 cc4ae385465b22507d10b78ca864c6fe 226 Gene3D G3DSA:3.30.70.260 44 122 2.1E-31 T 22-04-2016 LK04_RS04415 cc4ae385465b22507d10b78ca864c6fe 226 SUPERFAMILY SSF55021 129 216 6.11E-17 T 22-04-2016 LK04_RS04415 cc4ae385465b22507d10b78ca864c6fe 226 SUPERFAMILY SSF55021 43 123 2.6E-16 T 22-04-2016 LK04_RS04415 cc4ae385465b22507d10b78ca864c6fe 226 Gene3D G3DSA:3.30.70.260 130 219 1.9E-34 T 22-04-2016 LK04_RS04415 cc4ae385465b22507d10b78ca864c6fe 226 PANTHER PTHR34875 3 226 9.7E-75 T 22-04-2016 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 444 43.324 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 SMART SM01086 336 432 4.9E-22 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 SMART SM00382 49 333 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 SUPERFAMILY SSF52540 3 442 5.45E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 336 406 1.2E-4 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 Gene3D G3DSA:1.10.8.60 336 444 1.0E-33 T 22-04-2016 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 PANTHER PTHR11262:SF3 1 105 1.0E-211 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 PANTHER PTHR11262:SF3 218 444 1.0E-211 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 444 2.9E-230 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 Pfam PF07724 AAA domain (Cdc48 subfamily) 185 330 1.2E-42 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 Gene3D G3DSA:1.10.8.10 111 177 2.3E-34 T 22-04-2016 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 Gene3D G3DSA:1.10.8.10 213 243 2.3E-34 T 22-04-2016 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 Gene3D G3DSA:3.40.50.300 3 110 3.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 Gene3D G3DSA:3.40.50.300 245 332 3.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 1.3E-6 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 PANTHER PTHR11262 1 105 1.0E-211 T 22-04-2016 LK04_RS19600 8c07dccc28ba262b474eb2b4396f6327 444 PANTHER PTHR11262 218 444 1.0E-211 T 22-04-2016 LK04_RS02360 0f3c2e8360d6662eb8f13f14493ab663 179 SUPERFAMILY SSF49401 30 178 2.54E-28 T 22-04-2016 IPR008966 Adhesion domain LK04_RS02360 0f3c2e8360d6662eb8f13f14493ab663 179 Pfam PF00419 Fimbrial protein 33 178 6.9E-8 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LK04_RS02360 0f3c2e8360d6662eb8f13f14493ab663 179 PANTHER PTHR33420 10 179 3.2E-23 T 22-04-2016 LK04_RS02360 0f3c2e8360d6662eb8f13f14493ab663 179 Gene3D G3DSA:2.60.40.1090 32 178 2.6E-32 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 PANTHER PTHR30385 16 236 5.4E-43 T 22-04-2016 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 PANTHER PTHR30385:SF7 16 236 5.4E-43 T 22-04-2016 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 3.0E-67 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 Gene3D G3DSA:1.10.601.10 15 82 1.9E-11 T 22-04-2016 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 Pfam PF04539 Sigma-70 region 3 97 158 5.8E-11 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 PRINTS PR00046 Major sigma-70 factor signature 221 232 3.7E-9 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 PRINTS PR00046 Major sigma-70 factor signature 43 56 3.7E-9 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 PRINTS PR00046 Major sigma-70 factor signature 189 201 3.7E-9 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 PRINTS PR00046 Major sigma-70 factor signature 206 221 3.7E-9 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 SUPERFAMILY SSF88946 15 88 3.14E-18 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 Pfam PF04545 Sigma-70, region 4 187 234 1.8E-11 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 Gene3D G3DSA:1.10.10.10 88 132 2.4E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 Gene3D G3DSA:1.10.10.10 176 237 2.1E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 Pfam PF04542 Sigma-70 region 2 16 88 3.3E-13 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 SUPERFAMILY SSF88659 89 156 3.58E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 SUPERFAMILY SSF88659 163 238 5.23E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16155 fef9f8cb683fe3caa225d9af136a6d42 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 236 2.8E-26 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS16390 97acc7f75cc607ca0dcffbd60b8c29c8 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 4.5E-55 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 LK04_RS16390 97acc7f75cc607ca0dcffbd60b8c29c8 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 4.7E-87 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS16390 97acc7f75cc607ca0dcffbd60b8c29c8 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 17.967 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS16390 97acc7f75cc607ca0dcffbd60b8c29c8 314 Gene3D G3DSA:2.30.130.10 251 311 1.0E-26 T 22-04-2016 IPR015947 PUA-like domain LK04_RS16390 97acc7f75cc607ca0dcffbd60b8c29c8 314 PANTHER PTHR13767 2 309 5.2E-130 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS16390 97acc7f75cc607ca0dcffbd60b8c29c8 314 PANTHER PTHR13767:SF2 2 309 5.2E-130 T 22-04-2016 LK04_RS16390 97acc7f75cc607ca0dcffbd60b8c29c8 314 SUPERFAMILY SSF88697 251 310 2.73E-13 T 22-04-2016 IPR015947 PUA-like domain LK04_RS16390 97acc7f75cc607ca0dcffbd60b8c29c8 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 2.2E-22 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal LK04_RS16390 97acc7f75cc607ca0dcffbd60b8c29c8 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 4.6E-18 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS16390 97acc7f75cc607ca0dcffbd60b8c29c8 314 SUPERFAMILY SSF55120 11 246 8.06E-79 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS11645 149d5b87169d7d163471ad65da1864ee 143 PANTHER PTHR33164 8 140 1.7E-20 T 22-04-2016 LK04_RS11645 149d5b87169d7d163471ad65da1864ee 143 SUPERFAMILY SSF46785 6 140 6.26E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS11645 149d5b87169d7d163471ad65da1864ee 143 SMART SM00347 25 126 6.4E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS11645 149d5b87169d7d163471ad65da1864ee 143 Pfam PF01047 MarR family 32 90 3.5E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS11645 149d5b87169d7d163471ad65da1864ee 143 PANTHER PTHR33164:SF16 8 140 1.7E-20 T 22-04-2016 LK04_RS11645 149d5b87169d7d163471ad65da1864ee 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.5E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS11645 149d5b87169d7d163471ad65da1864ee 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.5E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS11645 149d5b87169d7d163471ad65da1864ee 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.5E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS11645 149d5b87169d7d163471ad65da1864ee 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.5E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS11645 149d5b87169d7d163471ad65da1864ee 143 Gene3D G3DSA:1.10.10.10 6 141 9.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13180 81c0d0166a5975d1de7e78df54560c25 224 PANTHER PTHR26402:SF399 2 224 3.2E-105 T 22-04-2016 LK04_RS13180 81c0d0166a5975d1de7e78df54560c25 224 Gene3D G3DSA:3.40.50.2300 3 123 5.0E-38 T 22-04-2016 LK04_RS13180 81c0d0166a5975d1de7e78df54560c25 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 6.3E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS13180 81c0d0166a5975d1de7e78df54560c25 224 PANTHER PTHR26402 2 224 3.2E-105 T 22-04-2016 LK04_RS13180 81c0d0166a5975d1de7e78df54560c25 224 SMART SM00862 146 222 2.4E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS13180 81c0d0166a5975d1de7e78df54560c25 224 Pfam PF00072 Response regulator receiver domain 4 113 3.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS13180 81c0d0166a5975d1de7e78df54560c25 224 SMART SM00448 2 112 4.2E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS13180 81c0d0166a5975d1de7e78df54560c25 224 SUPERFAMILY SSF52172 3 176 3.08E-40 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS13180 81c0d0166a5975d1de7e78df54560c25 224 Gene3D G3DSA:1.10.10.10 124 223 7.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05220 f36361ba4b6e1a171cc40619247f690f 151 Pfam PF03918 Cytochrome C biogenesis protein 8 145 2.6E-55 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family LK04_RS05220 f36361ba4b6e1a171cc40619247f690f 151 PANTHER PTHR30009:SF6 11 148 1.0E-37 T 22-04-2016 LK04_RS05220 f36361ba4b6e1a171cc40619247f690f 151 PANTHER PTHR30009 11 148 1.0E-37 T 22-04-2016 LK04_RS13215 09c61085b555a52dcb1862eedd88a3a3 131 Gene3D G3DSA:3.10.450.50 8 131 1.8E-39 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS13215 09c61085b555a52dcb1862eedd88a3a3 131 SUPERFAMILY SSF54427 9 130 4.21E-26 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS13215 09c61085b555a52dcb1862eedd88a3a3 131 PIRSF PIRSF029394 3 131 1.7E-24 T 22-04-2016 IPR016918 Uncharacterised conserved protein UCP029394 LK04_RS12605 32b7c7725cb469e444e3e76d48494170 281 Pfam PF01522 Polysaccharide deacetylase 51 154 1.3E-20 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LK04_RS12605 32b7c7725cb469e444e3e76d48494170 281 PANTHER PTHR10587 42 164 7.1E-30 T 22-04-2016 LK04_RS12605 32b7c7725cb469e444e3e76d48494170 281 SUPERFAMILY SSF88713 4 277 2.43E-63 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LK04_RS12605 32b7c7725cb469e444e3e76d48494170 281 Gene3D G3DSA:3.20.20.370 3 278 2.2E-69 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 SUPERFAMILY SSF54980 398 512 9.11E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 SUPERFAMILY SSF54980 302 387 1.47E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 Gene3D G3DSA:3.30.70.240 400 478 9.9E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 Gene3D G3DSA:2.40.50.250 483 577 2.0E-40 T 22-04-2016 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 1.7E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 Pfam PF03144 Elongation factor Tu domain 2 219 289 5.6E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 Gene3D G3DSA:3.40.50.300 3 206 3.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 Gene3D G3DSA:3.30.70.870 304 399 1.6E-36 T 22-04-2016 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 Gene3D G3DSA:2.40.30.10 207 303 1.1E-25 T 22-04-2016 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 Pfam PF00009 Elongation factor Tu GTP binding domain 4 192 4.0E-57 T 22-04-2016 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 SUPERFAMILY SSF50447 151 299 5.74E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 PANTHER PTHR23115 3 593 3.9E-300 T 22-04-2016 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 SUPERFAMILY SSF52540 3 219 6.85E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 Pfam PF00679 Elongation factor G C-terminus 397 477 4.4E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 2.7E-290 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 LK04_RS19215 4817c48f7366209518324ffd105a4d7f 606 PANTHER PTHR23115:SF14 3 593 3.9E-300 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 LK04_RS06175 e47b36cc9d5c9757326e16ebd386e172 265 Gene3D G3DSA:3.40.190.10 219 262 5.0E-42 T 22-04-2016 LK04_RS06175 e47b36cc9d5c9757326e16ebd386e172 265 Gene3D G3DSA:3.40.190.10 32 118 5.0E-42 T 22-04-2016 LK04_RS06175 e47b36cc9d5c9757326e16ebd386e172 265 SMART SM00062 32 260 5.0E-76 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS06175 e47b36cc9d5c9757326e16ebd386e172 265 PANTHER PTHR18966 30 263 3.5E-72 T 22-04-2016 LK04_RS06175 e47b36cc9d5c9757326e16ebd386e172 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 258 9.8E-61 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS06175 e47b36cc9d5c9757326e16ebd386e172 265 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 55 68 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LK04_RS06175 e47b36cc9d5c9757326e16ebd386e172 265 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 12 257 1.2E-83 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 LK04_RS06175 e47b36cc9d5c9757326e16ebd386e172 265 Gene3D G3DSA:3.40.190.10 119 215 9.5E-28 T 22-04-2016 LK04_RS06175 e47b36cc9d5c9757326e16ebd386e172 265 SUPERFAMILY SSF53850 14 260 9.51E-66 T 22-04-2016 LK04_RS06175 e47b36cc9d5c9757326e16ebd386e172 265 PANTHER PTHR18966:SF237 30 263 3.5E-72 T 22-04-2016 LK04_RS16425 192c81da10354e8fd70a17f33d73b080 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 6.0E-22 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LK04_RS16425 192c81da10354e8fd70a17f33d73b080 111 PANTHER PTHR34182 2 111 7.0E-36 T 22-04-2016 LK04_RS16425 192c81da10354e8fd70a17f33d73b080 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.1E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LK04_RS16425 192c81da10354e8fd70a17f33d73b080 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 1.1E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LK04_RS16425 192c81da10354e8fd70a17f33d73b080 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.1E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LK04_RS16425 192c81da10354e8fd70a17f33d73b080 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.1E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LK04_RS16425 192c81da10354e8fd70a17f33d73b080 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 1.7E-27 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LK04_RS15560 28bcbbc4fd970a18c6ad2d864a66ddd8 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.709 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG LK04_RS15560 28bcbbc4fd970a18c6ad2d864a66ddd8 125 Gene3D G3DSA:2.60.40.1470 6 124 2.8E-46 T 22-04-2016 IPR007474 ApaG domain LK04_RS15560 28bcbbc4fd970a18c6ad2d864a66ddd8 125 PANTHER PTHR14289 6 120 2.8E-54 T 22-04-2016 LK04_RS15560 28bcbbc4fd970a18c6ad2d864a66ddd8 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 5.0E-34 T 22-04-2016 IPR007474 ApaG domain LK04_RS15560 28bcbbc4fd970a18c6ad2d864a66ddd8 125 SUPERFAMILY SSF110069 6 124 3.14E-47 T 22-04-2016 IPR007474 ApaG domain LK04_RS16860 7cd08473701fc64799718637af1684e5 389 PANTHER PTHR22604 9 388 2.6E-62 T 22-04-2016 LK04_RS16860 7cd08473701fc64799718637af1684e5 389 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 277 3.2E-8 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS16860 7cd08473701fc64799718637af1684e5 389 Gene3D G3DSA:3.30.360.10 332 383 9.9E-23 T 22-04-2016 LK04_RS16860 7cd08473701fc64799718637af1684e5 389 Gene3D G3DSA:3.30.360.10 164 286 9.9E-23 T 22-04-2016 LK04_RS16860 7cd08473701fc64799718637af1684e5 389 SUPERFAMILY SSF55347 150 326 1.8E-28 T 22-04-2016 LK04_RS16860 7cd08473701fc64799718637af1684e5 389 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 1.5E-24 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS16860 7cd08473701fc64799718637af1684e5 389 Gene3D G3DSA:3.40.50.720 9 163 4.1E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16860 7cd08473701fc64799718637af1684e5 389 PANTHER PTHR22604:SF123 9 388 2.6E-62 T 22-04-2016 LK04_RS16860 7cd08473701fc64799718637af1684e5 389 SUPERFAMILY SSF51735 7 173 2.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS03700 c761b38ed2ed49b208487733aab5dda7 326 Gene3D G3DSA:3.10.290.10 18 69 1.5E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS03700 c761b38ed2ed49b208487733aab5dda7 326 Pfam PF01479 S4 domain 18 63 9.1E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS03700 c761b38ed2ed49b208487733aab5dda7 326 SUPERFAMILY SSF55174 17 69 5.05E-11 T 22-04-2016 LK04_RS03700 c761b38ed2ed49b208487733aab5dda7 326 SUPERFAMILY SSF55120 77 322 9.59E-79 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03700 c761b38ed2ed49b208487733aab5dda7 326 PANTHER PTHR11079 6 323 3.7E-156 T 22-04-2016 LK04_RS03700 c761b38ed2ed49b208487733aab5dda7 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 5.3E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03700 c761b38ed2ed49b208487733aab5dda7 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03700 c761b38ed2ed49b208487733aab5dda7 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 312 6.2E-109 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03700 c761b38ed2ed49b208487733aab5dda7 326 SMART SM00363 18 76 1.2E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS03700 c761b38ed2ed49b208487733aab5dda7 326 PANTHER PTHR11079:SF73 6 323 3.7E-156 T 22-04-2016 LK04_RS18330 ecf7511dfb47d6065652215e28a56324 336 PANTHER PTHR24220:SF493 13 329 3.2E-212 T 22-04-2016 LK04_RS18330 ecf7511dfb47d6065652215e28a56324 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 1.4E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS18330 ecf7511dfb47d6065652215e28a56324 336 SMART SM00382 46 238 3.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS18330 ecf7511dfb47d6065652215e28a56324 336 PANTHER PTHR24220 13 329 3.2E-212 T 22-04-2016 LK04_RS18330 ecf7511dfb47d6065652215e28a56324 336 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS18330 ecf7511dfb47d6065652215e28a56324 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 323 5.0E-25 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS18330 ecf7511dfb47d6065652215e28a56324 336 Pfam PF00005 ABC transporter 37 188 9.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS18330 ecf7511dfb47d6065652215e28a56324 336 SUPERFAMILY SSF52540 12 260 5.07E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18330 ecf7511dfb47d6065652215e28a56324 336 Gene3D G3DSA:3.40.50.300 11 262 5.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 PANTHER PTHR11908:SF66 18 784 0.0 T 22-04-2016 LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 Gene3D G3DSA:3.30.365.10 366 457 3.1E-87 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 Gene3D G3DSA:3.30.365.10 624 778 3.1E-87 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 Gene3D G3DSA:3.30.365.10 181 288 9.2E-37 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 PANTHER PTHR11908 18 784 0.0 T 22-04-2016 LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 39 146 1.8E-23 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 Gene3D G3DSA:3.30.365.10 458 614 2.8E-53 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 SMART SM01008 39 146 6.7E-43 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 Gene3D G3DSA:3.90.1170.50 25 146 3.2E-38 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 Gene3D G3DSA:3.30.365.10 290 365 8.7E-23 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 Gene3D G3DSA:3.30.365.10 147 180 8.7E-23 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 SUPERFAMILY SSF56003 146 779 1.83E-208 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 25 780 0.0 T 22-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 SUPERFAMILY SSF54665 23 147 1.96E-38 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LK04_RS08790 ebea82475c1df8be8a1563e2744c065b 788 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 165 709 4.0E-210 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 SUPERFAMILY SSF161098 11 198 1.44E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 SUPERFAMILY SSF52540 251 484 1.73E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 PANTHER PTHR24220 254 496 1.4E-95 T 22-04-2016 LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 Gene3D G3DSA:3.40.50.300 251 495 4.0E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 SMART SM00382 277 473 1.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 Gene3D G3DSA:1.10.3720.10 10 210 8.8E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 6.4E-28 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 201 3.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 PANTHER PTHR24220:SF327 254 496 1.4E-95 T 22-04-2016 LK04_RS18590 2671a93c36a6ff61935e853b0275a3c6 508 Pfam PF00005 ABC transporter 268 425 5.8E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS07070 0b33f1385ae8326c2a2039dd394e3cef 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LK04_RS07070 0b33f1385ae8326c2a2039dd394e3cef 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 6.8E-72 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS07070 0b33f1385ae8326c2a2039dd394e3cef 266 Gene3D G3DSA:3.40.190.10 222 265 2.6E-46 T 22-04-2016 LK04_RS07070 0b33f1385ae8326c2a2039dd394e3cef 266 Gene3D G3DSA:3.40.190.10 39 119 2.6E-46 T 22-04-2016 LK04_RS07070 0b33f1385ae8326c2a2039dd394e3cef 266 PANTHER PTHR18966:SF189 1 264 1.3E-150 T 22-04-2016 LK04_RS07070 0b33f1385ae8326c2a2039dd394e3cef 266 Gene3D G3DSA:3.40.190.10 120 221 2.5E-31 T 22-04-2016 LK04_RS07070 0b33f1385ae8326c2a2039dd394e3cef 266 SMART SM00062 42 263 4.0E-87 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS07070 0b33f1385ae8326c2a2039dd394e3cef 266 SMART SM00079 42 262 6.9E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LK04_RS07070 0b33f1385ae8326c2a2039dd394e3cef 266 PANTHER PTHR18966 1 264 1.3E-150 T 22-04-2016 LK04_RS07070 0b33f1385ae8326c2a2039dd394e3cef 266 SUPERFAMILY SSF53850 15 264 6.08E-76 T 22-04-2016 LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 Gene3D G3DSA:2.40.170.20 181 698 3.7E-134 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 166 8.5E-23 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 PANTHER PTHR32552:SF21 53 698 4.6E-207 T 22-04-2016 LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 PANTHER PTHR32552:SF21 23 31 4.6E-207 T 22-04-2016 LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 Pfam PF00593 TonB dependent receptor 464 696 2.6E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 PANTHER PTHR32552 53 698 4.6E-207 T 22-04-2016 LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 PANTHER PTHR32552 23 31 4.6E-207 T 22-04-2016 LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 681 698 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 Gene3D G3DSA:2.170.130.10 40 174 2.0E-38 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 SUPERFAMILY SSF56935 22 698 1.56E-131 T 22-04-2016 LK04_RS10990 eaf91ae4595e204f2ff86f011910aa9f 698 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 698 5.2E-145 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 Gene3D G3DSA:3.30.1490.20 7 197 4.7E-66 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 791 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 Gene3D G3DSA:3.50.30.10 376 472 2.3E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 483 789 3.3E-58 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 PIRSF PIRSF000854 4 795 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 PANTHER PTHR22931:SF7 2 271 0.0 T 22-04-2016 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 PANTHER PTHR22931:SF7 287 791 0.0 T 22-04-2016 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 348 7.4E-116 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 Gene3D G3DSA:3.20.20.60 484 791 1.0E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 Gene3D G3DSA:3.30.470.20 199 355 3.7E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 SUPERFAMILY SSF51621 464 793 6.28E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 SUPERFAMILY SSF56059 7 385 2.12E-105 T 22-04-2016 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 2.5E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 PANTHER PTHR22931 2 271 0.0 T 22-04-2016 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 PANTHER PTHR22931 287 791 0.0 T 22-04-2016 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 SUPERFAMILY SSF52009 350 469 2.75E-35 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LK04_RS10395 9908a94c2233e8f11a71e5ef5c67df6a 795 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LK04_RS09490 945eda4628059a1bd91b7a96d04df95e 145 Gene3D G3DSA:3.40.930.10 3 145 1.5E-44 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS09490 945eda4628059a1bd91b7a96d04df95e 145 SUPERFAMILY SSF55804 10 145 4.84E-31 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LK04_RS09490 945eda4628059a1bd91b7a96d04df95e 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 145 4.1E-28 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS09490 945eda4628059a1bd91b7a96d04df95e 145 PANTHER PTHR36203 1 145 2.0E-34 T 22-04-2016 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 PANTHER PTHR11117 1 288 3.9E-195 T 22-04-2016 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 Pfam PF00549 CoA-ligase 151 271 1.8E-20 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 SMART SM00881 4 100 1.1E-34 T 22-04-2016 IPR003781 CoA-binding GO:0048037 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 SUPERFAMILY SSF51735 1 122 1.21E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 Pfam PF02629 CoA binding domain 6 99 9.1E-30 T 22-04-2016 IPR003781 CoA-binding GO:0048037 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 PIRSF PIRSF001553 1 290 2.8E-133 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 Gene3D G3DSA:3.40.50.720 2 119 3.8E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 SUPERFAMILY SSF52210 123 287 3.14E-57 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.1E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.1E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.1E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.1E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 Gene3D G3DSA:3.40.50.261 120 287 1.3E-77 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS13080 1cbcbe39930482d7634d366f2ecd2e3b 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 1.6E-144 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 Gene3D G3DSA:4.10.950.10 196 272 2.6E-34 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 SMART SM01382 124 251 7.8E-89 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 6.9E-34 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.074 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 SUPERFAMILY SSF50104 127 269 1.38E-59 T 22-04-2016 IPR008991 Translation protein SH3-like domain LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 SMART SM01383 42 118 2.1E-48 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 PANTHER PTHR13691 1 273 5.7E-146 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 1.4E-131 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 Gene3D G3DSA:2.40.50.140 1 114 8.9E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 SUPERFAMILY SSF50249 3 125 7.54E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 4.9E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 Gene3D G3DSA:2.30.30.30 119 195 1.7E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 LK04_RS00885 0d0790d51f28c7642811481172ce9f34 273 PIRSF PIRSF002158 12 273 1.3E-99 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS15090 e710768bb6a44e4b0d0204ec66717d3a 179 PANTHER PTHR35561:SF1 2 175 1.1E-47 T 22-04-2016 LK04_RS15090 e710768bb6a44e4b0d0204ec66717d3a 179 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 5 173 8.3E-40 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 LK04_RS15090 e710768bb6a44e4b0d0204ec66717d3a 179 SUPERFAMILY SSF55144 5 173 5.23E-42 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase LK04_RS15090 e710768bb6a44e4b0d0204ec66717d3a 179 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 4 173 22.264 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 LK04_RS15090 e710768bb6a44e4b0d0204ec66717d3a 179 Pfam PF02834 LigT like Phosphoesterase 10 88 1.9E-13 T 22-04-2016 IPR014051 Phosphoesterase, HXTX LK04_RS15090 e710768bb6a44e4b0d0204ec66717d3a 179 Pfam PF02834 LigT like Phosphoesterase 94 165 5.1E-6 T 22-04-2016 IPR014051 Phosphoesterase, HXTX LK04_RS15090 e710768bb6a44e4b0d0204ec66717d3a 179 Gene3D G3DSA:3.90.1140.10 4 173 4.8E-47 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase LK04_RS15090 e710768bb6a44e4b0d0204ec66717d3a 179 PANTHER PTHR35561 2 175 1.1E-47 T 22-04-2016 LK04_RS18050 9d4c090ef7c77599c39a1ce069ea3021 317 SUPERFAMILY SSF143865 1 256 1.7E-37 T 22-04-2016 LK04_RS18050 9d4c090ef7c77599c39a1ce069ea3021 317 PANTHER PTHR21535 7 317 1.1E-163 T 22-04-2016 LK04_RS18050 9d4c090ef7c77599c39a1ce069ea3021 317 SUPERFAMILY SSF144083 252 315 1.83E-20 T 22-04-2016 LK04_RS18050 9d4c090ef7c77599c39a1ce069ea3021 317 Gene3D G3DSA:1.20.58.340 241 317 2.7E-28 T 22-04-2016 LK04_RS18050 9d4c090ef7c77599c39a1ce069ea3021 317 PANTHER PTHR21535:SF37 7 317 1.1E-163 T 22-04-2016 LK04_RS18050 9d4c090ef7c77599c39a1ce069ea3021 317 Pfam PF01544 CorA-like Mg2+ transporter protein 27 313 1.0E-56 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 LK04_RS18050 9d4c090ef7c77599c39a1ce069ea3021 317 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 317 5.0E-110 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 LK04_RS06875 58f41076c0186b32268ccab08e808e99 77 Pfam PF10733 Protein of unknown function (DUF2525) 18 77 1.1E-31 T 22-04-2016 IPR019669 Uncharacterised bacterial stress protein YodD LK04_RS16060 30d2ce83635062b48742a42d01f1c02b 337 SUPERFAMILY SSF53448 58 213 6.19E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS16060 30d2ce83635062b48742a42d01f1c02b 337 Pfam PF05704 Capsular polysaccharide synthesis protein 55 199 5.5E-14 T 22-04-2016 IPR008441 Capsular polysaccharide synthesis LK04_RS12490 5e95b8a1f707756cc5b3975f1850193f 755 Pfam PF00924 Mechanosensitive ion channel 528 727 1.9E-42 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LK04_RS12490 5e95b8a1f707756cc5b3975f1850193f 755 PANTHER PTHR30460 12 736 1.2E-244 T 22-04-2016 LK04_RS12490 5e95b8a1f707756cc5b3975f1850193f 755 Gene3D G3DSA:3.30.70.100 646 726 2.0E-4 T 22-04-2016 LK04_RS12490 5e95b8a1f707756cc5b3975f1850193f 755 PANTHER PTHR30460:SF0 12 736 1.2E-244 T 22-04-2016 LK04_RS12490 5e95b8a1f707756cc5b3975f1850193f 755 SUPERFAMILY SSF50182 571 629 5.56E-10 T 22-04-2016 IPR010920 LSM domain LK04_RS12490 5e95b8a1f707756cc5b3975f1850193f 755 SUPERFAMILY SSF82689 643 736 4.32E-9 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LK04_RS12490 5e95b8a1f707756cc5b3975f1850193f 755 Gene3D G3DSA:2.30.30.60 589 629 1.6E-8 T 22-04-2016 LK04_RS12490 5e95b8a1f707756cc5b3975f1850193f 755 SUPERFAMILY SSF82861 489 569 5.62E-12 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 SUPERFAMILY SSF81301 22 285 1.23E-86 T 22-04-2016 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 SUPERFAMILY SSF81593 817 942 1.8E-31 T 22-04-2016 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 552 804 4.2E-99 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 271 7.8E-91 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 Pfam PF08335 GlnD PII-uridylyltransferase 824 915 3.9E-11 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 Pfam PF08335 GlnD PII-uridylyltransferase 296 435 1.5E-45 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 26 944 19.696 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 SUPERFAMILY SSF81593 286 435 1.73E-44 T 22-04-2016 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 Gene3D G3DSA:3.30.460.10 638 809 2.6E-61 T 22-04-2016 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 Gene3D G3DSA:3.30.460.10 112 284 2.6E-62 T 22-04-2016 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 PANTHER PTHR30621 32 941 0.0 T 22-04-2016 LK04_RS01945 16e99e6d7d7968a00baf6ee339becc98 951 SUPERFAMILY SSF81301 525 814 5.56E-87 T 22-04-2016 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 Gene3D G3DSA:2.40.50.140 988 1078 9.4E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 PANTHER PTHR32294 2 1160 0.0 T 22-04-2016 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 PANTHER PTHR32294:SF0 2 1160 0.0 T 22-04-2016 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1072 1.9E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 733 8.4E-179 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 Gene3D G3DSA:1.10.150.280 836 882 4.0E-6 T 22-04-2016 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 SMART SM00481 7 74 1.0E-24 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 SUPERFAMILY SSF89550 6 263 8.24E-14 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 1.7E-24 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 Gene3D G3DSA:3.20.20.140 6 257 3.3E-18 T 22-04-2016 LK04_RS14910 f67c3341fd144db26b7f79a023e9c816 1160 Pfam PF02811 PHP domain 8 172 3.5E-41 T 22-04-2016 IPR004013 PHP domain GO:0003824 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 Hamap MF_01151 Protein GrpE [grpE]. 3 189 21.315 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 PRINTS PR00773 GrpE protein signature 141 156 9.8E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 PRINTS PR00773 GrpE protein signature 86 101 9.8E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 PRINTS PR00773 GrpE protein signature 168 187 9.8E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 PRINTS PR00773 GrpE protein signature 58 74 9.8E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 SUPERFAMILY SSF51064 134 190 2.88E-18 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 PANTHER PTHR21237 26 192 3.0E-62 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 Gene3D G3DSA:3.90.20.20 30 131 1.1E-30 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 Pfam PF01025 GrpE 22 189 3.1E-48 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 Gene3D G3DSA:2.30.22.10 133 191 1.0E-24 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 ProSitePatterns PS01071 grpE protein signature. 144 187 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LK04_RS03970 fb8c2b0fa00bac091a1fb1ee1bab7ef5 192 SUPERFAMILY SSF58014 36 133 1.44E-26 T 22-04-2016 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 PANTHER PTHR11699 648 1104 1.5E-173 T 22-04-2016 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 606 1108 4.8E-245 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 PIRSF PIRSF000197 70 1314 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 SUPERFAMILY SSF47598 3 45 3.33E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 Gene3D G3DSA:1.20.5.550 83 134 5.2E-26 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 Gene3D G3DSA:3.20.20.220 257 613 1.3E-120 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 SUPERFAMILY SSF81935 84 257 1.29E-65 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 Gene3D G3DSA:3.40.605.10 656 893 1.2E-67 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 906 917 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 SUPERFAMILY SSF53720 653 1106 9.95E-125 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 Pfam PF01619 Proline dehydrogenase 266 565 1.5E-97 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 Gene3D G3DSA:1.10.2060.10 139 256 1.1E-54 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 143 255 3.6E-46 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 878 885 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 SUPERFAMILY SSF51730 258 614 1.22E-122 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 Gene3D G3DSA:3.40.309.10 894 1086 5.1E-44 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 Pfam PF00171 Aldehyde dehydrogenase family 658 1101 5.1E-114 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS07095 178d4b58d452167f65c1334da0a59a70 1314 PANTHER PTHR11699:SF18 648 1104 1.5E-173 T 22-04-2016 LK04_RS00405 a50e9bde88070b1b98f3ca44456f9995 534 PANTHER PTHR33121 215 516 1.3E-101 T 22-04-2016 LK04_RS00405 a50e9bde88070b1b98f3ca44456f9995 534 Pfam PF12792 CSS motif domain associated with EAL 40 239 6.4E-41 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LK04_RS00405 a50e9bde88070b1b98f3ca44456f9995 534 Gene3D G3DSA:3.20.20.450 268 516 2.9E-74 T 22-04-2016 IPR001633 EAL domain LK04_RS00405 a50e9bde88070b1b98f3ca44456f9995 534 SMART SM00052 264 508 2.0E-80 T 22-04-2016 IPR001633 EAL domain LK04_RS00405 a50e9bde88070b1b98f3ca44456f9995 534 Pfam PF00563 EAL domain 271 503 1.2E-60 T 22-04-2016 IPR001633 EAL domain LK04_RS00405 a50e9bde88070b1b98f3ca44456f9995 534 PANTHER PTHR33121:SF1 215 516 1.3E-101 T 22-04-2016 LK04_RS00405 a50e9bde88070b1b98f3ca44456f9995 534 SUPERFAMILY SSF141868 270 516 4.97E-72 T 22-04-2016 IPR001633 EAL domain LK04_RS11720 74d24cc271e18323d90199b321b234e2 324 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 175 2.8E-22 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase LK04_RS11720 74d24cc271e18323d90199b321b234e2 324 PANTHER PTHR40031:SF1 2 324 1.5E-38 T 22-04-2016 LK04_RS11720 74d24cc271e18323d90199b321b234e2 324 PANTHER PTHR40031 2 324 1.5E-38 T 22-04-2016 LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 SUPERFAMILY SSF52794 381 470 4.08E-23 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 SUPERFAMILY SSF55804 500 638 7.72E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 PANTHER PTHR30181:SF2 1 614 0.0 T 22-04-2016 LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 Gene3D G3DSA:3.40.50.10370 380 476 7.9E-42 T 22-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 543 559 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 502 638 2.0E-33 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 PANTHER PTHR30181 1 614 0.0 T 22-04-2016 LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 Gene3D G3DSA:3.40.930.10 502 638 8.6E-43 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 347 1.4E-182 T 22-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 Pfam PF02378 Phosphotransferase system, EIIC 17 277 7.5E-19 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS18460 3bcfc845ba6e62bd6b920dec3dfe6375 641 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 383 458 1.3E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 Pfam PF00501 AMP-binding enzyme 233 619 3.0E-64 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 22-04-2016 IPR020845 AMP-binding, conserved site LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 SMART SM00563 30 140 4.7E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 Gene3D G3DSA:2.30.38.10 534 613 1.9E-12 T 22-04-2016 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 PANTHER PTHR24096 124 711 0.0 T 22-04-2016 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 Gene3D G3DSA:3.30.300.30 617 713 2.8E-9 T 22-04-2016 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 716 50.029 T 22-04-2016 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 PANTHER PTHR24096:SF177 124 711 0.0 T 22-04-2016 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 SUPERFAMILY SSF56801 230 713 1.26E-96 T 22-04-2016 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 Gene3D G3DSA:3.40.50.980 376 533 7.7E-39 T 22-04-2016 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 SUPERFAMILY SSF69593 8 171 1.18E-18 T 22-04-2016 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 Pfam PF01553 Acyltransferase 25 137 9.6E-15 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS03170 c8232b3add21e36612b594b335aecb52 716 Gene3D G3DSA:3.40.50.980 233 375 8.2E-19 T 22-04-2016 LK04_RS10635 e4c81fea6c57baa58f82822b1d9f3cb7 213 Gene3D G3DSA:1.20.5.590 1 33 4.8E-17 T 22-04-2016 LK04_RS10635 e4c81fea6c57baa58f82822b1d9f3cb7 213 Gene3D G3DSA:1.10.287.500 34 166 4.4E-57 T 22-04-2016 LK04_RS10635 e4c81fea6c57baa58f82822b1d9f3cb7 213 SUPERFAMILY SSF75708 10 212 1.96E-67 T 22-04-2016 LK04_RS10635 e4c81fea6c57baa58f82822b1d9f3cb7 213 PANTHER PTHR22617 15 213 1.3E-121 T 22-04-2016 LK04_RS10635 e4c81fea6c57baa58f82822b1d9f3cb7 213 Pfam PF04344 Chemotaxis phosphatase, CheZ 15 213 2.6E-78 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- LK04_RS10635 e4c81fea6c57baa58f82822b1d9f3cb7 213 PANTHER PTHR22617:SF32 15 213 1.3E-121 T 22-04-2016 LK04_RS10635 e4c81fea6c57baa58f82822b1d9f3cb7 213 PIRSF PIRSF002884 2 213 9.1E-88 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 SUPERFAMILY SSF53720 2 413 3.14E-112 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.072 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 PANTHER PTHR11063:SF8 1 416 8.8E-186 T 22-04-2016 LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 Gene3D G3DSA:3.40.309.10 223 374 6.4E-36 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 PIRSF PIRSF000151 1 417 6.5E-173 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 PANTHER PTHR11063 1 416 8.8E-186 T 22-04-2016 LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 Gene3D G3DSA:3.40.605.10 375 414 1.6E-105 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 Gene3D G3DSA:3.40.605.10 2 220 1.6E-105 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 2.7E-185 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LK04_RS14560 8909b924b74f8a22618695859ec4dedc 417 Pfam PF00171 Aldehyde dehydrogenase family 3 280 1.2E-11 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS11200 e64a825ae72121c28d4d9a60596814a5 399 PANTHER PTHR30489 1 399 3.5E-223 T 22-04-2016 LK04_RS11200 e64a825ae72121c28d4d9a60596814a5 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 399 4.0E-137 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 LK04_RS11200 e64a825ae72121c28d4d9a60596814a5 399 Pfam PF02687 FtsX-like permease family 270 392 2.1E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LK04_RS11200 e64a825ae72121c28d4d9a60596814a5 399 PANTHER PTHR30489:SF8 1 399 3.5E-223 T 22-04-2016 LK04_RS11200 e64a825ae72121c28d4d9a60596814a5 399 Pfam PF12704 MacB-like periplasmic core domain 27 208 9.2E-13 T 22-04-2016 IPR025857 MacB-like periplasmic core domain LK04_RS00830 d03b59de59fd4c15493d41ed956938bb 95 SUPERFAMILY SSF75169 1 95 1.35E-28 T 22-04-2016 IPR027396 DsrEFH-like LK04_RS00830 d03b59de59fd4c15493d41ed956938bb 95 PANTHER PTHR37526 1 95 1.7E-29 T 22-04-2016 LK04_RS00830 d03b59de59fd4c15493d41ed956938bb 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 27.334 T 22-04-2016 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 LK04_RS00830 d03b59de59fd4c15493d41ed956938bb 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 4.5E-29 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 LK04_RS00830 d03b59de59fd4c15493d41ed956938bb 95 Pfam PF04077 DsrH like protein 8 92 5.7E-29 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 LK04_RS00830 d03b59de59fd4c15493d41ed956938bb 95 Gene3D G3DSA:3.40.1260.10 1 94 8.5E-31 T 22-04-2016 IPR027396 DsrEFH-like LK04_RS02830 d56a5de8e841b183c1625a315219aa02 392 SUPERFAMILY SSF53474 55 188 3.78E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS02830 d56a5de8e841b183c1625a315219aa02 392 PANTHER PTHR23083 190 249 1.7E-12 T 22-04-2016 LK04_RS02830 d56a5de8e841b183c1625a315219aa02 392 PANTHER PTHR23083 268 376 1.7E-12 T 22-04-2016 LK04_RS02830 d56a5de8e841b183c1625a315219aa02 392 Gene3D G3DSA:1.25.40.10 217 376 8.0E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS02830 d56a5de8e841b183c1625a315219aa02 392 SUPERFAMILY SSF48452 258 375 1.19E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS02830 d56a5de8e841b183c1625a315219aa02 392 SMART SM00028 297 330 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS02830 d56a5de8e841b183c1625a315219aa02 392 SMART SM00028 263 296 38.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS02830 d56a5de8e841b183c1625a315219aa02 392 SMART SM00028 331 364 6.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS02830 d56a5de8e841b183c1625a315219aa02 392 Gene3D G3DSA:3.40.50.1820 44 163 4.2E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS01665 57e39b5ae3fecd2ab021f6055467c930 225 PANTHER PTHR30353:SF11 1 217 9.4E-156 T 22-04-2016 LK04_RS01665 57e39b5ae3fecd2ab021f6055467c930 225 Pfam PF09335 SNARE associated Golgi protein 48 172 5.4E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein LK04_RS01665 57e39b5ae3fecd2ab021f6055467c930 225 PANTHER PTHR30353 1 217 9.4E-156 T 22-04-2016 IPR032818 DedA family LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 5.2E-151 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 Gene3D G3DSA:3.50.30.20 4 147 5.7E-64 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PANTHER PTHR11405 189 380 1.7E-253 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PANTHER PTHR11405 3 173 1.7E-253 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 4.0E-53 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 SMART SM01097 3 133 1.6E-91 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 22-04-2016 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 SUPERFAMILY SSF52317 153 377 4.13E-65 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.784 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 Pfam PF00117 Glutamine amidotransferase class-I 197 372 2.6E-49 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 Gene3D G3DSA:3.40.50.880 154 377 1.6E-84 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS15585 3881681b64253841da19dc45a5f91a0b 382 SUPERFAMILY SSF52021 3 145 2.09E-57 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS06185 7c520e6213906987109d94aa4421fa28 111 Gene3D G3DSA:1.10.260.40 27 86 1.3E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06185 7c520e6213906987109d94aa4421fa28 111 SUPERFAMILY SSF47413 27 87 1.34E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06185 7c520e6213906987109d94aa4421fa28 111 Pfam PF01381 Helix-turn-helix 32 86 1.3E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 Pfam PF09179 TilS substrate binding domain 243 309 1.6E-18 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 SUPERFAMILY SSF52402 6 227 1.15E-62 T 22-04-2016 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 SUPERFAMILY SSF82829 228 313 1.83E-23 T 22-04-2016 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 PANTHER PTHR11807 9 431 1.7E-91 T 22-04-2016 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 SUPERFAMILY SSF56037 320 429 6.54E-27 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 358 403 3.5E-15 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 3 301 23.391 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 PANTHER PTHR11807:SF2 9 431 1.7E-91 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 Gene3D G3DSA:3.40.50.620 11 180 1.9E-10 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 16 197 9.8E-54 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 Pfam PF01171 PP-loop family 16 193 2.9E-59 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 Pfam PF11734 TilS substrate C-terminal domain 359 429 1.6E-24 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LK04_RS14890 961a1d5a766d748207117710a1e44a8a 433 SMART SM00977 358 429 3.7E-21 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Pfam PF03129 Anticodon binding domain 541 630 9.0E-23 T 22-04-2016 IPR004154 Anticodon-binding LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 SUPERFAMILY SSF55681 243 525 7.17E-98 T 22-04-2016 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.4E-246 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 SUPERFAMILY SSF55186 64 241 3.4E-63 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Gene3D G3DSA:3.30.930.10 242 529 1.6E-122 T 22-04-2016 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 1.5E-13 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.6E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.6E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.6E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.6E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.6E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 1.4E-51 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Gene3D G3DSA:3.40.50.800 532 640 1.6E-38 T 22-04-2016 IPR004154 Anticodon-binding LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Gene3D G3DSA:3.30.54.20 131 187 2.2E-20 T 22-04-2016 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Gene3D G3DSA:3.30.980.10 188 223 6.9E-40 T 22-04-2016 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Gene3D G3DSA:3.30.980.10 66 129 6.9E-40 T 22-04-2016 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 SUPERFAMILY SSF81271 3 61 2.06E-16 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.189 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Gene3D G3DSA:3.10.20.30 1 64 5.8E-24 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 SUPERFAMILY SSF52954 530 638 1.09E-32 T 22-04-2016 IPR004154 Anticodon-binding LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 SMART SM00863 170 219 9.9E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 PANTHER PTHR11451:SF31 1 635 0.0 T 22-04-2016 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 PANTHER PTHR11451 1 635 0.0 T 22-04-2016 LK04_RS10475 ab18248aeae73718851b1e02b5e32af7 642 Pfam PF02824 TGS domain 4 61 1.3E-11 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 LK04_RS09220 84ab6e7c2680f5795c565378fdb39b16 338 Pfam PF06812 ImpA, N-terminal, type VI secretion system 7 129 1.2E-37 T 22-04-2016 IPR010657 ImpA, N-terminal LK04_RS09220 84ab6e7c2680f5795c565378fdb39b16 338 PANTHER PTHR37951 1 335 3.5E-51 T 22-04-2016 LK04_RS09220 84ab6e7c2680f5795c565378fdb39b16 338 PANTHER PTHR37951:SF1 1 335 3.5E-51 T 22-04-2016 LK04_RS09220 84ab6e7c2680f5795c565378fdb39b16 338 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 1 330 5.8E-67 T 22-04-2016 IPR017740 Type VI secretion system-associated, ImpA LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 Gene3D G3DSA:1.10.530.10 104 263 7.3E-46 T 22-04-2016 LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 SMART SM00257 405 447 1.5E-10 T 22-04-2016 IPR018392 LysM domain LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 SMART SM00257 348 391 9.1E-15 T 22-04-2016 IPR018392 LysM domain LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 Pfam PF01464 Transglycosylase SLT domain 110 221 1.3E-27 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 Gene3D G3DSA:3.10.350.10 403 447 5.9E-16 T 22-04-2016 IPR018392 LysM domain LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 Gene3D G3DSA:3.10.350.10 348 390 1.2E-16 T 22-04-2016 IPR018392 LysM domain LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 PANTHER PTHR21666:SF206 13 447 1.6E-187 T 22-04-2016 LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 SUPERFAMILY SSF54106 348 390 7.06E-10 T 22-04-2016 IPR018392 LysM domain LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 Pfam PF01476 LysM domain 406 445 1.5E-8 T 22-04-2016 IPR018392 LysM domain LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 Pfam PF01476 LysM domain 349 390 6.9E-13 T 22-04-2016 IPR018392 LysM domain LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 PANTHER PTHR21666 13 447 1.6E-187 T 22-04-2016 LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 SUPERFAMILY SSF53955 106 257 1.45E-40 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 SUPERFAMILY SSF54106 403 447 2.35E-9 T 22-04-2016 IPR018392 LysM domain LK04_RS14785 23b0ac2fce8999212907836fb4a8bfde 456 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 128 156 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 Gene3D G3DSA:1.10.520.10 438 585 1.6E-52 T 22-04-2016 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 Gene3D G3DSA:1.10.520.10 60 258 2.0E-70 T 22-04-2016 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 Gene3D G3DSA:1.10.520.10 711 732 1.6E-52 T 22-04-2016 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 Hamap MF_01961 Catalase-peroxidase [katG]. 11 732 38.547 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 28 732 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PANTHER PTHR30555:SF0 1 732 0.0 T 22-04-2016 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 Pfam PF00141 Peroxidase 89 401 8.8E-48 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 Pfam PF00141 Peroxidase 409 707 9.9E-33 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PANTHER PTHR30555 1 732 0.0 T 22-04-2016 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 Gene3D G3DSA:1.10.420.10 586 707 1.9E-41 T 22-04-2016 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 SUPERFAMILY SSF48113 441 732 1.02E-102 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PRINTS PR00458 Haem peroxidase superfamily signature 265 280 7.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PRINTS PR00458 Haem peroxidase superfamily signature 163 180 7.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PRINTS PR00458 Haem peroxidase superfamily signature 181 193 7.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PRINTS PR00458 Haem peroxidase superfamily signature 103 117 7.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PRINTS PR00458 Haem peroxidase superfamily signature 324 339 7.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 SUPERFAMILY SSF48113 35 435 7.66E-138 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 Gene3D G3DSA:1.10.420.10 316 413 4.1E-44 T 22-04-2016 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 Gene3D G3DSA:1.10.420.10 259 280 4.1E-44 T 22-04-2016 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 65 78 2.2E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 273 296 2.2E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 80 105 2.2E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 39 61 2.2E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LK04_RS14670 76f326c46fbec81d6e3e43438748b215 732 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 485 511 2.2E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 SUPERFAMILY SSF50677 204 404 1.04E-50 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 Gene3D G3DSA:1.10.730.10 642 828 1.9E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 PANTHER PTHR11946 6 259 0.0 T 22-04-2016 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 PANTHER PTHR11946 282 938 0.0 T 22-04-2016 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 SUPERFAMILY SSF47323 653 930 3.18E-79 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 Gene3D G3DSA:3.90.740.10 206 390 2.1E-53 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 642 4.8E-233 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 Pfam PF08264 Anticodon-binding domain of tRNA 686 841 4.0E-28 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 Pfam PF06827 Zinc finger found in FPG and IleRS 899 927 1.2E-10 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 844 1.1E-295 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 SUPERFAMILY SSF52374 3 202 5.84E-136 T 22-04-2016 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 SUPERFAMILY SSF52374 404 649 5.84E-136 T 22-04-2016 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 1.6E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 527 540 1.6E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 562 571 1.6E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 402 417 1.6E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.6E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 Gene3D G3DSA:3.40.50.620 407 638 2.6E-134 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 Gene3D G3DSA:3.40.50.620 14 200 2.6E-134 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 PANTHER PTHR11946:SF11 6 259 0.0 T 22-04-2016 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 PANTHER PTHR11946:SF11 282 938 0.0 T 22-04-2016 LK04_RS15610 87791e47fe0002ef2510af53e81cf93c 939 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 930 21.419 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 LK04_RS06895 e18627b48cfd683c26fce9dfc4fbe652 262 PANTHER PTHR30065 2 261 9.2E-99 T 22-04-2016 LK04_RS06895 e18627b48cfd683c26fce9dfc4fbe652 262 PANTHER PTHR30065:SF1 2 261 9.2E-99 T 22-04-2016 LK04_RS06895 e18627b48cfd683c26fce9dfc4fbe652 262 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 254 1.4E-75 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 LK04_RS06895 e18627b48cfd683c26fce9dfc4fbe652 262 Pfam PF01311 Bacterial export proteins, family 1 14 246 3.0E-68 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LK04_RS06895 e18627b48cfd683c26fce9dfc4fbe652 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.14E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LK04_RS06895 e18627b48cfd683c26fce9dfc4fbe652 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.14E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LK04_RS06895 e18627b48cfd683c26fce9dfc4fbe652 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.14E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LK04_RS06895 e18627b48cfd683c26fce9dfc4fbe652 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.14E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LK04_RS06915 e351921c56a1cc1f5158c9c451cf1dd6 135 Gene3D G3DSA:2.30.330.10 48 134 2.8E-40 T 22-04-2016 LK04_RS06915 e351921c56a1cc1f5158c9c451cf1dd6 135 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 51 126 2.2E-34 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 LK04_RS06915 e351921c56a1cc1f5158c9c451cf1dd6 135 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 47 2.6E-19 T 22-04-2016 IPR031576 Flagellar motor switch protein FliN, N-terminal LK04_RS06915 e351921c56a1cc1f5158c9c451cf1dd6 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 100 115 1.3E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LK04_RS06915 e351921c56a1cc1f5158c9c451cf1dd6 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 54 70 1.3E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LK04_RS06915 e351921c56a1cc1f5158c9c451cf1dd6 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 71 87 1.3E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LK04_RS06915 e351921c56a1cc1f5158c9c451cf1dd6 135 PRINTS PR00956 Flagellar motor switch protein FliN signature 87 100 1.3E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LK04_RS06915 e351921c56a1cc1f5158c9c451cf1dd6 135 PANTHER PTHR22617 1 133 1.3E-36 T 22-04-2016 LK04_RS06915 e351921c56a1cc1f5158c9c451cf1dd6 135 SUPERFAMILY SSF101801 52 133 7.06E-28 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) LK04_RS06915 e351921c56a1cc1f5158c9c451cf1dd6 135 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 54 124 5.3E-27 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) LK04_RS12045 2e6f59795e50d6cc385a59c88a1bcee1 405 PANTHER PTHR30528 4 405 9.5E-117 T 22-04-2016 LK04_RS12045 2e6f59795e50d6cc385a59c88a1bcee1 405 Pfam PF06224 Winged helix DNA-binding domain 39 378 2.8E-81 T 22-04-2016 IPR009351 Protein of unknown function DUF1006 LK04_RS03175 3d157d43a87f2355a036636797b3eb68 396 Gene3D G3DSA:1.20.1250.20 14 187 4.2E-13 T 22-04-2016 LK04_RS03175 3d157d43a87f2355a036636797b3eb68 396 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 396 39.159 T 22-04-2016 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 LK04_RS03175 3d157d43a87f2355a036636797b3eb68 396 PANTHER PTHR23513 1 396 5.5E-185 T 22-04-2016 LK04_RS03175 3d157d43a87f2355a036636797b3eb68 396 SUPERFAMILY SSF103473 14 393 8.76E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS03175 3d157d43a87f2355a036636797b3eb68 396 Pfam PF07690 Major Facilitator Superfamily 20 357 1.7E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS03175 3d157d43a87f2355a036636797b3eb68 396 PANTHER PTHR23513:SF8 1 396 5.5E-185 T 22-04-2016 LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 Gene3D G3DSA:3.40.50.720 3 161 4.0E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 267 3.9E-89 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 267 26.981 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 6.6E-22 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 Gene3D G3DSA:1.10.3730.10 163 266 1.7E-43 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 6.2E-39 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 PIRSF PIRSF000193 3 270 2.7E-91 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 SUPERFAMILY SSF51735 4 161 4.58E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 PANTHER PTHR11645 1 270 4.9E-120 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 PANTHER PTHR11645:SF0 1 270 4.9E-120 T 22-04-2016 LK04_RS14290 e91556e0d8006eca8531319e77537d94 270 SUPERFAMILY SSF48179 162 269 2.72E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS02140 f01340ce0e1c7f47af13e6d8f98c31ae 170 Gene3D G3DSA:2.60.40.1090 59 169 4.3E-4 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LK04_RS02140 f01340ce0e1c7f47af13e6d8f98c31ae 170 Pfam PF05229 Spore Coat Protein U domain 27 167 2.9E-29 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS02140 f01340ce0e1c7f47af13e6d8f98c31ae 170 SMART SM00972 111 167 2.6E-14 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS02140 f01340ce0e1c7f47af13e6d8f98c31ae 170 PANTHER PTHR37089 1 170 4.0E-19 T 22-04-2016 LK04_RS02140 f01340ce0e1c7f47af13e6d8f98c31ae 170 SUPERFAMILY SSF49401 39 170 9.94E-6 T 22-04-2016 IPR008966 Adhesion domain LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 SUPERFAMILY SSF48179 284 487 1.33E-63 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 PRINTS PR00084 Mannitol dehydrogenase signature 219 232 3.7E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 PRINTS PR00084 Mannitol dehydrogenase signature 249 264 3.7E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 PRINTS PR00084 Mannitol dehydrogenase signature 26 36 3.7E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 PRINTS PR00084 Mannitol dehydrogenase signature 180 193 3.7E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 SUPERFAMILY SSF51735 9 282 1.22E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 25 189 3.4E-48 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 218 465 2.7E-90 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 Gene3D G3DSA:3.40.50.720 6 282 3.1E-108 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 PANTHER PTHR30562:SF6 10 486 3.2E-222 T 22-04-2016 LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 Gene3D G3DSA:1.10.1040.10 284 487 1.7E-72 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 PANTHER PTHR30562 10 486 3.2E-222 T 22-04-2016 LK04_RS09380 b7518ef27c9a373a1c3549a6e8303a8f 493 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 219 231 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 SUPERFAMILY SSF52440 1 110 7.91E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 SUPERFAMILY SSF51246 330 443 6.28E-37 T 22-04-2016 IPR011054 Rudiment single hybrid motif LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Gene3D G3DSA:2.40.100.10 924 1064 3.3E-43 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Gene3D G3DSA:2.40.100.10 632 765 3.1E-35 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 449 775 5.5E-100 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1161 1178 - T 22-04-2016 IPR001882 Biotin-binding site LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 SUPERFAMILY SSF51230 1128 1205 4.97E-22 T 22-04-2016 IPR011053 Single hybrid motif LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Gene3D G3DSA:3.40.50.20 1 129 1.6E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 SUPERFAMILY SSF56059 83 352 4.24E-67 T 22-04-2016 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 PANTHER PTHR18866 1105 1205 0.0 T 22-04-2016 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 PANTHER PTHR18866 1 538 0.0 T 22-04-2016 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Pfam PF02626 Allophanate hydrolase subunit 2 472 751 2.4E-89 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 321 2.4E-62 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1205 0.0 T 22-04-2016 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703|UniPathway: UPA00258|UniPathway: UPA00258 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 SMART SM00796 808 1041 1.3E-101 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Gene3D G3DSA:3.30.1490.20 130 201 1.4E-21 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 SUPERFAMILY SSF160467 810 902 1.96E-19 T 22-04-2016 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Gene3D G3DSA:2.40.50.100 1134 1205 6.2E-25 T 22-04-2016 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Gene3D G3DSA:3.30.470.20 202 441 1.4E-90 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Pfam PF02682 Allophanate hydrolase subunit 1 810 1026 3.5E-45 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 SUPERFAMILY SSF50891 925 1057 1.37E-25 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.7E-42 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Pfam PF00364 Biotin-requiring enzyme 1144 1202 1.3E-17 T 22-04-2016 IPR000089 Biotin/lipoyl attachment LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 SMART SM00797 471 768 1.2E-169 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 SUPERFAMILY SSF50891 632 758 1.1E-33 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 SMART SM00878 336 440 8.9E-56 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 PANTHER PTHR18866:SF91 1105 1205 0.0 T 22-04-2016 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 PANTHER PTHR18866:SF91 1 538 0.0 T 22-04-2016 LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Gene3D G3DSA:3.30.1360.40 810 890 9.5E-26 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LK04_RS15875 b2c81eb2c405b6a6ce4dcaffd4288be0 1205 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 4.5E-36 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal LK04_RS11840 69684a89af13780b9074edb7c796e2ff 684 Gene3D G3DSA:3.40.50.300 587 673 2.9E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11840 69684a89af13780b9074edb7c796e2ff 684 Pfam PF13361 UvrD-like helicase C-terminal domain 566 660 1.4E-12 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LK04_RS11840 69684a89af13780b9074edb7c796e2ff 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 5.3E-65 T 22-04-2016 IPR022161 DNA helicase IV, N-terminal domain LK04_RS11840 69684a89af13780b9074edb7c796e2ff 684 Gene3D G3DSA:3.40.50.300 196 329 5.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11840 69684a89af13780b9074edb7c796e2ff 684 Gene3D G3DSA:3.40.50.300 395 492 5.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11840 69684a89af13780b9074edb7c796e2ff 684 SUPERFAMILY SSF52540 195 337 7.19E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11840 69684a89af13780b9074edb7c796e2ff 684 SUPERFAMILY SSF52540 385 674 7.19E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11840 69684a89af13780b9074edb7c796e2ff 684 PANTHER PTHR11070 99 677 4.4E-295 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LK04_RS11840 69684a89af13780b9074edb7c796e2ff 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 488 3.3E-42 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LK04_RS11840 69684a89af13780b9074edb7c796e2ff 684 PANTHER PTHR11070:SF26 99 677 4.4E-295 T 22-04-2016 LK04_RS17520 7f5ff10b30d1ef46701ab0c2152687d0 199 PIRSF PIRSF004553 13 193 1.5E-60 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS17520 7f5ff10b30d1ef46701ab0c2152687d0 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 11 191 2.4E-69 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS17520 7f5ff10b30d1ef46701ab0c2152687d0 199 Gene3D G3DSA:3.40.50.150 7 195 2.3E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS17520 7f5ff10b30d1ef46701ab0c2152687d0 199 SUPERFAMILY SSF53335 13 191 4.64E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS17520 7f5ff10b30d1ef46701ab0c2152687d0 199 Pfam PF03602 Conserved hypothetical protein 95 14 190 4.2E-65 T 22-04-2016 LK04_RS17520 7f5ff10b30d1ef46701ab0c2152687d0 199 PANTHER PTHR18895 13 194 6.8E-55 T 22-04-2016 LK04_RS17520 7f5ff10b30d1ef46701ab0c2152687d0 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 126 132 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS17520 7f5ff10b30d1ef46701ab0c2152687d0 199 PANTHER PTHR18895:SF60 13 194 6.8E-55 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 SUPERFAMILY SSF82866 296 497 2.88E-48 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PANTHER PTHR32063:SF13 1 1034 0.0 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 Gene3D G3DSA:3.30.2090.10 720 809 2.8E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 Gene3D G3DSA:3.30.2090.10 181 274 7.0E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 SUPERFAMILY SSF82693 274 330 2.44E-21 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 SUPERFAMILY SSF82693 135 182 2.44E-21 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 SUPERFAMILY SSF82714 182 272 1.26E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 SUPERFAMILY SSF82714 721 807 3.4E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 Gene3D G3DSA:1.10.3850.10 814 1025 7.6E-57 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 Gene3D G3DSA:1.10.3850.10 281 498 4.9E-58 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 Gene3D G3DSA:3.30.70.1430 38 139 1.8E-31 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 SUPERFAMILY SSF82693 564 668 1.28E-27 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 SUPERFAMILY SSF82866 830 1024 1.57E-47 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 SUPERFAMILY SSF82693 671 720 3.92E-24 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 SUPERFAMILY SSF82693 807 855 3.92E-24 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PANTHER PTHR32063 1 1034 0.0 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 SUPERFAMILY SSF82693 38 131 2.2E-25 T 22-04-2016 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 6.6E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.6E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 6.6E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 6.6E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.6E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 6.6E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 6.6E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 6.6E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 6.6E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 LK04_RS03140 30e691fe1d94b5567e51fd8bece9e842 1044 Gene3D G3DSA:3.30.70.1430 566 669 3.3E-31 T 22-04-2016 LK04_RS08440 ea907c5fc4b83bb327e8f50fd9680122 237 Gene3D G3DSA:3.40.630.10 18 230 5.8E-41 T 22-04-2016 LK04_RS08440 ea907c5fc4b83bb327e8f50fd9680122 237 SUPERFAMILY SSF53187 134 232 3.46E-33 T 22-04-2016 LK04_RS08440 ea907c5fc4b83bb327e8f50fd9680122 237 SUPERFAMILY SSF53187 18 107 3.46E-33 T 22-04-2016 LK04_RS08440 ea907c5fc4b83bb327e8f50fd9680122 237 Pfam PF00246 Zinc carboxypeptidase 43 169 1.3E-14 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 LK04_RS12535 67d9f673f512d839ec7f4d1ac5557fef 405 Gene3D G3DSA:3.20.20.140 77 362 1.8E-44 T 22-04-2016 LK04_RS12535 67d9f673f512d839ec7f4d1ac5557fef 405 SUPERFAMILY SSF51556 66 366 1.2E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS12535 67d9f673f512d839ec7f4d1ac5557fef 405 SUPERFAMILY SSF51338 367 403 1.66E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS12535 67d9f673f512d839ec7f4d1ac5557fef 405 SUPERFAMILY SSF51338 7 66 1.66E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS12535 67d9f673f512d839ec7f4d1ac5557fef 405 Pfam PF01979 Amidohydrolase family 63 378 6.1E-22 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LK04_RS12535 67d9f673f512d839ec7f4d1ac5557fef 405 Gene3D G3DSA:2.30.40.10 24 76 6.6E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS12535 67d9f673f512d839ec7f4d1ac5557fef 405 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 405 41.87 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 LK04_RS12535 67d9f673f512d839ec7f4d1ac5557fef 405 TIGRFAM TIGR01224 hutI: imidazolonepropionase 28 403 1.3E-146 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 LK04_RS12535 67d9f673f512d839ec7f4d1ac5557fef 405 PANTHER PTHR22642 1 403 2.0E-143 T 22-04-2016 LK04_RS12535 67d9f673f512d839ec7f4d1ac5557fef 405 PANTHER PTHR22642:SF1 1 403 2.0E-143 T 22-04-2016 LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.3E-65 T 22-04-2016 IPR000150 Cof protein GO:0016787 LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 Gene3D G3DSA:3.30.1240.10 87 182 3.9E-38 T 22-04-2016 LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 PANTHER PTHR10000:SF29 1 269 3.8E-129 T 22-04-2016 LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 2.8E-67 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 PANTHER PTHR10000 1 269 3.8E-129 T 22-04-2016 LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 Gene3D G3DSA:3.40.50.1000 1 76 3.9E-57 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 Gene3D G3DSA:3.40.50.1000 183 269 3.9E-57 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 SUPERFAMILY SSF56784 1 268 6.88E-74 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 5.5E-29 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LK04_RS18800 8ad0f53c59ed6fc02c05fa13af970035 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 22-04-2016 LK04_RS10190 526e81d573a1e801b1c62c3d04adf080 218 SUPERFAMILY SSF50475 21 218 9.54E-68 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS10190 526e81d573a1e801b1c62c3d04adf080 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 5 218 2.0E-94 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS10190 526e81d573a1e801b1c62c3d04adf080 218 Gene3D G3DSA:2.30.110.10 22 218 5.5E-81 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS10190 526e81d573a1e801b1c62c3d04adf080 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS10190 526e81d573a1e801b1c62c3d04adf080 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 123 1.8E-22 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS10190 526e81d573a1e801b1c62c3d04adf080 218 PANTHER PTHR10851 1 218 5.5E-110 T 22-04-2016 LK04_RS10190 526e81d573a1e801b1c62c3d04adf080 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.455 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS10190 526e81d573a1e801b1c62c3d04adf080 218 PIRSF PIRSF000190 1 218 3.4E-81 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS10190 526e81d573a1e801b1c62c3d04adf080 218 PANTHER PTHR10851:SF0 1 218 5.5E-110 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS10190 526e81d573a1e801b1c62c3d04adf080 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 7.4E-19 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS03030 184d16baf4df57342ad6a5dfee4dec8d 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 89 1.1E-24 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LK04_RS03030 184d16baf4df57342ad6a5dfee4dec8d 297 PANTHER PTHR30349:SF5 5 297 4.2E-124 T 22-04-2016 LK04_RS03030 184d16baf4df57342ad6a5dfee4dec8d 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 297 31.766 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD LK04_RS03030 184d16baf4df57342ad6a5dfee4dec8d 297 SUPERFAMILY SSF56349 5 289 4.41E-59 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LK04_RS03030 184d16baf4df57342ad6a5dfee4dec8d 297 Pfam PF00589 Phage integrase family 112 283 3.6E-56 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LK04_RS03030 184d16baf4df57342ad6a5dfee4dec8d 297 Gene3D G3DSA:1.10.150.130 5 98 1.7E-29 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal LK04_RS03030 184d16baf4df57342ad6a5dfee4dec8d 297 PANTHER PTHR30349 5 297 4.2E-124 T 22-04-2016 LK04_RS03030 184d16baf4df57342ad6a5dfee4dec8d 297 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 3 297 64.526 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 LK04_RS03030 184d16baf4df57342ad6a5dfee4dec8d 297 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 8 297 2.6E-119 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 LK04_RS03030 184d16baf4df57342ad6a5dfee4dec8d 297 Gene3D G3DSA:1.10.443.10 112 288 1.3E-58 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LK04_RS17395 e7d0c155b81a671f1c64e1560140ccba 330 Pfam PF08402 TOBE domain 257 320 1.5E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LK04_RS17395 e7d0c155b81a671f1c64e1560140ccba 330 PANTHER PTHR24220:SF150 5 243 2.2E-120 T 22-04-2016 LK04_RS17395 e7d0c155b81a671f1c64e1560140ccba 330 SUPERFAMILY SSF52540 4 241 5.05E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17395 e7d0c155b81a671f1c64e1560140ccba 330 Pfam PF00005 ABC transporter 20 161 2.2E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS17395 e7d0c155b81a671f1c64e1560140ccba 330 PANTHER PTHR24220 5 243 2.2E-120 T 22-04-2016 LK04_RS17395 e7d0c155b81a671f1c64e1560140ccba 330 SUPERFAMILY SSF50331 256 323 2.78E-6 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LK04_RS17395 e7d0c155b81a671f1c64e1560140ccba 330 Gene3D G3DSA:3.40.50.300 4 233 5.4E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17395 e7d0c155b81a671f1c64e1560140ccba 330 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS17395 e7d0c155b81a671f1c64e1560140ccba 330 SMART SM00382 28 211 1.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS19365 048563e28675cd436e49aed7eb57df5a 198 SUPERFAMILY SSF46689 10 73 1.25E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS19365 048563e28675cd436e49aed7eb57df5a 198 PANTHER PTHR30055:SF58 1 193 3.8E-116 T 22-04-2016 LK04_RS19365 048563e28675cd436e49aed7eb57df5a 198 Gene3D G3DSA:1.10.357.10 7 179 1.6E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS19365 048563e28675cd436e49aed7eb57df5a 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.787 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 LK04_RS19365 048563e28675cd436e49aed7eb57df5a 198 PANTHER PTHR30055 1 193 3.8E-116 T 22-04-2016 LK04_RS19365 048563e28675cd436e49aed7eb57df5a 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LK04_RS19365 048563e28675cd436e49aed7eb57df5a 198 SUPERFAMILY SSF48498 85 192 2.82E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LK04_RS19365 048563e28675cd436e49aed7eb57df5a 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 1.5E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS00285 4233a20402fc8e8736265254cc4851a0 537 SUPERFAMILY SSF53067 274 531 2.29E-47 T 22-04-2016 LK04_RS00285 4233a20402fc8e8736265254cc4851a0 537 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 264 1.1E-35 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LK04_RS00285 4233a20402fc8e8736265254cc4851a0 537 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 7 533 3.4E-214 T 22-04-2016 IPR006003 Carbohydrate kinase, FGGY-related GO:0005975|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS00285 4233a20402fc8e8736265254cc4851a0 537 PANTHER PTHR10196 1 535 1.5E-191 T 22-04-2016 LK04_RS00285 4233a20402fc8e8736265254cc4851a0 537 PANTHER PTHR10196:SF71 1 535 1.5E-191 T 22-04-2016 LK04_RS00285 4233a20402fc8e8736265254cc4851a0 537 SUPERFAMILY SSF53067 5 265 1.01E-61 T 22-04-2016 LK04_RS00285 4233a20402fc8e8736265254cc4851a0 537 PIRSF PIRSF000538 4 537 7.9E-75 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS00285 4233a20402fc8e8736265254cc4851a0 537 Gene3D G3DSA:3.30.420.40 275 533 1.3E-54 T 22-04-2016 LK04_RS00285 4233a20402fc8e8736265254cc4851a0 537 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 277 484 1.0E-40 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LK04_RS00285 4233a20402fc8e8736265254cc4851a0 537 Gene3D G3DSA:3.30.420.40 2 265 6.4E-73 T 22-04-2016 LK04_RS19635 21f5cf742c770d9a1ec6ac109df87ccc 386 PIRSF PIRSF001434 1 383 1.2E-133 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS19635 21f5cf742c770d9a1ec6ac109df87ccc 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 381 1.3E-204 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 LK04_RS19635 21f5cf742c770d9a1ec6ac109df87ccc 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS19635 21f5cf742c770d9a1ec6ac109df87ccc 386 Gene3D G3DSA:3.40.640.10 5 246 1.9E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS19635 21f5cf742c770d9a1ec6ac109df87ccc 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 9.0E-140 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS19635 21f5cf742c770d9a1ec6ac109df87ccc 386 PANTHER PTHR11808 1 385 7.5E-181 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS19635 21f5cf742c770d9a1ec6ac109df87ccc 386 Gene3D G3DSA:3.90.1150.10 248 382 4.0E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS19635 21f5cf742c770d9a1ec6ac109df87ccc 386 SUPERFAMILY SSF53383 5 381 7.29E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PANTHER PTHR24322 14 132 1.2E-73 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PANTHER PTHR24322 148 180 1.2E-73 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 Gene3D G3DSA:3.40.50.720 4 250 5.8E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 181 0.0023 T 22-04-2016 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 202 221 6.7E-59 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 78 95 6.7E-59 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 16 33 6.7E-59 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 98 118 6.7E-59 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 163 186 6.7E-59 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 228 247 6.7E-59 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 12 251 5.1E-105 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.6E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.6E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.6E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PANTHER PTHR24322:SF336 14 132 1.2E-73 T 22-04-2016 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 PANTHER PTHR24322:SF336 148 180 1.2E-73 T 22-04-2016 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 249 3.9E-49 T 22-04-2016 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS16530 a55fdcb06d0b30b12d1b2a9cd32318dc 252 SUPERFAMILY SSF51735 4 250 4.16E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PANTHER PTHR24423:SF382 3 12 5.9E-224 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 Pfam PF00072 Response regulator receiver domain 828 937 1.2E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PANTHER PTHR24423 825 949 5.9E-224 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 942 26.311 T 22-04-2016 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 Gene3D G3DSA:3.30.565.10 523 694 4.0E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 Gene3D G3DSA:1.10.287.130 475 522 1.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 SUPERFAMILY SSF47384 454 537 4.9E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 535 1.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PANTHER PTHR24423 3 12 5.9E-224 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 SUPERFAMILY SSF52172 704 811 3.15E-32 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PANTHER PTHR24423:SF382 357 697 5.9E-224 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PANTHER PTHR24423:SF382 64 83 5.9E-224 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PANTHER PTHR24423 357 697 5.9E-224 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 Gene3D G3DSA:3.40.50.2300 825 946 1.7E-38 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PANTHER PTHR24423 64 83 5.9E-224 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PANTHER PTHR24423:SF382 728 787 5.9E-224 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 691 2.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 Gene3D G3DSA:3.30.450.20 430 474 2.2E-6 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 SMART SM00388 471 536 2.2E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PANTHER PTHR24423:SF382 825 949 5.9E-224 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 SUPERFAMILY SSF55874 525 694 2.1E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 SMART SM00448 826 937 4.7E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 SUPERFAMILY SSF52172 825 948 2.85E-38 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 711 800 1.5E-32 T 22-04-2016 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PANTHER PTHR24423 728 787 5.9E-224 T 22-04-2016 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 2.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 2.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 2.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 2.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS05610 42ba9d2bbcee793ef1ab69ac3e1da459 950 SMART SM00387 583 694 1.2E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS15895 a37c9c03a1731a34cf2d1b31368e3637 358 PANTHER PTHR30482 116 357 1.7E-187 T 22-04-2016 LK04_RS15895 a37c9c03a1731a34cf2d1b31368e3637 358 PANTHER PTHR30482 1 94 1.7E-187 T 22-04-2016 LK04_RS15895 a37c9c03a1731a34cf2d1b31368e3637 358 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 3.0E-130 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC LK04_RS15895 a37c9c03a1731a34cf2d1b31368e3637 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 340 2.6E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS15895 a37c9c03a1731a34cf2d1b31368e3637 358 PANTHER PTHR30482:SF4 116 357 1.7E-187 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC LK04_RS15895 a37c9c03a1731a34cf2d1b31368e3637 358 PANTHER PTHR30482:SF4 1 94 1.7E-187 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 SUPERFAMILY SSF52540 285 381 9.74E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 PANTHER PTHR10887:SF351 155 328 2.5E-84 T 22-04-2016 LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 10 609 3.5E-191 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 Gene3D G3DSA:3.40.50.300 372 450 2.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 Gene3D G3DSA:3.40.50.300 530 587 2.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 PANTHER PTHR10887 155 328 2.5E-84 T 22-04-2016 LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 SUPERFAMILY SSF52540 437 609 9.74E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 Gene3D G3DSA:3.40.50.300 138 321 1.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 Gene3D G3DSA:3.40.50.300 353 371 1.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 SUPERFAMILY SSF52540 8 363 2.53E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 609 53.996 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 Pfam PF13538 UvrD-like helicase C-terminal domain 538 584 1.2E-15 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain LK04_RS03255 558ac2e687e4427ca91f98fc6a0b14d4 612 Pfam PF13604 AAA domain 158 322 7.7E-31 T 22-04-2016 LK04_RS15535 900031d0a91a11584d1746088743c7d8 270 Gene3D G3DSA:1.10.3680.10 22 206 1.6E-27 T 22-04-2016 IPR029024 TerB-like LK04_RS15535 900031d0a91a11584d1746088743c7d8 270 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 270 40.968 T 22-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 LK04_RS15535 900031d0a91a11584d1746088743c7d8 270 SUPERFAMILY SSF46565 132 266 4.71E-30 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15535 900031d0a91a11584d1746088743c7d8 270 Gene3D G3DSA:1.10.287.110 207 266 2.4E-13 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15535 900031d0a91a11584d1746088743c7d8 270 Pfam PF00226 DnaJ domain 207 266 5.2E-10 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15535 900031d0a91a11584d1746088743c7d8 270 PRINTS PR00625 DnaJ domain signature 206 224 8.2E-7 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15535 900031d0a91a11584d1746088743c7d8 270 PRINTS PR00625 DnaJ domain signature 224 239 8.2E-7 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15535 900031d0a91a11584d1746088743c7d8 270 PRINTS PR00625 DnaJ domain signature 248 268 8.2E-7 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15535 900031d0a91a11584d1746088743c7d8 270 SMART SM00271 203 268 2.5E-16 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15535 900031d0a91a11584d1746088743c7d8 270 Pfam PF05099 Tellurite resistance protein TerB 46 171 5.1E-11 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal LK04_RS00180 71f5c24125a30a4f2e1611fb4d8c2d61 102 SUPERFAMILY SSF143011 6 96 9.55E-15 T 22-04-2016 LK04_RS00180 71f5c24125a30a4f2e1611fb4d8c2d61 102 PANTHER PTHR40266 1 100 1.9E-43 T 22-04-2016 LK04_RS00180 71f5c24125a30a4f2e1611fb4d8c2d61 102 PANTHER PTHR40266:SF1 1 100 1.9E-43 T 22-04-2016 LK04_RS00180 71f5c24125a30a4f2e1611fb4d8c2d61 102 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 6 96 1.0E-30 T 22-04-2016 IPR007711 Toxin HigB-1 LK04_RS01540 7c4785d9f560a4caf57c047d9bacee3d 118 Pfam PF14272 Glycine-rich SFCGS 2 115 1.5E-60 T 22-04-2016 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 LK04_RS01540 7c4785d9f560a4caf57c047d9bacee3d 118 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 2 116 5.5E-67 T 22-04-2016 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 Gene3D G3DSA:3.40.50.970 348 537 4.3E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 PANTHER PTHR18968 1 548 1.4E-224 T 22-04-2016 LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 SUPERFAMILY SSF52518 353 544 1.2E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 Gene3D G3DSA:3.40.50.1220 187 336 1.0E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 322 2.5E-16 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 Gene3D G3DSA:3.40.50.970 3 181 3.3E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 SUPERFAMILY SSF52518 4 178 5.15E-40 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 PANTHER PTHR18968:SF4 1 548 1.4E-224 T 22-04-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 PIRSF PIRSF036565 1 549 2.5E-205 T 22-04-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 SUPERFAMILY SSF52467 168 334 5.65E-27 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 525 1.3E-17 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 176 2.1E-31 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LK04_RS04795 7c9fdfe1d7acfa418562116344df7fc5 551 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 415 434 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LK04_RS12770 6d662ea737c083929e0734b7842acd33 536 PANTHER PTHR11101 53 533 2.7E-251 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 LK04_RS12770 6d662ea737c083929e0734b7842acd33 536 PANTHER PTHR11101:SF61 53 533 2.7E-251 T 22-04-2016 LK04_RS12770 6d662ea737c083929e0734b7842acd33 536 Pfam PF01384 Phosphate transporter family 81 526 3.4E-82 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 LK04_RS09565 4bc8d2660f7c758697ea1842279695e1 341 PANTHER PTHR10443 6 340 7.8E-88 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 LK04_RS09565 4bc8d2660f7c758697ea1842279695e1 341 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 3 337 6.5E-96 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 LK04_RS09565 4bc8d2660f7c758697ea1842279695e1 341 SUPERFAMILY SSF51556 4 339 6.8E-88 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS09565 4bc8d2660f7c758697ea1842279695e1 341 Gene3D G3DSA:3.20.20.140 4 340 1.7E-103 T 22-04-2016 LK04_RS10330 5793237f0c908d92914e02c195353071 470 Gene3D G3DSA:3.40.1380.20 326 469 2.3E-41 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 SUPERFAMILY SSF51621 167 338 9.07E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS10330 5793237f0c908d92914e02c195353071 470 SUPERFAMILY SSF51621 1 75 9.07E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS10330 5793237f0c908d92914e02c195353071 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 Gene3D G3DSA:3.20.20.60 169 325 1.1E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS10330 5793237f0c908d92914e02c195353071 470 Gene3D G3DSA:3.20.20.60 2 72 1.1E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS10330 5793237f0c908d92914e02c195353071 470 SUPERFAMILY SSF52935 323 469 5.23E-33 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 7.4E-26 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 Gene3D G3DSA:2.40.33.10 73 168 1.1E-33 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 PANTHER PTHR11817 1 464 1.0E-253 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 4.6E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 4.6E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 4.6E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 4.6E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 4.6E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 4.6E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 4.6E-78 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.3E-187 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS10330 5793237f0c908d92914e02c195353071 470 SUPERFAMILY SSF50800 70 167 3.31E-30 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain LK04_RS10330 5793237f0c908d92914e02c195353071 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.1E-153 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.4E-12 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 SUPERFAMILY SSF55681 96 464 7.76E-97 T 22-04-2016 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 Gene3D G3DSA:2.40.50.140 16 103 1.5E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 PANTHER PTHR22594 6 180 8.7E-252 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 PANTHER PTHR22594 199 465 8.7E-252 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 3.8E-209 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 2.7E-82 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 Gene3D G3DSA:3.30.930.10 108 463 1.7E-112 T 22-04-2016 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 PANTHER PTHR22594:SF6 6 180 8.7E-252 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 PANTHER PTHR22594:SF6 199 465 8.7E-252 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.272 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 LK04_RS11975 cef1b521cad99f9efc9f2af5dacc489d 466 SUPERFAMILY SSF50249 16 102 1.67E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS02180 3a68e605797a0f0841ebaf0792a27ef0 309 PANTHER PTHR34595 1 308 7.3E-80 T 22-04-2016 LK04_RS02180 3a68e605797a0f0841ebaf0792a27ef0 309 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 6.3E-82 T 22-04-2016 IPR007296 Domain of unknown function DUF403 LK04_RS16395 5aa76b61225eb74047c8deaf937185ce 135 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 118 2.0E-42 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LK04_RS16395 5aa76b61225eb74047c8deaf937185ce 135 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 23.143 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LK04_RS16395 5aa76b61225eb74047c8deaf937185ce 135 Gene3D G3DSA:3.30.300.20 1 107 3.1E-38 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LK04_RS16395 5aa76b61225eb74047c8deaf937185ce 135 Pfam PF02033 Ribosome-binding factor A 7 112 1.5E-31 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LK04_RS16395 5aa76b61225eb74047c8deaf937185ce 135 PANTHER PTHR33515 1 135 5.4E-52 T 22-04-2016 LK04_RS16395 5aa76b61225eb74047c8deaf937185ce 135 SUPERFAMILY SSF89919 2 107 1.15E-35 T 22-04-2016 IPR023799 Ribosome-binding factor A domain LK04_RS16395 5aa76b61225eb74047c8deaf937185ce 135 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 3.0E-42 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LK04_RS16395 5aa76b61225eb74047c8deaf937185ce 135 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 LK04_RS14415 2ef02ff3553340c9ed0523b5eda69787 455 PANTHER PTHR32027 49 449 2.3E-158 T 22-04-2016 LK04_RS14415 2ef02ff3553340c9ed0523b5eda69787 455 SUPERFAMILY SSF51556 117 403 9.68E-63 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS14415 2ef02ff3553340c9ed0523b5eda69787 455 SUPERFAMILY SSF51338 80 123 5.55E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS14415 2ef02ff3553340c9ed0523b5eda69787 455 Pfam PF07969 Amidohydrolase family 183 453 2.5E-8 T 22-04-2016 IPR013108 Amidohydrolase 3 LK04_RS14415 2ef02ff3553340c9ed0523b5eda69787 455 Gene3D G3DSA:3.20.20.140 124 403 6.4E-86 T 22-04-2016 LK04_RS14415 2ef02ff3553340c9ed0523b5eda69787 455 Gene3D G3DSA:2.30.40.10 75 123 2.5E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS14415 2ef02ff3553340c9ed0523b5eda69787 455 PANTHER PTHR32027:SF9 49 449 2.3E-158 T 22-04-2016 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 Gene3D G3DSA:3.40.1380.20 332 480 2.8E-38 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 Gene3D G3DSA:3.20.20.60 172 331 4.4E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 Gene3D G3DSA:3.20.20.60 6 76 4.4E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 7.0E-172 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 SUPERFAMILY SSF52935 329 479 2.62E-38 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 2.8E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 SUPERFAMILY SSF50800 74 168 5.41E-25 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 PANTHER PTHR11817 1 479 0.0 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.0E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.0E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.0E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.0E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.0E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.0E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.0E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 PANTHER PTHR11817:SF17 1 479 0.0 T 22-04-2016 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 1.4E-129 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 SUPERFAMILY SSF51621 171 344 2.13E-86 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 SUPERFAMILY SSF51621 4 79 2.13E-86 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS07455 526cbb22e4a761e71905db7c6611b9d6 480 Gene3D G3DSA:2.40.33.10 77 170 2.3E-28 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 2.7E-27 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 2.7E-27 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 2.7E-27 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 2.7E-27 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 2.7E-27 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 3.1E-25 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 1.3E-102 T 22-04-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 473 59.848 T 22-04-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 PANTHER PTHR22807:SF38 7 367 3.2E-208 T 22-04-2016 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 PANTHER PTHR22807 7 367 3.2E-208 T 22-04-2016 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 Pfam PF01189 16S rRNA methyltransferase RsmB/F 116 307 1.6E-45 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 Gene3D G3DSA:3.40.50.150 100 308 2.0E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 468 1.4E-11 T 22-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS07730 b114a4eb79a3aef3b16f78273004ecbc 474 SUPERFAMILY SSF53335 4 308 6.37E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS06740 2d7aaa381ebc7c7f7186ff99e0b183df 248 PANTHER PTHR26402:SF292 3 237 2.8E-71 T 22-04-2016 LK04_RS06740 2d7aaa381ebc7c7f7186ff99e0b183df 248 Pfam PF00072 Response regulator receiver domain 5 114 4.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS06740 2d7aaa381ebc7c7f7186ff99e0b183df 248 Gene3D G3DSA:3.40.50.2300 2 129 7.8E-35 T 22-04-2016 LK04_RS06740 2d7aaa381ebc7c7f7186ff99e0b183df 248 Gene3D G3DSA:1.10.10.10 136 234 6.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06740 2d7aaa381ebc7c7f7186ff99e0b183df 248 SMART SM00448 3 115 2.5E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS06740 2d7aaa381ebc7c7f7186ff99e0b183df 248 SMART SM00862 155 231 1.1E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS06740 2d7aaa381ebc7c7f7186ff99e0b183df 248 SUPERFAMILY SSF46894 132 232 1.39E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS06740 2d7aaa381ebc7c7f7186ff99e0b183df 248 SUPERFAMILY SSF52172 2 134 3.56E-34 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS06740 2d7aaa381ebc7c7f7186ff99e0b183df 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 6.5E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS06740 2d7aaa381ebc7c7f7186ff99e0b183df 248 PANTHER PTHR26402 3 237 2.8E-71 T 22-04-2016 LK04_RS19860 b50edd3cc23a34ced1c5b2dc712bd284 80 Pfam PF06643 Protein of unknown function (DUF1158) 1 77 4.7E-40 T 22-04-2016 IPR010590 Protein of unknown function DUF1158 LK04_RS19860 b50edd3cc23a34ced1c5b2dc712bd284 80 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 1 77 6.0E-16 T 22-04-2016 IPR010590 Protein of unknown function DUF1158 LK04_RS00010 b50edd3cc23a34ced1c5b2dc712bd284 80 Pfam PF06643 Protein of unknown function (DUF1158) 1 77 4.7E-40 T 22-04-2016 IPR010590 Protein of unknown function DUF1158 LK04_RS00010 b50edd3cc23a34ced1c5b2dc712bd284 80 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 1 77 6.0E-16 T 22-04-2016 IPR010590 Protein of unknown function DUF1158 LK04_RS16345 187ef28a9c537d2fa5cb26924ab19062 331 Pfam PF01136 Peptidase family U32 75 330 2.1E-65 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS16345 187ef28a9c537d2fa5cb26924ab19062 331 PANTHER PTHR30217:SF3 240 330 6.0E-209 T 22-04-2016 LK04_RS16345 187ef28a9c537d2fa5cb26924ab19062 331 PANTHER PTHR30217:SF3 1 218 6.0E-209 T 22-04-2016 LK04_RS16345 187ef28a9c537d2fa5cb26924ab19062 331 PANTHER PTHR30217 240 330 6.0E-209 T 22-04-2016 LK04_RS16345 187ef28a9c537d2fa5cb26924ab19062 331 PANTHER PTHR30217 1 218 6.0E-209 T 22-04-2016 LK04_RS16345 187ef28a9c537d2fa5cb26924ab19062 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 PANTHER PTHR10982 1 306 1.8E-161 T 22-04-2016 LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 Gene3D G3DSA:3.30.70.250 125 196 2.1E-31 T 22-04-2016 LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 SUPERFAMILY SSF55048 128 197 4.19E-18 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 7.2E-132 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 SUPERFAMILY SSF52151 190 307 1.86E-83 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 SUPERFAMILY SSF52151 4 122 1.86E-83 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 Pfam PF00698 Acyl transferase domain 6 291 4.5E-42 T 22-04-2016 IPR014043 Acyl transferase LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 Gene3D G3DSA:3.40.366.10 197 300 4.5E-74 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 Gene3D G3DSA:3.40.366.10 3 122 4.5E-74 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 PIRSF PIRSF000446 1 309 2.3E-144 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 LK04_RS11310 51b2b85390bfec8fed822ccc736075e6 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 2.3E-45 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 212 232 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 Pfam PF09312 SurA N-terminal domain 25 142 3.1E-43 T 22-04-2016 IPR015391 SurA N-terminal LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 SUPERFAMILY SSF109998 25 200 1.24E-41 T 22-04-2016 IPR027304 Trigger factor/SurA domain LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.232 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 Gene3D G3DSA:1.10.3120.10 37 115 1.7E-5 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 SUPERFAMILY SSF54534 173 275 3.14E-28 T 22-04-2016 LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 Pfam PF13616 PPIC-type PPIASE domain 166 272 5.2E-19 T 22-04-2016 LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 SUPERFAMILY SSF54534 283 385 2.75E-34 T 22-04-2016 LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 PANTHER PTHR10657 1 427 2.4E-159 T 22-04-2016 LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 PANTHER PTHR10657:SF15 1 427 2.4E-159 T 22-04-2016 LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 Gene3D G3DSA:3.10.50.40 282 406 1.2E-38 T 22-04-2016 LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 Gene3D G3DSA:3.10.50.40 166 277 6.6E-32 T 22-04-2016 LK04_RS15545 776d1d2a324046265e30ab8fa90c8d67 431 Pfam PF00639 PPIC-type PPIASE domain 289 380 3.2E-28 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 1.3E-45 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.6E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 Gene3D G3DSA:1.10.357.10 61 206 2.4E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 SUPERFAMILY SSF48498 84 203 7.63E-18 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 PANTHER PTHR30328 1 208 2.0E-93 T 22-04-2016 LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 SUPERFAMILY SSF46689 2 73 2.67E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 8.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 8.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 Gene3D G3DSA:1.10.10.60 3 60 2.2E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS13835 8e1f940a17fba8c6bdb6ace5b73d1f3b 212 PANTHER PTHR30328:SF26 1 208 2.0E-93 T 22-04-2016 LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 SUPERFAMILY SSF55874 337 476 1.57E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 SMART SM00388 265 329 0.0071 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 Pfam PF08918 PhoQ Sensor 9 186 4.9E-87 T 22-04-2016 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 Pfam PF00672 HAMP domain 195 259 6.9E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 PANTHER PTHR24423 207 480 7.1E-139 T 22-04-2016 LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 PANTHER PTHR24423 55 152 7.1E-139 T 22-04-2016 LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 Gene3D G3DSA:3.30.565.10 339 479 6.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 PANTHER PTHR24423:SF496 207 480 7.1E-139 T 22-04-2016 LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 PANTHER PTHR24423:SF496 55 152 7.1E-139 T 22-04-2016 LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 SUPERFAMILY SSF47384 248 325 3.14E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 476 1.2E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS11170 072c96f82703a1a6a84fb519b4ef81fc 486 SMART SM00387 374 480 9.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 668 44.059 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 SMART SM00490 460 546 1.3E-19 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 PANTHER PTHR24029 1 672 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Gene3D G3DSA:3.40.50.300 419 582 1.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Gene3D G3DSA:4.10.860.10 629 671 4.2E-18 T 22-04-2016 IPR001943 UVR domain GO:0005515 LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Gene3D G3DSA:3.30.2060.10 159 230 1.1E-10 T 22-04-2016 LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Pfam PF00271 Helicase conserved C-terminal domain 434 545 4.1E-18 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Gene3D G3DSA:3.40.50.300 5 89 1.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Gene3D G3DSA:3.40.50.300 388 407 1.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Gene3D G3DSA:3.40.50.300 278 338 1.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 666 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 SMART SM00487 9 425 1.3E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Pfam PF02151 UvrB/uvrC motif 634 667 4.6E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 SUPERFAMILY SSF52540 3 415 5.09E-136 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 SUPERFAMILY SSF46600 623 669 3.27E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 SUPERFAMILY SSF52540 37 82 7.07E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Pfam PF04851 Type III restriction enzyme, res subunit 13 87 1.1E-8 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 SUPERFAMILY SSF52540 459 583 7.07E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12865 6c62a13b6b22a4d08d394ac3772d3020 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 4.0E-22 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain LK04_RS02300 568f6c370803c1c2355f9347ba8d1287 407 PANTHER PTHR21021:SF19 148 401 9.5E-21 T 22-04-2016 LK04_RS02300 568f6c370803c1c2355f9347ba8d1287 407 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 204 403 7.9E-26 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS02300 568f6c370803c1c2355f9347ba8d1287 407 SUPERFAMILY SSF81606 186 354 2.49E-5 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS02300 568f6c370803c1c2355f9347ba8d1287 407 Gene3D G3DSA:3.10.580.10 26 152 9.5E-7 T 22-04-2016 LK04_RS02300 568f6c370803c1c2355f9347ba8d1287 407 SMART SM00331 179 406 8.3E-9 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS02300 568f6c370803c1c2355f9347ba8d1287 407 PANTHER PTHR21021 148 401 9.5E-21 T 22-04-2016 LK04_RS02300 568f6c370803c1c2355f9347ba8d1287 407 SUPERFAMILY SSF54631 25 147 1.16E-6 T 22-04-2016 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 Gene3D G3DSA:3.20.20.70 1004 1356 3.3E-140 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 Pfam PF01493 GXGXG motif 1426 1599 1.8E-51 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 Pfam PF00310 Glutamine amidotransferases class-II 21 423 4.3E-86 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 Pfam PF01645 Conserved region in glutamate synthase 991 1315 8.8E-103 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 Gene3D G3DSA:3.20.20.70 455 783 7.0E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 Pfam PF04898 Glutamate synthase central domain 461 739 4.1E-73 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 Gene3D G3DSA:3.60.20.10 21 437 3.7E-104 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 Gene3D G3DSA:2.160.20.60 1427 1651 1.3E-67 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 PANTHER PTHR11938 967 1418 0.0 T 22-04-2016 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 PANTHER PTHR11938 10 774 0.0 T 22-04-2016 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 PANTHER PTHR11938 1443 1658 0.0 T 22-04-2016 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 SUPERFAMILY SSF56235 21 425 1.21E-92 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 SUPERFAMILY SSF51395 982 1332 6.51E-158 T 22-04-2016 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 SUPERFAMILY SSF51395 450 818 6.51E-158 T 22-04-2016 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 PANTHER PTHR11938:SF1 967 1418 0.0 T 22-04-2016 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 PANTHER PTHR11938:SF1 10 774 0.0 T 22-04-2016 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 PANTHER PTHR11938:SF1 1443 1658 0.0 T 22-04-2016 LK04_RS16665 0d044312738cc15ffbadcbd21904ee69 1843 SUPERFAMILY SSF69336 1407 1647 5.1E-66 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 Pfam PF13091 PLD-like domain 1034 1133 4.3E-8 T 22-04-2016 IPR025202 Phospholipase D-like domain LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 PANTHER PTHR10887:SF340 794 976 2.4E-70 T 22-04-2016 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 PANTHER PTHR10887:SF340 542 759 2.4E-70 T 22-04-2016 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 PANTHER PTHR10887:SF340 274 346 2.4E-70 T 22-04-2016 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 SUPERFAMILY SSF56024 1030 1159 2.26E-10 T 22-04-2016 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 Pfam PF13245 Part of AAA domain 287 344 2.0E-8 T 22-04-2016 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 Gene3D G3DSA:3.40.50.300 791 821 1.7E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 Gene3D G3DSA:3.40.50.300 264 386 1.7E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 Gene3D G3DSA:3.40.50.300 690 750 1.7E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 Gene3D G3DSA:3.40.50.300 843 967 1.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 PIRSF PIRSF026306 1 1173 0.0 T 22-04-2016 IPR016834 Uncharacterised conserved protein UCP026306 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 Gene3D G3DSA:3.30.870.10 1026 1160 3.8E-12 T 22-04-2016 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 PANTHER PTHR10887 794 976 2.4E-70 T 22-04-2016 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 PANTHER PTHR10887 542 759 2.4E-70 T 22-04-2016 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 PANTHER PTHR10887 274 346 2.4E-70 T 22-04-2016 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 Pfam PF13087 AAA domain 795 969 3.7E-23 T 22-04-2016 LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 SUPERFAMILY SSF52540 270 347 3.02E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 SUPERFAMILY SSF52540 636 745 3.02E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 SUPERFAMILY SSF52540 409 481 3.02E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13540 ec4659ba6f2535d756f5d29204c73fce 1173 SUPERFAMILY SSF52540 791 1016 3.02E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 SMART SM00062 44 268 7.1E-37 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 SUPERFAMILY SSF53850 45 267 3.09E-40 T 22-04-2016 LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 475 48.646 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 Gene3D G3DSA:3.40.190.10 122 224 1.0E-5 T 22-04-2016 LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 Gene3D G3DSA:1.10.530.10 288 460 2.1E-36 T 22-04-2016 LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 SUPERFAMILY SSF53955 432 444 9.38E-35 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 SUPERFAMILY SSF53955 246 397 9.38E-35 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 Pfam PF01464 Transglycosylase SLT domain 297 400 4.4E-23 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 PANTHER PTHR21666 273 480 4.3E-131 T 22-04-2016 LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 PANTHER PTHR21666:SF215 273 480 4.3E-131 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 267 2.5E-34 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 Gene3D G3DSA:3.40.190.10 226 266 6.0E-16 T 22-04-2016 LK04_RS04075 b464e1842a30a9250eab90c0f6a63c64 485 Gene3D G3DSA:3.40.190.10 41 121 6.0E-16 T 22-04-2016 LK04_RS11090 b4053cc0b6560d6dfa6c2c0810dddc92 82 SUPERFAMILY SSF69047 4 51 4.71E-5 T 22-04-2016 IPR008462 CsbD-like LK04_RS11090 b4053cc0b6560d6dfa6c2c0810dddc92 82 Pfam PF05957 Bacterial protein of unknown function (DUF883) 6 82 1.3E-10 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB LK04_RS11090 b4053cc0b6560d6dfa6c2c0810dddc92 82 Gene3D G3DSA:1.10.1470.10 4 58 2.5E-8 T 22-04-2016 IPR008462 CsbD-like LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 PANTHER PTHR10264:SF27 1 304 7.4E-123 T 22-04-2016 LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 PANTHER PTHR10264 1 304 7.4E-123 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 SMART SM00244 18 176 1.5E-57 T 22-04-2016 IPR001107 Band 7 domain LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 PRINTS PR00721 Stomatin signature 128 151 2.5E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 PRINTS PR00721 Stomatin signature 152 170 2.5E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 PRINTS PR00721 Stomatin signature 108 125 2.5E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 PRINTS PR00721 Stomatin signature 171 192 2.5E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 PRINTS PR00721 Stomatin signature 73 94 2.5E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 SUPERFAMILY SSF117892 49 183 1.83E-40 T 22-04-2016 IPR001107 Band 7 domain LK04_RS13715 385a44138e2091dd4a9c7181ee758d4c 304 Pfam PF01145 SPFH domain / Band 7 family 22 191 6.0E-29 T 22-04-2016 IPR001107 Band 7 domain LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Gene3D G3DSA:3.40.50.1380 938 1072 9.7E-40 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 SMART SM01096 424 547 8.4E-74 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.4E-40 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Gene3D G3DSA:3.30.1490.20 141 199 5.9E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 SUPERFAMILY SSF52440 1 127 2.73E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 SUPERFAMILY SSF48108 396 554 1.06E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.394 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Gene3D G3DSA:3.40.50.20 539 663 3.3E-62 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.214 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 SUPERFAMILY SSF52440 557 676 8.49E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Gene3D G3DSA:1.10.1030.10 400 538 8.0E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Pfam PF02142 MGS-like domain 957 1041 1.7E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 PANTHER PTHR11405 1 1073 0.0 T 22-04-2016 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.3E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.3E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.3E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 3.3E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.3E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.3E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.3E-65 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Gene3D G3DSA:3.30.470.20 746 934 9.0E-82 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Gene3D G3DSA:3.30.470.20 200 399 6.6E-76 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 3.9E-75 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 2.2E-37 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 SUPERFAMILY SSF56059 674 934 1.59E-104 T 22-04-2016 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Gene3D G3DSA:3.30.1490.20 687 745 7.8E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 Gene3D G3DSA:3.40.50.20 3 108 1.4E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 PANTHER PTHR11405:SF5 1 1073 0.0 T 22-04-2016 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 SMART SM00851 956 1042 9.1E-31 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 SUPERFAMILY SSF56059 128 401 2.47E-109 T 22-04-2016 LK04_RS15580 82a9dcf412fb9139f5e237a3f985b6e4 1074 SUPERFAMILY SSF52335 938 1071 5.76E-35 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS11290 f368daf2b0b73ee2afc9561b1f268b3e 270 PANTHER PTHR11825 3 248 1.4E-82 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LK04_RS11290 f368daf2b0b73ee2afc9561b1f268b3e 270 PANTHER PTHR11825:SF55 3 248 1.4E-82 T 22-04-2016 LK04_RS11290 f368daf2b0b73ee2afc9561b1f268b3e 270 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 2 262 2.0E-106 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 LK04_RS11290 f368daf2b0b73ee2afc9561b1f268b3e 270 SUPERFAMILY SSF56752 3 256 4.45E-68 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LK04_RS11290 f368daf2b0b73ee2afc9561b1f268b3e 270 Gene3D G3DSA:3.20.10.10 121 261 4.7E-40 T 22-04-2016 LK04_RS11290 f368daf2b0b73ee2afc9561b1f268b3e 270 Pfam PF01063 Amino-transferase class IV 23 246 1.2E-45 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LK04_RS11290 f368daf2b0b73ee2afc9561b1f268b3e 270 Gene3D G3DSA:3.30.470.10 2 105 3.6E-31 T 22-04-2016 LK04_RS02370 2cd6e7588c3393bfaab18ef109129bfe 175 SUPERFAMILY SSF49401 20 175 5.97E-28 T 22-04-2016 IPR008966 Adhesion domain LK04_RS02370 2cd6e7588c3393bfaab18ef109129bfe 175 Gene3D G3DSA:2.60.40.1090 17 174 1.3E-24 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LK04_RS02370 2cd6e7588c3393bfaab18ef109129bfe 175 PANTHER PTHR33420 16 75 4.4E-15 T 22-04-2016 LK04_RS02370 2cd6e7588c3393bfaab18ef109129bfe 175 PANTHER PTHR33420 91 175 4.4E-15 T 22-04-2016 LK04_RS02100 78f2556785960954b09e6cc68bd5d8ef 219 PANTHER PTHR30353:SF10 1 216 1.7E-142 T 22-04-2016 LK04_RS02100 78f2556785960954b09e6cc68bd5d8ef 219 PANTHER PTHR30353 1 216 1.7E-142 T 22-04-2016 IPR032818 DedA family LK04_RS02100 78f2556785960954b09e6cc68bd5d8ef 219 Pfam PF09335 SNARE associated Golgi protein 48 173 1.4E-18 T 22-04-2016 IPR032816 SNARE associated Golgi protein LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 Gene3D G3DSA:3.90.800.10 101 209 2.1E-47 T 22-04-2016 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 Gene3D G3DSA:1.10.1160.10 263 338 4.9E-37 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 Gene3D G3DSA:2.40.240.10 348 462 8.0E-49 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.2E-123 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 Gene3D G3DSA:2.40.240.10 463 548 1.4E-33 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 PANTHER PTHR11451 7 247 7.6E-237 T 22-04-2016 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 PANTHER PTHR11451 267 552 7.6E-237 T 22-04-2016 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 PANTHER PTHR11451:SF29 7 247 7.6E-237 T 22-04-2016 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 PANTHER PTHR11451:SF29 267 552 7.6E-237 T 22-04-2016 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 53.402 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.5E-293 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 SUPERFAMILY SSF50715 340 548 2.51E-77 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 Gene3D G3DSA:3.40.50.620 212 262 6.1E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 Gene3D G3DSA:3.40.50.620 28 96 6.1E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 SUPERFAMILY SSF52374 10 337 4.22E-100 T 22-04-2016 LK04_RS13220 15efe9671e18d4fcab2e7da28c6e3f9a 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.7E-61 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 LK04_RS16950 a9e6ca37d0fd7f90ccfc93dc90d2b8b3 473 Pfam PF00474 Sodium:solute symporter family 39 379 9.0E-28 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS16950 a9e6ca37d0fd7f90ccfc93dc90d2b8b3 473 PANTHER PTHR11819 5 441 1.8E-38 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS00155 05aad8ffa86c7491c8083a1dbc7b881b 610 Gene3D G3DSA:3.40.50.300 362 597 9.5E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00155 05aad8ffa86c7491c8083a1dbc7b881b 610 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS00155 05aad8ffa86c7491c8083a1dbc7b881b 610 Pfam PF00005 ABC transporter 379 532 2.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS00155 05aad8ffa86c7491c8083a1dbc7b881b 610 SMART SM00382 387 578 2.8E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS00155 05aad8ffa86c7491c8083a1dbc7b881b 610 SUPERFAMILY SSF52540 352 602 5.62E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00155 05aad8ffa86c7491c8083a1dbc7b881b 610 Pfam PF00664 ABC transporter transmembrane region 43 300 7.8E-14 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS00155 05aad8ffa86c7491c8083a1dbc7b881b 610 PANTHER PTHR24221 3 610 0.0 T 22-04-2016 LK04_RS00155 05aad8ffa86c7491c8083a1dbc7b881b 610 Gene3D G3DSA:1.20.1560.10 30 335 6.1E-33 T 22-04-2016 LK04_RS00155 05aad8ffa86c7491c8083a1dbc7b881b 610 SUPERFAMILY SSF90123 29 343 1.7E-47 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS00155 05aad8ffa86c7491c8083a1dbc7b881b 610 PANTHER PTHR24221:SF203 3 610 0.0 T 22-04-2016 LK04_RS03500 7f6a8d053668b39f9052038599b7a72c 238 PANTHER PTHR32125:SF4 10 238 4.0E-74 T 22-04-2016 LK04_RS03500 7f6a8d053668b39f9052038599b7a72c 238 Gene3D G3DSA:3.90.550.10 10 232 4.7E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS03500 7f6a8d053668b39f9052038599b7a72c 238 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 228 3.6E-72 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS03500 7f6a8d053668b39f9052038599b7a72c 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 231 6.4E-83 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS03500 7f6a8d053668b39f9052038599b7a72c 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS03500 7f6a8d053668b39f9052038599b7a72c 238 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 9 232 29.702 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS03500 7f6a8d053668b39f9052038599b7a72c 238 PANTHER PTHR32125 10 238 4.0E-74 T 22-04-2016 LK04_RS03500 7f6a8d053668b39f9052038599b7a72c 238 SUPERFAMILY SSF53448 10 229 2.5E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS01370 46811e87b818e89a0c447ca39002aab9 147 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 127 6.4E-33 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type LK04_RS01370 46811e87b818e89a0c447ca39002aab9 147 Gene3D G3DSA:1.10.10.10 2 131 1.4E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01370 46811e87b818e89a0c447ca39002aab9 147 SUPERFAMILY SSF46785 2 129 1.45E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01370 46811e87b818e89a0c447ca39002aab9 147 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site LK04_RS01370 46811e87b818e89a0c447ca39002aab9 147 Pfam PF02082 Transcriptional regulator 2 82 7.0E-23 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type LK04_RS01370 46811e87b818e89a0c447ca39002aab9 147 PANTHER PTHR33221:SF4 2 147 7.4E-71 T 22-04-2016 LK04_RS01370 46811e87b818e89a0c447ca39002aab9 147 PANTHER PTHR33221 2 147 7.4E-71 T 22-04-2016 LK04_RS02200 f0198a2f4c94e4a89778e558099ad6de 354 SMART SM00382 28 215 1.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS02200 f0198a2f4c94e4a89778e558099ad6de 354 SUPERFAMILY SSF52540 4 243 2.66E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02200 f0198a2f4c94e4a89778e558099ad6de 354 PANTHER PTHR24220:SF151 5 238 9.6E-110 T 22-04-2016 LK04_RS02200 f0198a2f4c94e4a89778e558099ad6de 354 Gene3D G3DSA:3.40.50.300 3 238 2.0E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02200 f0198a2f4c94e4a89778e558099ad6de 354 PANTHER PTHR24220 5 238 9.6E-110 T 22-04-2016 LK04_RS02200 f0198a2f4c94e4a89778e558099ad6de 354 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS02200 f0198a2f4c94e4a89778e558099ad6de 354 Pfam PF00005 ABC transporter 19 165 1.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS07075 5322fd3af1227c955dd35496558bc375 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 2.9E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS07075 5322fd3af1227c955dd35496558bc375 222 PANTHER PTHR30614 5 220 8.3E-122 T 22-04-2016 LK04_RS07075 5322fd3af1227c955dd35496558bc375 222 Gene3D G3DSA:1.10.3720.10 11 216 3.9E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS07075 5322fd3af1227c955dd35496558bc375 222 SUPERFAMILY SSF161098 13 206 1.57E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS07075 5322fd3af1227c955dd35496558bc375 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.4E-35 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS07075 5322fd3af1227c955dd35496558bc375 222 PANTHER PTHR30614:SF18 5 220 8.3E-122 T 22-04-2016 LK04_RS05830 99c2129f1bcee5f1aec5b68868bf4db1 221 SUPERFAMILY SSF55620 5 219 1.41E-76 T 22-04-2016 LK04_RS05830 99c2129f1bcee5f1aec5b68868bf4db1 221 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LK04_RS05830 99c2129f1bcee5f1aec5b68868bf4db1 221 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LK04_RS05830 99c2129f1bcee5f1aec5b68868bf4db1 221 Gene3D G3DSA:1.10.286.10 4 86 1.3E-32 T 22-04-2016 LK04_RS05830 99c2129f1bcee5f1aec5b68868bf4db1 221 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 3.3E-85 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LK04_RS05830 99c2129f1bcee5f1aec5b68868bf4db1 221 PANTHER PTHR11109 1 220 1.8E-102 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LK04_RS05830 99c2129f1bcee5f1aec5b68868bf4db1 221 Pfam PF01227 GTP cyclohydrolase I 41 218 3.5E-63 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LK04_RS05830 99c2129f1bcee5f1aec5b68868bf4db1 221 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 34.03 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LK04_RS05830 99c2129f1bcee5f1aec5b68868bf4db1 221 Gene3D G3DSA:3.30.1130.10 92 219 6.8E-51 T 22-04-2016 LK04_RS14170 1c32d58a525779a61f639cde68713f48 650 PANTHER PTHR23028 4 552 4.9E-88 T 22-04-2016 LK04_RS14170 1c32d58a525779a61f639cde68713f48 650 PANTHER PTHR23028:SF53 4 552 4.9E-88 T 22-04-2016 LK04_RS14170 1c32d58a525779a61f639cde68713f48 650 Pfam PF01757 Acyltransferase family 11 326 4.2E-25 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 SUPERFAMILY SSF56024 65 315 8.63E-47 T 22-04-2016 LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 PANTHER PTHR21248:SF9 18 486 6.7E-291 T 22-04-2016 LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 2.0E-7 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 Gene3D G3DSA:3.30.870.10 111 316 5.2E-34 T 22-04-2016 LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 SMART SM00155 399 426 2.7E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 SMART SM00155 219 246 5.5E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.499 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 Gene3D G3DSA:3.30.870.10 317 459 1.0E-34 T 22-04-2016 LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 Pfam PF13091 PLD-like domain 134 244 1.1E-11 T 22-04-2016 IPR025202 Phospholipase D-like domain LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 Pfam PF13091 PLD-like domain 329 443 8.4E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 1.3E-207 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 SUPERFAMILY SSF56024 273 473 2.92E-47 T 22-04-2016 LK04_RS08135 a8e6d899341ad17ee54b09c20871cdc0 486 PANTHER PTHR21248 18 486 6.7E-291 T 22-04-2016 LK04_RS05655 ec42e8584e38dd53b83501ca4de32e37 550 Gene3D G3DSA:1.20.1560.10 7 302 6.1E-16 T 22-04-2016 LK04_RS05655 ec42e8584e38dd53b83501ca4de32e37 550 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS05655 ec42e8584e38dd53b83501ca4de32e37 550 SUPERFAMILY SSF90123 7 303 1.83E-22 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS05655 ec42e8584e38dd53b83501ca4de32e37 550 PANTHER PTHR24220:SF425 324 529 1.2E-111 T 22-04-2016 LK04_RS05655 ec42e8584e38dd53b83501ca4de32e37 550 SUPERFAMILY SSF52540 320 537 2.75E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05655 ec42e8584e38dd53b83501ca4de32e37 550 SMART SM00382 348 526 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS05655 ec42e8584e38dd53b83501ca4de32e37 550 Pfam PF00005 ABC transporter 341 477 6.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS05655 ec42e8584e38dd53b83501ca4de32e37 550 Gene3D G3DSA:3.40.50.300 322 531 1.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05655 ec42e8584e38dd53b83501ca4de32e37 550 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 3 527 9.1E-110 T 22-04-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 LK04_RS05655 ec42e8584e38dd53b83501ca4de32e37 550 PANTHER PTHR24220 324 529 1.2E-111 T 22-04-2016 LK04_RS18435 5eeef57e2502490dac6a24e0b4036212 505 Gene3D G3DSA:3.10.105.10 263 474 2.3E-53 T 22-04-2016 LK04_RS18435 5eeef57e2502490dac6a24e0b4036212 505 Gene3D G3DSA:3.90.76.10 37 189 6.0E-35 T 22-04-2016 LK04_RS18435 5eeef57e2502490dac6a24e0b4036212 505 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 423 3.7E-91 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS18435 5eeef57e2502490dac6a24e0b4036212 505 PANTHER PTHR30290:SF14 16 505 1.1E-126 T 22-04-2016 LK04_RS18435 5eeef57e2502490dac6a24e0b4036212 505 PANTHER PTHR30290 16 505 1.1E-126 T 22-04-2016 LK04_RS18435 5eeef57e2502490dac6a24e0b4036212 505 PIRSF PIRSF002741 11 500 9.4E-107 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS18435 5eeef57e2502490dac6a24e0b4036212 505 SUPERFAMILY SSF53850 25 503 1.25E-131 T 22-04-2016 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 Gene3D G3DSA:1.20.150.20 383 510 2.1E-47 T 22-04-2016 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 3.2E-13 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 PANTHER PTHR15184 1 496 2.4E-289 T 22-04-2016 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 PANTHER PTHR15184:SF3 1 496 2.4E-289 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 6.5E-259 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 SUPERFAMILY SSF47917 383 511 1.62E-44 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 SUPERFAMILY SSF52540 96 381 5.58E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 3.2E-44 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.3E-72 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 Gene3D G3DSA:3.40.50.300 94 382 2.4E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.022 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19015 82e316d7177a2a872bf235e2d43e8d5c 513 Gene3D G3DSA:2.40.30.20 1 93 8.2E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS18445 cec6ad117cb9fd271fb98faeaa231f9c 293 PANTHER PTHR30465:SF10 9 292 4.8E-121 T 22-04-2016 LK04_RS18445 cec6ad117cb9fd271fb98faeaa231f9c 293 PANTHER PTHR30465 9 292 4.8E-121 T 22-04-2016 LK04_RS18445 cec6ad117cb9fd271fb98faeaa231f9c 293 SUPERFAMILY SSF161098 85 272 6.28E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18445 cec6ad117cb9fd271fb98faeaa231f9c 293 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 58 1.3E-10 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS18445 cec6ad117cb9fd271fb98faeaa231f9c 293 Gene3D G3DSA:1.10.3720.10 83 288 4.6E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18445 cec6ad117cb9fd271fb98faeaa231f9c 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 289 2.0E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14255 7ea114d8cc4c1b44615e9a1cd1a781cc 310 Pfam PF06675 Protein of unknown function (DUF1177) 39 308 1.5E-136 T 22-04-2016 IPR009561 Protein of unknown function DUF1177 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 Gene3D G3DSA:3.40.50.740 361 453 1.2E-42 T 22-04-2016 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 Gene3D G3DSA:3.40.50.740 44 146 1.2E-42 T 22-04-2016 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 Gene3D G3DSA:3.90.55.10 454 556 2.0E-35 T 22-04-2016 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 663 690 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 452 469 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 PANTHER PTHR11615:SF19 38 750 3.8E-208 T 22-04-2016 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 Gene3D G3DSA:2.40.40.20 599 750 7.5E-51 T 22-04-2016 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 Pfam PF01568 Molydopterin dinucleotide binding domain 624 744 5.7E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 PANTHER PTHR11615 38 750 3.8E-208 T 22-04-2016 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 Pfam PF00384 Molybdopterin oxidoreductase 51 507 4.0E-63 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 SUPERFAMILY SSF53706 10 609 1.83E-148 T 22-04-2016 LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 SUPERFAMILY SSF50692 617 750 1.74E-36 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain LK04_RS03120 39c1fd23b616d6ece36c00fcf2723298 753 Gene3D G3DSA:3.40.228.10 152 360 4.5E-43 T 22-04-2016 LK04_RS19360 d8b830b0d8e025724398e13a729b19da 213 PANTHER PTHR19278 1 213 9.5E-142 T 22-04-2016 LK04_RS19360 d8b830b0d8e025724398e13a729b19da 213 Pfam PF00156 Phosphoribosyl transferase domain 50 160 3.8E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LK04_RS19360 d8b830b0d8e025724398e13a729b19da 213 PANTHER PTHR19278:SF36 1 213 9.5E-142 T 22-04-2016 LK04_RS19360 d8b830b0d8e025724398e13a729b19da 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.577 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS19360 d8b830b0d8e025724398e13a729b19da 213 Gene3D G3DSA:3.40.50.2020 7 212 1.0E-81 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS19360 d8b830b0d8e025724398e13a729b19da 213 SUPERFAMILY SSF53271 2 211 4.69E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS19360 d8b830b0d8e025724398e13a729b19da 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 186 4.0E-66 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS06295 25dde0a384c7f66b750eebaa365d3e87 419 SUPERFAMILY SSF142764 3 415 3.92E-127 T 22-04-2016 LK04_RS06295 25dde0a384c7f66b750eebaa365d3e87 419 PANTHER PTHR30304:SF3 128 419 1.2E-104 T 22-04-2016 LK04_RS06295 25dde0a384c7f66b750eebaa365d3e87 419 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 253 410 4.8E-42 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain LK04_RS06295 25dde0a384c7f66b750eebaa365d3e87 419 Pfam PF07005 Putative sugar-binding N-terminal domain 3 225 1.8E-69 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain LK04_RS06295 25dde0a384c7f66b750eebaa365d3e87 419 PANTHER PTHR30304 128 419 1.2E-104 T 22-04-2016 LK04_RS05810 dce172f7f95f5b37862f54cdac471d98 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 5.1E-120 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 LK04_RS05810 dce172f7f95f5b37862f54cdac471d98 280 PANTHER PTHR10061 4 280 6.9E-167 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 LK04_RS05810 dce172f7f95f5b37862f54cdac471d98 280 SUPERFAMILY SSF53474 5 278 2.79E-88 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS05810 dce172f7f95f5b37862f54cdac471d98 280 Pfam PF00756 Putative esterase 25 272 6.7E-65 T 22-04-2016 IPR000801 Putative esterase LK04_RS05810 dce172f7f95f5b37862f54cdac471d98 280 Gene3D G3DSA:3.40.50.1820 5 278 1.1E-73 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS14650 9844bcd11a75b00be07a962921b9c3b4 227 Gene3D G3DSA:3.40.50.1000 1 222 3.8E-24 T 22-04-2016 IPR023214 HAD-like domain LK04_RS14650 9844bcd11a75b00be07a962921b9c3b4 227 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 221 2.5E-90 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 LK04_RS14650 9844bcd11a75b00be07a962921b9c3b4 227 SUPERFAMILY SSF56784 1 222 7.51E-60 T 22-04-2016 IPR023214 HAD-like domain LK04_RS14650 9844bcd11a75b00be07a962921b9c3b4 227 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 41.596 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 LK04_RS14650 9844bcd11a75b00be07a962921b9c3b4 227 PANTHER PTHR20371 2 204 2.1E-96 T 22-04-2016 LK04_RS14650 9844bcd11a75b00be07a962921b9c3b4 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.9E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS14650 9844bcd11a75b00be07a962921b9c3b4 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 1.9E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS14650 9844bcd11a75b00be07a962921b9c3b4 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 1.9E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS14650 9844bcd11a75b00be07a962921b9c3b4 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 1.9E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS14650 9844bcd11a75b00be07a962921b9c3b4 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 196 4.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS17000 a4e66927d5b7a26a39ffe7b65a1cb96a 301 PANTHER PTHR12862 10 283 8.5E-42 T 22-04-2016 LK04_RS17000 a4e66927d5b7a26a39ffe7b65a1cb96a 301 PANTHER PTHR12862:SF5 10 283 8.5E-42 T 22-04-2016 LK04_RS17000 a4e66927d5b7a26a39ffe7b65a1cb96a 301 SUPERFAMILY SSF53067 13 121 9.29E-19 T 22-04-2016 LK04_RS17000 a4e66927d5b7a26a39ffe7b65a1cb96a 301 SUPERFAMILY SSF53067 125 293 1.81E-36 T 22-04-2016 LK04_RS17000 a4e66927d5b7a26a39ffe7b65a1cb96a 301 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 16 293 4.8E-28 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type LK04_RS12565 014e897bdd264c803e638cae255fce99 385 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 370 2.6E-107 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LK04_RS12565 014e897bdd264c803e638cae255fce99 385 PANTHER PTHR11014:SF63 8 385 5.8E-149 T 22-04-2016 LK04_RS12565 014e897bdd264c803e638cae255fce99 385 SUPERFAMILY SSF55031 179 292 1.44E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS12565 014e897bdd264c803e638cae255fce99 385 Gene3D G3DSA:3.30.70.360 177 293 6.3E-38 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS12565 014e897bdd264c803e638cae255fce99 385 PANTHER PTHR11014 8 385 5.8E-149 T 22-04-2016 LK04_RS12565 014e897bdd264c803e638cae255fce99 385 Pfam PF07687 Peptidase dimerisation domain 181 275 7.8E-14 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS12565 014e897bdd264c803e638cae255fce99 385 Pfam PF01546 Peptidase family M20/M25/M40 69 379 3.6E-34 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS12565 014e897bdd264c803e638cae255fce99 385 PIRSF PIRSF005962 4 385 1.4E-124 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LK04_RS12565 014e897bdd264c803e638cae255fce99 385 Gene3D G3DSA:3.40.630.10 294 383 5.1E-99 T 22-04-2016 LK04_RS12565 014e897bdd264c803e638cae255fce99 385 Gene3D G3DSA:3.40.630.10 9 174 5.1E-99 T 22-04-2016 LK04_RS12565 014e897bdd264c803e638cae255fce99 385 SUPERFAMILY SSF53187 294 383 2.78E-88 T 22-04-2016 LK04_RS12565 014e897bdd264c803e638cae255fce99 385 SUPERFAMILY SSF53187 8 193 2.78E-88 T 22-04-2016 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 PANTHER PTHR30562 1 479 2.1E-215 T 22-04-2016 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 SUPERFAMILY SSF51735 4 277 3.31E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 PRINTS PR00084 Mannitol dehydrogenase signature 214 227 4.2E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 PRINTS PR00084 Mannitol dehydrogenase signature 175 188 4.2E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 PRINTS PR00084 Mannitol dehydrogenase signature 244 259 4.2E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 PRINTS PR00084 Mannitol dehydrogenase signature 25 35 4.2E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 Gene3D G3DSA:1.10.1040.10 279 483 1.1E-72 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 214 226 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 SUPERFAMILY SSF48179 279 483 2.72E-63 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 PANTHER PTHR30562:SF9 1 479 2.1E-215 T 22-04-2016 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 213 455 1.2E-89 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 24 184 3.2E-42 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LK04_RS05940 479b808f5a21f2cd7f3f4fae6900bde6 486 Gene3D G3DSA:3.40.50.720 5 277 6.2E-106 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08215 b88bce9fbf6b13ff6ef4b7a02c378a92 218 Gene3D G3DSA:2.40.10.10 93 172 8.3E-6 T 22-04-2016 LK04_RS08215 b88bce9fbf6b13ff6ef4b7a02c378a92 218 SUPERFAMILY SSF50494 47 207 4.27E-15 T 22-04-2016 IPR009003 Peptidase S1, PA clan LK04_RS00295 d1d298e6da2ff004afce10e427fa0436 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 59 1.1E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS00295 d1d298e6da2ff004afce10e427fa0436 331 SUPERFAMILY SSF53822 70 327 6.09E-36 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS00295 d1d298e6da2ff004afce10e427fa0436 331 SUPERFAMILY SSF47413 11 67 2.0E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS00295 d1d298e6da2ff004afce10e427fa0436 331 Gene3D G3DSA:3.40.50.2300 70 173 8.4E-25 T 22-04-2016 LK04_RS00295 d1d298e6da2ff004afce10e427fa0436 331 SMART SM00354 9 82 7.0E-23 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS00295 d1d298e6da2ff004afce10e427fa0436 331 Gene3D G3DSA:3.40.50.2300 174 315 2.9E-22 T 22-04-2016 LK04_RS00295 d1d298e6da2ff004afce10e427fa0436 331 PANTHER PTHR30146 9 324 4.7E-52 T 22-04-2016 LK04_RS00295 d1d298e6da2ff004afce10e427fa0436 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 71 273 1.3E-13 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LK04_RS00295 d1d298e6da2ff004afce10e427fa0436 331 Gene3D G3DSA:1.10.260.40 10 69 9.6E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06410 584f53dea87a8375c4c24af17454969a 277 PANTHER PTHR30465:SF2 1 265 4.2E-81 T 22-04-2016 LK04_RS06410 584f53dea87a8375c4c24af17454969a 277 SUPERFAMILY SSF161098 72 258 5.23E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06410 584f53dea87a8375c4c24af17454969a 277 PANTHER PTHR30465 1 265 4.2E-81 T 22-04-2016 LK04_RS06410 584f53dea87a8375c4c24af17454969a 277 Gene3D G3DSA:1.10.3720.10 71 273 2.8E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06410 584f53dea87a8375c4c24af17454969a 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 274 2.0E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18075 768130d44a5edcfcee9f8a8d35175ac4 274 Gene3D G3DSA:3.10.310.10 1 121 6.9E-50 T 22-04-2016 LK04_RS18075 768130d44a5edcfcee9f8a8d35175ac4 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.565 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS18075 768130d44a5edcfcee9f8a8d35175ac4 274 Gene3D G3DSA:3.10.310.10 122 262 6.6E-52 T 22-04-2016 LK04_RS18075 768130d44a5edcfcee9f8a8d35175ac4 274 SUPERFAMILY SSF54506 2 273 1.96E-56 T 22-04-2016 LK04_RS18075 768130d44a5edcfcee9f8a8d35175ac4 274 Pfam PF01678 Diaminopimelate epimerase 3 123 1.3E-33 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS18075 768130d44a5edcfcee9f8a8d35175ac4 274 Pfam PF01678 Diaminopimelate epimerase 152 267 2.2E-32 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS18075 768130d44a5edcfcee9f8a8d35175ac4 274 PANTHER PTHR31689 1 272 1.1E-138 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS18075 768130d44a5edcfcee9f8a8d35175ac4 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS18075 768130d44a5edcfcee9f8a8d35175ac4 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 2.1E-100 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS04325 03f76c41cb029b50b6f2b3488c0e72d8 212 Gene3D G3DSA:3.40.50.170 1 195 7.8E-70 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS04325 03f76c41cb029b50b6f2b3488c0e72d8 212 Pfam PF00551 Formyl transferase 2 182 1.9E-64 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS04325 03f76c41cb029b50b6f2b3488c0e72d8 212 SUPERFAMILY SSF53328 2 202 9.29E-65 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS04325 03f76c41cb029b50b6f2b3488c0e72d8 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.899 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 LK04_RS04325 03f76c41cb029b50b6f2b3488c0e72d8 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS04325 03f76c41cb029b50b6f2b3488c0e72d8 212 PANTHER PTHR10520 1 194 4.4E-102 T 22-04-2016 LK04_RS04325 03f76c41cb029b50b6f2b3488c0e72d8 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 1.4E-80 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 PANTHER PTHR13789:SF225 416 440 1.4E-83 T 22-04-2016 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 PANTHER PTHR13789:SF225 1 170 1.4E-83 T 22-04-2016 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 Pfam PF02080 TrkA-C domain 391 451 1.5E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 Pfam PF02080 TrkA-C domain 157 225 3.7E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 SUPERFAMILY SSF51735 1 152 1.47E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 SUPERFAMILY SSF51735 232 376 1.43E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 PANTHER PTHR13789 416 440 1.4E-83 T 22-04-2016 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 PANTHER PTHR13789 1 170 1.4E-83 T 22-04-2016 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.5E-35 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 3.5E-35 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.5E-35 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.5E-35 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.5E-35 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 SUPERFAMILY SSF116726 148 226 2.88E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 Pfam PF02254 TrkA-N domain 3 116 4.1E-30 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 Pfam PF02254 TrkA-N domain 235 350 1.6E-26 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 Gene3D G3DSA:3.40.50.720 1 152 1.4E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 Gene3D G3DSA:3.40.50.720 233 376 6.6E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01025 bac75c726a07b99cd0103d49516316c6 458 SUPERFAMILY SSF116726 391 443 5.62E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS06795 45302870943e118ea056fa6b8f27fe8c 759 Pfam PF00593 TonB dependent receptor 513 757 1.8E-35 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS06795 45302870943e118ea056fa6b8f27fe8c 759 PANTHER PTHR32552:SF8 496 759 2.8E-262 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LK04_RS06795 45302870943e118ea056fa6b8f27fe8c 759 PANTHER PTHR32552:SF8 3 477 2.8E-262 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LK04_RS06795 45302870943e118ea056fa6b8f27fe8c 759 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 168 4.6E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS06795 45302870943e118ea056fa6b8f27fe8c 759 PANTHER PTHR32552 496 759 2.8E-262 T 22-04-2016 LK04_RS06795 45302870943e118ea056fa6b8f27fe8c 759 PANTHER PTHR32552 3 477 2.8E-262 T 22-04-2016 LK04_RS06795 45302870943e118ea056fa6b8f27fe8c 759 Gene3D G3DSA:2.170.130.10 33 178 4.2E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS06795 45302870943e118ea056fa6b8f27fe8c 759 Gene3D G3DSA:2.40.170.20 185 759 1.1E-141 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS06795 45302870943e118ea056fa6b8f27fe8c 759 SUPERFAMILY SSF56935 40 759 1.39E-121 T 22-04-2016 LK04_RS06795 45302870943e118ea056fa6b8f27fe8c 759 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 759 2.8E-77 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 Pfam PF02253 Phospholipase A1 44 288 3.4E-95 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 SUPERFAMILY SSF56931 40 291 4.71E-92 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 1.6E-77 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 206 224 1.6E-77 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 239 256 1.6E-77 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 1.6E-77 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 1.6E-77 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 1.6E-77 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 261 281 1.6E-77 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 1.6E-77 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 PANTHER PTHR40457 1 292 8.9E-153 T 22-04-2016 LK04_RS18030 fa860e93086f2f32ed3f7064a473599b 292 Gene3D G3DSA:2.40.230.10 37 291 4.1E-102 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 PRINTS PR00990 Ribokinase signature 5 26 1.5E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 PRINTS PR00990 Ribokinase signature 217 228 1.5E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 PRINTS PR00990 Ribokinase signature 104 117 1.5E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 PRINTS PR00990 Ribokinase signature 32 51 1.5E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 PRINTS PR00990 Ribokinase signature 173 188 1.5E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 SUPERFAMILY SSF53613 1 302 8.42E-82 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 PANTHER PTHR10584 1 303 4.3E-110 T 22-04-2016 LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 PANTHER PTHR10584:SF184 1 303 4.3E-110 T 22-04-2016 LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 PIRSF PIRSF000535 6 304 2.3E-26 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 Pfam PF00294 pfkB family carbohydrate kinase 2 294 1.9E-65 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 Gene3D G3DSA:3.40.1190.20 1 303 3.5E-92 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS15925 06c5c4c0af5f2ef17b4c68200b41b51c 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 298 4.5E-111 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 LK04_RS15335 be7492939a01e9e5019878a0962ca4ce 399 PANTHER PTHR30012:SF0 6 399 6.1E-125 T 22-04-2016 LK04_RS15335 be7492939a01e9e5019878a0962ca4ce 399 Pfam PF00482 Type II secretion system (T2SS), protein F 65 187 1.2E-27 T 22-04-2016 IPR018076 Type II secretion system F domain LK04_RS15335 be7492939a01e9e5019878a0962ca4ce 399 Pfam PF00482 Type II secretion system (T2SS), protein F 272 390 9.3E-24 T 22-04-2016 IPR018076 Type II secretion system F domain LK04_RS15335 be7492939a01e9e5019878a0962ca4ce 399 PANTHER PTHR30012 6 399 6.1E-125 T 22-04-2016 LK04_RS15335 be7492939a01e9e5019878a0962ca4ce 399 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 LK04_RS15335 be7492939a01e9e5019878a0962ca4ce 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 9.6E-14 T 22-04-2016 IPR003004 GspF/PilC family LK04_RS15335 be7492939a01e9e5019878a0962ca4ce 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 9.6E-14 T 22-04-2016 IPR003004 GspF/PilC family LK04_RS15335 be7492939a01e9e5019878a0962ca4ce 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 9.6E-14 T 22-04-2016 IPR003004 GspF/PilC family LK04_RS15335 be7492939a01e9e5019878a0962ca4ce 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 9.6E-14 T 22-04-2016 IPR003004 GspF/PilC family LK04_RS13635 af6d9fc9d9d2f5d5240059f708f96df1 493 PANTHER PTHR30408:SF4 178 482 1.6E-90 T 22-04-2016 LK04_RS13635 af6d9fc9d9d2f5d5240059f708f96df1 493 Pfam PF02384 N-6 DNA Methylase 163 461 4.0E-80 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 LK04_RS13635 af6d9fc9d9d2f5d5240059f708f96df1 493 Gene3D G3DSA:3.40.50.150 179 404 5.6E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS13635 af6d9fc9d9d2f5d5240059f708f96df1 493 PANTHER PTHR30408 178 482 1.6E-90 T 22-04-2016 LK04_RS13635 af6d9fc9d9d2f5d5240059f708f96df1 493 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 201 215 1.1E-8 T 22-04-2016 LK04_RS13635 af6d9fc9d9d2f5d5240059f708f96df1 493 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 177 193 1.1E-8 T 22-04-2016 LK04_RS13635 af6d9fc9d9d2f5d5240059f708f96df1 493 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 278 290 1.1E-8 T 22-04-2016 LK04_RS13635 af6d9fc9d9d2f5d5240059f708f96df1 493 Pfam PF12161 HsdM N-terminal domain 8 140 6.4E-13 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain LK04_RS13635 af6d9fc9d9d2f5d5240059f708f96df1 493 SUPERFAMILY SSF53335 9 491 1.7E-104 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS05675 b6b1da4253bedc6aaca8b08829c1fb72 584 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 1.4E-105 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal LK04_RS05675 b6b1da4253bedc6aaca8b08829c1fb72 584 Gene3D G3DSA:3.40.720.10 260 518 1.7E-23 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LK04_RS05675 b6b1da4253bedc6aaca8b08829c1fb72 584 PIRSF PIRSF004950 6 584 8.0E-201 T 22-04-2016 IPR012159 Inner membrane protein YejM LK04_RS05675 b6b1da4253bedc6aaca8b08829c1fb72 584 SUPERFAMILY SSF53649 256 557 1.8E-39 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LK04_RS05675 b6b1da4253bedc6aaca8b08829c1fb72 584 Pfam PF00884 Sulfatase 271 498 5.1E-16 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LK04_RS05675 b6b1da4253bedc6aaca8b08829c1fb72 584 PANTHER PTHR10342 231 565 2.8E-100 T 22-04-2016 LK04_RS05675 b6b1da4253bedc6aaca8b08829c1fb72 584 PANTHER PTHR10342:SF215 231 565 2.8E-100 T 22-04-2016 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 416 426 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site LK04_RS01315 ad2844102a0219105499a558327c7f73 482 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 2 197 1.1E-53 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 SUPERFAMILY SSF53613 211 476 5.09E-76 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS01315 ad2844102a0219105499a558327c7f73 482 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 212 481 22.848 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 PANTHER PTHR12592 1 482 8.6E-149 T 22-04-2016 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 Pfam PF03853 YjeF-related protein N-terminus 18 177 4.4E-44 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 1 198 21.291 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 217 477 2.0E-85 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 Pfam PF01256 Carbohydrate kinase 235 471 1.0E-71 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 PANTHER PTHR12592:SF0 1 482 8.6E-149 T 22-04-2016 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 PIRSF PIRSF017184 1 482 6.0E-152 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 Gene3D G3DSA:3.40.50.10260 1 218 8.5E-67 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LK04_RS01315 ad2844102a0219105499a558327c7f73 482 Gene3D G3DSA:3.40.1190.20 219 474 1.1E-90 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS01315 ad2844102a0219105499a558327c7f73 482 SUPERFAMILY SSF64153 1 234 1.44E-62 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LK04_RS03825 ccb6557876204b528b4585fc6dd425c1 80 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 4.0E-35 T 22-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 LK04_RS03825 ccb6557876204b528b4585fc6dd425c1 80 PANTHER PTHR34386:SF3 1 80 1.9E-35 T 22-04-2016 LK04_RS03825 ccb6557876204b528b4585fc6dd425c1 80 SUPERFAMILY SSF52833 1 71 6.84E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS03825 ccb6557876204b528b4585fc6dd425c1 80 Pfam PF00462 Glutaredoxin 3 61 3.8E-15 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LK04_RS03825 ccb6557876204b528b4585fc6dd425c1 80 Gene3D G3DSA:3.40.30.10 1 72 4.9E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS03825 ccb6557876204b528b4585fc6dd425c1 80 PANTHER PTHR34386 1 80 1.9E-35 T 22-04-2016 LK04_RS00325 09a37205ca64a399f825208737566073 249 SUPERFAMILY SSF53335 14 246 1.78E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS00325 09a37205ca64a399f825208737566073 249 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 38.716 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 LK04_RS00325 09a37205ca64a399f825208737566073 249 Gene3D G3DSA:3.40.50.150 57 246 6.2E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS00325 09a37205ca64a399f825208737566073 249 PANTHER PTHR36112 8 246 1.7E-141 T 22-04-2016 LK04_RS00325 09a37205ca64a399f825208737566073 249 PANTHER PTHR36112:SF1 8 246 1.7E-141 T 22-04-2016 LK04_RS00325 09a37205ca64a399f825208737566073 249 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 9.9E-110 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 LK04_RS00325 09a37205ca64a399f825208737566073 249 Gene3D G3DSA:3.40.1630.10 1 56 2.3E-27 T 22-04-2016 LK04_RS12920 77b62780310f12ffb8d23517cb851ed4 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 216 2.6E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12920 77b62780310f12ffb8d23517cb851ed4 230 SUPERFAMILY SSF161098 5 221 2.88E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12920 77b62780310f12ffb8d23517cb851ed4 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 220 7.9E-73 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 LK04_RS12920 77b62780310f12ffb8d23517cb851ed4 230 Gene3D G3DSA:1.10.3720.10 7 225 1.3E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12920 77b62780310f12ffb8d23517cb851ed4 230 PANTHER PTHR30183 1 227 3.3E-91 T 22-04-2016 LK04_RS14280 9acdb8420ce907ead6c5f330c8ae7b10 233 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 230 1.6E-72 T 22-04-2016 IPR018648 Protein of unknown function DUF2076 LK04_RS17300 0a8489d00486a4d907d607f7f5e7b92a 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 5.2E-113 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 LK04_RS17300 0a8489d00486a4d907d607f7f5e7b92a 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 3.0E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LK04_RS17300 0a8489d00486a4d907d607f7f5e7b92a 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 461 4.0E-173 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 LK04_RS17300 0a8489d00486a4d907d607f7f5e7b92a 468 SUPERFAMILY SSF48024 22 133 3.66E-38 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LK04_RS17300 0a8489d00486a4d907d607f7f5e7b92a 468 Gene3D G3DSA:3.40.50.300 190 461 1.4E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17300 0a8489d00486a4d907d607f7f5e7b92a 468 SMART SM00382 220 426 7.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS17300 0a8489d00486a4d907d607f7f5e7b92a 468 PANTHER PTHR30153 8 468 2.7E-221 T 22-04-2016 LK04_RS17300 0a8489d00486a4d907d607f7f5e7b92a 468 Gene3D G3DSA:1.10.860.10 24 126 1.9E-39 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LK04_RS17300 0a8489d00486a4d907d607f7f5e7b92a 468 SUPERFAMILY SSF52540 201 272 1.44E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17300 0a8489d00486a4d907d607f7f5e7b92a 468 SUPERFAMILY SSF52540 299 453 1.44E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14165 d30861d354f85e5e5c368db732584d31 400 SUPERFAMILY SSF53254 9 384 3.73E-60 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS14165 d30861d354f85e5e5c368db732584d31 400 Gene3D G3DSA:3.40.50.1240 122 247 2.4E-32 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS14165 d30861d354f85e5e5c368db732584d31 400 PANTHER PTHR41972 8 394 2.6E-68 T 22-04-2016 LK04_RS14165 d30861d354f85e5e5c368db732584d31 400 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 12 336 6.4E-29 T 22-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 LK04_RS14165 d30861d354f85e5e5c368db732584d31 400 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 13 27 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site LK04_RS14165 d30861d354f85e5e5c368db732584d31 400 Gene3D G3DSA:3.40.50.1240 250 393 9.8E-68 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS14165 d30861d354f85e5e5c368db732584d31 400 Gene3D G3DSA:3.40.50.1240 9 121 9.8E-68 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS19825 d485b82a37a6b99a1e26fe60a7d09a34 282 PANTHER PTHR13774:SF18 5 282 1.2E-87 T 22-04-2016 LK04_RS19825 d485b82a37a6b99a1e26fe60a7d09a34 282 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 281 1.0E-60 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LK04_RS19825 d485b82a37a6b99a1e26fe60a7d09a34 282 Pfam PF02567 Phenazine biosynthesis-like protein 8 278 2.7E-56 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LK04_RS19825 d485b82a37a6b99a1e26fe60a7d09a34 282 Gene3D G3DSA:3.10.310.10 1 126 1.2E-44 T 22-04-2016 LK04_RS19825 d485b82a37a6b99a1e26fe60a7d09a34 282 PIRSF PIRSF016184 1 282 2.0E-73 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LK04_RS19825 d485b82a37a6b99a1e26fe60a7d09a34 282 SUPERFAMILY SSF54506 1 281 5.11E-72 T 22-04-2016 LK04_RS19825 d485b82a37a6b99a1e26fe60a7d09a34 282 Gene3D G3DSA:3.10.310.10 127 271 8.9E-35 T 22-04-2016 LK04_RS19825 d485b82a37a6b99a1e26fe60a7d09a34 282 PANTHER PTHR13774 5 282 1.2E-87 T 22-04-2016 LK04_RS15035 9d14a5e672f704e2abc22eecdeafbc26 232 PANTHER PTHR21234 1 229 5.0E-59 T 22-04-2016 IPR018017 Nucleoside phosphorylase LK04_RS15035 9d14a5e672f704e2abc22eecdeafbc26 232 Pfam PF01048 Phosphorylase superfamily 3 226 1.4E-47 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS15035 9d14a5e672f704e2abc22eecdeafbc26 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 228 9.8E-122 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 LK04_RS15035 9d14a5e672f704e2abc22eecdeafbc26 232 Gene3D G3DSA:3.40.50.1580 1 229 6.0E-75 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS15035 9d14a5e672f704e2abc22eecdeafbc26 232 SUPERFAMILY SSF53167 1 229 4.71E-74 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS15035 9d14a5e672f704e2abc22eecdeafbc26 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.304 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 LK04_RS02230 24d8ec79d167f9a08a54334108900d09 169 Gene3D G3DSA:1.20.1260.10 1 161 3.6E-60 T 22-04-2016 IPR012347 Ferritin-related LK04_RS02230 24d8ec79d167f9a08a54334108900d09 169 SUPERFAMILY SSF47240 1 159 1.78E-55 T 22-04-2016 IPR009078 Ferritin-like superfamily LK04_RS02230 24d8ec79d167f9a08a54334108900d09 169 PANTHER PTHR11431:SF4 3 164 6.6E-47 T 22-04-2016 LK04_RS02230 24d8ec79d167f9a08a54334108900d09 169 Pfam PF00210 Ferritin-like domain 9 143 2.1E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LK04_RS02230 24d8ec79d167f9a08a54334108900d09 169 PANTHER PTHR11431 3 164 6.6E-47 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 Pfam PF08220 DeoR-like helix-turn-helix domain 30 82 3.2E-10 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 ProSitePatterns PS00894 DeoR-type HTH domain signature. 30 64 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 Gene3D G3DSA:1.10.10.10 27 77 8.4E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 PANTHER PTHR30363 24 283 1.8E-55 T 22-04-2016 LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 Gene3D G3DSA:3.40.50.1360 99 240 2.1E-8 T 22-04-2016 LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 SMART SM00420 30 82 1.6E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 SUPERFAMILY SSF100950 98 256 1.47E-24 T 22-04-2016 LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 SMART SM01134 97 257 2.3E-59 T 22-04-2016 LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 Pfam PF00455 DeoR C terminal sensor domain 99 255 1.0E-46 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 SUPERFAMILY SSF46785 30 87 6.13E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08970 b522e6ae7cf6db3b39e38810cfa81a30 288 PANTHER PTHR30363:SF1 24 283 1.8E-55 T 22-04-2016 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 PRINTS PR00123 ATP synthase A subunit signature 204 226 1.2E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 PRINTS PR00123 ATP synthase A subunit signature 105 121 1.2E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 PRINTS PR00123 ATP synthase A subunit signature 252 267 1.2E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 PANTHER PTHR11410:SF7 139 272 3.1E-111 T 22-04-2016 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 PANTHER PTHR11410:SF7 1 123 3.1E-111 T 22-04-2016 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 39 267 2.4E-41 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 Gene3D G3DSA:1.20.120.220 97 272 6.1E-57 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 SUPERFAMILY SSF81336 96 266 2.35E-48 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 ProSitePatterns PS00449 ATP synthase a subunit signature. 207 216 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site LK04_RS19035 8496320198712f8ec7713170dba3d259 272 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 272 16.009 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 PANTHER PTHR11410 139 272 3.1E-111 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 PANTHER PTHR11410 1 123 3.1E-111 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LK04_RS19035 8496320198712f8ec7713170dba3d259 272 Pfam PF00119 ATP synthase A chain 47 266 7.7E-56 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LK04_RS15920 f39e5499c549a9239bf3a842968d17cf 441 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 20 418 9.4E-97 T 22-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 LK04_RS15920 f39e5499c549a9239bf3a842968d17cf 441 SUPERFAMILY SSF103473 21 170 7.19E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS15920 f39e5499c549a9239bf3a842968d17cf 441 SUPERFAMILY SSF103473 202 427 7.19E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS15920 f39e5499c549a9239bf3a842968d17cf 441 Gene3D G3DSA:1.20.1250.20 248 427 7.0E-10 T 22-04-2016 LK04_RS15920 f39e5499c549a9239bf3a842968d17cf 441 Gene3D G3DSA:1.20.1250.20 22 229 3.5E-12 T 22-04-2016 LK04_RS15920 f39e5499c549a9239bf3a842968d17cf 441 Pfam PF07690 Major Facilitator Superfamily 44 368 9.1E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS15920 f39e5499c549a9239bf3a842968d17cf 441 PANTHER PTHR23514:SF11 197 440 8.0E-186 T 22-04-2016 LK04_RS15920 f39e5499c549a9239bf3a842968d17cf 441 PANTHER PTHR23514:SF11 4 179 8.0E-186 T 22-04-2016 LK04_RS15920 f39e5499c549a9239bf3a842968d17cf 441 PANTHER PTHR23514 197 440 8.0E-186 T 22-04-2016 LK04_RS15920 f39e5499c549a9239bf3a842968d17cf 441 PANTHER PTHR23514 4 179 8.0E-186 T 22-04-2016 LK04_RS00425 e6dbcc58cd7ca4a673f3873a738e5cfb 549 SUPERFAMILY SSF161098 286 546 3.36E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00425 e6dbcc58cd7ca4a673f3873a738e5cfb 549 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 364 544 3.5E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00425 e6dbcc58cd7ca4a673f3873a738e5cfb 549 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 259 9.0E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00425 e6dbcc58cd7ca4a673f3873a738e5cfb 549 Gene3D G3DSA:1.10.3720.10 3 265 2.5E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00425 e6dbcc58cd7ca4a673f3873a738e5cfb 549 Gene3D G3DSA:1.10.3720.10 292 547 3.6E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00425 e6dbcc58cd7ca4a673f3873a738e5cfb 549 PANTHER PTHR30183 1 549 5.2E-42 T 22-04-2016 LK04_RS00425 e6dbcc58cd7ca4a673f3873a738e5cfb 549 SUPERFAMILY SSF161098 4 264 3.38E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 SUPERFAMILY SSF51905 3 216 1.85E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 SUPERFAMILY SSF51905 313 370 1.85E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 SUPERFAMILY SSF54373 212 313 1.37E-18 T 22-04-2016 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 74.195 T 22-04-2016 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 PANTHER PTHR10961:SF7 1 371 7.2E-114 T 22-04-2016 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 PANTHER PTHR10961 1 371 7.2E-114 T 22-04-2016 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 Gene3D G3DSA:3.50.50.60 2 57 9.5E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 Gene3D G3DSA:3.50.50.60 316 370 9.5E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 Gene3D G3DSA:3.50.50.60 146 208 9.5E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 Pfam PF01266 FAD dependent oxidoreductase 4 351 1.3E-44 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 Gene3D G3DSA:3.30.9.10 60 145 1.9E-56 T 22-04-2016 LK04_RS11475 013bd84223a63f1677de016ed19904dd 371 Gene3D G3DSA:3.30.9.10 211 313 1.9E-56 T 22-04-2016 LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 SUPERFAMILY SSF51735 8 251 2.82E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 250 6.5E-64 T 22-04-2016 LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PANTHER PTHR24322:SF459 14 142 1.8E-59 T 22-04-2016 LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PANTHER PTHR24322:SF459 158 190 1.8E-59 T 22-04-2016 LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 Gene3D G3DSA:3.40.50.720 4 252 1.2E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 189 0.0049 T 22-04-2016 LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.6E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 6.6E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.6E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.6E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.6E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 6.6E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.5E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 7.5E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 7.5E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PANTHER PTHR24322 14 142 1.8E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01735 5ac2ff4a143691d12d01f1b3a154b8b7 254 PANTHER PTHR24322 158 190 1.8E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 SUPERFAMILY SSF46785 2 137 8.91E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 38.96 T 22-04-2016 IPR023071 Transcriptional regulator, SlyA LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 PANTHER PTHR33164:SF16 5 144 3.0E-25 T 22-04-2016 LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 PANTHER PTHR33164 5 144 3.0E-25 T 22-04-2016 LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 SMART SM00347 22 123 2.7E-29 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 Pfam PF01047 MarR family 29 87 4.5E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 Gene3D G3DSA:1.10.10.10 3 137 1.9E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 8.9E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 8.9E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 8.9E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 8.9E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS10210 507089e642fb4c2d2d8b583f742c4f0f 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PANTHER PTHR30033 1 548 1.1E-105 T 22-04-2016 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 347 8.1E-71 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 492 544 1.7E-7 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 SUPERFAMILY SSF64518 134 545 1.7E-45 T 22-04-2016 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PANTHER PTHR30033:SF1 1 548 1.1E-105 T 22-04-2016 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 Pfam PF00460 Flagella basal body rod protein 5 34 1.2E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PRINTS PR01005 Flagellar hook-associated protein signature 441 460 1.2E-82 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 1.2E-82 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PRINTS PR01005 Flagellar hook-associated protein signature 357 379 1.2E-82 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PRINTS PR01005 Flagellar hook-associated protein signature 257 279 1.2E-82 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PRINTS PR01005 Flagellar hook-associated protein signature 466 487 1.2E-82 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PRINTS PR01005 Flagellar hook-associated protein signature 513 537 1.2E-82 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 1.2E-82 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 1.2E-82 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LK04_RS11355 2b806375a6a3be5e982ad13388d2d9d2 548 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 1.2E-82 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LK04_RS12775 5ff031acd13745ea16954b651a9b5dd8 306 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 53 278 3.9E-113 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 LK04_RS12775 5ff031acd13745ea16954b651a9b5dd8 306 PIRSF PIRSF028756 17 306 3.5E-133 T 22-04-2016 IPR016898 Polyphosphate kinase 2 LK04_RS12775 5ff031acd13745ea16954b651a9b5dd8 306 Gene3D G3DSA:3.40.50.300 49 292 1.6E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12775 5ff031acd13745ea16954b651a9b5dd8 306 PANTHER PTHR34383:SF1 16 306 5.5E-192 T 22-04-2016 LK04_RS12775 5ff031acd13745ea16954b651a9b5dd8 306 PANTHER PTHR34383 16 306 5.5E-192 T 22-04-2016 LK04_RS12775 5ff031acd13745ea16954b651a9b5dd8 306 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 53 277 2.4E-112 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related LK04_RS12775 5ff031acd13745ea16954b651a9b5dd8 306 SUPERFAMILY SSF52540 82 271 1.05E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13020 56012123c92038eabe9a4da97e9061e9 269 SUPERFAMILY SSF48452 147 262 3.48E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS13020 56012123c92038eabe9a4da97e9061e9 269 Gene3D G3DSA:1.25.40.10 143 260 2.1E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS13020 56012123c92038eabe9a4da97e9061e9 269 PANTHER PTHR26312:SF74 160 266 2.1E-38 T 22-04-2016 LK04_RS13020 56012123c92038eabe9a4da97e9061e9 269 PANTHER PTHR26312 160 266 2.1E-38 T 22-04-2016 LK04_RS13020 56012123c92038eabe9a4da97e9061e9 269 Pfam PF13525 Outer membrane lipoprotein 157 267 3.2E-8 T 22-04-2016 LK04_RS13020 56012123c92038eabe9a4da97e9061e9 269 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 149 266 4.4E-42 T 22-04-2016 IPR014162 Tol-Pal system, YbgF LK04_RS13020 56012123c92038eabe9a4da97e9061e9 269 Pfam PF16331 TolA binding protein trimerisation 37 110 6.0E-25 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 LK04_RS18580 c4e14271de9dd4f483d2320b897753cd 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 124 284 2.1E-36 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS18580 c4e14271de9dd4f483d2320b897753cd 323 PANTHER PTHR10996:SF130 71 318 3.0E-49 T 22-04-2016 LK04_RS18580 c4e14271de9dd4f483d2320b897753cd 323 Gene3D G3DSA:3.40.50.720 123 285 5.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18580 c4e14271de9dd4f483d2320b897753cd 323 SUPERFAMILY SSF51735 108 284 1.1E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18580 c4e14271de9dd4f483d2320b897753cd 323 Gene3D G3DSA:3.40.50.720 28 122 1.6E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18580 c4e14271de9dd4f483d2320b897753cd 323 PANTHER PTHR10996 71 318 3.0E-49 T 22-04-2016 LK04_RS05040 8200693b3ba266753da677612c124bdc 155 Pfam PF05119 Phage terminase, small subunit 46 143 1.0E-23 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family LK04_RS05040 8200693b3ba266753da677612c124bdc 155 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 37 153 3.9E-23 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family LK04_RS13920 402f66adc83a0b3135869eb87bbd5b9d 589 PANTHER PTHR24221 2 580 2.3E-194 T 22-04-2016 LK04_RS13920 402f66adc83a0b3135869eb87bbd5b9d 589 Pfam PF00005 ABC transporter 352 500 6.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS13920 402f66adc83a0b3135869eb87bbd5b9d 589 SUPERFAMILY SSF90123 7 322 3.79E-70 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS13920 402f66adc83a0b3135869eb87bbd5b9d 589 Gene3D G3DSA:1.20.1560.10 7 322 1.6E-67 T 22-04-2016 LK04_RS13920 402f66adc83a0b3135869eb87bbd5b9d 589 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS13920 402f66adc83a0b3135869eb87bbd5b9d 589 Pfam PF00664 ABC transporter transmembrane region 23 291 2.9E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS13920 402f66adc83a0b3135869eb87bbd5b9d 589 Gene3D G3DSA:3.40.50.300 341 565 4.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13920 402f66adc83a0b3135869eb87bbd5b9d 589 SUPERFAMILY SSF52540 333 572 3.91E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13920 402f66adc83a0b3135869eb87bbd5b9d 589 SMART SM00382 361 547 1.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS19075 b4beb9805d2764bc48aef89b224a5981 498 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 4.4E-24 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 LK04_RS19075 b4beb9805d2764bc48aef89b224a5981 498 SUPERFAMILY SSF52540 11 262 9.58E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19075 b4beb9805d2764bc48aef89b224a5981 498 Gene3D G3DSA:3.40.50.300 25 183 8.8E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19075 b4beb9805d2764bc48aef89b224a5981 498 PANTHER PTHR32204 7 493 9.5E-134 T 22-04-2016 LK04_RS19075 b4beb9805d2764bc48aef89b224a5981 498 Pfam PF12592 Protein of unknown function (DUF3763) 444 497 1.5E-22 T 22-04-2016 IPR022547 ATPase, RavA, C-terminal GO:0016820 LK04_RS19075 b4beb9805d2764bc48aef89b224a5981 498 SMART SM00382 38 187 2.8E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS11560 f7491bca14a8fa77d82590a8116196fb 385 PANTHER PTHR11712 134 380 2.3E-59 T 22-04-2016 LK04_RS11560 f7491bca14a8fa77d82590a8116196fb 385 SUPERFAMILY SSF53901 3 224 1.18E-36 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11560 f7491bca14a8fa77d82590a8116196fb 385 SUPERFAMILY SSF53901 197 383 3.34E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11560 f7491bca14a8fa77d82590a8116196fb 385 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 83 224 9.0E-21 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal LK04_RS11560 f7491bca14a8fa77d82590a8116196fb 385 Gene3D G3DSA:3.40.47.10 4 225 8.5E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11560 f7491bca14a8fa77d82590a8116196fb 385 SMART SM00825 Beta-ketoacyl synthase 68 385 7.0E-11 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LK04_RS11560 f7491bca14a8fa77d82590a8116196fb 385 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 231 331 3.0E-27 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal LK04_RS11560 f7491bca14a8fa77d82590a8116196fb 385 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 142 158 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site LK04_RS11560 f7491bca14a8fa77d82590a8116196fb 385 Gene3D G3DSA:3.40.47.10 236 382 3.4E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS00445 d9983e2ea520e8fca921242777af5dc5 271 Gene3D G3DSA:3.20.20.150 1 271 3.2E-85 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS00445 d9983e2ea520e8fca921242777af5dc5 271 Pfam PF01261 Xylose isomerase-like TIM barrel 24 202 8.8E-16 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS00445 d9983e2ea520e8fca921242777af5dc5 271 PANTHER PTHR12110 1 270 4.7E-58 T 22-04-2016 LK04_RS00445 d9983e2ea520e8fca921242777af5dc5 271 PANTHER PTHR12110:SF3 1 270 4.7E-58 T 22-04-2016 LK04_RS00445 d9983e2ea520e8fca921242777af5dc5 271 PIRSF PIRSF036778 1 271 3.8E-94 T 22-04-2016 IPR014621 Uncharacterised conserved protein UCP036778, sugar epimerase-type LK04_RS00445 d9983e2ea520e8fca921242777af5dc5 271 SUPERFAMILY SSF51658 3 269 2.21E-63 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS00580 c7511960748e0c23b601daf6afd8ee3c 290 PANTHER PTHR30111:SF1 1 286 2.3E-80 T 22-04-2016 LK04_RS00580 c7511960748e0c23b601daf6afd8ee3c 290 SUPERFAMILY SSF64397 5 230 1.03E-71 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 LK04_RS00580 c7511960748e0c23b601daf6afd8ee3c 290 Gene3D G3DSA:1.10.287.480 176 223 4.6E-24 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain LK04_RS00580 c7511960748e0c23b601daf6afd8ee3c 290 Gene3D G3DSA:3.55.30.10 2 174 1.3E-62 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 LK04_RS00580 c7511960748e0c23b601daf6afd8ee3c 290 Pfam PF01430 Hsp33 protein 5 271 8.0E-84 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LK04_RS00580 c7511960748e0c23b601daf6afd8ee3c 290 PIRSF PIRSF005261 1 282 2.2E-75 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LK04_RS00580 c7511960748e0c23b601daf6afd8ee3c 290 SUPERFAMILY SSF118352 223 279 1.96E-19 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 LK04_RS00580 c7511960748e0c23b601daf6afd8ee3c 290 PANTHER PTHR30111 1 286 2.3E-80 T 22-04-2016 LK04_RS00580 c7511960748e0c23b601daf6afd8ee3c 290 Gene3D G3DSA:3.90.1280.10 224 280 2.6E-24 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 LK04_RS00580 c7511960748e0c23b601daf6afd8ee3c 290 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 282 32.241 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 Gene3D G3DSA:3.40.720.10 43 467 1.8E-138 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 PANTHER PTHR11596 314 467 3.0E-142 T 22-04-2016 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 PANTHER PTHR11596 42 291 3.0E-142 T 22-04-2016 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 Pfam PF00245 Alkaline phosphatase 61 427 9.6E-121 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 SMART SM00098 62 468 1.3E-188 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 ProSitePatterns PS00123 Alkaline phosphatase active site. 118 126 - T 22-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 PANTHER PTHR11596:SF5 314 467 3.0E-142 T 22-04-2016 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 PANTHER PTHR11596:SF5 42 291 3.0E-142 T 22-04-2016 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 PRINTS PR00113 Alkaline phosphatase signature 218 228 1.4E-48 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 PRINTS PR00113 Alkaline phosphatase signature 118 133 1.4E-48 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 PRINTS PR00113 Alkaline phosphatase signature 317 346 1.4E-48 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 PRINTS PR00113 Alkaline phosphatase signature 155 175 1.4E-48 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 PRINTS PR00113 Alkaline phosphatase signature 61 81 1.4E-48 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 LK04_RS07160 a611b38c3a4dede749df18c4d214d453 468 SUPERFAMILY SSF53649 36 467 7.12E-135 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LK04_RS12835 f0feccc289ccf631b0499fc139dd0f8c 150 PANTHER PTHR23404 2 150 8.1E-47 T 22-04-2016 LK04_RS12835 f0feccc289ccf631b0499fc139dd0f8c 150 Pfam PF02391 MoaE protein 10 120 1.1E-38 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12835 f0feccc289ccf631b0499fc139dd0f8c 150 Gene3D G3DSA:3.90.1170.40 2 149 3.1E-59 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12835 f0feccc289ccf631b0499fc139dd0f8c 150 PANTHER PTHR23404:SF2 2 150 8.1E-47 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12835 f0feccc289ccf631b0499fc139dd0f8c 150 SUPERFAMILY SSF54690 4 149 6.8E-56 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS11755 8f17728bbbcd83d9d56cd40f8a987265 441 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 348 368 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LK04_RS11755 8f17728bbbcd83d9d56cd40f8a987265 441 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 28 424 1.9E-110 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LK04_RS11755 8f17728bbbcd83d9d56cd40f8a987265 441 PANTHER PTHR11119:SF49 1 428 1.7E-182 T 22-04-2016 LK04_RS11755 8f17728bbbcd83d9d56cd40f8a987265 441 TIGRFAM TIGR03616 RutG: pyrimidine utilization transport protein G 1 428 1.8E-235 T 22-04-2016 IPR019918 Pyrimidine permease RutG, predicted GO:0006864|GO:0015218 LK04_RS11755 8f17728bbbcd83d9d56cd40f8a987265 441 Pfam PF00860 Permease family 30 399 9.0E-98 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS11755 8f17728bbbcd83d9d56cd40f8a987265 441 PANTHER PTHR11119 1 428 1.7E-182 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 Gene3D G3DSA:3.90.190.20 313 450 3.3E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 Pfam PF01225 Mur ligase family, catalytic domain 24 71 2.0E-8 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 Gene3D G3DSA:3.40.1190.10 82 311 6.2E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 Pfam PF08245 Mur ligase middle domain 106 294 7.5E-44 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 PANTHER PTHR23135:SF3 12 449 2.3E-160 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 SUPERFAMILY SSF53244 314 447 1.07E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 Gene3D G3DSA:3.40.1390.10 1 80 2.5E-27 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 SUPERFAMILY SSF63418 1 97 1.44E-27 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 448 33.91 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 447 2.8E-140 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 PANTHER PTHR23135 12 449 2.3E-160 T 22-04-2016 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 SUPERFAMILY SSF53623 100 313 1.44E-56 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15425 8b2f29e1d9319f21d2b8901bbaecd5ec 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 392 7.1E-15 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS06415 0512438ea05329e1305490d4216497de 534 Gene3D G3DSA:3.40.50.300 280 521 3.9E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06415 0512438ea05329e1305490d4216497de 534 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06415 0512438ea05329e1305490d4216497de 534 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06415 0512438ea05329e1305490d4216497de 534 PANTHER PTHR24220:SF574 7 405 2.9E-126 T 22-04-2016 LK04_RS06415 0512438ea05329e1305490d4216497de 534 SUPERFAMILY SSF52540 3 256 2.39E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06415 0512438ea05329e1305490d4216497de 534 Gene3D G3DSA:3.40.50.300 2 255 7.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06415 0512438ea05329e1305490d4216497de 534 Pfam PF00005 ABC transporter 297 447 1.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06415 0512438ea05329e1305490d4216497de 534 Pfam PF00005 ABC transporter 21 177 8.9E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06415 0512438ea05329e1305490d4216497de 534 SUPERFAMILY SSF52540 282 519 3.28E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06415 0512438ea05329e1305490d4216497de 534 SMART SM00382 306 497 2.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06415 0512438ea05329e1305490d4216497de 534 SMART SM00382 30 226 1.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06415 0512438ea05329e1305490d4216497de 534 PANTHER PTHR24220 7 405 2.9E-126 T 22-04-2016 LK04_RS06415 0512438ea05329e1305490d4216497de 534 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 499 526 7.7E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS06415 0512438ea05329e1305490d4216497de 534 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 228 258 0.038 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS05310 51e53fb1a71f1290198d8a28405adaee 406 PANTHER PTHR11712 1 405 3.9E-163 T 22-04-2016 LK04_RS05310 51e53fb1a71f1290198d8a28405adaee 406 Gene3D G3DSA:3.40.47.10 263 404 2.7E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS05310 51e53fb1a71f1290198d8a28405adaee 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site LK04_RS05310 51e53fb1a71f1290198d8a28405adaee 406 SUPERFAMILY SSF53901 1 253 1.0E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS05310 51e53fb1a71f1290198d8a28405adaee 406 SUPERFAMILY SSF53901 215 403 3.65E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS05310 51e53fb1a71f1290198d8a28405adaee 406 Gene3D G3DSA:3.40.47.10 6 259 1.1E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS05310 51e53fb1a71f1290198d8a28405adaee 406 SMART SM00825 Beta-ketoacyl synthase 4 406 5.7E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LK04_RS05310 51e53fb1a71f1290198d8a28405adaee 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 246 1.4E-39 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal LK04_RS05310 51e53fb1a71f1290198d8a28405adaee 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 1.5E-29 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Gene3D G3DSA:3.30.470.20 203 444 1.3E-84 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 SUPERFAMILY SSF52440 1 112 1.29E-43 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 SUPERFAMILY SSF51246 331 445 6.28E-31 T 22-04-2016 IPR011054 Rudiment single hybrid motif LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Gene3D G3DSA:3.30.1360.40 800 879 1.4E-23 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Gene3D G3DSA:2.40.100.10 915 1052 2.5E-45 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Gene3D G3DSA:2.40.100.10 628 760 9.9E-31 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 SUPERFAMILY SSF51230 1119 1195 1.96E-18 T 22-04-2016 IPR011053 Single hybrid motif LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 SMART SM00878 336 445 1.8E-42 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 PANTHER PTHR18866:SF91 1 546 4.0E-258 T 22-04-2016 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 PANTHER PTHR18866:SF91 1102 1196 4.0E-258 T 22-04-2016 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Pfam PF00364 Biotin-requiring enzyme 1133 1194 2.3E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 SUPERFAMILY SSF50891 628 752 6.07E-31 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 453 768 2.7E-88 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Gene3D G3DSA:2.40.50.100 1125 1195 2.4E-20 T 22-04-2016 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Gene3D G3DSA:3.40.50.20 1 128 7.1E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 SMART SM00797 476 764 3.4E-159 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Pfam PF02682 Allophanate hydrolase subunit 1 800 1022 1.3E-47 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 PANTHER PTHR18866 1 546 4.0E-258 T 22-04-2016 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 PANTHER PTHR18866 1102 1196 4.0E-258 T 22-04-2016 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 SUPERFAMILY SSF50891 915 1045 1.63E-25 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 317 8.4E-61 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Gene3D G3DSA:3.30.1490.20 129 201 8.0E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.3E-41 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Pfam PF02785 Biotin carboxylase C-terminal domain 336 444 8.0E-30 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 SUPERFAMILY SSF160467 800 891 4.32E-18 T 22-04-2016 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 3 1194 0.0 T 22-04-2016 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703|UniPathway: UPA00258|UniPathway: UPA00258 LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 SMART SM00796 798 1029 2.2E-109 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 Pfam PF02626 Allophanate hydrolase subunit 2 477 746 1.1E-85 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS18390 31a1ab2c032236ad7dc9860c6798a6ef 1199 SUPERFAMILY SSF56059 83 351 4.07E-61 T 22-04-2016 LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 SMART SM00382 28 180 3.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 PANTHER PTHR32071:SF38 1 332 7.0E-222 T 22-04-2016 LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 SUPERFAMILY SSF52540 8 240 1.23E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 PANTHER PTHR32071 1 332 7.0E-222 T 22-04-2016 LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 Gene3D G3DSA:1.10.10.60 279 326 8.1E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 Gene3D G3DSA:1.10.8.60 180 241 3.9E-22 T 22-04-2016 LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 290 307 2.0E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 307 327 2.0E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 Pfam PF00158 Sigma-54 interaction domain 8 170 2.5E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 Gene3D G3DSA:3.40.50.300 6 179 1.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 SUPERFAMILY SSF46689 276 326 1.43E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 Pfam PF02954 Bacterial regulatory protein, Fis family 287 324 2.3E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS08390 386fbc25a961bccce71c0cf655011866 332 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 324 4.5E-158 T 22-04-2016 IPR014317 Transcription activator PspF LK04_RS10860 94b6baaa8e4e5ae18c387cf830a0e88f 346 Gene3D G3DSA:3.90.180.10 3 173 1.4E-44 T 22-04-2016 IPR011032 GroES-like LK04_RS10860 94b6baaa8e4e5ae18c387cf830a0e88f 346 PANTHER PTHR11695:SF523 16 346 9.7E-103 T 22-04-2016 LK04_RS10860 94b6baaa8e4e5ae18c387cf830a0e88f 346 Gene3D G3DSA:3.40.50.720 174 293 7.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10860 94b6baaa8e4e5ae18c387cf830a0e88f 346 SUPERFAMILY SSF51735 152 315 3.82E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10860 94b6baaa8e4e5ae18c387cf830a0e88f 346 Pfam PF00107 Zinc-binding dehydrogenase 182 307 5.8E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS10860 94b6baaa8e4e5ae18c387cf830a0e88f 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 141 2.9E-30 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS10860 94b6baaa8e4e5ae18c387cf830a0e88f 346 SUPERFAMILY SSF50129 4 181 5.19E-43 T 22-04-2016 IPR011032 GroES-like LK04_RS10860 94b6baaa8e4e5ae18c387cf830a0e88f 346 SMART SM00829 13 344 0.0059 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS10860 94b6baaa8e4e5ae18c387cf830a0e88f 346 PANTHER PTHR11695 16 346 9.7E-103 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS05415 6add58b56a941c04bd15132d8a2a681f 315 PANTHER PTHR34294 1 315 7.8E-110 T 22-04-2016 LK04_RS05415 6add58b56a941c04bd15132d8a2a681f 315 SUPERFAMILY SSF100950 58 314 5.3E-59 T 22-04-2016 LK04_RS05415 6add58b56a941c04bd15132d8a2a681f 315 PANTHER PTHR34294:SF2 1 315 7.8E-110 T 22-04-2016 LK04_RS05415 6add58b56a941c04bd15132d8a2a681f 315 Pfam PF04198 Putative sugar-binding domain 58 314 2.1E-65 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 LK04_RS05415 6add58b56a941c04bd15132d8a2a681f 315 Gene3D G3DSA:1.10.10.10 22 55 2.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05415 6add58b56a941c04bd15132d8a2a681f 315 Pfam PF13384 Homeodomain-like domain 9 50 4.3E-6 T 22-04-2016 LK04_RS05415 6add58b56a941c04bd15132d8a2a681f 315 Gene3D G3DSA:3.40.50.1360 56 313 3.6E-67 T 22-04-2016 LK04_RS13360 32c60ea1f3b27bc3546531354a9f2b55 343 PANTHER PTHR34388 1 342 4.5E-88 T 22-04-2016 LK04_RS13360 32c60ea1f3b27bc3546531354a9f2b55 343 Gene3D G3DSA:1.20.272.20 223 336 5.0E-47 T 22-04-2016 LK04_RS13360 32c60ea1f3b27bc3546531354a9f2b55 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 336 4.9E-50 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS13360 32c60ea1f3b27bc3546531354a9f2b55 343 SUPERFAMILY SSF52540 1 210 2.99E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13360 32c60ea1f3b27bc3546531354a9f2b55 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 2.5E-103 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 LK04_RS13360 32c60ea1f3b27bc3546531354a9f2b55 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 1.7E-42 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 LK04_RS13360 32c60ea1f3b27bc3546531354a9f2b55 343 Gene3D G3DSA:3.40.50.300 1 140 1.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13360 32c60ea1f3b27bc3546531354a9f2b55 343 SUPERFAMILY SSF48019 212 334 3.23E-33 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 LK04_RS13360 32c60ea1f3b27bc3546531354a9f2b55 343 Gene3D G3DSA:1.10.8.60 143 222 2.0E-39 T 22-04-2016 LK04_RS08370 2340c81a65d7fa148da73a700ab49b2b 296 PANTHER PTHR30465:SF49 7 296 3.4E-170 T 22-04-2016 LK04_RS08370 2340c81a65d7fa148da73a700ab49b2b 296 SUPERFAMILY SSF161098 90 277 2.22E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08370 2340c81a65d7fa148da73a700ab49b2b 296 PANTHER PTHR30465 7 296 3.4E-170 T 22-04-2016 LK04_RS08370 2340c81a65d7fa148da73a700ab49b2b 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 5.2E-9 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS08370 2340c81a65d7fa148da73a700ab49b2b 296 Gene3D G3DSA:1.10.3720.10 86 291 7.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08370 2340c81a65d7fa148da73a700ab49b2b 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 293 1.6E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00590 89a548bb68d156584aa43f2a5ea5f412 219 PANTHER PTHR18901:SF7 1 219 1.5E-112 T 22-04-2016 LK04_RS00590 89a548bb68d156584aa43f2a5ea5f412 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 8.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00590 89a548bb68d156584aa43f2a5ea5f412 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 8.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00590 89a548bb68d156584aa43f2a5ea5f412 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 8.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00590 89a548bb68d156584aa43f2a5ea5f412 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 8.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00590 89a548bb68d156584aa43f2a5ea5f412 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 186 4.0E-10 T 22-04-2016 IPR023214 HAD-like domain LK04_RS00590 89a548bb68d156584aa43f2a5ea5f412 219 PANTHER PTHR18901 1 219 1.5E-112 T 22-04-2016 LK04_RS00590 89a548bb68d156584aa43f2a5ea5f412 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 10 188 1.5E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS00590 89a548bb68d156584aa43f2a5ea5f412 219 SUPERFAMILY SSF56784 1 214 2.57E-45 T 22-04-2016 IPR023214 HAD-like domain LK04_RS00590 89a548bb68d156584aa43f2a5ea5f412 219 Gene3D G3DSA:3.40.50.1000 6 210 5.5E-26 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 Gene3D G3DSA:3.40.50.300 206 344 1.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 SUPERFAMILY SSF47819 531 606 5.23E-26 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 Gene3D G3DSA:3.40.50.300 14 203 1.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 Gene3D G3DSA:1.10.150.80 531 605 1.0E-22 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 3.1E-197 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 Pfam PF00570 HRDC domain 535 599 1.2E-22 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 SUPERFAMILY SSF52540 14 199 1.09E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 SUPERFAMILY SSF52540 208 454 3.72E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 SMART SM00490 250 331 2.2E-28 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 Pfam PF16124 RecQ zinc-binding 343 404 5.8E-15 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 Pfam PF09382 RQC domain 406 514 8.1E-37 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 PANTHER PTHR13710 13 607 2.7E-303 T 22-04-2016 LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 Pfam PF00271 Helicase conserved C-terminal domain 226 331 1.1E-19 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 SMART SM00487 22 218 7.9E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 SMART SM00956 411 514 2.8E-51 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 SMART SM00341 530 607 2.1E-24 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 Gene3D G3DSA:1.10.10.10 345 515 1.2E-58 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 603 3.2E-268 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 Pfam PF00270 DEAD/DEAH box helicase 28 187 6.7E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS18025 f912861f4407723ec28dcaae6938984a 607 PANTHER PTHR13710:SF81 13 607 2.7E-303 T 22-04-2016 LK04_RS08435 aefa679a0a02bbe2e27b5ccd859ef205 328 Gene3D G3DSA:3.20.20.120 117 319 9.0E-61 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS08435 aefa679a0a02bbe2e27b5ccd859ef205 328 SMART SM00922 130 223 2.5E-19 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LK04_RS08435 aefa679a0a02bbe2e27b5ccd859ef205 328 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LK04_RS08435 aefa679a0a02bbe2e27b5ccd859ef205 328 PANTHER PTHR13794:SF60 4 322 6.5E-130 T 22-04-2016 LK04_RS08435 aefa679a0a02bbe2e27b5ccd859ef205 328 SUPERFAMILY SSF54826 3 109 2.95E-29 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS08435 aefa679a0a02bbe2e27b5ccd859ef205 328 Pfam PF13378 Enolase C-terminal domain-like 133 317 4.4E-26 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS08435 aefa679a0a02bbe2e27b5ccd859ef205 328 PANTHER PTHR13794 4 322 6.5E-130 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS08435 aefa679a0a02bbe2e27b5ccd859ef205 328 Gene3D G3DSA:3.30.390.10 1 101 1.5E-43 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS08435 aefa679a0a02bbe2e27b5ccd859ef205 328 SUPERFAMILY SSF51604 116 319 1.83E-52 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS08435 aefa679a0a02bbe2e27b5ccd859ef205 328 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 110 1.0E-20 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 SUPERFAMILY SSF46689 218 266 7.62E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 SMART SM00342 233 316 1.0E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 Gene3D G3DSA:1.10.10.60 272 320 4.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 PANTHER PTHR11019:SF58 77 324 3.4E-77 T 22-04-2016 LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 Gene3D G3DSA:3.40.50.880 3 222 2.2E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 SUPERFAMILY SSF46689 270 320 3.23E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 Gene3D G3DSA:1.10.10.60 223 270 2.6E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 SUPERFAMILY SSF52317 1 199 1.5E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 Pfam PF12833 Helix-turn-helix domain 239 318 1.6E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 PANTHER PTHR11019 77 324 3.4E-77 T 22-04-2016 LK04_RS07170 017bb3e38ee0b2ffb1518392cad16f46 325 Pfam PF01965 DJ-1/PfpI family 39 179 9.3E-20 T 22-04-2016 IPR002818 DJ-1/PfpI LK04_RS00840 d96579f9635becf4da738933759b62af 156 PANTHER PTHR11205 1 156 1.1E-95 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 LK04_RS00840 d96579f9635becf4da738933759b62af 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.283 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 LK04_RS00840 d96579f9635becf4da738933759b62af 156 SUPERFAMILY SSF47973 6 149 1.83E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain LK04_RS00840 d96579f9635becf4da738933759b62af 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 7.0E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain LK04_RS00840 d96579f9635becf4da738933759b62af 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.4E-71 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 LK04_RS00840 d96579f9635becf4da738933759b62af 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 LK04_RS00840 d96579f9635becf4da738933759b62af 156 PIRSF PIRSF002122 3 156 3.9E-63 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 LK04_RS00840 d96579f9635becf4da738933759b62af 156 Gene3D G3DSA:1.10.455.10 8 156 2.9E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain LK04_RS06700 b7fa942646958e4b7916221ee2b65799 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 275 1.1E-5 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06700 b7fa942646958e4b7916221ee2b65799 294 SUPERFAMILY SSF161098 81 272 2.94E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06700 b7fa942646958e4b7916221ee2b65799 294 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 27 279 4.2E-77 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 LK04_RS06700 b7fa942646958e4b7916221ee2b65799 294 PANTHER PTHR30043:SF5 11 286 2.0E-151 T 22-04-2016 LK04_RS06700 b7fa942646958e4b7916221ee2b65799 294 PANTHER PTHR30043 11 286 2.0E-151 T 22-04-2016 LK04_RS06700 b7fa942646958e4b7916221ee2b65799 294 Gene3D G3DSA:1.10.3720.10 82 279 6.9E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16040 7b05cd25642925a0e4c78051d66ae0cf 340 Gene3D G3DSA:3.40.50.2300 180 310 2.8E-48 T 22-04-2016 LK04_RS16040 7b05cd25642925a0e4c78051d66ae0cf 340 SMART SM00354 8 79 2.5E-24 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS16040 7b05cd25642925a0e4c78051d66ae0cf 340 Gene3D G3DSA:1.10.260.40 9 61 2.5E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS16040 7b05cd25642925a0e4c78051d66ae0cf 340 Pfam PF13377 Periplasmic binding protein-like domain 176 311 1.1E-30 T 22-04-2016 LK04_RS16040 7b05cd25642925a0e4c78051d66ae0cf 340 SUPERFAMILY SSF53822 68 333 6.48E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS16040 7b05cd25642925a0e4c78051d66ae0cf 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 56 1.3E-12 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS16040 7b05cd25642925a0e4c78051d66ae0cf 340 PANTHER PTHR30146 8 310 2.9E-98 T 22-04-2016 LK04_RS16040 7b05cd25642925a0e4c78051d66ae0cf 340 SUPERFAMILY SSF47413 8 67 9.09E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS16040 7b05cd25642925a0e4c78051d66ae0cf 340 Gene3D G3DSA:3.40.50.2300 62 179 5.2E-38 T 22-04-2016 LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 PANTHER PTHR13779 1 334 2.0E-191 T 22-04-2016 LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 SUPERFAMILY SSF52540 23 254 4.55E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 334 6.0E-38 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 238 1.7E-116 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 183.562 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 Gene3D G3DSA:3.40.50.300 23 178 3.3E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 4.3E-35 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.3E-147 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 SUPERFAMILY SSF46785 260 330 3.76E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 Gene3D G3DSA:1.10.10.10 260 330 9.7E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 Gene3D G3DSA:1.10.8.60 187 258 1.3E-30 T 22-04-2016 LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 PANTHER PTHR13779:SF25 1 334 2.0E-191 T 22-04-2016 LK04_RS07420 6e9cbca635df763d470256a3f96d7dd4 334 SMART SM00382 54 181 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 PANTHER PTHR23309:SF18 8 719 0.0 T 22-04-2016 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 Gene3D G3DSA:3.40.50.720 312 496 1.1E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 SUPERFAMILY SSF48179 622 713 2.13E-22 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 492 516 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 Gene3D G3DSA:1.10.1040.10 497 592 6.2E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 Gene3D G3DSA:1.10.1040.10 632 708 5.4E-15 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 SUPERFAMILY SSF48179 494 611 1.62E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 626 680 4.2E-5 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 495 591 3.7E-26 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 713 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 SUPERFAMILY SSF52096 2 305 4.05E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 214 4.0E-40 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 PANTHER PTHR23309 8 719 0.0 T 22-04-2016 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 315 493 1.1E-62 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 Gene3D G3DSA:3.90.226.10 7 201 3.1E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 Gene3D G3DSA:3.90.226.10 234 295 3.1E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS17895 a126b22d9c9ae1b8e4443244ac3308cb 727 SUPERFAMILY SSF51735 314 494 1.69E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 PANTHER PTHR23416 1 254 1.6E-140 T 22-04-2016 LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 Gene3D G3DSA:1.20.1180.10 197 262 1.8E-27 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.8E-9 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 1.2E-8 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 7.8E-30 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.335 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 8.7E-111 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 PANTHER PTHR23416:SF8 1 254 1.6E-140 T 22-04-2016 LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 SUPERFAMILY SSF51161 2 262 3.4E-82 T 22-04-2016 IPR011004 Trimeric LpxA-like LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 PIRSF PIRSF000456 4 262 7.1E-109 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 Gene3D G3DSA:2.160.10.10 5 194 4.0E-51 T 22-04-2016 LK04_RS14925 729c0c5ef33a79e35d4e21d8e5bce9f4 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LK04_RS12495 e40ea6d7714279cf235fdddcae896c6f 310 SUPERFAMILY SSF53335 44 296 3.28E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS12495 e40ea6d7714279cf235fdddcae896c6f 310 PIRSF PIRSF029038 1 309 4.4E-131 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 LK04_RS12495 e40ea6d7714279cf235fdddcae896c6f 310 PANTHER PTHR13393:SF0 11 302 5.2E-116 T 22-04-2016 LK04_RS12495 e40ea6d7714279cf235fdddcae896c6f 310 PANTHER PTHR13393 11 302 5.2E-116 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 LK04_RS12495 e40ea6d7714279cf235fdddcae896c6f 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 184 190 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS12495 e40ea6d7714279cf235fdddcae896c6f 310 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 7 300 50.151 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 LK04_RS12495 e40ea6d7714279cf235fdddcae896c6f 310 Gene3D G3DSA:3.40.50.150 65 199 4.5E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS12495 e40ea6d7714279cf235fdddcae896c6f 310 Pfam PF05971 Protein of unknown function (DUF890) 6 297 1.6E-117 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 LK04_RS19850 b4796998e59e65bc8425abe2045c4d39 101 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 20 92 1.0E-30 T 22-04-2016 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 LK04_RS14765 30093565b38829516f0fcdc03d646493 243 PANTHER PTHR30231:SF0 1 242 3.1E-149 T 22-04-2016 LK04_RS14765 30093565b38829516f0fcdc03d646493 243 Pfam PF00929 Exonuclease 9 175 1.4E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LK04_RS14765 30093565b38829516f0fcdc03d646493 243 SUPERFAMILY SSF53098 4 185 5.7E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS14765 30093565b38829516f0fcdc03d646493 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 2.3E-89 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS14765 30093565b38829516f0fcdc03d646493 243 SMART SM00479 7 184 2.7E-47 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LK04_RS14765 30093565b38829516f0fcdc03d646493 243 Gene3D G3DSA:3.30.420.10 4 184 1.6E-64 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS14765 30093565b38829516f0fcdc03d646493 243 PANTHER PTHR30231 1 242 3.1E-149 T 22-04-2016 LK04_RS14765 30093565b38829516f0fcdc03d646493 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 7.7E-93 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS16465 121258def3aaa93afb9dbd5a7bb80260 220 SMART SM00448 1 112 1.1E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS16465 121258def3aaa93afb9dbd5a7bb80260 220 PANTHER PTHR26402:SF595 1 217 2.7E-131 T 22-04-2016 LK04_RS16465 121258def3aaa93afb9dbd5a7bb80260 220 Gene3D G3DSA:1.10.10.10 123 218 3.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16465 121258def3aaa93afb9dbd5a7bb80260 220 SUPERFAMILY SSF52172 1 171 1.2E-38 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS16465 121258def3aaa93afb9dbd5a7bb80260 220 SMART SM00862 145 216 5.1E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS16465 121258def3aaa93afb9dbd5a7bb80260 220 Gene3D G3DSA:3.40.50.2300 1 122 1.3E-35 T 22-04-2016 LK04_RS16465 121258def3aaa93afb9dbd5a7bb80260 220 Pfam PF00072 Response regulator receiver domain 4 112 2.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS16465 121258def3aaa93afb9dbd5a7bb80260 220 PANTHER PTHR26402 1 217 2.7E-131 T 22-04-2016 LK04_RS16465 121258def3aaa93afb9dbd5a7bb80260 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.0E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS16885 7928e7369a0b14f51596b394b628ce9f 336 Gene3D G3DSA:3.30.360.10 135 332 8.5E-42 T 22-04-2016 LK04_RS16885 7928e7369a0b14f51596b394b628ce9f 336 SUPERFAMILY SSF51735 4 149 3.27E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16885 7928e7369a0b14f51596b394b628ce9f 336 PANTHER PTHR22604:SF92 6 334 5.9E-71 T 22-04-2016 LK04_RS16885 7928e7369a0b14f51596b394b628ce9f 336 PANTHER PTHR22604 6 334 5.9E-71 T 22-04-2016 LK04_RS16885 7928e7369a0b14f51596b394b628ce9f 336 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 164 237 3.4E-5 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS16885 7928e7369a0b14f51596b394b628ce9f 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 3.1E-24 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS16885 7928e7369a0b14f51596b394b628ce9f 336 SUPERFAMILY SSF55347 130 288 9.65E-23 T 22-04-2016 LK04_RS16885 7928e7369a0b14f51596b394b628ce9f 336 Gene3D G3DSA:3.40.50.720 2 134 4.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00770 ed9b4c2feeb291e6a1ca37b77d925836 275 PANTHER PTHR30151:SF0 7 275 6.2E-122 T 22-04-2016 LK04_RS00770 ed9b4c2feeb291e6a1ca37b77d925836 275 Gene3D G3DSA:1.10.3720.10 71 269 1.5E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00770 ed9b4c2feeb291e6a1ca37b77d925836 275 PANTHER PTHR30151 7 275 6.2E-122 T 22-04-2016 LK04_RS00770 ed9b4c2feeb291e6a1ca37b77d925836 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 268 9.3E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00770 ed9b4c2feeb291e6a1ca37b77d925836 275 SUPERFAMILY SSF161098 75 258 1.57E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 313 1.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 2.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 Gene3D G3DSA:1.10.287.130 241 313 7.6E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 SMART SM00388 249 317 2.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 467 1.5E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 SUPERFAMILY SSF55874 320 468 6.94E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 Gene3D G3DSA:3.30.565.10 320 468 2.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 PANTHER PTHR24423:SF473 1 11 1.7E-177 T 22-04-2016 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 SUPERFAMILY SSF47384 234 313 6.67E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 SMART SM00387 360 470 4.8E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 Pfam PF00672 HAMP domain 176 243 1.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 PANTHER PTHR24423:SF473 189 474 1.7E-177 T 22-04-2016 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 PANTHER PTHR24423 189 474 1.7E-177 T 22-04-2016 LK04_RS04085 f25d1270133022926afc46ad2e66eb41 475 PANTHER PTHR24423 1 11 1.7E-177 T 22-04-2016 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 Pfam PF13328 HD domain 26 175 7.2E-53 T 22-04-2016 IPR003607 HD/PDEase domain LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 Gene3D G3DSA:3.30.70.260 626 697 3.8E-6 T 22-04-2016 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 SUPERFAMILY SSF109604 3 190 1.18E-74 T 22-04-2016 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 SMART SM00471 41 153 6.0E-12 T 22-04-2016 IPR003607 HD/PDEase domain LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 Pfam PF02824 TGS domain 388 447 1.9E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 SUPERFAMILY SSF81301 180 392 3.6E-62 T 22-04-2016 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 Pfam PF13291 ACT domain 623 699 6.7E-16 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 699 3.6E-286 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 PANTHER PTHR21262 3 702 0.0 T 22-04-2016 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 SUPERFAMILY SSF81271 375 447 1.33E-20 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 PANTHER PTHR21262:SF0 3 702 0.0 T 22-04-2016 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 SMART SM00954 235 345 1.5E-63 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 SUPERFAMILY SSF55021 626 699 5.41E-6 T 22-04-2016 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 Gene3D G3DSA:3.30.460.10 178 324 7.5E-48 T 22-04-2016 LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 Gene3D G3DSA:3.10.20.30 387 448 6.1E-22 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS19270 fb944985acdc2572b5678fab46fbc74f 702 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 3.5E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 SMART SM00342 21 104 6.5E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 SUPERFAMILY SSF46689 5 55 3.72E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 Gene3D G3DSA:1.10.10.60 3 57 9.9E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 PANTHER PTHR11019 5 112 1.6E-42 T 22-04-2016 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 Gene3D G3DSA:1.10.10.60 58 108 4.3E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 SUPERFAMILY SSF46689 58 107 4.03E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 Pfam PF12833 Helix-turn-helix domain 28 105 2.3E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS09645 d69ce2f1a675751ac8c7236136e9cdd4 115 PANTHER PTHR11019:SF84 5 112 1.6E-42 T 22-04-2016 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Gene3D G3DSA:3.40.50.10050 695 774 2.1E-25 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 SUPERFAMILY SSF50447 797 893 1.5E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 893 17.566 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 ProSitePatterns PS01176 Initiation factor 2 signature. 846 868 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 SUPERFAMILY SSF52156 673 802 1.44E-38 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 SUPERFAMILY SSF50447 570 650 4.37E-22 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Gene3D G3DSA:3.30.56.50 2 50 3.9E-24 T 22-04-2016 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Gene3D G3DSA:2.40.30.10 797 894 5.8E-39 T 22-04-2016 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 398 554 4.3E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Pfam PF11987 Translation-initiation factor 2 680 785 3.0E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 PANTHER PTHR23115:SF184 373 723 1.3E-212 T 22-04-2016 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 PANTHER PTHR23115:SF184 748 896 1.3E-212 T 22-04-2016 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 59 95 1.3E-14 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 3.6E-8 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 320 370 1.2E-12 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Pfam PF00009 Elongation factor Tu GTP binding domain 399 556 2.8E-33 T 22-04-2016 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Gene3D G3DSA:2.40.30.10 570 659 7.1E-20 T 22-04-2016 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 PANTHER PTHR23115 373 723 1.3E-212 T 22-04-2016 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 PANTHER PTHR23115 748 896 1.3E-212 T 22-04-2016 LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 Gene3D G3DSA:3.40.50.300 389 555 7.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 SUPERFAMILY SSF52540 393 561 1.23E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 SUPERFAMILY SSF46955 3 50 2.01E-13 T 22-04-2016 IPR009061 Putative DNA-binding domain LK04_RS16400 52c690c66728360000171f2f4f649cdf 896 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 312 895 6.9E-292 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 PIRSF PIRSF001365 1 292 2.0E-96 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 PANTHER PTHR12128:SF34 1 291 1.5E-143 T 22-04-2016 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 286 2.1E-119 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 SUPERFAMILY SSF51569 1 290 2.09E-98 T 22-04-2016 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 64.862 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 SMART SM01130 1 290 4.7E-141 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 3.3E-115 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 PANTHER PTHR12128 1 291 1.5E-143 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.4E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.4E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.4E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.4E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS04420 d9dfb5d611ae5bcea50623ec4fccbdc6 292 Gene3D G3DSA:3.20.20.70 1 291 1.8E-116 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS07255 eb913f92bdec541dd059f5d11dc671da 471 SUPERFAMILY SSF56112 13 327 2.43E-45 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS07255 eb913f92bdec541dd059f5d11dc671da 471 Gene3D G3DSA:1.10.510.10 149 287 3.1E-19 T 22-04-2016 LK04_RS07255 eb913f92bdec541dd059f5d11dc671da 471 PANTHER PTHR24362:SF160 79 295 8.0E-42 T 22-04-2016 LK04_RS07255 eb913f92bdec541dd059f5d11dc671da 471 PANTHER PTHR24362:SF160 19 61 8.0E-42 T 22-04-2016 LK04_RS07255 eb913f92bdec541dd059f5d11dc671da 471 Pfam PF00069 Protein kinase domain 21 240 4.5E-22 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LK04_RS07255 eb913f92bdec541dd059f5d11dc671da 471 PANTHER PTHR24362 79 295 8.0E-42 T 22-04-2016 LK04_RS07255 eb913f92bdec541dd059f5d11dc671da 471 PANTHER PTHR24362 19 61 8.0E-42 T 22-04-2016 LK04_RS07255 eb913f92bdec541dd059f5d11dc671da 471 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 27 50 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 LK04_RS07255 eb913f92bdec541dd059f5d11dc671da 471 Gene3D G3DSA:3.30.200.20 6 148 2.1E-20 T 22-04-2016 LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 Pfam PF00271 Helicase conserved C-terminal domain 241 343 1.0E-11 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 PANTHER PTHR24031:SF319 233 366 3.4E-201 T 22-04-2016 LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 PANTHER PTHR24031:SF319 442 584 3.4E-201 T 22-04-2016 LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 PANTHER PTHR24031:SF319 1 153 3.4E-201 T 22-04-2016 LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 PANTHER PTHR24031:SF319 172 208 3.4E-201 T 22-04-2016 LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 SUPERFAMILY SSF57829 423 465 8.61E-7 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 SUPERFAMILY SSF52540 237 358 1.74E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 SUPERFAMILY SSF52540 50 169 1.74E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 PANTHER PTHR24031 233 366 3.4E-201 T 22-04-2016 LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 PANTHER PTHR24031 442 584 3.4E-201 T 22-04-2016 LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 PANTHER PTHR24031 1 153 3.4E-201 T 22-04-2016 LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 PANTHER PTHR24031 172 208 3.4E-201 T 22-04-2016 LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 Gene3D G3DSA:3.40.50.300 237 353 2.0E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 SMART SM00487 1 175 9.0E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 SMART SM00490 263 344 1.6E-10 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 Gene3D G3DSA:3.40.50.300 3 155 1.7E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05695 574b55c4660cc45ce7c4fdbd32392c18 584 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 1.8E-24 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LK04_RS03940 aea333625ea11c8484026f528b485a54 160 SUPERFAMILY SSF74982 8 138 1.02E-48 T 22-04-2016 IPR023620 Small protein B LK04_RS03940 aea333625ea11c8484026f528b485a54 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 3.0E-62 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 LK04_RS03940 aea333625ea11c8484026f528b485a54 160 PANTHER PTHR30308 1 160 1.1E-80 T 22-04-2016 LK04_RS03940 aea333625ea11c8484026f528b485a54 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 70.744 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 LK04_RS03940 aea333625ea11c8484026f528b485a54 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site LK04_RS03940 aea333625ea11c8484026f528b485a54 160 Gene3D G3DSA:2.40.280.10 13 133 1.6E-47 T 22-04-2016 IPR023620 Small protein B LK04_RS03940 aea333625ea11c8484026f528b485a54 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 9.3E-52 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 LK04_RS03940 aea333625ea11c8484026f528b485a54 160 PANTHER PTHR30308:SF2 1 160 1.1E-80 T 22-04-2016 LK04_RS03940 aea333625ea11c8484026f528b485a54 160 Pfam PF01668 SmpB protein 13 74 1.1E-26 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 Pfam PF05228 CHASE4 domain 61 214 9.1E-17 T 22-04-2016 IPR007892 CHASE4 LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 300 462 3.1E-43 T 22-04-2016 IPR000160 GGDEF domain LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 SUPERFAMILY SSF55073 308 465 6.91E-52 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 Pfam PF00563 EAL domain 481 710 1.6E-67 T 22-04-2016 IPR001633 EAL domain LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 SMART SM00267 292 464 2.9E-67 T 22-04-2016 IPR000160 GGDEF domain LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 SUPERFAMILY SSF141868 482 720 1.44E-80 T 22-04-2016 IPR001633 EAL domain LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 SMART SM00052 474 716 8.0E-105 T 22-04-2016 IPR001633 EAL domain LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 Gene3D G3DSA:3.20.20.450 477 721 2.9E-88 T 22-04-2016 IPR001633 EAL domain LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 Gene3D G3DSA:3.30.70.270 304 471 9.2E-60 T 22-04-2016 LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 PANTHER PTHR10799:SF774 261 555 1.6E-80 T 22-04-2016 LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 PANTHER PTHR10799:SF774 606 625 1.6E-80 T 22-04-2016 LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 459 2.3E-51 T 22-04-2016 IPR000160 GGDEF domain LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 PANTHER PTHR10799 261 555 1.6E-80 T 22-04-2016 LK04_RS06630 550bc9a99d00e755d3e80bbcdc7366f3 721 PANTHER PTHR10799 606 625 1.6E-80 T 22-04-2016 LK04_RS04635 54b5818e59ef8f95c01f9c9a67b88cd0 293 Gene3D G3DSA:3.40.50.1100 40 139 3.0E-39 T 22-04-2016 LK04_RS04635 54b5818e59ef8f95c01f9c9a67b88cd0 293 PANTHER PTHR10314:SF100 3 292 4.9E-176 T 22-04-2016 LK04_RS04635 54b5818e59ef8f95c01f9c9a67b88cd0 293 Gene3D G3DSA:3.40.50.1100 2 39 4.6E-80 T 22-04-2016 LK04_RS04635 54b5818e59ef8f95c01f9c9a67b88cd0 293 Gene3D G3DSA:3.40.50.1100 146 292 4.6E-80 T 22-04-2016 LK04_RS04635 54b5818e59ef8f95c01f9c9a67b88cd0 293 PANTHER PTHR10314 3 292 4.9E-176 T 22-04-2016 LK04_RS04635 54b5818e59ef8f95c01f9c9a67b88cd0 293 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 LK04_RS04635 54b5818e59ef8f95c01f9c9a67b88cd0 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 281 1.6E-73 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS04635 54b5818e59ef8f95c01f9c9a67b88cd0 293 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.7E-121 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 LK04_RS04635 54b5818e59ef8f95c01f9c9a67b88cd0 293 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 1.5E-152 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 LK04_RS04635 54b5818e59ef8f95c01f9c9a67b88cd0 293 SUPERFAMILY SSF53686 4 289 3.8E-94 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 2.1E-36 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 Gene3D G3DSA:3.30.1240.10 83 174 2.4E-15 T 22-04-2016 LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 273 59.627 T 22-04-2016 IPR023938 HMP-PP phosphatase GO:0016818 LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 22-04-2016 LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 PANTHER PTHR10000:SF21 1 264 2.7E-139 T 22-04-2016 LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 PANTHER PTHR10000 1 264 2.7E-139 T 22-04-2016 LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 7.7E-51 T 22-04-2016 IPR000150 Cof protein GO:0016787 LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 5.8E-53 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 SUPERFAMILY SSF56784 1 262 1.17E-60 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 Gene3D G3DSA:3.40.50.1000 2 72 1.1E-46 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 Gene3D G3DSA:3.40.50.1000 175 262 1.1E-46 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13935 6c0dba39402ccbcc5e6cab56fc1aa7dd 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 LK04_RS09795 da9278702ebdc3088a8bc99f3ab0ac39 247 Gene3D G3DSA:2.60.40.1080 162 245 4.7E-20 T 22-04-2016 LK04_RS09795 da9278702ebdc3088a8bc99f3ab0ac39 247 SUPERFAMILY SSF49373 161 244 6.67E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments LK04_RS09795 da9278702ebdc3088a8bc99f3ab0ac39 247 Pfam PF02368 Bacterial Ig-like domain (group 2) 165 242 1.4E-21 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 LK04_RS09795 da9278702ebdc3088a8bc99f3ab0ac39 247 SMART SM00635 164 241 8.1E-21 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 SUPERFAMILY SSF52540 10 277 3.33E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.1E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 PANTHER PTHR23115:SF69 1 184 2.1E-255 T 22-04-2016 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 PANTHER PTHR23115:SF69 251 472 2.1E-255 T 22-04-2016 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 SUPERFAMILY SSF54980 393 468 2.55E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 163 2.2E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 Gene3D G3DSA:2.40.30.10 292 394 5.0E-26 T 22-04-2016 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 Gene3D G3DSA:3.40.50.300 9 283 6.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 6.7E-47 T 22-04-2016 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.511 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.1E-46 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.7E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 2.7E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.7E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.7E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 2.7E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 0.0 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 Gene3D G3DSA:3.30.70.870 395 464 7.8E-14 T 22-04-2016 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 PANTHER PTHR23115 1 184 2.1E-255 T 22-04-2016 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 PANTHER PTHR23115 251 472 2.1E-255 T 22-04-2016 LK04_RS02240 7f0a394794b0770e47a68c3bb4d69c3f 529 SUPERFAMILY SSF50447 262 393 5.52E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS02580 270c454bee951517d2b72431c40f03aa 179 PANTHER PTHR33169:SF2 26 176 2.4E-17 T 22-04-2016 LK04_RS02580 270c454bee951517d2b72431c40f03aa 179 SUPERFAMILY SSF46785 36 158 7.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02580 270c454bee951517d2b72431c40f03aa 179 Gene3D G3DSA:1.10.10.10 24 125 4.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02580 270c454bee951517d2b72431c40f03aa 179 Pfam PF03551 Transcriptional regulator PadR-like family 40 109 5.3E-14 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal LK04_RS02580 270c454bee951517d2b72431c40f03aa 179 PANTHER PTHR33169 26 176 2.4E-17 T 22-04-2016 LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 Pfam PF05127 Helicase 189 330 1.5E-40 T 22-04-2016 IPR007807 Helicase domain LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 SUPERFAMILY SSF52540 171 280 4.02E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 Pfam PF17176 tRNA-binding domain 527 642 2.6E-36 T 22-04-2016 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 Pfam PF13718 GNAT acetyltransferase 2 362 473 1.2E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 14 638 47.956 T 22-04-2016 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 SUPERFAMILY SSF55729 361 408 2.42E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 SUPERFAMILY SSF55729 444 503 2.42E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 Gene3D G3DSA:3.40.630.30 372 409 1.2E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 Gene3D G3DSA:3.40.630.30 444 503 1.2E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 PANTHER PTHR10925 1 607 1.4E-215 T 22-04-2016 IPR032672 TmcA/NAT10/Kre33 GO:0008080 LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 Pfam PF08351 Domain of unknown function (DUF1726) 63 147 7.5E-7 T 22-04-2016 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal LK04_RS04440 a0256ee8a1a8e177caf1ac5503e389ee 655 PANTHER PTHR10925:SF6 1 607 1.4E-215 T 22-04-2016 LK04_RS15900 86b63ba8f2aa621796a0ff2a66d749c0 263 PANTHER PTHR24220 24 263 3.8E-141 T 22-04-2016 LK04_RS15900 86b63ba8f2aa621796a0ff2a66d749c0 263 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 22 263 6.8E-115 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD LK04_RS15900 86b63ba8f2aa621796a0ff2a66d749c0 263 SUPERFAMILY SSF52540 21 261 4.77E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15900 86b63ba8f2aa621796a0ff2a66d749c0 263 Pfam PF00005 ABC transporter 38 192 2.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS15900 86b63ba8f2aa621796a0ff2a66d749c0 263 Gene3D G3DSA:3.40.50.300 19 258 1.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15900 86b63ba8f2aa621796a0ff2a66d749c0 263 PANTHER PTHR24220:SF366 24 263 3.8E-141 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD LK04_RS15900 86b63ba8f2aa621796a0ff2a66d749c0 263 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 240 262 3.0E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LK04_RS12235 382f967dbc691e484f61480fcb4654c9 222 SUPERFAMILY SSF161098 6 200 1.7E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12235 382f967dbc691e484f61480fcb4654c9 222 PANTHER PTHR30614 1 221 3.9E-144 T 22-04-2016 LK04_RS12235 382f967dbc691e484f61480fcb4654c9 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 215 1.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12235 382f967dbc691e484f61480fcb4654c9 222 Gene3D G3DSA:1.10.3720.10 3 214 3.0E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12235 382f967dbc691e484f61480fcb4654c9 222 PANTHER PTHR30614:SF10 1 221 3.9E-144 T 22-04-2016 LK04_RS12235 382f967dbc691e484f61480fcb4654c9 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 1.4E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS14710 80cbc6b0fc6c1b0f548e8c707521062f 261 PANTHER PTHR18966 21 250 2.6E-39 T 22-04-2016 LK04_RS14710 80cbc6b0fc6c1b0f548e8c707521062f 261 Gene3D G3DSA:3.40.190.10 16 139 1.4E-37 T 22-04-2016 LK04_RS14710 80cbc6b0fc6c1b0f548e8c707521062f 261 PANTHER PTHR18966:SF191 21 250 2.6E-39 T 22-04-2016 LK04_RS14710 80cbc6b0fc6c1b0f548e8c707521062f 261 SMART SM00062 34 254 3.8E-49 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS14710 80cbc6b0fc6c1b0f548e8c707521062f 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 252 1.1E-48 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS14710 80cbc6b0fc6c1b0f548e8c707521062f 261 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LK04_RS14710 80cbc6b0fc6c1b0f548e8c707521062f 261 Gene3D G3DSA:3.40.190.10 140 201 1.0E-11 T 22-04-2016 LK04_RS14710 80cbc6b0fc6c1b0f548e8c707521062f 261 SUPERFAMILY SSF53850 1 253 3.15E-56 T 22-04-2016 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 212 2.6E-77 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 Gene3D G3DSA:3.40.190.10 3 110 7.8E-48 T 22-04-2016 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.6E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.6E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.6E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.6E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.6E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 PIRSF PIRSF001438 1 311 2.7E-120 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 SUPERFAMILY SSF54782 220 309 4.45E-28 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 1.5E-22 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 PANTHER PTHR11557 1 308 7.9E-166 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 Gene3D G3DSA:3.40.190.10 111 199 1.5E-40 T 22-04-2016 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 SUPERFAMILY SSF53850 5 219 7.44E-86 T 22-04-2016 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.575 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 296 2.3E-113 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18090 fcb7e37889071c8640629b4d7fa43536 313 Gene3D G3DSA:3.30.160.40 221 305 8.0E-27 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 SMART SM00851 19 132 1.3E-63 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 4.8E-118 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 PIRSF PIRSF000414 1 529 7.5E-227 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 PANTHER PTHR11692 5 529 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 SUPERFAMILY SSF53927 221 529 4.61E-130 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 SMART SM00798 137 461 2.8E-214 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 Gene3D G3DSA:3.40.140.20 377 519 5.8E-60 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 Gene3D G3DSA:3.40.50.1380 5 190 1.9E-85 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 2.2E-266 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.517 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 Gene3D G3DSA:3.40.140.20 253 371 3.6E-50 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 SUPERFAMILY SSF52335 7 197 2.35E-71 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS17710 ab541ec10c981e666754a76473ababdc 529 Pfam PF02142 MGS-like domain 19 132 9.1E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS06690 8ca41028490740e3d841e668a2bb9898 309 PANTHER PTHR35841 3 305 4.1E-75 T 22-04-2016 LK04_RS06690 8ca41028490740e3d841e668a2bb9898 309 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 7 303 4.5E-91 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 LK04_RS06690 8ca41028490740e3d841e668a2bb9898 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 293 2.6E-50 T 22-04-2016 LK04_RS06690 8ca41028490740e3d841e668a2bb9898 309 Gene3D G3DSA:3.40.190.10 53 130 1.3E-5 T 22-04-2016 LK04_RS06690 8ca41028490740e3d841e668a2bb9898 309 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 6 267 2.7E-76 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 LK04_RS06690 8ca41028490740e3d841e668a2bb9898 309 PANTHER PTHR35841:SF1 3 305 4.1E-75 T 22-04-2016 LK04_RS06690 8ca41028490740e3d841e668a2bb9898 309 SUPERFAMILY SSF53850 43 275 1.42E-42 T 22-04-2016 LK04_RS06690 8ca41028490740e3d841e668a2bb9898 309 Gene3D G3DSA:3.40.190.10 131 222 1.7E-10 T 22-04-2016 LK04_RS07230 4588ee7b88653eb2d8d91015e4179d19 132 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 127 2.7E-43 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB LK04_RS07230 4588ee7b88653eb2d8d91015e4179d19 132 PANTHER PTHR39594 1 131 1.3E-40 T 22-04-2016 LK04_RS07230 4588ee7b88653eb2d8d91015e4179d19 132 PIRSF PIRSF005610 1 125 1.9E-23 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB LK04_RS09120 63d60f838ef9686e180c03c82cfd6710 152 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 147 1.4E-45 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 LK04_RS09120 63d60f838ef9686e180c03c82cfd6710 152 PIRSF PIRSF005384 2 149 9.7E-52 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 LK04_RS09120 63d60f838ef9686e180c03c82cfd6710 152 Pfam PF02502 Ribose/Galactose Isomerase 4 142 3.6E-49 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 LK04_RS09120 63d60f838ef9686e180c03c82cfd6710 152 SUPERFAMILY SSF89623 2 146 1.2E-50 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 LK04_RS09120 63d60f838ef9686e180c03c82cfd6710 152 PANTHER PTHR30345 1 147 3.2E-68 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 LK04_RS09120 63d60f838ef9686e180c03c82cfd6710 152 Gene3D G3DSA:3.40.1400.10 2 148 2.5E-55 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 327 9.6E-141 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 PANTHER PTHR30534 3 330 1.6E-109 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.4E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.4E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.4E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.4E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.4E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.4E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.4E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 PIRSF PIRSF003161 1 330 2.0E-116 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 Pfam PF14841 FliG middle domain 115 185 7.2E-24 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 Gene3D G3DSA:1.10.220.30 193 329 6.1E-40 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 Gene3D G3DSA:1.10.220.30 73 182 1.1E-28 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 Gene3D G3DSA:1.10.220.30 5 71 2.1E-17 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 Pfam PF14842 FliG N-terminal domain 3 102 2.9E-31 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 Pfam PF01706 FliG C-terminal domain 217 322 3.0E-36 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 SUPERFAMILY SSF48029 114 323 1.96E-61 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 SUPERFAMILY SSF48029 4 103 1.83E-21 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical LK04_RS06950 c4a40604c1e58f23bc668b7879b11cb5 330 PANTHER PTHR30534:SF0 3 330 1.6E-109 T 22-04-2016 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 Gene3D G3DSA:1.10.1020.10 60 156 6.9E-33 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 7.5E-70 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 PANTHER PTHR30481:SF3 2 268 2.2E-122 T 22-04-2016 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 Gene3D G3DSA:3.40.50.150 160 267 6.7E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS00650 fa3321307acd638700bb255330eb8620 270 Gene3D G3DSA:3.40.50.150 1 59 6.7E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS00650 fa3321307acd638700bb255330eb8620 270 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 8.0E-96 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 SUPERFAMILY SSF53335 5 268 1.02E-73 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS00650 fa3321307acd638700bb255330eb8620 270 PIRSF PIRSF000398 1 270 7.8E-66 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.3E-17 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.3E-17 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.3E-17 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.3E-17 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS00650 fa3321307acd638700bb255330eb8620 270 PANTHER PTHR30481 2 268 2.2E-122 T 22-04-2016 LK04_RS00245 06e51e8ddcf43587d69e43a617f5e7df 281 Gene3D G3DSA:3.40.50.1820 49 280 3.5E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS00245 06e51e8ddcf43587d69e43a617f5e7df 281 PANTHER PTHR23024 32 279 4.8E-27 T 22-04-2016 LK04_RS00245 06e51e8ddcf43587d69e43a617f5e7df 281 PANTHER PTHR23024:SF41 32 279 4.8E-27 T 22-04-2016 LK04_RS00245 06e51e8ddcf43587d69e43a617f5e7df 281 SUPERFAMILY SSF53474 45 278 6.37E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS00245 06e51e8ddcf43587d69e43a617f5e7df 281 Pfam PF00326 Prolyl oligopeptidase family 124 277 4.2E-6 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 LK04_RS16510 e1e20a862b244249ab03e7db7550f2bd 321 SUPERFAMILY SSF53807 27 314 8.63E-41 T 22-04-2016 LK04_RS16510 e1e20a862b244249ab03e7db7550f2bd 321 Pfam PF01497 Periplasmic binding protein 49 295 4.6E-24 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LK04_RS16510 e1e20a862b244249ab03e7db7550f2bd 321 Gene3D G3DSA:3.40.50.1980 29 157 9.8E-22 T 22-04-2016 LK04_RS16510 e1e20a862b244249ab03e7db7550f2bd 321 PANTHER PTHR30532 26 318 1.0E-122 T 22-04-2016 LK04_RS16510 e1e20a862b244249ab03e7db7550f2bd 321 PANTHER PTHR30532:SF2 26 318 1.0E-122 T 22-04-2016 LK04_RS16510 e1e20a862b244249ab03e7db7550f2bd 321 Gene3D G3DSA:3.40.50.1980 158 320 4.4E-25 T 22-04-2016 LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 Gene3D G3DSA:3.40.50.720 3 234 8.1E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PANTHER PTHR24322 8 171 1.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 126 154 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 2.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 2.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 2.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 2.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 177 2.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 232 1.7E-53 T 22-04-2016 LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 170 5.5E-4 T 22-04-2016 LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PANTHER PTHR24322:SF459 8 171 1.4E-43 T 22-04-2016 LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 128 8.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 67 78 8.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 158 8.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10765 f3e1b31814724503062ad560b63fb5ff 239 SUPERFAMILY SSF51735 4 234 2.9E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13045 9ccfb91eb175f6db903fd540f6aefc15 228 PANTHER PTHR30625:SF3 3 222 6.4E-78 T 22-04-2016 LK04_RS13045 9ccfb91eb175f6db903fd540f6aefc15 228 PANTHER PTHR30625 3 222 6.4E-78 T 22-04-2016 LK04_RS13045 9ccfb91eb175f6db903fd540f6aefc15 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 4.9E-94 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 LK04_RS13045 9ccfb91eb175f6db903fd540f6aefc15 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 3.7E-42 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 46.65 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PANTHER PTHR13697 2 306 7.2E-137 T 22-04-2016 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 SUPERFAMILY SSF53784 3 311 3.79E-114 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 5.9E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 5.9E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 5.9E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 5.9E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 5.9E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 5.9E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 5.9E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 5.9E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 5.9E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 Pfam PF00365 Phosphofructokinase 4 275 7.7E-108 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 PIRSF PIRSF000532 1 320 1.7E-131 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 1.4E-126 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS19540 840be3b321882d6412baf023d0d0a2fe 320 Gene3D G3DSA:3.40.50.450 2 215 3.5E-77 T 22-04-2016 LK04_RS04445 ed5bf55a72a25df9471e6beee3f9be95 231 PANTHER PTHR10655 6 205 2.5E-22 T 22-04-2016 LK04_RS04445 ed5bf55a72a25df9471e6beee3f9be95 231 SUPERFAMILY SSF53474 3 205 1.79E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS04445 ed5bf55a72a25df9471e6beee3f9be95 231 Pfam PF02230 Phospholipase/Carboxylesterase 6 207 1.9E-34 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 LK04_RS04445 ed5bf55a72a25df9471e6beee3f9be95 231 PANTHER PTHR10655:SF17 6 205 2.5E-22 T 22-04-2016 LK04_RS04445 ed5bf55a72a25df9471e6beee3f9be95 231 Gene3D G3DSA:3.40.50.1820 3 205 1.8E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS10115 47038db9c5301ddd0d5c56205e1d095b 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.132 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 LK04_RS10115 47038db9c5301ddd0d5c56205e1d095b 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.4E-58 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 LK04_RS10115 47038db9c5301ddd0d5c56205e1d095b 193 PANTHER PTHR30335:SF0 2 193 2.4E-126 T 22-04-2016 LK04_RS10115 47038db9c5301ddd0d5c56205e1d095b 193 PIRSF PIRSF006102 1 193 3.8E-57 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 LK04_RS10115 47038db9c5301ddd0d5c56205e1d095b 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-89 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 LK04_RS10115 47038db9c5301ddd0d5c56205e1d095b 193 PANTHER PTHR30335 2 193 2.4E-126 T 22-04-2016 LK04_RS18070 5d4fd55bb624e23173ee7542bf013cab 234 Pfam PF04340 Protein of unknown function, DUF484 14 231 3.2E-75 T 22-04-2016 IPR007435 Protein of unknown function DUF484 LK04_RS18070 5d4fd55bb624e23173ee7542bf013cab 234 PANTHER PTHR38765 2 234 2.4E-81 T 22-04-2016 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 SUPERFAMILY SSF53223 3 122 1.06E-40 T 22-04-2016 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 SUPERFAMILY SSF51735 123 284 3.76E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 6.5E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 6.5E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 6.5E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 6.5E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 6.5E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 6.5E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 6.5E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.0E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 Gene3D G3DSA:3.40.192.10 7 139 1.5E-51 T 22-04-2016 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 PANTHER PTHR10025 1 287 3.9E-180 T 22-04-2016 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.5E-69 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 Gene3D G3DSA:3.40.50.720 140 264 2.5E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS13655 ca42ac297786e14a6db5baf7d3037562 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.31 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LK04_RS01195 ca5de7a9e6debf07e611eb2f277fff49 162 PANTHER PTHR37484 1 162 1.8E-71 T 22-04-2016 LK04_RS01195 ca5de7a9e6debf07e611eb2f277fff49 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 2.7E-42 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 LK04_RS01195 ca5de7a9e6debf07e611eb2f277fff49 162 PIRSF PIRSF018472 2 162 3.6E-58 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type LK04_RS01195 ca5de7a9e6debf07e611eb2f277fff49 162 Pfam PF04093 rod shape-determining protein MreD 5 154 2.1E-44 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 352 1.7E-93 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 SUPERFAMILY SSF51445 33 394 7.48E-101 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 PANTHER PTHR30620:SF5 487 758 0.0 T 22-04-2016 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 PANTHER PTHR30620:SF5 35 471 0.0 T 22-04-2016 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 4.2E-56 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 Pfam PF14310 Fibronectin type III-like domain 686 754 6.6E-23 T 22-04-2016 IPR026891 Fibronectin type III-like domain LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 Gene3D G3DSA:3.20.20.300 32 365 4.1E-106 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 Gene3D G3DSA:3.40.50.1700 383 651 1.9E-74 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 PANTHER PTHR30620 487 758 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 PANTHER PTHR30620 35 471 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 SUPERFAMILY SSF52279 395 464 5.62E-56 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 SUPERFAMILY SSF52279 495 651 5.62E-56 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 4.6E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 4.6E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 4.6E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 4.6E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 4.6E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LK04_RS12720 32446b842aa23447e80efcba5a72ea0b 765 SMART SM01217 685 754 1.9E-32 T 22-04-2016 IPR026891 Fibronectin type III-like domain LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 ProSitePatterns PS00216 Sugar transport proteins signature 1. 313 330 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 SUPERFAMILY SSF103473 6 455 9.42E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 PRINTS PR00171 Sugar transporter signature 269 279 3.4E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 PRINTS PR00171 Sugar transporter signature 354 375 3.4E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 PRINTS PR00171 Sugar transporter signature 107 126 3.4E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 PRINTS PR00171 Sugar transporter signature 377 389 3.4E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 PRINTS PR00171 Sugar transporter signature 24 34 3.4E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 Pfam PF00083 Sugar (and other) transporter 16 456 7.0E-97 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 4 455 1.3E-95 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 Gene3D G3DSA:1.20.1250.20 20 207 9.3E-28 T 22-04-2016 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 Gene3D G3DSA:1.20.1250.20 263 454 1.4E-15 T 22-04-2016 LK04_RS18945 4c4936840e91258e39bbaa2675eb94b8 487 PANTHER PTHR23500 10 455 1.9E-132 T 22-04-2016 LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 9 95 8.9E-21 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 Gene3D G3DSA:2.60.40.10 5 146 1.0E-54 T 22-04-2016 IPR013783 Immunoglobulin-like fold LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 PANTHER PTHR10357 1 630 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 PANTHER PTHR10357:SF152 1 630 0.0 T 22-04-2016 LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 SUPERFAMILY SSF81296 5 141 7.4E-46 T 22-04-2016 IPR014756 Immunoglobulin E-set LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 SUPERFAMILY SSF51445 129 463 2.31E-123 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 SUPERFAMILY SSF51445 492 565 2.31E-123 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 5 633 2.9E-270 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 657 67.415 T 22-04-2016 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 UniPathway: UPA00165 LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 Gene3D G3DSA:3.20.20.80 147 566 4.6E-107 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 SMART SM00642 149 558 4.0E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 Pfam PF00128 Alpha amylase, catalytic domain 184 290 8.6E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LK04_RS17575 1e6c788e376ced1c6698ef905e78dbd6 659 Pfam PF00128 Alpha amylase, catalytic domain 304 522 2.5E-4 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LK04_RS15690 a19c8e03b34168b79ba98093747a0a78 189 Pfam PF12158 Protein of unknown function (DUF3592) 32 163 4.8E-9 T 22-04-2016 IPR021994 Protein of unknown function DUF3592 LK04_RS13385 fe4f7195ec87d4b8d22012d584665675 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.1E-137 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 LK04_RS13385 fe4f7195ec87d4b8d22012d584665675 370 PANTHER PTHR30474 1 370 4.1E-180 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LK04_RS13385 fe4f7195ec87d4b8d22012d584665675 370 Pfam PF01098 Cell cycle protein 21 364 1.1E-123 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LK04_RS13385 fe4f7195ec87d4b8d22012d584665675 370 PANTHER PTHR30474:SF1 1 370 4.1E-180 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 LK04_RS13385 fe4f7195ec87d4b8d22012d584665675 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 Pfam PF00989 PAS fold 99 168 1.2E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 Gene3D G3DSA:1.10.287.130 195 254 6.1E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 SMART SM00388 203 269 4.3E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 PANTHER PTHR24423 1 426 1.3E-182 T 22-04-2016 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 Gene3D G3DSA:3.30.565.10 255 422 7.4E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 9.1E-32 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 4.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 4.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 4.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 4.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 SMART SM00091 98 165 6.8E-6 T 22-04-2016 IPR000014 PAS domain LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 420 2.9E-131 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 423 1.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 1.8E-7 T 22-04-2016 IPR000014 PAS domain LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 2.3E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 SMART SM00387 313 425 1.0E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 SUPERFAMILY SSF47384 190 268 1.84E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 SUPERFAMILY SSF55785 87 195 1.29E-9 T 22-04-2016 IPR000014 PAS domain LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 PANTHER PTHR24423:SF554 1 426 1.3E-182 T 22-04-2016 LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 SUPERFAMILY SSF55874 259 422 1.02E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS14195 da56c6e5b9268341612e2619f942021c 437 Gene3D G3DSA:3.30.450.20 99 194 5.7E-9 T 22-04-2016 LK04_RS01885 21c64ead442c2ca13442d8e3ce550e58 171 PANTHER PTHR12159 7 167 5.8E-60 T 22-04-2016 IPR015637 G/U mismatch-specific DNA glycosylase GO:0006281|GO:0019104 LK04_RS01885 21c64ead442c2ca13442d8e3ce550e58 171 SMART SM00987 7 161 8.3E-6 T 22-04-2016 LK04_RS01885 21c64ead442c2ca13442d8e3ce550e58 171 Gene3D G3DSA:3.40.470.10 6 168 6.2E-58 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LK04_RS01885 21c64ead442c2ca13442d8e3ce550e58 171 SUPERFAMILY SSF52141 6 167 1.09E-45 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LK04_RS01885 21c64ead442c2ca13442d8e3ce550e58 171 Pfam PF03167 Uracil DNA glycosylase superfamily 10 163 2.2E-25 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LK04_RS01885 21c64ead442c2ca13442d8e3ce550e58 171 SMART SM00986 7 161 8.3E-6 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 Gene3D G3DSA:3.30.390.10 3 126 5.6E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 7.0E-204 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 SMART SM01193 4 134 9.3E-92 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 1.6E-139 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 SUPERFAMILY SSF51604 143 427 7.89E-128 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 PIRSF PIRSF001400 1 430 6.8E-191 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 SUPERFAMILY SSF54826 3 138 3.33E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 PRINTS PR00148 Enolase signature 368 385 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 PRINTS PR00148 Enolase signature 316 327 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 PRINTS PR00148 Enolase signature 339 353 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 Gene3D G3DSA:3.20.20.120 128 428 7.7E-136 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 Hamap MF_00318 Enolase [eno]. 2 416 43.981 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 SMART SM01192 143 430 2.3E-212 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 PANTHER PTHR11902 1 427 4.4E-273 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS03425 252e83463d37e6da98d08e3fa7a6ce26 431 Pfam PF03952 Enolase, N-terminal domain 4 134 1.4E-57 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LK04_RS09045 d2261d820cce10b69e5aa3d5cd4eac5f 83 SUPERFAMILY SSF47413 5 65 7.78E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS09045 d2261d820cce10b69e5aa3d5cd4eac5f 83 SMART SM00530 11 66 1.0E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS09045 d2261d820cce10b69e5aa3d5cd4eac5f 83 Pfam PF01381 Helix-turn-helix 14 64 5.2E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS09045 d2261d820cce10b69e5aa3d5cd4eac5f 83 Gene3D G3DSA:1.10.260.40 5 63 5.6E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 SMART SM00382 50 166 9.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 Gene3D G3DSA:1.20.272.10 250 348 5.5E-42 T 22-04-2016 LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.7E-64 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 SUPERFAMILY SSF48019 253 435 2.25E-71 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 Gene3D G3DSA:1.10.3710.10 349 445 3.9E-34 T 22-04-2016 LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 Gene3D G3DSA:3.40.50.300 12 154 6.1E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 Gene3D G3DSA:1.10.8.60 155 225 2.8E-8 T 22-04-2016 LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 PANTHER PTHR13779 12 448 1.1E-199 T 22-04-2016 LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 PANTHER PTHR13779:SF7 12 448 1.1E-199 T 22-04-2016 LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 Pfam PF16193 AAA C-terminal domain 189 268 6.3E-22 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 SUPERFAMILY SSF52540 11 235 2.74E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12125 055ad89c33b42e1bb64b85163372c6d2 448 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 139 2.7E-16 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 LK04_RS11330 e99e8751a007b389bd228092f2ecfa43 173 Pfam PF02620 Uncharacterized ACR, COG1399 61 171 1.2E-18 T 22-04-2016 IPR003772 Protein of unknown function DUF177 LK04_RS11330 e99e8751a007b389bd228092f2ecfa43 173 PANTHER PTHR38099 2 173 1.3E-79 T 22-04-2016 LK04_RS03550 ba89331a70b82999122b3188e711e6f0 111 Gene3D G3DSA:2.20.25.10 1 40 3.3E-16 T 22-04-2016 LK04_RS03550 ba89331a70b82999122b3188e711e6f0 111 SUPERFAMILY SSF57783 3 35 2.89E-10 T 22-04-2016 LK04_RS03550 ba89331a70b82999122b3188e711e6f0 111 PANTHER PTHR30305 2 111 9.4E-78 T 22-04-2016 LK04_RS03550 ba89331a70b82999122b3188e711e6f0 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 2.2E-46 T 22-04-2016 IPR004624 PhnA protein LK04_RS03550 ba89331a70b82999122b3188e711e6f0 111 Gene3D G3DSA:2.30.30.40 42 110 1.6E-38 T 22-04-2016 LK04_RS03550 ba89331a70b82999122b3188e711e6f0 111 Pfam PF08274 PhnA Zinc-Ribbon 3 32 1.3E-9 T 22-04-2016 IPR013987 PhnA protein, N-terminal LK04_RS03550 ba89331a70b82999122b3188e711e6f0 111 Pfam PF03831 PhnA domain 44 111 1.4E-34 T 22-04-2016 IPR013988 PhnA protein, C-terminal LK04_RS03550 ba89331a70b82999122b3188e711e6f0 111 SUPERFAMILY SSF82057 40 110 9.16E-29 T 22-04-2016 LK04_RS01320 b959659fc21114ea2a11c4421f8c1647 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 9.3E-54 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 LK04_RS01320 b959659fc21114ea2a11c4421f8c1647 158 PANTHER PTHR33540:SF2 1 158 1.8E-50 T 22-04-2016 LK04_RS01320 b959659fc21114ea2a11c4421f8c1647 158 PANTHER PTHR33540 1 158 1.8E-50 T 22-04-2016 LK04_RS01320 b959659fc21114ea2a11c4421f8c1647 158 Gene3D G3DSA:3.40.50.300 5 151 1.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01320 b959659fc21114ea2a11c4421f8c1647 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 130 4.7E-41 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 LK04_RS01320 b959659fc21114ea2a11c4421f8c1647 158 SUPERFAMILY SSF52540 30 135 4.79E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00715 403e393636806f50b82176e91734f95a 406 PANTHER PTHR11986 1 406 1.2E-219 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS00715 403e393636806f50b82176e91734f95a 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS00715 403e393636806f50b82176e91734f95a 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 46.392 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LK04_RS00715 403e393636806f50b82176e91734f95a 406 SUPERFAMILY SSF53383 19 402 5.5E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS00715 403e393636806f50b82176e91734f95a 406 Pfam PF00202 Aminotransferase class-III 24 400 4.8E-132 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS00715 403e393636806f50b82176e91734f95a 406 Gene3D G3DSA:3.90.1150.10 307 402 8.6E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS00715 403e393636806f50b82176e91734f95a 406 Gene3D G3DSA:3.90.1150.10 12 60 8.6E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS00715 403e393636806f50b82176e91734f95a 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 401 4.3E-155 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LK04_RS00715 403e393636806f50b82176e91734f95a 406 PANTHER PTHR11986:SF71 1 406 1.2E-219 T 22-04-2016 LK04_RS00715 403e393636806f50b82176e91734f95a 406 Gene3D G3DSA:3.40.640.10 61 303 3.5E-92 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS00715 403e393636806f50b82176e91734f95a 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 403 1.2E-203 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 ProSitePatterns PS00211 ABC transporters family signature. 419 433 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 Gene3D G3DSA:3.40.50.300 2 252 1.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 Gene3D G3DSA:3.40.50.300 267 520 3.1E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 SMART SM00382 304 495 7.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 SMART SM00382 28 228 7.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 498 522 0.034 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 257 0.0036 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 SUPERFAMILY SSF52540 3 250 1.92E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 PANTHER PTHR24220:SF574 5 404 5.4E-194 T 22-04-2016 LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 SUPERFAMILY SSF52540 268 518 1.65E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 PANTHER PTHR24220 5 404 5.4E-194 T 22-04-2016 LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 Pfam PF00005 ABC transporter 20 178 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS05715 c0efee68189a87f35c450164cf78409d 528 Pfam PF00005 ABC transporter 295 447 9.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS01485 cf90954fae7bc14a52b17d7726fb46f9 149 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 4 149 18.224 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame LK04_RS01485 cf90954fae7bc14a52b17d7726fb46f9 149 PANTHER PTHR38452:SF1 1 146 2.1E-57 T 22-04-2016 LK04_RS01485 cf90954fae7bc14a52b17d7726fb46f9 149 Pfam PF04284 Protein of unknown function (DUF441) 8 145 4.3E-48 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame LK04_RS01485 cf90954fae7bc14a52b17d7726fb46f9 149 PANTHER PTHR38452 1 146 2.1E-57 T 22-04-2016 LK04_RS01485 cf90954fae7bc14a52b17d7726fb46f9 149 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 18 131 3.0E-32 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame LK04_RS12390 12986245d93a948c4b474f34a1bf9001 251 Gene3D G3DSA:3.40.50.720 5 249 2.5E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS12390 12986245d93a948c4b474f34a1bf9001 251 PANTHER PTHR10953 3 250 8.3E-88 T 22-04-2016 LK04_RS12390 12986245d93a948c4b474f34a1bf9001 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 2.4E-124 T 22-04-2016 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12390 12986245d93a948c4b474f34a1bf9001 251 SUPERFAMILY SSF69572 5 249 1.2E-85 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LK04_RS12390 12986245d93a948c4b474f34a1bf9001 251 Pfam PF00899 ThiF family 13 245 2.0E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 Gene3D G3DSA:3.30.63.10 43 87 2.8E-28 T 22-04-2016 LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 Gene3D G3DSA:3.40.50.300 1 17 5.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 Gene3D G3DSA:3.40.50.300 88 204 5.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.868 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 Gene3D G3DSA:3.40.50.300 18 42 5.0E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 SMART SM00072 3 187 4.1E-81 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 Pfam PF00625 Guanylate kinase 5 186 7.3E-67 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 SUPERFAMILY SSF52540 3 190 5.86E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 PANTHER PTHR23117 1 204 1.7E-104 T 22-04-2016 LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.0E-74 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LK04_RS19280 7e5a1e5433a700975ee54e0a0399869c 207 PANTHER PTHR23117:SF13 1 204 1.7E-104 T 22-04-2016 LK04_RS05965 dc28c74ac1b1e913425d42e5d0e7c2de 373 PANTHER PTHR22604 1 373 8.6E-92 T 22-04-2016 LK04_RS05965 dc28c74ac1b1e913425d42e5d0e7c2de 373 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 265 1.8E-8 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS05965 dc28c74ac1b1e913425d42e5d0e7c2de 373 Gene3D G3DSA:3.30.360.10 325 373 8.8E-46 T 22-04-2016 LK04_RS05965 dc28c74ac1b1e913425d42e5d0e7c2de 373 Gene3D G3DSA:3.30.360.10 150 277 8.8E-46 T 22-04-2016 LK04_RS05965 dc28c74ac1b1e913425d42e5d0e7c2de 373 SUPERFAMILY SSF55347 135 308 6.38E-38 T 22-04-2016 LK04_RS05965 dc28c74ac1b1e913425d42e5d0e7c2de 373 Gene3D G3DSA:3.40.50.720 1 149 1.1E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05965 dc28c74ac1b1e913425d42e5d0e7c2de 373 PANTHER PTHR22604:SF123 1 373 8.6E-92 T 22-04-2016 LK04_RS05965 dc28c74ac1b1e913425d42e5d0e7c2de 373 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 1.9E-24 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS05965 dc28c74ac1b1e913425d42e5d0e7c2de 373 SUPERFAMILY SSF51735 3 158 1.31E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS12885 d0788760582f3e09c372c3d18372ba28 383 Gene3D G3DSA:3.40.640.10 57 270 8.1E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS12885 d0788760582f3e09c372c3d18372ba28 383 Pfam PF00155 Aminotransferase class I and II 43 378 2.2E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS12885 d0788760582f3e09c372c3d18372ba28 383 PANTHER PTHR13693 4 382 2.0E-163 T 22-04-2016 LK04_RS12885 d0788760582f3e09c372c3d18372ba28 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 LK04_RS12885 d0788760582f3e09c372c3d18372ba28 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 48.102 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 LK04_RS12885 d0788760582f3e09c372c3d18372ba28 383 PANTHER PTHR13693:SF53 4 382 2.0E-163 T 22-04-2016 LK04_RS12885 d0788760582f3e09c372c3d18372ba28 383 SUPERFAMILY SSF53383 4 380 2.36E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS12885 d0788760582f3e09c372c3d18372ba28 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 378 1.3E-137 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 LK04_RS12885 d0788760582f3e09c372c3d18372ba28 383 Gene3D G3DSA:3.90.1150.10 271 380 2.6E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 Gene3D G3DSA:2.40.160.10 23 363 8.1E-96 T 22-04-2016 IPR023614 Porin domain LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PANTHER PTHR34501 3 363 6.6E-178 T 22-04-2016 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 318 335 5.6E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 5.6E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 5.6E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 238 250 5.6E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 99 109 5.6E-15 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PANTHER PTHR34501:SF4 3 363 6.6E-178 T 22-04-2016 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 Pfam PF00267 Gram-negative porin 28 363 6.9E-126 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 3.7E-57 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 153 175 3.7E-57 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 273 292 3.7E-57 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 244 261 3.7E-57 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 99 121 3.7E-57 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 53 71 3.7E-57 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS10580 47a8feae26f2bf50c9408638ff9dc8cd 363 SUPERFAMILY SSF56935 23 363 2.54E-75 T 22-04-2016 LK04_RS09450 ec9e412332e75b39ea624f468ec47bd0 241 PANTHER PTHR13887:SF25 14 240 3.0E-54 T 22-04-2016 LK04_RS09450 ec9e412332e75b39ea624f468ec47bd0 241 Gene3D G3DSA:3.40.30.10 71 238 6.7E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS09450 ec9e412332e75b39ea624f468ec47bd0 241 PANTHER PTHR13887 14 240 3.0E-54 T 22-04-2016 LK04_RS09450 ec9e412332e75b39ea624f468ec47bd0 241 Pfam PF13462 Thioredoxin 81 234 3.1E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS09450 ec9e412332e75b39ea624f468ec47bd0 241 SUPERFAMILY SSF52833 70 234 1.76E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 Gene3D G3DSA:3.40.50.2300 173 308 2.2E-54 T 22-04-2016 LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 PANTHER PTHR30146 1 327 1.5E-209 T 22-04-2016 LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 Pfam PF13377 Periplasmic binding protein-like domain 166 327 2.5E-45 T 22-04-2016 LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 SUPERFAMILY SSF47413 1 56 9.48E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 Gene3D G3DSA:1.10.260.40 1 50 6.7E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 SMART SM00354 1 68 1.6E-34 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 PANTHER PTHR30146:SF38 1 327 1.5E-209 T 22-04-2016 LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 Gene3D G3DSA:3.40.50.2300 51 172 8.3E-43 T 22-04-2016 LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 3.0E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19125 7f4ce8e916dae9ced1410ab6a311f532 327 SUPERFAMILY SSF53822 57 327 2.36E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS01920 0765501fd4e355a4382938cbc55e3ca8 119 Gene3D G3DSA:3.30.1130.10 1 114 5.0E-41 T 22-04-2016 LK04_RS01920 0765501fd4e355a4382938cbc55e3ca8 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.2E-29 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LK04_RS01920 0765501fd4e355a4382938cbc55e3ca8 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 1.7E-37 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LK04_RS01920 0765501fd4e355a4382938cbc55e3ca8 119 SUPERFAMILY SSF55620 1 115 5.08E-36 T 22-04-2016 LK04_RS01920 0765501fd4e355a4382938cbc55e3ca8 119 SMART SM00905 4 114 4.2E-45 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LK04_RS01920 0765501fd4e355a4382938cbc55e3ca8 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 4.7E-31 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LK04_RS01920 0765501fd4e355a4382938cbc55e3ca8 119 PANTHER PTHR20941 1 115 4.0E-34 T 22-04-2016 LK04_RS19230 4ed6b0b9ae101c798732ddea904350c4 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.1E-68 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LK04_RS19230 4ed6b0b9ae101c798732ddea904350c4 145 PANTHER PTHR10472 2 144 1.2E-70 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LK04_RS19230 4ed6b0b9ae101c798732ddea904350c4 145 SUPERFAMILY SSF69500 1 144 4.05E-55 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain LK04_RS19230 4ed6b0b9ae101c798732ddea904350c4 145 Gene3D G3DSA:3.50.80.10 1 144 7.3E-55 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain LK04_RS19230 4ed6b0b9ae101c798732ddea904350c4 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.147 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LK04_RS19230 4ed6b0b9ae101c798732ddea904350c4 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 4.4E-50 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 Gene3D G3DSA:3.30.450.20 20 114 1.1E-23 T 22-04-2016 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 Gene3D G3DSA:1.10.287.950 282 486 3.7E-56 T 22-04-2016 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 513 3.2E-55 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 SMART SM00283 267 514 1.9E-84 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 Pfam PF08447 PAS fold 31 114 1.3E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 3.1E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 3.1E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 3.1E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 3.1E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 PANTHER PTHR32089 188 514 2.7E-117 T 22-04-2016 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 PANTHER PTHR32089 48 168 2.7E-117 T 22-04-2016 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 SUPERFAMILY SSF55785 21 114 3.66E-26 T 22-04-2016 IPR000014 PAS domain LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 SUPERFAMILY SSF58104 242 514 4.05E-66 T 22-04-2016 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 SMART SM00091 8 74 4.2E-4 T 22-04-2016 IPR000014 PAS domain LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 114 1.3E-13 T 22-04-2016 IPR000014 PAS domain LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 PANTHER PTHR32089:SF64 188 514 2.7E-117 T 22-04-2016 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 PANTHER PTHR32089:SF64 48 168 2.7E-117 T 22-04-2016 LK04_RS17135 81de006489673214b9ee0918cf12bc20 514 SMART SM00086 80 121 0.0063 T 22-04-2016 IPR001610 PAC motif LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 SUPERFAMILY SSF160996 175 323 5.89E-44 T 22-04-2016 LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 PANTHER PTHR10617:SF103 1 271 3.3E-119 T 22-04-2016 LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 PANTHER PTHR10617:SF103 315 379 3.3E-119 T 22-04-2016 LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 Gene3D G3DSA:3.50.50.60 324 378 1.7E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 Gene3D G3DSA:3.50.50.60 1 171 1.7E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 1 377 3.1E-121 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 PANTHER PTHR10617 1 271 3.3E-119 T 22-04-2016 LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 PANTHER PTHR10617 315 379 3.3E-119 T 22-04-2016 LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 Gene3D G3DSA:1.10.8.260 254 307 7.9E-24 T 22-04-2016 IPR023166 HI0933 insert-like domain LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 Pfam PF03486 HI0933-like protein 1 377 4.0E-147 T 22-04-2016 LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 SUPERFAMILY SSF51905 1 173 2.73E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 SUPERFAMILY SSF51905 322 379 2.73E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00345 af50189199eb9e9596cfc19879ae7ce2 379 Gene3D G3DSA:2.40.30.10 173 253 6.0E-27 T 22-04-2016 LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 Gene3D G3DSA:3.30.160.20 153 223 1.1E-27 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 4.5E-14 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.432 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 SMART SM00535 21 149 2.9E-59 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 SUPERFAMILY SSF54768 109 225 6.95E-28 T 22-04-2016 LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 PANTHER PTHR11207 6 223 2.0E-110 T 22-04-2016 LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 SUPERFAMILY SSF69065 5 159 2.62E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 SMART SM00358 156 224 1.3E-22 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 Pfam PF14622 Ribonuclease-III-like 20 142 7.1E-34 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 2.2E-73 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 LK04_RS04030 485dc1a5b63182353420558c334bbe90 226 Gene3D G3DSA:1.10.1520.10 6 148 1.2E-48 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 Pfam PF01266 FAD dependent oxidoreductase 269 635 3.8E-45 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 PANTHER PTHR13847:SF182 606 667 5.8E-150 T 22-04-2016 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 SUPERFAMILY SSF51905 267 541 2.72E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 660 28.431 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 Gene3D G3DSA:3.40.50.150 10 248 2.2E-101 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 PANTHER PTHR13847 606 667 5.8E-150 T 22-04-2016 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 PANTHER PTHR13847:SF182 226 585 5.8E-150 T 22-04-2016 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 Gene3D G3DSA:3.50.50.60 597 656 1.3E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 Gene3D G3DSA:3.50.50.60 266 344 1.3E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 Gene3D G3DSA:3.50.50.60 396 475 1.3E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 665 5.4E-150 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 2.9E-49 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 PANTHER PTHR13847 226 585 5.8E-150 T 22-04-2016 LK04_RS05305 34d9fa5a4877f22a47737c94cb1272a2 670 SUPERFAMILY SSF53335 138 241 7.77E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS09245 eec4d12b74ab7169cdc95265f23836f4 258 PANTHER PTHR13832 3 215 2.5E-25 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 LK04_RS09245 eec4d12b74ab7169cdc95265f23836f4 258 SMART SM00331 9 234 8.1E-4 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS09245 eec4d12b74ab7169cdc95265f23836f4 258 PANTHER PTHR13832:SF278 3 215 2.5E-25 T 22-04-2016 LK04_RS09245 eec4d12b74ab7169cdc95265f23836f4 258 Pfam PF13672 Protein phosphatase 2C 9 203 2.1E-15 T 22-04-2016 LK04_RS09245 eec4d12b74ab7169cdc95265f23836f4 258 SMART SM00332 1 232 1.5E-5 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS09245 eec4d12b74ab7169cdc95265f23836f4 258 SUPERFAMILY SSF81606 1 234 2.22E-41 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS09245 eec4d12b74ab7169cdc95265f23836f4 258 Gene3D G3DSA:3.60.40.10 2 233 9.7E-43 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 PANTHER PTHR32089 1 519 3.5E-189 T 22-04-2016 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 PANTHER PTHR32089:SF48 1 519 3.5E-189 T 22-04-2016 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 Gene3D G3DSA:1.10.287.950 284 488 1.7E-64 T 22-04-2016 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 Pfam PF00672 HAMP domain 196 263 8.1E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 SUPERFAMILY SSF47170 25 179 4.84E-31 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 SMART SM00283 269 516 3.6E-98 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 SUPERFAMILY SSF58104 236 517 6.67E-75 T 22-04-2016 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 1.3E-65 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 Gene3D G3DSA:1.20.120.30 37 179 1.2E-34 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.7E-81 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.7E-81 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.7E-81 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.7E-81 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.7E-81 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.7E-81 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.7E-81 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 SMART SM00304 216 268 1.7E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 Pfam PF02203 Tar ligand binding domain homologue 1 175 6.6E-36 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS12355 184604792cfae9abe35af1a5f0d803e5 555 SMART SM00319 44 182 3.3E-31 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS12280 0e176e6ee68b941d9e6e58cc5489c8aa 300 PANTHER PTHR21621 1 288 2.5E-121 T 22-04-2016 LK04_RS12280 0e176e6ee68b941d9e6e58cc5489c8aa 300 SUPERFAMILY SSF56059 98 288 2.69E-48 T 22-04-2016 LK04_RS12280 0e176e6ee68b941d9e6e58cc5489c8aa 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 3.0E-74 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type LK04_RS12280 0e176e6ee68b941d9e6e58cc5489c8aa 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.996 T 22-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK LK04_RS12280 0e176e6ee68b941d9e6e58cc5489c8aa 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.4E-91 T 22-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 LK04_RS12280 0e176e6ee68b941d9e6e58cc5489c8aa 300 Gene3D G3DSA:3.30.1490.20 104 173 2.2E-7 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS12280 0e176e6ee68b941d9e6e58cc5489c8aa 300 Gene3D G3DSA:3.40.50.20 7 103 5.2E-18 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS12280 0e176e6ee68b941d9e6e58cc5489c8aa 300 PANTHER PTHR21621:SF0 1 288 2.5E-121 T 22-04-2016 LK04_RS12280 0e176e6ee68b941d9e6e58cc5489c8aa 300 Gene3D G3DSA:3.30.470.20 174 277 1.7E-36 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS15185 1de2617214e83c73c7179323695facf3 326 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 326 4.4E-109 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 LK04_RS15185 1de2617214e83c73c7179323695facf3 326 Gene3D G3DSA:3.40.718.10 3 326 2.3E-123 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS15185 1de2617214e83c73c7179323695facf3 326 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 9.5E-102 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 LK04_RS15185 1de2617214e83c73c7179323695facf3 326 SUPERFAMILY SSF53659 3 326 5.91E-105 T 22-04-2016 LK04_RS15185 1de2617214e83c73c7179323695facf3 326 PANTHER PTHR30004:SF6 2 326 6.8E-151 T 22-04-2016 LK04_RS15185 1de2617214e83c73c7179323695facf3 326 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 326 35.157 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 LK04_RS15185 1de2617214e83c73c7179323695facf3 326 PANTHER PTHR30004 2 326 6.8E-151 T 22-04-2016 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 Gene3D G3DSA:3.40.710.10 40 291 6.1E-95 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 2.5E-99 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 SMART SM00936 292 383 4.0E-34 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 SUPERFAMILY SSF69189 292 385 1.18E-25 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 Gene3D G3DSA:2.60.410.10 292 383 6.8E-33 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 PANTHER PTHR21581 37 403 1.0E-220 T 22-04-2016 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 2.1E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 2.1E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 2.1E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 PANTHER PTHR21581:SF4 37 403 1.0E-220 T 22-04-2016 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 2.7E-25 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS13395 c11ae1c366ddbd19ab4ae9d05879d253 403 SUPERFAMILY SSF56601 17 292 7.67E-79 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS01260 e94ed38470e42573a19a67c88474aa5a 87 SUPERFAMILY SSF159871 4 87 6.28E-28 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS01260 e94ed38470e42573a19a67c88474aa5a 87 Gene3D G3DSA:3.30.1660.10 18 87 8.7E-31 T 22-04-2016 IPR025543 Dodecin-like LK04_RS01260 e94ed38470e42573a19a67c88474aa5a 87 PANTHER PTHR34156 2 87 1.6E-47 T 22-04-2016 LK04_RS01260 e94ed38470e42573a19a67c88474aa5a 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 3.8E-23 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS01260 e94ed38470e42573a19a67c88474aa5a 87 PANTHER PTHR34156:SF5 2 87 1.6E-47 T 22-04-2016 LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 SUPERFAMILY SSF52540 8 237 2.31E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 Pfam PF00005 ABC transporter 25 177 4.8E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 Pfam PF00005 ABC transporter 277 431 2.6E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 Gene3D G3DSA:3.40.50.300 7 239 3.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 SMART SM00382 34 225 2.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 SMART SM00382 285 488 0.32 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 PANTHER PTHR24220 11 385 7.8E-184 T 22-04-2016 LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 PANTHER PTHR24220:SF538 11 385 7.8E-184 T 22-04-2016 LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 Gene3D G3DSA:3.40.50.300 264 494 1.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04545 833eae5ef7253fca296dbf57b235b46e 501 SUPERFAMILY SSF52540 265 492 1.07E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15505 7350febdb9d90cca92909e422f5aa77e 528 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 1 516 4.2E-241 T 22-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 LK04_RS15505 7350febdb9d90cca92909e422f5aa77e 528 SUPERFAMILY SSF161098 12 257 5.23E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS15505 7350febdb9d90cca92909e422f5aa77e 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 362 515 3.4E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS15505 7350febdb9d90cca92909e422f5aa77e 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 253 5.1E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS15505 7350febdb9d90cca92909e422f5aa77e 528 Gene3D G3DSA:1.10.3720.10 285 523 1.6E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS15505 7350febdb9d90cca92909e422f5aa77e 528 Gene3D G3DSA:1.10.3720.10 11 259 5.7E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS15505 7350febdb9d90cca92909e422f5aa77e 528 PANTHER PTHR30183 1 527 2.0E-260 T 22-04-2016 LK04_RS15505 7350febdb9d90cca92909e422f5aa77e 528 PANTHER PTHR30183:SF8 1 527 2.0E-260 T 22-04-2016 LK04_RS15505 7350febdb9d90cca92909e422f5aa77e 528 SUPERFAMILY SSF161098 277 519 7.59E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS15300 3c8d54ae5c42caf9a548c8c5cf149704 468 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 22-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 LK04_RS15300 3c8d54ae5c42caf9a548c8c5cf149704 468 PANTHER PTHR11328:SF24 1 452 3.4E-169 T 22-04-2016 LK04_RS15300 3c8d54ae5c42caf9a548c8c5cf149704 468 Gene3D G3DSA:1.20.1250.20 221 414 3.1E-9 T 22-04-2016 LK04_RS15300 3c8d54ae5c42caf9a548c8c5cf149704 468 Gene3D G3DSA:1.20.1250.20 19 212 3.5E-18 T 22-04-2016 LK04_RS15300 3c8d54ae5c42caf9a548c8c5cf149704 468 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 2.9E-125 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LK04_RS15300 3c8d54ae5c42caf9a548c8c5cf149704 468 Pfam PF13347 MFS/sugar transport protein 13 432 3.4E-108 T 22-04-2016 LK04_RS15300 3c8d54ae5c42caf9a548c8c5cf149704 468 SUPERFAMILY SSF103473 13 423 5.75E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS15300 3c8d54ae5c42caf9a548c8c5cf149704 468 PANTHER PTHR11328 1 452 3.4E-169 T 22-04-2016 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 SUPERFAMILY SSF56762 224 599 2.62E-117 T 22-04-2016 IPR029014 NiFe hydrogenase-like LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 5.9E-44 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 Gene3D G3DSA:1.10.645.10 214 431 5.9E-35 T 22-04-2016 IPR029014 NiFe hydrogenase-like LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 188 25.028 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 Gene3D G3DSA:1.10.645.10 432 579 2.8E-11 T 22-04-2016 IPR029014 NiFe hydrogenase-like LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 177 2.2E-40 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 599 71.894 T 22-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 599 1.5E-101 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 PANTHER PTHR11993 146 594 2.7E-302 T 22-04-2016 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 599 41.791 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 SUPERFAMILY SSF143243 24 228 3.66E-59 T 22-04-2016 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 PANTHER PTHR11993:SF28 146 594 2.7E-302 T 22-04-2016 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 599 2.7E-173 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 LK04_RS05500 8c9e7674795ad62e2c34a6ffa6709e3a 599 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 159 2.0E-22 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 SUPERFAMILY SSF50621 251 416 2.93E-54 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PANTHER PTHR11482:SF5 16 415 9.2E-143 T 22-04-2016 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 415 4.1E-125 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 Gene3D G3DSA:3.20.20.10 47 261 3.2E-62 T 22-04-2016 IPR029066 PLP-binding barrel LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 212 227 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PANTHER PTHR11482 16 415 9.2E-143 T 22-04-2016 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 278 392 7.8E-17 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 Gene3D G3DSA:2.40.37.10 262 416 1.9E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 416 37.572 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 SUPERFAMILY SSF51419 27 275 4.07E-55 T 22-04-2016 IPR029066 PLP-binding barrel LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 291 309 4.8E-23 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 155 164 4.8E-23 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 383 405 4.8E-23 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 4.8E-23 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 1.8E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 180 193 1.8E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 1.8E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 373 386 1.8E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 282 1.8E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LK04_RS03105 a59341782d8f029d0d1b5375ffcd30e5 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 273 2.0E-56 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 Gene3D G3DSA:1.10.10.60 138 191 2.4E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 Pfam PF02805 Metal binding domain of Ada 8 70 1.8E-28 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 SMART SM00342 100 183 2.1E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 137 179 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 Gene3D G3DSA:3.30.310.20 200 316 1.3E-39 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 SUPERFAMILY SSF46689 136 187 4.48E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 SUPERFAMILY SSF48150 305 480 1.12E-42 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 SUPERFAMILY SSF57884 2 76 9.94E-30 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 Pfam PF06029 AlkA N-terminal domain 200 316 9.0E-40 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 SMART SM00478 326 482 1.9E-12 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 SMART SM01009 199 316 7.3E-55 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 Gene3D G3DSA:1.10.340.30 317 436 7.5E-34 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 PANTHER PTHR10242 51 242 2.2E-80 T 22-04-2016 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 PANTHER PTHR10242 263 481 2.2E-80 T 22-04-2016 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 322 451 6.8E-10 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 Gene3D G3DSA:1.10.10.60 78 137 4.6E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 Pfam PF12833 Helix-turn-helix domain 106 185 6.0E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 Gene3D G3DSA:1.10.1670.10 437 482 3.2E-16 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 Gene3D G3DSA:3.40.10.10 3 74 4.3E-30 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 PANTHER PTHR10242:SF3 51 242 2.2E-80 T 22-04-2016 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 PANTHER PTHR10242:SF3 263 481 2.2E-80 T 22-04-2016 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 420 444 - T 22-04-2016 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 LK04_RS13000 dd7cf8c60f0bf710e3cb60d720ee35e4 495 SUPERFAMILY SSF55945 200 297 1.96E-30 T 22-04-2016 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 Pfam PF00072 Response regulator receiver domain 5 115 1.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 ProSitePatterns PS00622 LuxR-type HTH domain signature. 150 177 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 SMART SM00448 2 115 3.0E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 SMART SM00421 133 190 4.0E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 3.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 3.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 3.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 188 4.8E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 SUPERFAMILY SSF46894 125 190 7.14E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 SUPERFAMILY SSF52172 2 128 9.68E-28 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 PANTHER PTHR26402 2 187 1.8E-46 T 22-04-2016 LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 Gene3D G3DSA:1.10.10.10 141 190 6.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12970 daa0e84b6f8aaf1abeb9c1d8747369e9 194 Gene3D G3DSA:3.40.50.2300 2 140 3.0E-29 T 22-04-2016 LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 PANTHER PTHR20854 1 245 3.1E-82 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 Pfam PF00459 Inositol monophosphatase family 6 235 8.8E-48 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 SUPERFAMILY SSF56655 1 244 2.49E-73 T 22-04-2016 LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 PANTHER PTHR20854:SF5 1 245 3.1E-82 T 22-04-2016 LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 PRINTS PR00377 Inositol monophosphatase superfamily signature 57 73 3.0E-5 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 PRINTS PR00377 Inositol monophosphatase superfamily signature 35 55 3.0E-5 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 3.0E-5 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 246 3.8E-106 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 Gene3D G3DSA:3.30.540.10 2 147 6.8E-46 T 22-04-2016 LK04_RS01445 00aefc5dd60749d73d9d159f064fad9d 248 Gene3D G3DSA:3.40.190.80 148 245 1.5E-37 T 22-04-2016 LK04_RS09130 948acd7b8aed043efb77fe7c4fe276d6 338 SUPERFAMILY SSF55681 3 247 1.49E-75 T 22-04-2016 LK04_RS09130 948acd7b8aed043efb77fe7c4fe276d6 338 SUPERFAMILY SSF82649 248 337 8.89E-24 T 22-04-2016 LK04_RS09130 948acd7b8aed043efb77fe7c4fe276d6 338 Gene3D G3DSA:3.90.1550.10 1 247 2.6E-80 T 22-04-2016 LK04_RS09130 948acd7b8aed043efb77fe7c4fe276d6 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 1 328 1.1E-121 T 22-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 LK04_RS09130 948acd7b8aed043efb77fe7c4fe276d6 338 PANTHER PTHR12561 1 338 5.3E-221 T 22-04-2016 LK04_RS09130 948acd7b8aed043efb77fe7c4fe276d6 338 PANTHER PTHR12561:SF5 1 338 5.3E-221 T 22-04-2016 LK04_RS09130 948acd7b8aed043efb77fe7c4fe276d6 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 1.5E-18 T 22-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 LK04_RS09130 948acd7b8aed043efb77fe7c4fe276d6 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 53 156 2.5E-6 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LK04_RS09130 948acd7b8aed043efb77fe7c4fe276d6 338 Gene3D G3DSA:3.30.390.50 249 333 2.7E-14 T 22-04-2016 LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 Gene3D G3DSA:3.30.70.920 55 139 3.8E-31 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 PANTHER PTHR30154:SF17 1 151 3.6E-98 T 22-04-2016 LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 SUPERFAMILY SSF54909 62 151 1.61E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 Gene3D G3DSA:1.10.10.10 3 54 4.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.9E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.9E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.9E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 PANTHER PTHR30154 1 151 3.6E-98 T 22-04-2016 LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 SMART SM00344 2 111 3.8E-37 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 SUPERFAMILY SSF46785 2 92 5.19E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 2.7E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LK04_RS13925 a13e6621b794a457d23d49512f9be922 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 1.0E-15 T 22-04-2016 LK04_RS01720 0cdf106a28499cb7693804f7dd277c06 372 PIRSF PIRSF037565 1 371 4.6E-156 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS01720 0cdf106a28499cb7693804f7dd277c06 372 SUPERFAMILY SSF53335 187 367 3.46E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS01720 0cdf106a28499cb7693804f7dd277c06 372 PANTHER PTHR18895:SF6 76 371 1.8E-143 T 22-04-2016 LK04_RS01720 0cdf106a28499cb7693804f7dd277c06 372 Gene3D G3DSA:3.40.50.150 194 369 1.4E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS01720 0cdf106a28499cb7693804f7dd277c06 372 Pfam PF05175 Methyltransferase small domain 196 367 5.8E-56 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LK04_RS01720 0cdf106a28499cb7693804f7dd277c06 372 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 370 49.296 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS01720 0cdf106a28499cb7693804f7dd277c06 372 PANTHER PTHR18895 76 371 1.8E-143 T 22-04-2016 LK04_RS01720 0cdf106a28499cb7693804f7dd277c06 372 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 299 305 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS12010 e746464a3e3ada5b2033c01ea1912119 244 Pfam PF04288 MukE-like family 10 233 7.1E-125 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 LK04_RS12010 e746464a3e3ada5b2033c01ea1912119 244 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 242 49.749 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 LK04_RS07030 08092389febc58c0721f47645924ed54 135 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 127 2.7E-47 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 LK04_RS07030 08092389febc58c0721f47645924ed54 135 PIRSF PIRSF039090 1 135 4.3E-41 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 LK04_RS07030 08092389febc58c0721f47645924ed54 135 SUPERFAMILY SSF101116 9 127 6.28E-34 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 LK04_RS07030 08092389febc58c0721f47645924ed54 135 Gene3D G3DSA:1.20.120.340 8 129 2.9E-38 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 LK04_RS07030 08092389febc58c0721f47645924ed54 135 Pfam PF02561 Flagellar protein FliS 8 125 5.3E-34 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 LK04_RS07030 08092389febc58c0721f47645924ed54 135 PANTHER PTHR34773 1 127 1.7E-43 T 22-04-2016 LK04_RS04295 c1458d3d9d4f3dba2ef0746b497210b8 199 PANTHER PTHR10108 1 185 7.5E-67 T 22-04-2016 LK04_RS04295 c1458d3d9d4f3dba2ef0746b497210b8 199 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 3 196 7.4E-79 T 22-04-2016 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 LK04_RS04295 c1458d3d9d4f3dba2ef0746b497210b8 199 Gene3D G3DSA:3.40.50.150 17 196 1.2E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS04295 c1458d3d9d4f3dba2ef0746b497210b8 199 SUPERFAMILY SSF53335 12 196 9.43E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS04295 c1458d3d9d4f3dba2ef0746b497210b8 199 Pfam PF03848 Tellurite resistance protein TehB 3 193 3.5E-84 T 22-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain LK04_RS04295 c1458d3d9d4f3dba2ef0746b497210b8 199 PANTHER PTHR10108:SF927 1 185 7.5E-67 T 22-04-2016 LK04_RS08305 e04093159b06b6e355855dfc20339106 327 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 39.563 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 LK04_RS08305 e04093159b06b6e355855dfc20339106 327 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 314 5.8E-178 T 22-04-2016 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 LK04_RS08305 e04093159b06b6e355855dfc20339106 327 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 3.8E-115 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 LK04_RS08305 e04093159b06b6e355855dfc20339106 327 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 314 2.0E-115 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 LK04_RS05335 525ab93cdcde265eb61eb02d8ac24a1b 301 SUPERFAMILY SSF103481 186 283 2.22E-15 T 22-04-2016 LK04_RS05335 525ab93cdcde265eb61eb02d8ac24a1b 301 SUPERFAMILY SSF103481 41 138 1.83E-12 T 22-04-2016 LK04_RS05335 525ab93cdcde265eb61eb02d8ac24a1b 301 PANTHER PTHR12715:SF12 3 296 1.5E-92 T 22-04-2016 LK04_RS05335 525ab93cdcde265eb61eb02d8ac24a1b 301 Pfam PF00892 EamA-like transporter family 151 280 2.2E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS05335 525ab93cdcde265eb61eb02d8ac24a1b 301 Pfam PF00892 EamA-like transporter family 4 135 5.1E-22 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS05335 525ab93cdcde265eb61eb02d8ac24a1b 301 PANTHER PTHR12715 3 296 1.5E-92 T 22-04-2016 LK04_RS08365 264a862e82430233b7a2b4e26bbf31f4 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 324 4.3E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS08365 264a862e82430233b7a2b4e26bbf31f4 331 SMART SM00382 32 246 4.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08365 264a862e82430233b7a2b4e26bbf31f4 331 PANTHER PTHR24220:SF514 5 329 1.4E-215 T 22-04-2016 LK04_RS08365 264a862e82430233b7a2b4e26bbf31f4 331 Gene3D G3DSA:3.40.50.300 2 263 4.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08365 264a862e82430233b7a2b4e26bbf31f4 331 PANTHER PTHR24220 5 329 1.4E-215 T 22-04-2016 LK04_RS08365 264a862e82430233b7a2b4e26bbf31f4 331 SUPERFAMILY SSF52540 3 266 6.43E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08365 264a862e82430233b7a2b4e26bbf31f4 331 Pfam PF00005 ABC transporter 24 188 7.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS08365 264a862e82430233b7a2b4e26bbf31f4 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 306 6.3E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS03185 4a33ab0d5b3b0cf5db91c84278711092 72 Gene3D G3DSA:2.30.30.100 19 72 2.1E-28 T 22-04-2016 LK04_RS03185 4a33ab0d5b3b0cf5db91c84278711092 72 PANTHER PTHR37011:SF1 1 72 2.8E-30 T 22-04-2016 LK04_RS03185 4a33ab0d5b3b0cf5db91c84278711092 72 PANTHER PTHR37011 1 72 2.8E-30 T 22-04-2016 LK04_RS03185 4a33ab0d5b3b0cf5db91c84278711092 72 SUPERFAMILY SSF50182 21 71 1.04E-17 T 22-04-2016 IPR010920 LSM domain LK04_RS03185 4a33ab0d5b3b0cf5db91c84278711092 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 5.9E-23 T 22-04-2016 IPR010305 Protein of unknown function DUF903 LK04_RS02210 a1b8331ba8a1b26ee217c0af55a81476 580 Gene3D G3DSA:1.10.3720.10 24 292 1.0E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02210 a1b8331ba8a1b26ee217c0af55a81476 580 SUPERFAMILY SSF161098 24 291 1.57E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02210 a1b8331ba8a1b26ee217c0af55a81476 580 SUPERFAMILY SSF161098 313 570 2.49E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02210 a1b8331ba8a1b26ee217c0af55a81476 580 Gene3D G3DSA:1.10.3720.10 317 564 1.4E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02210 a1b8331ba8a1b26ee217c0af55a81476 580 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 388 571 1.5E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02210 a1b8331ba8a1b26ee217c0af55a81476 580 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 296 8.5E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02210 a1b8331ba8a1b26ee217c0af55a81476 580 PANTHER PTHR30183 14 574 9.6E-42 T 22-04-2016 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 SUPERFAMILY SSF52540 134 342 8.99E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 465 34.434 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 PANTHER PTHR30050:SF2 129 466 7.3E-246 T 22-04-2016 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 PANTHER PTHR30050:SF2 1 101 7.3E-246 T 22-04-2016 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 Gene3D G3DSA:1.10.1750.10 365 465 2.6E-42 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 SMART SM00382 163 365 3.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 464 4.9E-186 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 Gene3D G3DSA:3.40.50.300 122 295 1.4E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 Gene3D G3DSA:1.10.8.60 297 364 5.6E-30 T 22-04-2016 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 Pfam PF00308 Bacterial dnaA protein 132 348 1.5E-98 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 375 443 4.1E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 PANTHER PTHR30050 129 466 7.3E-246 T 22-04-2016 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 PANTHER PTHR30050 1 101 7.3E-246 T 22-04-2016 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 SMART SM00760 374 443 1.3E-43 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 164 184 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 196 210 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 262 289 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 424 443 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 228 242 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 SUPERFAMILY SSF48295 362 465 1.33E-37 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 ProSitePatterns PS01008 DnaA protein signature. 424 443 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LK04_RS18760 e9c48075fb6c1d796ffaa5f19d862450 466 Pfam PF11638 DnaA N-terminal domain 4 64 2.8E-20 T 22-04-2016 IPR024633 DnaA N-terminal domain LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 SUPERFAMILY SSF55874 285 450 3.8E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 SMART SM00304 176 231 2.1E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 SUPERFAMILY SSF158472 177 229 2.22E-7 T 22-04-2016 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 SMART SM00387 341 451 1.3E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 SUPERFAMILY SSF47384 215 295 1.16E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 Gene3D G3DSA:3.30.565.10 301 449 6.1E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 448 6.3E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 Gene3D G3DSA:1.10.287.130 222 291 5.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 PANTHER PTHR24423:SF564 170 452 9.5E-94 T 22-04-2016 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 SMART SM00388 232 295 1.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 294 1.1E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 PANTHER PTHR24423 170 452 9.5E-94 T 22-04-2016 LK04_RS04645 4c989ed17d24261545a6daa51905a2a4 453 Pfam PF00672 HAMP domain 161 227 3.3E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS06855 3ef8a0f6699b6e7a2812c4ef309546a3 59 Pfam PF09926 Uncharacterized small protein (DUF2158) 7 48 1.4E-7 T 22-04-2016 IPR019226 Protein of unknown function DUF2158 LK04_RS15685 7bdc0742df3ce74dfa9baad1e5db925c 531 PANTHER PTHR37024:SF1 1 524 3.8E-126 T 22-04-2016 LK04_RS15685 7bdc0742df3ce74dfa9baad1e5db925c 531 PANTHER PTHR37024 1 524 3.8E-126 T 22-04-2016 LK04_RS15685 7bdc0742df3ce74dfa9baad1e5db925c 531 Pfam PF06812 ImpA, N-terminal, type VI secretion system 31 136 6.5E-21 T 22-04-2016 IPR010657 ImpA, N-terminal LK04_RS15685 7bdc0742df3ce74dfa9baad1e5db925c 531 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 225 487 4.1E-82 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 LK04_RS15685 7bdc0742df3ce74dfa9baad1e5db925c 531 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 27 487 1.0E-113 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 LK04_RS02890 da5432c60066bea144fe41863e8d4bd8 286 PANTHER PTHR30221:SF7 16 284 2.2E-109 T 22-04-2016 LK04_RS02890 da5432c60066bea144fe41863e8d4bd8 286 Pfam PF00924 Mechanosensitive ion channel 72 268 1.6E-55 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LK04_RS02890 da5432c60066bea144fe41863e8d4bd8 286 SUPERFAMILY SSF82689 181 279 9.68E-31 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LK04_RS02890 da5432c60066bea144fe41863e8d4bd8 286 Gene3D G3DSA:3.30.70.100 182 266 1.1E-26 T 22-04-2016 LK04_RS02890 da5432c60066bea144fe41863e8d4bd8 286 SUPERFAMILY SSF50182 114 179 2.29E-16 T 22-04-2016 IPR010920 LSM domain LK04_RS02890 da5432c60066bea144fe41863e8d4bd8 286 PANTHER PTHR30221 16 284 2.2E-109 T 22-04-2016 LK04_RS02890 da5432c60066bea144fe41863e8d4bd8 286 Gene3D G3DSA:2.30.30.60 129 178 2.6E-18 T 22-04-2016 LK04_RS02890 da5432c60066bea144fe41863e8d4bd8 286 SUPERFAMILY SSF82861 28 112 1.19E-17 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LK04_RS02890 da5432c60066bea144fe41863e8d4bd8 286 Pfam PF05552 Conserved TM helix 16 64 4.1E-13 T 22-04-2016 IPR008910 Conserved TM helix LK04_RS02890 da5432c60066bea144fe41863e8d4bd8 286 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 LK04_RS09330 1892ae66940e72f37688c9bc47448136 210 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 14 208 9.6E-76 T 22-04-2016 IPR017694 Phosphonate metabolim protein, transferase hexapeptide repeat family LK04_RS09330 1892ae66940e72f37688c9bc47448136 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 148 6.1E-10 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS09330 1892ae66940e72f37688c9bc47448136 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 122 150 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LK04_RS09330 1892ae66940e72f37688c9bc47448136 210 PANTHER PTHR23416 27 84 6.9E-43 T 22-04-2016 LK04_RS09330 1892ae66940e72f37688c9bc47448136 210 PANTHER PTHR23416 104 204 6.9E-43 T 22-04-2016 LK04_RS09330 1892ae66940e72f37688c9bc47448136 210 Gene3D G3DSA:2.160.10.10 20 205 5.4E-51 T 22-04-2016 LK04_RS09330 1892ae66940e72f37688c9bc47448136 210 PANTHER PTHR23416:SF61 27 84 6.9E-43 T 22-04-2016 LK04_RS09330 1892ae66940e72f37688c9bc47448136 210 PANTHER PTHR23416:SF61 104 204 6.9E-43 T 22-04-2016 LK04_RS09330 1892ae66940e72f37688c9bc47448136 210 SUPERFAMILY SSF51161 14 204 4.02E-42 T 22-04-2016 IPR011004 Trimeric LpxA-like LK04_RS03305 617d70ebb25e07a11523065d36e7e6e5 74 Gene3D G3DSA:2.30.30.100 19 72 4.2E-33 T 22-04-2016 LK04_RS03305 617d70ebb25e07a11523065d36e7e6e5 74 PANTHER PTHR37011 1 74 6.0E-38 T 22-04-2016 LK04_RS03305 617d70ebb25e07a11523065d36e7e6e5 74 SUPERFAMILY SSF50182 21 72 4.58E-20 T 22-04-2016 IPR010920 LSM domain LK04_RS03305 617d70ebb25e07a11523065d36e7e6e5 74 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 9.9E-26 T 22-04-2016 IPR010305 Protein of unknown function DUF903 LK04_RS03305 617d70ebb25e07a11523065d36e7e6e5 74 PANTHER PTHR37011:SF2 1 74 6.0E-38 T 22-04-2016 LK04_RS02905 f474155181c4a08272b6237f8ad919eb 232 SUPERFAMILY SSF46785 7 76 5.02E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02905 f474155181c4a08272b6237f8ad919eb 232 Gene3D G3DSA:1.10.10.10 5 76 1.3E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02905 f474155181c4a08272b6237f8ad919eb 232 SMART SM00346 6 95 0.0082 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS02905 f474155181c4a08272b6237f8ad919eb 232 SUPERFAMILY SSF55781 78 224 1.11E-6 T 22-04-2016 IPR029016 GAF domain-like LK04_RS02905 f474155181c4a08272b6237f8ad919eb 232 PANTHER PTHR30136:SF3 2 228 1.1E-32 T 22-04-2016 LK04_RS02905 f474155181c4a08272b6237f8ad919eb 232 PANTHER PTHR30136 2 228 1.1E-32 T 22-04-2016 LK04_RS02905 f474155181c4a08272b6237f8ad919eb 232 Gene3D G3DSA:3.30.450.40 99 169 4.9E-5 T 22-04-2016 IPR029016 GAF domain-like LK04_RS00320 fbaee13643910ff086a851a73f0e012a 680 SUPERFAMILY SSF55486 1 677 1.99E-216 T 22-04-2016 LK04_RS00320 fbaee13643910ff086a851a73f0e012a 680 PANTHER PTHR11804:SF8 3 678 0.0 T 22-04-2016 LK04_RS00320 fbaee13643910ff086a851a73f0e012a 680 PANTHER PTHR11804 3 678 0.0 T 22-04-2016 LK04_RS00320 fbaee13643910ff086a851a73f0e012a 680 Pfam PF01432 Peptidase family M3 222 677 3.7E-172 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 LK04_RS00320 fbaee13643910ff086a851a73f0e012a 680 Gene3D G3DSA:1.20.1050.40 7 138 1.0E-26 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal LK04_RS00320 fbaee13643910ff086a851a73f0e012a 680 Gene3D G3DSA:1.10.1370.10 505 679 1.7E-143 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LK04_RS00320 fbaee13643910ff086a851a73f0e012a 680 Gene3D G3DSA:1.10.1370.10 140 349 1.7E-143 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LK04_RS00320 fbaee13643910ff086a851a73f0e012a 680 Gene3D G3DSA:3.40.390.10 360 504 2.1E-60 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 Gene3D G3DSA:1.10.10.10 2 82 5.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 Gene3D G3DSA:3.40.190.10 87 188 3.0E-28 T 22-04-2016 LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 Gene3D G3DSA:3.40.190.10 189 262 3.7E-12 T 22-04-2016 LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 SUPERFAMILY SSF46785 2 109 3.75E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 Pfam PF03466 LysR substrate binding domain 86 288 5.6E-50 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 PANTHER PTHR30126 2 288 1.7E-183 T 22-04-2016 LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 PANTHER PTHR30126:SF36 2 288 1.7E-183 T 22-04-2016 LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.1E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05790 c2674b9eea03892d486d8a2e10e90e6f 288 SUPERFAMILY SSF53850 86 288 7.12E-46 T 22-04-2016 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 PANTHER PTHR11493 1 559 6.5E-271 T 22-04-2016 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 SUPERFAMILY SSF55124 13 142 1.44E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 Gene3D G3DSA:3.90.480.10 74 146 2.8E-64 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 Gene3D G3DSA:3.90.480.10 342 421 2.8E-64 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.375 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 SUPERFAMILY SSF56014 428 561 1.15E-33 T 22-04-2016 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 6.3E-291 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 Gene3D G3DSA:3.30.413.10 430 562 8.0E-34 T 22-04-2016 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 Gene3D G3DSA:3.30.413.10 150 339 2.0E-71 T 22-04-2016 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 PANTHER PTHR11493:SF47 1 559 6.5E-271 T 22-04-2016 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 SUPERFAMILY SSF56014 150 344 9.68E-60 T 22-04-2016 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 SUPERFAMILY SSF55124 346 421 1.25E-21 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 2.1E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 2.1E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 557 4.9E-4 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 328 9.5E-47 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 139 2.0E-12 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS03450 8810e82cb0ede8f0429d98defffb9312 574 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 1.9E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS19355 431fc6f3842b3273ebd04668e4f97cd6 238 PANTHER PTHR11953 1 238 2.4E-89 T 22-04-2016 LK04_RS19355 431fc6f3842b3273ebd04668e4f97cd6 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 9.5E-114 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 LK04_RS19355 431fc6f3842b3273ebd04668e4f97cd6 238 PANTHER PTHR11953:SF0 1 238 2.4E-89 T 22-04-2016 LK04_RS19355 431fc6f3842b3273ebd04668e4f97cd6 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 2.9E-11 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LK04_RS19355 431fc6f3842b3273ebd04668e4f97cd6 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site LK04_RS19355 431fc6f3842b3273ebd04668e4f97cd6 238 SUPERFAMILY SSF54211 1 181 8.1E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS19355 431fc6f3842b3273ebd04668e4f97cd6 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.4E-23 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 LK04_RS19355 431fc6f3842b3273ebd04668e4f97cd6 238 SUPERFAMILY SSF55666 153 236 1.44E-26 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LK04_RS19355 431fc6f3842b3273ebd04668e4f97cd6 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.456 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 LK04_RS19355 431fc6f3842b3273ebd04668e4f97cd6 238 Gene3D G3DSA:3.30.230.70 9 236 3.7E-35 T 22-04-2016 IPR027408 PNPase/RNase PH domain LK04_RS17725 1b5f4af32828420ff90cdcf5c96e6219 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS17725 1b5f4af32828420ff90cdcf5c96e6219 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS17725 1b5f4af32828420ff90cdcf5c96e6219 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS17725 1b5f4af32828420ff90cdcf5c96e6219 90 PANTHER PTHR33175 1 90 1.6E-59 T 22-04-2016 LK04_RS17725 1b5f4af32828420ff90cdcf5c96e6219 90 PANTHER PTHR33175:SF4 1 90 1.6E-59 T 22-04-2016 LK04_RS17725 1b5f4af32828420ff90cdcf5c96e6219 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.0E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS17725 1b5f4af32828420ff90cdcf5c96e6219 90 SUPERFAMILY SSF47729 1 90 6.48E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LK04_RS17725 1b5f4af32828420ff90cdcf5c96e6219 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LK04_RS17725 1b5f4af32828420ff90cdcf5c96e6219 90 SMART SM00411 1 90 1.5E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS17725 1b5f4af32828420ff90cdcf5c96e6219 90 Gene3D G3DSA:4.10.520.10 1 90 2.7E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LK04_RS16800 c11be812ecdbf801e8683b8bcb0814a4 306 PANTHER PTHR22911 1 300 6.6E-52 T 22-04-2016 LK04_RS16800 c11be812ecdbf801e8683b8bcb0814a4 306 Gene3D G3DSA:1.20.1050.10 85 128 4.2E-5 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS16800 c11be812ecdbf801e8683b8bcb0814a4 306 SUPERFAMILY SSF103481 39 141 1.96E-14 T 22-04-2016 LK04_RS16800 c11be812ecdbf801e8683b8bcb0814a4 306 Pfam PF00892 EamA-like transporter family 160 288 2.1E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS16800 c11be812ecdbf801e8683b8bcb0814a4 306 Pfam PF00892 EamA-like transporter family 5 138 1.8E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS16800 c11be812ecdbf801e8683b8bcb0814a4 306 SUPERFAMILY SSF103481 194 296 1.31E-12 T 22-04-2016 LK04_RS10355 3cbd802424e4268ea9cbd2a184ca52a7 425 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 135 410 2.6E-85 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 LK04_RS10355 3cbd802424e4268ea9cbd2a184ca52a7 425 PANTHER PTHR30508:SF0 31 420 3.8E-123 T 22-04-2016 LK04_RS10355 3cbd802424e4268ea9cbd2a184ca52a7 425 PANTHER PTHR30508 31 420 3.8E-123 T 22-04-2016 LK04_RS10355 3cbd802424e4268ea9cbd2a184ca52a7 425 SUPERFAMILY SSF101960 13 421 1.7E-107 T 22-04-2016 LK04_RS10355 3cbd802424e4268ea9cbd2a184ca52a7 425 Pfam PF01458 Uncharacterized protein family (UPF0051) 172 395 3.9E-72 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 LK04_RS08880 d944aacd961186382a2f2cb0e9554d74 420 Pfam PF07350 Protein of unknown function (DUF1479) 14 419 1.3E-130 T 22-04-2016 IPR010856 Protein of unknown function DUF1479 LK04_RS08880 d944aacd961186382a2f2cb0e9554d74 420 PANTHER PTHR30613 1 419 4.8E-225 T 22-04-2016 LK04_RS08880 d944aacd961186382a2f2cb0e9554d74 420 PANTHER PTHR30613:SF4 1 419 4.8E-225 T 22-04-2016 LK04_RS08880 d944aacd961186382a2f2cb0e9554d74 420 Gene3D G3DSA:2.60.120.330 4 419 1.2E-146 T 22-04-2016 IPR027443 Isopenicillin N synthase-like LK04_RS08880 d944aacd961186382a2f2cb0e9554d74 420 SUPERFAMILY SSF51197 5 419 3.75E-136 T 22-04-2016 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 Gene3D G3DSA:2.30.130.10 273 365 1.7E-25 T 22-04-2016 IPR015947 PUA-like domain LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 SMART SM00359 276 359 1.6E-22 T 22-04-2016 IPR002478 PUA domain GO:0003723 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 SUPERFAMILY SSF53633 6 256 3.14E-66 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 PIRSF PIRSF000729 1 367 5.3E-140 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 SUPERFAMILY SSF88697 276 366 6.08E-24 T 22-04-2016 IPR015947 PUA-like domain LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 PANTHER PTHR11063 5 367 2.3E-142 T 22-04-2016 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 258 35.709 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 6.5E-153 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 Pfam PF00696 Amino acid kinase family 6 234 5.2E-42 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 Pfam PF01472 PUA domain 276 350 9.7E-22 T 22-04-2016 IPR002478 PUA domain GO:0003723 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 Gene3D G3DSA:3.40.1160.10 4 261 2.8E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 1.2E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 1.2E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 1.2E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 1.2E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LK04_RS14565 1d8b0468abbf6bc4205844988540bcc5 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 1.2E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 PANTHER PTHR10799 295 532 1.3E-79 T 22-04-2016 LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 PANTHER PTHR10799 51 191 1.3E-79 T 22-04-2016 LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 SMART SM00052 432 678 3.9E-117 T 22-04-2016 IPR001633 EAL domain LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 420 5.5E-40 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 PANTHER PTHR10799:SF710 295 532 1.3E-79 T 22-04-2016 LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 PANTHER PTHR10799:SF710 51 191 1.3E-79 T 22-04-2016 LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 Pfam PF03707 Bacterial signalling protein N terminal repeat 116 170 1.4E-15 T 22-04-2016 IPR005330 MHYT domain LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 Pfam PF03707 Bacterial signalling protein N terminal repeat 183 244 5.1E-11 T 22-04-2016 IPR005330 MHYT domain LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 110 4.3E-18 T 22-04-2016 IPR005330 MHYT domain LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 SUPERFAMILY SSF141868 438 682 1.27E-89 T 22-04-2016 IPR001633 EAL domain LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 SUPERFAMILY SSF55073 267 424 5.73E-48 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 Pfam PF00990 Diguanylate cyclase, GGDEF domain 262 417 6.5E-45 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 Pfam PF00563 EAL domain 438 673 6.9E-73 T 22-04-2016 IPR001633 EAL domain LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 Gene3D G3DSA:3.20.20.450 435 683 2.5E-99 T 22-04-2016 IPR001633 EAL domain LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 Gene3D G3DSA:3.30.70.270 264 428 1.8E-55 T 22-04-2016 LK04_RS02155 2a84f1b25d1c89c55b7cc4bac76831fc 696 SMART SM00267 251 422 2.9E-56 T 22-04-2016 IPR000160 GGDEF domain LK04_RS06290 bad4e869cd22cd92767858f191d5f380 287 Gene3D G3DSA:3.40.50.720 1 153 2.4E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06290 bad4e869cd22cd92767858f191d5f380 287 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 1 151 1.3E-33 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LK04_RS06290 bad4e869cd22cd92767858f191d5f380 287 PIRSF PIRSF000103 1 281 2.1E-53 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 LK04_RS06290 bad4e869cd22cd92767858f191d5f380 287 SUPERFAMILY SSF51735 1 152 8.4E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06290 bad4e869cd22cd92767858f191d5f380 287 SUPERFAMILY SSF48179 154 278 3.17E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS06290 bad4e869cd22cd92767858f191d5f380 287 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 156 275 3.0E-34 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 LK04_RS06290 bad4e869cd22cd92767858f191d5f380 287 PANTHER PTHR22981:SF27 2 280 5.2E-125 T 22-04-2016 LK04_RS06290 bad4e869cd22cd92767858f191d5f380 287 PANTHER PTHR22981 2 280 5.2E-125 T 22-04-2016 LK04_RS06290 bad4e869cd22cd92767858f191d5f380 287 Gene3D G3DSA:1.10.1040.10 156 277 2.3E-44 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 Pfam PF03454 MoeA C-terminal region (domain IV) 335 406 2.0E-20 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 PANTHER PTHR10192:SF11 1 413 3.1E-232 T 22-04-2016 LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 SUPERFAMILY SSF63882 8 180 4.06E-57 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 7.9E-39 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 SUPERFAMILY SSF63867 331 411 4.71E-26 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 Gene3D G3DSA:2.170.190.11 54 134 1.0E-33 T 22-04-2016 LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 SMART SM00852 184 321 6.8E-44 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 Gene3D G3DSA:3.40.980.10 167 328 4.0E-65 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 SUPERFAMILY SSF53218 181 326 6.94E-44 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 2.7E-34 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 Gene3D G3DSA:3.90.105.10 135 166 2.1E-20 T 22-04-2016 LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 PANTHER PTHR10192 1 413 3.1E-232 T 22-04-2016 LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 Pfam PF00994 Probable molybdopterin binding domain 184 320 1.5E-28 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 LK04_RS12385 e3b1698ee9a69ccf58fe504e65361c6b 413 Gene3D G3DSA:2.40.340.10 333 405 5.4E-34 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 1.4E-147 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 SUPERFAMILY SSF56276 112 174 5.89E-23 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 SUPERFAMILY SSF56276 43 84 5.89E-23 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 PANTHER PTHR33866 112 263 3.9E-165 T 22-04-2016 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 PANTHER PTHR33866 15 84 3.9E-165 T 22-04-2016 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 PIRSF PIRSF001356 1 263 7.0E-155 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 PANTHER PTHR33866:SF1 112 263 3.9E-165 T 22-04-2016 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 PANTHER PTHR33866:SF1 15 84 3.9E-165 T 22-04-2016 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 Gene3D G3DSA:3.60.90.10 33 186 2.1E-46 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 1.2E-29 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 LK04_RS15175 b2620acd50d132ac8f7c1b129c4a590c 269 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 269 173.654 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 LK04_RS12640 0f1b67f560b4183b866987b5f8365cd0 187 PANTHER PTHR10245:SF21 7 187 1.2E-53 T 22-04-2016 LK04_RS12640 0f1b67f560b4183b866987b5f8365cd0 187 SUPERFAMILY SSF51182 62 187 7.69E-19 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS12640 0f1b67f560b4183b866987b5f8365cd0 187 SUPERFAMILY SSF47413 8 75 1.04E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS12640 0f1b67f560b4183b866987b5f8365cd0 187 Pfam PF13560 Helix-turn-helix domain 9 65 6.6E-14 T 22-04-2016 LK04_RS12640 0f1b67f560b4183b866987b5f8365cd0 187 Gene3D G3DSA:2.60.120.10 85 187 2.8E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS12640 0f1b67f560b4183b866987b5f8365cd0 187 PANTHER PTHR10245 7 187 1.2E-53 T 22-04-2016 LK04_RS12640 0f1b67f560b4183b866987b5f8365cd0 187 Gene3D G3DSA:1.10.260.40 8 76 5.4E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS12640 0f1b67f560b4183b866987b5f8365cd0 187 SMART SM00530 13 68 8.0E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS08655 477d36de2ec76963e494dca736e5dd6c 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 8 342 4.2E-97 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 LK04_RS08655 477d36de2ec76963e494dca736e5dd6c 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 343 4.7E-199 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 LK04_RS08655 477d36de2ec76963e494dca736e5dd6c 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 41.739 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 SUPERFAMILY SSF53633 14 299 5.5E-56 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 Pfam PF00696 Amino acid kinase family 13 284 1.7E-41 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 SUPERFAMILY SSF51735 457 630 6.4E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 Pfam PF00742 Homoserine dehydrogenase 608 803 5.4E-44 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 Gene3D G3DSA:3.40.50.720 457 628 9.5E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 453 2.4E-64 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 PANTHER PTHR21499:SF29 386 810 5.1E-242 T 22-04-2016 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 2.6E-22 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 Gene3D G3DSA:3.30.360.10 629 786 5.5E-53 T 22-04-2016 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 Gene3D G3DSA:3.40.1160.10 94 299 3.0E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 Gene3D G3DSA:3.40.1160.10 13 59 3.0E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 SUPERFAMILY SSF55347 608 791 7.19E-48 T 22-04-2016 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 PIRSF PIRSF000727 12 810 1.6E-289 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS19640 4e65a4f649a7b41ab90a2e8286166bdf 810 PANTHER PTHR21499 386 810 5.1E-242 T 22-04-2016 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 PIRSF PIRSF001174 1 775 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 2.4E-42 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 PANTHER PTHR10046:SF43 8 776 0.0 T 22-04-2016 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 Gene3D G3DSA:1.10.8.60 500 584 2.7E-33 T 22-04-2016 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 PANTHER PTHR10046 8 776 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 SMART SM00382 348 492 5.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 SUPERFAMILY SSF52540 313 587 1.32E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 SUPERFAMILY SSF54211 595 770 8.34E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 SUPERFAMILY SSF88697 10 201 5.96E-51 T 22-04-2016 IPR015947 PUA-like domain LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 Gene3D G3DSA:3.30.230.10 590 771 1.2E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 SMART SM00464 10 202 2.6E-84 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 3.2E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.111 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 2.6E-97 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 2.5E-57 T 22-04-2016 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 2.5E-57 T 22-04-2016 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 2.5E-57 T 22-04-2016 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 2.5E-57 T 22-04-2016 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 2.5E-57 T 22-04-2016 LK04_RS13970 90a7b7aa12d9c79839433b6c3c83801e 784 Gene3D G3DSA:3.40.50.300 311 499 1.1E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07435 3594627b25637127dbe6507107541ab0 323 Pfam PF01297 Zinc-uptake complex component A periplasmic 29 314 1.4E-53 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LK04_RS07435 3594627b25637127dbe6507107541ab0 323 PANTHER PTHR30477 28 116 4.6E-84 T 22-04-2016 LK04_RS07435 3594627b25637127dbe6507107541ab0 323 PANTHER PTHR30477 141 307 4.6E-84 T 22-04-2016 LK04_RS07435 3594627b25637127dbe6507107541ab0 323 Gene3D G3DSA:3.40.50.1980 211 321 4.1E-30 T 22-04-2016 LK04_RS07435 3594627b25637127dbe6507107541ab0 323 PANTHER PTHR30477:SF1 28 116 4.6E-84 T 22-04-2016 LK04_RS07435 3594627b25637127dbe6507107541ab0 323 PANTHER PTHR30477:SF1 141 307 4.6E-84 T 22-04-2016 LK04_RS07435 3594627b25637127dbe6507107541ab0 323 SUPERFAMILY SSF53807 29 320 1.91E-73 T 22-04-2016 LK04_RS07435 3594627b25637127dbe6507107541ab0 323 Gene3D G3DSA:3.40.50.1980 28 210 8.1E-41 T 22-04-2016 LK04_RS17185 d3195e7f1c8d778aa16ab68164b5ccc0 181 Gene3D G3DSA:2.40.160.10 56 168 1.2E-4 T 22-04-2016 IPR023614 Porin domain LK04_RS17185 d3195e7f1c8d778aa16ab68164b5ccc0 181 SUPERFAMILY SSF56925 57 181 3.22E-9 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS17185 d3195e7f1c8d778aa16ab68164b5ccc0 181 Pfam PF07437 YfaZ precursor 5 181 1.4E-45 T 22-04-2016 IPR009998 YfaZ LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.9E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 Gene3D G3DSA:3.40.50.300 3 209 2.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 5.5E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 PANTHER PTHR23115 1 393 8.4E-286 T 22-04-2016 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 SUPERFAMILY SSF50465 298 393 2.71E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 Gene3D G3DSA:2.40.30.10 300 393 5.6E-47 T 22-04-2016 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.695 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 SUPERFAMILY SSF52540 7 219 5.77E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 SUPERFAMILY SSF50447 205 301 1.43E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 7.0E-34 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 PANTHER PTHR23115:SF151 1 393 8.4E-286 T 22-04-2016 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 1.2E-234 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 Pfam PF00009 Elongation factor Tu GTP binding domain 11 201 1.8E-57 T 22-04-2016 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 Gene3D G3DSA:2.40.30.10 210 298 2.3E-35 T 22-04-2016 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.48E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.48E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.48E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.48E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS17810 69be15d1f82cfaee082929d1058401c6 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.48E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.9E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 Gene3D G3DSA:3.40.50.300 3 209 2.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 5.5E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 PANTHER PTHR23115 1 393 8.4E-286 T 22-04-2016 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 SUPERFAMILY SSF50465 298 393 2.71E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 Gene3D G3DSA:2.40.30.10 300 393 5.6E-47 T 22-04-2016 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.695 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 SUPERFAMILY SSF52540 7 219 5.77E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 SUPERFAMILY SSF50447 205 301 1.43E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 7.0E-34 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 PANTHER PTHR23115:SF151 1 393 8.4E-286 T 22-04-2016 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 1.2E-234 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 Pfam PF00009 Elongation factor Tu GTP binding domain 11 201 1.8E-57 T 22-04-2016 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 Gene3D G3DSA:2.40.30.10 210 298 2.3E-35 T 22-04-2016 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.48E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.48E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.48E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.48E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS00850 69be15d1f82cfaee082929d1058401c6 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.48E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS15700 d5f14b84006b4f3b60224c9c37e1225c 287 Gene3D G3DSA:3.90.1580.10 27 268 1.7E-50 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme LK04_RS15700 d5f14b84006b4f3b60224c9c37e1225c 287 Pfam PF03781 Sulfatase-modifying factor enzyme 1 35 263 2.2E-41 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme LK04_RS15700 d5f14b84006b4f3b60224c9c37e1225c 287 SUPERFAMILY SSF56436 36 267 5.84E-50 T 22-04-2016 IPR016187 C-type lectin fold LK04_RS15700 d5f14b84006b4f3b60224c9c37e1225c 287 PANTHER PTHR23150 37 247 2.6E-30 T 22-04-2016 LK04_RS16965 099b6489ed7d7a7f352480fa5a040156 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 259 1.7E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16965 099b6489ed7d7a7f352480fa5a040156 271 Gene3D G3DSA:1.10.3720.10 10 259 1.3E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16965 099b6489ed7d7a7f352480fa5a040156 271 SUPERFAMILY SSF161098 7 271 5.42E-66 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16965 099b6489ed7d7a7f352480fa5a040156 271 PANTHER PTHR32243 11 271 5.8E-74 T 22-04-2016 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 PIRSF PIRSF000727 1 818 0.0 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 Gene3D G3DSA:3.40.1160.10 111 298 2.2E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 Gene3D G3DSA:3.40.1160.10 1 49 2.2E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 Gene3D G3DSA:3.30.360.10 636 792 5.3E-57 T 22-04-2016 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.2E-146 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 Pfam PF13840 ACT domain 395 456 5.8E-9 T 22-04-2016 IPR027795 GATS-like ACT domain LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 SUPERFAMILY SSF55021 383 475 1.53E-21 T 22-04-2016 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 SUPERFAMILY SSF53633 1 297 8.01E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 Pfam PF00696 Amino acid kinase family 2 284 1.9E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 SUPERFAMILY SSF51735 464 636 4.23E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 Pfam PF00742 Homoserine dehydrogenase 614 811 2.9E-47 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 8.1E-30 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 PANTHER PTHR21499:SF1 1 471 1.5E-185 T 22-04-2016 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 SUPERFAMILY SSF55021 301 381 5.8E-23 T 22-04-2016 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 Gene3D G3DSA:3.40.50.720 464 635 1.4E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 SUPERFAMILY SSF55347 614 798 2.42E-52 T 22-04-2016 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 PANTHER PTHR21499 1 471 1.5E-185 T 22-04-2016 LK04_RS15815 d0a6eac0e6c008a9a07b87f60e0ef37d 820 Pfam PF01842 ACT domain 324 377 1.6E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 SMART SM00482 686 893 5.5E-112 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Pfam PF01612 3'-5' exonuclease 330 517 4.9E-40 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Gene3D G3DSA:1.10.150.20 712 817 6.6E-36 T 22-04-2016 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 SUPERFAMILY SSF56672 524 929 1.22E-154 T 22-04-2016 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 SMART SM00279 173 208 3.1E-12 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 8.6E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PANTHER PTHR10133:SF27 1 288 0.0 T 22-04-2016 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PANTHER PTHR10133:SF27 316 928 0.0 T 22-04-2016 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Gene3D G3DSA:3.40.50.1010 8 186 3.4E-73 T 22-04-2016 IPR029060 PIN domain-like LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 677 1.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 876 889 1.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 1.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 779 1.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 693 1.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 723 1.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 743 1.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 861 1.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 1.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Gene3D G3DSA:3.30.70.370 664 711 7.4E-67 T 22-04-2016 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Gene3D G3DSA:3.30.70.370 818 929 7.4E-67 T 22-04-2016 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 SMART SM00474 330 517 4.2E-37 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 SUPERFAMILY SSF88723 7 170 7.61E-57 T 22-04-2016 IPR029060 PIN domain-like LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Gene3D G3DSA:3.30.420.10 330 542 1.0E-83 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 ProSitePatterns PS00447 DNA polymerase family A signature. 754 773 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 TIGRFAM TIGR00593 pola: DNA polymerase I 9 929 1.6E-285 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 SUPERFAMILY SSF47807 171 291 1.21E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 SUPERFAMILY SSF53098 327 518 2.32E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Pfam PF00476 DNA polymerase family A 551 926 3.9E-155 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Gene3D G3DSA:1.10.150.20 187 253 2.3E-25 T 22-04-2016 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.3E-55 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 SMART SM00475 7 268 1.1E-138 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PANTHER PTHR10133 1 288 0.0 T 22-04-2016 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 PANTHER PTHR10133 316 928 0.0 T 22-04-2016 LK04_RS19180 ac1197977d8c425e3ff86ec12f212238 929 Gene3D G3DSA:1.20.1060.10 543 663 3.3E-36 T 22-04-2016 LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 SUPERFAMILY SSF81301 2 119 3.92E-30 T 22-04-2016 LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 51.163 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 2.4E-16 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 PANTHER PTHR13734 5 301 1.7E-67 T 22-04-2016 LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 Gene3D G3DSA:3.30.460.10 2 121 4.7E-31 T 22-04-2016 LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 Pfam PF01966 HD domain 231 328 2.0E-7 T 22-04-2016 IPR006674 HD domain LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 SUPERFAMILY SSF81891 120 410 4.71E-56 T 22-04-2016 LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 Pfam PF01743 Poly A polymerase head domain 4 122 2.8E-18 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 Gene3D G3DSA:1.10.3090.10 122 359 6.4E-51 T 22-04-2016 LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 PIRSF PIRSF000813 1 407 8.8E-190 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 LK04_RS01930 f64b97a0146c62e272eb484453957b3e 410 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 45.958 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 LK04_RS01135 af99360c4b1702aa54fd686427f90f9a 321 SUPERFAMILY SSF51395 10 319 1.72E-88 T 22-04-2016 LK04_RS01135 af99360c4b1702aa54fd686427f90f9a 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.217 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 LK04_RS01135 af99360c4b1702aa54fd686427f90f9a 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 2.9E-138 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 LK04_RS01135 af99360c4b1702aa54fd686427f90f9a 321 PIRSF PIRSF006621 1 321 5.0E-103 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS01135 af99360c4b1702aa54fd686427f90f9a 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 3.0E-114 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS01135 af99360c4b1702aa54fd686427f90f9a 321 Gene3D G3DSA:1.10.1200.80 252 320 3.5E-18 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 LK04_RS01135 af99360c4b1702aa54fd686427f90f9a 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS01135 af99360c4b1702aa54fd686427f90f9a 321 PANTHER PTHR11082 1 318 1.4E-148 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS01135 af99360c4b1702aa54fd686427f90f9a 321 PANTHER PTHR11082:SF25 1 318 1.4E-148 T 22-04-2016 LK04_RS01135 af99360c4b1702aa54fd686427f90f9a 321 Gene3D G3DSA:3.20.20.70 7 244 6.4E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 SUPERFAMILY SSF54909 69 154 1.13E-17 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 PANTHER PTHR30154 1 156 2.9E-48 T 22-04-2016 LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 1.6E-18 T 22-04-2016 LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 Gene3D G3DSA:3.30.70.920 60 156 2.7E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 Pfam PF01037 Lrp/AsnC ligand binding domain 74 146 1.8E-18 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 Gene3D G3DSA:1.10.10.10 8 58 1.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 SUPERFAMILY SSF46785 6 64 1.63E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 PANTHER PTHR30154:SF28 1 156 2.9E-48 T 22-04-2016 LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.7E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.7E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.7E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS06605 8ec8048517e7e13f553794ecafadb941 170 SMART SM00344 7 116 2.8E-42 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LK04_RS16245 50aa138827d347cdce5b6cea76241967 358 PANTHER PTHR33529 1 358 2.1E-162 T 22-04-2016 LK04_RS16245 50aa138827d347cdce5b6cea76241967 358 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 356 3.4E-135 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 LK04_RS16245 50aa138827d347cdce5b6cea76241967 358 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 356 1.2E-72 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 LK04_RS16245 50aa138827d347cdce5b6cea76241967 358 PANTHER PTHR33529:SF1 1 358 2.1E-162 T 22-04-2016 LK04_RS09050 f0a5971f9a6dde6ca38368a19ea2a734 343 Pfam PF16884 N-terminal domain of oxidoreductase 10 116 4.5E-43 T 22-04-2016 LK04_RS09050 f0a5971f9a6dde6ca38368a19ea2a734 343 Gene3D G3DSA:3.40.50.720 142 309 6.2E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09050 f0a5971f9a6dde6ca38368a19ea2a734 343 Pfam PF00107 Zinc-binding dehydrogenase 160 299 1.2E-19 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS09050 f0a5971f9a6dde6ca38368a19ea2a734 343 SUPERFAMILY SSF50129 7 145 1.18E-41 T 22-04-2016 IPR011032 GroES-like LK04_RS09050 f0a5971f9a6dde6ca38368a19ea2a734 343 SMART SM00829 21 339 1.0E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS09050 f0a5971f9a6dde6ca38368a19ea2a734 343 PANTHER PTHR11695 26 343 7.2E-171 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS09050 f0a5971f9a6dde6ca38368a19ea2a734 343 SUPERFAMILY SSF51735 126 303 5.63E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09050 f0a5971f9a6dde6ca38368a19ea2a734 343 PANTHER PTHR11695:SF557 26 343 7.2E-171 T 22-04-2016 LK04_RS09050 f0a5971f9a6dde6ca38368a19ea2a734 343 Gene3D G3DSA:3.90.180.10 6 141 6.7E-53 T 22-04-2016 IPR011032 GroES-like LK04_RS08270 67cdd94c8b20e86fe2f0fff50b1f145d 254 PANTHER PTHR14969 157 254 7.7E-84 T 22-04-2016 LK04_RS08270 67cdd94c8b20e86fe2f0fff50b1f145d 254 PANTHER PTHR14969 1 120 7.7E-84 T 22-04-2016 LK04_RS08270 67cdd94c8b20e86fe2f0fff50b1f145d 254 Gene3D G3DSA:1.20.144.10 142 232 3.3E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS08270 67cdd94c8b20e86fe2f0fff50b1f145d 254 Gene3D G3DSA:1.20.144.10 37 106 3.3E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS08270 67cdd94c8b20e86fe2f0fff50b1f145d 254 SUPERFAMILY SSF48317 16 113 6.67E-29 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS08270 67cdd94c8b20e86fe2f0fff50b1f145d 254 SUPERFAMILY SSF48317 145 233 6.67E-29 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS08270 67cdd94c8b20e86fe2f0fff50b1f145d 254 PANTHER PTHR14969:SF22 157 254 7.7E-84 T 22-04-2016 LK04_RS08270 67cdd94c8b20e86fe2f0fff50b1f145d 254 PANTHER PTHR14969:SF22 1 120 7.7E-84 T 22-04-2016 LK04_RS08270 67cdd94c8b20e86fe2f0fff50b1f145d 254 SMART SM00014 77 227 3.2E-30 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS08270 67cdd94c8b20e86fe2f0fff50b1f145d 254 Pfam PF01569 PAP2 superfamily 80 232 1.2E-29 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS10985 125c11456d2a9d1e75ccdaa6639b226e 177 PANTHER PTHR33795:SF1 3 176 5.7E-34 T 22-04-2016 LK04_RS10985 125c11456d2a9d1e75ccdaa6639b226e 177 SUPERFAMILY SSF48295 4 61 1.46E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 LK04_RS10985 125c11456d2a9d1e75ccdaa6639b226e 177 SUPERFAMILY SSF46689 63 164 4.48E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10985 125c11456d2a9d1e75ccdaa6639b226e 177 Gene3D G3DSA:1.10.10.10 4 57 3.1E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10985 125c11456d2a9d1e75ccdaa6639b226e 177 PANTHER PTHR33795 3 176 5.7E-34 T 22-04-2016 LK04_RS10985 125c11456d2a9d1e75ccdaa6639b226e 177 Gene3D G3DSA:1.10.10.60 65 159 7.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10985 125c11456d2a9d1e75ccdaa6639b226e 177 Pfam PF13518 Helix-turn-helix domain 9 59 1.7E-12 T 22-04-2016 LK04_RS10985 125c11456d2a9d1e75ccdaa6639b226e 177 Pfam PF13518 Helix-turn-helix domain 68 110 2.8E-6 T 22-04-2016 LK04_RS07820 048a90e5d1cb40ae244252d8c4f46aba 522 SUPERFAMILY SSF56176 434 520 4.91E-17 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS07820 048a90e5d1cb40ae244252d8c4f46aba 522 Pfam PF03741 Integral membrane protein TerC family 14 203 1.8E-50 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 LK04_RS07820 048a90e5d1cb40ae244252d8c4f46aba 522 PANTHER PTHR22777 1 519 0.0 T 22-04-2016 LK04_RS07820 048a90e5d1cb40ae244252d8c4f46aba 522 SUPERFAMILY SSF54631 290 428 1.26E-22 T 22-04-2016 LK04_RS07820 048a90e5d1cb40ae244252d8c4f46aba 522 SMART SM01091 432 513 1.8E-18 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS07820 048a90e5d1cb40ae244252d8c4f46aba 522 Gene3D G3DSA:3.30.465.10 428 520 1.6E-18 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS07820 048a90e5d1cb40ae244252d8c4f46aba 522 Gene3D G3DSA:3.10.580.10 287 427 5.0E-13 T 22-04-2016 LK04_RS07820 048a90e5d1cb40ae244252d8c4f46aba 522 Pfam PF03471 Transporter associated domain 435 512 5.9E-15 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS07820 048a90e5d1cb40ae244252d8c4f46aba 522 PANTHER PTHR22777:SF15 1 519 0.0 T 22-04-2016 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 Gene3D G3DSA:1.10.10.60 54 77 6.5E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 Pfam PF08362 YcdC-like protein, C-terminal region 69 210 1.3E-57 T 22-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 PANTHER PTHR30055:SF53 5 173 2.1E-57 T 22-04-2016 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 SUPERFAMILY SSF46689 10 90 2.79E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 Gene3D G3DSA:1.10.357.10 78 211 4.8E-59 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 PANTHER PTHR30055 5 173 2.1E-57 T 22-04-2016 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 7.2E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 Gene3D G3DSA:1.10.10.60 9 53 4.0E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.8E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.8E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS11725 babfa8ec561fa602f7445faf64c9b39c 211 SUPERFAMILY SSF48498 86 210 2.15E-42 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LK04_RS15060 17e8a95ea2bfc88240535d1aa02e1a8c 658 SUPERFAMILY SSF81345 8 324 8.76E-59 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS15060 17e8a95ea2bfc88240535d1aa02e1a8c 658 Gene3D G3DSA:1.10.3470.10 343 657 2.5E-79 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS15060 17e8a95ea2bfc88240535d1aa02e1a8c 658 PANTHER PTHR30472:SF16 243 657 1.1E-169 T 22-04-2016 LK04_RS15060 17e8a95ea2bfc88240535d1aa02e1a8c 658 Gene3D G3DSA:1.10.3470.10 3 326 2.4E-73 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS15060 17e8a95ea2bfc88240535d1aa02e1a8c 658 SUPERFAMILY SSF81345 345 657 3.4E-69 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS15060 17e8a95ea2bfc88240535d1aa02e1a8c 658 PANTHER PTHR30472 243 657 1.1E-169 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS15060 17e8a95ea2bfc88240535d1aa02e1a8c 658 Pfam PF01032 FecCD transport family 16 322 7.0E-64 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS15060 17e8a95ea2bfc88240535d1aa02e1a8c 658 Pfam PF01032 FecCD transport family 355 657 7.0E-72 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS18540 175dd5d1564be38d0225d241967c65da 203 PANTHER PTHR11260 1 201 2.0E-73 T 22-04-2016 LK04_RS18540 175dd5d1564be38d0225d241967c65da 203 SUPERFAMILY SSF52833 1 99 3.39E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS18540 175dd5d1564be38d0225d241967c65da 203 SUPERFAMILY SSF47616 77 201 1.63E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS18540 175dd5d1564be38d0225d241967c65da 203 PANTHER PTHR11260:SF256 1 201 2.0E-73 T 22-04-2016 LK04_RS18540 175dd5d1564be38d0225d241967c65da 203 Gene3D G3DSA:3.40.30.10 1 87 4.5E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS18540 175dd5d1564be38d0225d241967c65da 203 Gene3D G3DSA:1.20.1050.10 88 200 1.0E-11 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS18540 175dd5d1564be38d0225d241967c65da 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 5.7E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS03960 03c5f4775bee1e2a23bbc036c93214c9 553 PANTHER PTHR11059 2 553 6.5E-183 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LK04_RS03960 03c5f4775bee1e2a23bbc036c93214c9 553 Gene3D G3DSA:3.40.50.300 366 395 3.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03960 03c5f4775bee1e2a23bbc036c93214c9 553 Gene3D G3DSA:3.40.50.300 431 496 3.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03960 03c5f4775bee1e2a23bbc036c93214c9 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 510 5.7E-20 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal LK04_RS03960 03c5f4775bee1e2a23bbc036c93214c9 553 Gene3D G3DSA:3.40.50.300 1 206 1.4E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03960 03c5f4775bee1e2a23bbc036c93214c9 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.5E-169 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LK04_RS03960 03c5f4775bee1e2a23bbc036c93214c9 553 SUPERFAMILY SSF52540 287 339 5.08E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03960 03c5f4775bee1e2a23bbc036c93214c9 553 SUPERFAMILY SSF52540 1 199 5.08E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03960 03c5f4775bee1e2a23bbc036c93214c9 553 SUPERFAMILY SSF52540 368 516 5.08E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03960 03c5f4775bee1e2a23bbc036c93214c9 553 PIRSF PIRSF003128 1 553 1.0E-156 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LK04_RS00315 acc1b62de2e5c8180429943bd6ff1a46 280 SUPERFAMILY SSF53335 9 278 3.74E-99 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS00315 acc1b62de2e5c8180429943bd6ff1a46 280 PANTHER PTHR37426:SF1 2 280 3.0E-159 T 22-04-2016 LK04_RS00315 acc1b62de2e5c8180429943bd6ff1a46 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS00315 acc1b62de2e5c8180429943bd6ff1a46 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS00315 acc1b62de2e5c8180429943bd6ff1a46 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 276 2.3E-111 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 LK04_RS00315 acc1b62de2e5c8180429943bd6ff1a46 280 Gene3D G3DSA:3.40.50.150 1 279 7.4E-118 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS00315 acc1b62de2e5c8180429943bd6ff1a46 280 PANTHER PTHR37426 2 280 3.0E-159 T 22-04-2016 LK04_RS00315 acc1b62de2e5c8180429943bd6ff1a46 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.864 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 LK04_RS02320 a81c8aebdaf75dbdceeb88baf0ae4d79 126 Gene3D G3DSA:3.30.70.900 1 119 7.1E-22 T 22-04-2016 LK04_RS02320 a81c8aebdaf75dbdceeb88baf0ae4d79 126 Pfam PF07110 EthD domain 12 109 9.8E-20 T 22-04-2016 IPR009799 EthD domain LK04_RS02320 a81c8aebdaf75dbdceeb88baf0ae4d79 126 SUPERFAMILY SSF54909 1 118 1.18E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS02320 a81c8aebdaf75dbdceeb88baf0ae4d79 126 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 110 2.1E-9 T 22-04-2016 IPR009799 EthD domain LK04_RS00515 baf44f5299ece6509164272328bc23fc 801 PIRSF PIRSF000460 1 801 8.1E-203 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LK04_RS00515 baf44f5299ece6509164272328bc23fc 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 9 798 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LK04_RS00515 baf44f5299ece6509164272328bc23fc 801 Pfam PF00343 Carbohydrate phosphorylase 93 798 9.5E-300 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LK04_RS00515 baf44f5299ece6509164272328bc23fc 801 PANTHER PTHR11468:SF10 1 801 0.0 T 22-04-2016 LK04_RS00515 baf44f5299ece6509164272328bc23fc 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 643 655 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LK04_RS00515 baf44f5299ece6509164272328bc23fc 801 Gene3D G3DSA:3.40.50.2000 467 784 2.2E-128 T 22-04-2016 LK04_RS00515 baf44f5299ece6509164272328bc23fc 801 PANTHER PTHR11468 1 801 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LK04_RS00515 baf44f5299ece6509164272328bc23fc 801 Gene3D G3DSA:3.40.50.2000 4 466 3.5E-179 T 22-04-2016 LK04_RS00515 baf44f5299ece6509164272328bc23fc 801 SUPERFAMILY SSF53756 5 799 4.16E-287 T 22-04-2016 LK04_RS10660 ade24955520d11be79560f628af033ae 556 SMART SM00283 269 516 5.0E-100 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 Pfam PF00672 HAMP domain 196 265 8.0E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS10660 ade24955520d11be79560f628af033ae 556 SUPERFAMILY SSF47170 25 177 1.83E-33 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 PANTHER PTHR32089:SF48 1 519 6.1E-203 T 22-04-2016 LK04_RS10660 ade24955520d11be79560f628af033ae 556 Pfam PF02203 Tar ligand binding domain homologue 1 172 2.1E-37 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 Gene3D G3DSA:1.10.287.950 284 488 4.0E-65 T 22-04-2016 LK04_RS10660 ade24955520d11be79560f628af033ae 556 SUPERFAMILY SSF58104 236 517 1.18E-77 T 22-04-2016 LK04_RS10660 ade24955520d11be79560f628af033ae 556 Gene3D G3DSA:1.20.120.30 36 180 5.5E-31 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LK04_RS10660 ade24955520d11be79560f628af033ae 556 PANTHER PTHR32089 1 519 6.1E-203 T 22-04-2016 LK04_RS10660 ade24955520d11be79560f628af033ae 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 3.6E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 3.6E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 3.6E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 3.6E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.6E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 3.6E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 3.6E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10660 ade24955520d11be79560f628af033ae 556 SMART SM00304 216 268 4.3E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS10660 ade24955520d11be79560f628af033ae 556 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 515 6.5E-68 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 PANTHER PTHR26402:SF576 3 229 1.2E-152 T 22-04-2016 LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 SUPERFAMILY SSF46894 129 226 2.13E-31 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 Pfam PF00072 Response regulator receiver domain 5 117 4.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.2E-114 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 SMART SM00448 3 116 6.6E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 PANTHER PTHR26402 3 229 1.2E-152 T 22-04-2016 LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 SMART SM00862 150 225 2.9E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 SUPERFAMILY SSF52172 3 126 1.85E-42 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 Gene3D G3DSA:1.10.10.10 129 227 5.3E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 Gene3D G3DSA:3.40.50.2300 3 123 6.1E-40 T 22-04-2016 LK04_RS14200 0d317bbdb0976ffff8f385c40629e11e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 8.9E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS12735 74411e95fbbfef839bddaacd50efe95b 312 Gene3D G3DSA:3.40.710.10 40 282 3.4E-66 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS12735 74411e95fbbfef839bddaacd50efe95b 312 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 40 266 1.7E-78 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LK04_RS12735 74411e95fbbfef839bddaacd50efe95b 312 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 71 82 1.2E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS12735 74411e95fbbfef839bddaacd50efe95b 312 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.2E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS12735 74411e95fbbfef839bddaacd50efe95b 312 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.2E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS12735 74411e95fbbfef839bddaacd50efe95b 312 SUPERFAMILY SSF56601 5 282 6.01E-63 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS12735 74411e95fbbfef839bddaacd50efe95b 312 PANTHER PTHR21581 1 306 7.8E-167 T 22-04-2016 LK04_RS12735 74411e95fbbfef839bddaacd50efe95b 312 PANTHER PTHR21581:SF8 1 306 7.8E-167 T 22-04-2016 LK04_RS17400 09b73466f56346e1d96ad7a93b39bd33 541 SUPERFAMILY SSF109755 320 531 1.88E-27 T 22-04-2016 LK04_RS17400 09b73466f56346e1d96ad7a93b39bd33 541 Pfam PF01895 PhoU domain 341 423 1.2E-5 T 22-04-2016 IPR026022 PhoU domain LK04_RS17400 09b73466f56346e1d96ad7a93b39bd33 541 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 3.1E-133 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 LK04_RS17400 09b73466f56346e1d96ad7a93b39bd33 541 PANTHER PTHR10010 1 443 2.9E-45 T 22-04-2016 LK04_RS17400 09b73466f56346e1d96ad7a93b39bd33 541 Gene3D G3DSA:1.20.58.220 327 425 1.5E-7 T 22-04-2016 LK04_RS17400 09b73466f56346e1d96ad7a93b39bd33 541 PANTHER PTHR10010:SF26 1 443 2.9E-45 T 22-04-2016 LK04_RS17400 09b73466f56346e1d96ad7a93b39bd33 541 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 307 1.8E-116 T 22-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 LK04_RS17400 09b73466f56346e1d96ad7a93b39bd33 541 Pfam PF02690 Na+/Pi-cotransporter 13 147 2.5E-36 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 LK04_RS17400 09b73466f56346e1d96ad7a93b39bd33 541 Pfam PF02690 Na+/Pi-cotransporter 159 242 1.5E-9 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 LK04_RS11260 5221369d923b9cf90e741093d212c37f 379 SUPERFAMILY SSF48208 32 377 1.7E-87 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LK04_RS11260 5221369d923b9cf90e741093d212c37f 379 Pfam PF07470 Glycosyl Hydrolase Family 88 38 377 2.7E-104 T 22-04-2016 IPR010905 Glycosyl hydrolase, family 88 LK04_RS11260 5221369d923b9cf90e741093d212c37f 379 Gene3D G3DSA:1.50.10.10 24 376 1.2E-104 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 LK04_RS11260 5221369d923b9cf90e741093d212c37f 379 PANTHER PTHR33886 8 378 6.1E-158 T 22-04-2016 LK04_RS11260 5221369d923b9cf90e741093d212c37f 379 PANTHER PTHR33886:SF2 8 378 6.1E-158 T 22-04-2016 LK04_RS10310 25709476962b3da2ccaff157c26023ab 457 PANTHER PTHR11206 2 457 5.7E-220 T 22-04-2016 LK04_RS10310 25709476962b3da2ccaff157c26023ab 457 Pfam PF01554 MatE 17 177 1.7E-38 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS10310 25709476962b3da2ccaff157c26023ab 457 Pfam PF01554 MatE 244 405 2.1E-36 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS10310 25709476962b3da2ccaff157c26023ab 457 PIRSF PIRSF006603 2 453 7.4E-59 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS10310 25709476962b3da2ccaff157c26023ab 457 PANTHER PTHR11206:SF153 2 457 5.7E-220 T 22-04-2016 LK04_RS10310 25709476962b3da2ccaff157c26023ab 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 48.629 T 22-04-2016 IPR022913 Multidrug resistance protein MdtK LK04_RS10310 25709476962b3da2ccaff157c26023ab 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 4.2E-117 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS01745 e9def89238e6aa60bf82c7e3c0bc62a3 236 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 31 219 7.2E-40 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LK04_RS01745 e9def89238e6aa60bf82c7e3c0bc62a3 236 SUPERFAMILY SSF64438 29 229 1.25E-41 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic LK04_RS01745 e9def89238e6aa60bf82c7e3c0bc62a3 236 Gene3D G3DSA:3.60.140.10 29 228 2.2E-47 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LK04_RS01745 e9def89238e6aa60bf82c7e3c0bc62a3 236 PANTHER PTHR30616 177 234 4.9E-45 T 22-04-2016 LK04_RS01745 e9def89238e6aa60bf82c7e3c0bc62a3 236 PANTHER PTHR30616 37 161 4.9E-45 T 22-04-2016 LK04_RS15845 7c6d2b6ac42e193b15b4441d1ac3bf94 172 SUPERFAMILY SSF52972 1 168 3.53E-55 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LK04_RS15845 7c6d2b6ac42e193b15b4441d1ac3bf94 172 PANTHER PTHR34699 1 170 3.1E-90 T 22-04-2016 LK04_RS15845 7c6d2b6ac42e193b15b4441d1ac3bf94 172 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 167 1.6E-50 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase LK04_RS15845 7c6d2b6ac42e193b15b4441d1ac3bf94 172 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 28.213 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase LK04_RS15845 7c6d2b6ac42e193b15b4441d1ac3bf94 172 Gene3D G3DSA:3.90.950.10 2 168 6.0E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LK04_RS15845 7c6d2b6ac42e193b15b4441d1ac3bf94 172 Pfam PF01931 Protein of unknown function DUF84 7 165 1.1E-50 T 22-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 LK04_RS15845 7c6d2b6ac42e193b15b4441d1ac3bf94 172 PANTHER PTHR34699:SF3 1 170 3.1E-90 T 22-04-2016 LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 PANTHER PTHR10937:SF0 1 609 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.809 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 SUPERFAMILY SSF53697 245 609 9.28E-113 T 22-04-2016 LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 Pfam PF01380 SIS domain 462 591 1.7E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 Pfam PF01380 SIS domain 289 418 7.5E-34 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 SUPERFAMILY SSF56235 2 232 1.72E-74 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 Gene3D G3DSA:3.40.50.10490 445 609 7.2E-68 T 22-04-2016 LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 PANTHER PTHR10937 1 609 0.0 T 22-04-2016 LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 Gene3D G3DSA:3.40.50.10490 245 444 1.4E-65 T 22-04-2016 LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 3.8E-264 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 Gene3D G3DSA:3.60.20.10 2 236 7.7E-80 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS18990 0f050ffcf6ac40bf9cee8214196e34ae 609 Pfam PF13522 Glutamine amidotransferase domain 67 184 2.9E-20 T 22-04-2016 LK04_RS07020 09505f406c2a7d69efebced9caa505ec 155 Pfam PF13987 YedD-like protein 24 128 5.7E-53 T 22-04-2016 IPR025596 YedD-like protein LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 Pfam PF03466 LysR substrate binding domain 87 293 3.1E-37 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 PANTHER PTHR30346 1 292 3.4E-89 T 22-04-2016 LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 PANTHER PTHR30346:SF6 1 292 3.4E-89 T 22-04-2016 LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 Gene3D G3DSA:3.40.190.10 88 172 2.9E-22 T 22-04-2016 LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.7E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 Gene3D G3DSA:3.40.190.10 173 268 2.1E-27 T 22-04-2016 LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 SUPERFAMILY SSF53850 87 293 3.5E-33 T 22-04-2016 LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 Gene3D G3DSA:1.10.10.10 1 84 3.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS09340 7c96b71d82b8f99cd1b3b5d1f9f58353 298 SUPERFAMILY SSF46785 1 85 5.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00670 198489668446f955b9f85ab16a884e93 454 PIRSF PIRSF036426 1 454 2.2E-202 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 Pfam PF14824 Sirohaem biosynthesis protein central 119 146 8.3E-9 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 Hamap MF_01646 Siroheme synthase [cysG]. 1 454 50.141 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 SUPERFAMILY SSF53790 214 454 1.23E-80 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 Gene3D G3DSA:3.30.950.10 332 454 1.6E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 Gene3D G3DSA:3.40.1010.10 215 331 2.6E-46 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 Gene3D G3DSA:1.10.8.210 149 211 2.0E-21 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.3E-18 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 Gene3D G3DSA:3.40.50.720 1 110 2.5E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00670 198489668446f955b9f85ab16a884e93 454 SUPERFAMILY SSF75615 114 206 1.44E-26 T 22-04-2016 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 SUPERFAMILY SSF51735 1 110 1.27E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00670 198489668446f955b9f85ab16a884e93 454 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 1.9E-93 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 Gene3D G3DSA:3.30.160.110 113 148 1.3E-19 T 22-04-2016 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 PANTHER PTHR21091 165 445 2.2E-87 T 22-04-2016 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 205 1.6E-69 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 5.1E-52 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 PANTHER PTHR21091:SF16 165 445 2.2E-87 T 22-04-2016 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 Pfam PF13241 Putative NAD(P)-binding 6 115 5.1E-24 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS00670 198489668446f955b9f85ab16a884e93 454 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS12220 b1d4f6e92f9748b346321330f955505b 242 SUPERFAMILY SSF52540 3 233 6.46E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12220 b1d4f6e92f9748b346321330f955505b 242 PANTHER PTHR24220:SF495 4 241 1.7E-169 T 22-04-2016 LK04_RS12220 b1d4f6e92f9748b346321330f955505b 242 SMART SM00382 27 218 6.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12220 b1d4f6e92f9748b346321330f955505b 242 Gene3D G3DSA:3.40.50.300 3 235 4.4E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12220 b1d4f6e92f9748b346321330f955505b 242 PIRSF PIRSF039085 1 242 2.7E-84 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS12220 b1d4f6e92f9748b346321330f955505b 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS12220 b1d4f6e92f9748b346321330f955505b 242 PANTHER PTHR24220 4 241 1.7E-169 T 22-04-2016 LK04_RS12220 b1d4f6e92f9748b346321330f955505b 242 Pfam PF00005 ABC transporter 20 170 3.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 SUPERFAMILY SSF53223 5 270 1.29E-111 T 22-04-2016 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 SMART SM00919 271 531 1.5E-135 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 PRINTS PR00072 Malic enzyme signature 87 111 5.6E-75 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 PRINTS PR00072 Malic enzyme signature 408 424 5.6E-75 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 PRINTS PR00072 Malic enzyme signature 298 314 5.6E-75 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 PRINTS PR00072 Malic enzyme signature 183 205 5.6E-75 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 PRINTS PR00072 Malic enzyme signature 242 260 5.6E-75 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 PRINTS PR00072 Malic enzyme signature 267 283 5.6E-75 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 PRINTS PR00072 Malic enzyme signature 147 176 5.6E-75 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 PANTHER PTHR23406:SF25 1 565 0.0 T 22-04-2016 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 7.8E-103 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 SUPERFAMILY SSF51735 271 562 7.09E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 Gene3D G3DSA:3.40.50.10380 17 268 7.6E-119 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 5.1E-82 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 Gene3D G3DSA:3.40.50.720 269 562 1.1E-108 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 PIRSF PIRSF000106 4 563 7.4E-229 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 SMART SM01274 81 261 5.3E-113 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 PANTHER PTHR23406 1 565 0.0 T 22-04-2016 LK04_RS05865 de514fe8783e84aeeced2b17628479e1 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.217 T 22-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 Gene3D G3DSA:3.30.420.40 245 482 8.5E-51 T 22-04-2016 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 PIRSF PIRSF000538 1 487 4.8E-144 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 4.0E-180 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 SUPERFAMILY SSF53067 245 483 5.58E-58 T 22-04-2016 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 128 140 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 PANTHER PTHR10196:SF72 1 479 5.0E-191 T 22-04-2016 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 SUPERFAMILY SSF53067 2 246 6.55E-80 T 22-04-2016 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 243 1.8E-81 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 Gene3D G3DSA:3.30.420.40 1 243 4.1E-74 T 22-04-2016 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 438 6.0E-35 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LK04_RS05425 3d6aa3d6121acfc6469a2dbf931f23ec 489 PANTHER PTHR10196 1 479 5.0E-191 T 22-04-2016 LK04_RS01055 9e36a9ee1ebcea18a79c16d1b2011225 191 Gene3D G3DSA:3.90.870.10 9 191 3.4E-53 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LK04_RS01055 9e36a9ee1ebcea18a79c16d1b2011225 191 PANTHER PTHR17490 10 186 2.9E-100 T 22-04-2016 LK04_RS01055 9e36a9ee1ebcea18a79c16d1b2011225 191 PANTHER PTHR17490:SF8 10 186 2.9E-100 T 22-04-2016 LK04_RS01055 9e36a9ee1ebcea18a79c16d1b2011225 191 Pfam PF01300 Telomere recombination 17 191 3.7E-42 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 LK04_RS01055 9e36a9ee1ebcea18a79c16d1b2011225 191 SUPERFAMILY SSF55821 8 188 2.32E-55 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LK04_RS01055 9e36a9ee1ebcea18a79c16d1b2011225 191 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 8 189 40.139 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 Gene3D G3DSA:3.40.47.10 221 300 2.7E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 Gene3D G3DSA:3.40.47.10 15 134 2.7E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 6.8E-127 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 8 436 1.2E-245 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 68.062 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 SUPERFAMILY SSF53901 15 295 1.66E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 PIRSF PIRSF000429 9 436 2.1E-119 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 PANTHER PTHR18919 10 436 2.3E-184 T 22-04-2016 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 SUPERFAMILY SSF53901 297 434 1.0E-32 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 Gene3D G3DSA:3.40.47.10 302 435 1.5E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 Gene3D G3DSA:3.40.47.10 175 220 1.5E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 PANTHER PTHR18919:SF5 10 436 2.3E-184 T 22-04-2016 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 9.3E-36 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LK04_RS05255 4039ccf163fb9d7cec9c76469f872140 436 Pfam PF00108 Thiolase, N-terminal domain 15 287 1.7E-58 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LK04_RS05905 5e4a169be1ba090903d86da8e9966652 187 Pfam PF00578 AhpC/TSA family 11 133 1.8E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LK04_RS05905 5e4a169be1ba090903d86da8e9966652 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LK04_RS05905 5e4a169be1ba090903d86da8e9966652 187 PIRSF PIRSF000239 1 187 4.1E-50 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 LK04_RS05905 5e4a169be1ba090903d86da8e9966652 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.7E-103 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LK04_RS05905 5e4a169be1ba090903d86da8e9966652 187 PANTHER PTHR10681 1 187 1.8E-92 T 22-04-2016 LK04_RS05905 5e4a169be1ba090903d86da8e9966652 187 PANTHER PTHR10681:SF121 1 187 1.8E-92 T 22-04-2016 LK04_RS05905 5e4a169be1ba090903d86da8e9966652 187 Gene3D G3DSA:3.40.30.10 4 183 1.9E-58 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05905 5e4a169be1ba090903d86da8e9966652 187 SUPERFAMILY SSF52833 1 186 5.87E-53 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 TIGRFAM TIGR00260 thrC: threonine synthase 53 397 2.8E-120 T 22-04-2016 IPR004450 Threonine synthase-like LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 SUPERFAMILY SSF53686 1 427 4.71E-135 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 Gene3D G3DSA:3.40.50.1100 197 402 2.6E-67 T 22-04-2016 LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 Pfam PF14821 Threonine synthase N terminus 8 80 1.5E-11 T 22-04-2016 IPR029144 Threonine synthase, N-terminal LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 PANTHER PTHR10314 53 427 3.4E-142 T 22-04-2016 LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 PANTHER PTHR10314 25 36 3.4E-142 T 22-04-2016 LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 PANTHER PTHR10314:SF1 53 427 3.4E-142 T 22-04-2016 LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 PANTHER PTHR10314:SF1 25 36 3.4E-142 T 22-04-2016 LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 Gene3D G3DSA:3.90.1380.10 1 84 1.1E-19 T 22-04-2016 IPR029144 Threonine synthase, N-terminal LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 Gene3D G3DSA:3.40.50.1100 106 196 1.3E-12 T 22-04-2016 LK04_RS15805 514c9bb39aaa3aba34e682bf0d3a54b9 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 369 5.2E-22 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS09345 5f9b3075b128765bedf713ff858a59fd 412 Pfam PF07690 Major Facilitator Superfamily 36 255 7.1E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS09345 5f9b3075b128765bedf713ff858a59fd 412 PANTHER PTHR23501:SF11 21 395 3.9E-132 T 22-04-2016 LK04_RS09345 5f9b3075b128765bedf713ff858a59fd 412 SUPERFAMILY SSF103473 25 407 3.14E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS09345 5f9b3075b128765bedf713ff858a59fd 412 PANTHER PTHR23501 21 395 3.9E-132 T 22-04-2016 LK04_RS09345 5f9b3075b128765bedf713ff858a59fd 412 Gene3D G3DSA:1.20.1250.20 33 214 1.4E-30 T 22-04-2016 LK04_RS09345 5f9b3075b128765bedf713ff858a59fd 412 Gene3D G3DSA:1.20.1250.20 235 407 2.7E-16 T 22-04-2016 LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 Gene3D G3DSA:3.50.50.60 7 232 1.0E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 SMART SM01228 546 617 4.3E-45 T 22-04-2016 LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.925 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 Pfam PF13932 GidA associated domain 403 616 7.4E-72 T 22-04-2016 IPR026904 GidA associated domain 3 LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 PANTHER PTHR11806 1 629 0.0 T 22-04-2016 LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 PANTHER PTHR11806:SF0 1 629 0.0 T 22-04-2016 LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 Pfam PF01134 Glucose inhibited division protein A 8 398 3.6E-170 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 6.0E-299 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 SUPERFAMILY SSF51905 97 261 7.97E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS19050 26e64b87bc5a659c8715e1e1569aeef4 629 SUPERFAMILY SSF51905 7 66 7.97E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 Pfam PF00072 Response regulator receiver domain 8 119 3.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 Gene3D G3DSA:3.40.50.2300 5 148 2.1E-37 T 22-04-2016 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 PANTHER PTHR26402 6 210 3.1E-92 T 22-04-2016 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 Gene3D G3DSA:1.10.10.10 149 207 5.0E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 PANTHER PTHR26402:SF458 6 210 3.1E-92 T 22-04-2016 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 SUPERFAMILY SSF52172 5 136 1.57E-33 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 SMART SM00448 6 119 5.0E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 SMART SM00421 147 204 9.4E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 SUPERFAMILY SSF46894 130 207 8.5E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 5.0E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 8.36E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 8.36E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS04475 348657699cefc5e147048f7eb5f00364 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 8.36E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS08285 d0594177fa22df2d50778c4e1038c4fe 235 PANTHER PTHR32119:SF2 3 235 9.3E-121 T 22-04-2016 LK04_RS08285 d0594177fa22df2d50778c4e1038c4fe 235 Gene3D G3DSA:3.20.20.70 6 232 2.8E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS08285 d0594177fa22df2d50778c4e1038c4fe 235 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 5 233 39.751 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS08285 d0594177fa22df2d50778c4e1038c4fe 235 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS08285 d0594177fa22df2d50778c4e1038c4fe 235 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 227 1.7E-54 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS08285 d0594177fa22df2d50778c4e1038c4fe 235 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 9 228 2.0E-57 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS08285 d0594177fa22df2d50778c4e1038c4fe 235 PANTHER PTHR32119 3 235 9.3E-121 T 22-04-2016 LK04_RS08285 d0594177fa22df2d50778c4e1038c4fe 235 SMART SM00934 7 228 4.4E-99 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS08285 d0594177fa22df2d50778c4e1038c4fe 235 SUPERFAMILY SSF51366 5 231 3.24E-80 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 226.895 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 SUPERFAMILY SSF52821 390 481 1.51E-10 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 6.2E-42 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 Pfam PF02926 THUMP domain 46 162 3.0E-25 T 22-04-2016 IPR004114 THUMP domain GO:0003723 LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 Gene3D G3DSA:3.40.250.10 398 480 1.3E-8 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 PANTHER PTHR14911:SF15 3 417 1.6E-273 T 22-04-2016 LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 370 1.7E-132 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.8E-78 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 PANTHER PTHR14911 3 417 1.6E-273 T 22-04-2016 LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 Gene3D G3DSA:3.40.50.620 173 333 3.5E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 SMART SM00981 75 165 1.8E-24 T 22-04-2016 IPR004114 THUMP domain GO:0003723 LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 SUPERFAMILY SSF52402 174 372 1.15E-41 T 22-04-2016 LK04_RS14065 71ee4c4bb5d8d2593885047f98eb566a 482 SUPERFAMILY SSF143437 1 173 2.62E-48 T 22-04-2016 LK04_RS00950 6f25c626b862348ff20c0bd35272d4f7 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.151 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00950 6f25c626b862348ff20c0bd35272d4f7 117 Gene3D G3DSA:3.30.420.100 24 117 1.5E-36 T 22-04-2016 LK04_RS00950 6f25c626b862348ff20c0bd35272d4f7 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.4E-47 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00950 6f25c626b862348ff20c0bd35272d4f7 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.2E-44 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00950 6f25c626b862348ff20c0bd35272d4f7 117 SUPERFAMILY SSF53137 3 115 8.29E-54 T 22-04-2016 LK04_RS00950 6f25c626b862348ff20c0bd35272d4f7 117 PANTHER PTHR12899 1 117 4.9E-50 T 22-04-2016 LK04_RS06450 f54ae1cb7ad0f0ae53b17af28971d7e7 62 SUPERFAMILY SSF54786 1 59 5.89E-17 T 22-04-2016 LK04_RS06450 f54ae1cb7ad0f0ae53b17af28971d7e7 62 Gene3D G3DSA:3.30.920.30 1 59 4.6E-23 T 22-04-2016 LK04_RS06450 f54ae1cb7ad0f0ae53b17af28971d7e7 62 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 6 59 2.9E-20 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 SUPERFAMILY SSF118215 7 399 2.62E-121 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 PANTHER PTHR11958 5 414 3.1E-261 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 PANTHER PTHR11958:SF49 5 414 3.1E-261 T 22-04-2016 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 1 426 38.102 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 Gene3D G3DSA:1.10.3860.10 5 405 1.6E-119 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 Pfam PF00375 Sodium:dicarboxylate symporter family 7 399 1.7E-115 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 293 316 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 34 49 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 PRINTS PR00173 Glutamate-aspartate symporter signature 190 209 2.8E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 2.8E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 PRINTS PR00173 Glutamate-aspartate symporter signature 72 97 2.8E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 PRINTS PR00173 Glutamate-aspartate symporter signature 143 165 2.8E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 2.8E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS18245 131f7a1895f5cda36e8236d446a8e1d8 426 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 2.8E-29 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS09385 ea69af921ee9a273a19c506a10de5c19 472 PANTHER PTHR30068 2 471 9.8E-275 T 22-04-2016 LK04_RS09385 ea69af921ee9a273a19c506a10de5c19 472 Pfam PF02614 Glucuronate isomerase 1 467 1.6E-216 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 LK04_RS09385 ea69af921ee9a273a19c506a10de5c19 472 Gene3D G3DSA:3.20.20.140 3 44 4.4E-158 T 22-04-2016 LK04_RS09385 ea69af921ee9a273a19c506a10de5c19 472 Gene3D G3DSA:3.20.20.140 140 469 4.4E-158 T 22-04-2016 LK04_RS09385 ea69af921ee9a273a19c506a10de5c19 472 Gene3D G3DSA:1.10.2020.10 46 137 6.0E-40 T 22-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 LK04_RS09385 ea69af921ee9a273a19c506a10de5c19 472 Hamap MF_00675 Uronate isomerase [uxaC]. 2 469 49.77 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 LK04_RS09385 ea69af921ee9a273a19c506a10de5c19 472 PANTHER PTHR30068:SF4 2 471 9.8E-275 T 22-04-2016 LK04_RS09385 ea69af921ee9a273a19c506a10de5c19 472 SUPERFAMILY SSF51556 2 467 5.85E-178 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS02725 bfcc7bc1698d4d70ebe64cf45412df3d 138 Pfam PF03652 Holliday junction resolvase 5 136 1.9E-43 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LK04_RS02725 bfcc7bc1698d4d70ebe64cf45412df3d 138 Gene3D G3DSA:3.30.420.140 4 137 4.4E-48 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LK04_RS02725 bfcc7bc1698d4d70ebe64cf45412df3d 138 SMART SM00732 4 104 9.1E-43 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LK04_RS02725 bfcc7bc1698d4d70ebe64cf45412df3d 138 PANTHER PTHR33317 5 136 1.3E-47 T 22-04-2016 LK04_RS02725 bfcc7bc1698d4d70ebe64cf45412df3d 138 SUPERFAMILY SSF53098 5 137 6.98E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS02725 bfcc7bc1698d4d70ebe64cf45412df3d 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 1.7E-60 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LK04_RS02725 bfcc7bc1698d4d70ebe64cf45412df3d 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 138 24.191 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 Pfam PF00005 ABC transporter 17 178 7.1E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 Pfam PF00005 ABC transporter 328 459 7.8E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 SUPERFAMILY SSF52540 295 510 1.68E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 Gene3D G3DSA:3.40.50.300 1 265 2.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 Gene3D G3DSA:3.40.50.300 310 540 5.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 SUPERFAMILY SSF52540 119 254 4.22E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 SUPERFAMILY SSF52540 2 92 4.22E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 Pfam PF12848 ABC transporter 217 295 9.3E-27 T 22-04-2016 IPR032781 ABC-transporter extension domain LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 PANTHER PTHR19211:SF49 1 555 0.0 T 22-04-2016 LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 SMART SM00382 26 223 8.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS00780 6483e23d466f8bd0d290d0cde5e98f40 634 SMART SM00382 337 506 6.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS17890 8540727a8501dcfc09c455ce11dbe6f2 443 PANTHER PTHR10804:SF101 6 440 6.8E-236 T 22-04-2016 LK04_RS17890 8540727a8501dcfc09c455ce11dbe6f2 443 Pfam PF00557 Metallopeptidase family M24 168 429 9.2E-45 T 22-04-2016 IPR000994 Peptidase M24, structural domain LK04_RS17890 8540727a8501dcfc09c455ce11dbe6f2 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 57.863 T 22-04-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 LK04_RS17890 8540727a8501dcfc09c455ce11dbe6f2 443 SUPERFAMILY SSF55920 163 438 2.22E-55 T 22-04-2016 IPR000994 Peptidase M24, structural domain LK04_RS17890 8540727a8501dcfc09c455ce11dbe6f2 443 PANTHER PTHR10804 6 440 6.8E-236 T 22-04-2016 LK04_RS17890 8540727a8501dcfc09c455ce11dbe6f2 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LK04_RS17890 8540727a8501dcfc09c455ce11dbe6f2 443 Gene3D G3DSA:3.90.230.10 161 437 5.5E-52 T 22-04-2016 IPR000994 Peptidase M24, structural domain LK04_RS00035 68ea61203a0f9cbbe8167bd893abf898 513 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 428 3.7E-91 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS00035 68ea61203a0f9cbbe8167bd893abf898 513 PANTHER PTHR30290 17 513 1.3E-131 T 22-04-2016 LK04_RS00035 68ea61203a0f9cbbe8167bd893abf898 513 PIRSF PIRSF002741 16 513 2.1E-103 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS00035 68ea61203a0f9cbbe8167bd893abf898 513 Gene3D G3DSA:3.90.76.10 35 184 1.9E-38 T 22-04-2016 LK04_RS00035 68ea61203a0f9cbbe8167bd893abf898 513 Gene3D G3DSA:3.10.105.10 282 482 1.5E-58 T 22-04-2016 LK04_RS00035 68ea61203a0f9cbbe8167bd893abf898 513 SUPERFAMILY SSF53850 25 510 4.71E-136 T 22-04-2016 LK04_RS00035 68ea61203a0f9cbbe8167bd893abf898 513 Gene3D G3DSA:3.40.190.10 185 281 1.9E-41 T 22-04-2016 LK04_RS19885 68ea61203a0f9cbbe8167bd893abf898 513 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 428 3.7E-91 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS19885 68ea61203a0f9cbbe8167bd893abf898 513 PANTHER PTHR30290 17 513 1.3E-131 T 22-04-2016 LK04_RS19885 68ea61203a0f9cbbe8167bd893abf898 513 PIRSF PIRSF002741 16 513 2.1E-103 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS19885 68ea61203a0f9cbbe8167bd893abf898 513 Gene3D G3DSA:3.90.76.10 35 184 1.9E-38 T 22-04-2016 LK04_RS19885 68ea61203a0f9cbbe8167bd893abf898 513 Gene3D G3DSA:3.10.105.10 282 482 1.5E-58 T 22-04-2016 LK04_RS19885 68ea61203a0f9cbbe8167bd893abf898 513 SUPERFAMILY SSF53850 25 510 4.71E-136 T 22-04-2016 LK04_RS19885 68ea61203a0f9cbbe8167bd893abf898 513 Gene3D G3DSA:3.40.190.10 185 281 1.9E-41 T 22-04-2016 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 3.6E-143 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 PANTHER PTHR13789 1 392 7.5E-189 T 22-04-2016 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 6.6E-134 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 PANTHER PTHR13789:SF214 1 392 7.5E-189 T 22-04-2016 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 Pfam PF01494 FAD binding domain 3 318 3.4E-22 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.0E-12 T 22-04-2016 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.0E-12 T 22-04-2016 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.0E-12 T 22-04-2016 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.0E-12 T 22-04-2016 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 Gene3D G3DSA:3.50.50.60 2 180 3.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 Gene3D G3DSA:3.50.50.60 266 355 3.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 SUPERFAMILY SSF51905 265 381 1.7E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02960 803e810f9272c07cb0cf1173d2456f4f 392 SUPERFAMILY SSF51905 2 175 1.7E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS17670 a7fe12be1f3234a9db6ec595fc5b59f8 433 Pfam PF00463 Isocitrate lyase family 256 429 8.7E-47 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 LK04_RS17670 a7fe12be1f3234a9db6ec595fc5b59f8 433 Pfam PF00463 Isocitrate lyase family 8 254 1.0E-61 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 LK04_RS17670 a7fe12be1f3234a9db6ec595fc5b59f8 433 PIRSF PIRSF001362 1 433 9.4E-224 T 22-04-2016 LK04_RS17670 a7fe12be1f3234a9db6ec595fc5b59f8 433 SUPERFAMILY SSF51621 3 416 5.89E-153 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS17670 a7fe12be1f3234a9db6ec595fc5b59f8 433 PANTHER PTHR21631 1 433 1.8E-169 T 22-04-2016 LK04_RS17670 a7fe12be1f3234a9db6ec595fc5b59f8 433 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 254 1.0E-115 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 LK04_RS17670 a7fe12be1f3234a9db6ec595fc5b59f8 433 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 255 433 1.3E-85 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 LK04_RS17670 a7fe12be1f3234a9db6ec595fc5b59f8 433 ProSitePatterns PS00161 Isocitrate lyase signature. 192 197 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 LK04_RS17670 a7fe12be1f3234a9db6ec595fc5b59f8 433 Gene3D G3DSA:3.20.20.60 4 416 1.6E-168 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 113 123 1.2E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 124 135 1.2E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 152 164 1.2E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 Gene3D G3DSA:1.10.10.10 1 69 7.2E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 Pfam PF00717 Peptidase S24-like 116 182 2.5E-13 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 SUPERFAMILY SSF51306 78 199 1.74E-36 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 Hamap MF_00015 LexA repressor [lexA]. 3 201 32.045 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 PANTHER PTHR33516:SF2 1 204 7.0E-102 T 22-04-2016 LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 Gene3D G3DSA:2.10.109.10 78 200 3.5E-44 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 SUPERFAMILY SSF46785 3 69 1.47E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 TIGRFAM TIGR00498 lexA: repressor LexA 1 201 7.3E-83 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 PANTHER PTHR33516 1 204 7.0E-102 T 22-04-2016 LK04_RS17340 f6493936b5c8a121b20edc2b9ca77d99 204 Pfam PF01726 LexA DNA binding domain 1 65 1.3E-29 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 LK04_RS03670 794b14ee3b323b424953ccf354c54b17 173 Gene3D G3DSA:3.40.630.30 3 168 2.4E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS03670 794b14ee3b323b424953ccf354c54b17 173 SUPERFAMILY SSF55729 3 170 6.1E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS03670 794b14ee3b323b424953ccf354c54b17 173 PANTHER PTHR13256 3 148 2.4E-20 T 22-04-2016 LK04_RS03670 794b14ee3b323b424953ccf354c54b17 173 Pfam PF13302 Acetyltransferase (GNAT) domain 7 147 3.3E-20 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 Pfam PF03707 Bacterial signalling protein N terminal repeat 182 243 1.5E-8 T 22-04-2016 IPR005330 MHYT domain LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 109 7.2E-18 T 22-04-2016 IPR005330 MHYT domain LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 Pfam PF03707 Bacterial signalling protein N terminal repeat 116 169 3.1E-13 T 22-04-2016 IPR005330 MHYT domain LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 417 1.7E-41 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 PANTHER PTHR33121:SF13 380 677 6.5E-69 T 22-04-2016 LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 Gene3D G3DSA:3.30.70.270 261 427 8.6E-55 T 22-04-2016 LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 SUPERFAMILY SSF141868 436 681 3.4E-81 T 22-04-2016 IPR001633 EAL domain LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 SMART SM00052 430 676 9.4E-105 T 22-04-2016 IPR001633 EAL domain LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 Pfam PF00563 EAL domain 437 671 2.5E-68 T 22-04-2016 IPR001633 EAL domain LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 Gene3D G3DSA:3.20.20.450 433 681 2.6E-88 T 22-04-2016 IPR001633 EAL domain LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 PANTHER PTHR33121 380 677 6.5E-69 T 22-04-2016 LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 SUPERFAMILY SSF55073 265 421 1.41E-48 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 Pfam PF00990 Diguanylate cyclase, GGDEF domain 260 415 3.6E-46 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02150 c6258ba2439424220e81d6711d3a8e9f 700 SMART SM00267 249 420 2.4E-60 T 22-04-2016 IPR000160 GGDEF domain LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 PANTHER PTHR11609:SF7 1 382 2.9E-219 T 22-04-2016 LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 SUPERFAMILY SSF56059 113 314 1.01E-55 T 22-04-2016 LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.453 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 Gene3D G3DSA:3.40.50.20 5 120 1.8E-39 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 Pfam PF02222 ATP-grasp domain 123 295 2.1E-55 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 Gene3D G3DSA:3.30.470.20 200 387 1.6E-67 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 1.2E-187 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 SUPERFAMILY SSF51246 319 391 1.35E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 Gene3D G3DSA:3.30.1490.20 123 199 3.4E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 SUPERFAMILY SSF52440 3 112 1.44E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS07475 431720a7554e9787a91b4d2524b20df7 392 PANTHER PTHR11609 1 382 2.9E-219 T 22-04-2016 LK04_RS18195 4334b9e4c333820333e573943327b39e 110 SUPERFAMILY SSF52833 2 109 3.65E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS18195 4334b9e4c333820333e573943327b39e 110 ProSitePatterns PS00194 Thioredoxin family active site. 26 44 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LK04_RS18195 4334b9e4c333820333e573943327b39e 110 PRINTS PR00421 Thioredoxin family signature 25 33 8.6E-10 T 22-04-2016 LK04_RS18195 4334b9e4c333820333e573943327b39e 110 PRINTS PR00421 Thioredoxin family signature 73 84 8.6E-10 T 22-04-2016 LK04_RS18195 4334b9e4c333820333e573943327b39e 110 PRINTS PR00421 Thioredoxin family signature 33 42 8.6E-10 T 22-04-2016 LK04_RS18195 4334b9e4c333820333e573943327b39e 110 Gene3D G3DSA:3.40.30.10 3 109 2.0E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS18195 4334b9e4c333820333e573943327b39e 110 PIRSF PIRSF000077 3 109 2.1E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LK04_RS18195 4334b9e4c333820333e573943327b39e 110 PANTHER PTHR10438 1 110 2.7E-40 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LK04_RS18195 4334b9e4c333820333e573943327b39e 110 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 108 7.5E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LK04_RS18195 4334b9e4c333820333e573943327b39e 110 Pfam PF00085 Thioredoxin 6 107 8.7E-34 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 LK04_RS16610 d0aca2a77e93d1736d43ce983d404d44 188 PANTHER PTHR21485 10 186 3.4E-66 T 22-04-2016 LK04_RS16610 d0aca2a77e93d1736d43ce983d404d44 188 Gene3D G3DSA:3.40.50.1000 16 182 1.6E-48 T 22-04-2016 IPR023214 HAD-like domain LK04_RS16610 d0aca2a77e93d1736d43ce983d404d44 188 SUPERFAMILY SSF56784 22 180 2.1E-41 T 22-04-2016 IPR023214 HAD-like domain LK04_RS16610 d0aca2a77e93d1736d43ce983d404d44 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 158 9.9E-10 T 22-04-2016 IPR023214 HAD-like domain LK04_RS16610 d0aca2a77e93d1736d43ce983d404d44 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 179 1.6E-69 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LK04_RS16610 d0aca2a77e93d1736d43ce983d404d44 188 PIRSF PIRSF006118 13 188 1.7E-73 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LK04_RS03440 211e9d9af914e7c38c6bea60bfb010ee 119 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 118 3.4E-35 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein LK04_RS03440 211e9d9af914e7c38c6bea60bfb010ee 119 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 3 118 1.3E-37 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein LK04_RS03440 211e9d9af914e7c38c6bea60bfb010ee 119 Gene3D G3DSA:3.30.479.10 2 118 5.5E-41 T 22-04-2016 LK04_RS03440 211e9d9af914e7c38c6bea60bfb010ee 119 PANTHER PTHR12589 5 119 2.7E-52 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein LK04_RS03440 211e9d9af914e7c38c6bea60bfb010ee 119 PIRSF PIRSF006113 1 119 5.7E-55 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein LK04_RS03440 211e9d9af914e7c38c6bea60bfb010ee 119 SUPERFAMILY SSF55620 3 119 1.72E-41 T 22-04-2016 LK04_RS03440 211e9d9af914e7c38c6bea60bfb010ee 119 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 4.2E-34 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein LK04_RS16360 9b3a035bf0c216c1bcefd899f75922d7 305 PANTHER PTHR11019:SF81 31 299 3.6E-65 T 22-04-2016 LK04_RS16360 9b3a035bf0c216c1bcefd899f75922d7 305 Gene3D G3DSA:1.10.10.60 246 288 1.6E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS16360 9b3a035bf0c216c1bcefd899f75922d7 305 Pfam PF12833 Helix-turn-helix domain 214 289 1.6E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS16360 9b3a035bf0c216c1bcefd899f75922d7 305 SUPERFAMILY SSF46689 244 292 8.51E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS16360 9b3a035bf0c216c1bcefd899f75922d7 305 SMART SM00342 208 291 2.0E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS16360 9b3a035bf0c216c1bcefd899f75922d7 305 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 179 9.0E-40 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal LK04_RS16360 9b3a035bf0c216c1bcefd899f75922d7 305 PANTHER PTHR11019 31 299 3.6E-65 T 22-04-2016 LK04_RS16360 9b3a035bf0c216c1bcefd899f75922d7 305 SUPERFAMILY SSF46689 192 242 8.53E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS16360 9b3a035bf0c216c1bcefd899f75922d7 305 Gene3D G3DSA:1.10.10.60 191 245 2.5E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 Pfam PF00005 ABC transporter 277 432 8.7E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 Pfam PF00005 ABC transporter 22 172 2.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 SUPERFAMILY SSF52540 5 230 3.86E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 SUPERFAMILY SSF52540 259 491 2.04E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 PANTHER PTHR24220:SF308 8 387 6.3E-167 T 22-04-2016 LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 PANTHER PTHR24220 8 387 6.3E-167 T 22-04-2016 LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 SMART SM00382 285 481 0.0012 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 SMART SM00382 31 220 6.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 Gene3D G3DSA:3.40.50.300 259 492 1.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11025 a67bea3da8db7cf0142b36b5f7fdcab2 504 Gene3D G3DSA:3.40.50.300 3 230 2.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00535 0e0f59bbae458c0da122d2de5f72c5b5 258 SUPERFAMILY SSF53474 4 255 5.72E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS00535 0e0f59bbae458c0da122d2de5f72c5b5 258 Gene3D G3DSA:3.40.50.1820 4 256 2.4E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS00535 0e0f59bbae458c0da122d2de5f72c5b5 258 PANTHER PTHR10992:SF812 4 255 7.8E-118 T 22-04-2016 LK04_RS00535 0e0f59bbae458c0da122d2de5f72c5b5 258 PANTHER PTHR10992 4 255 7.8E-118 T 22-04-2016 LK04_RS00535 0e0f59bbae458c0da122d2de5f72c5b5 258 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.753 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 LK04_RS00535 0e0f59bbae458c0da122d2de5f72c5b5 258 Pfam PF00561 alpha/beta hydrolase fold 16 242 4.9E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS00535 0e0f59bbae458c0da122d2de5f72c5b5 258 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 253 1.3E-104 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 LK04_RS01610 95348be70c0635a1e3bd9939be8cedff 287 SUPERFAMILY SSF53790 13 232 1.03E-82 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LK04_RS01610 95348be70c0635a1e3bd9939be8cedff 287 PANTHER PTHR21091 12 234 6.4E-91 T 22-04-2016 LK04_RS01610 95348be70c0635a1e3bd9939be8cedff 287 PIRSF PIRSF005917 2 287 4.1E-105 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS01610 95348be70c0635a1e3bd9939be8cedff 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 2.8E-26 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LK04_RS01610 95348be70c0635a1e3bd9939be8cedff 287 Gene3D G3DSA:3.40.1010.10 13 121 5.9E-16 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LK04_RS01610 95348be70c0635a1e3bd9939be8cedff 287 Gene3D G3DSA:3.30.950.10 122 236 3.2E-42 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LK04_RS01610 95348be70c0635a1e3bd9939be8cedff 287 PANTHER PTHR21091:SF18 12 234 6.4E-91 T 22-04-2016 LK04_RS01610 95348be70c0635a1e3bd9939be8cedff 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 8.6E-108 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS01610 95348be70c0635a1e3bd9939be8cedff 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS01610 95348be70c0635a1e3bd9939be8cedff 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 37.42 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 SUPERFAMILY SSF55920 175 434 2.36E-86 T 22-04-2016 IPR000994 Peptidase M24, structural domain LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 SMART SM01011 1 136 1.1E-57 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 5.6E-6 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 PRINTS PR00599 Methionine aminopeptidase-1 signature 371 383 5.6E-6 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 Gene3D G3DSA:3.40.350.10 2 178 6.8E-54 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 SUPERFAMILY SSF53092 2 174 2.09E-53 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 1.2E-36 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 Gene3D G3DSA:3.90.230.10 179 434 4.2E-87 T 22-04-2016 IPR000994 Peptidase M24, structural domain LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 Pfam PF00557 Metallopeptidase family M24 181 412 1.2E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 PANTHER PTHR10804 1 434 7.2E-160 T 22-04-2016 LK04_RS02955 096ff6131ea43577e157eda74e746cf2 439 PANTHER PTHR10804:SF17 1 434 7.2E-160 T 22-04-2016 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 6 366 2.3E-188 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 SUPERFAMILY SSF102114 7 318 1.57E-77 T 22-04-2016 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 Pfam PF04055 Radical SAM superfamily 17 172 2.1E-23 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 Gene3D G3DSA:3.20.20.70 9 327 4.4E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 PANTHER PTHR11228:SF32 2 346 2.9E-109 T 22-04-2016 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 377 190.514 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 252 336 4.0E-7 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 Pfam PF13186 Iron-sulfur cluster-binding domain 244 309 2.2E-6 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 Pfam PF13353 4Fe-4S single cluster domain 18 93 1.6E-5 T 22-04-2016 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 PIRSF PIRSF037420 2 358 8.5E-134 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 PANTHER PTHR11228 2 346 2.9E-109 T 22-04-2016 LK04_RS09545 a0b39a4ba52f862bfa3557e579dbabed 379 SMART SM00729 11 214 2.5E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 6.7E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 SUPERFAMILY SSF53623 105 338 2.62E-79 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 8.3E-26 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 PANTHER PTHR23135:SF4 9 491 1.2E-223 T 22-04-2016 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 1.9E-168 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 SUPERFAMILY SSF53244 339 491 5.8E-51 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 35.055 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 Pfam PF08245 Mur ligase middle domain 114 318 2.4E-52 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 PANTHER PTHR23135 9 491 1.2E-223 T 22-04-2016 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 Gene3D G3DSA:3.40.1190.10 105 342 7.8E-81 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 Gene3D G3DSA:3.90.190.20 343 485 5.4E-58 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 Gene3D G3DSA:3.40.1390.10 4 104 3.0E-33 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15430 20bd0f48c33d7cd0d1934f25482fcb4e 495 SUPERFAMILY SSF63418 5 103 1.14E-23 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS17970 24f588d3f72eccb2d9f2a01d1e465106 253 PANTHER PTHR21234:SF22 1 253 1.2E-184 T 22-04-2016 LK04_RS17970 24f588d3f72eccb2d9f2a01d1e465106 253 Gene3D G3DSA:3.40.50.1580 5 252 2.4E-84 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS17970 24f588d3f72eccb2d9f2a01d1e465106 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 1.5E-121 T 22-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 LK04_RS17970 24f588d3f72eccb2d9f2a01d1e465106 253 PANTHER PTHR21234 1 253 1.2E-184 T 22-04-2016 IPR018017 Nucleoside phosphorylase LK04_RS17970 24f588d3f72eccb2d9f2a01d1e465106 253 SUPERFAMILY SSF53167 7 250 8.64E-74 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS17970 24f588d3f72eccb2d9f2a01d1e465106 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 LK04_RS17970 24f588d3f72eccb2d9f2a01d1e465106 253 Pfam PF01048 Phosphorylase superfamily 21 242 3.1E-41 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS19510 93acaf6ae15efb35d3297dc2dc69718d 271 PANTHER PTHR23416:SF2 5 258 7.4E-157 T 22-04-2016 LK04_RS19510 93acaf6ae15efb35d3297dc2dc69718d 271 SUPERFAMILY SSF51161 8 260 1.07E-67 T 22-04-2016 IPR011004 Trimeric LpxA-like LK04_RS19510 93acaf6ae15efb35d3297dc2dc69718d 271 Gene3D G3DSA:2.160.10.10 143 251 5.2E-32 T 22-04-2016 LK04_RS19510 93acaf6ae15efb35d3297dc2dc69718d 271 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 5.4E-39 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 LK04_RS19510 93acaf6ae15efb35d3297dc2dc69718d 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 5.9E-10 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS19510 93acaf6ae15efb35d3297dc2dc69718d 271 Gene3D G3DSA:1.10.3130.10 7 142 6.4E-51 T 22-04-2016 LK04_RS19510 93acaf6ae15efb35d3297dc2dc69718d 271 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 1.1E-74 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 LK04_RS19510 93acaf6ae15efb35d3297dc2dc69718d 271 SMART SM00971 9 113 1.6E-62 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 LK04_RS19510 93acaf6ae15efb35d3297dc2dc69718d 271 PANTHER PTHR23416 5 258 7.4E-157 T 22-04-2016 LK04_RS19510 93acaf6ae15efb35d3297dc2dc69718d 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LK04_RS03335 a505099796e932f309fd8c4e100f46f8 281 Pfam PF14489 QueF-like protein 195 267 6.6E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS03335 a505099796e932f309fd8c4e100f46f8 281 PIRSF PIRSF004750 6 281 9.2E-123 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS03335 a505099796e932f309fd8c4e100f46f8 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 158.432 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS03335 a505099796e932f309fd8c4e100f46f8 281 SUPERFAMILY SSF55620 186 269 3.34E-8 T 22-04-2016 LK04_RS03335 a505099796e932f309fd8c4e100f46f8 281 Gene3D G3DSA:3.30.1130.10 145 281 3.3E-53 T 22-04-2016 LK04_RS03335 a505099796e932f309fd8c4e100f46f8 281 PANTHER PTHR34354 2 281 2.9E-102 T 22-04-2016 LK04_RS03335 a505099796e932f309fd8c4e100f46f8 281 Gene3D G3DSA:3.30.1130.10 21 137 3.7E-41 T 22-04-2016 LK04_RS03335 a505099796e932f309fd8c4e100f46f8 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 3.9E-47 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS03335 a505099796e932f309fd8c4e100f46f8 281 PANTHER PTHR34354:SF1 2 281 2.9E-102 T 22-04-2016 LK04_RS03335 a505099796e932f309fd8c4e100f46f8 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 1.1E-124 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 SUPERFAMILY SSF46785 1 87 7.26E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 Gene3D G3DSA:3.40.190.10 83 190 1.1E-17 T 22-04-2016 LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 PANTHER PTHR30346 1 282 5.2E-56 T 22-04-2016 LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 Gene3D G3DSA:3.40.190.10 191 258 2.5E-12 T 22-04-2016 LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 Gene3D G3DSA:1.10.10.10 1 82 1.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 Pfam PF03466 LysR substrate binding domain 87 269 9.2E-29 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 SUPERFAMILY SSF53850 88 283 3.16E-27 T 22-04-2016 LK04_RS07135 dc5e39771291e0fc01ac31497914063e 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.2E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS03035 fa00ed7cab6c00f18b8dc74f95aa6014 237 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LK04_RS03035 fa00ed7cab6c00f18b8dc74f95aa6014 237 PANTHER PTHR35272:SF3 1 237 1.7E-98 T 22-04-2016 LK04_RS03035 fa00ed7cab6c00f18b8dc74f95aa6014 237 SUPERFAMILY SSF54423 23 81 1.15E-18 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal LK04_RS03035 fa00ed7cab6c00f18b8dc74f95aa6014 237 SUPERFAMILY SSF52833 90 231 9.15E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS03035 fa00ed7cab6c00f18b8dc74f95aa6014 237 Pfam PF13098 Thioredoxin-like domain 105 230 2.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS03035 fa00ed7cab6c00f18b8dc74f95aa6014 237 Gene3D G3DSA:3.40.30.10 99 232 2.0E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS03035 fa00ed7cab6c00f18b8dc74f95aa6014 237 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 8.8E-16 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal LK04_RS03035 fa00ed7cab6c00f18b8dc74f95aa6014 237 PANTHER PTHR35272 1 237 1.7E-98 T 22-04-2016 LK04_RS03035 fa00ed7cab6c00f18b8dc74f95aa6014 237 Gene3D G3DSA:3.10.450.70 22 82 3.9E-27 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal LK04_RS19160 589ea4a6aa5e06b13b4b82ad7bfeebcc 191 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 2 187 30.006 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 LK04_RS19160 589ea4a6aa5e06b13b4b82ad7bfeebcc 191 PANTHER PTHR19136 1 191 1.6E-54 T 22-04-2016 LK04_RS19160 589ea4a6aa5e06b13b4b82ad7bfeebcc 191 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 5 184 8.1E-71 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 LK04_RS19160 589ea4a6aa5e06b13b4b82ad7bfeebcc 191 SUPERFAMILY SSF53448 5 184 1.57E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS19160 589ea4a6aa5e06b13b4b82ad7bfeebcc 191 PANTHER PTHR19136:SF81 1 191 1.6E-54 T 22-04-2016 LK04_RS19160 589ea4a6aa5e06b13b4b82ad7bfeebcc 191 Gene3D G3DSA:3.90.550.10 1 185 2.4E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS19160 589ea4a6aa5e06b13b4b82ad7bfeebcc 191 Pfam PF12804 MobA-like NTP transferase domain 6 158 4.9E-38 T 22-04-2016 IPR025877 MobA-like NTP transferase LK04_RS00485 830c5a90f6441cce22e80e319897b465 298 PANTHER PTHR12110 9 294 5.1E-94 T 22-04-2016 LK04_RS00485 830c5a90f6441cce22e80e319897b465 298 Pfam PF01261 Xylose isomerase-like TIM barrel 37 250 5.0E-27 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS00485 830c5a90f6441cce22e80e319897b465 298 Hamap MF_01672 Inosose dehydratase [iolE]. 1 298 54.932 T 22-04-2016 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 LK04_RS00485 830c5a90f6441cce22e80e319897b465 298 PANTHER PTHR12110:SF4 9 294 5.1E-94 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 LK04_RS00485 830c5a90f6441cce22e80e319897b465 298 SUPERFAMILY SSF51658 7 294 6.02E-60 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS00485 830c5a90f6441cce22e80e319897b465 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 5 294 3.5E-119 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 LK04_RS00485 830c5a90f6441cce22e80e319897b465 298 Gene3D G3DSA:3.20.20.150 2 295 6.1E-85 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS13945 b283a20dbe2b932c85a3895117c22167 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 1.6E-83 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 LK04_RS13945 b283a20dbe2b932c85a3895117c22167 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 50.616 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 LK04_RS13945 b283a20dbe2b932c85a3895117c22167 231 PIRSF PIRSF006293 1 226 2.3E-85 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 LK04_RS13945 b283a20dbe2b932c85a3895117c22167 231 Gene3D G3DSA:3.40.50.620 1 218 1.9E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS13945 b283a20dbe2b932c85a3895117c22167 231 SUPERFAMILY SSF52402 1 214 4.85E-70 T 22-04-2016 LK04_RS13945 b283a20dbe2b932c85a3895117c22167 231 PANTHER PTHR11587:SF3 1 213 5.4E-104 T 22-04-2016 LK04_RS13945 b283a20dbe2b932c85a3895117c22167 231 PANTHER PTHR11587 1 213 5.4E-104 T 22-04-2016 LK04_RS13945 b283a20dbe2b932c85a3895117c22167 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 6.5E-85 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 LK04_RS08915 e527d8a87fbc9c1aa7a90390e2ea2004 333 PANTHER PTHR32196:SF35 1 333 2.4E-85 T 22-04-2016 LK04_RS08915 e527d8a87fbc9c1aa7a90390e2ea2004 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 311 7.3E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS08915 e527d8a87fbc9c1aa7a90390e2ea2004 333 PANTHER PTHR32196 1 333 2.4E-85 T 22-04-2016 LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 Pfam PF00773 RNB domain 189 516 9.5E-88 T 22-04-2016 LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 SUPERFAMILY SSF50249 180 555 1.71E-115 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 SUPERFAMILY SSF50249 83 171 2.66E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 Pfam PF08206 Ribonuclease B OB domain 24 80 1.4E-18 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 641 2.1E-223 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 SMART SM00357 23 79 2.2E-13 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 SMART SM00955 189 517 1.2E-125 T 22-04-2016 LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.187 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 SUPERFAMILY SSF50249 561 642 2.74E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 SUPERFAMILY SSF50249 9 80 2.33E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 PANTHER PTHR23355 23 642 0.0 T 22-04-2016 LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 Pfam PF00575 S1 RNA binding domain 561 636 6.4E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS08330 0c84721f16214a95e001007cc202e33d 644 PANTHER PTHR23355:SF37 23 642 0.0 T 22-04-2016 LK04_RS12695 49b32c604a4c645d94227912838f837c 355 Gene3D G3DSA:3.40.50.2300 76 171 1.0E-15 T 22-04-2016 LK04_RS12695 49b32c604a4c645d94227912838f837c 355 Pfam PF13377 Periplasmic binding protein-like domain 173 338 6.0E-16 T 22-04-2016 LK04_RS12695 49b32c604a4c645d94227912838f837c 355 SUPERFAMILY SSF53822 74 335 1.41E-33 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS12695 49b32c604a4c645d94227912838f837c 355 Gene3D G3DSA:3.40.50.2300 172 339 1.9E-29 T 22-04-2016 LK04_RS12695 49b32c604a4c645d94227912838f837c 355 SUPERFAMILY SSF47413 5 58 1.73E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS12695 49b32c604a4c645d94227912838f837c 355 Gene3D G3DSA:1.10.260.40 6 47 1.6E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS12695 49b32c604a4c645d94227912838f837c 355 PANTHER PTHR30146 4 353 2.0E-58 T 22-04-2016 LK04_RS12695 49b32c604a4c645d94227912838f837c 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 47 1.9E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS12695 49b32c604a4c645d94227912838f837c 355 PANTHER PTHR30146:SF4 4 353 2.0E-58 T 22-04-2016 LK04_RS13760 64b28275b11fbbd4232752ceb4956b3b 398 Pfam PF07690 Major Facilitator Superfamily 24 269 1.5E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS13760 64b28275b11fbbd4232752ceb4956b3b 398 Gene3D G3DSA:1.20.1250.20 223 392 4.0E-19 T 22-04-2016 LK04_RS13760 64b28275b11fbbd4232752ceb4956b3b 398 Gene3D G3DSA:1.20.1250.20 20 197 4.8E-22 T 22-04-2016 LK04_RS13760 64b28275b11fbbd4232752ceb4956b3b 398 PANTHER PTHR23505 3 397 1.0E-158 T 22-04-2016 LK04_RS13760 64b28275b11fbbd4232752ceb4956b3b 398 SUPERFAMILY SSF103473 8 392 9.42E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS13760 64b28275b11fbbd4232752ceb4956b3b 398 PANTHER PTHR23505:SF8 3 397 1.0E-158 T 22-04-2016 LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 Gene3D G3DSA:3.40.190.10 185 274 1.4E-10 T 22-04-2016 LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 Gene3D G3DSA:3.40.190.10 103 184 1.3E-18 T 22-04-2016 LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 SUPERFAMILY SSF46785 10 121 8.01E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 Gene3D G3DSA:1.10.10.10 11 94 2.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 SUPERFAMILY SSF53850 102 304 2.42E-33 T 22-04-2016 LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 PANTHER PTHR30419 6 303 7.8E-132 T 22-04-2016 LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 Pfam PF03466 LysR substrate binding domain 103 303 1.4E-33 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 PANTHER PTHR30419:SF10 6 303 7.8E-132 T 22-04-2016 LK04_RS08575 3f06e19fb884e73d2ed56e5e6fbfdded 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 8.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 Gene3D G3DSA:3.30.420.40 5 256 3.5E-105 T 22-04-2016 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 255 2.4E-90 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 PIRSF PIRSF000538 6 503 4.7E-180 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 PANTHER PTHR10196 1 503 3.2E-265 T 22-04-2016 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 PANTHER PTHR10196:SF9 1 503 3.2E-265 T 22-04-2016 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 Gene3D G3DSA:3.30.420.40 258 500 4.1E-105 T 22-04-2016 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 138 150 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 7 499 1.6E-228 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 Hamap MF_00186 Glycerol kinase [glpK]. 6 500 59.224 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 SUPERFAMILY SSF53067 7 258 7.3E-96 T 22-04-2016 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 453 3.5E-62 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LK04_RS19580 e1bbe3d9d1e8a21cdac69cc6a35bfa2b 503 SUPERFAMILY SSF53067 258 499 1.31E-86 T 22-04-2016 LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 SMART SM00861 593 786 1.1E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 PANTHER PTHR23152:SF4 1 934 0.0 T 22-04-2016 LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 932 8.0E-55 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 SUPERFAMILY SSF52518 576 793 7.95E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 PIRSF PIRSF000157 1 934 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 SUPERFAMILY SSF52518 120 544 1.59E-87 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 Gene3D G3DSA:3.40.50.970 594 790 2.8E-25 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 932 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 Pfam PF00676 Dehydrogenase E1 component 220 514 3.6E-48 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 5.4E-16 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 Gene3D G3DSA:3.40.50.970 162 547 2.3E-77 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 5.2E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS13095 66fad9d14805d0d11f49efdfaf0daeb9 935 PANTHER PTHR23152 1 934 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 1.1E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 1.1E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 1.1E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 1.1E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 1.1E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 1.1E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 PANTHER PTHR22939:SF101 1 383 6.7E-200 T 22-04-2016 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 SUPERFAMILY SSF50156 226 351 6.44E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 Gene3D G3DSA:2.40.10.10 157 269 4.9E-44 T 22-04-2016 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 SMART SM00228 268 350 6.5E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 SMART SM00228 375 448 2.1E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 Pfam PF13365 Trypsin-like peptidase domain 93 229 2.0E-30 T 22-04-2016 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 SUPERFAMILY SSF50494 38 260 4.86E-66 T 22-04-2016 IPR009003 Peptidase S1, PA clan LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 Gene3D G3DSA:2.30.42.10 388 453 8.8E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 454 1.7E-159 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 PANTHER PTHR22939 1 383 6.7E-200 T 22-04-2016 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 SUPERFAMILY SSF50156 387 452 4.6E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 376 444 3.1E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 Gene3D G3DSA:2.30.42.10 270 364 2.4E-30 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 Gene3D G3DSA:2.40.10.10 38 156 8.8E-38 T 22-04-2016 LK04_RS16705 7f0b0f3796d626416ae71f1d36493f62 456 Pfam PF13180 PDZ domain 279 359 1.5E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS00435 d5f51b92dda3d295d8c531f06bd010b4 236 PANTHER PTHR24220:SF150 8 222 6.2E-92 T 22-04-2016 LK04_RS00435 d5f51b92dda3d295d8c531f06bd010b4 236 SMART SM00382 31 218 1.3E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS00435 d5f51b92dda3d295d8c531f06bd010b4 236 PANTHER PTHR24220 8 222 6.2E-92 T 22-04-2016 LK04_RS00435 d5f51b92dda3d295d8c531f06bd010b4 236 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS00435 d5f51b92dda3d295d8c531f06bd010b4 236 SUPERFAMILY SSF52540 7 224 2.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00435 d5f51b92dda3d295d8c531f06bd010b4 236 Gene3D G3DSA:3.40.50.300 7 221 3.1E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00435 d5f51b92dda3d295d8c531f06bd010b4 236 Pfam PF00005 ABC transporter 22 168 2.5E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 SUPERFAMILY SSF55073 249 405 2.59E-23 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 Pfam PF00672 HAMP domain 164 232 7.7E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 SUPERFAMILY SSF141868 418 663 3.53E-73 T 22-04-2016 IPR001633 EAL domain LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 Gene3D G3DSA:3.20.20.450 418 661 6.9E-78 T 22-04-2016 IPR001633 EAL domain LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 Gene3D G3DSA:3.30.70.270 247 411 4.9E-24 T 22-04-2016 LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 37 156 1.6E-54 T 22-04-2016 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 401 2.2E-11 T 22-04-2016 IPR000160 GGDEF domain LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 Pfam PF00563 EAL domain 420 652 1.0E-60 T 22-04-2016 IPR001633 EAL domain LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 PANTHER PTHR33121 367 661 4.9E-48 T 22-04-2016 LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 PANTHER PTHR33121:SF13 367 661 4.9E-48 T 22-04-2016 LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 399 4.2E-19 T 22-04-2016 IPR000160 GGDEF domain LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 SMART SM00052 413 658 4.3E-91 T 22-04-2016 IPR001633 EAL domain LK04_RS18250 8cabd5bcc91ee8b5f013ff1e8cefc73e 671 SMART SM00267 232 403 4.9E-25 T 22-04-2016 IPR000160 GGDEF domain LK04_RS16955 36418c843a5603aa826939b1a342a077 302 Gene3D G3DSA:1.10.10.10 11 91 2.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16955 36418c843a5603aa826939b1a342a077 302 Pfam PF03466 LysR substrate binding domain 98 301 1.3E-38 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS16955 36418c843a5603aa826939b1a342a077 302 SUPERFAMILY SSF46785 5 119 3.96E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16955 36418c843a5603aa826939b1a342a077 302 SUPERFAMILY SSF53850 98 301 2.79E-40 T 22-04-2016 LK04_RS16955 36418c843a5603aa826939b1a342a077 302 Gene3D G3DSA:3.40.190.10 185 269 2.4E-18 T 22-04-2016 LK04_RS16955 36418c843a5603aa826939b1a342a077 302 PANTHER PTHR30537 4 301 3.5E-99 T 22-04-2016 LK04_RS16955 36418c843a5603aa826939b1a342a077 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 2.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16955 36418c843a5603aa826939b1a342a077 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 2.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16955 36418c843a5603aa826939b1a342a077 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 2.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16955 36418c843a5603aa826939b1a342a077 302 Gene3D G3DSA:3.40.190.10 100 184 9.3E-21 T 22-04-2016 LK04_RS16955 36418c843a5603aa826939b1a342a077 302 PANTHER PTHR30537:SF5 4 301 3.5E-99 T 22-04-2016 LK04_RS16955 36418c843a5603aa826939b1a342a077 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 4.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS04830 1e7fa7c04edbc424ca7fe21eef26cd7a 342 SUPERFAMILY SSF111369 182 263 1.12E-15 T 22-04-2016 LK04_RS04830 1e7fa7c04edbc424ca7fe21eef26cd7a 342 Gene3D G3DSA:2.40.50.100 210 243 2.6E-21 T 22-04-2016 LK04_RS04830 1e7fa7c04edbc424ca7fe21eef26cd7a 342 Gene3D G3DSA:2.40.50.100 49 79 2.6E-21 T 22-04-2016 LK04_RS04830 1e7fa7c04edbc424ca7fe21eef26cd7a 342 PANTHER PTHR30386:SF7 8 342 9.4E-98 T 22-04-2016 LK04_RS04830 1e7fa7c04edbc424ca7fe21eef26cd7a 342 PANTHER PTHR30386 8 342 9.4E-98 T 22-04-2016 LK04_RS04830 1e7fa7c04edbc424ca7fe21eef26cd7a 342 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 289 7.2E-19 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS04830 1e7fa7c04edbc424ca7fe21eef26cd7a 342 Pfam PF00529 HlyD membrane-fusion protein of T1SS 53 335 5.7E-8 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS04830 1e7fa7c04edbc424ca7fe21eef26cd7a 342 SUPERFAMILY SSF111369 48 130 1.57E-11 T 22-04-2016 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 Gene3D G3DSA:3.30.1360.10 9 57 1.5E-10 T 22-04-2016 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 Gene3D G3DSA:2.170.120.12 58 177 5.5E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 Gene3D G3DSA:1.10.150.20 244 328 6.1E-38 T 22-04-2016 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 1.1E-112 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 5.0E-24 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 SMART SM00662 23 234 6.6E-106 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 PANTHER PTHR32108 1 329 1.2E-159 T 22-04-2016 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.6E-23 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.0E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 PANTHER PTHR32108:SF0 1 329 1.2E-159 T 22-04-2016 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 SUPERFAMILY SSF56553 53 178 2.09E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 SUPERFAMILY SSF55257 179 233 3.53E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 SUPERFAMILY SSF55257 7 53 3.53E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 22-04-2016 LK04_RS00995 9ef02a12f66eb5bbd22ace09ff41ae6e 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.577 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 44 256 7.4E-13 T 22-04-2016 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 Gene3D G3DSA:3.50.50.60 42 232 1.7E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 Gene3D G3DSA:3.50.50.60 233 350 9.0E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 SUPERFAMILY SSF51905 42 91 4.48E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 SUPERFAMILY SSF51905 131 431 4.48E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 PANTHER PTHR23023 39 105 2.2E-82 T 22-04-2016 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 PANTHER PTHR23023 122 379 2.2E-82 T 22-04-2016 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 189 1.6E-7 T 22-04-2016 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 222 247 1.6E-7 T 22-04-2016 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 64 1.6E-7 T 22-04-2016 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 PANTHER PTHR23023:SF119 39 105 2.2E-82 T 22-04-2016 LK04_RS02445 b1c6b0bbf1c4a8ca07c2ddc57a1b8456 484 PANTHER PTHR23023:SF119 122 379 2.2E-82 T 22-04-2016 LK04_RS00720 dca701a89aefce4b2c31be1d36c3568e 691 Pfam PF13515 Fusaric acid resistance protein-like 379 499 7.3E-18 T 22-04-2016 LK04_RS00720 dca701a89aefce4b2c31be1d36c3568e 691 PANTHER PTHR30509 1 684 0.0 T 22-04-2016 LK04_RS00720 dca701a89aefce4b2c31be1d36c3568e 691 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 671 1.8E-204 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK LK04_RS00720 dca701a89aefce4b2c31be1d36c3568e 691 Pfam PF12805 FUSC-like inner membrane protein yccS 63 330 1.8E-72 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal LK04_RS00720 dca701a89aefce4b2c31be1d36c3568e 691 PANTHER PTHR30509:SF4 1 684 0.0 T 22-04-2016 LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 Gene3D G3DSA:1.10.10.10 1 81 7.8E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.0E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 SUPERFAMILY SSF53850 89 294 2.17E-33 T 22-04-2016 LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 Pfam PF03466 LysR substrate binding domain 87 288 2.3E-34 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 PANTHER PTHR30293:SF0 1 305 4.2E-133 T 22-04-2016 LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 PANTHER PTHR30293 1 305 4.2E-133 T 22-04-2016 LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 Gene3D G3DSA:3.40.190.10 89 191 2.4E-22 T 22-04-2016 LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 Gene3D G3DSA:3.40.190.10 192 247 4.1E-14 T 22-04-2016 LK04_RS06530 92ab851be7af54f1769c876ec31828dc 305 SUPERFAMILY SSF46785 1 84 2.33E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00390 4488a1c3641bb1971cd9b9047272d73c 501 SUPERFAMILY SSF103661 466 498 5.62E-12 T 22-04-2016 LK04_RS00390 4488a1c3641bb1971cd9b9047272d73c 501 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 433 7.4E-144 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 LK04_RS00390 4488a1c3641bb1971cd9b9047272d73c 501 Gene3D G3DSA:1.20.1250.20 253 445 3.2E-29 T 22-04-2016 LK04_RS00390 4488a1c3641bb1971cd9b9047272d73c 501 Gene3D G3DSA:1.20.1250.20 25 231 9.1E-23 T 22-04-2016 LK04_RS00390 4488a1c3641bb1971cd9b9047272d73c 501 Pfam PF08946 Osmosensory transporter coiled coil 455 500 5.2E-22 T 22-04-2016 IPR015041 Osmosensory transporter coiled coil LK04_RS00390 4488a1c3641bb1971cd9b9047272d73c 501 Pfam PF00083 Sugar (and other) transporter 29 448 8.7E-70 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS00390 4488a1c3641bb1971cd9b9047272d73c 501 PANTHER PTHR23508:SF17 4 463 1.0E-273 T 22-04-2016 LK04_RS00390 4488a1c3641bb1971cd9b9047272d73c 501 PANTHER PTHR23508 4 463 1.0E-273 T 22-04-2016 LK04_RS00390 4488a1c3641bb1971cd9b9047272d73c 501 ProSitePatterns PS00216 Sugar transport proteins signature 1. 316 333 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS00390 4488a1c3641bb1971cd9b9047272d73c 501 SUPERFAMILY SSF103473 25 447 9.02E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS06140 e35deedba105cd971f5530d5f324f3ab 310 SUPERFAMILY SSF53448 9 224 6.12E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06140 e35deedba105cd971f5530d5f324f3ab 310 PANTHER PTHR22916:SF23 1 219 2.6E-31 T 22-04-2016 LK04_RS06140 e35deedba105cd971f5530d5f324f3ab 310 Gene3D G3DSA:3.90.550.10 9 228 3.8E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06140 e35deedba105cd971f5530d5f324f3ab 310 Pfam PF00535 Glycosyl transferase family 2 10 115 5.2E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS06140 e35deedba105cd971f5530d5f324f3ab 310 PANTHER PTHR22916 1 219 2.6E-31 T 22-04-2016 LK04_RS10585 da277e26f22c023abf0e1b869ab1b8e3 352 Gene3D G3DSA:3.40.50.1820 21 173 7.4E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS10585 da277e26f22c023abf0e1b869ab1b8e3 352 Gene3D G3DSA:3.40.50.1820 216 335 7.4E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS10585 da277e26f22c023abf0e1b869ab1b8e3 352 PANTHER PTHR10272 65 170 1.6E-14 T 22-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 LK04_RS10585 da277e26f22c023abf0e1b869ab1b8e3 352 PANTHER PTHR10272 213 289 1.6E-14 T 22-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 LK04_RS10585 da277e26f22c023abf0e1b869ab1b8e3 352 SUPERFAMILY SSF53474 8 173 1.79E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS10585 da277e26f22c023abf0e1b869ab1b8e3 352 SUPERFAMILY SSF53474 216 304 1.79E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS10585 da277e26f22c023abf0e1b869ab1b8e3 352 PIRSF PIRSF031982 2 344 1.3E-87 T 22-04-2016 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL LK04_RS10585 da277e26f22c023abf0e1b869ab1b8e3 352 Pfam PF12146 Serine aminopeptidase, S33 74 172 4.9E-8 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 LK04_RS08115 7aae77c5285c5493320e6c11111041a6 302 Gene3D G3DSA:1.10.3720.10 102 299 9.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08115 7aae77c5285c5493320e6c11111041a6 302 PANTHER PTHR30465 17 302 2.9E-139 T 22-04-2016 LK04_RS08115 7aae77c5285c5493320e6c11111041a6 302 SUPERFAMILY SSF161098 100 283 1.15E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08115 7aae77c5285c5493320e6c11111041a6 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 9.2E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08115 7aae77c5285c5493320e6c11111041a6 302 PANTHER PTHR30465:SF9 17 302 2.9E-139 T 22-04-2016 LK04_RS08115 7aae77c5285c5493320e6c11111041a6 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 3.2E-13 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS04760 19b25f8357ef55a253d1724417b1bc0d 196 SUPERFAMILY SSF51182 7 194 4.26E-53 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS04760 19b25f8357ef55a253d1724417b1bc0d 196 Gene3D G3DSA:2.60.120.10 46 181 3.2E-40 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS04760 19b25f8357ef55a253d1724417b1bc0d 196 PANTHER PTHR12918 44 196 1.8E-16 T 22-04-2016 LK04_RS04760 19b25f8357ef55a253d1724417b1bc0d 196 Gene3D G3DSA:1.20.5.440 4 44 4.9E-16 T 22-04-2016 LK04_RS04760 19b25f8357ef55a253d1724417b1bc0d 196 Pfam PF05995 Cysteine dioxygenase type I 45 158 1.1E-5 T 22-04-2016 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|UniPathway: UPA00012 LK04_RS03125 571f0cf21bf21efc25ffa04c36335388 576 Gene3D G3DSA:3.90.1310.10 142 239 9.8E-21 T 22-04-2016 LK04_RS03125 571f0cf21bf21efc25ffa04c36335388 576 PANTHER PTHR30627 6 567 5.6E-175 T 22-04-2016 LK04_RS03125 571f0cf21bf21efc25ffa04c36335388 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 217 2.3E-13 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LK04_RS03125 571f0cf21bf21efc25ffa04c36335388 576 SUPERFAMILY SSF56601 233 567 3.07E-80 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS03125 571f0cf21bf21efc25ffa04c36335388 576 SUPERFAMILY SSF56519 60 232 4.19E-35 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LK04_RS03125 571f0cf21bf21efc25ffa04c36335388 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 258 553 2.2E-71 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LK04_RS03125 571f0cf21bf21efc25ffa04c36335388 576 Gene3D G3DSA:3.40.710.10 240 560 1.5E-76 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS03125 571f0cf21bf21efc25ffa04c36335388 576 PANTHER PTHR30627:SF1 6 567 5.6E-175 T 22-04-2016 LK04_RS12205 1aa5b286db5e299b84dd205dd8136bc2 274 SMART SM00644 29 175 1.2E-32 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LK04_RS12205 1aa5b286db5e299b84dd205dd8136bc2 274 SUPERFAMILY SSF55846 22 191 5.63E-55 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LK04_RS12205 1aa5b286db5e299b84dd205dd8136bc2 274 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 40 176 8.4E-22 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LK04_RS12205 1aa5b286db5e299b84dd205dd8136bc2 274 PANTHER PTHR30417 40 271 3.1E-75 T 22-04-2016 LK04_RS12205 1aa5b286db5e299b84dd205dd8136bc2 274 SUPERFAMILY SSF47090 196 270 4.94E-17 T 22-04-2016 IPR002477 Peptidoglycan binding-like LK04_RS12205 1aa5b286db5e299b84dd205dd8136bc2 274 Gene3D G3DSA:3.40.80.10 33 194 5.3E-57 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LK04_RS01220 82101308e17bf87077c76d9551b94b42 305 SUPERFAMILY SSF46785 4 108 2.73E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01220 82101308e17bf87077c76d9551b94b42 305 Gene3D G3DSA:3.40.190.10 92 171 4.8E-8 T 22-04-2016 LK04_RS01220 82101308e17bf87077c76d9551b94b42 305 Pfam PF03466 LysR substrate binding domain 90 292 7.1E-37 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS01220 82101308e17bf87077c76d9551b94b42 305 Gene3D G3DSA:1.10.10.10 4 87 1.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01220 82101308e17bf87077c76d9551b94b42 305 SUPERFAMILY SSF53850 91 296 3.72E-39 T 22-04-2016 LK04_RS01220 82101308e17bf87077c76d9551b94b42 305 PANTHER PTHR30126:SF26 1 305 1.1E-151 T 22-04-2016 LK04_RS01220 82101308e17bf87077c76d9551b94b42 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS01220 82101308e17bf87077c76d9551b94b42 305 PANTHER PTHR30126 1 305 1.1E-151 T 22-04-2016 LK04_RS01220 82101308e17bf87077c76d9551b94b42 305 Gene3D G3DSA:3.40.190.10 172 259 5.4E-15 T 22-04-2016 LK04_RS15475 a31024f67cf73216d18f959e3453e276 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 50.469 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 LK04_RS15475 a31024f67cf73216d18f959e3453e276 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 354 1.6E-135 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS15475 a31024f67cf73216d18f959e3453e276 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LK04_RS15475 a31024f67cf73216d18f959e3453e276 363 Gene3D G3DSA:3.40.718.10 2 355 3.9E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS15475 a31024f67cf73216d18f959e3453e276 363 PANTHER PTHR11835 1 361 2.2E-200 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LK04_RS15475 a31024f67cf73216d18f959e3453e276 363 PANTHER PTHR11835:SF35 1 361 2.2E-200 T 22-04-2016 LK04_RS15475 a31024f67cf73216d18f959e3453e276 363 SMART SM01329 6 355 1.1E-199 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS15475 a31024f67cf73216d18f959e3453e276 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 353 1.2E-164 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 LK04_RS15475 a31024f67cf73216d18f959e3453e276 363 SUPERFAMILY SSF53659 3 358 6.3E-122 T 22-04-2016 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 TIGRFAM TIGR00838 argH: argininosuccinate lyase 8 458 1.1E-154 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PRINTS PR00149 Fumarate lyase superfamily signature 107 125 4.8E-23 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PRINTS PR00149 Fumarate lyase superfamily signature 152 170 4.8E-23 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PRINTS PR00149 Fumarate lyase superfamily signature 236 263 4.8E-23 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 4.8E-23 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 Pfam PF14698 Argininosuccinate lyase C-terminal 368 435 1.4E-22 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PRINTS PR00145 Argininosuccinate lyase family signature 315 334 2.7E-49 T 22-04-2016 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PRINTS PR00145 Argininosuccinate lyase family signature 198 214 2.7E-49 T 22-04-2016 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PRINTS PR00145 Argininosuccinate lyase family signature 147 167 2.7E-49 T 22-04-2016 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PRINTS PR00145 Argininosuccinate lyase family signature 236 260 2.7E-49 T 22-04-2016 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PRINTS PR00145 Argininosuccinate lyase family signature 106 128 2.7E-49 T 22-04-2016 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PRINTS PR00145 Argininosuccinate lyase family signature 280 296 2.7E-49 T 22-04-2016 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 Gene3D G3DSA:1.20.200.10 232 379 4.1E-77 T 22-04-2016 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 Gene3D G3DSA:1.20.200.10 125 187 4.1E-77 T 22-04-2016 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 Gene3D G3DSA:1.10.40.30 380 435 5.4E-27 T 22-04-2016 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PANTHER PTHR11444:SF3 1 460 3.2E-175 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 PANTHER PTHR11444 1 460 3.2E-175 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 SUPERFAMILY SSF48557 26 462 7.85E-122 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 Hamap MF_00006 Argininosuccinate lyase [argH]. 7 458 37.141 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 Gene3D G3DSA:1.10.275.10 197 231 3.6E-39 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 Gene3D G3DSA:1.10.275.10 33 124 3.6E-39 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LK04_RS12625 afb8454d443c3394a2d76046347ad89c 475 Pfam PF00206 Lyase 29 305 1.3E-54 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal LK04_RS19275 e1c5caa29280ad4827220ff869d7319b 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 7.6E-30 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS19275 e1c5caa29280ad4827220ff869d7319b 91 Gene3D G3DSA:3.90.940.10 1 78 8.9E-16 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS19275 e1c5caa29280ad4827220ff869d7319b 91 Pfam PF01192 RNA polymerase Rpb6 10 60 7.4E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS19275 e1c5caa29280ad4827220ff869d7319b 91 SMART SM01409 8 61 4.0E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS19275 e1c5caa29280ad4827220ff869d7319b 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.478 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS19275 e1c5caa29280ad4827220ff869d7319b 91 SUPERFAMILY SSF63562 2 80 7.15E-25 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LK04_RS19275 e1c5caa29280ad4827220ff869d7319b 91 PANTHER PTHR34476 2 91 1.8E-32 T 22-04-2016 LK04_RS17375 e51b28e3b44c1e05fc88cd6e8b7d43d3 353 PANTHER PTHR30006:SF10 1 353 3.7E-95 T 22-04-2016 LK04_RS17375 e51b28e3b44c1e05fc88cd6e8b7d43d3 353 Gene3D G3DSA:3.40.190.10 1 134 2.1E-24 T 22-04-2016 LK04_RS17375 e51b28e3b44c1e05fc88cd6e8b7d43d3 353 Gene3D G3DSA:3.40.190.10 275 325 2.1E-24 T 22-04-2016 LK04_RS17375 e51b28e3b44c1e05fc88cd6e8b7d43d3 353 SUPERFAMILY SSF53850 38 344 3.91E-45 T 22-04-2016 LK04_RS17375 e51b28e3b44c1e05fc88cd6e8b7d43d3 353 Pfam PF13343 Bacterial extracellular solute-binding protein 87 334 1.9E-49 T 22-04-2016 LK04_RS17375 e51b28e3b44c1e05fc88cd6e8b7d43d3 353 PANTHER PTHR30006 1 353 3.7E-95 T 22-04-2016 LK04_RS17375 e51b28e3b44c1e05fc88cd6e8b7d43d3 353 Gene3D G3DSA:3.40.190.10 139 274 2.3E-21 T 22-04-2016 LK04_RS07310 c02290db692a3cb83f5279db331590d5 262 SUPERFAMILY SSF52540 4 232 1.45E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07310 c02290db692a3cb83f5279db331590d5 262 PANTHER PTHR24220:SF361 6 258 2.6E-111 T 22-04-2016 LK04_RS07310 c02290db692a3cb83f5279db331590d5 262 SMART SM00382 33 216 1.8E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS07310 c02290db692a3cb83f5279db331590d5 262 Gene3D G3DSA:3.40.50.300 3 222 3.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07310 c02290db692a3cb83f5279db331590d5 262 Pfam PF00005 ABC transporter 24 166 9.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS07310 c02290db692a3cb83f5279db331590d5 262 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 4.4E-103 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 LK04_RS07310 c02290db692a3cb83f5279db331590d5 262 PANTHER PTHR24220 6 258 2.6E-111 T 22-04-2016 LK04_RS07310 c02290db692a3cb83f5279db331590d5 262 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS11760 57f33a102270ea34f7694a66c31c60a6 304 SUPERFAMILY SSF103481 190 287 1.44E-10 T 22-04-2016 LK04_RS11760 57f33a102270ea34f7694a66c31c60a6 304 SUPERFAMILY SSF103481 48 147 2.22E-14 T 22-04-2016 LK04_RS11760 57f33a102270ea34f7694a66c31c60a6 304 Pfam PF00892 EamA-like transporter family 17 143 1.6E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS11760 57f33a102270ea34f7694a66c31c60a6 304 Pfam PF00892 EamA-like transporter family 156 285 1.4E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS11760 57f33a102270ea34f7694a66c31c60a6 304 PANTHER PTHR12715 17 303 6.2E-46 T 22-04-2016 LK04_RS13380 49bdad612bf69a9d379becb9fbf8ce63 634 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 610 3.8E-83 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LK04_RS13380 49bdad612bf69a9d379becb9fbf8ce63 634 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 240 2.0E-45 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LK04_RS13380 49bdad612bf69a9d379becb9fbf8ce63 634 Gene3D G3DSA:3.90.1310.10 131 253 3.1E-39 T 22-04-2016 LK04_RS13380 49bdad612bf69a9d379becb9fbf8ce63 634 Gene3D G3DSA:3.40.710.10 254 613 3.8E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS13380 49bdad612bf69a9d379becb9fbf8ce63 634 PANTHER PTHR30627:SF2 6 629 1.0E-270 T 22-04-2016 LK04_RS13380 49bdad612bf69a9d379becb9fbf8ce63 634 SUPERFAMILY SSF56601 256 610 1.71E-90 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS13380 49bdad612bf69a9d379becb9fbf8ce63 634 PANTHER PTHR30627 6 629 1.0E-270 T 22-04-2016 LK04_RS13380 49bdad612bf69a9d379becb9fbf8ce63 634 SUPERFAMILY SSF56519 57 254 2.35E-50 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LK04_RS13380 49bdad612bf69a9d379becb9fbf8ce63 634 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 613 4.3E-236 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 Pfam PF01743 Poly A polymerase head domain 34 166 1.7E-40 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 Pfam PF12626 Polymerase A arginine-rich C-terminus 311 430 2.0E-40 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 Gene3D G3DSA:1.10.3090.10 166 402 1.3E-49 T 22-04-2016 LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 3 432 3.0E-154 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 Gene3D G3DSA:3.30.460.10 16 165 1.0E-50 T 22-04-2016 LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 PANTHER PTHR13734 1 303 2.1E-132 T 22-04-2016 LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 PANTHER PTHR13734:SF47 1 303 2.1E-132 T 22-04-2016 LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 2 435 37.646 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 SUPERFAMILY SSF81301 6 162 2.51E-40 T 22-04-2016 LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 194 253 2.6E-19 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LK04_RS15110 d3c25505dbe0b5ef2866ae676da0e57b 442 SUPERFAMILY SSF81891 164 400 3.53E-47 T 22-04-2016 LK04_RS02030 848b24b0290c9d3ba654ed93d82fb162 102 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 83 3.3E-17 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain LK04_RS02030 848b24b0290c9d3ba654ed93d82fb162 102 SUPERFAMILY SSF54909 1 96 1.32E-28 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS02030 848b24b0290c9d3ba654ed93d82fb162 102 PANTHER PTHR33336 1 101 9.9E-17 T 22-04-2016 LK04_RS02030 848b24b0290c9d3ba654ed93d82fb162 102 Gene3D G3DSA:3.30.70.900 1 101 1.7E-34 T 22-04-2016 LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 SUPERFAMILY SSF53850 90 295 1.5E-39 T 22-04-2016 LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 Gene3D G3DSA:1.10.10.10 1 86 7.9E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 PANTHER PTHR30419:SF8 1 291 1.6E-122 T 22-04-2016 LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 Gene3D G3DSA:3.40.190.10 176 261 4.5E-23 T 22-04-2016 LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 Pfam PF03466 LysR substrate binding domain 89 291 1.0E-42 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 PANTHER PTHR30419 1 291 1.6E-122 T 22-04-2016 LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 Gene3D G3DSA:3.40.190.10 90 175 3.0E-13 T 22-04-2016 LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.4E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17200 b9fca67c8ee0bf6d13029648f978f61e 300 SUPERFAMILY SSF46785 1 86 4.87E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 PANTHER PTHR26402 4 214 4.8E-150 T 22-04-2016 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 SUPERFAMILY SSF46894 145 206 6.8E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 PANTHER PTHR26402:SF510 4 214 4.8E-150 T 22-04-2016 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 SMART SM00421 148 205 9.4E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 7.8E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 7.8E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 7.8E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 Gene3D G3DSA:1.10.10.10 126 205 6.5E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 Gene3D G3DSA:3.40.50.2300 2 125 6.6E-22 T 22-04-2016 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 SUPERFAMILY SSF52172 3 136 7.97E-22 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.4E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 Pfam PF00072 Response regulator receiver domain 6 120 9.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 SMART SM00448 4 120 5.9E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS05615 4fb000f1330796c7255b730555654cbc 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.141 T 22-04-2016 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 LK04_RS00190 71c6ff2a022bccda5491323bf36ccd27 387 TIGRFAM TIGR00277 HDIG: HDIG domain 144 235 2.3E-9 T 22-04-2016 IPR006675 HDIG domain LK04_RS00190 71c6ff2a022bccda5491323bf36ccd27 387 SUPERFAMILY SSF109604 137 301 1.67E-32 T 22-04-2016 LK04_RS00190 71c6ff2a022bccda5491323bf36ccd27 387 Pfam PF11871 Domain of unknown function (DUF3391) 2 110 3.4E-22 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 LK04_RS00190 71c6ff2a022bccda5491323bf36ccd27 387 Pfam PF13487 HD domain 195 256 7.2E-19 T 22-04-2016 LK04_RS00190 71c6ff2a022bccda5491323bf36ccd27 387 Gene3D G3DSA:1.10.3210.10 135 304 8.3E-25 T 22-04-2016 IPR006674 HD domain LK04_RS00190 71c6ff2a022bccda5491323bf36ccd27 387 SMART SM00471 140 275 6.4E-8 T 22-04-2016 IPR003607 HD/PDEase domain LK04_RS04335 7ac8992d30bb82ae06e23121d99eef1a 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.202 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 LK04_RS04335 7ac8992d30bb82ae06e23121d99eef1a 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.8E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS04335 7ac8992d30bb82ae06e23121d99eef1a 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.2E-89 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 LK04_RS04335 7ac8992d30bb82ae06e23121d99eef1a 208 Gene3D G3DSA:3.40.50.2020 2 208 8.5E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS04335 7ac8992d30bb82ae06e23121d99eef1a 208 PANTHER PTHR10285 1 197 3.0E-102 T 22-04-2016 LK04_RS04335 7ac8992d30bb82ae06e23121d99eef1a 208 SUPERFAMILY SSF53271 4 206 4.46E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS01565 cd689c8fbab20376efc110415a9b272c 373 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 367 7.2E-176 T 22-04-2016 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 LK04_RS01565 cd689c8fbab20376efc110415a9b272c 373 PANTHER PTHR32328:SF1 1 85 1.9E-186 T 22-04-2016 LK04_RS01565 cd689c8fbab20376efc110415a9b272c 373 PANTHER PTHR32328:SF1 103 372 1.9E-186 T 22-04-2016 LK04_RS01565 cd689c8fbab20376efc110415a9b272c 373 Pfam PF03841 L-seryl-tRNA selenium transferase 96 266 1.8E-11 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 LK04_RS01565 cd689c8fbab20376efc110415a9b272c 373 Gene3D G3DSA:3.40.640.10 31 243 1.4E-25 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS01565 cd689c8fbab20376efc110415a9b272c 373 PANTHER PTHR32328 1 85 1.9E-186 T 22-04-2016 LK04_RS01565 cd689c8fbab20376efc110415a9b272c 373 PANTHER PTHR32328 103 372 1.9E-186 T 22-04-2016 LK04_RS01565 cd689c8fbab20376efc110415a9b272c 373 SUPERFAMILY SSF53383 8 349 2.55E-29 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS06375 d84020b54d90f28e6976cde638c9f1d0 442 Pfam PF07690 Major Facilitator Superfamily 256 433 1.7E-8 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS06375 d84020b54d90f28e6976cde638c9f1d0 442 SUPERFAMILY SSF103473 14 441 2.09E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS06375 d84020b54d90f28e6976cde638c9f1d0 442 Gene3D G3DSA:1.20.1250.20 250 437 7.8E-18 T 22-04-2016 LK04_RS06375 d84020b54d90f28e6976cde638c9f1d0 442 Gene3D G3DSA:1.20.1250.20 27 231 6.5E-24 T 22-04-2016 LK04_RS06375 d84020b54d90f28e6976cde638c9f1d0 442 PANTHER PTHR23508:SF1 2 438 2.5E-143 T 22-04-2016 LK04_RS06375 d84020b54d90f28e6976cde638c9f1d0 442 Pfam PF00083 Sugar (and other) transporter 28 229 7.0E-21 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS06375 d84020b54d90f28e6976cde638c9f1d0 442 PANTHER PTHR23508 2 438 2.5E-143 T 22-04-2016 LK04_RS06375 d84020b54d90f28e6976cde638c9f1d0 442 ProSitePatterns PS00217 Sugar transport proteins signature 2. 138 163 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 SUPERFAMILY SSF46785 23 95 3.67E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 PANTHER PTHR30290:SF30 22 81 4.2E-181 T 22-04-2016 LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 PANTHER PTHR30290:SF30 119 553 4.2E-181 T 22-04-2016 LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 PANTHER PTHR30290 22 81 4.2E-181 T 22-04-2016 LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 PANTHER PTHR30290 119 553 4.2E-181 T 22-04-2016 LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 1.9E-42 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 SUPERFAMILY SSF53850 116 550 4.89E-61 T 22-04-2016 LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 Gene3D G3DSA:1.10.10.10 21 97 9.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 Gene3D G3DSA:3.90.76.10 140 267 1.9E-23 T 22-04-2016 LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 Gene3D G3DSA:3.40.190.10 268 308 5.4E-6 T 22-04-2016 LK04_RS15495 d5ab86b686eb6c8c7180db1ed645cf8e 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 163 307 5.0E-18 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 SUPERFAMILY SSF52413 309 435 5.1E-39 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 Gene3D G3DSA:1.20.5.100 207 233 2.3E-18 T 22-04-2016 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 PIRSF PIRSF500134 1 442 3.1E-191 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 3.0E-29 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 SUPERFAMILY SSF51735 1 195 1.06E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 7.5E-64 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 PIRSF PIRSF000124 1 439 4.9E-149 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 Gene3D G3DSA:3.40.50.720 1 206 1.0E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 1.4E-39 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 PANTHER PTHR11374 1 444 1.1E-255 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 SUPERFAMILY SSF48179 203 300 7.71E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 PANTHER PTHR11374:SF18 1 444 1.1E-255 T 22-04-2016 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 Gene3D G3DSA:3.40.50.720 235 443 8.0E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 2.5E-139 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 LK04_RS08070 ec9a65d75c0aab50d8b1d44c9c707fb6 447 SMART SM00984 320 424 1.9E-50 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 LK04_RS13145 57eaf165b0a6d79b4b6b25a212a23a8a 245 PANTHER PTHR30292:SF0 1 245 4.7E-117 T 22-04-2016 LK04_RS13145 57eaf165b0a6d79b4b6b25a212a23a8a 245 Pfam PF03746 LamB/YcsF family 3 235 1.4E-91 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF LK04_RS13145 57eaf165b0a6d79b4b6b25a212a23a8a 245 SUPERFAMILY SSF88713 1 243 3.48E-89 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LK04_RS13145 57eaf165b0a6d79b4b6b25a212a23a8a 245 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 40.993 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF LK04_RS13145 57eaf165b0a6d79b4b6b25a212a23a8a 245 PANTHER PTHR30292 1 245 4.7E-117 T 22-04-2016 LK04_RS12715 1906a7c3a418436a156df19b9ad87f70 287 PANTHER PTHR36151 1 286 5.2E-81 T 22-04-2016 LK04_RS12715 1906a7c3a418436a156df19b9ad87f70 287 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 41 258 3.0E-51 T 22-04-2016 IPR018713 Domain of unknown function DUF2236 LK04_RS12715 1906a7c3a418436a156df19b9ad87f70 287 PANTHER PTHR36151:SF3 1 286 5.2E-81 T 22-04-2016 LK04_RS15440 09096853c37d9a5b863c556302a76e1f 106 Pfam PF04999 Cell division protein FtsL 11 104 2.9E-34 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LK04_RS15440 09096853c37d9a5b863c556302a76e1f 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.807 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LK04_RS15440 09096853c37d9a5b863c556302a76e1f 106 PANTHER PTHR37479:SF1 1 106 3.9E-41 T 22-04-2016 LK04_RS15440 09096853c37d9a5b863c556302a76e1f 106 PANTHER PTHR37479 1 106 3.9E-41 T 22-04-2016 LK04_RS15440 09096853c37d9a5b863c556302a76e1f 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 103 7.0E-29 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LK04_RS10790 a2118a4eab86abb135f7ae9967212fad 360 PANTHER PTHR30566 63 350 2.1E-71 T 22-04-2016 LK04_RS10790 a2118a4eab86abb135f7ae9967212fad 360 Gene3D G3DSA:2.30.30.60 201 250 5.0E-6 T 22-04-2016 LK04_RS10790 a2118a4eab86abb135f7ae9967212fad 360 SUPERFAMILY SSF50182 187 251 2.58E-13 T 22-04-2016 IPR010920 LSM domain LK04_RS10790 a2118a4eab86abb135f7ae9967212fad 360 Pfam PF00924 Mechanosensitive ion channel 143 337 6.4E-28 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LK04_RS10790 a2118a4eab86abb135f7ae9967212fad 360 PANTHER PTHR30566:SF10 63 350 2.1E-71 T 22-04-2016 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 SMART SM00642 247 596 2.3E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 Gene3D G3DSA:2.60.40.10 14 105 3.6E-19 T 22-04-2016 IPR013783 Immunoglobulin-like fold LK04_RS17580 eef992264280bf7278a6d73b17761134 728 Gene3D G3DSA:2.60.40.10 113 220 1.4E-37 T 22-04-2016 IPR013783 Immunoglobulin-like fold LK04_RS17580 eef992264280bf7278a6d73b17761134 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.288 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 SUPERFAMILY SSF81296 117 222 1.59E-32 T 22-04-2016 IPR014756 Immunoglobulin E-set LK04_RS17580 eef992264280bf7278a6d73b17761134 728 PANTHER PTHR10357:SF158 49 725 0.0 T 22-04-2016 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 Pfam PF00128 Alpha amylase, catalytic domain 273 343 3.0E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 SUPERFAMILY SSF51445 229 621 2.4E-111 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS17580 eef992264280bf7278a6d73b17761134 728 SUPERFAMILY SSF51011 624 726 9.47E-34 T 22-04-2016 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 129 207 7.0E-23 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 4.5E-23 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 Gene3D G3DSA:3.20.20.80 243 611 8.6E-92 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 SUPERFAMILY SSF81296 16 115 1.24E-16 T 22-04-2016 IPR014756 Immunoglobulin E-set LK04_RS17580 eef992264280bf7278a6d73b17761134 728 PANTHER PTHR10357 49 725 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LK04_RS17580 eef992264280bf7278a6d73b17761134 728 Gene3D G3DSA:2.60.40.1180 624 725 8.5E-37 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta LK04_RS17580 eef992264280bf7278a6d73b17761134 728 PIRSF PIRSF000463 6 727 4.9E-279 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 SUPERFAMILY SSF161098 476 678 1.83E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 SUPERFAMILY SSF161098 398 476 3.92E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 PANTHER PTHR30425 524 693 4.4E-130 T 22-04-2016 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 PANTHER PTHR30425 332 471 4.4E-130 T 22-04-2016 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 502 690 3.2E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 Gene3D G3DSA:2.130.10.10 172 346 2.4E-10 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 PANTHER PTHR30425:SF3 524 693 4.4E-130 T 22-04-2016 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 PANTHER PTHR30425:SF3 332 471 4.4E-130 T 22-04-2016 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 Gene3D G3DSA:1.10.3720.10 382 470 3.8E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 Gene3D G3DSA:1.10.3720.10 527 690 3.8E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 Gene3D G3DSA:1.10.3720.10 30 54 3.8E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04310 e8c9d89c47c6dc3472520fe091d03743 697 SUPERFAMILY SSF69322 142 360 9.81E-12 T 22-04-2016 LK04_RS14180 2c5bd7fe4b40c4ff03b5efbd5c527180 439 PANTHER PTHR30588:SF0 2 439 2.2E-226 T 22-04-2016 LK04_RS14180 2c5bd7fe4b40c4ff03b5efbd5c527180 439 Pfam PF05525 Branched-chain amino acid transport protein 7 429 5.2E-157 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LK04_RS14180 2c5bd7fe4b40c4ff03b5efbd5c527180 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.0E-157 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LK04_RS14180 2c5bd7fe4b40c4ff03b5efbd5c527180 439 PANTHER PTHR30588 2 439 2.2E-226 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LK04_RS12855 77f92c75ab5da8097e077fbaa601375f 328 Gene3D G3DSA:3.20.20.70 5 301 3.0E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS12855 77f92c75ab5da8097e077fbaa601375f 328 Pfam PF13353 4Fe-4S single cluster domain 22 124 2.1E-8 T 22-04-2016 LK04_RS12855 77f92c75ab5da8097e077fbaa601375f 328 Pfam PF06463 Molybdenum Cofactor Synthesis C 185 311 9.9E-38 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12855 77f92c75ab5da8097e077fbaa601375f 328 PANTHER PTHR22960 4 284 3.2E-131 T 22-04-2016 LK04_RS12855 77f92c75ab5da8097e077fbaa601375f 328 SUPERFAMILY SSF102114 5 277 1.31E-69 T 22-04-2016 LK04_RS12855 77f92c75ab5da8097e077fbaa601375f 328 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 4 328 37.322 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12855 77f92c75ab5da8097e077fbaa601375f 328 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12855 77f92c75ab5da8097e077fbaa601375f 328 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 328 3.8E-106 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 LK04_RS12855 77f92c75ab5da8097e077fbaa601375f 328 SMART SM00729 13 218 3.8E-7 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LK04_RS12855 77f92c75ab5da8097e077fbaa601375f 328 Pfam PF04055 Radical SAM superfamily 18 180 3.1E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS10195 7613fe39eddd6c033b6fae4425895678 109 SUPERFAMILY SSF141488 27 102 2.22E-22 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor LK04_RS10195 7613fe39eddd6c033b6fae4425895678 109 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 32 93 7.6E-17 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor LK04_RS13365 04a87dae57db88718ebcff30d5790c84 214 PANTHER PTHR12039 1 213 7.5E-57 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 LK04_RS13365 04a87dae57db88718ebcff30d5790c84 214 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 66 9.1E-13 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LK04_RS13365 04a87dae57db88718ebcff30d5790c84 214 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 212 1.6E-57 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 LK04_RS13365 04a87dae57db88718ebcff30d5790c84 214 Gene3D G3DSA:3.40.50.620 6 213 2.5E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS13365 04a87dae57db88718ebcff30d5790c84 214 SUPERFAMILY SSF52374 2 213 1.93E-58 T 22-04-2016 LK04_RS13365 04a87dae57db88718ebcff30d5790c84 214 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 213 31.037 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 LK04_RS13365 04a87dae57db88718ebcff30d5790c84 214 Pfam PF01467 Cytidylyltransferase-like 7 187 7.1E-34 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 SUPERFAMILY SSF51905 312 374 3.56E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 SUPERFAMILY SSF51905 3 260 3.56E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 480 4.9E-13 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 Gene3D G3DSA:3.50.50.60 3 262 3.8E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 Pfam PF01266 FAD dependent oxidoreductase 5 323 4.6E-45 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 SUPERFAMILY SSF54373 226 319 2.75E-7 T 22-04-2016 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 PANTHER PTHR11985 5 491 3.2E-197 T 22-04-2016 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 6.4E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 6.4E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 6.4E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 6.4E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 6.4E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS00490 6d6b5cee91076466ab7f0ca097176ce4 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 6.4E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS02705 fe6aed1df6b4649df7db5aff96ce0c6e 197 PANTHER PTHR11067 1 197 1.5E-86 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LK04_RS02705 fe6aed1df6b4649df7db5aff96ce0c6e 197 Gene3D G3DSA:3.90.950.10 1 196 1.5E-80 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LK04_RS02705 fe6aed1df6b4649df7db5aff96ce0c6e 197 PANTHER PTHR11067:SF9 1 197 1.5E-86 T 22-04-2016 LK04_RS02705 fe6aed1df6b4649df7db5aff96ce0c6e 197 SUPERFAMILY SSF52972 1 195 2.62E-72 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LK04_RS02705 fe6aed1df6b4649df7db5aff96ce0c6e 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 49.962 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LK04_RS02705 fe6aed1df6b4649df7db5aff96ce0c6e 197 Pfam PF01725 Ham1 family 4 192 6.2E-56 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LK04_RS02705 fe6aed1df6b4649df7db5aff96ce0c6e 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 4.0E-68 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 SUPERFAMILY SSF54197 179 345 1.41E-59 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 176 8.2E-69 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 PANTHER PTHR11943:SF2 3 347 2.5E-215 T 22-04-2016 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 346 2.7E-203 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 22-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 PANTHER PTHR11943 3 347 2.5E-215 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 PIRSF PIRSF000808 1 341 8.6E-127 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 SUPERFAMILY SSF54197 4 177 4.62E-71 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 Gene3D G3DSA:3.30.428.10 45 175 2.1E-56 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 Gene3D G3DSA:3.30.428.10 176 345 3.7E-80 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LK04_RS12940 f0bfa88532f6cffb871fc263f998d3a5 347 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 346 1.2E-70 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 PANTHER PTHR11544:SF52 1 73 5.7E-45 T 22-04-2016 LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 Gene3D G3DSA:2.40.50.140 1 64 8.4E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 PRINTS PR00050 Cold shock protein signature 40 58 2.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 PRINTS PR00050 Cold shock protein signature 4 19 2.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 PRINTS PR00050 Cold shock protein signature 25 34 2.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 SMART SM00357 3 67 7.2E-27 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 3.2E-40 T 22-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 PANTHER PTHR11544 1 73 5.7E-45 T 22-04-2016 LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 SUPERFAMILY SSF50249 1 65 2.57E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 1.5E-27 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS12180 97b7ea5ccc6c972eb53697e2ad02cc8d 73 PIRSF PIRSF002599 1 73 3.0E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 LK04_RS10615 b86e5b592c8b81c1b237e99fb8cab8c9 203 PIRSF PIRSF033535 3 203 2.2E-28 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein LK04_RS10615 b86e5b592c8b81c1b237e99fb8cab8c9 203 SUPERFAMILY SSF141318 40 197 1.14E-16 T 22-04-2016 LK04_RS10615 b86e5b592c8b81c1b237e99fb8cab8c9 203 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 11 200 1.3E-51 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein LK04_RS09875 0cf9844032c20200ea52d8ebd8251f06 163 Pfam PF00959 Phage lysozyme 46 152 1.4E-27 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 LK04_RS09875 0cf9844032c20200ea52d8ebd8251f06 163 SUPERFAMILY SSF53955 10 161 2.3E-55 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS09875 0cf9844032c20200ea52d8ebd8251f06 163 Gene3D G3DSA:1.10.530.40 24 161 3.2E-56 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 LK04_RS09875 0cf9844032c20200ea52d8ebd8251f06 163 PANTHER PTHR38107 1 163 1.4E-60 T 22-04-2016 LK04_RS09875 0cf9844032c20200ea52d8ebd8251f06 163 PANTHER PTHR38107:SF2 1 163 1.4E-60 T 22-04-2016 LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 PANTHER PTHR34183:SF1 284 362 3.2E-101 T 22-04-2016 LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 PANTHER PTHR34183:SF1 22 235 3.2E-101 T 22-04-2016 LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 Gene3D G3DSA:2.40.40.10 116 169 3.5E-5 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 Pfam PF03330 Lytic transglycolase 79 166 7.6E-24 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 Pfam PF05036 Sporulation related domain 288 359 1.0E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 Gene3D G3DSA:3.30.70.1070 285 360 2.3E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 PANTHER PTHR34183 284 362 3.2E-101 T 22-04-2016 LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 PANTHER PTHR34183 22 235 3.2E-101 T 22-04-2016 LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 79 188 2.2E-33 T 22-04-2016 IPR012997 Rare lipoprotein A LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 SUPERFAMILY SSF110997 288 356 2.48E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS13390 1d01341938ef72fd72908dcdf5ec026f 365 SUPERFAMILY SSF50685 75 169 3.84E-9 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LK04_RS12050 56e597c74bf903548df24ed5a3a30d0d 334 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 317 2.9E-118 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 LK04_RS12050 56e597c74bf903548df24ed5a3a30d0d 334 PANTHER PTHR30160 1 334 8.2E-102 T 22-04-2016 LK04_RS12050 56e597c74bf903548df24ed5a3a30d0d 334 Gene3D G3DSA:3.40.50.300 47 108 1.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12050 56e597c74bf903548df24ed5a3a30d0d 334 Gene3D G3DSA:3.40.50.300 155 165 1.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12050 56e597c74bf903548df24ed5a3a30d0d 334 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 322 2.2E-103 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 LK04_RS12050 56e597c74bf903548df24ed5a3a30d0d 334 SUPERFAMILY SSF52540 46 180 9.51E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12050 56e597c74bf903548df24ed5a3a30d0d 334 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 41.759 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 LK04_RS12050 56e597c74bf903548df24ed5a3a30d0d 334 PANTHER PTHR30160:SF13 1 334 8.2E-102 T 22-04-2016 LK04_RS06820 db59e33ab656c7c736507fbc7403b2e1 232 SUPERFAMILY SSF109604 1 214 1.16E-58 T 22-04-2016 LK04_RS06820 db59e33ab656c7c736507fbc7403b2e1 232 PANTHER PTHR33594 8 225 9.3E-57 T 22-04-2016 LK04_RS06820 db59e33ab656c7c736507fbc7403b2e1 232 PANTHER PTHR33594:SF1 8 225 9.3E-57 T 22-04-2016 LK04_RS06820 db59e33ab656c7c736507fbc7403b2e1 232 Gene3D G3DSA:1.10.3210.10 2 145 4.8E-39 T 22-04-2016 IPR006674 HD domain LK04_RS06820 db59e33ab656c7c736507fbc7403b2e1 232 Gene3D G3DSA:1.10.3210.10 184 214 4.8E-39 T 22-04-2016 IPR006674 HD domain LK04_RS06820 db59e33ab656c7c736507fbc7403b2e1 232 Pfam PF01966 HD domain 28 130 6.0E-12 T 22-04-2016 IPR006674 HD domain LK04_RS06820 db59e33ab656c7c736507fbc7403b2e1 232 SMART SM00471 22 141 7.3E-7 T 22-04-2016 IPR003607 HD/PDEase domain LK04_RS04700 99b16f710777babc912a08f19897662d 306 PANTHER PTHR30419 1 292 7.6E-107 T 22-04-2016 LK04_RS04700 99b16f710777babc912a08f19897662d 306 Pfam PF03466 LysR substrate binding domain 89 293 1.1E-42 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS04700 99b16f710777babc912a08f19897662d 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.4E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS04700 99b16f710777babc912a08f19897662d 306 SUPERFAMILY SSF46785 3 113 3.83E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04700 99b16f710777babc912a08f19897662d 306 PANTHER PTHR30419:SF3 1 292 7.6E-107 T 22-04-2016 LK04_RS04700 99b16f710777babc912a08f19897662d 306 Gene3D G3DSA:3.40.190.10 91 177 2.0E-16 T 22-04-2016 LK04_RS04700 99b16f710777babc912a08f19897662d 306 Gene3D G3DSA:1.10.10.10 4 88 6.6E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04700 99b16f710777babc912a08f19897662d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS04700 99b16f710777babc912a08f19897662d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS04700 99b16f710777babc912a08f19897662d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS04700 99b16f710777babc912a08f19897662d 306 SUPERFAMILY SSF53850 90 294 1.1E-38 T 22-04-2016 LK04_RS04700 99b16f710777babc912a08f19897662d 306 Gene3D G3DSA:3.40.190.10 178 262 2.2E-17 T 22-04-2016 LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 8.6E-21 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 7.5E-18 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 PANTHER PTHR33910:SF1 1 126 4.0E-35 T 22-04-2016 LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 PANTHER PTHR33910 1 126 4.0E-35 T 22-04-2016 LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.404 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 3.2E-40 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 3.2E-40 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 3.2E-40 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 3.2E-40 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LK04_RS17805 2640fac8639fe96dea4e68d2b75a18de 127 Gene3D G3DSA:1.20.5.1030 64 123 8.5E-26 T 22-04-2016 LK04_RS09085 fc8d3db3cd7f0c8c92320ced6c3d336a 367 SUPERFAMILY SSF50331 237 351 1.34E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LK04_RS09085 fc8d3db3cd7f0c8c92320ced6c3d336a 367 SMART SM00382 28 211 1.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS09085 fc8d3db3cd7f0c8c92320ced6c3d336a 367 SUPERFAMILY SSF52540 4 243 1.09E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09085 fc8d3db3cd7f0c8c92320ced6c3d336a 367 PANTHER PTHR24220:SF151 5 243 1.6E-125 T 22-04-2016 LK04_RS09085 fc8d3db3cd7f0c8c92320ced6c3d336a 367 Pfam PF08402 TOBE domain 271 343 8.6E-11 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LK04_RS09085 fc8d3db3cd7f0c8c92320ced6c3d336a 367 Gene3D G3DSA:3.40.50.300 3 234 6.8E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09085 fc8d3db3cd7f0c8c92320ced6c3d336a 367 PANTHER PTHR24220 5 243 1.6E-125 T 22-04-2016 LK04_RS09085 fc8d3db3cd7f0c8c92320ced6c3d336a 367 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS09085 fc8d3db3cd7f0c8c92320ced6c3d336a 367 Gene3D G3DSA:2.40.50.140 274 335 2.6E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS09085 fc8d3db3cd7f0c8c92320ced6c3d336a 367 Pfam PF00005 ABC transporter 19 161 7.4E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS02025 80803afa9e5dc48e0de5bccd07fb0e7b 299 PANTHER PTHR30537 1 294 1.7E-144 T 22-04-2016 LK04_RS02025 80803afa9e5dc48e0de5bccd07fb0e7b 299 Pfam PF03466 LysR substrate binding domain 91 292 9.6E-39 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS02025 80803afa9e5dc48e0de5bccd07fb0e7b 299 SUPERFAMILY SSF46785 3 113 6.09E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02025 80803afa9e5dc48e0de5bccd07fb0e7b 299 PANTHER PTHR30537:SF20 1 294 1.7E-144 T 22-04-2016 LK04_RS02025 80803afa9e5dc48e0de5bccd07fb0e7b 299 Gene3D G3DSA:3.40.190.10 179 258 1.0E-19 T 22-04-2016 LK04_RS02025 80803afa9e5dc48e0de5bccd07fb0e7b 299 SUPERFAMILY SSF53850 91 296 1.05E-42 T 22-04-2016 LK04_RS02025 80803afa9e5dc48e0de5bccd07fb0e7b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.0E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02025 80803afa9e5dc48e0de5bccd07fb0e7b 299 Gene3D G3DSA:3.40.190.10 93 178 1.6E-22 T 22-04-2016 LK04_RS02025 80803afa9e5dc48e0de5bccd07fb0e7b 299 Gene3D G3DSA:1.10.10.10 3 88 2.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18295 c46130d6fe83517ef9f78627fb8e6367 334 PRINTS PR00735 Glycosyl hydrolase family 8 signature 237 246 3.0E-30 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LK04_RS18295 c46130d6fe83517ef9f78627fb8e6367 334 PRINTS PR00735 Glycosyl hydrolase family 8 signature 109 127 3.0E-30 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LK04_RS18295 c46130d6fe83517ef9f78627fb8e6367 334 PRINTS PR00735 Glycosyl hydrolase family 8 signature 317 331 3.0E-30 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LK04_RS18295 c46130d6fe83517ef9f78627fb8e6367 334 PRINTS PR00735 Glycosyl hydrolase family 8 signature 212 223 3.0E-30 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LK04_RS18295 c46130d6fe83517ef9f78627fb8e6367 334 PRINTS PR00735 Glycosyl hydrolase family 8 signature 51 64 3.0E-30 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LK04_RS18295 c46130d6fe83517ef9f78627fb8e6367 334 PRINTS PR00735 Glycosyl hydrolase family 8 signature 172 189 3.0E-30 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LK04_RS18295 c46130d6fe83517ef9f78627fb8e6367 334 SUPERFAMILY SSF48208 23 332 4.37E-86 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LK04_RS18295 c46130d6fe83517ef9f78627fb8e6367 334 Gene3D G3DSA:1.50.10.10 22 332 4.5E-75 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 LK04_RS18295 c46130d6fe83517ef9f78627fb8e6367 334 Pfam PF01270 Glycosyl hydrolases family 8 6 330 1.3E-107 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LK04_RS11320 ee49a8928d7462388bb85a6c548421fe 346 Pfam PF02504 Fatty acid synthesis protein 5 331 4.3E-116 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 LK04_RS11320 ee49a8928d7462388bb85a6c548421fe 346 PANTHER PTHR30100:SF1 2 346 3.3E-143 T 22-04-2016 LK04_RS11320 ee49a8928d7462388bb85a6c548421fe 346 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 141.046 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 LK04_RS11320 ee49a8928d7462388bb85a6c548421fe 346 PIRSF PIRSF002465 2 344 7.5E-124 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 LK04_RS11320 ee49a8928d7462388bb85a6c548421fe 346 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 340 4.4E-135 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 LK04_RS11320 ee49a8928d7462388bb85a6c548421fe 346 PANTHER PTHR30100 2 346 3.3E-143 T 22-04-2016 LK04_RS11320 ee49a8928d7462388bb85a6c548421fe 346 SUPERFAMILY SSF53659 4 340 4.93E-101 T 22-04-2016 LK04_RS11320 ee49a8928d7462388bb85a6c548421fe 346 Gene3D G3DSA:3.40.718.10 3 339 1.6E-134 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 PANTHER PTHR38418:SF1 17 327 1.9E-42 T 22-04-2016 LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 SMART SM00116 285 327 2.8 T 22-04-2016 IPR000644 CBS domain LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 SMART SM00116 220 268 0.16 T 22-04-2016 IPR000644 CBS domain LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 SUPERFAMILY SSF53697 23 292 2.22E-60 T 22-04-2016 LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 57 323 5.1E-101 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 Gene3D G3DSA:3.10.580.10 204 325 5.8E-33 T 22-04-2016 LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 Gene3D G3DSA:3.40.50.10490 23 203 3.1E-48 T 22-04-2016 LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 PIRSF PIRSF004692 3 327 4.0E-128 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 Pfam PF01380 SIS domain 54 184 3.9E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 SUPERFAMILY SSF54631 276 327 2.05E-8 T 22-04-2016 LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 PANTHER PTHR38418 17 327 1.9E-42 T 22-04-2016 LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 Pfam PF00571 CBS domain 279 324 2.6E-8 T 22-04-2016 IPR000644 CBS domain LK04_RS02800 cb89e9349110d8487d8c938a4f65613b 327 Pfam PF00571 CBS domain 215 267 3.4E-8 T 22-04-2016 IPR000644 CBS domain LK04_RS00985 34f0cf7fbc2b98205bd0afb3f8ff1052 129 Gene3D G3DSA:3.30.420.80 9 129 3.0E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LK04_RS00985 34f0cf7fbc2b98205bd0afb3f8ff1052 129 SUPERFAMILY SSF53137 14 129 9.81E-48 T 22-04-2016 LK04_RS00985 34f0cf7fbc2b98205bd0afb3f8ff1052 129 Pfam PF00411 Ribosomal protein S11 19 128 1.8E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LK04_RS00985 34f0cf7fbc2b98205bd0afb3f8ff1052 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.594 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LK04_RS00985 34f0cf7fbc2b98205bd0afb3f8ff1052 129 PANTHER PTHR11759 11 129 2.2E-73 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LK04_RS00985 34f0cf7fbc2b98205bd0afb3f8ff1052 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.4E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00985 34f0cf7fbc2b98205bd0afb3f8ff1052 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site LK04_RS00985 34f0cf7fbc2b98205bd0afb3f8ff1052 129 PIRSF PIRSF002131 1 129 1.5E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LK04_RS07390 0c5b84891657a164e7ae8e3c837761f4 273 SUPERFAMILY SSF117396 2 249 5.49E-58 T 22-04-2016 IPR002763 Protein of unknown function DUF72 LK04_RS07390 0c5b84891657a164e7ae8e3c837761f4 273 Pfam PF01904 Protein of unknown function DUF72 21 243 2.2E-44 T 22-04-2016 IPR002763 Protein of unknown function DUF72 LK04_RS07390 0c5b84891657a164e7ae8e3c837761f4 273 PANTHER PTHR30348 3 272 4.1E-72 T 22-04-2016 LK04_RS07390 0c5b84891657a164e7ae8e3c837761f4 273 PANTHER PTHR30348:SF3 3 272 4.1E-72 T 22-04-2016 LK04_RS07390 0c5b84891657a164e7ae8e3c837761f4 273 Gene3D G3DSA:3.20.20.410 2 253 3.4E-61 T 22-04-2016 IPR002763 Protein of unknown function DUF72 LK04_RS11495 76664ee32b059e7b2ec51f859731406e 307 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 307 51.18 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 LK04_RS11495 76664ee32b059e7b2ec51f859731406e 307 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 298 9.1E-103 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LK04_RS11495 76664ee32b059e7b2ec51f859731406e 307 PANTHER PTHR30606 2 307 2.8E-158 T 22-04-2016 LK04_RS11495 76664ee32b059e7b2ec51f859731406e 307 PANTHER PTHR30606:SF5 2 307 2.8E-158 T 22-04-2016 LK04_RS11495 76664ee32b059e7b2ec51f859731406e 307 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 307 3.8E-140 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 LK04_RS11495 76664ee32b059e7b2ec51f859731406e 307 PIRSF PIRSF026649 2 307 2.5E-97 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LK04_RS01760 d739d4395fd6310233fa1706274b213c 474 SUPERFAMILY SSF55073 305 460 5.18E-35 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS01760 d739d4395fd6310233fa1706274b213c 474 Pfam PF00990 Diguanylate cyclase, GGDEF domain 300 459 1.7E-35 T 22-04-2016 IPR000160 GGDEF domain LK04_RS01760 d739d4395fd6310233fa1706274b213c 474 SMART SM00267 289 463 2.2E-46 T 22-04-2016 IPR000160 GGDEF domain LK04_RS01760 d739d4395fd6310233fa1706274b213c 474 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 298 460 3.3E-37 T 22-04-2016 IPR000160 GGDEF domain LK04_RS01760 d739d4395fd6310233fa1706274b213c 474 PANTHER PTHR10799 330 461 7.6E-19 T 22-04-2016 LK04_RS01760 d739d4395fd6310233fa1706274b213c 474 PANTHER PTHR10799 223 314 7.6E-19 T 22-04-2016 LK04_RS01760 d739d4395fd6310233fa1706274b213c 474 Gene3D G3DSA:3.30.70.270 302 461 6.7E-41 T 22-04-2016 LK04_RS01760 d739d4395fd6310233fa1706274b213c 474 PANTHER PTHR10799:SF710 330 461 7.6E-19 T 22-04-2016 LK04_RS01760 d739d4395fd6310233fa1706274b213c 474 PANTHER PTHR10799:SF710 223 314 7.6E-19 T 22-04-2016 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 SUPERFAMILY SSF53187 4 180 4.57E-57 T 22-04-2016 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 SUPERFAMILY SSF53187 305 381 4.57E-57 T 22-04-2016 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 PANTHER PTHR11014 7 381 1.6E-220 T 22-04-2016 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 Pfam PF01546 Peptidase family M20/M25/M40 76 378 1.1E-31 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 5.3E-156 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 Gene3D G3DSA:3.30.70.360 190 290 3.1E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 PANTHER PTHR11014:SF75 7 381 1.6E-220 T 22-04-2016 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 Pfam PF07687 Peptidase dimerisation domain 178 288 4.0E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 SUPERFAMILY SSF55031 181 294 2.84E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 65.845 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 Gene3D G3DSA:3.40.630.10 6 189 1.7E-60 T 22-04-2016 LK04_RS19655 225738234ddc1445d86fbc762bb65e18 382 Gene3D G3DSA:3.40.630.10 323 381 1.7E-60 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 Gene3D G3DSA:3.30.70.1430 49 151 1.8E-29 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 SUPERFAMILY SSF82866 825 1024 8.37E-44 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 SUPERFAMILY SSF82714 192 275 9.29E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 Gene3D G3DSA:3.30.2090.10 720 801 7.3E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PANTHER PTHR32063 9 1037 0.0 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 Gene3D G3DSA:1.10.3850.10 807 1024 5.0E-56 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 8.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 8.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 8.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 8.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 8.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 8.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 8.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 8.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 8.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 Gene3D G3DSA:3.30.70.1430 568 655 3.5E-11 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 32.78 T 22-04-2016 IPR022831 Multidrug resistance protein MdtB LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 SUPERFAMILY SSF82714 719 800 3.14E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 Gene3D G3DSA:1.20.1640.10 294 509 2.8E-55 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 SUPERFAMILY SSF82866 299 498 1.12E-44 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 Gene3D G3DSA:3.30.2090.10 192 275 3.0E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 SUPERFAMILY SSF82693 146 191 9.94E-22 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 SUPERFAMILY SSF82693 277 333 9.94E-22 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 PANTHER PTHR32063:SF21 9 1037 0.0 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 Pfam PF00873 AcrB/AcrD/AcrF family 14 1022 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 SUPERFAMILY SSF82693 802 849 1.05E-10 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 SUPERFAMILY SSF82693 675 715 1.05E-10 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 SUPERFAMILY SSF82693 565 662 9.16E-16 T 22-04-2016 LK04_RS06000 1da1fb0480de32738d3202f64a6cc17b 1040 SUPERFAMILY SSF82693 49 138 6.8E-23 T 22-04-2016 LK04_RS19330 15a5d48de85bd1f7441665e264d553e2 462 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 3.7E-204 T 22-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 LK04_RS19330 15a5d48de85bd1f7441665e264d553e2 462 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS19330 15a5d48de85bd1f7441665e264d553e2 462 Pfam PF02378 Phosphotransferase system, EIIC 112 404 2.6E-34 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS19330 15a5d48de85bd1f7441665e264d553e2 462 PANTHER PTHR30175 1 461 4.2E-245 T 22-04-2016 LK04_RS19330 15a5d48de85bd1f7441665e264d553e2 462 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 3.9E-15 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS19330 15a5d48de85bd1f7441665e264d553e2 462 Gene3D G3DSA:3.30.1360.60 6 83 5.6E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS19330 15a5d48de85bd1f7441665e264d553e2 462 SUPERFAMILY SSF55604 9 82 2.09E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS19330 15a5d48de85bd1f7441665e264d553e2 462 Pfam PF00367 phosphotransferase system, EIIB 11 41 6.8E-15 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS19330 15a5d48de85bd1f7441665e264d553e2 462 PANTHER PTHR30175:SF4 1 461 4.2E-245 T 22-04-2016 LK04_RS09940 9e07b1560465ab238e357421378b27a4 67 Pfam PF09048 Cro 1 59 3.2E-26 T 22-04-2016 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 LK04_RS09940 9e07b1560465ab238e357421378b27a4 67 SUPERFAMILY SSF47413 1 63 1.06E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS09940 9e07b1560465ab238e357421378b27a4 67 PIRSF PIRSF003217 1 65 2.4E-22 T 22-04-2016 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 LK04_RS09940 9e07b1560465ab238e357421378b27a4 67 ProDom PD054632 CRO REPRESSOR TRANSCRIPTION REGULATORY 3D-STRUCTURE DNA-BINDING DIRECT EARLY REGULATION SEQUENCING 3 62 2.0E-12 T 22-04-2016 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 LK04_RS09940 9e07b1560465ab238e357421378b27a4 67 Gene3D G3DSA:3.30.240.10 1 62 2.2E-26 T 22-04-2016 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 7.0E-7 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 2.6E-9 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 179 6.2E-7 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 SUPERFAMILY SSF51161 32 316 7.15E-87 T 22-04-2016 IPR011004 Trimeric LpxA-like LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 Gene3D G3DSA:2.160.10.10 140 309 2.0E-42 T 22-04-2016 LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 Gene3D G3DSA:2.160.10.10 99 139 1.1E-11 T 22-04-2016 LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 89 4.8E-22 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 8.6E-128 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 36.059 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.22 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS14935 579cf9371cbe91a680e7d88516242d81 341 PANTHER PTHR22572 61 295 2.4E-65 T 22-04-2016 LK04_RS06770 0c787d6075b4a5306bec213dbb7ac7cc 304 PANTHER PTHR11795:SF371 5 304 8.8E-130 T 22-04-2016 LK04_RS06770 0c787d6075b4a5306bec213dbb7ac7cc 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 288 3.5E-52 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS06770 0c787d6075b4a5306bec213dbb7ac7cc 304 PANTHER PTHR11795 5 304 8.8E-130 T 22-04-2016 LK04_RS00160 c3b74603a9755032f52cf501fb6b437e 164 SUPERFAMILY SSF55729 2 163 8.41E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS00160 c3b74603a9755032f52cf501fb6b437e 164 PANTHER PTHR23091:SF262 2 164 1.2E-33 T 22-04-2016 LK04_RS00160 c3b74603a9755032f52cf501fb6b437e 164 Pfam PF00583 Acetyltransferase (GNAT) family 57 138 3.0E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS00160 c3b74603a9755032f52cf501fb6b437e 164 Gene3D G3DSA:3.40.630.30 3 164 6.4E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS00160 c3b74603a9755032f52cf501fb6b437e 164 PANTHER PTHR23091 2 164 1.2E-33 T 22-04-2016 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 SUPERFAMILY SSF51905 5 177 3.67E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 SUPERFAMILY SSF51905 266 382 3.67E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 Gene3D G3DSA:3.50.50.60 267 352 1.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 Gene3D G3DSA:3.50.50.60 5 182 1.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 1.5E-16 T 22-04-2016 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.5E-16 T 22-04-2016 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.5E-16 T 22-04-2016 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 1.5E-16 T 22-04-2016 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 389 9.4E-130 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 PANTHER PTHR13789:SF233 2 390 3.3E-214 T 22-04-2016 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 PANTHER PTHR13789 2 390 3.3E-214 T 22-04-2016 LK04_RS13295 7cecef95731bad64ac21491f9b186527 390 Pfam PF01494 FAD binding domain 6 337 2.6E-27 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 LK04_RS11235 7a76900e15793e6a60b98e8c7f759250 271 Gene3D G3DSA:3.90.1200.10 75 254 1.1E-16 T 22-04-2016 LK04_RS11235 7a76900e15793e6a60b98e8c7f759250 271 SUPERFAMILY SSF56112 5 253 1.75E-30 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS11235 7a76900e15793e6a60b98e8c7f759250 271 Pfam PF01636 Phosphotransferase enzyme family 30 226 2.3E-14 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase LK04_RS02585 85a9de1dd871f07536f56ba0c30e8e52 493 SUPERFAMILY SSF50475 10 323 2.75E-63 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS02585 85a9de1dd871f07536f56ba0c30e8e52 493 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 23 435 8.5E-103 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 LK04_RS02585 85a9de1dd871f07536f56ba0c30e8e52 493 Gene3D G3DSA:3.40.1670.10 341 466 1.1E-34 T 22-04-2016 LK04_RS02585 85a9de1dd871f07536f56ba0c30e8e52 493 PANTHER PTHR30108:SF1 8 469 2.6E-74 T 22-04-2016 LK04_RS02585 85a9de1dd871f07536f56ba0c30e8e52 493 SUPERFAMILY SSF143968 331 484 7.32E-36 T 22-04-2016 LK04_RS02585 85a9de1dd871f07536f56ba0c30e8e52 493 PANTHER PTHR30108 8 469 2.6E-74 T 22-04-2016 LK04_RS17110 21e91e89d40637ce9fef2e364910aee0 546 SMART SM01120 381 546 2.3E-47 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 LK04_RS17110 21e91e89d40637ce9fef2e364910aee0 546 Gene3D G3DSA:3.30.1180.20 186 326 3.9E-33 T 22-04-2016 LK04_RS17110 21e91e89d40637ce9fef2e364910aee0 546 Pfam PF02733 Dak1 domain 32 322 2.6E-101 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 LK04_RS17110 21e91e89d40637ce9fef2e364910aee0 546 SUPERFAMILY SSF82549 3 326 1.39E-104 T 22-04-2016 LK04_RS17110 21e91e89d40637ce9fef2e364910aee0 546 PANTHER PTHR28629:SF4 1 537 4.7E-189 T 22-04-2016 LK04_RS17110 21e91e89d40637ce9fef2e364910aee0 546 Gene3D G3DSA:3.40.50.10440 12 184 1.8E-70 T 22-04-2016 LK04_RS17110 21e91e89d40637ce9fef2e364910aee0 546 SUPERFAMILY SSF101473 356 543 2.22E-46 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 LK04_RS17110 21e91e89d40637ce9fef2e364910aee0 546 Pfam PF02734 DAK2 domain 381 544 2.5E-37 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 LK04_RS17110 21e91e89d40637ce9fef2e364910aee0 546 PANTHER PTHR28629 1 537 4.7E-189 T 22-04-2016 LK04_RS16790 14d882b2b59b4b6e5fc156ceb2b2bed4 503 Gene3D G3DSA:1.20.1250.20 276 450 4.6E-22 T 22-04-2016 LK04_RS16790 14d882b2b59b4b6e5fc156ceb2b2bed4 503 PANTHER PTHR23508 269 481 2.0E-233 T 22-04-2016 LK04_RS16790 14d882b2b59b4b6e5fc156ceb2b2bed4 503 PANTHER PTHR23508 9 229 2.0E-233 T 22-04-2016 LK04_RS16790 14d882b2b59b4b6e5fc156ceb2b2bed4 503 SUPERFAMILY SSF103473 10 203 8.89E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS16790 14d882b2b59b4b6e5fc156ceb2b2bed4 503 SUPERFAMILY SSF103473 256 467 8.89E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS16790 14d882b2b59b4b6e5fc156ceb2b2bed4 503 PANTHER PTHR23508:SF3 269 481 2.0E-233 T 22-04-2016 LK04_RS16790 14d882b2b59b4b6e5fc156ceb2b2bed4 503 PANTHER PTHR23508:SF3 9 229 2.0E-233 T 22-04-2016 LK04_RS16790 14d882b2b59b4b6e5fc156ceb2b2bed4 503 Gene3D G3DSA:1.20.1250.20 19 203 4.1E-36 T 22-04-2016 LK04_RS16790 14d882b2b59b4b6e5fc156ceb2b2bed4 503 Pfam PF07690 Major Facilitator Superfamily 298 465 8.1E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS16790 14d882b2b59b4b6e5fc156ceb2b2bed4 503 Pfam PF07690 Major Facilitator Superfamily 26 294 2.3E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS15345 f45cd1b5e5e5a60bfe89407e68ae1837 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 25.768 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 LK04_RS15345 f45cd1b5e5e5a60bfe89407e68ae1837 202 Pfam PF01121 Dephospho-CoA kinase 4 178 7.8E-66 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 LK04_RS15345 f45cd1b5e5e5a60bfe89407e68ae1837 202 PANTHER PTHR10695 1 191 3.6E-68 T 22-04-2016 LK04_RS15345 f45cd1b5e5e5a60bfe89407e68ae1837 202 Gene3D G3DSA:3.40.50.300 1 195 4.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15345 f45cd1b5e5e5a60bfe89407e68ae1837 202 SUPERFAMILY SSF52540 1 195 2.91E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15345 f45cd1b5e5e5a60bfe89407e68ae1837 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 186 2.5E-59 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 LK04_RS01070 9f1572e9775d314c41c5dc28a1ee512f 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.1E-7 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS01070 9f1572e9775d314c41c5dc28a1ee512f 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 47 1.2E-4 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS01070 9f1572e9775d314c41c5dc28a1ee512f 184 PANTHER PTHR13061 5 178 1.4E-70 T 22-04-2016 LK04_RS01070 9f1572e9775d314c41c5dc28a1ee512f 184 SUPERFAMILY SSF51161 6 176 1.8E-43 T 22-04-2016 IPR011004 Trimeric LpxA-like LK04_RS01070 9f1572e9775d314c41c5dc28a1ee512f 184 Gene3D G3DSA:2.160.10.10 7 177 3.6E-43 T 22-04-2016 LK04_RS18680 3098994743ee3f0afa005009bad676ab 156 PANTHER PTHR33221:SF7 3 134 2.6E-50 T 22-04-2016 LK04_RS18680 3098994743ee3f0afa005009bad676ab 156 PANTHER PTHR33221 3 134 2.6E-50 T 22-04-2016 LK04_RS18680 3098994743ee3f0afa005009bad676ab 156 Pfam PF02082 Transcriptional regulator 1 81 8.9E-20 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type LK04_RS18680 3098994743ee3f0afa005009bad676ab 156 SUPERFAMILY SSF46785 6 132 2.82E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18680 3098994743ee3f0afa005009bad676ab 156 Gene3D G3DSA:1.10.10.10 1 140 1.2E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 6.6E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.6E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 6.6E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PANTHER PTHR24322 146 178 1.5E-86 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PANTHER PTHR24322 7 130 1.5E-86 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 Pfam PF00106 short chain dehydrogenase 3 190 3.0E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 Gene3D G3DSA:3.40.50.720 2 254 3.4E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 SUPERFAMILY SSF51735 3 255 9.73E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PANTHER PTHR24322:SF463 146 178 1.5E-86 T 22-04-2016 LK04_RS13705 9a4d213408289c203f8a169c8ca212b3 257 PANTHER PTHR24322:SF463 7 130 1.5E-86 T 22-04-2016 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 Pfam PF00512 His Kinase A (phospho-acceptor) domain 485 548 3.5E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 SUPERFAMILY SSF158472 315 358 6.93E-8 T 22-04-2016 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 SUPERFAMILY SSF52172 726 853 1.1E-22 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 SUPERFAMILY SSF55785 365 455 4.19E-7 T 22-04-2016 IPR000014 PAS domain LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 SUPERFAMILY SSF47384 479 547 1.63E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 PANTHER PTHR24423:SF544 20 27 8.6E-141 T 22-04-2016 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 PANTHER PTHR24423:SF544 371 851 8.6E-141 T 22-04-2016 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 PANTHER PTHR24423:SF544 260 279 8.6E-141 T 22-04-2016 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 SMART SM00388 484 549 6.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 Pfam PF00072 Response regulator receiver domain 729 837 1.4E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 Gene3D G3DSA:3.30.450.20 367 467 4.8E-7 T 22-04-2016 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 Pfam PF00672 HAMP domain 291 357 1.5E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 Pfam PF12860 PAS fold 382 426 4.7E-7 T 22-04-2016 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 SMART SM00448 727 837 1.1E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 SMART SM00387 590 707 2.6E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 704 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 685 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 650 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 664 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 Gene3D G3DSA:1.10.287.130 480 535 5.2E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 Gene3D G3DSA:3.30.565.10 536 708 6.2E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 SUPERFAMILY SSF55874 540 707 2.88E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 591 705 5.1E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 SMART SM00304 517 568 120.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 SMART SM00304 310 363 5.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 Gene3D G3DSA:3.40.50.2300 726 846 6.4E-24 T 22-04-2016 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 PANTHER PTHR24423 20 27 8.6E-141 T 22-04-2016 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 PANTHER PTHR24423 371 851 8.6E-141 T 22-04-2016 LK04_RS06705 e2191d05a2600be0018b4e21b910cd0c 861 PANTHER PTHR24423 260 279 8.6E-141 T 22-04-2016 LK04_RS07940 92f9d9c9b81e5494577062bd6dce3322 488 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 30 488 1.7E-118 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase LK04_RS07940 92f9d9c9b81e5494577062bd6dce3322 488 PANTHER PTHR30576 3 488 8.7E-174 T 22-04-2016 LK04_RS07940 92f9d9c9b81e5494577062bd6dce3322 488 PANTHER PTHR30576:SF4 3 488 8.7E-174 T 22-04-2016 LK04_RS07940 92f9d9c9b81e5494577062bd6dce3322 488 Pfam PF13727 CoA-binding domain 96 206 1.3E-8 T 22-04-2016 LK04_RS07940 92f9d9c9b81e5494577062bd6dce3322 488 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 28 488 2.1E-166 T 22-04-2016 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 LK04_RS07940 92f9d9c9b81e5494577062bd6dce3322 488 Pfam PF02397 Bacterial sugar transferase 292 482 4.8E-55 T 22-04-2016 IPR003362 Bacterial sugar transferase LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 SUPERFAMILY SSF52440 1 113 5.04E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 4.4E-249 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.2E-38 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 Gene3D G3DSA:3.40.50.20 1 129 2.4E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.2E-43 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 SUPERFAMILY SSF56059 83 347 3.7E-69 T 22-04-2016 LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 Gene3D G3DSA:3.30.1490.20 130 203 1.7E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 SUPERFAMILY SSF51246 331 444 2.98E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 SMART SM00878 336 441 2.0E-63 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 1.6E-84 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 PANTHER PTHR18866 1 442 1.6E-303 T 22-04-2016 LK04_RS01155 dc6db9d7966b9947628da045edf80307 449 Gene3D G3DSA:3.30.470.20 204 444 2.8E-100 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 SUPERFAMILY SSF55021 280 377 8.85E-22 T 22-04-2016 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 7.9E-39 T 22-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 SUPERFAMILY SSF53850 105 291 9.44E-57 T 22-04-2016 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 PANTHER PTHR21022 3 376 4.9E-150 T 22-04-2016 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 PANTHER PTHR21022:SF0 3 376 4.9E-150 T 22-04-2016 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 Pfam PF00800 Prephenate dehydratase 106 287 1.8E-61 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 SMART SM00830 11 91 9.9E-24 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 PIRSF PIRSF001500 1 380 2.2E-139 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 Gene3D G3DSA:3.40.190.10 194 273 4.5E-29 T 22-04-2016 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 Gene3D G3DSA:1.20.59.10 2 106 2.3E-43 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 Gene3D G3DSA:3.40.190.10 107 193 8.2E-31 T 22-04-2016 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 SUPERFAMILY SSF48600 6 93 9.89E-22 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 Pfam PF01817 Chorismate mutase type II 11 89 4.0E-16 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LK04_RS03685 be17da1b47dc88da06797b5eed908f71 387 Gene3D G3DSA:3.30.70.260 294 377 1.5E-24 T 22-04-2016 LK04_RS04060 6b7a8cbd41f369520043c28d4d451f81 279 PANTHER PTHR30514:SF5 1 274 2.1E-152 T 22-04-2016 LK04_RS04060 6b7a8cbd41f369520043c28d4d451f81 279 SUPERFAMILY SSF53697 102 276 1.49E-34 T 22-04-2016 LK04_RS04060 6b7a8cbd41f369520043c28d4d451f81 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 75 9.4E-26 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LK04_RS04060 6b7a8cbd41f369520043c28d4d451f81 279 Gene3D G3DSA:3.40.50.10490 100 260 1.4E-35 T 22-04-2016 LK04_RS04060 6b7a8cbd41f369520043c28d4d451f81 279 Pfam PF01380 SIS domain 125 254 1.6E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS04060 6b7a8cbd41f369520043c28d4d451f81 279 SUPERFAMILY SSF46689 1 76 9.14E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS04060 6b7a8cbd41f369520043c28d4d451f81 279 PANTHER PTHR30514 1 274 2.1E-152 T 22-04-2016 LK04_RS04060 6b7a8cbd41f369520043c28d4d451f81 279 Gene3D G3DSA:1.10.10.10 1 76 3.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19490 9e1160af9989845101de6fda3e216115 143 PANTHER PTHR12231 1 143 4.0E-41 T 22-04-2016 LK04_RS19490 9e1160af9989845101de6fda3e216115 143 PANTHER PTHR12231:SF138 1 143 4.0E-41 T 22-04-2016 LK04_RS19490 9e1160af9989845101de6fda3e216115 143 SMART SM00450 40 138 3.1E-22 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS19490 9e1160af9989845101de6fda3e216115 143 SUPERFAMILY SSF52821 16 142 5.89E-33 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS19490 9e1160af9989845101de6fda3e216115 143 Gene3D G3DSA:3.40.250.10 21 142 6.5E-30 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS19490 9e1160af9989845101de6fda3e216115 143 Pfam PF00581 Rhodanese-like domain 44 133 1.8E-18 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS07080 83a67ebd938c225435af5f7ca1ecda49 250 PANTHER PTHR24220:SF327 5 250 4.9E-140 T 22-04-2016 LK04_RS07080 83a67ebd938c225435af5f7ca1ecda49 250 SUPERFAMILY SSF52540 4 243 7.48E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07080 83a67ebd938c225435af5f7ca1ecda49 250 SMART SM00382 28 221 1.3E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS07080 83a67ebd938c225435af5f7ca1ecda49 250 PIRSF PIRSF039085 1 249 5.0E-111 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS07080 83a67ebd938c225435af5f7ca1ecda49 250 Gene3D G3DSA:3.40.50.300 3 245 1.5E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07080 83a67ebd938c225435af5f7ca1ecda49 250 Pfam PF00005 ABC transporter 19 173 3.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS07080 83a67ebd938c225435af5f7ca1ecda49 250 PANTHER PTHR24220 5 250 4.9E-140 T 22-04-2016 LK04_RS07080 83a67ebd938c225435af5f7ca1ecda49 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS15680 03f251c5a1e7a041a6b9a383b2fdaf08 589 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 586 1.8E-177 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like LK04_RS15680 03f251c5a1e7a041a6b9a383b2fdaf08 589 PIRSF PIRSF028304 1 588 1.2E-170 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like LK04_RS15680 03f251c5a1e7a041a6b9a383b2fdaf08 589 PANTHER PTHR35370:SF4 2 589 1.7E-264 T 22-04-2016 LK04_RS15680 03f251c5a1e7a041a6b9a383b2fdaf08 589 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 586 5.5E-196 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like LK04_RS15680 03f251c5a1e7a041a6b9a383b2fdaf08 589 PANTHER PTHR35370 2 589 1.7E-264 T 22-04-2016 LK04_RS08695 ad491de8888cb7f21c89dd6152ef0c43 85 PANTHER PTHR34156:SF1 2 84 1.0E-28 T 22-04-2016 LK04_RS08695 ad491de8888cb7f21c89dd6152ef0c43 85 PANTHER PTHR34156 2 84 1.0E-28 T 22-04-2016 LK04_RS08695 ad491de8888cb7f21c89dd6152ef0c43 85 Gene3D G3DSA:3.30.1660.10 18 84 6.4E-24 T 22-04-2016 IPR025543 Dodecin-like LK04_RS08695 ad491de8888cb7f21c89dd6152ef0c43 85 SUPERFAMILY SSF159871 4 85 9.42E-23 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS08695 ad491de8888cb7f21c89dd6152ef0c43 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 7.8E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS16190 a407dd562673843816174b0eb4e93a54 458 SMART SM00345 6 65 2.5E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS16190 a407dd562673843816174b0eb4e93a54 458 PANTHER PTHR11751:SF10 78 457 8.1E-94 T 22-04-2016 LK04_RS16190 a407dd562673843816174b0eb4e93a54 458 Pfam PF00155 Aminotransferase class I and II 130 391 2.6E-22 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS16190 a407dd562673843816174b0eb4e93a54 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 3.9E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS16190 a407dd562673843816174b0eb4e93a54 458 SUPERFAMILY SSF53383 96 451 2.14E-79 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS16190 a407dd562673843816174b0eb4e93a54 458 Gene3D G3DSA:3.40.640.10 133 344 7.9E-54 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS16190 a407dd562673843816174b0eb4e93a54 458 PANTHER PTHR11751 78 457 8.1E-94 T 22-04-2016 LK04_RS16190 a407dd562673843816174b0eb4e93a54 458 Gene3D G3DSA:1.10.10.10 3 67 1.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16190 a407dd562673843816174b0eb4e93a54 458 SUPERFAMILY SSF46785 3 67 2.64E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04380 d99924ab318bc880db2c69f22afb19bf 285 PANTHER PTHR30193 7 280 4.9E-40 T 22-04-2016 LK04_RS04380 d99924ab318bc880db2c69f22afb19bf 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 279 4.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04380 d99924ab318bc880db2c69f22afb19bf 285 SUPERFAMILY SSF161098 20 283 2.15E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04380 d99924ab318bc880db2c69f22afb19bf 285 Gene3D G3DSA:1.10.3720.10 24 283 1.0E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 9.3E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 9.3E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 9.3E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 9.3E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 PANTHER PTHR12725:SF63 4 188 2.7E-45 T 22-04-2016 LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 PANTHER PTHR12725 4 188 2.7E-45 T 22-04-2016 LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 Gene3D G3DSA:1.10.150.240 17 81 1.1E-30 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 37 184 1.8E-16 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 Gene3D G3DSA:3.40.50.1000 3 16 1.7E-31 T 22-04-2016 IPR023214 HAD-like domain LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 Gene3D G3DSA:3.40.50.1000 83 192 1.7E-31 T 22-04-2016 IPR023214 HAD-like domain LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 Pfam PF13419 Haloacid dehalogenase-like hydrolase 86 184 1.9E-9 T 22-04-2016 IPR023214 HAD-like domain LK04_RS19220 3cb60b72563fa7b9ad9c7dda49ed894a 198 SUPERFAMILY SSF56784 3 192 1.04E-39 T 22-04-2016 IPR023214 HAD-like domain LK04_RS09685 474cc99affd40d3622dab64764fff3bb 161 PANTHER PTHR33221 1 139 2.7E-16 T 22-04-2016 LK04_RS09685 474cc99affd40d3622dab64764fff3bb 161 SUPERFAMILY SSF46785 1 137 8.16E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09685 474cc99affd40d3622dab64764fff3bb 161 PANTHER PTHR33221:SF5 1 139 2.7E-16 T 22-04-2016 LK04_RS09685 474cc99affd40d3622dab64764fff3bb 161 Pfam PF02082 Transcriptional regulator 2 83 4.4E-13 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type LK04_RS09685 474cc99affd40d3622dab64764fff3bb 161 Gene3D G3DSA:1.10.10.10 2 140 1.3E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14070 2d84e752537e1b889fbacbd26512d917 80 PIRSF PIRSF006488 1 80 1.7E-24 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LK04_RS14070 2d84e752537e1b889fbacbd26512d917 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 2.0E-17 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LK04_RS14070 2d84e752537e1b889fbacbd26512d917 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 16.854 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LK04_RS14070 2d84e752537e1b889fbacbd26512d917 80 Pfam PF02609 Exonuclease VII small subunit 11 62 5.0E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LK04_RS14070 2d84e752537e1b889fbacbd26512d917 80 Gene3D G3DSA:1.10.287.1040 7 77 2.6E-29 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LK04_RS14070 2d84e752537e1b889fbacbd26512d917 80 PANTHER PTHR34137 1 80 1.5E-26 T 22-04-2016 LK04_RS14070 2d84e752537e1b889fbacbd26512d917 80 SUPERFAMILY SSF116842 3 71 3.14E-22 T 22-04-2016 LK04_RS14070 2d84e752537e1b889fbacbd26512d917 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 3.2E-24 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LK04_RS18965 e8084294192c1eee7f1be58645363f77 244 SUPERFAMILY SSF109755 13 229 2.51E-70 T 22-04-2016 LK04_RS18965 e8084294192c1eee7f1be58645363f77 244 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 5.3E-73 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LK04_RS18965 e8084294192c1eee7f1be58645363f77 244 PIRSF PIRSF003107 7 226 8.3E-67 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LK04_RS18965 e8084294192c1eee7f1be58645363f77 244 Gene3D G3DSA:1.20.58.220 9 115 6.5E-36 T 22-04-2016 LK04_RS18965 e8084294192c1eee7f1be58645363f77 244 Pfam PF01895 PhoU domain 128 213 3.9E-17 T 22-04-2016 IPR026022 PhoU domain LK04_RS18965 e8084294192c1eee7f1be58645363f77 244 Pfam PF01895 PhoU domain 28 111 2.2E-22 T 22-04-2016 IPR026022 PhoU domain LK04_RS18965 e8084294192c1eee7f1be58645363f77 244 PANTHER PTHR10010:SF14 1 224 5.0E-94 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LK04_RS18965 e8084294192c1eee7f1be58645363f77 244 Gene3D G3DSA:1.20.58.220 127 232 4.6E-31 T 22-04-2016 LK04_RS18965 e8084294192c1eee7f1be58645363f77 244 PANTHER PTHR10010 1 224 5.0E-94 T 22-04-2016 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.537 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 371 4.3E-10 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 Gene3D G3DSA:3.40.50.720 3 92 3.7E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 PANTHER PTHR23135 1 437 5.0E-168 T 22-04-2016 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 SUPERFAMILY SSF53623 95 297 1.18E-56 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 SUPERFAMILY SSF51984 3 94 4.32E-22 T 22-04-2016 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 Gene3D G3DSA:3.40.1190.10 94 299 5.6E-66 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 PANTHER PTHR23135:SF2 1 437 5.0E-168 T 22-04-2016 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 Pfam PF08245 Mur ligase middle domain 110 280 2.0E-28 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 SUPERFAMILY SSF53244 299 437 7.32E-50 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 2.1E-126 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15415 31c7d9df03ea3cd99a74b3af58b59817 438 Gene3D G3DSA:3.90.190.20 301 433 4.0E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS02195 c1fecc966a43c4a482021819f359402d 572 SUPERFAMILY SSF55729 306 463 4.42E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS02195 c1fecc966a43c4a482021819f359402d 572 SMART SM00563 77 194 7.0E-10 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS02195 c1fecc966a43c4a482021819f359402d 572 Pfam PF13444 Acetyltransferase (GNAT) domain 322 423 4.5E-24 T 22-04-2016 LK04_RS02195 c1fecc966a43c4a482021819f359402d 572 Pfam PF01553 Acyltransferase 67 191 2.0E-11 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS02195 c1fecc966a43c4a482021819f359402d 572 Gene3D G3DSA:3.40.1130.10 68 236 6.9E-6 T 22-04-2016 LK04_RS02195 c1fecc966a43c4a482021819f359402d 572 PANTHER PTHR37323:SF1 17 572 3.7E-93 T 22-04-2016 LK04_RS02195 c1fecc966a43c4a482021819f359402d 572 PANTHER PTHR37323 17 572 3.7E-93 T 22-04-2016 LK04_RS02195 c1fecc966a43c4a482021819f359402d 572 SUPERFAMILY SSF69593 59 260 6.67E-15 T 22-04-2016 LK04_RS14105 7c5235946c43ef4146e9dfc1859e8b71 156 SUPERFAMILY SSF52121 5 154 1.11E-59 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS14105 7c5235946c43ef4146e9dfc1859e8b71 156 Gene3D G3DSA:3.40.50.960 2 152 7.2E-64 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS14105 7c5235946c43ef4146e9dfc1859e8b71 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.801 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS14105 7c5235946c43ef4146e9dfc1859e8b71 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.1E-59 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS14105 7c5235946c43ef4146e9dfc1859e8b71 156 PANTHER PTHR21058 1 156 2.3E-76 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS14105 7c5235946c43ef4146e9dfc1859e8b71 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 5.3E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS06725 f94981165c87fb2c54ede966f21f9211 227 SUPERFAMILY SSF51182 82 195 1.3E-6 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS06725 f94981165c87fb2c54ede966f21f9211 227 Pfam PF07385 Protein of unknown function (DUF1498) 1 222 4.4E-94 T 22-04-2016 IPR010864 Protein of unknown function DUF1498 KEGG: 00040+5.3.1.15 LK04_RS06725 f94981165c87fb2c54ede966f21f9211 227 Gene3D G3DSA:2.60.120.10 84 176 2.3E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS09475 fc979fae04da402097a234dae12cb63d 296 PANTHER PTHR30537 1 292 7.9E-111 T 22-04-2016 LK04_RS09475 fc979fae04da402097a234dae12cb63d 296 Gene3D G3DSA:1.10.10.10 3 87 4.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09475 fc979fae04da402097a234dae12cb63d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS09475 fc979fae04da402097a234dae12cb63d 296 SUPERFAMILY SSF46785 4 87 1.08E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09475 fc979fae04da402097a234dae12cb63d 296 Pfam PF03466 LysR substrate binding domain 88 290 7.7E-44 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS09475 fc979fae04da402097a234dae12cb63d 296 SUPERFAMILY SSF53850 90 291 1.46E-44 T 22-04-2016 LK04_RS09475 fc979fae04da402097a234dae12cb63d 296 PANTHER PTHR30537:SF5 1 292 7.9E-111 T 22-04-2016 LK04_RS09475 fc979fae04da402097a234dae12cb63d 296 Gene3D G3DSA:3.40.190.10 99 176 1.4E-22 T 22-04-2016 LK04_RS09475 fc979fae04da402097a234dae12cb63d 296 Gene3D G3DSA:3.40.190.10 177 260 1.2E-24 T 22-04-2016 LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 PANTHER PTHR11751:SF389 10 81 6.5E-30 T 22-04-2016 LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 PANTHER PTHR11751:SF389 112 130 6.5E-30 T 22-04-2016 LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 SUPERFAMILY SSF48008 114 246 2.22E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 Pfam PF07729 FCD domain 115 240 3.1E-19 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 6.7E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 Gene3D G3DSA:1.10.10.10 6 77 1.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 PANTHER PTHR11751 10 81 6.5E-30 T 22-04-2016 LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 PANTHER PTHR11751 112 130 6.5E-30 T 22-04-2016 LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 SMART SM00895 114 240 1.7E-20 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 SUPERFAMILY SSF46785 5 78 5.62E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 SMART SM00345 15 74 1.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS14525 aeb4c98ec18792e722282d9977360bba 250 Gene3D G3DSA:1.20.120.530 115 248 5.9E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS02910 01bed3ff79294536a8519dd2d1c91ba5 432 SUPERFAMILY SSF103473 15 428 5.49E-79 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02910 01bed3ff79294536a8519dd2d1c91ba5 432 Gene3D G3DSA:1.20.1250.20 233 423 3.4E-25 T 22-04-2016 LK04_RS02910 01bed3ff79294536a8519dd2d1c91ba5 432 Pfam PF07690 Major Facilitator Superfamily 26 389 7.6E-57 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS02910 01bed3ff79294536a8519dd2d1c91ba5 432 PIRSF PIRSF002808 3 430 2.0E-35 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS02910 01bed3ff79294536a8519dd2d1c91ba5 432 Gene3D G3DSA:1.20.1250.20 19 204 2.1E-45 T 22-04-2016 LK04_RS02910 01bed3ff79294536a8519dd2d1c91ba5 432 PANTHER PTHR11662 17 427 1.8E-130 T 22-04-2016 LK04_RS02910 01bed3ff79294536a8519dd2d1c91ba5 432 PANTHER PTHR11662:SF18 17 427 1.8E-130 T 22-04-2016 LK04_RS17510 05bb55d744022dd494a0c287b9645212 222 PANTHER PTHR24220:SF470 3 216 5.7E-126 T 22-04-2016 LK04_RS17510 05bb55d744022dd494a0c287b9645212 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 2.9E-93 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 LK04_RS17510 05bb55d744022dd494a0c287b9645212 222 Pfam PF00005 ABC transporter 18 165 8.7E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS17510 05bb55d744022dd494a0c287b9645212 222 Gene3D G3DSA:3.40.50.300 1 215 1.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17510 05bb55d744022dd494a0c287b9645212 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS17510 05bb55d744022dd494a0c287b9645212 222 PANTHER PTHR24220 3 216 5.7E-126 T 22-04-2016 LK04_RS17510 05bb55d744022dd494a0c287b9645212 222 SUPERFAMILY SSF52540 1 216 2.66E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17510 05bb55d744022dd494a0c287b9645212 222 SMART SM00382 27 213 8.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 PANTHER PTHR11014:SF3 2 91 2.7E-183 T 22-04-2016 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 PANTHER PTHR11014:SF3 131 409 2.7E-183 T 22-04-2016 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 406 1.0E-152 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 SUPERFAMILY SSF55031 208 319 5.23E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 53.35 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 Pfam PF01546 Peptidase family M20/M25/M40 139 400 1.8E-14 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 PANTHER PTHR11014 2 91 2.7E-183 T 22-04-2016 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 PANTHER PTHR11014 131 409 2.7E-183 T 22-04-2016 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 PIRSF PIRSF037215 1 408 3.4E-177 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 SUPERFAMILY SSF53187 322 400 9.02E-77 T 22-04-2016 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 SUPERFAMILY SSF53187 1 209 9.02E-77 T 22-04-2016 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 Gene3D G3DSA:3.40.630.10 322 407 6.1E-113 T 22-04-2016 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 Gene3D G3DSA:3.40.630.10 1 208 6.1E-113 T 22-04-2016 LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 Pfam PF07687 Peptidase dimerisation domain 206 302 8.6E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS11180 8b3b7450426ebc9b71e8cb373b5be9a3 409 Gene3D G3DSA:3.30.70.360 209 319 1.8E-41 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS12340 ba576d078cefd595e35cc3f14b0961fa 211 PANTHER PTHR11002:SF13 1 208 2.2E-78 T 22-04-2016 LK04_RS12340 ba576d078cefd595e35cc3f14b0961fa 211 PANTHER PTHR11002 1 208 2.2E-78 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LK04_RS12340 ba576d078cefd595e35cc3f14b0961fa 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LK04_RS12340 ba576d078cefd595e35cc3f14b0961fa 211 Pfam PF00484 Carbonic anhydrase 34 188 1.4E-49 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LK04_RS12340 ba576d078cefd595e35cc3f14b0961fa 211 Gene3D G3DSA:3.40.1050.10 1 204 3.0E-68 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LK04_RS12340 ba576d078cefd595e35cc3f14b0961fa 211 SUPERFAMILY SSF53056 1 203 3.27E-64 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LK04_RS12340 ba576d078cefd595e35cc3f14b0961fa 211 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LK04_RS12340 ba576d078cefd595e35cc3f14b0961fa 211 SMART SM00947 27 193 1.2E-64 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LK04_RS02020 2c267e7a80601f56ee1779fbb8e754a7 489 Gene3D G3DSA:3.90.1300.10 8 476 8.4E-94 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS02020 2c267e7a80601f56ee1779fbb8e754a7 489 PANTHER PTHR11895 1 481 1.8E-176 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS02020 2c267e7a80601f56ee1779fbb8e754a7 489 PANTHER PTHR11895:SF35 1 481 1.8E-176 T 22-04-2016 LK04_RS02020 2c267e7a80601f56ee1779fbb8e754a7 489 Pfam PF01425 Amidase 36 463 8.8E-69 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS02020 2c267e7a80601f56ee1779fbb8e754a7 489 SUPERFAMILY SSF75304 6 473 1.03E-99 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS08645 e20a4105b4844f43484ebb7636cc7f74 478 SUPERFAMILY SSF53720 2 474 4.32E-157 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS08645 e20a4105b4844f43484ebb7636cc7f74 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LK04_RS08645 e20a4105b4844f43484ebb7636cc7f74 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LK04_RS08645 e20a4105b4844f43484ebb7636cc7f74 478 Gene3D G3DSA:3.40.309.10 263 437 1.2E-67 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS08645 e20a4105b4844f43484ebb7636cc7f74 478 Pfam PF00171 Aldehyde dehydrogenase family 14 471 1.9E-161 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS08645 e20a4105b4844f43484ebb7636cc7f74 478 PANTHER PTHR11699 4 470 2.1E-196 T 22-04-2016 LK04_RS08645 e20a4105b4844f43484ebb7636cc7f74 478 Gene3D G3DSA:3.40.605.10 3 262 1.3E-89 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS15840 f98c39ff36abd81ea6b7f8fdf1675425 215 PANTHER PTHR23029:SF53 1 215 2.7E-135 T 22-04-2016 LK04_RS15840 f98c39ff36abd81ea6b7f8fdf1675425 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 1.6E-56 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LK04_RS15840 f98c39ff36abd81ea6b7f8fdf1675425 215 SMART SM00855 3 157 6.1E-25 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LK04_RS15840 f98c39ff36abd81ea6b7f8fdf1675425 215 PANTHER PTHR23029 1 215 2.7E-135 T 22-04-2016 LK04_RS15840 f98c39ff36abd81ea6b7f8fdf1675425 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 LK04_RS15840 f98c39ff36abd81ea6b7f8fdf1675425 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 51.013 T 22-04-2016 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 UniPathway: UPA00109 LK04_RS15840 f98c39ff36abd81ea6b7f8fdf1675425 215 Gene3D G3DSA:3.40.50.1240 2 209 3.4E-59 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS15840 f98c39ff36abd81ea6b7f8fdf1675425 215 SUPERFAMILY SSF53254 1 209 7.07E-57 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 1.7E-157 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 Gene3D G3DSA:3.90.1150.10 304 398 1.3E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 Gene3D G3DSA:3.90.1150.10 12 57 1.3E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 400 2.8E-217 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 PANTHER PTHR11986 1 405 5.9E-272 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 Gene3D G3DSA:3.40.640.10 58 301 1.3E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 PANTHER PTHR11986:SF71 1 405 5.9E-272 T 22-04-2016 LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 Pfam PF00202 Aminotransferase class-III 21 396 6.0E-121 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 44.978 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LK04_RS10575 49e2a042040c47bac4e388f2107cae30 406 SUPERFAMILY SSF53383 12 397 1.63E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS14505 e27eba8ac5ac55b09438aede71463938 285 PANTHER PTHR21240:SF1 2 284 2.2E-57 T 22-04-2016 LK04_RS14505 e27eba8ac5ac55b09438aede71463938 285 PANTHER PTHR21240 2 284 2.2E-57 T 22-04-2016 LK04_RS14505 e27eba8ac5ac55b09438aede71463938 285 Gene3D G3DSA:3.20.20.140 3 274 1.1E-68 T 22-04-2016 LK04_RS14505 e27eba8ac5ac55b09438aede71463938 285 SUPERFAMILY SSF51556 3 273 6.97E-62 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS14505 e27eba8ac5ac55b09438aede71463938 285 Pfam PF04909 Amidohydrolase 3 272 4.2E-29 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LK04_RS09375 60763af4317d7706a4f9cab45c44538b 392 PIRSF PIRSF016049 1 391 9.3E-181 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 LK04_RS09375 60763af4317d7706a4f9cab45c44538b 392 Gene3D G3DSA:3.20.20.150 1 389 1.5E-150 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS09375 60763af4317d7706a4f9cab45c44538b 392 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 7.5E-156 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 LK04_RS09375 60763af4317d7706a4f9cab45c44538b 392 PANTHER PTHR30387 1 392 3.8E-172 T 22-04-2016 LK04_RS09375 60763af4317d7706a4f9cab45c44538b 392 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 392 214.739 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 LK04_RS09375 60763af4317d7706a4f9cab45c44538b 392 PANTHER PTHR30387:SF2 1 392 3.8E-172 T 22-04-2016 LK04_RS09375 60763af4317d7706a4f9cab45c44538b 392 SUPERFAMILY SSF51658 1 133 1.62E-77 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS09375 60763af4317d7706a4f9cab45c44538b 392 SUPERFAMILY SSF51658 163 383 1.62E-77 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS09375 60763af4317d7706a4f9cab45c44538b 392 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 5.3E-211 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 LK04_RS11065 8a1b3f88b974f9f2a63a3033406f7035 73 PANTHER PTHR37011 1 69 2.6E-28 T 22-04-2016 LK04_RS11065 8a1b3f88b974f9f2a63a3033406f7035 73 SUPERFAMILY SSF50182 21 70 1.47E-17 T 22-04-2016 IPR010920 LSM domain LK04_RS11065 8a1b3f88b974f9f2a63a3033406f7035 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 70 2.0E-22 T 22-04-2016 IPR010305 Protein of unknown function DUF903 LK04_RS11065 8a1b3f88b974f9f2a63a3033406f7035 73 PANTHER PTHR37011:SF2 1 69 2.6E-28 T 22-04-2016 LK04_RS11065 8a1b3f88b974f9f2a63a3033406f7035 73 Gene3D G3DSA:2.30.30.100 19 72 2.6E-26 T 22-04-2016 LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 Gene3D G3DSA:3.90.120.10 308 442 2.6E-27 T 22-04-2016 LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 PANTHER PTHR10629 20 454 4.5E-76 T 22-04-2016 LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 436 454 - T 22-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 Pfam PF00145 C-5 cytosine-specific DNA methylase 92 452 5.4E-73 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 94 454 1.8E-100 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 SUPERFAMILY SSF53335 92 455 4.8E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 PANTHER PTHR10629:SF31 20 454 4.5E-76 T 22-04-2016 LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 Gene3D G3DSA:3.40.50.150 91 295 3.0E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 93 109 2.1E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 221 235 2.1E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LK04_RS06835 dee6601c2fda122e84e84987e621a125 467 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 275 288 2.1E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 LK04_RS16870 3b7c92748a136427f0f2d758a2547c19 342 SUPERFAMILY SSF47413 2 56 4.41E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS16870 3b7c92748a136427f0f2d758a2547c19 342 PANTHER PTHR30146 3 269 1.4E-30 T 22-04-2016 LK04_RS16870 3b7c92748a136427f0f2d758a2547c19 342 Pfam PF13407 Periplasmic binding protein domain 112 320 2.3E-16 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS16870 3b7c92748a136427f0f2d758a2547c19 342 Gene3D G3DSA:3.40.50.2300 185 318 3.3E-17 T 22-04-2016 LK04_RS16870 3b7c92748a136427f0f2d758a2547c19 342 Gene3D G3DSA:3.40.50.2300 121 184 3.9E-7 T 22-04-2016 LK04_RS16870 3b7c92748a136427f0f2d758a2547c19 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 48 1.9E-11 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS16870 3b7c92748a136427f0f2d758a2547c19 342 SMART SM00354 3 77 1.5E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS16870 3b7c92748a136427f0f2d758a2547c19 342 SUPERFAMILY SSF53822 65 339 9.89E-26 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS16870 3b7c92748a136427f0f2d758a2547c19 342 PANTHER PTHR30146:SF26 3 269 1.4E-30 T 22-04-2016 LK04_RS16870 3b7c92748a136427f0f2d758a2547c19 342 Gene3D G3DSA:1.10.260.40 2 53 1.5E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS14920 781807468f8be7d173d1d8a1dc6d9ed4 382 Pfam PF02684 Lipid-A-disaccharide synthetase 8 376 1.5E-141 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 LK04_RS14920 781807468f8be7d173d1d8a1dc6d9ed4 382 SUPERFAMILY SSF53756 8 359 5.23E-28 T 22-04-2016 LK04_RS14920 781807468f8be7d173d1d8a1dc6d9ed4 382 PANTHER PTHR30372 4 382 1.5E-139 T 22-04-2016 LK04_RS14920 781807468f8be7d173d1d8a1dc6d9ed4 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 378 1.0E-171 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 LK04_RS14920 781807468f8be7d173d1d8a1dc6d9ed4 382 PANTHER PTHR30372:SF0 4 382 1.5E-139 T 22-04-2016 LK04_RS14920 781807468f8be7d173d1d8a1dc6d9ed4 382 Gene3D G3DSA:3.40.50.2000 171 354 7.4E-4 T 22-04-2016 LK04_RS14920 781807468f8be7d173d1d8a1dc6d9ed4 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 381 42.923 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 SMART SM01274 18 151 3.8E-81 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 7.4E-98 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 Gene3D G3DSA:3.40.50.10380 8 160 1.2E-51 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 PIRSF PIRSF036684 1 758 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 3.6E-18 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 SUPERFAMILY SSF53223 10 161 2.16E-53 T 22-04-2016 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 Gene3D G3DSA:3.40.50.720 161 449 2.5E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 PANTHER PTHR23406 31 446 9.8E-175 T 22-04-2016 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 Gene3D G3DSA:3.40.50.10750 570 727 1.1E-51 T 22-04-2016 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 SUPERFAMILY SSF53659 430 754 8.22E-89 T 22-04-2016 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 3.9E-28 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 SUPERFAMILY SSF51735 163 452 1.35E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS04580 234af1a06e015952c73e9bfba8789108 759 SMART SM00919 163 401 1.6E-137 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LK04_RS09195 f07956f333998718d142c1933efb5b22 167 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 135 3.4E-25 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN LK04_RS09195 f07956f333998718d142c1933efb5b22 167 PANTHER PTHR37625 1 155 9.3E-17 T 22-04-2016 LK04_RS09195 f07956f333998718d142c1933efb5b22 167 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 136 4.8E-25 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 PANTHER PTHR11751 93 115 2.2E-48 T 22-04-2016 LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 PANTHER PTHR11751 1 77 2.2E-48 T 22-04-2016 LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.8E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 SMART SM00345 15 74 1.4E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 Pfam PF07729 FCD domain 99 226 3.9E-19 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 Gene3D G3DSA:1.10.10.10 7 76 4.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 PANTHER PTHR11751:SF355 93 115 2.2E-48 T 22-04-2016 LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 PANTHER PTHR11751:SF355 1 77 2.2E-48 T 22-04-2016 LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 Gene3D G3DSA:1.20.120.530 95 238 7.7E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 SMART SM00895 99 227 3.8E-18 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 SUPERFAMILY SSF48008 95 234 3.4E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15285 223ddbbf92bd2f8f3d6d520b2dc94064 254 SUPERFAMILY SSF46785 6 76 5.82E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19155 f43dc9bbfca5b81feaca8d5b136936ab 168 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 6 163 4.6E-45 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 LK04_RS19155 f43dc9bbfca5b81feaca8d5b136936ab 168 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 6 138 2.7E-45 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 LK04_RS19155 f43dc9bbfca5b81feaca8d5b136936ab 168 SUPERFAMILY SSF52540 3 164 3.75E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19155 f43dc9bbfca5b81feaca8d5b136936ab 168 Gene3D G3DSA:3.40.50.300 2 165 9.8E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19155 f43dc9bbfca5b81feaca8d5b136936ab 168 PANTHER PTHR19136 4 139 1.5E-27 T 22-04-2016 LK04_RS19155 f43dc9bbfca5b81feaca8d5b136936ab 168 PANTHER PTHR19136:SF82 4 139 1.5E-27 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 SUPERFAMILY SSF103491 16 424 6.15E-134 T 22-04-2016 IPR023201 SecY subunit domain LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 22-04-2016 IPR030659 SecY conserved site LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 Gene3D G3DSA:1.10.3370.10 17 437 1.1E-167 T 22-04-2016 IPR023201 SecY subunit domain LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 1.0E-140 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 6.9E-99 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 6.9E-99 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 6.9E-99 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 6.9E-99 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 6.9E-99 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 6.9E-99 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 6.9E-99 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 6.9E-99 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 6.9E-99 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 Pfam PF00344 SecY translocase 76 417 4.2E-120 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PIRSF PIRSF004557 13 441 3.3E-124 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PANTHER PTHR10906 18 443 2.4E-235 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 PANTHER PTHR10906:SF2 18 443 2.4E-235 T 22-04-2016 LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 22-04-2016 IPR030659 SecY conserved site LK04_RS00970 0d05c860639f6b7ec602434447590b6b 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.914 T 22-04-2016 IPR026593 Protein translocase subunit SecY LK04_RS03690 daa8d5e568551b03da2939dadfac5361 108 SUPERFAMILY SSF69754 3 103 6.41E-34 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LK04_RS03690 daa8d5e568551b03da2939dadfac5361 108 PANTHER PTHR33231:SF3 1 103 4.2E-61 T 22-04-2016 LK04_RS03690 daa8d5e568551b03da2939dadfac5361 108 PANTHER PTHR33231 1 103 4.2E-61 T 22-04-2016 LK04_RS03690 daa8d5e568551b03da2939dadfac5361 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.0E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LK04_RS03690 daa8d5e568551b03da2939dadfac5361 108 Gene3D G3DSA:3.30.160.100 3 91 5.5E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LK04_RS03690 daa8d5e568551b03da2939dadfac5361 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.3E-22 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LK04_RS11255 cb8e247ba777acea3155ac8d809bfef7 534 PANTHER PTHR11328 1 492 1.5E-78 T 22-04-2016 LK04_RS11255 cb8e247ba777acea3155ac8d809bfef7 534 PANTHER PTHR11328:SF24 1 492 1.5E-78 T 22-04-2016 LK04_RS11255 cb8e247ba777acea3155ac8d809bfef7 534 Pfam PF13347 MFS/sugar transport protein 13 451 4.5E-58 T 22-04-2016 LK04_RS11255 cb8e247ba777acea3155ac8d809bfef7 534 SUPERFAMILY SSF103473 11 439 8.11E-34 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS11255 cb8e247ba777acea3155ac8d809bfef7 534 Gene3D G3DSA:1.20.1250.20 19 208 1.3E-16 T 22-04-2016 LK04_RS11255 cb8e247ba777acea3155ac8d809bfef7 534 Gene3D G3DSA:1.20.1250.20 249 442 3.1E-4 T 22-04-2016 LK04_RS02335 1bbd3ce0b92fdc4dba7d61b10b58077b 450 PANTHER PTHR33989 4 449 1.5E-168 T 22-04-2016 LK04_RS02335 1bbd3ce0b92fdc4dba7d61b10b58077b 450 PIRSF PIRSF006351 3 443 1.9E-139 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LK04_RS02335 1bbd3ce0b92fdc4dba7d61b10b58077b 450 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 11 434 1.7E-146 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LK04_RS02335 1bbd3ce0b92fdc4dba7d61b10b58077b 450 Pfam PF02378 Phosphotransferase system, EIIC 28 359 1.2E-57 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS02335 1bbd3ce0b92fdc4dba7d61b10b58077b 450 PANTHER PTHR33989:SF6 4 449 1.5E-168 T 22-04-2016 LK04_RS02335 1bbd3ce0b92fdc4dba7d61b10b58077b 450 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 11 434 1.7E-146 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 Pfam PF00089 Trypsin 51 261 5.1E-8 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 77 82 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 PANTHER PTHR15462 31 260 2.9E-47 T 22-04-2016 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 213 224 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 PRINTS PR00839 V8 serine protease family signature 174 187 1.1E-16 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 PRINTS PR00839 V8 serine protease family signature 41 58 1.1E-16 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 PRINTS PR00839 V8 serine protease family signature 66 83 1.1E-16 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 PRINTS PR00839 V8 serine protease family signature 228 240 1.1E-16 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 PRINTS PR00839 V8 serine protease family signature 208 224 1.1E-16 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 Gene3D G3DSA:2.40.10.10 174 242 1.2E-7 T 22-04-2016 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 Gene3D G3DSA:2.40.10.10 51 162 1.5E-10 T 22-04-2016 LK04_RS08510 d50f53cae6c632e5a85624a73b4b5f74 268 SUPERFAMILY SSF50494 30 266 3.0E-28 T 22-04-2016 IPR009003 Peptidase S1, PA clan LK04_RS04680 515c572a0a038d2e35d9852a0d3c601d 328 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 196 327 2.0E-64 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LK04_RS04680 515c572a0a038d2e35d9852a0d3c601d 328 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 323 8.1E-88 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 LK04_RS04680 515c572a0a038d2e35d9852a0d3c601d 328 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 325 28.209 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 LK04_RS04680 515c572a0a038d2e35d9852a0d3c601d 328 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 196 322 1.1E-49 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LK04_RS04680 515c572a0a038d2e35d9852a0d3c601d 328 SMART SM00771 193 323 8.2E-76 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LK04_RS04680 515c572a0a038d2e35d9852a0d3c601d 328 PANTHER PTHR38685:SF1 2 325 4.2E-76 T 22-04-2016 LK04_RS04680 515c572a0a038d2e35d9852a0d3c601d 328 PANTHER PTHR38685 2 325 4.2E-76 T 22-04-2016 LK04_RS04680 515c572a0a038d2e35d9852a0d3c601d 328 SUPERFAMILY SSF64383 194 326 6.15E-48 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LK04_RS04680 515c572a0a038d2e35d9852a0d3c601d 328 Gene3D G3DSA:3.30.1400.10 193 326 2.7E-61 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 5.3E-150 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PANTHER PTHR22912:SF160 1 459 1.1E-272 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 SUPERFAMILY SSF51905 2 337 8.03E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.4E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 Gene3D G3DSA:3.50.50.60 272 339 1.7E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 Gene3D G3DSA:3.50.50.60 6 149 1.7E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 Gene3D G3DSA:3.50.50.60 151 271 5.0E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PANTHER PTHR22912 1 459 1.1E-272 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.1E-41 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.1E-41 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.1E-41 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 3.1E-41 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 3.1E-41 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PIRSF PIRSF000350 1 468 5.4E-87 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 7.3E-70 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 7.3E-70 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 7.3E-70 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 7.3E-70 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.3E-70 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 7.3E-70 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.3E-70 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 7.3E-70 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 7.3E-70 T 22-04-2016 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 3.2E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 SUPERFAMILY SSF55424 343 466 3.09E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LK04_RS15270 fc86402c52901a7e144b140ce0f12070 474 Gene3D G3DSA:3.30.390.30 342 460 2.5E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LK04_RS13210 70e8ccfb07ff39c82dfe0b8a3a181bda 149 PANTHER PTHR33202 1 144 1.4E-44 T 22-04-2016 LK04_RS13210 70e8ccfb07ff39c82dfe0b8a3a181bda 149 Pfam PF01475 Ferric uptake regulator family 10 132 4.7E-46 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 LK04_RS13210 70e8ccfb07ff39c82dfe0b8a3a181bda 149 SUPERFAMILY SSF46785 6 136 1.28E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13210 70e8ccfb07ff39c82dfe0b8a3a181bda 149 Gene3D G3DSA:1.10.10.10 2 84 7.2E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17750 7e5996bc8d32e106716410e24176ef7c 168 PIRSF PIRSF016548 1 159 7.3E-49 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 LK04_RS17750 7e5996bc8d32e106716410e24176ef7c 168 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 41.256 T 22-04-2016 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd LK04_RS17750 7e5996bc8d32e106716410e24176ef7c 168 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 147 1.6E-53 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 LK04_RS02835 a1d2c97f811b1eeab28fa4fab730f4af 410 Pfam PF05048 Periplasmic copper-binding protein (NosD) 128 245 1.3E-5 T 22-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain LK04_RS02835 a1d2c97f811b1eeab28fa4fab730f4af 410 SUPERFAMILY SSF51126 152 313 8.28E-5 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor LK04_RS10745 d25c8ef3c5dbbc802c3bc8ebeff63b72 140 SUPERFAMILY SSF51306 18 136 3.66E-32 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LK04_RS10745 d25c8ef3c5dbbc802c3bc8ebeff63b72 140 PANTHER PTHR33516:SF1 1 140 1.7E-51 T 22-04-2016 LK04_RS10745 d25c8ef3c5dbbc802c3bc8ebeff63b72 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 1.1E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LK04_RS10745 d25c8ef3c5dbbc802c3bc8ebeff63b72 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 1.1E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LK04_RS10745 d25c8ef3c5dbbc802c3bc8ebeff63b72 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 1.1E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LK04_RS10745 d25c8ef3c5dbbc802c3bc8ebeff63b72 140 Gene3D G3DSA:2.10.109.10 25 138 7.1E-45 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LK04_RS10745 d25c8ef3c5dbbc802c3bc8ebeff63b72 140 Pfam PF00717 Peptidase S24-like 55 103 8.7E-12 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B LK04_RS10745 d25c8ef3c5dbbc802c3bc8ebeff63b72 140 PANTHER PTHR33516 1 140 1.7E-51 T 22-04-2016 LK04_RS14450 e0f5ff56485a745cf0d330f9a8774c61 331 SUPERFAMILY SSF53448 5 226 3.69E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS14450 e0f5ff56485a745cf0d330f9a8774c61 331 Gene3D G3DSA:3.90.550.10 1 200 3.3E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS14450 e0f5ff56485a745cf0d330f9a8774c61 331 Pfam PF00535 Glycosyl transferase family 2 8 157 8.2E-32 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS14450 e0f5ff56485a745cf0d330f9a8774c61 331 PANTHER PTHR22916:SF24 1 329 9.3E-50 T 22-04-2016 LK04_RS14450 e0f5ff56485a745cf0d330f9a8774c61 331 PANTHER PTHR22916 1 329 9.3E-50 T 22-04-2016 LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 Pfam PF12833 Helix-turn-helix domain 233 311 2.2E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 Gene3D G3DSA:1.10.10.60 208 264 7.9E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 SMART SM00342 227 310 1.7E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 Gene3D G3DSA:1.10.10.60 265 311 2.2E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 Pfam PF12852 Cupin 6 195 2.9E-29 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 Gene3D G3DSA:2.60.120.280 42 102 2.9E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 SUPERFAMILY SSF46689 210 261 7.69E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 PANTHER PTHR11019 37 316 3.5E-42 T 22-04-2016 LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 PANTHER PTHR11019:SF77 37 316 3.5E-42 T 22-04-2016 LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 SUPERFAMILY SSF46689 263 311 2.42E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17130 9176faa83307d4ec8d58cf45b556909d 316 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 306 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 PANTHER PTHR11390:SF27 1 37 0.0 T 22-04-2016 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 PANTHER PTHR11390:SF27 67 776 0.0 T 22-04-2016 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 SMART SM00436 133 221 5.7E-47 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 863 1.2E-22 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 4.7E-12 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 SUPERFAMILY SSF57783 809 864 5.78E-22 T 22-04-2016 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Gene3D G3DSA:2.20.25.10 808 865 7.2E-31 T 22-04-2016 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 SUPERFAMILY SSF57783 744 807 1.07E-18 T 22-04-2016 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 SMART SM00493 3 132 1.7E-28 T 22-04-2016 IPR006171 Toprim domain LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Pfam PF01131 DNA topoisomerase 157 565 1.8E-127 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 SMART SM00437 272 527 5.0E-121 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Gene3D G3DSA:1.10.460.10 164 211 9.4E-58 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Gene3D G3DSA:1.10.460.10 474 578 9.4E-58 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Gene3D G3DSA:2.70.20.10 213 334 6.8E-33 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Gene3D G3DSA:2.70.20.10 338 473 1.4E-35 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Pfam PF01751 Toprim domain 5 142 2.9E-32 T 22-04-2016 IPR006171 Toprim domain LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 8.0E-5 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 745 2.8E-11 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 SUPERFAMILY SSF56712 3 608 5.76E-204 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 PANTHER PTHR11390 1 37 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 PANTHER PTHR11390 67 776 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Gene3D G3DSA:3.30.65.10 708 743 1.1E-11 T 22-04-2016 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Gene3D G3DSA:3.30.65.10 589 628 5.2E-10 T 22-04-2016 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Gene3D G3DSA:3.30.65.10 745 806 2.1E-25 T 22-04-2016 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Gene3D G3DSA:3.40.50.140 1 163 3.8E-57 T 22-04-2016 IPR006171 Toprim domain LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 634 8.5E-258 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 54.961 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 LK04_RS08245 02dcc1830528b737d90a18f7e6f28ff5 865 SUPERFAMILY SSF57783 703 743 5.61E-7 T 22-04-2016 LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 Gene3D G3DSA:3.55.50.10 120 215 4.3E-31 T 22-04-2016 LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 Gene3D G3DSA:4.10.180.10 303 318 1.6E-5 T 22-04-2016 IPR027440 Capsid protein alpha-like domain LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 495 598 3.9E-36 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 617 763 1.5E-50 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 PANTHER PTHR32305 37 766 2.5E-116 T 22-04-2016 LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 SUPERFAMILY SSF69279 23 212 1.59E-48 T 22-04-2016 LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 33 521 5.7E-121 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 SUPERFAMILY SSF69255 387 476 1.23E-26 T 22-04-2016 LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 Gene3D G3DSA:2.40.50.230 395 476 1.1E-25 T 22-04-2016 IPR006531 Gp5 N-terminal LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 SUPERFAMILY SSF69279 212 388 1.28E-43 T 22-04-2016 LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 23 519 4.4E-76 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 Pfam PF05954 Phage late control gene D protein (GPD) 41 359 1.1E-67 T 22-04-2016 LK04_RS15765 7f5221d2275b050024ad12fed706685c 795 PANTHER PTHR32305:SF7 37 766 2.5E-116 T 22-04-2016 LK04_RS03195 c3165110ff5bd5e2c41407dee99c868e 228 SMART SM00927 59 157 1.1E-64 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 LK04_RS03195 c3165110ff5bd5e2c41407dee99c868e 228 SUPERFAMILY SSF52980 9 227 2.31E-79 T 22-04-2016 IPR011335 Restriction endonuclease type II-like LK04_RS03195 c3165110ff5bd5e2c41407dee99c868e 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 154.431 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 LK04_RS03195 c3165110ff5bd5e2c41407dee99c868e 228 Gene3D G3DSA:3.40.600.10 7 226 6.0E-81 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 LK04_RS03195 c3165110ff5bd5e2c41407dee99c868e 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 1.3E-34 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 LK04_RS03195 c3165110ff5bd5e2c41407dee99c868e 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 4.2E-110 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 Gene3D G3DSA:1.10.460.10 158 217 2.6E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 Gene3D G3DSA:1.10.460.10 490 604 2.6E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 SUPERFAMILY SSF56712 1 607 6.67E-186 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 SMART SM00437 280 558 1.1E-100 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 SMART SM00436 128 223 8.4E-36 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 2.5E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 2.5E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 2.5E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 2.5E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 2.5E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 PANTHER PTHR11390:SF21 1 503 5.0E-195 T 22-04-2016 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 PANTHER PTHR11390:SF21 521 609 5.0E-195 T 22-04-2016 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 Gene3D G3DSA:2.70.20.10 369 488 3.1E-48 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 Gene3D G3DSA:2.70.20.10 218 252 3.1E-48 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 Pfam PF01131 DNA topoisomerase 158 593 5.2E-112 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 Gene3D G3DSA:3.40.50.140 1 154 2.5E-46 T 22-04-2016 IPR006171 Toprim domain LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 PANTHER PTHR11390 1 503 5.0E-195 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 PANTHER PTHR11390 521 609 5.0E-195 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 Pfam PF01751 Toprim domain 3 135 4.1E-16 T 22-04-2016 IPR006171 Toprim domain LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 632 6.2E-273 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 SMART SM00493 1 124 1.9E-29 T 22-04-2016 IPR006171 Toprim domain LK04_RS08020 c35882f3330b67fe4ec00fdb65b1b65d 640 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 640 65.507 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.3E-22 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PANTHER PTHR11444 3 456 1.4E-239 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 Gene3D G3DSA:1.10.275.10 1 107 1.1E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 SUPERFAMILY SSF48557 3 456 6.75E-143 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 Gene3D G3DSA:1.10.40.30 375 432 6.4E-29 T 22-04-2016 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 6.0E-210 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.046 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 4.4E-68 T 22-04-2016 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 4.4E-68 T 22-04-2016 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 4.4E-68 T 22-04-2016 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 4.4E-68 T 22-04-2016 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 4.4E-68 T 22-04-2016 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 4.4E-68 T 22-04-2016 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 Pfam PF00206 Lyase 6 301 5.3E-97 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 Gene3D G3DSA:1.20.200.10 108 374 6.3E-104 T 22-04-2016 LK04_RS19675 ef023d89dccdecd9356fdc941f1dc21e 457 PANTHER PTHR11444:SF3 3 456 1.4E-239 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS01200 4f457c451fde71e1a64e8cf707509168 197 PIRSF PIRSF006305 1 190 6.6E-52 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 LK04_RS01200 4f457c451fde71e1a64e8cf707509168 197 SUPERFAMILY SSF52972 2 184 1.11E-60 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LK04_RS01200 4f457c451fde71e1a64e8cf707509168 197 Pfam PF02545 Maf-like protein 4 184 8.9E-59 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 LK04_RS01200 4f457c451fde71e1a64e8cf707509168 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 4.5E-64 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 LK04_RS01200 4f457c451fde71e1a64e8cf707509168 197 Gene3D G3DSA:3.90.950.10 2 185 6.4E-70 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LK04_RS01200 4f457c451fde71e1a64e8cf707509168 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.638 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 LK04_RS01200 4f457c451fde71e1a64e8cf707509168 197 PANTHER PTHR11746 119 182 2.4E-16 T 22-04-2016 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 Gene3D G3DSA:3.30.43.10 3 97 7.8E-10 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 SUPERFAMILY SSF56176 5 265 5.61E-61 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 PANTHER PTHR11748:SF82 237 333 1.1E-45 T 22-04-2016 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 PANTHER PTHR11748:SF82 5 186 1.1E-45 T 22-04-2016 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 Gene3D G3DSA:3.30.1370.20 430 512 3.2E-25 T 22-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 Gene3D G3DSA:3.30.70.610 372 429 8.1E-31 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 Gene3D G3DSA:3.30.70.610 264 305 8.1E-31 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 Pfam PF01565 FAD binding domain 42 158 5.3E-11 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 PANTHER PTHR11748 237 333 1.1E-45 T 22-04-2016 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 PANTHER PTHR11748 5 186 1.1E-45 T 22-04-2016 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 Gene3D G3DSA:3.30.465.10 102 262 6.0E-71 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 563 2.1E-115 T 22-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 PIRSF PIRSF000101 1 564 1.5E-222 T 22-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LK04_RS09520 110c25837c519e50d63f93a1be4bd410 564 SUPERFAMILY SSF55103 272 563 6.54E-80 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 SUPERFAMILY SSF53613 35 304 1.87E-44 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 SUPERFAMILY SSF53613 337 415 1.87E-44 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 351 364 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 Gene3D G3DSA:3.30.1110.10 44 93 2.7E-7 T 22-04-2016 LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 Gene3D G3DSA:3.40.1190.20 94 297 1.2E-45 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 Gene3D G3DSA:3.40.1190.20 336 432 1.2E-45 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 Pfam PF00294 pfkB family carbohydrate kinase 136 293 4.3E-7 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 PANTHER PTHR10584 392 433 4.3E-202 T 22-04-2016 LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 PANTHER PTHR10584 17 292 4.3E-202 T 22-04-2016 LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 PANTHER PTHR10584 331 375 4.3E-202 T 22-04-2016 LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 PANTHER PTHR10584:SF202 392 433 4.3E-202 T 22-04-2016 LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 PANTHER PTHR10584:SF202 17 292 4.3E-202 T 22-04-2016 LK04_RS13770 2478d67d75943ed7f0b5bc3fbfd98cff 433 PANTHER PTHR10584:SF202 331 375 4.3E-202 T 22-04-2016 LK04_RS10085 c5fdf8c7d05085fb0bc80de9999abcc9 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 3.3E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS10085 c5fdf8c7d05085fb0bc80de9999abcc9 328 PANTHER PTHR32196 1 326 2.2E-200 T 22-04-2016 LK04_RS10085 c5fdf8c7d05085fb0bc80de9999abcc9 328 PANTHER PTHR32196:SF23 1 326 2.2E-200 T 22-04-2016 LK04_RS08685 6b680b79b3394cd0d21dd9429651f3b2 104 SUPERFAMILY SSF54909 1 103 2.21E-34 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS08685 6b680b79b3394cd0d21dd9429651f3b2 104 PANTHER PTHR34389 1 103 7.6E-46 T 22-04-2016 LK04_RS08685 6b680b79b3394cd0d21dd9429651f3b2 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 1.8E-48 T 22-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 LK04_RS08685 6b680b79b3394cd0d21dd9429651f3b2 104 Pfam PF05336 Domain of unknown function (DUF718) 3 97 2.6E-25 T 22-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 LK04_RS08685 6b680b79b3394cd0d21dd9429651f3b2 104 PANTHER PTHR34389:SF2 1 103 7.6E-46 T 22-04-2016 LK04_RS08685 6b680b79b3394cd0d21dd9429651f3b2 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 29.103 T 22-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 Gene3D G3DSA:1.10.580.10 52 280 5.9E-96 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 6.3E-132 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 SUPERFAMILY SSF48256 4 423 2.49E-167 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 PRINTS PR00143 Citrate synthase signature 165 178 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 PRINTS PR00143 Citrate synthase signature 241 269 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 PRINTS PR00143 Citrate synthase signature 296 316 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 PRINTS PR00143 Citrate synthase signature 219 234 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 PRINTS PR00143 Citrate synthase signature 379 393 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 PRINTS PR00143 Citrate synthase signature 359 375 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 419 2.2E-239 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 PIRSF PIRSF001369 38 427 4.2E-174 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 PANTHER PTHR11739 39 423 1.6E-201 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 LK04_RS13120 5d7a8dcf211cc2d48a5eb6ac0d20dc70 427 Gene3D G3DSA:1.10.230.10 281 373 2.9E-42 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PANTHER PTHR24322 159 191 5.2E-65 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PANTHER PTHR24322 14 143 5.2E-65 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 Gene3D G3DSA:3.40.50.720 4 253 2.6E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 2.5E-58 T 22-04-2016 LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 7.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 7.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 7.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PANTHER PTHR24322:SF459 159 191 5.2E-65 T 22-04-2016 LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 PANTHER PTHR24322:SF459 14 143 5.2E-65 T 22-04-2016 LK04_RS10850 ec0b508853a8afbc68fcdd44df151a69 255 SUPERFAMILY SSF51735 4 253 4.87E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 Gene3D G3DSA:3.30.540.10 2 192 5.4E-78 T 22-04-2016 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 PIRSF PIRSF000904 1 331 3.0E-121 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 PIRSF PIRSF500210 1 330 1.8E-125 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 SUPERFAMILY SSF56655 2 326 4.09E-112 T 22-04-2016 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 41.927 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 1.0E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 1.0E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 1.0E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 1.0E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 1.0E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 1.0E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 Gene3D G3DSA:3.40.190.80 194 327 8.8E-57 T 22-04-2016 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 8.1E-81 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 LK04_RS01510 5d70c1dbc415c6033e60540b30571f68 334 PANTHER PTHR11556 1 329 3.7E-182 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 LK04_RS09590 aef077280cbd8bb8872bf98098766b75 287 Gene3D G3DSA:3.40.50.720 4 165 1.8E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09590 aef077280cbd8bb8872bf98098766b75 287 SUPERFAMILY SSF51735 7 165 7.14E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09590 aef077280cbd8bb8872bf98098766b75 287 Gene3D G3DSA:1.10.1040.10 167 286 1.4E-25 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS09590 aef077280cbd8bb8872bf98098766b75 287 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 164 5.8E-36 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LK04_RS09590 aef077280cbd8bb8872bf98098766b75 287 PIRSF PIRSF000103 1 287 2.1E-69 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 LK04_RS09590 aef077280cbd8bb8872bf98098766b75 287 SUPERFAMILY SSF48179 165 285 8.16E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS09590 aef077280cbd8bb8872bf98098766b75 287 PANTHER PTHR22981 7 287 6.5E-66 T 22-04-2016 LK04_RS09590 aef077280cbd8bb8872bf98098766b75 287 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 285 3.7E-11 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 Gene3D G3DSA:3.40.50.720 1 137 2.8E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 SUPERFAMILY SSF51735 102 298 5.67E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 3 328 1.4E-33 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 PANTHER PTHR10996:SF161 1 329 4.4E-175 T 22-04-2016 LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 SUPERFAMILY SSF52283 2 135 1.55E-44 T 22-04-2016 LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 Gene3D G3DSA:3.40.50.720 138 305 5.7E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 PANTHER PTHR10996 1 329 4.4E-175 T 22-04-2016 LK04_RS08480 2f3ae12a39ed5ce9bf96ad832278a993 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.9E-54 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS08680 896c919306999ae68bbff646b041fd0b 281 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 3 270 1.1E-124 T 22-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 LK04_RS08680 896c919306999ae68bbff646b041fd0b 281 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 2 273 53.993 T 22-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 LK04_RS08680 896c919306999ae68bbff646b041fd0b 281 SUPERFAMILY SSF53639 9 271 9.81E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS08680 896c919306999ae68bbff646b041fd0b 281 PANTHER PTHR22789:SF4 1 40 4.1E-115 T 22-04-2016 LK04_RS08680 896c919306999ae68bbff646b041fd0b 281 PANTHER PTHR22789:SF4 69 273 4.1E-115 T 22-04-2016 LK04_RS08680 896c919306999ae68bbff646b041fd0b 281 PANTHER PTHR22789 1 40 4.1E-115 T 22-04-2016 LK04_RS08680 896c919306999ae68bbff646b041fd0b 281 PANTHER PTHR22789 69 273 4.1E-115 T 22-04-2016 LK04_RS08680 896c919306999ae68bbff646b041fd0b 281 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 1.0E-35 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS08680 896c919306999ae68bbff646b041fd0b 281 Gene3D G3DSA:3.40.225.10 6 272 1.2E-95 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS08680 896c919306999ae68bbff646b041fd0b 281 SMART SM01007 12 240 1.1E-28 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS10695 70f3d70f244158f9f568cdc5b3635bbb 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 94 2.0E-38 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LK04_RS10695 70f3d70f244158f9f568cdc5b3635bbb 116 SUPERFAMILY SSF63592 1 98 4.45E-38 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LK04_RS10695 70f3d70f244158f9f568cdc5b3635bbb 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.033 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LK04_RS10695 70f3d70f244158f9f568cdc5b3635bbb 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 3.4E-40 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.2E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 281 300 2.2E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 245 262 2.2E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 2.2E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.2E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 152 174 2.2E-68 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 SUPERFAMILY SSF56935 22 371 1.49E-77 T 22-04-2016 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PANTHER PTHR34501:SF3 2 371 1.3E-208 T 22-04-2016 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 Gene3D G3DSA:2.40.160.10 22 371 3.1E-103 T 22-04-2016 IPR023614 Porin domain LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 326 342 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 8.8E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 8.8E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 8.8E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 239 251 8.8E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 326 343 8.8E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 Pfam PF00267 Gram-negative porin 27 371 4.6E-139 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS14570 6fb29ed2cd63db3d8b403d3ba8b61817 371 PANTHER PTHR34501 2 371 1.3E-208 T 22-04-2016 LK04_RS05185 428819ab270fcc6da639552ce57ee0ed 204 SMART SM00382 26 202 1.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS05185 428819ab270fcc6da639552ce57ee0ed 204 PANTHER PTHR24220:SF508 3 185 1.5E-95 T 22-04-2016 LK04_RS05185 428819ab270fcc6da639552ce57ee0ed 204 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS05185 428819ab270fcc6da639552ce57ee0ed 204 Pfam PF00005 ABC transporter 18 154 2.0E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS05185 428819ab270fcc6da639552ce57ee0ed 204 SUPERFAMILY SSF52540 2 185 1.38E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05185 428819ab270fcc6da639552ce57ee0ed 204 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 199 1.4E-81 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 LK04_RS05185 428819ab270fcc6da639552ce57ee0ed 204 Gene3D G3DSA:3.40.50.300 1 185 8.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05185 428819ab270fcc6da639552ce57ee0ed 204 PANTHER PTHR24220 3 185 1.5E-95 T 22-04-2016 LK04_RS03625 1f374da3c93952797ff52d56031d0515 534 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 20 530 1.9E-243 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 LK04_RS03625 1f374da3c93952797ff52d56031d0515 534 PANTHER PTHR38761 16 530 1.3E-274 T 22-04-2016 LK04_RS03625 1f374da3c93952797ff52d56031d0515 534 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 534 219.576 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 LK04_RS03625 1f374da3c93952797ff52d56031d0515 534 SUPERFAMILY SSF55931 18 530 7.85E-199 T 22-04-2016 LK04_RS03625 1f374da3c93952797ff52d56031d0515 534 Pfam PF04262 Glutamate-cysteine ligase 24 395 5.4E-168 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 LK04_RS10505 8bd8ead32e2b7cb550d684848fb4361e 278 Gene3D G3DSA:2.60.120.500 133 278 4.2E-76 T 22-04-2016 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 LK04_RS10505 8bd8ead32e2b7cb550d684848fb4361e 278 Gene3D G3DSA:2.60.120.520 20 132 4.8E-55 T 22-04-2016 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 LK04_RS10505 8bd8ead32e2b7cb550d684848fb4361e 278 PIRSF PIRSF006625 1 278 2.3E-135 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 LK04_RS10505 8bd8ead32e2b7cb550d684848fb4361e 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 55.607 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 LK04_RS10505 8bd8ead32e2b7cb550d684848fb4361e 278 SUPERFAMILY SSF51182 1 262 2.0E-105 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS10505 8bd8ead32e2b7cb550d684848fb4361e 278 PANTHER PTHR38461 1 278 2.3E-171 T 22-04-2016 LK04_RS10505 8bd8ead32e2b7cb550d684848fb4361e 278 Pfam PF04962 KduI/IolB family 66 273 3.1E-34 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 LK04_RS10945 9983c0a03f7752ce7b8fd994f09d1cc9 239 Pfam PF00117 Glutamine amidotransferase class-I 59 193 2.7E-18 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LK04_RS10945 9983c0a03f7752ce7b8fd994f09d1cc9 239 SUPERFAMILY SSF52317 45 224 2.81E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS10945 9983c0a03f7752ce7b8fd994f09d1cc9 239 PANTHER PTHR11922 42 192 1.3E-32 T 22-04-2016 LK04_RS10945 9983c0a03f7752ce7b8fd994f09d1cc9 239 Gene3D G3DSA:3.40.50.880 27 204 2.4E-43 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 SUPERFAMILY SSF46689 238 288 2.33E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 Gene3D G3DSA:1.10.10.60 240 289 1.0E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 PANTHER PTHR11019:SF105 44 286 9.7E-44 T 22-04-2016 LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 Gene3D G3DSA:1.10.10.60 183 239 3.1E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 Pfam PF12833 Helix-turn-helix domain 208 286 8.2E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 239 281 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 7.3E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 7.3E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 PANTHER PTHR11019 44 286 9.7E-44 T 22-04-2016 LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 SUPERFAMILY SSF46689 187 236 2.69E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS04875 cda177a2afbf620504fbb3344be004a1 291 SMART SM00342 202 285 3.7E-35 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PANTHER PTHR11014:SF54 204 279 2.7E-197 T 22-04-2016 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PANTHER PTHR11014 330 486 2.7E-197 T 22-04-2016 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 480 5.5E-178 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 Pfam PF07687 Peptidase dimerisation domain 209 288 1.2E-4 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 SUPERFAMILY SSF53187 10 182 1.23E-64 T 22-04-2016 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 SUPERFAMILY SSF53187 397 479 1.23E-64 T 22-04-2016 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 Gene3D G3DSA:3.40.630.10 397 480 4.6E-108 T 22-04-2016 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 Gene3D G3DSA:3.40.630.10 3 181 4.6E-108 T 22-04-2016 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 2.0E-99 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 2.0E-99 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 2.0E-99 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 2.0E-99 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 2.0E-99 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 2.0E-99 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 2.0E-99 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 2.0E-99 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 2.0E-99 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PANTHER PTHR11014:SF54 1 185 2.7E-197 T 22-04-2016 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PANTHER PTHR11014 1 185 2.7E-197 T 22-04-2016 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PANTHER PTHR11014 204 279 2.7E-197 T 22-04-2016 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PIRSF PIRSF016599 1 485 3.0E-205 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 Pfam PF01546 Peptidase family M20/M25/M40 72 479 3.6E-20 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS14590 8fb62bc50cf76448e3ddde0c756e70fc 486 PANTHER PTHR11014:SF54 330 486 2.7E-197 T 22-04-2016 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 183 204 1.1E-45 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 568 585 1.1E-45 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 154 171 1.1E-45 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 235 252 1.1E-45 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 119 139 1.1E-45 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 551 567 1.1E-45 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 SUPERFAMILY SSF55545 28 159 4.06E-26 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 Gene3D G3DSA:3.30.379.10 6 157 1.7E-26 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 PANTHER PTHR22600 1 421 2.8E-145 T 22-04-2016 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 PANTHER PTHR22600 539 599 2.8E-145 T 22-04-2016 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 160 586 3.8E-100 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 SUPERFAMILY SSF51445 538 602 5.27E-100 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 SUPERFAMILY SSF51445 160 421 5.27E-100 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 27 157 3.3E-15 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 Gene3D G3DSA:3.20.20.80 533 609 8.8E-135 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS16305 81a6a4f32871b803e9224806a895a5f2 794 Gene3D G3DSA:3.20.20.80 158 441 8.8E-135 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 SUPERFAMILY SSF48179 205 297 4.08E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 418 1.7E-19 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 SUPERFAMILY SSF51735 5 197 9.28E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 292 6.0E-25 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 PIRSF PIRSF500136 1 419 4.4E-146 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 SMART SM00984 323 419 8.2E-25 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 PANTHER PTHR11374:SF4 1 419 9.5E-187 T 22-04-2016 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 419 70.129 T 22-04-2016 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335|UniPathway: UPA00566 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 Gene3D G3DSA:3.40.50.720 237 418 3.3E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 415 1.4E-116 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 SUPERFAMILY SSF52413 311 418 6.41E-25 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 187 1.6E-56 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 PIRSF PIRSF000124 4 418 2.4E-73 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 Gene3D G3DSA:3.40.50.720 6 198 4.3E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 PANTHER PTHR11374 1 419 9.5E-187 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 LK04_RS18170 70ed2403ea85d425e3527b81c5b09c00 419 Gene3D G3DSA:1.20.5.100 205 232 5.6E-5 T 22-04-2016 LK04_RS08720 d68292311eabf2a400ca1c9b35d6ba63 405 Gene3D G3DSA:3.30.420.40 84 222 4.3E-32 T 22-04-2016 LK04_RS08720 d68292311eabf2a400ca1c9b35d6ba63 405 PANTHER PTHR18964:SF127 63 402 5.2E-176 T 22-04-2016 LK04_RS08720 d68292311eabf2a400ca1c9b35d6ba63 405 PANTHER PTHR18964 63 402 5.2E-176 T 22-04-2016 LK04_RS08720 d68292311eabf2a400ca1c9b35d6ba63 405 Gene3D G3DSA:1.10.10.10 12 80 1.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08720 d68292311eabf2a400ca1c9b35d6ba63 405 SUPERFAMILY SSF46785 12 77 7.08E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08720 d68292311eabf2a400ca1c9b35d6ba63 405 SUPERFAMILY SSF53067 86 391 2.69E-44 T 22-04-2016 LK04_RS08720 d68292311eabf2a400ca1c9b35d6ba63 405 Pfam PF00480 ROK family 88 391 1.5E-55 T 22-04-2016 IPR000600 ROK family LK04_RS08720 d68292311eabf2a400ca1c9b35d6ba63 405 Gene3D G3DSA:3.30.420.40 223 373 3.4E-44 T 22-04-2016 LK04_RS07810 77a2ba8c8c372b303c7e18ffaedbdca7 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 2.2E-77 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 LK04_RS07810 77a2ba8c8c372b303c7e18ffaedbdca7 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 2.6E-126 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 LK04_RS07810 77a2ba8c8c372b303c7e18ffaedbdca7 266 PANTHER PTHR32502 1 266 3.6E-173 T 22-04-2016 LK04_RS07810 77a2ba8c8c372b303c7e18ffaedbdca7 266 PANTHER PTHR32502:SF4 1 266 3.6E-173 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 LK04_RS10520 b089708064071920c3ec617d8d356942 463 PANTHER PTHR11958:SF5 1 456 1.1E-256 T 22-04-2016 LK04_RS10520 b089708064071920c3ec617d8d356942 463 Gene3D G3DSA:1.10.3860.10 26 448 3.7E-99 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS10520 b089708064071920c3ec617d8d356942 463 SUPERFAMILY SSF118215 29 443 4.32E-96 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS10520 b089708064071920c3ec617d8d356942 463 PANTHER PTHR11958 1 456 1.1E-256 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS10520 b089708064071920c3ec617d8d356942 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 2.2E-24 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS10520 b089708064071920c3ec617d8d356942 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.2E-24 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS10520 b089708064071920c3ec617d8d356942 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.2E-24 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS10520 b089708064071920c3ec617d8d356942 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.2E-24 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS10520 b089708064071920c3ec617d8d356942 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 2.2E-24 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS10520 b089708064071920c3ec617d8d356942 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 2.2E-24 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS10520 b089708064071920c3ec617d8d356942 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 443 1.8E-102 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 PANTHER PTHR30579 1 296 5.7E-157 T 22-04-2016 LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 SUPERFAMILY SSF53850 92 289 1.14E-21 T 22-04-2016 LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 SUPERFAMILY SSF46785 4 111 4.14E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.19362E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.19362E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.19362E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 Pfam PF03466 LysR substrate binding domain 93 288 2.0E-16 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 57.496 T 22-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 Gene3D G3DSA:1.10.10.10 1 73 4.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 Gene3D G3DSA:3.40.190.10 92 196 3.7E-41 T 22-04-2016 LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 PANTHER PTHR30579:SF2 1 296 5.7E-157 T 22-04-2016 LK04_RS02920 2f2be1f8e2f5073d39b12f5b73144e8a 301 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 1.0E-111 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP LK04_RS18545 a4657aad1245252738653f7f0d78da58 459 PANTHER PTHR32328:SF0 1 450 5.6E-232 T 22-04-2016 LK04_RS18545 a4657aad1245252738653f7f0d78da58 459 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 6 457 3.7E-186 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 LK04_RS18545 a4657aad1245252738653f7f0d78da58 459 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 459 245.195 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 LK04_RS18545 a4657aad1245252738653f7f0d78da58 459 Gene3D G3DSA:3.40.640.10 129 314 2.5E-34 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS18545 a4657aad1245252738653f7f0d78da58 459 SUPERFAMILY SSF53383 71 341 5.23E-46 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS18545 a4657aad1245252738653f7f0d78da58 459 PANTHER PTHR32328 1 450 5.6E-232 T 22-04-2016 LK04_RS18545 a4657aad1245252738653f7f0d78da58 459 Pfam PF12390 Selenocysteine synthase N terminal 7 44 7.4E-5 T 22-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 LK04_RS18545 a4657aad1245252738653f7f0d78da58 459 Pfam PF03841 L-seryl-tRNA selenium transferase 79 447 1.1E-171 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 LK04_RS17765 a0db28a904b24b8bab287b00fe8fa832 484 Pfam PF00155 Aminotransferase class I and II 105 449 2.8E-31 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS17765 a0db28a904b24b8bab287b00fe8fa832 484 Gene3D G3DSA:3.40.640.10 134 349 4.8E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS17765 a0db28a904b24b8bab287b00fe8fa832 484 Gene3D G3DSA:3.90.1150.10 350 467 8.6E-7 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS17765 a0db28a904b24b8bab287b00fe8fa832 484 SUPERFAMILY SSF46785 1 70 4.35E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17765 a0db28a904b24b8bab287b00fe8fa832 484 SUPERFAMILY SSF53383 81 467 2.89E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS17765 a0db28a904b24b8bab287b00fe8fa832 484 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 7.8E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS17765 a0db28a904b24b8bab287b00fe8fa832 484 SMART SM00345 7 66 3.9E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS17765 a0db28a904b24b8bab287b00fe8fa832 484 PANTHER PTHR11751 81 469 3.0E-187 T 22-04-2016 LK04_RS17765 a0db28a904b24b8bab287b00fe8fa832 484 Gene3D G3DSA:1.10.10.10 1 68 1.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17765 a0db28a904b24b8bab287b00fe8fa832 484 PANTHER PTHR11751:SF275 81 469 3.0E-187 T 22-04-2016 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 SMART SM00065 17 164 3.5E-27 T 22-04-2016 IPR003018 GAF domain GO:0005515 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 173 731 7.9E-130 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 Pfam PF01590 GAF domain 18 151 1.7E-16 T 22-04-2016 IPR003018 GAF domain GO:0005515 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 SUPERFAMILY SSF47831 203 309 5.1E-25 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 SUPERFAMILY SSF52009 293 411 4.97E-25 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 SUPERFAMILY SSF51621 421 714 2.88E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 422 707 1.6E-105 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 Gene3D G3DSA:3.20.20.60 421 736 5.0E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 Gene3D G3DSA:3.50.30.10 301 416 3.8E-30 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.9E-25 T 22-04-2016 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.9E-25 T 22-04-2016 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 2.9E-25 T 22-04-2016 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.9E-25 T 22-04-2016 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 Gene3D G3DSA:3.30.450.40 1 159 9.2E-49 T 22-04-2016 IPR029016 GAF domain-like LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 Gene3D G3DSA:1.10.274.10 199 300 9.0E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 PANTHER PTHR22931 1 716 0.0 T 22-04-2016 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 5.5E-16 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 SUPERFAMILY SSF55781 2 159 6.76E-32 T 22-04-2016 IPR029016 GAF domain-like LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 PANTHER PTHR22931:SF23 1 716 0.0 T 22-04-2016 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 294 8.1E-24 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LK04_RS03205 7541ca855658e2fd44e982f2ac435b3d 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LK04_RS02435 83625f9d9640f648ca65d7186da86419 309 SUPERFAMILY SSF53822 23 303 2.06E-81 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS02435 83625f9d9640f648ca65d7186da86419 309 PANTHER PTHR32196:SF9 19 300 8.6E-52 T 22-04-2016 LK04_RS02435 83625f9d9640f648ca65d7186da86419 309 Gene3D G3DSA:3.40.50.2300 24 141 2.6E-31 T 22-04-2016 LK04_RS02435 83625f9d9640f648ca65d7186da86419 309 PANTHER PTHR32196 19 300 8.6E-52 T 22-04-2016 LK04_RS02435 83625f9d9640f648ca65d7186da86419 309 Pfam PF13407 Periplasmic binding protein domain 27 283 3.6E-59 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS02435 83625f9d9640f648ca65d7186da86419 309 Gene3D G3DSA:3.40.50.2300 142 303 1.5E-52 T 22-04-2016 LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 Pfam PF00501 AMP-binding enzyme 35 438 6.3E-75 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 Gene3D G3DSA:2.30.38.10 357 431 2.7E-21 T 22-04-2016 LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 528 1.3E-253 T 22-04-2016 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 PANTHER PTHR24095:SF123 7 534 1.0E-248 T 22-04-2016 LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 SUPERFAMILY SSF56801 5 534 2.62E-123 T 22-04-2016 LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 22-04-2016 IPR020845 AMP-binding, conserved site LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 Gene3D G3DSA:3.40.50.980 193 350 9.3E-31 T 22-04-2016 LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 Gene3D G3DSA:3.40.50.980 34 192 4.2E-27 T 22-04-2016 LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 447 521 1.9E-12 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 Gene3D G3DSA:3.30.300.30 433 535 6.8E-27 T 22-04-2016 LK04_RS16520 b7a796404c2ea3967a38c0cdfefffe2b 538 PANTHER PTHR24095 7 534 1.0E-248 T 22-04-2016 LK04_RS15405 2408c6f210013a8c4e898163fb5a7dbf 352 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 351 35.189 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15405 2408c6f210013a8c4e898163fb5a7dbf 352 SUPERFAMILY SSF53756 4 351 2.22E-130 T 22-04-2016 LK04_RS15405 2408c6f210013a8c4e898163fb5a7dbf 352 PANTHER PTHR21015:SF22 1 352 2.4E-132 T 22-04-2016 LK04_RS15405 2408c6f210013a8c4e898163fb5a7dbf 352 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 325 8.1E-37 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15405 2408c6f210013a8c4e898163fb5a7dbf 352 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 346 4.1E-114 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15405 2408c6f210013a8c4e898163fb5a7dbf 352 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 7 143 5.4E-49 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15405 2408c6f210013a8c4e898163fb5a7dbf 352 Gene3D G3DSA:3.40.50.2000 2 194 1.0E-75 T 22-04-2016 LK04_RS15405 2408c6f210013a8c4e898163fb5a7dbf 352 Gene3D G3DSA:3.40.50.2000 252 334 4.9E-5 T 22-04-2016 LK04_RS15405 2408c6f210013a8c4e898163fb5a7dbf 352 PANTHER PTHR21015 1 352 2.4E-132 T 22-04-2016 LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 Gene3D G3DSA:3.40.50.300 6 232 2.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 PANTHER PTHR24220 11 385 7.5E-236 T 22-04-2016 LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 SMART SM00382 34 222 6.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 SMART SM00382 285 479 0.35 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 PANTHER PTHR24220:SF440 11 385 7.5E-236 T 22-04-2016 LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 SUPERFAMILY SSF52540 9 232 1.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 Pfam PF00005 ABC transporter 278 430 3.2E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 Pfam PF00005 ABC transporter 25 174 5.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 SUPERFAMILY SSF52540 270 489 8.4E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 Gene3D G3DSA:3.40.50.300 262 490 1.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10095 66c1abc3ab84d026af3846b60c03f37f 506 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS11040 f81456c0012572c043aa9fc901a16309 315 Pfam PF04198 Putative sugar-binding domain 64 314 1.2E-59 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 LK04_RS11040 f81456c0012572c043aa9fc901a16309 315 PANTHER PTHR34294 6 315 7.0E-72 T 22-04-2016 LK04_RS11040 f81456c0012572c043aa9fc901a16309 315 Gene3D G3DSA:3.40.50.1360 58 313 2.4E-74 T 22-04-2016 LK04_RS11040 f81456c0012572c043aa9fc901a16309 315 SUPERFAMILY SSF100950 63 313 2.72E-64 T 22-04-2016 LK04_RS11040 f81456c0012572c043aa9fc901a16309 315 SUPERFAMILY SSF46689 9 71 2.24E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS11040 f81456c0012572c043aa9fc901a16309 315 Gene3D G3DSA:1.10.10.10 14 54 8.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03110 0008d95e29b78165c28637e627c18a52 151 Gene3D G3DSA:3.40.630.30 11 129 1.7E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS03110 0008d95e29b78165c28637e627c18a52 151 Pfam PF00583 Acetyltransferase (GNAT) family 56 129 2.5E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS03110 0008d95e29b78165c28637e627c18a52 151 SUPERFAMILY SSF55729 11 133 2.74E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS13425 a5ce67cbc87d69e69498cc2d5668ca2d 320 PANTHER PTHR30450:SF2 52 297 1.1E-94 T 22-04-2016 LK04_RS13425 a5ce67cbc87d69e69498cc2d5668ca2d 320 PANTHER PTHR30450 52 297 1.1E-94 T 22-04-2016 LK04_RS13425 a5ce67cbc87d69e69498cc2d5668ca2d 320 Gene3D G3DSA:1.10.3720.10 63 288 4.2E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS13425 a5ce67cbc87d69e69498cc2d5668ca2d 320 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 70 132 3.4E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS13425 a5ce67cbc87d69e69498cc2d5668ca2d 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 284 3.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS13425 a5ce67cbc87d69e69498cc2d5668ca2d 320 SUPERFAMILY SSF161098 68 274 4.45E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS11295 5063d4765602959131386dd42cca080d 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site LK04_RS11295 5063d4765602959131386dd42cca080d 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 9.5E-40 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal LK04_RS11295 5063d4765602959131386dd42cca080d 413 SUPERFAMILY SSF53901 215 412 6.12E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11295 5063d4765602959131386dd42cca080d 413 PIRSF PIRSF000447 1 413 1.3E-199 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 LK04_RS11295 5063d4765602959131386dd42cca080d 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.9E-60 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal LK04_RS11295 5063d4765602959131386dd42cca080d 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 3.5E-194 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 LK04_RS11295 5063d4765602959131386dd42cca080d 413 SMART SM00825 Beta-ketoacyl synthase 6 413 6.1E-14 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LK04_RS11295 5063d4765602959131386dd42cca080d 413 PANTHER PTHR11712 3 412 4.3E-209 T 22-04-2016 LK04_RS11295 5063d4765602959131386dd42cca080d 413 SUPERFAMILY SSF53901 4 252 3.09E-75 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11295 5063d4765602959131386dd42cca080d 413 Gene3D G3DSA:3.40.47.10 263 412 8.3E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11295 5063d4765602959131386dd42cca080d 413 Gene3D G3DSA:3.40.47.10 2 260 9.1E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS18145 6cda23cb39614d7eece383ab03a52679 417 PANTHER PTHR30250:SF9 3 417 5.3E-147 T 22-04-2016 LK04_RS18145 6cda23cb39614d7eece383ab03a52679 417 Hamap MF_02024 Lipid III flippase [wzxE]. 1 417 39.587 T 22-04-2016 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 UniPathway: UPA00566 LK04_RS18145 6cda23cb39614d7eece383ab03a52679 417 Pfam PF13440 Polysaccharide biosynthesis protein 79 331 8.6E-9 T 22-04-2016 LK04_RS18145 6cda23cb39614d7eece383ab03a52679 417 PANTHER PTHR30250 3 417 5.3E-147 T 22-04-2016 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 PANTHER PTHR11644:SF15 18 296 2.0E-132 T 22-04-2016 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 290 1.4E-83 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 SUPERFAMILY SSF53927 152 293 8.28E-39 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 Gene3D G3DSA:3.40.140.10 187 292 1.2E-23 T 22-04-2016 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 Gene3D G3DSA:3.40.140.10 33 176 2.6E-41 T 22-04-2016 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 47.093 T 22-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 PIRSF PIRSF006334 14 296 1.2E-102 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 2.2E-43 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 PANTHER PTHR11644 18 296 2.0E-132 T 22-04-2016 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 65 140 3.2E-11 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LK04_RS05870 398b83064a6f7ac9d6034ac5a2994856 298 SUPERFAMILY SSF53927 1 146 2.84E-37 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PANTHER PTHR24093:SF319 102 828 0.0 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 ProSitePatterns PS01229 Hypothetical cof family signature 2. 717 739 - T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 522 528 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 Gene3D G3DSA:3.40.50.1000 645 784 1.6E-55 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 Gene3D G3DSA:3.40.50.1000 493 534 1.6E-55 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 Pfam PF00122 E1-E2 ATPase 289 510 3.6E-62 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 251 826 1.2E-184 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 SUPERFAMILY SSF55008 95 166 7.59E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 SUPERFAMILY SSF81665 288 322 2.09E-9 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 SUPERFAMILY SSF81665 419 514 2.09E-9 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 SUPERFAMILY SSF81665 766 775 2.09E-9 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 290 794 1.3E-90 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 Gene3D G3DSA:3.40.1110.10 535 644 1.9E-21 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 Pfam PF00403 Heavy-metal-associated domain 104 158 6.8E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 Pfam PF00403 Heavy-metal-associated domain 8 62 4.2E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 232 826 1.4E-188 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PRINTS PR00941 Cadmium-transporting ATPase signature 403 417 8.6E-7 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PRINTS PR00941 Cadmium-transporting ATPase signature 113 134 8.6E-7 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PRINTS PR00941 Cadmium-transporting ATPase signature 102 111 8.6E-7 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PRINTS PR00941 Cadmium-transporting ATPase signature 384 400 8.6E-7 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 SUPERFAMILY SSF81653 321 418 3.66E-25 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 Gene3D G3DSA:3.30.70.100 101 165 6.2E-21 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 Gene3D G3DSA:3.30.70.100 4 67 4.6E-16 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 Gene3D G3DSA:2.70.150.10 264 419 1.5E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 SUPERFAMILY SSF55008 3 70 9.16E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 674 1.9E-26 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 368 382 1.9E-26 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 736 1.9E-26 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 534 1.9E-26 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 653 1.9E-26 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 740 752 1.9E-26 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 PANTHER PTHR24093 102 828 0.0 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 Pfam PF00702 haloacid dehalogenase-like hydrolase 516 731 2.9E-50 T 22-04-2016 LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 SUPERFAMILY SSF56784 575 823 5.96E-60 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 SUPERFAMILY SSF56784 518 538 5.96E-60 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13730 4872de7a14693bf8de702ddbb4e53d11 834 ProSitePatterns PS01047 Heavy-metal-associated domain. 104 133 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 2.4E-246 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 6.6E-36 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.331 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 Pfam PF00682 HMGL-like 4 273 8.7E-103 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 SUPERFAMILY SSF110921 392 499 6.41E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 Gene3D G3DSA:3.20.20.70 1 347 4.0E-141 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 SUPERFAMILY SSF51569 1 290 4.21E-98 T 22-04-2016 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 PANTHER PTHR10277:SF9 1 508 1.8E-253 T 22-04-2016 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 PANTHER PTHR10277 1 508 1.8E-253 T 22-04-2016 LK04_RS15470 3779e7cfab4fa7fcfdb2ec7e34ca09cf 520 SMART SM00917 369 500 5.0E-39 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 260 449 2.3E-59 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 258 455 31.388 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 Gene3D G3DSA:3.20.20.70 262 448 3.4E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 53 71 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 SUPERFAMILY SSF51366 260 453 5.81E-58 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 6 257 35.418 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 SUPERFAMILY SSF51366 6 254 9.42E-83 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 Pfam PF00218 Indole-3-glycerol phosphate synthase 8 254 8.2E-97 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 PANTHER PTHR22854 6 285 1.2E-139 T 22-04-2016 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 Gene3D G3DSA:3.20.20.70 6 261 9.5E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS08185 e2b10ba22b67883017841cb144baf010 455 PANTHER PTHR22854:SF2 6 285 1.2E-139 T 22-04-2016 LK04_RS07355 59de46ecdae19976aedfafe885db51e3 379 Pfam PF00155 Aminotransferase class I and II 34 371 1.7E-26 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS07355 59de46ecdae19976aedfafe885db51e3 379 PANTHER PTHR11751:SF21 4 376 1.8E-109 T 22-04-2016 LK04_RS07355 59de46ecdae19976aedfafe885db51e3 379 PANTHER PTHR11751 4 376 1.8E-109 T 22-04-2016 LK04_RS07355 59de46ecdae19976aedfafe885db51e3 379 SUPERFAMILY SSF53383 1 376 1.0E-87 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS07355 59de46ecdae19976aedfafe885db51e3 379 Gene3D G3DSA:3.90.1150.10 248 376 3.1E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS07355 59de46ecdae19976aedfafe885db51e3 379 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 375 2.2E-126 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 LK04_RS07355 59de46ecdae19976aedfafe885db51e3 379 Gene3D G3DSA:3.40.640.10 40 247 5.0E-45 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS03800 34c29cbed7aff6d88615f55e58977dc3 400 PANTHER PTHR30177 104 388 1.2E-138 T 22-04-2016 LK04_RS03800 34c29cbed7aff6d88615f55e58977dc3 400 PANTHER PTHR30177:SF2 104 388 1.2E-138 T 22-04-2016 LK04_RS03800 34c29cbed7aff6d88615f55e58977dc3 400 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 207 364 1.6E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03800 34c29cbed7aff6d88615f55e58977dc3 400 Gene3D G3DSA:1.10.3720.10 185 369 7.8E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03800 34c29cbed7aff6d88615f55e58977dc3 400 SUPERFAMILY SSF161098 186 368 3.53E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18890 d9f3ce1e4ba316ffd4e1d74487891315 426 PANTHER PTHR11662:SF3 9 411 5.2E-118 T 22-04-2016 LK04_RS18890 d9f3ce1e4ba316ffd4e1d74487891315 426 Pfam PF07690 Major Facilitator Superfamily 18 375 2.4E-56 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS18890 d9f3ce1e4ba316ffd4e1d74487891315 426 Gene3D G3DSA:1.20.1250.20 225 416 8.3E-33 T 22-04-2016 LK04_RS18890 d9f3ce1e4ba316ffd4e1d74487891315 426 SUPERFAMILY SSF103473 7 414 7.19E-88 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS18890 d9f3ce1e4ba316ffd4e1d74487891315 426 Gene3D G3DSA:1.20.1250.20 10 204 3.2E-43 T 22-04-2016 LK04_RS18890 d9f3ce1e4ba316ffd4e1d74487891315 426 PANTHER PTHR11662 9 411 5.2E-118 T 22-04-2016 LK04_RS18890 d9f3ce1e4ba316ffd4e1d74487891315 426 PIRSF PIRSF002808 2 424 1.6E-33 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 Gene3D G3DSA:1.10.287.130 325 383 2.3E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 Pfam PF00989 PAS fold 222 319 7.7E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 SUPERFAMILY SSF103190 49 178 5.1E-37 T 22-04-2016 IPR029151 Periplasmic sensor domain-like LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 PANTHER PTHR24423 23 167 6.2E-153 T 22-04-2016 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 PANTHER PTHR24423 200 533 6.2E-153 T 22-04-2016 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 531 9.5E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 SUPERFAMILY SSF55890 333 400 7.72E-15 T 22-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 PANTHER PTHR24423:SF375 23 167 6.2E-153 T 22-04-2016 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 PANTHER PTHR24423:SF375 200 533 6.2E-153 T 22-04-2016 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 5.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 5.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 493 5.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 479 5.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 Gene3D G3DSA:3.30.565.10 430 531 1.4E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 Pfam PF17203 Single cache domain 3 48 179 7.2E-18 T 22-04-2016 IPR033463 Single cache domain 3 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 Gene3D G3DSA:3.30.450.20 222 324 8.0E-10 T 22-04-2016 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 327 383 5.0E-13 T 22-04-2016 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 SMART SM00387 426 534 2.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 SUPERFAMILY SSF55874 429 531 4.71E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 Gene3D G3DSA:3.30.450.20 41 179 4.5E-47 T 22-04-2016 LK04_RS10905 a8a3f000102fce5ed1992b0e5525e6ab 539 SUPERFAMILY SSF55785 221 318 2.36E-6 T 22-04-2016 IPR000014 PAS domain LK04_RS03890 9bfe8adce68e66a08060163e89f0c4cb 522 SUPERFAMILY SSF53850 22 516 2.86E-100 T 22-04-2016 LK04_RS03890 9bfe8adce68e66a08060163e89f0c4cb 522 PANTHER PTHR30290 10 518 2.2E-86 T 22-04-2016 LK04_RS03890 9bfe8adce68e66a08060163e89f0c4cb 522 Gene3D G3DSA:3.90.76.10 37 207 3.0E-28 T 22-04-2016 LK04_RS03890 9bfe8adce68e66a08060163e89f0c4cb 522 Gene3D G3DSA:3.10.105.10 281 489 1.3E-39 T 22-04-2016 LK04_RS03890 9bfe8adce68e66a08060163e89f0c4cb 522 PIRSF PIRSF002741 5 519 1.1E-66 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS03890 9bfe8adce68e66a08060163e89f0c4cb 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 437 8.5E-68 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 Pfam PF13432 Tetratricopeptide repeat 275 329 7.4E-7 T 22-04-2016 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 Gene3D G3DSA:1.25.40.10 686 803 6.2E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 Gene3D G3DSA:1.25.40.10 562 623 3.5E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 Gene3D G3DSA:1.25.40.10 461 518 3.5E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 SUPERFAMILY SSF48452 37 201 3.04E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 SMART SM00028 36 69 72.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 SMART SM00028 777 810 280.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 SMART SM00028 299 332 0.52 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 SMART SM00028 380 413 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 SMART SM00028 265 298 91.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 Gene3D G3DSA:1.25.40.10 272 435 5.4E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 Gene3D G3DSA:1.25.40.10 37 172 5.4E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 915 1265 7.0E-137 T 22-04-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 UniPathway: UPA00694 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 SUPERFAMILY SSF48452 472 517 5.9E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 SUPERFAMILY SSF48452 270 416 5.9E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 Pfam PF14559 Tetratricopeptide repeat 466 528 7.8E-6 T 22-04-2016 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PRINTS PR01441 Cellulose synthase subunit C signature 184 201 3.5E-28 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PRINTS PR01441 Cellulose synthase subunit C signature 1170 1191 3.5E-28 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PRINTS PR01441 Cellulose synthase subunit C signature 488 508 3.5E-28 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PRINTS PR01441 Cellulose synthase subunit C signature 154 166 3.5E-28 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PRINTS PR01441 Cellulose synthase subunit C signature 403 423 3.5E-28 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PRINTS PR01441 Cellulose synthase subunit C signature 1130 1154 3.5E-28 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PRINTS PR01441 Cellulose synthase subunit C signature 44 64 3.5E-28 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PANTHER PTHR23083 463 493 6.5E-14 T 22-04-2016 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PANTHER PTHR23083 121 128 6.5E-14 T 22-04-2016 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PANTHER PTHR23083 275 329 6.5E-14 T 22-04-2016 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PANTHER PTHR23083 682 730 6.5E-14 T 22-04-2016 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PANTHER PTHR23083 377 433 6.5E-14 T 22-04-2016 LK04_RS18305 d258355d7753b94666467ada9b3041b1 1268 PANTHER PTHR23083 36 105 6.5E-14 T 22-04-2016 LK04_RS10910 c2a8eb4b634bf7916251e02f5832aedb 239 PANTHER PTHR26402:SF522 2 188 2.4E-63 T 22-04-2016 LK04_RS10910 c2a8eb4b634bf7916251e02f5832aedb 239 SUPERFAMILY SSF52172 1 186 6.12E-31 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS10910 c2a8eb4b634bf7916251e02f5832aedb 239 Pfam PF00072 Response regulator receiver domain 4 117 5.9E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS10910 c2a8eb4b634bf7916251e02f5832aedb 239 SMART SM00448 2 117 6.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS10910 c2a8eb4b634bf7916251e02f5832aedb 239 PANTHER PTHR26402 2 188 2.4E-63 T 22-04-2016 LK04_RS10910 c2a8eb4b634bf7916251e02f5832aedb 239 PIRSF PIRSF006171 1 230 2.2E-80 T 22-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 LK04_RS10910 c2a8eb4b634bf7916251e02f5832aedb 239 Gene3D G3DSA:3.40.50.2300 2 131 9.0E-27 T 22-04-2016 LK04_RS10910 c2a8eb4b634bf7916251e02f5832aedb 239 Gene3D G3DSA:1.10.10.60 160 192 1.3E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS15780 bfbe227f10028c5668a5d0139ff4f4c8 565 PANTHER PTHR30128:SF11 1 546 5.2E-72 T 22-04-2016 LK04_RS15780 bfbe227f10028c5668a5d0139ff4f4c8 565 SUPERFAMILY SSF103088 410 537 3.4E-30 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS15780 bfbe227f10028c5668a5d0139ff4f4c8 565 PANTHER PTHR30128 1 546 5.2E-72 T 22-04-2016 LK04_RS15780 bfbe227f10028c5668a5d0139ff4f4c8 565 Pfam PF00691 OmpA family 436 532 1.7E-16 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS15780 bfbe227f10028c5668a5d0139ff4f4c8 565 Gene3D G3DSA:3.30.1330.60 425 540 4.8E-32 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS15780 bfbe227f10028c5668a5d0139ff4f4c8 565 PRINTS PR01021 OMPA domain signature 437 459 9.8E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS15780 bfbe227f10028c5668a5d0139ff4f4c8 565 PRINTS PR01021 OMPA domain signature 467 482 9.8E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS15780 bfbe227f10028c5668a5d0139ff4f4c8 565 PRINTS PR01021 OMPA domain signature 482 498 9.8E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 289 1.5E-79 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00690 Adhesin family signature 54 67 7.4E-26 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00690 Adhesin family signature 257 276 7.4E-26 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00690 Adhesin family signature 23 41 7.4E-26 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00690 Adhesin family signature 178 199 7.4E-26 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00690 Adhesin family signature 231 249 7.4E-26 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00690 Adhesin family signature 67 84 7.4E-26 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 SUPERFAMILY SSF53807 21 292 7.36E-86 T 22-04-2016 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00691 Adhesin B signature 227 244 3.0E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00691 Adhesin B signature 178 195 3.0E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00691 Adhesin B signature 67 86 3.0E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00691 Adhesin B signature 23 44 3.0E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00691 Adhesin B signature 48 66 3.0E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PRINTS PR00691 Adhesin B signature 270 288 3.0E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 Gene3D G3DSA:3.40.50.1980 171 292 5.3E-44 T 22-04-2016 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PANTHER PTHR30477:SF16 8 291 1.4E-80 T 22-04-2016 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 PANTHER PTHR30477 8 291 1.4E-80 T 22-04-2016 LK04_RS13855 0387f2e6ebcfb96faeffcdb458215120 292 Gene3D G3DSA:3.40.50.1980 17 170 1.4E-49 T 22-04-2016 LK04_RS03180 6204ee217423575ab3df2885385a2f4d 346 PANTHER PTHR11732 1 139 2.9E-208 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS03180 6204ee217423575ab3df2885385a2f4d 346 PANTHER PTHR11732 157 346 2.9E-208 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS03180 6204ee217423575ab3df2885385a2f4d 346 Gene3D G3DSA:3.20.20.100 1 344 7.0E-108 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS03180 6204ee217423575ab3df2885385a2f4d 346 PANTHER PTHR11732:SF112 1 139 2.9E-208 T 22-04-2016 LK04_RS03180 6204ee217423575ab3df2885385a2f4d 346 PANTHER PTHR11732:SF112 157 346 2.9E-208 T 22-04-2016 LK04_RS03180 6204ee217423575ab3df2885385a2f4d 346 Pfam PF00248 Aldo/keto reductase family 16 337 9.8E-75 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS03180 6204ee217423575ab3df2885385a2f4d 346 SUPERFAMILY SSF51430 1 345 1.31E-107 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS07770 22ae1f74bdea72c1847c4ce5d37a4984 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 4.5E-44 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal LK04_RS07770 22ae1f74bdea72c1847c4ce5d37a4984 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 2.6E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS07770 22ae1f74bdea72c1847c4ce5d37a4984 263 SMART SM00346 13 102 4.8E-34 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS07770 22ae1f74bdea72c1847c4ce5d37a4984 263 Gene3D G3DSA:1.10.10.10 12 85 5.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07770 22ae1f74bdea72c1847c4ce5d37a4984 263 Gene3D G3DSA:3.30.450.40 86 261 2.5E-66 T 22-04-2016 IPR029016 GAF domain-like LK04_RS07770 22ae1f74bdea72c1847c4ce5d37a4984 263 PANTHER PTHR30136 5 263 1.6E-122 T 22-04-2016 LK04_RS07770 22ae1f74bdea72c1847c4ce5d37a4984 263 SUPERFAMILY SSF55781 77 259 7.19E-53 T 22-04-2016 IPR029016 GAF domain-like LK04_RS07770 22ae1f74bdea72c1847c4ce5d37a4984 263 PANTHER PTHR30136:SF7 5 263 1.6E-122 T 22-04-2016 LK04_RS07770 22ae1f74bdea72c1847c4ce5d37a4984 263 SUPERFAMILY SSF46785 13 86 2.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14060 979c4290b56593aee0a6a3acafcb0ddf 203 PANTHER PTHR11019:SF4 5 196 3.2E-70 T 22-04-2016 LK04_RS14060 979c4290b56593aee0a6a3acafcb0ddf 203 PANTHER PTHR11019 5 196 3.2E-70 T 22-04-2016 LK04_RS14060 979c4290b56593aee0a6a3acafcb0ddf 203 Gene3D G3DSA:3.40.50.880 6 190 9.9E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS14060 979c4290b56593aee0a6a3acafcb0ddf 203 Pfam PF01965 DJ-1/PfpI family 6 172 1.6E-46 T 22-04-2016 IPR002818 DJ-1/PfpI LK04_RS14060 979c4290b56593aee0a6a3acafcb0ddf 203 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 7 185 1.1E-59 T 22-04-2016 IPR006287 DJ-1 LK04_RS14060 979c4290b56593aee0a6a3acafcb0ddf 203 SUPERFAMILY SSF52317 6 189 4.42E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS08860 db3cc3bb0d3c0af3bc6ccfa8066e505d 99 SUPERFAMILY SSF54909 3 90 4.22E-24 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS08860 db3cc3bb0d3c0af3bc6ccfa8066e505d 99 PANTHER PTHR33336 1 98 2.8E-18 T 22-04-2016 LK04_RS08860 db3cc3bb0d3c0af3bc6ccfa8066e505d 99 Gene3D G3DSA:3.30.70.900 4 95 9.6E-27 T 22-04-2016 LK04_RS08860 db3cc3bb0d3c0af3bc6ccfa8066e505d 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 72 6.2E-15 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain LK04_RS06455 969d344e532d63b8350cd4f097ca325e 136 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 128 2.5E-50 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system LK04_RS06455 969d344e532d63b8350cd4f097ca325e 136 SUPERFAMILY SSF143100 1 65 5.49E-20 T 22-04-2016 LK04_RS06455 969d344e532d63b8350cd4f097ca325e 136 PANTHER PTHR34873:SF2 1 136 1.1E-24 T 22-04-2016 LK04_RS06455 969d344e532d63b8350cd4f097ca325e 136 PANTHER PTHR34873 1 136 1.1E-24 T 22-04-2016 LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 717 734 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 Gene3D G3DSA:2.40.170.20 203 734 1.8E-100 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 Pfam PF00593 TonB dependent receptor 498 732 3.7E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 PANTHER PTHR32552:SF14 79 734 2.3E-224 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 PANTHER PTHR32552:SF14 29 49 2.3E-224 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 Gene3D G3DSA:2.170.130.10 38 199 2.0E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 89 734 4.9E-127 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 PANTHER PTHR32552 79 734 2.3E-224 T 22-04-2016 LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 PANTHER PTHR32552 29 49 2.3E-224 T 22-04-2016 LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 184 6.9E-13 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS11540 03cb93e47a4de5aa7f0021bded0eeee8 734 SUPERFAMILY SSF56935 80 734 2.17E-102 T 22-04-2016 LK04_RS03770 6bf3d1081d42ce3cdd785b6e4f916ebf 372 SUPERFAMILY SSF75217 218 371 1.7E-37 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LK04_RS03770 6bf3d1081d42ce3cdd785b6e4f916ebf 372 SUPERFAMILY SSF55315 130 207 4.24E-10 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LK04_RS03770 6bf3d1081d42ce3cdd785b6e4f916ebf 372 Pfam PF00588 SpoU rRNA Methylase family 227 364 1.5E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LK04_RS03770 6bf3d1081d42ce3cdd785b6e4f916ebf 372 PIRSF PIRSF006280 1 372 8.2E-154 T 22-04-2016 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- LK04_RS03770 6bf3d1081d42ce3cdd785b6e4f916ebf 372 Gene3D G3DSA:3.40.1280.10 219 371 5.0E-39 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LK04_RS03770 6bf3d1081d42ce3cdd785b6e4f916ebf 372 Gene3D G3DSA:3.30.1330.30 127 206 4.4E-9 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LK04_RS03770 6bf3d1081d42ce3cdd785b6e4f916ebf 372 PANTHER PTHR12029 1 371 1.6E-163 T 22-04-2016 LK04_RS03770 6bf3d1081d42ce3cdd785b6e4f916ebf 372 PANTHER PTHR12029:SF57 1 371 1.6E-163 T 22-04-2016 LK04_RS03770 6bf3d1081d42ce3cdd785b6e4f916ebf 372 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 138 208 6.3E-12 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LK04_RS03770 6bf3d1081d42ce3cdd785b6e4f916ebf 372 SMART SM00967 137 212 1.8E-7 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 Pfam PF00571 CBS domain 346 392 1.4E-6 T 22-04-2016 IPR000644 CBS domain LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 Gene3D G3DSA:3.10.580.10 273 394 9.2E-20 T 22-04-2016 LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 Gene3D G3DSA:3.40.50.300 5 264 1.6E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 PANTHER PTHR24220:SF374 6 16 2.6E-168 T 22-04-2016 LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 PANTHER PTHR24220:SF374 41 273 2.6E-168 T 22-04-2016 LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 393 6.9E-179 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 SUPERFAMILY SSF54631 294 392 7.33E-11 T 22-04-2016 LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 Pfam PF00005 ABC transporter 44 192 5.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 SUPERFAMILY SSF52540 43 271 1.21E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 PANTHER PTHR24220 6 16 2.6E-168 T 22-04-2016 LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 PANTHER PTHR24220 41 273 2.6E-168 T 22-04-2016 LK04_RS03805 a2ff33bbc25484fb3697f73d6d548bf8 398 SMART SM00382 53 242 2.8E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06360 a2a8c8da8a078fc73fd92e44dc93c9a4 299 PANTHER PTHR30136 7 286 1.0E-64 T 22-04-2016 LK04_RS06360 a2a8c8da8a078fc73fd92e44dc93c9a4 299 Gene3D G3DSA:3.30.450.40 100 279 3.8E-51 T 22-04-2016 IPR029016 GAF domain-like LK04_RS06360 a2a8c8da8a078fc73fd92e44dc93c9a4 299 SUPERFAMILY SSF55781 96 277 6.02E-44 T 22-04-2016 IPR029016 GAF domain-like LK04_RS06360 a2a8c8da8a078fc73fd92e44dc93c9a4 299 Gene3D G3DSA:1.10.10.10 28 99 2.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06360 a2a8c8da8a078fc73fd92e44dc93c9a4 299 Pfam PF09339 IclR helix-turn-helix domain 33 84 1.2E-16 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS06360 a2a8c8da8a078fc73fd92e44dc93c9a4 299 SUPERFAMILY SSF46785 31 105 1.37E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06360 a2a8c8da8a078fc73fd92e44dc93c9a4 299 Pfam PF01614 Bacterial transcriptional regulator 161 272 1.6E-31 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal LK04_RS06360 a2a8c8da8a078fc73fd92e44dc93c9a4 299 SMART SM00346 31 121 4.2E-25 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS06900 8438b70916970f53f5e67a7261dd112f 89 PIRSF PIRSF004669 1 89 5.7E-33 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LK04_RS06900 8438b70916970f53f5e67a7261dd112f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.3E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LK04_RS06900 8438b70916970f53f5e67a7261dd112f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.3E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LK04_RS06900 8438b70916970f53f5e67a7261dd112f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.3E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LK04_RS06900 8438b70916970f53f5e67a7261dd112f 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.6E-30 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LK04_RS06900 8438b70916970f53f5e67a7261dd112f 89 PANTHER PTHR34040:SF2 1 89 1.7E-37 T 22-04-2016 LK04_RS06900 8438b70916970f53f5e67a7261dd112f 89 PANTHER PTHR34040 1 89 1.7E-37 T 22-04-2016 LK04_RS06900 8438b70916970f53f5e67a7261dd112f 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 6.4E-32 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.0E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.0E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.0E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 PANTHER PTHR30154:SF2 1 153 1.0E-62 T 22-04-2016 LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 Pfam PF01037 Lrp/AsnC ligand binding domain 78 144 8.7E-17 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 SUPERFAMILY SSF54909 68 153 9.12E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 Gene3D G3DSA:1.10.10.10 2 58 3.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 PANTHER PTHR30154 1 153 1.0E-62 T 22-04-2016 LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 SUPERFAMILY SSF46785 6 67 6.23E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 SMART SM00344 7 114 8.7E-41 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 6.2E-14 T 22-04-2016 LK04_RS19060 db3cca60cfe639d5f5de2a518fa9190b 153 Gene3D G3DSA:3.30.70.920 60 141 1.1E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 SUPERFAMILY SSF48208 42 539 4.82E-167 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 ProSitePatterns PS00928 Trehalase signature 2. 449 458 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 Hamap MF_01060 Periplasmic trehalase [treA]. 6 538 84.174 T 22-04-2016 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 PANTHER PTHR23403:SF13 40 547 1.5E-287 T 22-04-2016 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 PRINTS PR00744 Glycosyl hydrolase family 37 signature 378 394 1.7E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 PRINTS PR00744 Glycosyl hydrolase family 37 signature 442 458 1.7E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 PRINTS PR00744 Glycosyl hydrolase family 37 signature 335 352 1.7E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 PRINTS PR00744 Glycosyl hydrolase family 37 signature 520 533 1.7E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 PRINTS PR00744 Glycosyl hydrolase family 37 signature 194 212 1.7E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 PRINTS PR00744 Glycosyl hydrolase family 37 signature 269 286 1.7E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 PRINTS PR00744 Glycosyl hydrolase family 37 signature 303 320 1.7E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 PANTHER PTHR23403 40 547 1.5E-287 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 Pfam PF01204 Trehalase 58 536 6.0E-168 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS10975 fcac70128f2f572f1bd013a8f68048d9 559 ProSitePatterns PS00927 Trehalase signature 1. 152 165 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS14770 af39f30fd89ecd7eb5ca5cf51234a000 155 Pfam PF00075 RNase H 3 141 1.8E-52 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 LK04_RS14770 af39f30fd89ecd7eb5ca5cf51234a000 155 SUPERFAMILY SSF53098 3 143 1.39E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS14770 af39f30fd89ecd7eb5ca5cf51234a000 155 Gene3D G3DSA:3.30.420.10 2 147 1.2E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS14770 af39f30fd89ecd7eb5ca5cf51234a000 155 PANTHER PTHR10642 1 152 1.1E-61 T 22-04-2016 LK04_RS14770 af39f30fd89ecd7eb5ca5cf51234a000 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 37.806 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 LK04_RS13905 c8e2313a20889fd02bca238eabfe151f 429 Pfam PF00909 Ammonium Transporter Family 34 427 1.5E-125 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 LK04_RS13905 c8e2313a20889fd02bca238eabfe151f 429 TIGRFAM TIGR00836 amt: ammonium transporter 32 427 1.2E-135 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 LK04_RS13905 c8e2313a20889fd02bca238eabfe151f 429 PANTHER PTHR11730 4 429 1.2E-187 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 LK04_RS13905 c8e2313a20889fd02bca238eabfe151f 429 ProSitePatterns PS01219 Ammonium transporters signature. 183 208 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 LK04_RS13905 c8e2313a20889fd02bca238eabfe151f 429 Gene3D G3DSA:1.10.3430.10 27 408 3.5E-139 T 22-04-2016 IPR029020 Ammonium/urea transporter LK04_RS13905 c8e2313a20889fd02bca238eabfe151f 429 SUPERFAMILY SSF111352 28 408 3.14E-127 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 LK04_RS13905 c8e2313a20889fd02bca238eabfe151f 429 PANTHER PTHR11730:SF17 4 429 1.2E-187 T 22-04-2016 LK04_RS13700 fb8b3ad196258635607886b93285e25c 218 SUPERFAMILY SSF52266 40 214 1.15E-50 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LK04_RS13700 fb8b3ad196258635607886b93285e25c 218 Gene3D G3DSA:3.40.50.1110 39 216 7.3E-53 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LK04_RS13700 fb8b3ad196258635607886b93285e25c 218 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 41 51 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 LK04_RS13700 fb8b3ad196258635607886b93285e25c 218 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 43 198 3.3E-23 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LK04_RS13700 fb8b3ad196258635607886b93285e25c 218 PANTHER PTHR30383 15 217 4.8E-45 T 22-04-2016 LK04_RS19305 7fe122327823228e0f1a3e398aa52105 381 Pfam PF01168 Alanine racemase, N-terminal domain 25 250 2.2E-25 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS19305 7fe122327823228e0f1a3e398aa52105 381 PANTHER PTHR28004 10 381 2.0E-77 T 22-04-2016 LK04_RS19305 7fe122327823228e0f1a3e398aa52105 381 Pfam PF14031 Putative serine dehydratase domain 269 361 8.6E-18 T 22-04-2016 IPR026956 D-serine dehydratase-like domain LK04_RS19305 7fe122327823228e0f1a3e398aa52105 381 SUPERFAMILY SSF51419 25 256 1.44E-30 T 22-04-2016 IPR029066 PLP-binding barrel LK04_RS19305 7fe122327823228e0f1a3e398aa52105 381 Gene3D G3DSA:3.20.20.10 29 249 2.4E-22 T 22-04-2016 IPR029066 PLP-binding barrel LK04_RS19305 7fe122327823228e0f1a3e398aa52105 381 SMART SM01119 269 364 2.4E-25 T 22-04-2016 IPR026956 D-serine dehydratase-like domain LK04_RS03360 e9655a721363dd7d5845383ae527be1f 148 SUPERFAMILY SSF52218 1 148 1.43E-38 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS03360 e9655a721363dd7d5845383ae527be1f 148 Gene3D G3DSA:3.40.50.360 1 147 1.4E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS03360 e9655a721363dd7d5845383ae527be1f 148 Pfam PF00258 Flavodoxin 6 130 1.1E-21 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LK04_RS03360 e9655a721363dd7d5845383ae527be1f 148 PRINTS PR00369 Flavodoxin signature 108 127 4.4E-6 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS03360 e9655a721363dd7d5845383ae527be1f 148 PRINTS PR00369 Flavodoxin signature 53 64 4.4E-6 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS03360 e9655a721363dd7d5845383ae527be1f 148 PRINTS PR00369 Flavodoxin signature 84 94 4.4E-6 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS03360 e9655a721363dd7d5845383ae527be1f 148 PANTHER PTHR19384 1 144 7.7E-26 T 22-04-2016 LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 SUPERFAMILY SSF52540 294 519 3.47E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 SMART SM00382 24 229 2.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 SMART SM00382 341 515 1.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 Pfam PF12848 ABC transporter 223 299 2.7E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 Gene3D G3DSA:3.40.50.300 7 102 2.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 Gene3D G3DSA:3.40.50.300 134 279 2.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 1 546 1.3E-290 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 Pfam PF00005 ABC transporter 15 184 6.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 Pfam PF00005 ABC transporter 333 466 6.4E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 SUPERFAMILY SSF52540 7 236 2.71E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 PANTHER PTHR19211:SF7 1 548 0.0 T 22-04-2016 LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 PANTHER PTHR19211 1 548 0.0 T 22-04-2016 LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 Gene3D G3DSA:3.40.50.300 315 529 5.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15940 5c8eca924b938a0ea028bc8f6e4b40a2 548 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS11010 d15146283577c0690b50e9e1d3f89f03 314 Pfam PF02780 Transketolase, C-terminal domain 181 303 1.1E-29 T 22-04-2016 IPR033248 Transketolase, C-terminal domain LK04_RS11010 d15146283577c0690b50e9e1d3f89f03 314 Gene3D G3DSA:3.40.50.970 9 181 2.6E-38 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS11010 d15146283577c0690b50e9e1d3f89f03 314 SUPERFAMILY SSF52922 175 310 5.5E-33 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS11010 d15146283577c0690b50e9e1d3f89f03 314 PANTHER PTHR11624 10 311 1.3E-74 T 22-04-2016 IPR033247 Transketolase family LK04_RS11010 d15146283577c0690b50e9e1d3f89f03 314 SUPERFAMILY SSF52518 6 173 1.81E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS11010 d15146283577c0690b50e9e1d3f89f03 314 Gene3D G3DSA:3.40.50.920 182 310 5.6E-34 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS11010 d15146283577c0690b50e9e1d3f89f03 314 Pfam PF02779 Transketolase, pyrimidine binding domain 9 167 1.2E-16 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS11010 d15146283577c0690b50e9e1d3f89f03 314 PANTHER PTHR11624:SF2 10 311 1.3E-74 T 22-04-2016 LK04_RS11010 d15146283577c0690b50e9e1d3f89f03 314 SMART SM00861 5 170 2.1E-27 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS05820 aefb022984d8641ac6bd40a6c0ad5cb6 303 SUPERFAMILY SSF53850 86 290 1.21E-34 T 22-04-2016 LK04_RS05820 aefb022984d8641ac6bd40a6c0ad5cb6 303 Gene3D G3DSA:3.40.190.10 191 248 2.2E-10 T 22-04-2016 LK04_RS05820 aefb022984d8641ac6bd40a6c0ad5cb6 303 Gene3D G3DSA:3.40.190.10 84 190 3.6E-21 T 22-04-2016 LK04_RS05820 aefb022984d8641ac6bd40a6c0ad5cb6 303 PANTHER PTHR30126 1 300 1.3E-116 T 22-04-2016 LK04_RS05820 aefb022984d8641ac6bd40a6c0ad5cb6 303 PANTHER PTHR30126:SF31 1 300 1.3E-116 T 22-04-2016 LK04_RS05820 aefb022984d8641ac6bd40a6c0ad5cb6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 4.0E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05820 aefb022984d8641ac6bd40a6c0ad5cb6 303 Pfam PF03466 LysR substrate binding domain 85 282 2.7E-37 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS05820 aefb022984d8641ac6bd40a6c0ad5cb6 303 Gene3D G3DSA:1.10.10.10 1 83 2.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05820 aefb022984d8641ac6bd40a6c0ad5cb6 303 SUPERFAMILY SSF46785 1 84 7.78E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 250 435 4.4E-34 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 Gene3D G3DSA:3.30.420.40 1 240 5.2E-71 T 22-04-2016 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 PANTHER PTHR10196:SF72 3 479 0.0 T 22-04-2016 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 PANTHER PTHR10196 3 479 0.0 T 22-04-2016 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 SUPERFAMILY SSF53067 242 479 5.18E-61 T 22-04-2016 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 TIGRFAM TIGR01312 XylB: xylulokinase 3 473 1.3E-186 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 Gene3D G3DSA:3.30.420.40 243 478 8.0E-52 T 22-04-2016 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 SUPERFAMILY SSF53067 2 242 9.07E-76 T 22-04-2016 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 9.3E-83 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS18630 bed7be9695daf5713523c87678302bfe 480 PIRSF PIRSF000538 1 480 3.2E-141 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS06010 98fa0bbb12baad0b02e2fe9a3c716aa6 320 PANTHER PTHR11732:SF132 4 317 2.6E-133 T 22-04-2016 LK04_RS06010 98fa0bbb12baad0b02e2fe9a3c716aa6 320 Pfam PF00248 Aldo/keto reductase family 19 316 5.9E-73 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS06010 98fa0bbb12baad0b02e2fe9a3c716aa6 320 Gene3D G3DSA:3.20.20.100 5 318 4.9E-95 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS06010 98fa0bbb12baad0b02e2fe9a3c716aa6 320 SUPERFAMILY SSF51430 5 317 2.62E-92 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS06010 98fa0bbb12baad0b02e2fe9a3c716aa6 320 PANTHER PTHR11732 4 317 2.6E-133 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS09480 5503681c58a0744a6b649b3aea2c649d 285 SUPERFAMILY SSF48179 163 265 8.5E-20 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS09480 5503681c58a0744a6b649b3aea2c649d 285 Gene3D G3DSA:3.40.50.720 3 169 5.3E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09480 5503681c58a0744a6b649b3aea2c649d 285 PANTHER PTHR22981:SF63 2 199 3.2E-36 T 22-04-2016 LK04_RS09480 5503681c58a0744a6b649b3aea2c649d 285 SUPERFAMILY SSF51735 3 159 3.65E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09480 5503681c58a0744a6b649b3aea2c649d 285 Pfam PF09130 Domain of unknown function (DUF1932) 190 258 1.0E-15 T 22-04-2016 IPR015814 Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal LK04_RS09480 5503681c58a0744a6b649b3aea2c649d 285 PANTHER PTHR22981 2 199 3.2E-36 T 22-04-2016 LK04_RS09480 5503681c58a0744a6b649b3aea2c649d 285 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 129 1.5E-6 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LK04_RS09480 5503681c58a0744a6b649b3aea2c649d 285 Gene3D G3DSA:1.10.1040.10 170 266 1.1E-9 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS11265 1675bd5ea42119bd7e89524478b1afb6 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS11265 1675bd5ea42119bd7e89524478b1afb6 477 Gene3D G3DSA:3.30.1360.60 399 474 5.2E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS11265 1675bd5ea42119bd7e89524478b1afb6 477 PANTHER PTHR30009 6 476 1.2E-258 T 22-04-2016 LK04_RS11265 1675bd5ea42119bd7e89524478b1afb6 477 SUPERFAMILY SSF55604 401 474 1.18E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS11265 1675bd5ea42119bd7e89524478b1afb6 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 1.6E-88 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 LK04_RS11265 1675bd5ea42119bd7e89524478b1afb6 477 Pfam PF00367 phosphotransferase system, EIIB 404 436 2.6E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS11265 1675bd5ea42119bd7e89524478b1afb6 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 1.2E-82 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS11265 1675bd5ea42119bd7e89524478b1afb6 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 4.9E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS11265 1675bd5ea42119bd7e89524478b1afb6 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 3.9E-230 T 22-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS11265 1675bd5ea42119bd7e89524478b1afb6 477 PANTHER PTHR30009:SF2 6 476 1.2E-258 T 22-04-2016 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 Gene3D G3DSA:3.40.50.300 134 306 1.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 SUPERFAMILY SSF46689 384 436 1.61E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 PANTHER PTHR32071:SF5 1 443 5.2E-242 T 22-04-2016 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 SUPERFAMILY SSF52540 135 379 1.83E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 SMART SM00448 5 116 6.5E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 Pfam PF00158 Sigma-54 interaction domain 136 301 3.9E-71 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 Gene3D G3DSA:1.10.8.60 308 384 2.7E-22 T 22-04-2016 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 SUPERFAMILY SSF52172 4 179 1.25E-41 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 221 236 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 Gene3D G3DSA:1.10.10.60 389 436 2.6E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 SMART SM00382 155 298 1.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 Gene3D G3DSA:3.40.50.2300 2 125 7.9E-36 T 22-04-2016 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 PANTHER PTHR32071 1 443 5.2E-242 T 22-04-2016 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 Pfam PF00072 Response regulator receiver domain 8 116 4.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS04095 6bd624b31a9c2c51c52db99f7000eee6 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 159 172 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LK04_RS18480 5f436e38e08e234285bbcb3db0ebaff8 321 Pfam PF04393 Protein of unknown function (DUF535) 31 306 1.9E-97 T 22-04-2016 IPR007488 Protein of unknown function DUF535 LK04_RS18480 5f436e38e08e234285bbcb3db0ebaff8 321 PANTHER PTHR38785 1 312 2.2E-93 T 22-04-2016 LK04_RS00600 9f3013624c44bab7d29883443017ca8d 188 PANTHER PTHR11839:SF12 3 180 5.3E-94 T 22-04-2016 LK04_RS00600 9f3013624c44bab7d29883443017ca8d 188 SUPERFAMILY SSF55811 7 180 2.98E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS00600 9f3013624c44bab7d29883443017ca8d 188 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LK04_RS00600 9f3013624c44bab7d29883443017ca8d 188 Gene3D G3DSA:3.90.79.10 10 183 5.5E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS00600 9f3013624c44bab7d29883443017ca8d 188 PANTHER PTHR11839 3 180 5.3E-94 T 22-04-2016 LK04_RS00600 9f3013624c44bab7d29883443017ca8d 188 Pfam PF00293 NUDIX domain 47 155 9.0E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS12095 c4bac3fa6e97982a97e69dcc07ff0ff4 587 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 1.2E-80 T 22-04-2016 IPR003776 YcaO-like domain LK04_RS12095 c4bac3fa6e97982a97e69dcc07ff0ff4 587 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 6.8E-163 T 22-04-2016 IPR003776 YcaO-like domain LK04_RS08180 a85e1a4907cd82b374b3d5969cdc90da 397 PIRSF PIRSF001413 1 397 9.5E-173 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LK04_RS08180 a85e1a4907cd82b374b3d5969cdc90da 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 377 5.4E-52 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS08180 a85e1a4907cd82b374b3d5969cdc90da 397 Gene3D G3DSA:3.40.50.1100 97 176 3.2E-22 T 22-04-2016 LK04_RS08180 a85e1a4907cd82b374b3d5969cdc90da 397 PANTHER PTHR10314:SF3 7 396 9.2E-228 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LK04_RS08180 a85e1a4907cd82b374b3d5969cdc90da 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 1.1E-190 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LK04_RS08180 a85e1a4907cd82b374b3d5969cdc90da 397 Gene3D G3DSA:3.40.50.1100 177 393 7.3E-94 T 22-04-2016 LK04_RS08180 a85e1a4907cd82b374b3d5969cdc90da 397 SUPERFAMILY SSF53686 5 390 4.19E-144 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS08180 a85e1a4907cd82b374b3d5969cdc90da 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LK04_RS08180 a85e1a4907cd82b374b3d5969cdc90da 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 49.698 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LK04_RS08180 a85e1a4907cd82b374b3d5969cdc90da 397 PANTHER PTHR10314 7 396 9.2E-228 T 22-04-2016 LK04_RS03320 0c34a1a4f447f668777f96731f74b3d2 366 Gene3D G3DSA:3.40.50.150 184 316 3.2E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS03320 0c34a1a4f447f668777f96731f74b3d2 366 Pfam PF01728 FtsJ-like methyltransferase 186 278 4.5E-8 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 LK04_RS03320 0c34a1a4f447f668777f96731f74b3d2 366 PIRSF PIRSF028774 1 360 7.1E-189 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 LK04_RS03320 0c34a1a4f447f668777f96731f74b3d2 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 85.849 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 LK04_RS03320 0c34a1a4f447f668777f96731f74b3d2 366 PANTHER PTHR37524 1 360 1.5E-223 T 22-04-2016 LK04_RS03320 0c34a1a4f447f668777f96731f74b3d2 366 SUPERFAMILY SSF53335 184 287 2.44E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS03320 0c34a1a4f447f668777f96731f74b3d2 366 PANTHER PTHR37524:SF2 1 360 1.5E-223 T 22-04-2016 LK04_RS11810 519a95b04fac9dd13c83844d2b15c6d2 92 PRINTS PR00112 Acylphosphatase signature 5 20 5.2E-5 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LK04_RS11810 519a95b04fac9dd13c83844d2b15c6d2 92 PRINTS PR00112 Acylphosphatase signature 61 81 5.2E-5 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LK04_RS11810 519a95b04fac9dd13c83844d2b15c6d2 92 PRINTS PR00112 Acylphosphatase signature 26 51 5.2E-5 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LK04_RS11810 519a95b04fac9dd13c83844d2b15c6d2 92 PANTHER PTHR10029 5 82 8.1E-30 T 22-04-2016 LK04_RS11810 519a95b04fac9dd13c83844d2b15c6d2 92 Pfam PF00708 Acylphosphatase 4 90 3.6E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LK04_RS11810 519a95b04fac9dd13c83844d2b15c6d2 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LK04_RS11810 519a95b04fac9dd13c83844d2b15c6d2 92 Gene3D G3DSA:3.30.70.100 5 90 1.3E-30 T 22-04-2016 LK04_RS11810 519a95b04fac9dd13c83844d2b15c6d2 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 92 27.278 T 22-04-2016 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LK04_RS11810 519a95b04fac9dd13c83844d2b15c6d2 92 SUPERFAMILY SSF54975 3 84 3.71E-28 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LK04_RS10025 5456a95a08593c237afb22bd2d6121b5 425 SUPERFAMILY SSF56349 80 403 2.0E-54 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LK04_RS10025 5456a95a08593c237afb22bd2d6121b5 425 Gene3D G3DSA:1.10.443.10 199 404 3.2E-37 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LK04_RS10025 5456a95a08593c237afb22bd2d6121b5 425 PANTHER PTHR30349 12 421 7.0E-132 T 22-04-2016 LK04_RS10025 5456a95a08593c237afb22bd2d6121b5 425 Pfam PF12167 Domain of unknown function (DUF3596) 5 67 3.9E-25 T 22-04-2016 IPR022000 Domain of unknown function (DUF3596) LK04_RS10025 5456a95a08593c237afb22bd2d6121b5 425 Gene3D G3DSA:1.10.150.130 81 194 7.7E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal LK04_RS10025 5456a95a08593c237afb22bd2d6121b5 425 Pfam PF00589 Phage integrase family 201 393 1.7E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LK04_RS10025 5456a95a08593c237afb22bd2d6121b5 425 PANTHER PTHR30349:SF36 12 421 7.0E-132 T 22-04-2016 LK04_RS17430 24cb755689cd37e3bad9126a5d8c2cc7 163 Pfam PF00583 Acetyltransferase (GNAT) family 58 138 3.5E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS17430 24cb755689cd37e3bad9126a5d8c2cc7 163 SUPERFAMILY SSF55729 4 162 1.15E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS17430 24cb755689cd37e3bad9126a5d8c2cc7 163 Gene3D G3DSA:3.40.630.30 2 162 2.6E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS17430 24cb755689cd37e3bad9126a5d8c2cc7 163 PANTHER PTHR23091 1 162 2.7E-58 T 22-04-2016 LK04_RS17430 24cb755689cd37e3bad9126a5d8c2cc7 163 PANTHER PTHR23091:SF262 1 162 2.7E-58 T 22-04-2016 LK04_RS07035 126d20fec89023e71410d36962f163d7 476 PANTHER PTHR30288 2 469 4.8E-92 T 22-04-2016 LK04_RS07035 126d20fec89023e71410d36962f163d7 476 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 1.2E-21 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 LK04_RS07035 126d20fec89023e71410d36962f163d7 476 PANTHER PTHR30288:SF0 2 469 4.8E-92 T 22-04-2016 LK04_RS07035 126d20fec89023e71410d36962f163d7 476 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 224 454 2.8E-60 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 LK04_RS16680 539cbade77237354ec137c08d4fdb020 213 PANTHER PTHR11260:SF44 9 208 9.3E-125 T 22-04-2016 LK04_RS16680 539cbade77237354ec137c08d4fdb020 213 Gene3D G3DSA:3.40.30.10 7 101 5.3E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS16680 539cbade77237354ec137c08d4fdb020 213 Gene3D G3DSA:1.20.1050.10 102 208 1.1E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS16680 539cbade77237354ec137c08d4fdb020 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.3E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS16680 539cbade77237354ec137c08d4fdb020 213 PANTHER PTHR11260 9 208 9.3E-125 T 22-04-2016 LK04_RS16680 539cbade77237354ec137c08d4fdb020 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 4.8E-12 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal LK04_RS16680 539cbade77237354ec137c08d4fdb020 213 SUPERFAMILY SSF52833 11 110 4.01E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS16680 539cbade77237354ec137c08d4fdb020 213 SUPERFAMILY SSF47616 82 208 8.24E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS02125 e8427344934a29a63fcc52d5d8e4acbe 321 SMART SM00972 93 155 1.5E-8 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS02125 e8427344934a29a63fcc52d5d8e4acbe 321 SMART SM00972 254 318 3.4E-10 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS02125 e8427344934a29a63fcc52d5d8e4acbe 321 Pfam PF05229 Spore Coat Protein U domain 16 155 2.9E-14 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS02125 e8427344934a29a63fcc52d5d8e4acbe 321 Pfam PF05229 Spore Coat Protein U domain 182 317 2.4E-29 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS02125 e8427344934a29a63fcc52d5d8e4acbe 321 PANTHER PTHR37089:SF1 1 321 3.7E-28 T 22-04-2016 LK04_RS02125 e8427344934a29a63fcc52d5d8e4acbe 321 PANTHER PTHR37089 1 321 3.7E-28 T 22-04-2016 LK04_RS13685 5be8c2fdc16c255ec7aae258aa115163 354 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.811 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 LK04_RS13685 5be8c2fdc16c255ec7aae258aa115163 354 SUPERFAMILY SSF56059 79 274 4.77E-57 T 22-04-2016 LK04_RS13685 5be8c2fdc16c255ec7aae258aa115163 354 Pfam PF02222 ATP-grasp domain 88 254 4.1E-55 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 LK04_RS13685 5be8c2fdc16c255ec7aae258aa115163 354 SUPERFAMILY SSF52440 2 74 4.75E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS13685 5be8c2fdc16c255ec7aae258aa115163 354 Gene3D G3DSA:3.40.50.20 1 69 1.8E-23 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS13685 5be8c2fdc16c255ec7aae258aa115163 354 Gene3D G3DSA:3.30.470.20 119 352 4.4E-81 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS13685 5be8c2fdc16c255ec7aae258aa115163 354 SUPERFAMILY SSF51246 278 353 1.41E-20 T 22-04-2016 IPR011054 Rudiment single hybrid motif LK04_RS13685 5be8c2fdc16c255ec7aae258aa115163 354 PANTHER PTHR11609:SF5 1 332 6.1E-107 T 22-04-2016 LK04_RS13685 5be8c2fdc16c255ec7aae258aa115163 354 PANTHER PTHR11609 1 332 6.1E-107 T 22-04-2016 LK04_RS13685 5be8c2fdc16c255ec7aae258aa115163 354 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 328 4.6E-112 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 LK04_RS05895 e041968fbcf14ecf40b484aac2695a8a 370 Gene3D G3DSA:3.40.50.300 103 349 4.2E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05895 e041968fbcf14ecf40b484aac2695a8a 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 1.0E-97 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein LK04_RS05895 e041968fbcf14ecf40b484aac2695a8a 370 SUPERFAMILY SSF52540 109 356 1.12E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05895 e041968fbcf14ecf40b484aac2695a8a 370 PANTHER PTHR23264:SF19 9 368 2.2E-182 T 22-04-2016 LK04_RS05895 e041968fbcf14ecf40b484aac2695a8a 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 36.658 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein LK04_RS05895 e041968fbcf14ecf40b484aac2695a8a 370 PANTHER PTHR23264 9 368 2.2E-182 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein LK04_RS05895 e041968fbcf14ecf40b484aac2695a8a 370 SUPERFAMILY SSF117916 15 85 8.5E-5 T 22-04-2016 LK04_RS05895 e041968fbcf14ecf40b484aac2695a8a 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 LK04_RS16200 f1efb0bb99b62b4e73878a376056f1ba 159 SUPERFAMILY SSF69118 5 145 9.24E-42 T 22-04-2016 IPR029032 AhpD-like LK04_RS16200 f1efb0bb99b62b4e73878a376056f1ba 159 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 77 2.1E-12 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LK04_RS16200 f1efb0bb99b62b4e73878a376056f1ba 159 Gene3D G3DSA:1.20.1290.10 3 146 5.6E-49 T 22-04-2016 IPR029032 AhpD-like LK04_RS16200 f1efb0bb99b62b4e73878a376056f1ba 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 1.5E-15 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 Pfam PF01565 FAD binding domain 22 151 7.1E-23 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 332 7.8E-34 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 SUPERFAMILY SSF56176 7 199 2.38E-43 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 Gene3D G3DSA:3.30.43.10 6 71 2.3E-19 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 PANTHER PTHR21071 7 340 3.7E-168 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 SUPERFAMILY SSF56194 207 342 7.98E-51 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 333 3.7E-103 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 PANTHER PTHR21071:SF6 7 340 3.7E-168 T 22-04-2016 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 Gene3D G3DSA:3.90.78.10 233 344 3.5E-45 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 Gene3D G3DSA:3.30.465.10 76 232 1.8E-51 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS17850 00189016c988e74baa6796bdc241ad59 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 83.934 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 Gene3D G3DSA:1.10.10.60 210 257 1.8E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 SUPERFAMILY SSF51182 17 182 1.16E-10 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 Pfam PF12833 Helix-turn-helix domain 179 257 5.1E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 SUPERFAMILY SSF46689 209 257 1.33E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 Gene3D G3DSA:1.10.10.60 155 209 5.8E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 251 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 Pfam PF02311 AraC-like ligand binding domain 28 99 5.6E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 PANTHER PTHR11019:SF98 11 258 3.1E-101 T 22-04-2016 LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 PANTHER PTHR11019 11 258 3.1E-101 T 22-04-2016 LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 Gene3D G3DSA:2.60.120.10 24 89 1.6E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS05340 1efc89c9ca12303de2136644ed368308 259 SMART SM00342 173 255 1.5E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS18615 265e559ca8f9f32f62f9563505ff0750 371 PANTHER PTHR13794:SF4 1 371 1.1E-90 T 22-04-2016 LK04_RS18615 265e559ca8f9f32f62f9563505ff0750 371 SUPERFAMILY SSF54826 1 131 2.25E-31 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS18615 265e559ca8f9f32f62f9563505ff0750 371 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 18 126 8.8E-18 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LK04_RS18615 265e559ca8f9f32f62f9563505ff0750 371 SUPERFAMILY SSF51604 114 370 6.81E-68 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS18615 265e559ca8f9f32f62f9563505ff0750 371 PANTHER PTHR13794 1 371 1.1E-90 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS18615 265e559ca8f9f32f62f9563505ff0750 371 Gene3D G3DSA:3.20.20.120 131 360 8.9E-69 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS18615 265e559ca8f9f32f62f9563505ff0750 371 SMART SM00922 145 244 1.0E-15 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LK04_RS18615 265e559ca8f9f32f62f9563505ff0750 371 Gene3D G3DSA:3.30.390.10 1 130 2.2E-45 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS18615 265e559ca8f9f32f62f9563505ff0750 371 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 101 126 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LK04_RS18615 265e559ca8f9f32f62f9563505ff0750 371 Pfam PF13378 Enolase C-terminal domain-like 149 362 2.8E-55 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS10795 1063435ef63a23aed8320bc08b4ef10a 193 SUPERFAMILY SSF51182 34 164 2.74E-21 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS10795 1063435ef63a23aed8320bc08b4ef10a 193 PANTHER PTHR36448 23 193 2.1E-50 T 22-04-2016 LK04_RS10795 1063435ef63a23aed8320bc08b4ef10a 193 PIRSF PIRSF019307 29 193 1.7E-58 T 22-04-2016 IPR014500 Uncharacterised conserved protein UCP019307, cupin-type LK04_RS10795 1063435ef63a23aed8320bc08b4ef10a 193 PANTHER PTHR36448:SF2 23 193 2.1E-50 T 22-04-2016 LK04_RS10795 1063435ef63a23aed8320bc08b4ef10a 193 Gene3D G3DSA:2.60.120.10 42 167 4.3E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS19095 53f1ba0996683e23c70abcf6a42534cf 131 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 129 2.8E-46 T 22-04-2016 IPR016052 Bacteriophage 933W, L0136 LK04_RS19095 53f1ba0996683e23c70abcf6a42534cf 131 Pfam PF04076 Bacterial OB fold (BOF) protein 31 129 4.5E-35 T 22-04-2016 IPR005220 Bacterial OB-fold LK04_RS19095 53f1ba0996683e23c70abcf6a42534cf 131 PANTHER PTHR36571 5 131 2.8E-47 T 22-04-2016 LK04_RS19095 53f1ba0996683e23c70abcf6a42534cf 131 Gene3D G3DSA:2.40.50.200 32 130 8.2E-38 T 22-04-2016 IPR005220 Bacterial OB-fold LK04_RS19095 53f1ba0996683e23c70abcf6a42534cf 131 SUPERFAMILY SSF101756 33 129 1.96E-31 T 22-04-2016 IPR005220 Bacterial OB-fold LK04_RS19095 53f1ba0996683e23c70abcf6a42534cf 131 PANTHER PTHR36571:SF1 5 131 2.8E-47 T 22-04-2016 LK04_RS07945 41431d3d2ac25c47f461dffc72e15328 77 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 4 74 2.0E-13 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 LK04_RS07945 41431d3d2ac25c47f461dffc72e15328 77 Pfam PF07351 Protein of unknown function (DUF1480) 4 74 9.8E-22 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 PANTHER PTHR30203 42 455 3.1E-90 T 22-04-2016 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 PANTHER PTHR30203:SF3 42 455 3.1E-90 T 22-04-2016 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 Pfam PF02321 Outer membrane efflux protein 57 244 2.7E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 Pfam PF02321 Outer membrane efflux protein 268 451 8.7E-18 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 SUPERFAMILY SSF56954 1 454 2.22E-101 T 22-04-2016 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 Gene3D G3DSA:1.20.1600.10 132 302 3.1E-93 T 22-04-2016 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 Gene3D G3DSA:1.20.1600.10 44 83 3.1E-93 T 22-04-2016 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 Gene3D G3DSA:1.20.1600.10 340 454 3.1E-93 T 22-04-2016 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 Gene3D G3DSA:2.20.200.10 93 131 4.0E-12 T 22-04-2016 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 Gene3D G3DSA:2.20.200.10 303 338 4.0E-12 T 22-04-2016 LK04_RS11630 aea5e580ecfca51e81ad7a608f19e5be 456 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 453 5.3E-107 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LK04_RS05060 f9dcdeafb4749702f51f4730346cde06 403 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 6 397 3.5E-54 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 LK04_RS05060 f9dcdeafb4749702f51f4730346cde06 403 SUPERFAMILY SSF56563 125 398 6.93E-73 T 22-04-2016 LK04_RS05060 f9dcdeafb4749702f51f4730346cde06 403 Pfam PF05065 Phage capsid family 130 397 6.7E-54 T 22-04-2016 IPR024455 Phage capsid LK04_RS15240 114f3f54b813383f670c306f5b916520 254 PANTHER PTHR30251:SF4 1 253 6.3E-51 T 22-04-2016 LK04_RS15240 114f3f54b813383f670c306f5b916520 254 Gene3D G3DSA:2.60.40.360 25 145 9.7E-17 T 22-04-2016 IPR008962 PapD-like LK04_RS15240 114f3f54b813383f670c306f5b916520 254 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 143 4.6E-18 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LK04_RS15240 114f3f54b813383f670c306f5b916520 254 PANTHER PTHR30251 1 253 6.3E-51 T 22-04-2016 LK04_RS15240 114f3f54b813383f670c306f5b916520 254 SUPERFAMILY SSF49354 17 142 2.07E-23 T 22-04-2016 IPR008962 PapD-like LK04_RS03085 92ce1c438f9d8380bb5970653e483529 223 PANTHER PTHR31527 11 197 1.3E-41 T 22-04-2016 LK04_RS03085 92ce1c438f9d8380bb5970653e483529 223 Pfam PF09347 Domain of unknown function (DUF1989) 12 177 8.1E-49 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 LK04_RS03085 92ce1c438f9d8380bb5970653e483529 223 PANTHER PTHR31527:SF0 11 197 1.3E-41 T 22-04-2016 LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 PANTHER PTHR30204:SF4 1 108 9.0E-39 T 22-04-2016 LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 SMART SM00422 1 69 2.1E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 Pfam PF13411 MerR HTH family regulatory protein 1 67 8.2E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.4E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.4E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.4E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 PANTHER PTHR30204 1 108 9.0E-39 T 22-04-2016 LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 SUPERFAMILY SSF46955 1 108 6.23E-32 T 22-04-2016 IPR009061 Putative DNA-binding domain LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 Gene3D G3DSA:1.10.1660.10 55 108 2.2E-11 T 22-04-2016 LK04_RS02315 d5b371c91a3ad0483ea4b903db5ea92e 110 Gene3D G3DSA:1.10.1660.10 1 54 1.5E-24 T 22-04-2016 LK04_RS10955 4a2f82753c30fb4b75a2663f604f059f 453 Pfam PF02515 CoA-transferase family III 199 393 8.2E-45 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 LK04_RS10955 4a2f82753c30fb4b75a2663f604f059f 453 SUPERFAMILY SSF89796 197 395 3.27E-57 T 22-04-2016 IPR023606 CoA-transferase family III domain LK04_RS10955 4a2f82753c30fb4b75a2663f604f059f 453 SUPERFAMILY SSF89796 60 193 9.42E-20 T 22-04-2016 IPR023606 CoA-transferase family III domain LK04_RS10955 4a2f82753c30fb4b75a2663f604f059f 453 Gene3D G3DSA:3.40.50.10540 195 412 5.7E-63 T 22-04-2016 IPR023606 CoA-transferase family III domain LK04_RS10955 4a2f82753c30fb4b75a2663f604f059f 453 Gene3D G3DSA:3.40.50.10540 85 141 5.3E-4 T 22-04-2016 IPR023606 CoA-transferase family III domain LK04_RS07740 8e2d95a1f2866e3fe34eb06145a18d34 414 PANTHER PTHR30462:SF1 1 414 3.4E-226 T 22-04-2016 LK04_RS07740 8e2d95a1f2866e3fe34eb06145a18d34 414 SUPERFAMILY SSF48695 211 255 9.63E-5 T 22-04-2016 IPR011031 Multihaem cytochrome LK04_RS07740 8e2d95a1f2866e3fe34eb06145a18d34 414 Pfam PF04403 Paraquat-inducible protein A 250 404 5.5E-44 T 22-04-2016 IPR007498 Paraquat-inducible protein A LK04_RS07740 8e2d95a1f2866e3fe34eb06145a18d34 414 Pfam PF04403 Paraquat-inducible protein A 54 204 3.5E-37 T 22-04-2016 IPR007498 Paraquat-inducible protein A LK04_RS07740 8e2d95a1f2866e3fe34eb06145a18d34 414 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 4 404 8.8E-174 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 LK04_RS07740 8e2d95a1f2866e3fe34eb06145a18d34 414 Gene3D G3DSA:3.90.10.10 15 43 2.6E-5 T 22-04-2016 LK04_RS07740 8e2d95a1f2866e3fe34eb06145a18d34 414 Gene3D G3DSA:3.90.10.10 202 248 2.6E-5 T 22-04-2016 LK04_RS07740 8e2d95a1f2866e3fe34eb06145a18d34 414 PANTHER PTHR30462 1 414 3.4E-226 T 22-04-2016 LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 Pfam PF00255 Glutathione peroxidase 3 109 4.6E-44 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 Gene3D G3DSA:3.40.30.10 1 180 3.1E-66 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 SUPERFAMILY SSF52833 1 179 3.93E-55 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 22-04-2016 IPR029759 Glutathione peroxidase active site LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 PANTHER PTHR11592:SF40 2 181 2.1E-79 T 22-04-2016 LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 PRINTS PR01011 Glutathione peroxidase family signature 56 72 5.2E-19 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 5.2E-19 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 PRINTS PR01011 Glutathione peroxidase family signature 21 38 5.2E-19 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 PANTHER PTHR11592 2 181 2.1E-79 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 PIRSF PIRSF000303 1 181 1.6E-65 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LK04_RS10430 ccae9a64b36c700d90a868d4a690c89c 181 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site LK04_RS19530 823e158bb9a286fc57aaed7a21934609 170 Pfam PF07813 LTXXQ motif family protein 43 140 2.9E-17 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 LK04_RS19530 823e158bb9a286fc57aaed7a21934609 170 PANTHER PTHR38102:SF2 1 163 5.3E-59 T 22-04-2016 LK04_RS19530 823e158bb9a286fc57aaed7a21934609 170 PIRSF PIRSF034445 1 150 1.2E-27 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 LK04_RS19530 823e158bb9a286fc57aaed7a21934609 170 PANTHER PTHR38102 1 163 5.3E-59 T 22-04-2016 LK04_RS16565 d654528f5ed372c569d7ef03bfb523da 419 Gene3D G3DSA:3.65.10.10 220 416 1.6E-62 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LK04_RS16565 d654528f5ed372c569d7ef03bfb523da 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 46.751 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS16565 d654528f5ed372c569d7ef03bfb523da 419 Gene3D G3DSA:3.65.10.10 21 219 4.0E-67 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LK04_RS16565 d654528f5ed372c569d7ef03bfb523da 419 PANTHER PTHR21090 1 419 4.1E-217 T 22-04-2016 LK04_RS16565 d654528f5ed372c569d7ef03bfb523da 419 SUPERFAMILY SSF55205 1 418 2.78E-145 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 LK04_RS16565 d654528f5ed372c569d7ef03bfb523da 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 2.4E-184 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS16565 d654528f5ed372c569d7ef03bfb523da 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 1.1E-127 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 SUPERFAMILY SSF50249 3 123 1.03E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 Pfam PF00164 Ribosomal protein S12/S23 9 123 5.8E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 PIRSF PIRSF002133 1 124 4.6E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.5E-70 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 PANTHER PTHR11652 1 116 6.7E-75 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 Gene3D G3DSA:2.40.50.140 1 123 7.2E-65 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LK04_RS00835 bcb47a9494a34c5137f33f416c3eb263 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.5 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LK04_RS15210 39aa098299aafdefeb8c6cd2980bed6a 439 Gene3D G3DSA:1.20.1250.20 8 202 4.9E-51 T 22-04-2016 LK04_RS15210 39aa098299aafdefeb8c6cd2980bed6a 439 SUPERFAMILY SSF103473 4 419 3.53E-92 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS15210 39aa098299aafdefeb8c6cd2980bed6a 439 Pfam PF07690 Major Facilitator Superfamily 19 382 1.5E-63 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS15210 39aa098299aafdefeb8c6cd2980bed6a 439 Gene3D G3DSA:1.20.1250.20 223 417 1.4E-34 T 22-04-2016 LK04_RS15210 39aa098299aafdefeb8c6cd2980bed6a 439 PANTHER PTHR11662:SF18 1 428 2.0E-114 T 22-04-2016 LK04_RS15210 39aa098299aafdefeb8c6cd2980bed6a 439 PANTHER PTHR11662 1 428 2.0E-114 T 22-04-2016 LK04_RS15210 39aa098299aafdefeb8c6cd2980bed6a 439 PIRSF PIRSF002808 1 417 3.7E-40 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS05480 cf8e7363b0e5c65ae5d4d95e880b0b63 405 Gene3D G3DSA:3.90.1150.10 281 404 1.6E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS05480 cf8e7363b0e5c65ae5d4d95e880b0b63 405 Pfam PF00155 Aminotransferase class I and II 36 389 2.1E-47 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS05480 cf8e7363b0e5c65ae5d4d95e880b0b63 405 Gene3D G3DSA:3.40.640.10 52 280 1.4E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS05480 cf8e7363b0e5c65ae5d4d95e880b0b63 405 PANTHER PTHR11751 10 401 5.6E-199 T 22-04-2016 LK04_RS05480 cf8e7363b0e5c65ae5d4d95e880b0b63 405 PANTHER PTHR11751:SF303 10 401 5.6E-199 T 22-04-2016 LK04_RS05480 cf8e7363b0e5c65ae5d4d95e880b0b63 405 SUPERFAMILY SSF53383 9 403 2.04E-94 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 PANTHER PTHR10584 1 307 4.4E-105 T 22-04-2016 LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 PRINTS PR00990 Ribokinase signature 176 191 1.8E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 PRINTS PR00990 Ribokinase signature 220 231 1.8E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 PRINTS PR00990 Ribokinase signature 9 30 1.8E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 PRINTS PR00990 Ribokinase signature 36 55 1.8E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 PRINTS PR00990 Ribokinase signature 108 121 1.8E-37 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 PANTHER PTHR10584:SF166 1 307 4.4E-105 T 22-04-2016 LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 Gene3D G3DSA:3.40.1190.20 5 307 3.0E-96 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 302 9.2E-110 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 Pfam PF00294 pfkB family carbohydrate kinase 5 297 7.5E-77 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS19120 3e00119e71fc4a278b947d02b7063d59 309 SUPERFAMILY SSF53613 5 305 3.43E-84 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 SUPERFAMILY SSF54106 506 550 6.28E-10 T 22-04-2016 IPR018392 LysM domain LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 PANTHER PTHR30404:SF1 1 438 2.9E-204 T 22-04-2016 LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 SMART SM00646 246 405 5.0E-68 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 Gene3D G3DSA:3.10.350.10 448 493 2.2E-16 T 22-04-2016 IPR018392 LysM domain LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 Gene3D G3DSA:3.40.630.40 333 408 3.7E-57 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 Gene3D G3DSA:3.40.630.40 184 281 3.7E-57 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 Pfam PF11741 AMIN domain 29 121 6.8E-7 T 22-04-2016 IPR021731 AMIN domain LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 PANTHER PTHR30404 1 438 2.9E-204 T 22-04-2016 LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 SUPERFAMILY SSF53187 332 408 3.77E-51 T 22-04-2016 LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 SUPERFAMILY SSF53187 184 280 3.77E-51 T 22-04-2016 LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 Gene3D G3DSA:3.10.350.10 506 551 6.4E-16 T 22-04-2016 IPR018392 LysM domain LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 Pfam PF01476 LysM domain 450 492 5.8E-13 T 22-04-2016 IPR018392 LysM domain LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 Pfam PF01476 LysM domain 508 550 1.4E-10 T 22-04-2016 IPR018392 LysM domain LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 186 405 2.0E-46 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 SUPERFAMILY SSF54106 448 492 3.01E-11 T 22-04-2016 IPR018392 LysM domain LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 SMART SM00257 507 550 5.7E-14 T 22-04-2016 IPR018392 LysM domain LK04_RS01325 fbc0c894c63fcf982801447a1b4962d3 552 SMART SM00257 449 492 2.0E-16 T 22-04-2016 IPR018392 LysM domain LK04_RS05375 c7447bfb30ee56c0a1470065fa502fc5 251 SUPERFAMILY SSF110997 172 245 3.79E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS05375 c7447bfb30ee56c0a1470065fa502fc5 251 Hamap MF_02022 Cell division protein DedD [dedD]. 10 250 27.451 T 22-04-2016 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 LK04_RS05375 c7447bfb30ee56c0a1470065fa502fc5 251 PANTHER PTHR38687:SF1 2 251 5.7E-57 T 22-04-2016 LK04_RS05375 c7447bfb30ee56c0a1470065fa502fc5 251 Pfam PF05036 Sporulation related domain 172 245 1.3E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS05375 c7447bfb30ee56c0a1470065fa502fc5 251 PANTHER PTHR38687 2 251 5.7E-57 T 22-04-2016 LK04_RS05375 c7447bfb30ee56c0a1470065fa502fc5 251 Gene3D G3DSA:3.30.70.1070 168 245 2.5E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS01705 404a4f4802f26fe71dae7f25cda069ce 328 Gene3D G3DSA:3.40.50.720 2 141 1.6E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01705 404a4f4802f26fe71dae7f25cda069ce 328 PANTHER PTHR22604 2 316 7.0E-142 T 22-04-2016 LK04_RS01705 404a4f4802f26fe71dae7f25cda069ce 328 Gene3D G3DSA:3.30.360.10 142 325 8.5E-68 T 22-04-2016 LK04_RS01705 404a4f4802f26fe71dae7f25cda069ce 328 SUPERFAMILY SSF55347 127 291 1.39E-24 T 22-04-2016 LK04_RS01705 404a4f4802f26fe71dae7f25cda069ce 328 PANTHER PTHR22604:SF76 2 316 7.0E-142 T 22-04-2016 LK04_RS01705 404a4f4802f26fe71dae7f25cda069ce 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 5.3E-27 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS01705 404a4f4802f26fe71dae7f25cda069ce 328 SUPERFAMILY SSF51735 2 151 5.52E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02095 6fbc4d5277bd4a4a6eca4c2ba7faca90 302 SUPERFAMILY SSF46689 191 241 2.07E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02095 6fbc4d5277bd4a4a6eca4c2ba7faca90 302 SUPERFAMILY SSF46689 243 293 4.03E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02095 6fbc4d5277bd4a4a6eca4c2ba7faca90 302 PANTHER PTHR11019 28 298 1.1E-145 T 22-04-2016 LK04_RS02095 6fbc4d5277bd4a4a6eca4c2ba7faca90 302 Gene3D G3DSA:1.10.10.60 191 244 1.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02095 6fbc4d5277bd4a4a6eca4c2ba7faca90 302 Pfam PF12833 Helix-turn-helix domain 213 288 6.5E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS02095 6fbc4d5277bd4a4a6eca4c2ba7faca90 302 PANTHER PTHR11019:SF134 28 298 1.1E-145 T 22-04-2016 LK04_RS02095 6fbc4d5277bd4a4a6eca4c2ba7faca90 302 Gene3D G3DSA:1.10.10.60 245 288 1.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02095 6fbc4d5277bd4a4a6eca4c2ba7faca90 302 SMART SM00342 207 290 4.6E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS02095 6fbc4d5277bd4a4a6eca4c2ba7faca90 302 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 178 2.5E-40 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal LK04_RS18035 0f20bf7ed7a73e2fef765487bc87780e 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 154 1.2E-15 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain LK04_RS18035 0f20bf7ed7a73e2fef765487bc87780e 156 PANTHER PTHR12418 1 155 1.1E-75 T 22-04-2016 LK04_RS18035 0f20bf7ed7a73e2fef765487bc87780e 156 SUPERFAMILY SSF54637 12 155 1.3E-25 T 22-04-2016 IPR029069 HotDog domain LK04_RS18035 0f20bf7ed7a73e2fef765487bc87780e 156 Gene3D G3DSA:3.10.129.10 19 155 2.4E-31 T 22-04-2016 IPR029069 HotDog domain LK04_RS18035 0f20bf7ed7a73e2fef765487bc87780e 156 Pfam PF03061 Thioesterase superfamily 58 146 3.0E-18 T 22-04-2016 IPR006683 Thioesterase domain LK04_RS18035 0f20bf7ed7a73e2fef765487bc87780e 156 PANTHER PTHR12418:SF35 1 155 1.1E-75 T 22-04-2016 LK04_RS10930 6ae6089620b52706d43b627690f075d4 547 SUPERFAMILY SSF117457 361 536 9.29E-61 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LK04_RS10930 6ae6089620b52706d43b627690f075d4 547 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 8.4E-84 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 LK04_RS10930 6ae6089620b52706d43b627690f075d4 547 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 6.0E-30 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 LK04_RS10930 6ae6089620b52706d43b627690f075d4 547 Gene3D G3DSA:3.20.130.10 348 537 2.4E-74 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LK04_RS10930 6ae6089620b52706d43b627690f075d4 547 PIRSF PIRSF001394 30 547 3.7E-229 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS10930 6ae6089620b52706d43b627690f075d4 547 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LK04_RS10930 6ae6089620b52706d43b627690f075d4 547 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 374 537 2.7E-62 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LK04_RS10930 6ae6089620b52706d43b627690f075d4 547 PANTHER PTHR30389 2 547 0.0 T 22-04-2016 LK04_RS10930 6ae6089620b52706d43b627690f075d4 547 Pfam PF05683 Fumarase C-terminus 332 537 4.8E-92 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LK04_RS10930 6ae6089620b52706d43b627690f075d4 547 PANTHER PTHR30389:SF6 2 547 0.0 T 22-04-2016 LK04_RS10590 f0972ee697302fbbafb315ea59d7ed40 338 Gene3D G3DSA:1.10.10.60 280 328 4.5E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10590 f0972ee697302fbbafb315ea59d7ed40 338 SUPERFAMILY SSF46689 279 327 2.11E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10590 f0972ee697302fbbafb315ea59d7ed40 338 Pfam PF12833 Helix-turn-helix domain 249 327 4.9E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS10590 f0972ee697302fbbafb315ea59d7ed40 338 PANTHER PTHR11019 152 164 2.3E-23 T 22-04-2016 LK04_RS10590 f0972ee697302fbbafb315ea59d7ed40 338 PANTHER PTHR11019 209 334 2.3E-23 T 22-04-2016 LK04_RS10590 f0972ee697302fbbafb315ea59d7ed40 338 SMART SM00342 243 326 2.3E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS10590 f0972ee697302fbbafb315ea59d7ed40 338 Gene3D G3DSA:1.10.10.60 240 279 5.8E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS11345 f5c44c55643c32a905c2d65c8c93a39b 1107 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1069 1105 9.7E-19 T 22-04-2016 IPR021968 Polyribonucleotide phosphorylase C-terminal LK04_RS11345 f5c44c55643c32a905c2d65c8c93a39b 1107 PANTHER PTHR30001:SF1 1 853 0.0 T 22-04-2016 LK04_RS11345 f5c44c55643c32a905c2d65c8c93a39b 1107 PANTHER PTHR30001 1 853 0.0 T 22-04-2016 LK04_RS11345 f5c44c55643c32a905c2d65c8c93a39b 1107 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.0E-170 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 LK04_RS11345 f5c44c55643c32a905c2d65c8c93a39b 1107 Gene3D G3DSA:2.40.50.140 31 124 4.1E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS11345 f5c44c55643c32a905c2d65c8c93a39b 1107 Pfam PF00575 S1 RNA binding domain 36 118 1.3E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS11345 f5c44c55643c32a905c2d65c8c93a39b 1107 SUPERFAMILY SSF50249 40 124 1.31E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS11345 f5c44c55643c32a905c2d65c8c93a39b 1107 Hamap MF_00970 Ribonuclease E [rne]. 1 1094 38.293 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 LK04_RS11345 f5c44c55643c32a905c2d65c8c93a39b 1107 Pfam PF10150 Ribonuclease E/G family 121 391 5.4E-93 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 LK04_RS11345 f5c44c55643c32a905c2d65c8c93a39b 1107 SMART SM00316 37 119 3.7E-12 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS06940 cc61e25f4b7e5dccbf0675d7fae19874 454 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 453 7.2E-192 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS06940 cc61e25f4b7e5dccbf0675d7fae19874 454 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 373 2.8E-72 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS06940 cc61e25f4b7e5dccbf0675d7fae19874 454 SMART SM00382 174 357 3.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06940 cc61e25f4b7e5dccbf0675d7fae19874 454 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS06940 cc61e25f4b7e5dccbf0675d7fae19874 454 PANTHER PTHR15184:SF9 6 445 1.3E-234 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS06940 cc61e25f4b7e5dccbf0675d7fae19874 454 PANTHER PTHR15184 6 445 1.3E-234 T 22-04-2016 LK04_RS06940 cc61e25f4b7e5dccbf0675d7fae19874 454 SUPERFAMILY SSF52540 110 379 5.43E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06940 cc61e25f4b7e5dccbf0675d7fae19874 454 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 30 451 1.2E-196 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS06940 cc61e25f4b7e5dccbf0675d7fae19874 454 Gene3D G3DSA:3.40.50.300 140 423 2.8E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01060 ab2fc31184463af6f77fd2966445979f 272 PANTHER PTHR21089 1 272 3.3E-142 T 22-04-2016 LK04_RS01060 ab2fc31184463af6f77fd2966445979f 272 Gene3D G3DSA:3.40.50.720 108 244 8.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01060 ab2fc31184463af6f77fd2966445979f 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 1.1E-22 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS01060 ab2fc31184463af6f77fd2966445979f 272 SUPERFAMILY SSF51735 102 269 3.12E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01060 ab2fc31184463af6f77fd2966445979f 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 33.059 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS01060 ab2fc31184463af6f77fd2966445979f 272 PANTHER PTHR21089:SF2 1 272 3.3E-142 T 22-04-2016 LK04_RS01060 ab2fc31184463af6f77fd2966445979f 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 2.7E-95 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS01060 ab2fc31184463af6f77fd2966445979f 272 SUPERFAMILY SSF53223 2 101 6.33E-31 T 22-04-2016 LK04_RS01060 ab2fc31184463af6f77fd2966445979f 272 Gene3D G3DSA:3.40.192.10 1 107 2.8E-36 T 22-04-2016 LK04_RS01060 ab2fc31184463af6f77fd2966445979f 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 190 1.1E-11 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 61.314 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 SUPERFAMILY SSF53901 262 386 6.49E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 PANTHER PTHR18919:SF69 1 387 5.1E-207 T 22-04-2016 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 Gene3D G3DSA:3.40.47.10 268 386 1.3E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 Gene3D G3DSA:3.40.47.10 142 183 1.3E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 1.3E-232 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 2.3E-85 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 6.8E-147 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 Gene3D G3DSA:3.40.47.10 4 126 4.4E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 Gene3D G3DSA:3.40.47.10 184 267 4.4E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.0E-50 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 PIRSF PIRSF000429 1 387 6.0E-134 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 PANTHER PTHR18919 1 387 5.1E-207 T 22-04-2016 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 SUPERFAMILY SSF53901 1 259 1.23E-81 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS17900 8fb5267a6e93970ef2100d322b85bbe8 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 LK04_RS03585 ca931172a78795f18ac902ad729ca090 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 3.6E-31 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LK04_RS03585 ca931172a78795f18ac902ad729ca090 61 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LK04_RS03585 ca931172a78795f18ac902ad729ca090 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.442 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LK04_RS03585 ca931172a78795f18ac902ad729ca090 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LK04_RS03585 ca931172a78795f18ac902ad729ca090 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 22-04-2016 LK04_RS03585 ca931172a78795f18ac902ad729ca090 61 PANTHER PTHR34984 1 61 2.0E-33 T 22-04-2016 LK04_RS03585 ca931172a78795f18ac902ad729ca090 61 PANTHER PTHR34984:SF1 1 61 2.0E-33 T 22-04-2016 LK04_RS03950 7504565cbba4d6f3ad0eeee2ddfd88fe 96 PANTHER PTHR37483:SF1 1 93 1.8E-40 T 22-04-2016 LK04_RS03950 7504565cbba4d6f3ad0eeee2ddfd88fe 96 Pfam PF03658 RnfH family Ubiquitin 4 86 4.3E-35 T 22-04-2016 IPR005346 RnfH protein LK04_RS03950 7504565cbba4d6f3ad0eeee2ddfd88fe 96 SUPERFAMILY SSF54285 4 78 3.23E-26 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LK04_RS03950 7504565cbba4d6f3ad0eeee2ddfd88fe 96 PANTHER PTHR37483 1 93 1.8E-40 T 22-04-2016 LK04_RS03950 7504565cbba4d6f3ad0eeee2ddfd88fe 96 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 25.73 T 22-04-2016 IPR005346 RnfH protein LK04_RS03950 7504565cbba4d6f3ad0eeee2ddfd88fe 96 Gene3D G3DSA:3.10.20.280 3 88 1.6E-37 T 22-04-2016 IPR005346 RnfH protein LK04_RS15460 64a11ba9d7a79ca1f911b445266fbdd0 163 SUPERFAMILY SSF55021 79 162 2.03E-25 T 22-04-2016 LK04_RS15460 64a11ba9d7a79ca1f911b445266fbdd0 163 Gene3D G3DSA:3.30.70.260 1 76 5.0E-36 T 22-04-2016 LK04_RS15460 64a11ba9d7a79ca1f911b445266fbdd0 163 SUPERFAMILY SSF55021 2 74 2.39E-22 T 22-04-2016 LK04_RS15460 64a11ba9d7a79ca1f911b445266fbdd0 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 1.0E-36 T 22-04-2016 LK04_RS15460 64a11ba9d7a79ca1f911b445266fbdd0 163 Pfam PF01842 ACT domain 4 68 3.0E-15 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LK04_RS15460 64a11ba9d7a79ca1f911b445266fbdd0 163 PANTHER PTHR30239 1 160 3.1E-95 T 22-04-2016 LK04_RS15460 64a11ba9d7a79ca1f911b445266fbdd0 163 Gene3D G3DSA:3.30.70.1150 83 162 8.1E-27 T 22-04-2016 LK04_RS15460 64a11ba9d7a79ca1f911b445266fbdd0 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 9.8E-68 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS15460 64a11ba9d7a79ca1f911b445266fbdd0 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.7E-23 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS04050 154861ce5e6e1d2a7645991703926f4d 126 Gene3D G3DSA:3.90.470.20 1 125 1.5E-40 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS04050 154861ce5e6e1d2a7645991703926f4d 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 25.21 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS04050 154861ce5e6e1d2a7645991703926f4d 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 2.3E-23 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS04050 154861ce5e6e1d2a7645991703926f4d 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 125 1.3E-50 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS04050 154861ce5e6e1d2a7645991703926f4d 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 4.1E-35 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS04050 154861ce5e6e1d2a7645991703926f4d 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 125 4.0E-35 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS04050 154861ce5e6e1d2a7645991703926f4d 126 SUPERFAMILY SSF56214 3 125 9.42E-29 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 PANTHER PTHR10804:SF75 1 263 6.1E-184 T 22-04-2016 LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 3.6E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 3.6E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 3.6E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 3.6E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 Gene3D G3DSA:3.90.230.10 3 257 1.3E-101 T 22-04-2016 IPR000994 Peptidase M24, structural domain LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 PANTHER PTHR10804 1 263 6.1E-184 T 22-04-2016 LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 SUPERFAMILY SSF55920 3 254 5.5E-93 T 22-04-2016 IPR000994 Peptidase M24, structural domain LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 9.9E-108 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.485 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LK04_RS14990 080b81be6c3d03062914a47c880e319f 264 Pfam PF00557 Metallopeptidase family M24 12 242 1.4E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 PANTHER PTHR16254 1 557 2.4E-256 T 22-04-2016 LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 PRINTS PR00335 TrkA potassium uptake protein signature 402 416 7.9E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 PRINTS PR00335 TrkA potassium uptake protein signature 419 433 7.9E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 PRINTS PR00335 TrkA potassium uptake protein signature 448 458 7.9E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 PRINTS PR00335 TrkA potassium uptake protein signature 459 469 7.9E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 Gene3D G3DSA:3.40.50.720 397 531 4.8E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 Pfam PF02254 TrkA-N domain 403 513 7.8E-26 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 1.4E-90 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 SUPERFAMILY SSF51735 402 530 5.78E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 Pfam PF00999 Sodium/hydrogen exchanger family 12 373 4.9E-69 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 47.548 T 22-04-2016 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 LK04_RS00790 9015a5440061c6a8dfa853f956522589 600 PANTHER PTHR16254:SF6 1 557 2.4E-256 T 22-04-2016 LK04_RS10370 57fca9b8e035d866b7ca4ac5aa359843 124 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 18 123 4.9E-43 T 22-04-2016 IPR011298 FeS assembly scaffold SufA GO:0016226 LK04_RS10370 57fca9b8e035d866b7ca4ac5aa359843 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 7.6E-19 T 22-04-2016 IPR000361 FeS cluster biogenesis LK04_RS10370 57fca9b8e035d866b7ca4ac5aa359843 124 PANTHER PTHR10072 1 124 2.4E-71 T 22-04-2016 LK04_RS10370 57fca9b8e035d866b7ca4ac5aa359843 124 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site LK04_RS10370 57fca9b8e035d866b7ca4ac5aa359843 124 SUPERFAMILY SSF89360 19 112 4.71E-27 T 22-04-2016 IPR000361 FeS cluster biogenesis LK04_RS10370 57fca9b8e035d866b7ca4ac5aa359843 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 4.1E-32 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 LK04_RS10370 57fca9b8e035d866b7ca4ac5aa359843 124 Gene3D G3DSA:2.60.300.12 19 112 2.9E-29 T 22-04-2016 IPR000361 FeS cluster biogenesis LK04_RS10370 57fca9b8e035d866b7ca4ac5aa359843 124 PANTHER PTHR10072:SF47 1 124 2.4E-71 T 22-04-2016 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 175 278 1.0E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 Gene3D G3DSA:1.10.760.10 172 284 7.0E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 SUPERFAMILY SSF46626 177 286 5.88E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 Gene3D G3DSA:1.10.760.10 27 129 2.5E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 PIRSF PIRSF000018 1 416 7.3E-145 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 SUPERFAMILY SSF46626 310 413 2.26E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 PANTHER PTHR35008 20 415 3.7E-143 T 22-04-2016 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 PRINTS PR00605 Class IC cytochrome C signature 317 328 4.7E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 PRINTS PR00605 Class IC cytochrome C signature 370 392 4.7E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 PANTHER PTHR35008:SF3 20 415 3.7E-143 T 22-04-2016 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 SUPERFAMILY SSF46626 27 152 4.62E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 Pfam PF00034 Cytochrome c 40 129 4.2E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 Pfam PF00034 Cytochrome c 310 394 1.8E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS16215 19ace03a104066fe5daad7e80572b47a 416 Gene3D G3DSA:1.10.760.10 310 414 1.8E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS00820 2a42f0ffbaa9683eb9e2d52e89458eeb 128 Gene3D G3DSA:3.40.1260.10 1 128 4.4E-26 T 22-04-2016 IPR027396 DsrEFH-like LK04_RS00820 2a42f0ffbaa9683eb9e2d52e89458eeb 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 38.613 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 LK04_RS00820 2a42f0ffbaa9683eb9e2d52e89458eeb 128 SUPERFAMILY SSF75169 1 128 7.06E-36 T 22-04-2016 IPR027396 DsrEFH-like LK04_RS00820 2a42f0ffbaa9683eb9e2d52e89458eeb 128 Pfam PF02635 DsrE/DsrF-like family 1 128 2.0E-26 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein LK04_RS00820 2a42f0ffbaa9683eb9e2d52e89458eeb 128 PANTHER PTHR34874 1 128 2.6E-57 T 22-04-2016 LK04_RS00820 2a42f0ffbaa9683eb9e2d52e89458eeb 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 1.7E-51 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 LK04_RS00820 2a42f0ffbaa9683eb9e2d52e89458eeb 128 PANTHER PTHR34874:SF1 1 128 2.6E-57 T 22-04-2016 LK04_RS15540 c35d8652b6a040e0f3353626b20011a7 792 Pfam PF03968 OstA-like protein 53 194 4.4E-29 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal LK04_RS15540 c35d8652b6a040e0f3353626b20011a7 792 Gene3D G3DSA:2.60.450.10 48 209 6.6E-25 T 22-04-2016 LK04_RS15540 c35d8652b6a040e0f3353626b20011a7 792 Pfam PF04453 Organic solvent tolerance protein 312 707 9.1E-101 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 LK04_RS15540 c35d8652b6a040e0f3353626b20011a7 792 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 8 771 21.103 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 LK04_RS15540 c35d8652b6a040e0f3353626b20011a7 792 PANTHER PTHR30189 1 789 8.2E-120 T 22-04-2016 LK04_RS08290 3cba697187a8febe736ba0875a6f8241 107 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 7 107 2.2E-38 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 LK04_RS08290 3cba697187a8febe736ba0875a6f8241 107 Gene3D G3DSA:3.30.780.10 27 107 5.2E-35 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 LK04_RS08290 3cba697187a8febe736ba0875a6f8241 107 PANTHER PTHR12789 4 107 3.3E-36 T 22-04-2016 LK04_RS08290 3cba697187a8febe736ba0875a6f8241 107 PIRSF PIRSF037511 1 107 7.5E-35 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 LK04_RS08290 3cba697187a8febe736ba0875a6f8241 107 Pfam PF01253 Translation initiation factor SUI1 31 100 7.5E-18 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 LK04_RS08290 3cba697187a8febe736ba0875a6f8241 107 SUPERFAMILY SSF55159 6 103 5.49E-25 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 SUPERFAMILY SSF56059 481 687 3.93E-29 T 22-04-2016 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 Pfam PF13380 CoA binding domain 13 129 8.1E-21 T 22-04-2016 IPR003781 CoA-binding GO:0048037 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 279 6.4E-44 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 SUPERFAMILY SSF52210 287 447 2.09E-35 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 Pfam PF13549 ATP-grasp domain 472 694 5.5E-76 T 22-04-2016 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 SUPERFAMILY SSF55729 617 865 3.14E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 Gene3D G3DSA:3.40.50.261 285 437 1.2E-14 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 PANTHER PTHR11117 29 699 3.9E-229 T 22-04-2016 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 SUPERFAMILY SSF51735 2 136 6.57E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 Gene3D G3DSA:3.40.50.261 129 279 6.2E-25 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 Gene3D G3DSA:3.40.630.30 719 877 2.0E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 SUPERFAMILY SSF52210 125 285 1.05E-36 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 SMART SM00881 9 104 4.9E-26 T 22-04-2016 IPR003781 CoA-binding GO:0048037 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 Gene3D G3DSA:3.30.470.20 487 602 6.5E-5 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 PANTHER PTHR11117:SF8 29 699 3.9E-229 T 22-04-2016 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 Pfam PF00583 Acetyltransferase (GNAT) family 791 864 1.7E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS03755 74cbbfda99e78906d27ab89da003d417 885 Gene3D G3DSA:3.40.50.720 1 128 1.1E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16615 f8742ccab4f71097387dbcd8648522c2 190 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.63 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 LK04_RS16615 f8742ccab4f71097387dbcd8648522c2 190 PIRSF PIRSF028513 1 187 2.9E-42 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 LK04_RS16615 f8742ccab4f71097387dbcd8648522c2 190 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 183 4.5E-56 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 LK04_RS16615 f8742ccab4f71097387dbcd8648522c2 190 PANTHER PTHR37481:SF1 2 189 3.0E-64 T 22-04-2016 LK04_RS16615 f8742ccab4f71097387dbcd8648522c2 190 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 184 4.6E-55 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related LK04_RS16615 f8742ccab4f71097387dbcd8648522c2 190 PANTHER PTHR37481 2 189 3.0E-64 T 22-04-2016 LK04_RS17305 bf94ed61f5475dfac6c30142afde5e38 327 PANTHER PTHR11695:SF605 16 327 6.3E-128 T 22-04-2016 LK04_RS17305 bf94ed61f5475dfac6c30142afde5e38 327 SUPERFAMILY SSF51735 113 273 2.21E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS17305 bf94ed61f5475dfac6c30142afde5e38 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 LK04_RS17305 bf94ed61f5475dfac6c30142afde5e38 327 Pfam PF00107 Zinc-binding dehydrogenase 152 257 5.1E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS17305 bf94ed61f5475dfac6c30142afde5e38 327 Gene3D G3DSA:3.90.180.10 3 146 1.4E-43 T 22-04-2016 IPR011032 GroES-like LK04_RS17305 bf94ed61f5475dfac6c30142afde5e38 327 SUPERFAMILY SSF50129 3 143 1.57E-35 T 22-04-2016 IPR011032 GroES-like LK04_RS17305 bf94ed61f5475dfac6c30142afde5e38 327 PANTHER PTHR11695 16 327 6.3E-128 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS17305 bf94ed61f5475dfac6c30142afde5e38 327 Gene3D G3DSA:3.40.50.720 147 256 4.3E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS17305 bf94ed61f5475dfac6c30142afde5e38 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 9.3E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS17305 bf94ed61f5475dfac6c30142afde5e38 327 SMART SM00829 11 325 2.9E-28 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 PANTHER PTHR23403 4 547 2.0E-298 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 Pfam PF01204 Trehalase 71 547 8.6E-157 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 Hamap MF_01059 Cytoplasmic trehalase [treF]. 34 549 78.871 T 22-04-2016 IPR023715 Trehalase, cytoplasmic GO:0004555|GO:0005737|GO:0005993|GO:0071474 KEGG: 00500+3.2.1.28|UniPathway: UPA00300 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 SUPERFAMILY SSF48208 55 547 2.47E-147 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 ProSitePatterns PS00927 Trehalase signature 1. 165 178 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 PRINTS PR00744 Glycosyl hydrolase family 37 signature 281 298 2.2E-44 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 PRINTS PR00744 Glycosyl hydrolase family 37 signature 389 405 2.2E-44 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 PRINTS PR00744 Glycosyl hydrolase family 37 signature 452 468 2.2E-44 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 PRINTS PR00744 Glycosyl hydrolase family 37 signature 346 363 2.2E-44 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 PRINTS PR00744 Glycosyl hydrolase family 37 signature 530 543 2.2E-44 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 PRINTS PR00744 Glycosyl hydrolase family 37 signature 207 225 2.2E-44 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 PRINTS PR00744 Glycosyl hydrolase family 37 signature 314 331 2.2E-44 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 PANTHER PTHR23403:SF8 4 547 2.0E-298 T 22-04-2016 LK04_RS02535 6552e047f55adfdc3c062131c90755ab 552 ProSitePatterns PS00928 Trehalase signature 2. 459 468 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 Gene3D G3DSA:3.20.20.100 1 259 1.4E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 Pfam PF00248 Aldo/keto reductase family 10 250 7.9E-46 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 PANTHER PTHR11732 1 267 1.0E-157 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 PANTHER PTHR11732:SF100 1 267 1.0E-157 T 22-04-2016 LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 PIRSF PIRSF000097 1 265 4.3E-70 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 SUPERFAMILY SSF51430 2 258 1.31E-80 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 2.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 2.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 2.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 2.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS14805 c9f3dd2dba2c3992898445464a135416 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 2.0E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.7E-62 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.7E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.7E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.7E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.7E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.7E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 1.8E-49 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.215 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 PANTHER PTHR11910 8 176 3.9E-55 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 Gene3D G3DSA:1.10.520.20 3 104 1.9E-33 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain LK04_RS19020 f6ef196f47115581af8793ed015367d1 177 SUPERFAMILY SSF47928 3 104 6.41E-26 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 SUPERFAMILY SSF82866 839 1031 1.07E-43 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.7E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 3.7E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 3.7E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 3.7E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 3.7E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.7E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 3.7E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 3.7E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 3.7E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 SUPERFAMILY SSF82693 813 861 1.23E-25 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 SUPERFAMILY SSF82714 184 273 7.98E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 Gene3D G3DSA:3.30.70.1430 39 142 4.3E-33 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 SUPERFAMILY SSF82693 673 722 1.23E-25 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 SUPERFAMILY SSF82693 566 672 1.46E-30 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PANTHER PTHR32063 1 1034 0.0 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 SUPERFAMILY SSF82693 39 133 2.3E-24 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 SUPERFAMILY SSF82714 723 813 9.81E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 Gene3D G3DSA:3.30.2090.10 723 813 2.8E-26 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 SUPERFAMILY SSF82866 298 499 2.09E-50 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 SUPERFAMILY SSF82693 137 184 5.23E-22 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 SUPERFAMILY SSF82693 276 332 5.23E-22 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 Gene3D G3DSA:3.30.70.1430 568 672 2.9E-36 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 PANTHER PTHR32063:SF13 1 1034 0.0 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 Gene3D G3DSA:1.10.3850.10 284 501 1.1E-59 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 Gene3D G3DSA:1.10.3850.10 819 1032 3.0E-54 T 22-04-2016 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 Gene3D G3DSA:3.30.2090.10 183 277 2.1E-29 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1048 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 LK04_RS09155 342fb4ad247f3da8ef896fd3f1a9b5d2 1053 Pfam PF00873 AcrB/AcrD/AcrF family 3 1031 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.35 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PANTHER PTHR11946:SF7 240 571 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PANTHER PTHR11946:SF7 615 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Gene3D G3DSA:3.90.740.10 223 424 6.0E-60 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 6.2E-77 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 SUPERFAMILY SSF52374 416 668 3.83E-141 T 22-04-2016 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 SUPERFAMILY SSF52374 5 226 3.83E-141 T 22-04-2016 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 572 1.6E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 1.1E-27 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 8.4E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 SUPERFAMILY SSF47323 662 859 6.35E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Gene3D G3DSA:1.10.730.10 648 795 2.6E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Pfam PF08264 Anticodon-binding domain of tRNA 700 822 2.0E-15 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Gene3D G3DSA:3.40.50.620 425 573 2.6E-151 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Gene3D G3DSA:3.40.50.620 4 222 2.6E-151 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 Gene3D G3DSA:3.40.50.620 618 647 2.6E-151 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PANTHER PTHR11946 240 571 0.0 T 22-04-2016 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PANTHER PTHR11946 615 859 0.0 T 22-04-2016 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 8.1E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 8.1E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 8.1E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 8.1E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 8.1E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 8.1E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 8.1E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LK04_RS13350 26e9a94a48715841dddfa4fa044979a0 860 SUPERFAMILY SSF50677 226 415 1.02E-55 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LK04_RS17640 a630619c4f165632111a84dcda555506 215 Gene3D G3DSA:2.40.360.10 16 214 8.6E-79 T 22-04-2016 IPR023373 YmcC-like domain LK04_RS17640 a630619c4f165632111a84dcda555506 215 SUPERFAMILY SSF159270 19 213 4.05E-62 T 22-04-2016 IPR023373 YmcC-like domain LK04_RS17640 a630619c4f165632111a84dcda555506 215 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 13 210 4.7E-69 T 22-04-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB LK04_RS18585 1677db42456418e2d004c413196d7fc2 298 Gene3D G3DSA:3.40.190.10 138 235 2.4E-13 T 22-04-2016 LK04_RS18585 1677db42456418e2d004c413196d7fc2 298 SUPERFAMILY SSF53850 59 285 3.63E-29 T 22-04-2016 LK04_RS18585 1677db42456418e2d004c413196d7fc2 298 SMART SM00062 59 288 5.0E-11 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS18585 1677db42456418e2d004c413196d7fc2 298 Gene3D G3DSA:3.40.190.10 59 137 5.9E-13 T 22-04-2016 LK04_RS18585 1677db42456418e2d004c413196d7fc2 298 Gene3D G3DSA:3.40.190.10 247 286 5.9E-13 T 22-04-2016 LK04_RS18585 1677db42456418e2d004c413196d7fc2 298 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 80 285 1.7E-26 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 PANTHER PTHR24322 147 179 1.4E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 PANTHER PTHR24322 9 127 1.4E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.5E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.5E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.5E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.5E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 SUPERFAMILY SSF51735 5 225 3.01E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 Pfam PF00106 short chain dehydrogenase 5 186 3.5E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 PANTHER PTHR24322:SF343 147 179 1.4E-30 T 22-04-2016 LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 PANTHER PTHR24322:SF343 9 127 1.4E-30 T 22-04-2016 LK04_RS03900 78c2b08c3c5e481f3030ce19eba9a6f5 225 Gene3D G3DSA:3.40.50.720 4 225 3.6E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 SUPERFAMILY SSF53067 249 475 7.89E-33 T 22-04-2016 LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 PIRSF PIRSF000538 3 493 3.4E-45 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 7 459 1.0E-217 T 22-04-2016 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5|UniPathway: UPA00541 LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 Gene3D G3DSA:3.30.420.40 253 478 5.9E-18 T 22-04-2016 LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 439 2.2E-24 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 243 1.8E-34 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 Hamap MF_01535 Rhamnulokinase [rhaB]. 6 482 51.416 T 22-04-2016 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5|UniPathway: UPA00541 LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 PANTHER PTHR10196:SF6 1 477 3.9E-212 T 22-04-2016 LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 SUPERFAMILY SSF53067 6 245 4.92E-50 T 22-04-2016 LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 PANTHER PTHR10196 1 477 3.9E-212 T 22-04-2016 LK04_RS08670 fcba288c8de6e77c32cb385487dd5826 493 Gene3D G3DSA:3.30.420.40 1 242 2.8E-32 T 22-04-2016 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 Gene3D G3DSA:3.30.70.141 1 140 3.2E-60 T 22-04-2016 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 PANTHER PTHR11349 1 143 4.9E-79 T 22-04-2016 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.614 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 SMART SM00562 3 140 2.8E-87 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 SUPERFAMILY SSF54919 1 141 6.15E-60 T 22-04-2016 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.2E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.2E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.2E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.2E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.2E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS04180 6c24338d4cabb9fe834fb9fc1f583117 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.4E-56 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS07430 615e9b173d500a9593fa747aa2fbc7f2 250 PANTHER PTHR24220 6 249 3.3E-151 T 22-04-2016 LK04_RS07430 615e9b173d500a9593fa747aa2fbc7f2 250 SUPERFAMILY SSF52540 4 227 1.12E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07430 615e9b173d500a9593fa747aa2fbc7f2 250 PANTHER PTHR24220:SF466 6 249 3.3E-151 T 22-04-2016 LK04_RS07430 615e9b173d500a9593fa747aa2fbc7f2 250 Pfam PF00005 ABC transporter 21 149 7.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS07430 615e9b173d500a9593fa747aa2fbc7f2 250 Gene3D G3DSA:3.40.50.300 3 213 8.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07430 615e9b173d500a9593fa747aa2fbc7f2 250 SMART SM00382 29 199 4.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS00175 970031caaa494feee5d73a5c482657e5 319 Gene3D G3DSA:3.40.50.720 7 123 8.2E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00175 970031caaa494feee5d73a5c482657e5 319 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 29 318 6.6E-24 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LK04_RS00175 970031caaa494feee5d73a5c482657e5 319 PANTHER PTHR10996 7 318 4.9E-114 T 22-04-2016 LK04_RS00175 970031caaa494feee5d73a5c482657e5 319 SUPERFAMILY SSF51735 107 288 4.68E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00175 970031caaa494feee5d73a5c482657e5 319 Gene3D G3DSA:3.40.50.720 124 290 7.6E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00175 970031caaa494feee5d73a5c482657e5 319 PANTHER PTHR10996:SF152 7 318 4.9E-114 T 22-04-2016 LK04_RS00175 970031caaa494feee5d73a5c482657e5 319 SUPERFAMILY SSF52283 9 139 1.29E-28 T 22-04-2016 LK04_RS00175 970031caaa494feee5d73a5c482657e5 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 287 1.8E-52 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS12610 051520514fa0a2a8111e3b19a6e2d906 273 Gene3D G3DSA:3.40.190.10 112 221 3.1E-17 T 22-04-2016 LK04_RS12610 051520514fa0a2a8111e3b19a6e2d906 273 SMART SM00062 33 262 2.0E-41 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12610 051520514fa0a2a8111e3b19a6e2d906 273 SUPERFAMILY SSF53850 1 262 8.45E-52 T 22-04-2016 LK04_RS12610 051520514fa0a2a8111e3b19a6e2d906 273 Gene3D G3DSA:3.40.190.10 222 261 1.2E-34 T 22-04-2016 LK04_RS12610 051520514fa0a2a8111e3b19a6e2d906 273 Gene3D G3DSA:3.40.190.10 31 111 1.2E-34 T 22-04-2016 LK04_RS12610 051520514fa0a2a8111e3b19a6e2d906 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 259 1.0E-52 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12610 051520514fa0a2a8111e3b19a6e2d906 273 PANTHER PTHR18966:SF191 13 258 1.2E-35 T 22-04-2016 LK04_RS12610 051520514fa0a2a8111e3b19a6e2d906 273 PANTHER PTHR18966 13 258 1.2E-35 T 22-04-2016 LK04_RS17140 e8272375122f80f1aee01c535c79bb9c 2027 Gene3D G3DSA:2.40.128.130 1706 2027 2.6E-62 T 22-04-2016 IPR005546 Autotransporter beta-domain LK04_RS17140 e8272375122f80f1aee01c535c79bb9c 2027 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1537 2027 1.7E-64 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 LK04_RS17140 e8272375122f80f1aee01c535c79bb9c 2027 SUPERFAMILY SSF51126 1247 1647 2.98E-11 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor LK04_RS17140 e8272375122f80f1aee01c535c79bb9c 2027 SMART SM00869 1748 2014 5.2E-40 T 22-04-2016 IPR005546 Autotransporter beta-domain LK04_RS17140 e8272375122f80f1aee01c535c79bb9c 2027 Gene3D G3DSA:2.160.20.20 1408 1647 2.4E-11 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like LK04_RS17140 e8272375122f80f1aee01c535c79bb9c 2027 Gene3D G3DSA:2.160.20.20 740 1121 6.9E-5 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like LK04_RS17140 e8272375122f80f1aee01c535c79bb9c 2027 Gene3D G3DSA:2.160.20.20 1229 1367 2.4E-11 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like LK04_RS17140 e8272375122f80f1aee01c535c79bb9c 2027 Pfam PF03797 Autotransporter beta-domain 1750 2010 1.1E-40 T 22-04-2016 IPR005546 Autotransporter beta-domain LK04_RS17140 e8272375122f80f1aee01c535c79bb9c 2027 SUPERFAMILY SSF103515 1720 2027 1.31E-48 T 22-04-2016 IPR005546 Autotransporter beta-domain LK04_RS15220 4371fe7bc39f3fc6fcbb97fd8fe8f2f9 347 SUPERFAMILY SSF102198 157 346 2.09E-12 T 22-04-2016 LK04_RS15220 4371fe7bc39f3fc6fcbb97fd8fe8f2f9 347 Pfam PF04199 Putative cyclase 81 274 7.1E-15 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 LK04_RS15220 4371fe7bc39f3fc6fcbb97fd8fe8f2f9 347 PANTHER PTHR34861 3 347 3.8E-52 T 22-04-2016 LK04_RS15220 4371fe7bc39f3fc6fcbb97fd8fe8f2f9 347 Gene3D G3DSA:3.50.30.50 173 347 1.9E-20 T 22-04-2016 LK04_RS15220 4371fe7bc39f3fc6fcbb97fd8fe8f2f9 347 Gene3D G3DSA:3.50.30.50 93 139 1.9E-20 T 22-04-2016 LK04_RS01530 6af4ca135e3e07256d25ceedbd36fff4 128 SUPERFAMILY SSF47175 23 128 4.94E-29 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 LK04_RS01530 6af4ca135e3e07256d25ceedbd36fff4 128 Gene3D G3DSA:1.20.120.10 23 128 6.6E-37 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 LK04_RS01530 6af4ca135e3e07256d25ceedbd36fff4 128 Pfam PF07361 Cytochrome b562 24 128 1.7E-31 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 LK04_RS01530 6af4ca135e3e07256d25ceedbd36fff4 128 PIRSF PIRSF000029 1 128 3.1E-40 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 PIRSF PIRSF000018 1 434 4.8E-181 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 Gene3D G3DSA:1.10.760.10 316 425 2.0E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 SUPERFAMILY SSF46626 173 288 3.94E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 PRINTS PR00605 Class IC cytochrome C signature 376 398 5.6E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 PRINTS PR00605 Class IC cytochrome C signature 323 334 5.6E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 Gene3D G3DSA:1.10.760.10 173 288 6.2E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 Gene3D G3DSA:1.10.760.10 25 127 9.2E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 315 398 4.9E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 SUPERFAMILY SSF46626 17 151 6.48E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 Pfam PF00034 Cytochrome c 29 127 1.7E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 PANTHER PTHR35008:SF3 17 421 4.3E-202 T 22-04-2016 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 PANTHER PTHR35008 17 421 4.3E-202 T 22-04-2016 LK04_RS17090 a0ef9aec7d9ba22c8f928e0142440a17 436 SUPERFAMILY SSF46626 317 419 4.87E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS09240 876840b252ed6814bfcd1e54e09dd3bf 537 SUPERFAMILY SSF49879 17 113 2.1E-12 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 LK04_RS09240 876840b252ed6814bfcd1e54e09dd3bf 537 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 16 523 2.5E-53 T 22-04-2016 IPR017735 Type VI secretion system, FHA domain-containing protein LK04_RS09240 876840b252ed6814bfcd1e54e09dd3bf 537 Pfam PF00498 FHA domain 27 95 1.8E-6 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 LK04_RS09240 876840b252ed6814bfcd1e54e09dd3bf 537 Gene3D G3DSA:2.60.200.20 10 114 6.3E-9 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 Pfam PF00455 DeoR C terminal sensor domain 87 244 3.8E-46 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 SMART SM00420 6 58 8.1E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 PANTHER PTHR30363:SF11 1 262 2.5E-76 T 22-04-2016 LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 SMART SM01134 85 245 3.6E-56 T 22-04-2016 LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.9E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 Gene3D G3DSA:1.10.10.10 5 56 2.1E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 PANTHER PTHR30363 1 262 2.5E-76 T 22-04-2016 LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 SUPERFAMILY SSF46785 5 58 4.86E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.5E-10 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.5E-10 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 Gene3D G3DSA:3.40.50.1360 89 224 7.3E-8 T 22-04-2016 LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LK04_RS04555 cbc6c0f9a16ab5cf70b9e19bcdb23ebd 276 SUPERFAMILY SSF100950 87 244 4.35E-29 T 22-04-2016 LK04_RS03070 f0415d24a43d57fa0745cc598d2cec03 215 PANTHER PTHR31527 21 188 3.3E-17 T 22-04-2016 LK04_RS03070 f0415d24a43d57fa0745cc598d2cec03 215 Pfam PF09347 Domain of unknown function (DUF1989) 21 181 2.3E-34 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 633 2.6E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 PANTHER PTHR22893 5 419 4.0E-234 T 22-04-2016 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 PANTHER PTHR22893:SF25 5 419 4.0E-234 T 22-04-2016 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 Gene3D G3DSA:3.20.20.70 5 361 1.9E-118 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 Gene3D G3DSA:3.50.50.60 362 466 5.1E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 Gene3D G3DSA:3.50.50.60 472 620 7.3E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 614 628 2.6E-6 T 22-04-2016 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 378 400 2.6E-6 T 22-04-2016 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 499 517 2.8E-11 T 22-04-2016 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 398 2.8E-11 T 22-04-2016 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 613 629 2.8E-11 T 22-04-2016 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 332 3.3E-83 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 SUPERFAMILY SSF51395 4 364 3.66E-107 T 22-04-2016 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 SUPERFAMILY SSF51971 335 519 6.71E-44 T 22-04-2016 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 SUPERFAMILY SSF51905 551 645 2.59E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS01725 88e9aa01a0a782d609e382c71dfb0517 667 SUPERFAMILY SSF51905 462 520 2.59E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12950 d94e5f973fdfd6f7a788137360e8edd6 344 PIRSF PIRSF005096 1 344 8.5E-113 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 LK04_RS12950 d94e5f973fdfd6f7a788137360e8edd6 344 Gene3D G3DSA:2.70.98.10 9 342 1.1E-111 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LK04_RS12950 d94e5f973fdfd6f7a788137360e8edd6 344 PANTHER PTHR10091:SF0 1 344 9.6E-129 T 22-04-2016 LK04_RS12950 d94e5f973fdfd6f7a788137360e8edd6 344 Pfam PF01263 Aldose 1-epimerase 19 339 1.2E-81 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 LK04_RS12950 d94e5f973fdfd6f7a788137360e8edd6 344 PANTHER PTHR10091 1 344 9.6E-129 T 22-04-2016 LK04_RS12950 d94e5f973fdfd6f7a788137360e8edd6 344 SUPERFAMILY SSF74650 7 341 2.7E-100 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LK04_RS12950 d94e5f973fdfd6f7a788137360e8edd6 344 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 341 1.1E-133 T 22-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 LK04_RS12950 d94e5f973fdfd6f7a788137360e8edd6 344 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 169 178 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 LK04_RS18060 f4e0123cd146c02114f4bab1a7bbf61d 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 207 3.7E-14 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18060 f4e0123cd146c02114f4bab1a7bbf61d 238 PANTHER PTHR12725 1 238 4.2E-68 T 22-04-2016 LK04_RS18060 f4e0123cd146c02114f4bab1a7bbf61d 238 Gene3D G3DSA:3.40.50.1000 105 238 3.4E-29 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18060 f4e0123cd146c02114f4bab1a7bbf61d 238 Gene3D G3DSA:3.40.50.1000 9 65 8.9E-5 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18060 f4e0123cd146c02114f4bab1a7bbf61d 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 128 201 6.2E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS18060 f4e0123cd146c02114f4bab1a7bbf61d 238 SUPERFAMILY SSF56784 9 238 4.76E-40 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18060 f4e0123cd146c02114f4bab1a7bbf61d 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 168 188 2.5E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS18060 f4e0123cd146c02114f4bab1a7bbf61d 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.5E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS18060 f4e0123cd146c02114f4bab1a7bbf61d 238 PANTHER PTHR12725:SF65 1 238 4.2E-68 T 22-04-2016 LK04_RS02935 bdaa10e88554249e74149de597802aa1 199 PANTHER PTHR23407 1 199 3.3E-63 T 22-04-2016 LK04_RS02935 bdaa10e88554249e74149de597802aa1 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 9 190 1.7E-53 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LK04_RS02935 bdaa10e88554249e74149de597802aa1 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 9 190 2.8E-46 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LK04_RS02935 bdaa10e88554249e74149de597802aa1 199 Gene3D G3DSA:3.40.50.10420 9 196 6.0E-58 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain LK04_RS02935 bdaa10e88554249e74149de597802aa1 199 PIRSF PIRSF006806 6 193 4.2E-38 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LK04_RS02935 bdaa10e88554249e74149de597802aa1 199 SUPERFAMILY SSF100950 8 197 8.37E-56 T 22-04-2016 LK04_RS02935 bdaa10e88554249e74149de597802aa1 199 PANTHER PTHR23407:SF1 1 199 3.3E-63 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 Gene3D G3DSA:3.40.50.300 22 236 2.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 231 5.3E-45 T 22-04-2016 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 SUPERFAMILY SSF52540 21 236 2.74E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 53.405 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 1.4E-209 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 7.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 7.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 7.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 7.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 7.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 Gene3D G3DSA:2.40.30.10 346 435 1.3E-6 T 22-04-2016 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 213 1.3E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 SUPERFAMILY SSF50447 243 327 4.86E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 SUPERFAMILY SSF50465 335 434 1.58E-30 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 Gene3D G3DSA:2.40.30.10 244 345 3.6E-20 T 22-04-2016 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 PANTHER PTHR23115 32 54 1.2E-75 T 22-04-2016 LK04_RS03480 ac2cdab04751de028f8b719ca7aa4d98 475 PANTHER PTHR23115 74 360 1.2E-75 T 22-04-2016 LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 Gene3D G3DSA:3.40.50.1770 202 371 1.4E-49 T 22-04-2016 LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 2.2E-74 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 SMART SM01002 146 311 1.1E-84 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 Gene3D G3DSA:3.50.50.60 172 201 3.5E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 SMART SM01003 4 137 1.7E-71 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 427 509 1.0E-35 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 2.2E-50 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 SUPERFAMILY SSF52283 1 168 4.51E-55 T 22-04-2016 LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 PIRSF PIRSF000203 1 509 8.4E-276 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 3 510 2.8E-287 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 Gene3D G3DSA:3.40.50.1770 3 171 5.3E-72 T 22-04-2016 LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 SUPERFAMILY SSF51735 137 317 8.95E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08550 b73aefb2879b29fbfbc3258e62215b14 510 PANTHER PTHR10160 1 510 0.0 T 22-04-2016 LK04_RS16600 fc152acb0846100137b6ad95c526a7c8 327 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 313 2.0E-91 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 LK04_RS16600 fc152acb0846100137b6ad95c526a7c8 327 Pfam PF01699 Sodium/calcium exchanger protein 5 144 6.0E-28 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 LK04_RS16600 fc152acb0846100137b6ad95c526a7c8 327 Pfam PF01699 Sodium/calcium exchanger protein 176 318 3.2E-27 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 LK04_RS16600 fc152acb0846100137b6ad95c526a7c8 327 PANTHER PTHR10846 1 319 7.1E-77 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 Pfam PF00072 Response regulator receiver domain 5 115 5.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 2.8E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 2.8E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 2.8E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 SMART SM00448 2 115 4.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 SUPERFAMILY SSF52172 3 131 4.55E-33 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 4.3E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 SUPERFAMILY SSF46894 131 211 4.76E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 PANTHER PTHR26402:SF506 2 219 8.2E-110 T 22-04-2016 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 Gene3D G3DSA:1.10.10.10 120 211 8.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 SMART SM00421 147 204 9.0E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 PANTHER PTHR26402 2 219 8.2E-110 T 22-04-2016 LK04_RS11685 beffe93894f46c841fa019e23d766a16 219 Gene3D G3DSA:3.40.50.2300 2 119 1.0E-34 T 22-04-2016 LK04_RS02215 80ddbc1b80893849710624cb632c9f8d 346 Gene3D G3DSA:3.60.15.10 16 197 4.6E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS02215 80ddbc1b80893849710624cb632c9f8d 346 Pfam PF00753 Metallo-beta-lactamase superfamily 16 158 2.1E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS02215 80ddbc1b80893849710624cb632c9f8d 346 SUPERFAMILY SSF56281 4 330 2.46E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS02215 80ddbc1b80893849710624cb632c9f8d 346 SMART SM00849 14 193 3.5E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS16300 d09c2fed6bc3835011568d4a420d7864 128 Gene3D G3DSA:3.30.1330.40 3 127 9.0E-47 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LK04_RS16300 d09c2fed6bc3835011568d4a420d7864 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 3.1E-44 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family LK04_RS16300 d09c2fed6bc3835011568d4a420d7864 128 SUPERFAMILY SSF55298 5 127 3.14E-43 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LK04_RS16300 d09c2fed6bc3835011568d4a420d7864 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 3.8E-53 T 22-04-2016 IPR006056 RidA family LK04_RS16300 d09c2fed6bc3835011568d4a420d7864 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 22-04-2016 IPR019897 RidA, conserved site LK04_RS16300 d09c2fed6bc3835011568d4a420d7864 128 PANTHER PTHR11803 5 127 1.6E-52 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family LK04_RS16895 7521c05e4b720c3a8ecc670c97b60324 293 Gene3D G3DSA:1.20.1050.10 131 253 5.6E-42 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS16895 7521c05e4b720c3a8ecc670c97b60324 293 SUPERFAMILY SSF52833 37 131 6.34E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS16895 7521c05e4b720c3a8ecc670c97b60324 293 SUPERFAMILY SSF47616 181 259 7.23E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS16895 7521c05e4b720c3a8ecc670c97b60324 293 SUPERFAMILY SSF47616 117 152 7.23E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS16895 7521c05e4b720c3a8ecc670c97b60324 293 Gene3D G3DSA:3.40.30.10 33 130 5.7E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS16895 7521c05e4b720c3a8ecc670c97b60324 293 PANTHER PTHR11260 20 252 2.8E-136 T 22-04-2016 LK04_RS16895 7521c05e4b720c3a8ecc670c97b60324 293 Pfam PF02798 Glutathione S-transferase, N-terminal domain 45 127 2.2E-6 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS16895 7521c05e4b720c3a8ecc670c97b60324 293 Pfam PF13410 Glutathione S-transferase, C-terminal domain 182 244 7.7E-11 T 22-04-2016 LK04_RS16895 7521c05e4b720c3a8ecc670c97b60324 293 PANTHER PTHR11260:SF258 20 252 2.8E-136 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 373 603 4.4E-47 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 339 1.3E-36 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 SUPERFAMILY SSF56784 304 323 1.65E-38 T 22-04-2016 IPR023214 HAD-like domain LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 SUPERFAMILY SSF56784 413 567 1.65E-38 T 22-04-2016 IPR023214 HAD-like domain LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 530 5.6E-35 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 Gene3D G3DSA:3.40.50.1000 443 563 2.6E-35 T 22-04-2016 IPR023214 HAD-like domain LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 677 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 SUPERFAMILY SSF81653 112 207 4.05E-21 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 PANTHER PTHR24093 625 676 0.0 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 PANTHER PTHR24093 9 587 0.0 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 SUPERFAMILY SSF81660 316 450 5.56E-36 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 SUPERFAMILY SSF81665 30 103 3.66E-12 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 SUPERFAMILY SSF81665 208 299 3.66E-12 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.7E-24 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.7E-24 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 3.7E-24 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 3.7E-24 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.7E-24 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 Gene3D G3DSA:3.40.1110.10 316 442 7.5E-55 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 680 41.366 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 Gene3D G3DSA:2.70.150.10 49 208 6.4E-24 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 PANTHER PTHR24093:SF49 625 676 0.0 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 PANTHER PTHR24093:SF49 9 587 0.0 T 22-04-2016 LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site LK04_RS00205 5b8f45d31941dc9c07719e909e936fdc 682 Pfam PF00122 E1-E2 ATPase 72 296 2.4E-40 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LK04_RS19115 22db9bf6c24ce79a594b0c1c54bba213 291 PANTHER PTHR32196:SF9 5 291 9.5E-108 T 22-04-2016 LK04_RS19115 22db9bf6c24ce79a594b0c1c54bba213 291 PANTHER PTHR32196 5 291 9.5E-108 T 22-04-2016 LK04_RS19115 22db9bf6c24ce79a594b0c1c54bba213 291 Gene3D G3DSA:3.40.50.2300 141 291 4.2E-55 T 22-04-2016 LK04_RS19115 22db9bf6c24ce79a594b0c1c54bba213 291 Gene3D G3DSA:3.40.50.2300 23 140 4.3E-43 T 22-04-2016 LK04_RS19115 22db9bf6c24ce79a594b0c1c54bba213 291 Pfam PF13407 Periplasmic binding protein domain 25 277 1.8E-58 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS19115 22db9bf6c24ce79a594b0c1c54bba213 291 SUPERFAMILY SSF53822 6 291 2.36E-87 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 SUPERFAMILY SSF50156 227 349 6.7E-22 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 PANTHER PTHR22939 9 351 7.2E-160 T 22-04-2016 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 Gene3D G3DSA:2.30.42.10 257 351 3.3E-27 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 PANTHER PTHR22939:SF93 9 351 7.2E-160 T 22-04-2016 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 PRINTS PR00834 HtrA/DegQ protease family signature 294 306 3.2E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 3.2E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 PRINTS PR00834 HtrA/DegQ protease family signature 183 200 3.2E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 PRINTS PR00834 HtrA/DegQ protease family signature 108 128 3.2E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 PRINTS PR00834 HtrA/DegQ protease family signature 148 172 3.2E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 PRINTS PR00834 HtrA/DegQ protease family signature 87 99 3.2E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 Pfam PF13365 Trypsin-like peptidase domain 78 212 7.5E-28 T 22-04-2016 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 3 349 3.2E-158 T 22-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 SUPERFAMILY SSF50494 45 251 6.19E-58 T 22-04-2016 IPR009003 Peptidase S1, PA clan LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 Gene3D G3DSA:2.40.10.10 145 256 5.2E-39 T 22-04-2016 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 SMART SM00228 254 336 5.7E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 Pfam PF13180 PDZ domain 255 344 2.0E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS16710 48b6ee2b9421dd0fc46b24291a644ada 359 Gene3D G3DSA:2.40.10.10 39 141 3.0E-31 T 22-04-2016 LK04_RS05685 7202b764f9be8b05fda0540e4451b54c 334 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 46.401 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 LK04_RS05685 7202b764f9be8b05fda0540e4451b54c 334 PANTHER PTHR38772 2 334 6.6E-178 T 22-04-2016 LK04_RS05685 7202b764f9be8b05fda0540e4451b54c 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.8E-101 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 LK04_RS11960 37f9282bd66f2bfe93907ae5ab4e0e86 263 Pfam PF00005 ABC transporter 32 166 2.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS11960 37f9282bd66f2bfe93907ae5ab4e0e86 263 PANTHER PTHR24220:SF365 18 248 1.7E-146 T 22-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 LK04_RS11960 37f9282bd66f2bfe93907ae5ab4e0e86 263 Gene3D G3DSA:3.40.50.300 15 223 1.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11960 37f9282bd66f2bfe93907ae5ab4e0e86 263 SMART SM00382 41 216 4.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS11960 37f9282bd66f2bfe93907ae5ab4e0e86 263 PANTHER PTHR24220 18 248 1.7E-146 T 22-04-2016 LK04_RS11960 37f9282bd66f2bfe93907ae5ab4e0e86 263 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS11960 37f9282bd66f2bfe93907ae5ab4e0e86 263 SUPERFAMILY SSF52540 18 220 1.09E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 SMART SM00930 275 351 9.4E-9 T 22-04-2016 IPR018449 NIL domain LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 PANTHER PTHR24220 20 251 1.7E-133 T 22-04-2016 LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 SUPERFAMILY SSF55021 260 354 8.58E-10 T 22-04-2016 LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 PANTHER PTHR24220:SF455 20 251 1.7E-133 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 Gene3D G3DSA:3.30.70.260 250 354 9.9E-14 T 22-04-2016 LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 SUPERFAMILY SSF52540 19 252 1.69E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 Gene3D G3DSA:3.40.50.300 18 249 9.9E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 Pfam PF00005 ABC transporter 34 182 6.6E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 SMART SM00382 43 231 1.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06480 be742dbae3ccfab1988e222961859f76 358 Pfam PF09383 NIL domain 278 349 4.6E-11 T 22-04-2016 IPR018449 NIL domain LK04_RS14555 053967cd1badde840b41bf72d1d84826 243 Gene3D G3DSA:1.10.260.40 11 80 7.8E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS14555 053967cd1badde840b41bf72d1d84826 243 Gene3D G3DSA:2.10.109.10 133 233 5.3E-12 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LK04_RS14555 053967cd1badde840b41bf72d1d84826 243 Pfam PF00717 Peptidase S24-like 155 218 8.9E-8 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B LK04_RS14555 053967cd1badde840b41bf72d1d84826 243 SUPERFAMILY SSF51306 145 232 1.67E-14 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LK04_RS10030 b21618d0feec212555de11772e68c0e0 471 PANTHER PTHR30009 6 466 4.5E-273 T 22-04-2016 LK04_RS10030 b21618d0feec212555de11772e68c0e0 471 Pfam PF00367 phosphotransferase system, EIIB 396 427 1.8E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS10030 b21618d0feec212555de11772e68c0e0 471 Pfam PF02378 Phosphotransferase system, EIIC 3 302 1.8E-75 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS10030 b21618d0feec212555de11772e68c0e0 471 SUPERFAMILY SSF55604 395 466 5.89E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS10030 b21618d0feec212555de11772e68c0e0 471 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 11 313 2.9E-88 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 LK04_RS10030 b21618d0feec212555de11772e68c0e0 471 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 3 466 3.8E-226 T 22-04-2016 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 LK04_RS10030 b21618d0feec212555de11772e68c0e0 471 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 361 452 1.7E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS10030 b21618d0feec212555de11772e68c0e0 471 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 405 422 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS10030 b21618d0feec212555de11772e68c0e0 471 Gene3D G3DSA:3.30.1360.60 395 466 2.1E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS10030 b21618d0feec212555de11772e68c0e0 471 PANTHER PTHR30009:SF1 6 466 4.5E-273 T 22-04-2016 LK04_RS00105 54e8fb4a25ac3d4564cabbb0e27d78a1 450 Gene3D G3DSA:1.20.1250.20 40 228 4.4E-46 T 22-04-2016 LK04_RS00105 54e8fb4a25ac3d4564cabbb0e27d78a1 450 Gene3D G3DSA:1.20.1250.20 243 444 2.3E-24 T 22-04-2016 LK04_RS00105 54e8fb4a25ac3d4564cabbb0e27d78a1 450 PANTHER PTHR11662:SF277 29 446 6.6E-155 T 22-04-2016 LK04_RS00105 54e8fb4a25ac3d4564cabbb0e27d78a1 450 Pfam PF07690 Major Facilitator Superfamily 46 407 4.7E-53 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS00105 54e8fb4a25ac3d4564cabbb0e27d78a1 450 PANTHER PTHR11662 29 446 6.6E-155 T 22-04-2016 LK04_RS00105 54e8fb4a25ac3d4564cabbb0e27d78a1 450 SUPERFAMILY SSF103473 28 445 1.83E-77 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS09970 6aa5b5f04b711208b0d42bbd46649d9d 120 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 89 7.5E-29 T 22-04-2016 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 LK04_RS14285 7fe4bfd01b9f2409747915c9d41e0bd4 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 7.4E-49 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 LK04_RS14285 7fe4bfd01b9f2409747915c9d41e0bd4 147 PANTHER PTHR35146 1 147 1.7E-57 T 22-04-2016 LK04_RS14285 7fe4bfd01b9f2409747915c9d41e0bd4 147 PANTHER PTHR35146:SF1 1 147 1.7E-57 T 22-04-2016 LK04_RS14285 7fe4bfd01b9f2409747915c9d41e0bd4 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.269 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 LK04_RS12995 b5058454510f631137c9fa5dbcaaec77 168 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 78 156 1.8E-31 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LK04_RS12995 b5058454510f631137c9fa5dbcaaec77 168 PANTHER PTHR10815:SF5 6 156 7.2E-57 T 22-04-2016 LK04_RS12995 b5058454510f631137c9fa5dbcaaec77 168 Gene3D G3DSA:1.10.10.10 76 157 1.8E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12995 b5058454510f631137c9fa5dbcaaec77 168 SUPERFAMILY SSF53155 4 82 8.83E-18 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 LK04_RS12995 b5058454510f631137c9fa5dbcaaec77 168 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 2 159 36.966 T 22-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 LK04_RS12995 b5058454510f631137c9fa5dbcaaec77 168 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 73 1.9E-9 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 LK04_RS12995 b5058454510f631137c9fa5dbcaaec77 168 PANTHER PTHR10815 6 156 7.2E-57 T 22-04-2016 LK04_RS12995 b5058454510f631137c9fa5dbcaaec77 168 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 77 156 7.5E-37 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LK04_RS12995 b5058454510f631137c9fa5dbcaaec77 168 SUPERFAMILY SSF46767 76 157 6.15E-32 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LK04_RS18850 e31f0810ecc72845b3da9d33cfe1df52 166 Gene3D G3DSA:3.90.960.10 4 158 3.9E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS18850 e31f0810ecc72845b3da9d33cfe1df52 166 SUPERFAMILY SSF55826 2 155 9.81E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS18850 e31f0810ecc72845b3da9d33cfe1df52 166 Pfam PF04073 Aminoacyl-tRNA editing domain 31 147 7.3E-21 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS18850 e31f0810ecc72845b3da9d33cfe1df52 166 PANTHER PTHR30411:SF5 3 146 1.3E-23 T 22-04-2016 LK04_RS18850 e31f0810ecc72845b3da9d33cfe1df52 166 PANTHER PTHR30411 3 146 1.3E-23 T 22-04-2016 LK04_RS00735 ff4864afb1c23357b589b165688d020b 289 PANTHER PTHR10285:SF72 1 289 2.7E-155 T 22-04-2016 LK04_RS00735 ff4864afb1c23357b589b165688d020b 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.6E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 LK04_RS00735 ff4864afb1c23357b589b165688d020b 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.6E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 LK04_RS00735 ff4864afb1c23357b589b165688d020b 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.6E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 LK04_RS00735 ff4864afb1c23357b589b165688d020b 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.6E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 LK04_RS00735 ff4864afb1c23357b589b165688d020b 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 9.8E-77 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LK04_RS00735 ff4864afb1c23357b589b165688d020b 289 PANTHER PTHR10285 1 289 2.7E-155 T 22-04-2016 LK04_RS00735 ff4864afb1c23357b589b165688d020b 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 LK04_RS00735 ff4864afb1c23357b589b165688d020b 289 Gene3D G3DSA:3.40.50.300 1 288 1.0E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00735 ff4864afb1c23357b589b165688d020b 289 SUPERFAMILY SSF52540 4 286 1.81E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16755 84f4dd60a4ac94b7fc43d799d73b6778 150 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 8.8E-33 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 LK04_RS16755 84f4dd60a4ac94b7fc43d799d73b6778 150 PANTHER PTHR35335:SF1 1 144 5.2E-35 T 22-04-2016 LK04_RS16755 84f4dd60a4ac94b7fc43d799d73b6778 150 PANTHER PTHR35335 1 144 5.2E-35 T 22-04-2016 LK04_RS11015 943ee1b352273aa1c77712cb8634383d 276 PANTHER PTHR11624:SF86 7 276 1.7E-81 T 22-04-2016 LK04_RS11015 943ee1b352273aa1c77712cb8634383d 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 31 268 1.4E-39 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS11015 943ee1b352273aa1c77712cb8634383d 276 PANTHER PTHR11624 7 276 1.7E-81 T 22-04-2016 IPR033247 Transketolase family LK04_RS11015 943ee1b352273aa1c77712cb8634383d 276 SUPERFAMILY SSF52518 12 273 3.66E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS11015 943ee1b352273aa1c77712cb8634383d 276 Gene3D G3DSA:3.40.50.970 3 274 5.3E-83 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS04800 55ca0b01d0781027ab86e68bd6071029 321 PANTHER PTHR30514 1 320 1.2E-120 T 22-04-2016 LK04_RS04800 55ca0b01d0781027ab86e68bd6071029 321 SUPERFAMILY SSF53067 4 318 7.07E-66 T 22-04-2016 LK04_RS04800 55ca0b01d0781027ab86e68bd6071029 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 9.1E-142 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LK04_RS04800 55ca0b01d0781027ab86e68bd6071029 321 Gene3D G3DSA:3.30.420.40 1 66 3.3E-5 T 22-04-2016 LK04_RS04800 55ca0b01d0781027ab86e68bd6071029 321 PANTHER PTHR30514:SF0 1 320 1.2E-120 T 22-04-2016 LK04_RS04800 55ca0b01d0781027ab86e68bd6071029 321 Hamap MF_00524 Glucokinase [glk]. 2 316 39.817 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LK04_RS04800 55ca0b01d0781027ab86e68bd6071029 321 Gene3D G3DSA:3.40.367.20 100 299 2.0E-78 T 22-04-2016 LK04_RS04800 55ca0b01d0781027ab86e68bd6071029 321 Pfam PF02685 Glucokinase 6 315 1.0E-125 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LK04_RS18205 569d66d1db370650ebf836fa716cb195 494 PIRSF PIRSF001267 1 494 1.8E-181 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 LK04_RS18205 569d66d1db370650ebf836fa716cb195 494 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 55.839 T 22-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 LK04_RS18205 569d66d1db370650ebf836fa716cb195 494 PANTHER PTHR30005 1 493 0.0 T 22-04-2016 LK04_RS18205 569d66d1db370650ebf836fa716cb195 494 Gene3D G3DSA:3.30.420.150 128 300 4.7E-52 T 22-04-2016 LK04_RS18205 569d66d1db370650ebf836fa716cb195 494 PANTHER PTHR30005:SF2 1 493 0.0 T 22-04-2016 LK04_RS18205 569d66d1db370650ebf836fa716cb195 494 SUPERFAMILY SSF53067 132 300 8.95E-42 T 22-04-2016 LK04_RS18205 569d66d1db370650ebf836fa716cb195 494 Pfam PF02541 Ppx/GppA phosphatase family 21 301 1.5E-95 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 LK04_RS18205 569d66d1db370650ebf836fa716cb195 494 SUPERFAMILY SSF109604 307 489 2.39E-45 T 22-04-2016 LK04_RS18205 569d66d1db370650ebf836fa716cb195 494 SUPERFAMILY SSF53067 7 128 1.21E-36 T 22-04-2016 LK04_RS18205 569d66d1db370650ebf836fa716cb195 494 Gene3D G3DSA:3.30.420.40 4 127 4.6E-45 T 22-04-2016 LK04_RS09860 58213ef9eaa78304c7a8211bfef565c7 111 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 45 63 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site LK04_RS09860 58213ef9eaa78304c7a8211bfef565c7 111 PANTHER PTHR33221 1 78 1.8E-20 T 22-04-2016 LK04_RS09860 58213ef9eaa78304c7a8211bfef565c7 111 Pfam PF02082 Transcriptional regulator 1 78 1.6E-17 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type LK04_RS09860 58213ef9eaa78304c7a8211bfef565c7 111 SUPERFAMILY SSF46785 1 81 1.32E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09860 58213ef9eaa78304c7a8211bfef565c7 111 Gene3D G3DSA:1.10.10.10 2 82 1.8E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09860 58213ef9eaa78304c7a8211bfef565c7 111 PANTHER PTHR33221:SF1 1 78 1.8E-20 T 22-04-2016 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 Pfam PF08442 ATP-grasp domain 2 203 2.6E-82 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.792 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 PIRSF PIRSF001554 1 388 2.1E-154 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.5E-180 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 Pfam PF00549 CoA-ligase 262 381 2.5E-23 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 Gene3D G3DSA:3.30.470.20 96 239 6.4E-56 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 Gene3D G3DSA:3.30.1490.20 22 95 5.1E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 SUPERFAMILY SSF56059 1 238 1.06E-80 T 22-04-2016 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 PANTHER PTHR11815 1 388 3.5E-233 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 Gene3D G3DSA:3.40.50.261 240 383 4.6E-64 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS13085 a23886c4dd1687f88919621a113f6c6d 388 SUPERFAMILY SSF52210 239 385 1.28E-51 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS01595 14d5a27d25b80cb1b7fe231d1aaecdc0 195 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 195 57.774 T 22-04-2016 IPR023070 DnaA initiator-associating protein LK04_RS01595 14d5a27d25b80cb1b7fe231d1aaecdc0 195 PANTHER PTHR30390 1 195 1.5E-126 T 22-04-2016 LK04_RS01595 14d5a27d25b80cb1b7fe231d1aaecdc0 195 Gene3D G3DSA:3.40.50.10490 2 191 1.6E-55 T 22-04-2016 LK04_RS01595 14d5a27d25b80cb1b7fe231d1aaecdc0 195 SUPERFAMILY SSF53697 2 191 1.88E-51 T 22-04-2016 LK04_RS01595 14d5a27d25b80cb1b7fe231d1aaecdc0 195 PANTHER PTHR30390:SF5 1 195 1.5E-126 T 22-04-2016 LK04_RS01595 14d5a27d25b80cb1b7fe231d1aaecdc0 195 Pfam PF13580 SIS domain 9 144 5.0E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS09635 26bea31c100d49e38e83631e0e081a61 88 SUPERFAMILY SSF52038 1 85 3.92E-17 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) LK04_RS09635 26bea31c100d49e38e83631e0e081a61 88 Pfam PF01337 Barstar (barnase inhibitor) 6 81 5.7E-11 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) LK04_RS09635 26bea31c100d49e38e83631e0e081a61 88 Gene3D G3DSA:3.30.370.10 3 85 1.7E-18 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) LK04_RS01175 90116f721f0cc1a4546852e69e5787f1 334 SUPERFAMILY SSF56524 75 330 3.4E-92 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LK04_RS01175 90116f721f0cc1a4546852e69e5787f1 334 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 267 7.5E-28 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LK04_RS01175 90116f721f0cc1a4546852e69e5787f1 334 Gene3D G3DSA:3.90.420.10 67 331 3.7E-74 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LK04_RS01175 90116f721f0cc1a4546852e69e5787f1 334 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 2 334 60.781 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 LK04_RS01175 90116f721f0cc1a4546852e69e5787f1 334 PANTHER PTHR19372 7 329 9.6E-177 T 22-04-2016 LK04_RS01175 90116f721f0cc1a4546852e69e5787f1 334 PANTHER PTHR19372:SF1 7 329 9.6E-177 T 22-04-2016 LK04_RS19625 73b28ce97814c98617d03c698384feec 71 PANTHER PTHR33280:SF2 1 66 1.3E-37 T 22-04-2016 LK04_RS19625 73b28ce97814c98617d03c698384feec 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19625 73b28ce97814c98617d03c698384feec 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 8.2E-24 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19625 73b28ce97814c98617d03c698384feec 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 8.2E-24 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19625 73b28ce97814c98617d03c698384feec 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 8.2E-24 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19625 73b28ce97814c98617d03c698384feec 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.5E-34 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19625 73b28ce97814c98617d03c698384feec 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.792 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19625 73b28ce97814c98617d03c698384feec 71 PANTHER PTHR33280 1 66 1.3E-37 T 22-04-2016 LK04_RS19625 73b28ce97814c98617d03c698384feec 71 SUPERFAMILY SSF143800 1 66 2.55E-28 T 22-04-2016 LK04_RS19625 73b28ce97814c98617d03c698384feec 71 Pfam PF01197 Ribosomal protein L31 1 64 8.5E-32 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS06250 ce82fa9360195ad262ecd5595e69e323 319 PANTHER PTHR10859:SF81 1 300 4.1E-167 T 22-04-2016 LK04_RS06250 ce82fa9360195ad262ecd5595e69e323 319 PANTHER PTHR10859 1 300 4.1E-167 T 22-04-2016 LK04_RS06250 ce82fa9360195ad262ecd5595e69e323 319 SUPERFAMILY SSF53448 1 240 4.22E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06250 ce82fa9360195ad262ecd5595e69e323 319 Gene3D G3DSA:3.90.550.10 1 174 1.4E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06250 ce82fa9360195ad262ecd5595e69e323 319 Pfam PF00535 Glycosyl transferase family 2 4 166 4.5E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS16430 b2f762913819c7be6167d240e650c296 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 2.50351E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.50351E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 2.50351E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 SUPERFAMILY SSF55957 357 443 4.32E-23 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 7.8E-32 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 SUPERFAMILY SSF53738 258 365 4.71E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 PANTHER PTHR22573 1 443 2.3E-184 T 22-04-2016 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 1.8E-19 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 5.6E-45 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 2.4E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 47.819 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 1.4E-196 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 Gene3D G3DSA:3.40.120.10 4 151 4.7E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 Gene3D G3DSA:3.40.120.10 176 250 1.2E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 SUPERFAMILY SSF53738 2 181 3.57E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 SUPERFAMILY SSF53738 156 255 8.24E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 Gene3D G3DSA:3.40.120.10 251 359 1.6E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 PANTHER PTHR22573:SF15 1 443 2.3E-184 T 22-04-2016 LK04_RS16430 b2f762913819c7be6167d240e650c296 444 Gene3D G3DSA:3.30.310.50 360 442 3.1E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS00585 f45ec72ba046ef977a5d6bced4747644 133 PANTHER PTHR11079:SF70 1 109 1.6E-30 T 22-04-2016 LK04_RS00585 f45ec72ba046ef977a5d6bced4747644 133 Pfam PF01479 S4 domain 9 51 5.0E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS00585 f45ec72ba046ef977a5d6bced4747644 133 SUPERFAMILY SSF55174 9 103 8.37E-30 T 22-04-2016 LK04_RS00585 f45ec72ba046ef977a5d6bced4747644 133 PIRSF PIRSF016821 6 133 2.0E-40 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 LK04_RS00585 f45ec72ba046ef977a5d6bced4747644 133 PANTHER PTHR11079 1 109 1.6E-30 T 22-04-2016 LK04_RS00585 f45ec72ba046ef977a5d6bced4747644 133 Gene3D G3DSA:3.10.290.10 8 103 1.6E-37 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS00585 f45ec72ba046ef977a5d6bced4747644 133 SMART SM00363 9 72 5.9E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 527 651 3.5E-47 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 431 448 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 Pfam PF02378 Phosphotransferase system, EIIC 10 322 6.8E-76 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 Gene3D G3DSA:2.70.70.10 526 669 1.6E-55 T 22-04-2016 LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 SUPERFAMILY SSF55604 418 491 1.44E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 SUPERFAMILY SSF51261 526 670 4.01E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 Pfam PF00367 phosphotransferase system, EIIB 421 453 2.5E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 489 7.5E-205 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 Gene3D G3DSA:3.30.1360.60 415 493 5.1E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 PANTHER PTHR30009:SF4 2 503 8.2E-253 T 22-04-2016 LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 528 648 1.6E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 PANTHER PTHR30009 2 503 8.2E-253 T 22-04-2016 LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 590 602 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS13225 faf50aeddf2e35f0b677e298cf7e90f1 675 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 382 478 1.8E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS17840 739a1bd2b6a50207cca6a707de7810eb 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 243 1.7E-13 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LK04_RS17840 739a1bd2b6a50207cca6a707de7810eb 316 PANTHER PTHR10285:SF7 278 316 1.9E-171 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 LK04_RS17840 739a1bd2b6a50207cca6a707de7810eb 316 PANTHER PTHR10285:SF7 1 262 1.9E-171 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 LK04_RS17840 739a1bd2b6a50207cca6a707de7810eb 316 PIRSF PIRSF000545 1 316 2.2E-148 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 LK04_RS17840 739a1bd2b6a50207cca6a707de7810eb 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 190.929 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 LK04_RS17840 739a1bd2b6a50207cca6a707de7810eb 316 SUPERFAMILY SSF52540 10 315 9.52E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17840 739a1bd2b6a50207cca6a707de7810eb 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 2.6E-172 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 LK04_RS17840 739a1bd2b6a50207cca6a707de7810eb 316 Gene3D G3DSA:3.40.50.300 10 316 7.9E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17840 739a1bd2b6a50207cca6a707de7810eb 316 PANTHER PTHR10285 278 316 1.9E-171 T 22-04-2016 LK04_RS17840 739a1bd2b6a50207cca6a707de7810eb 316 PANTHER PTHR10285 1 262 1.9E-171 T 22-04-2016 LK04_RS03515 909ffb9dbe1c74afdd85bd2e0b8f42e9 253 PANTHER PTHR30457 1 248 2.5E-95 T 22-04-2016 LK04_RS03515 909ffb9dbe1c74afdd85bd2e0b8f42e9 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 39.038 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LK04_RS03515 909ffb9dbe1c74afdd85bd2e0b8f42e9 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.4E-74 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LK04_RS03515 909ffb9dbe1c74afdd85bd2e0b8f42e9 253 SUPERFAMILY SSF64167 1 246 7.06E-81 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LK04_RS03515 909ffb9dbe1c74afdd85bd2e0b8f42e9 253 Gene3D G3DSA:3.40.1210.10 1 247 4.8E-84 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LK04_RS03515 909ffb9dbe1c74afdd85bd2e0b8f42e9 253 Pfam PF01975 Survival protein SurE 3 180 3.1E-56 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LK04_RS02525 c6dfd1c4bbd6db58642001970ba064d9 529 Gene3D G3DSA:3.30.70.900 433 506 1.1E-5 T 22-04-2016 LK04_RS02525 c6dfd1c4bbd6db58642001970ba064d9 529 PANTHER PTHR23513 2 431 9.7E-120 T 22-04-2016 LK04_RS02525 c6dfd1c4bbd6db58642001970ba064d9 529 Gene3D G3DSA:1.20.1250.20 233 403 9.1E-15 T 22-04-2016 LK04_RS02525 c6dfd1c4bbd6db58642001970ba064d9 529 Gene3D G3DSA:1.20.1250.20 23 206 4.1E-20 T 22-04-2016 LK04_RS02525 c6dfd1c4bbd6db58642001970ba064d9 529 SUPERFAMILY SSF103473 22 404 1.31E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02525 c6dfd1c4bbd6db58642001970ba064d9 529 Pfam PF05977 Transmembrane secretion effector 12 527 4.4E-197 T 22-04-2016 IPR010290 Transmembrane secretion effector LK04_RS02525 c6dfd1c4bbd6db58642001970ba064d9 529 PRINTS PR01036 Tetracycline resistance protein TetB signature 150 174 7.4E-5 T 22-04-2016 LK04_RS02525 c6dfd1c4bbd6db58642001970ba064d9 529 PRINTS PR01036 Tetracycline resistance protein TetB signature 383 402 7.4E-5 T 22-04-2016 LK04_RS02525 c6dfd1c4bbd6db58642001970ba064d9 529 PRINTS PR01036 Tetracycline resistance protein TetB signature 120 140 7.4E-5 T 22-04-2016 LK04_RS02525 c6dfd1c4bbd6db58642001970ba064d9 529 PANTHER PTHR23513:SF7 2 431 9.7E-120 T 22-04-2016 LK04_RS01000 0458e7d2faad4ec07d38e365ff454a94 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01000 0458e7d2faad4ec07d38e365ff454a94 128 Gene3D G3DSA:3.90.1030.10 1 117 2.5E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01000 0458e7d2faad4ec07d38e365ff454a94 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01000 0458e7d2faad4ec07d38e365ff454a94 128 PANTHER PTHR14413 1 119 6.5E-69 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01000 0458e7d2faad4ec07d38e365ff454a94 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.9E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01000 0458e7d2faad4ec07d38e365ff454a94 128 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01000 0458e7d2faad4ec07d38e365ff454a94 128 SUPERFAMILY SSF64263 1 119 1.96E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 3.0E-259 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.541 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 Pfam PF00920 Dehydratase family 34 607 1.2E-213 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 PANTHER PTHR21000:SF11 406 616 0.0 T 22-04-2016 LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 PANTHER PTHR21000 406 616 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 SUPERFAMILY SSF52016 421 610 4.79E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19785 38c8ef3019170433b7bf6fc0556d6aed 616 SUPERFAMILY SSF143975 3 420 9.29E-133 T 22-04-2016 LK04_RS18935 8adf6cfa0776fdd10bc1b18c388833d4 246 SUPERFAMILY SSF52540 65 229 4.32E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18935 8adf6cfa0776fdd10bc1b18c388833d4 246 Gene3D G3DSA:3.40.50.300 51 223 9.0E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18935 8adf6cfa0776fdd10bc1b18c388833d4 246 Pfam PF01695 IstB-like ATP binding protein 93 219 2.9E-18 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 LK04_RS18935 8adf6cfa0776fdd10bc1b18c388833d4 246 PIRSF PIRSF003073 2 245 1.2E-32 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein LK04_RS18935 8adf6cfa0776fdd10bc1b18c388833d4 246 PANTHER PTHR30050:SF9 5 246 3.8E-133 T 22-04-2016 LK04_RS18935 8adf6cfa0776fdd10bc1b18c388833d4 246 PANTHER PTHR30050 5 246 3.8E-133 T 22-04-2016 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 286 1.7E-6 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 542 574 2.0E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 PANTHER PTHR24220:SF442 339 449 2.8E-198 T 22-04-2016 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 PANTHER PTHR24220:SF442 15 310 2.8E-198 T 22-04-2016 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 Pfam PF00005 ABC transporter 34 196 5.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 Pfam PF00005 ABC transporter 340 489 2.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 PANTHER PTHR24220 339 449 2.8E-198 T 22-04-2016 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 PANTHER PTHR24220 15 310 2.8E-198 T 22-04-2016 LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 SMART SM00382 348 540 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 SMART SM00382 42 246 2.1E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 SUPERFAMILY SSF52540 13 268 1.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 Gene3D G3DSA:3.40.50.300 311 564 5.1E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 Gene3D G3DSA:3.40.50.300 12 270 6.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12375 64875f69557248fb8c5b7616e085d652 618 SUPERFAMILY SSF52540 313 562 8.45E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 SUPERFAMILY SSF50465 280 352 4.68E-6 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 Pfam PF00009 Elongation factor Tu GTP binding domain 2 157 1.8E-28 T 22-04-2016 LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 Pfam PF09106 Elongation factor SelB, winged helix 425 481 1.6E-14 T 22-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 Pfam PF09107 Elongation factor SelB, winged helix 564 606 4.3E-18 T 22-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 608 2.1E-191 T 22-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 PANTHER PTHR23115 1 339 1.3E-122 T 22-04-2016 LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 Gene3D G3DSA:1.10.10.10 550 608 3.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 Gene3D G3DSA:1.10.10.10 420 482 3.7E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 SUPERFAMILY SSF46785 418 486 3.45E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 SUPERFAMILY SSF46785 558 608 2.59E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 SUPERFAMILY SSF52540 2 167 4.75E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 Gene3D G3DSA:3.40.50.300 3 163 2.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 SUPERFAMILY SSF50447 175 272 2.7E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 Gene3D G3DSA:2.40.30.10 173 296 4.1E-25 T 22-04-2016 LK04_RS18550 1a22be74223296f347a761dfa7478f29 616 PANTHER PTHR23115:SF129 1 339 1.3E-122 T 22-04-2016 LK04_RS18670 a6c1ba1e10b45f9a0f1d0e852baf91c0 132 Gene3D G3DSA:1.10.10.60 7 59 1.9E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18670 a6c1ba1e10b45f9a0f1d0e852baf91c0 132 SUPERFAMILY SSF46689 7 56 2.94E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18670 a6c1ba1e10b45f9a0f1d0e852baf91c0 132 Gene3D G3DSA:1.10.10.60 60 109 1.0E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18670 a6c1ba1e10b45f9a0f1d0e852baf91c0 132 SMART SM00342 22 105 1.1E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS18670 a6c1ba1e10b45f9a0f1d0e852baf91c0 132 SUPERFAMILY SSF46689 59 110 3.14E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18670 a6c1ba1e10b45f9a0f1d0e852baf91c0 132 PANTHER PTHR11019:SF118 8 113 2.0E-40 T 22-04-2016 LK04_RS18670 a6c1ba1e10b45f9a0f1d0e852baf91c0 132 PANTHER PTHR11019 8 113 2.0E-40 T 22-04-2016 LK04_RS18670 a6c1ba1e10b45f9a0f1d0e852baf91c0 132 Pfam PF12833 Helix-turn-helix domain 28 106 4.3E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS09355 69bef2b1e3e50ce8ec7b329c207b225d 293 SUPERFAMILY SSF53850 87 291 3.08E-43 T 22-04-2016 LK04_RS09355 69bef2b1e3e50ce8ec7b329c207b225d 293 PANTHER PTHR30537 1 291 2.9E-93 T 22-04-2016 LK04_RS09355 69bef2b1e3e50ce8ec7b329c207b225d 293 Gene3D G3DSA:3.40.190.10 91 175 1.1E-23 T 22-04-2016 LK04_RS09355 69bef2b1e3e50ce8ec7b329c207b225d 293 Gene3D G3DSA:3.40.190.10 176 252 2.0E-18 T 22-04-2016 LK04_RS09355 69bef2b1e3e50ce8ec7b329c207b225d 293 Gene3D G3DSA:1.10.10.10 1 81 4.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09355 69bef2b1e3e50ce8ec7b329c207b225d 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS09355 69bef2b1e3e50ce8ec7b329c207b225d 293 Pfam PF03466 LysR substrate binding domain 87 288 3.0E-43 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS09355 69bef2b1e3e50ce8ec7b329c207b225d 293 SUPERFAMILY SSF46785 1 87 1.03E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09355 69bef2b1e3e50ce8ec7b329c207b225d 293 PANTHER PTHR30537:SF5 1 291 2.9E-93 T 22-04-2016 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 803 26.079 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 803 1.1E-285 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 PIRSF PIRSF006076 1 803 1.5E-257 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 PANTHER PTHR12815 693 803 0.0 T 22-04-2016 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 PANTHER PTHR12815 5 672 0.0 T 22-04-2016 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 PANTHER PTHR12815:SF11 693 803 0.0 T 22-04-2016 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 PANTHER PTHR12815:SF11 5 672 0.0 T 22-04-2016 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 Gene3D G3DSA:2.40.160.50 384 800 4.5E-25 T 22-04-2016 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 Pfam PF07244 Surface antigen variable number repeat 266 344 1.3E-10 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 Pfam PF07244 Surface antigen variable number repeat 176 263 5.6E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 Pfam PF07244 Surface antigen variable number repeat 92 172 4.2E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 Pfam PF07244 Surface antigen variable number repeat 347 421 3.2E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 LK04_RS14945 16c0f5b3c7b2097b7ab83999a91265fe 803 Pfam PF01103 Surface antigen 448 803 9.3E-101 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 Pfam PF00183 Hsp90 protein 213 623 1.7E-127 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 PANTHER PTHR11528:SF44 7 623 0.0 T 22-04-2016 LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 SMART SM00387 29 186 8.3E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 PIRSF PIRSF002583 2 624 3.5E-218 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 183 2.6E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 SUPERFAMILY SSF54211 230 485 3.57E-101 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 PRINTS PR00775 90kDa heat shock protein signature 28 50 2.8E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 PRINTS PR00775 90kDa heat shock protein signature 174 191 2.8E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 PRINTS PR00775 90kDa heat shock protein signature 192 210 2.8E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 PRINTS PR00775 90kDa heat shock protein signature 7 27 2.8E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 PRINTS PR00775 90kDa heat shock protein signature 122 144 2.8E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 PRINTS PR00775 90kDa heat shock protein signature 95 112 2.8E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 PRINTS PR00775 90kDa heat shock protein signature 77 94 2.8E-61 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 623 32.947 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 PANTHER PTHR11528 7 623 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 SUPERFAMILY SSF110942 510 623 5.62E-36 T 22-04-2016 LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 Gene3D G3DSA:3.30.565.10 7 238 6.9E-82 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS13795 ea6d9f3b06e680ffd7af3382ddab8baf 624 SUPERFAMILY SSF55874 6 216 1.44E-65 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19665 f6c7ae0f6947795963edea061a2a9799 257 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 257 26.192 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19665 f6c7ae0f6947795963edea061a2a9799 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 1.2E-73 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19665 f6c7ae0f6947795963edea061a2a9799 257 PANTHER PTHR23342 1 256 2.1E-93 T 22-04-2016 LK04_RS19665 f6c7ae0f6947795963edea061a2a9799 257 PIRSF PIRSF000728 1 257 6.9E-74 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19665 f6c7ae0f6947795963edea061a2a9799 257 Pfam PF00696 Amino acid kinase family 4 234 4.2E-39 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS19665 f6c7ae0f6947795963edea061a2a9799 257 SUPERFAMILY SSF53633 2 256 8.77E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS19665 f6c7ae0f6947795963edea061a2a9799 257 Gene3D G3DSA:3.40.1160.10 2 256 2.3E-76 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LK04_RS13100 272a6d93ace942c451c125959cb4a076 238 PANTHER PTHR11921 4 236 4.7E-133 T 22-04-2016 LK04_RS13100 272a6d93ace942c451c125959cb4a076 238 PANTHER PTHR11921:SF29 4 236 4.7E-133 T 22-04-2016 LK04_RS13100 272a6d93ace942c451c125959cb4a076 238 Gene3D G3DSA:1.10.1060.10 108 236 6.4E-46 T 22-04-2016 LK04_RS13100 272a6d93ace942c451c125959cb4a076 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS13100 272a6d93ace942c451c125959cb4a076 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 8.4E-10 T 22-04-2016 LK04_RS13100 272a6d93ace942c451c125959cb4a076 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 2.2E-31 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 LK04_RS13100 272a6d93ace942c451c125959cb4a076 238 SUPERFAMILY SSF46548 107 237 2.62E-39 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 LK04_RS13100 272a6d93ace942c451c125959cb4a076 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 2.9E-89 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 LK04_RS13100 272a6d93ace942c451c125959cb4a076 238 Gene3D G3DSA:3.10.20.30 1 106 3.8E-37 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS13100 272a6d93ace942c451c125959cb4a076 238 SUPERFAMILY SSF54292 1 106 4.36E-30 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LK04_RS18415 0a27f3371903bc716037e7270b39d4ef 352 PANTHER PTHR30024 1 243 1.1E-13 T 22-04-2016 LK04_RS18415 0a27f3371903bc716037e7270b39d4ef 352 Gene3D G3DSA:3.40.190.10 126 234 9.1E-13 T 22-04-2016 LK04_RS18415 0a27f3371903bc716037e7270b39d4ef 352 TIGRFAM TIGR03427 ABC_peri_uca: ABC transporter periplasmic binding protein, urea carboxylase region 26 352 3.2E-161 T 22-04-2016 IPR017793 ABC transporter, urea utilisation-associated, substrate-binding protein LK04_RS18415 0a27f3371903bc716037e7270b39d4ef 352 SUPERFAMILY SSF53850 35 243 5.98E-33 T 22-04-2016 LK04_RS18415 0a27f3371903bc716037e7270b39d4ef 352 Pfam PF09084 NMT1/THI5 like 56 239 1.3E-10 T 22-04-2016 IPR015168 SsuA/THI5-like LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 SMART SM01134 73 233 8.1E-67 T 22-04-2016 LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 PANTHER PTHR30363 1 247 1.3E-87 T 22-04-2016 LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 SUPERFAMILY SSF100950 74 234 2.0E-28 T 22-04-2016 LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 Gene3D G3DSA:1.10.10.10 1 59 7.6E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.0E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 PANTHER PTHR30363:SF13 1 247 1.3E-87 T 22-04-2016 LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 Gene3D G3DSA:3.40.50.1360 77 222 3.6E-9 T 22-04-2016 LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 SUPERFAMILY SSF46785 5 76 1.43E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 SMART SM00420 6 58 3.8E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 Pfam PF00455 DeoR C terminal sensor domain 75 231 2.1E-46 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.1E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.1E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS15180 8de18b015e188810ad7616b0424dfb35 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PANTHER PTHR24322:SF402 15 142 6.0E-64 T 22-04-2016 LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PANTHER PTHR24322:SF402 158 190 6.0E-64 T 22-04-2016 LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 4.2E-57 T 22-04-2016 LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.1E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 5.1E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.1E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 6.2E-133 T 22-04-2016 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 SUPERFAMILY SSF51735 9 252 1.19E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 Gene3D G3DSA:3.40.50.720 6 252 1.6E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PANTHER PTHR24322 15 142 6.0E-64 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PANTHER PTHR24322 158 190 6.0E-64 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 8.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 8.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 8.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 8.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 8.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10510 e21d458f609b6cf217cc39e941bd1894 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 8.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01925 c15dbc8ad28b0d029729f376076b7949 272 PANTHER PTHR30622:SF3 3 272 1.2E-143 T 22-04-2016 LK04_RS01925 c15dbc8ad28b0d029729f376076b7949 272 Pfam PF02673 Bacitracin resistance protein BacA 10 265 1.8E-81 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LK04_RS01925 c15dbc8ad28b0d029729f376076b7949 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 264 2.1E-101 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LK04_RS01925 c15dbc8ad28b0d029729f376076b7949 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 271 18.478 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LK04_RS01925 c15dbc8ad28b0d029729f376076b7949 272 PANTHER PTHR30622 3 272 1.2E-143 T 22-04-2016 LK04_RS06470 995e93cc27cb75c1331fd05d179c985a 213 Pfam PF08359 YsiA-like protein, C-terminal region 84 166 2.5E-4 T 22-04-2016 IPR013570 Transcription regulator YsiA, C-terminal LK04_RS06470 995e93cc27cb75c1331fd05d179c985a 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 9.8E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS06470 995e93cc27cb75c1331fd05d179c985a 213 PANTHER PTHR30328 8 210 3.1E-55 T 22-04-2016 LK04_RS06470 995e93cc27cb75c1331fd05d179c985a 213 SUPERFAMILY SSF46689 6 79 1.9E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS06470 995e93cc27cb75c1331fd05d179c985a 213 Gene3D G3DSA:1.10.357.10 16 210 1.9E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS06470 995e93cc27cb75c1331fd05d179c985a 213 SUPERFAMILY SSF48498 85 209 6.99E-25 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LK04_RS06470 995e93cc27cb75c1331fd05d179c985a 213 PANTHER PTHR30328:SF16 8 210 3.1E-55 T 22-04-2016 LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 22-04-2016 IPR033135 ClpP, histidine active site LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 PANTHER PTHR10381 2 207 8.7E-144 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 5.8E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 5.8E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 5.8E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 5.8E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 5.8E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 Pfam PF00574 Clp protease 25 205 9.7E-91 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 SUPERFAMILY SSF52096 23 206 5.16E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 Gene3D G3DSA:3.90.226.10 16 206 3.9E-92 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 PANTHER PTHR10381:SF22 2 207 8.7E-144 T 22-04-2016 LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 1.0E-111 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 22-04-2016 IPR018215 ClpP, Ser active site LK04_RS13980 717af47cc1e201a7be1f9ba856b53365 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.964 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 SUPERFAMILY SSF47323 642 899 3.92E-69 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 Gene3D G3DSA:1.10.287.380 881 934 5.2E-6 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PANTHER PTHR11946:SF5 608 860 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PANTHER PTHR11946:SF5 880 943 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PANTHER PTHR11946:SF5 1 570 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.169 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 SUPERFAMILY SSF46589 884 945 4.18E-14 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 Gene3D G3DSA:3.40.50.620 609 630 5.1E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 Gene3D G3DSA:3.40.50.620 364 571 5.1E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 Gene3D G3DSA:3.40.50.620 3 193 5.1E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 825 3.3E-44 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PANTHER PTHR11946 608 860 0.0 T 22-04-2016 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PANTHER PTHR11946 880 943 0.0 T 22-04-2016 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PANTHER PTHR11946 1 570 0.0 T 22-04-2016 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 SUPERFAMILY SSF50677 191 365 1.05E-56 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 SUPERFAMILY SSF52374 364 571 5.88E-137 T 22-04-2016 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 SUPERFAMILY SSF52374 1 192 5.88E-137 T 22-04-2016 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 SUPERFAMILY SSF52374 609 641 5.88E-137 T 22-04-2016 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 Gene3D G3DSA:1.10.730.10 631 816 1.5E-65 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 2.0E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 2.0E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 2.0E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.0E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 2.0E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 929 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 9.8E-228 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 Gene3D G3DSA:3.90.740.10 194 360 3.9E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LK04_RS16265 f3e49ef7c0b1c28ae6c1174192867293 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 944 7.1E-16 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 LK04_RS05050 f4de48dbb0699495cf510559d829829f 434 Pfam PF04860 Phage portal protein 53 378 2.4E-93 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein LK04_RS05050 f4de48dbb0699495cf510559d829829f 434 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 43 384 1.3E-77 T 22-04-2016 IPR006427 Phage portal protein, HK97 LK04_RS00045 77288e9a97a33bc9a0f3a33d89b2e2e1 294 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 61 7.4E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS00045 77288e9a97a33bc9a0f3a33d89b2e2e1 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 293 1.3E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00045 77288e9a97a33bc9a0f3a33d89b2e2e1 294 PANTHER PTHR30465 9 294 1.0E-123 T 22-04-2016 LK04_RS00045 77288e9a97a33bc9a0f3a33d89b2e2e1 294 Gene3D G3DSA:1.10.3720.10 85 290 3.6E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00045 77288e9a97a33bc9a0f3a33d89b2e2e1 294 PANTHER PTHR30465:SF57 9 294 1.0E-123 T 22-04-2016 LK04_RS00045 77288e9a97a33bc9a0f3a33d89b2e2e1 294 SUPERFAMILY SSF161098 86 278 3.66E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19895 77288e9a97a33bc9a0f3a33d89b2e2e1 294 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 61 7.4E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS19895 77288e9a97a33bc9a0f3a33d89b2e2e1 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 293 1.3E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19895 77288e9a97a33bc9a0f3a33d89b2e2e1 294 PANTHER PTHR30465 9 294 1.0E-123 T 22-04-2016 LK04_RS19895 77288e9a97a33bc9a0f3a33d89b2e2e1 294 Gene3D G3DSA:1.10.3720.10 85 290 3.6E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19895 77288e9a97a33bc9a0f3a33d89b2e2e1 294 PANTHER PTHR30465:SF57 9 294 1.0E-123 T 22-04-2016 LK04_RS19895 77288e9a97a33bc9a0f3a33d89b2e2e1 294 SUPERFAMILY SSF161098 86 278 3.66E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19090 f8c28d69b3c12c6fdadf45a4f85b001f 220 Pfam PF00072 Response regulator receiver domain 3 112 8.3E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS19090 f8c28d69b3c12c6fdadf45a4f85b001f 220 Gene3D G3DSA:3.40.50.2300 1 122 4.3E-36 T 22-04-2016 LK04_RS19090 f8c28d69b3c12c6fdadf45a4f85b001f 220 Gene3D G3DSA:1.10.10.10 124 217 3.2E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19090 f8c28d69b3c12c6fdadf45a4f85b001f 220 PANTHER PTHR26402 1 217 2.2E-125 T 22-04-2016 LK04_RS19090 f8c28d69b3c12c6fdadf45a4f85b001f 220 SUPERFAMILY SSF52172 1 178 6.64E-37 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS19090 f8c28d69b3c12c6fdadf45a4f85b001f 220 SMART SM00862 145 216 1.5E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS19090 f8c28d69b3c12c6fdadf45a4f85b001f 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 7.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS19090 f8c28d69b3c12c6fdadf45a4f85b001f 220 SMART SM00448 1 112 2.9E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS19090 f8c28d69b3c12c6fdadf45a4f85b001f 220 PANTHER PTHR26402:SF279 1 217 2.2E-125 T 22-04-2016 LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PANTHER PTHR24321 5 252 6.3E-39 T 22-04-2016 LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 Gene3D G3DSA:3.40.50.720 4 251 8.3E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PANTHER PTHR24321:SF6 5 252 6.3E-39 T 22-04-2016 LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 250 1.3E-48 T 22-04-2016 LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS14500 026fbecd952d2f5ef81715383c78d9cb 258 SUPERFAMILY SSF51735 6 251 6.35E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06155 e1fa4cf213ed43381ed3440aa0af497a 257 SUPERFAMILY SSF52540 45 240 6.65E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06155 e1fa4cf213ed43381ed3440aa0af497a 257 PANTHER PTHR24220:SF476 45 250 2.2E-90 T 22-04-2016 LK04_RS06155 e1fa4cf213ed43381ed3440aa0af497a 257 Gene3D G3DSA:3.40.50.300 2 240 1.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06155 e1fa4cf213ed43381ed3440aa0af497a 257 PANTHER PTHR24220 45 250 2.2E-90 T 22-04-2016 LK04_RS06155 e1fa4cf213ed43381ed3440aa0af497a 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06155 e1fa4cf213ed43381ed3440aa0af497a 257 SMART SM00382 57 229 3.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06155 e1fa4cf213ed43381ed3440aa0af497a 257 Pfam PF00005 ABC transporter 48 180 3.9E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS18335 7dc06d1832d12c0373df1299e4935f15 328 PANTHER PTHR24220 5 320 2.4E-220 T 22-04-2016 LK04_RS18335 7dc06d1832d12c0373df1299e4935f15 328 SMART SM00382 32 231 1.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS18335 7dc06d1832d12c0373df1299e4935f15 328 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS18335 7dc06d1832d12c0373df1299e4935f15 328 Pfam PF00005 ABC transporter 24 181 1.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS18335 7dc06d1832d12c0373df1299e4935f15 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.5E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS18335 7dc06d1832d12c0373df1299e4935f15 328 SUPERFAMILY SSF52540 3 253 2.72E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18335 7dc06d1832d12c0373df1299e4935f15 328 PANTHER PTHR24220:SF576 5 320 2.4E-220 T 22-04-2016 LK04_RS18335 7dc06d1832d12c0373df1299e4935f15 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 1.3E-24 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS18335 7dc06d1832d12c0373df1299e4935f15 328 Gene3D G3DSA:3.40.50.300 2 255 2.9E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06330 5aaa98c7c84f47ecacc8e386a27bfc89 352 Pfam PF13515 Fusaric acid resistance protein-like 33 159 4.8E-14 T 22-04-2016 LK04_RS06330 5aaa98c7c84f47ecacc8e386a27bfc89 352 PANTHER PTHR30509:SF5 1 351 4.0E-147 T 22-04-2016 LK04_RS06330 5aaa98c7c84f47ecacc8e386a27bfc89 352 PANTHER PTHR30509 1 351 4.0E-147 T 22-04-2016 LK04_RS03370 0a0ba0b0b42b2b975925692b777cfe75 448 Gene3D G3DSA:1.20.1250.20 13 208 1.9E-46 T 22-04-2016 LK04_RS03370 0a0ba0b0b42b2b975925692b777cfe75 448 Gene3D G3DSA:1.20.1250.20 245 443 8.0E-35 T 22-04-2016 LK04_RS03370 0a0ba0b0b42b2b975925692b777cfe75 448 SUPERFAMILY SSF103473 11 445 2.49E-84 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS03370 0a0ba0b0b42b2b975925692b777cfe75 448 PANTHER PTHR11662 6 447 5.0E-228 T 22-04-2016 LK04_RS03370 0a0ba0b0b42b2b975925692b777cfe75 448 PANTHER PTHR11662:SF18 6 447 5.0E-228 T 22-04-2016 LK04_RS03370 0a0ba0b0b42b2b975925692b777cfe75 448 PIRSF PIRSF002808 1 448 9.2E-48 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS03370 0a0ba0b0b42b2b975925692b777cfe75 448 Pfam PF07690 Major Facilitator Superfamily 25 317 6.7E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS03370 0a0ba0b0b42b2b975925692b777cfe75 448 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 435 2.2E-155 T 22-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS16795 4f2ad4b0eff8a950671004bbb62860d3 231 SUPERFAMILY SSF89562 24 184 3.14E-43 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LK04_RS16795 4f2ad4b0eff8a950671004bbb62860d3 231 PANTHER PTHR33254 12 230 4.6E-50 T 22-04-2016 LK04_RS16795 4f2ad4b0eff8a950671004bbb62860d3 231 Gene3D G3DSA:3.50.30.40 26 184 1.1E-48 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LK04_RS16795 4f2ad4b0eff8a950671004bbb62860d3 231 PANTHER PTHR33254:SF5 12 230 4.6E-50 T 22-04-2016 LK04_RS16795 4f2ad4b0eff8a950671004bbb62860d3 231 Pfam PF03737 Demethylmenaquinone methyltransferase 30 177 1.1E-42 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LK04_RS06730 b523180a0e4c364a37f36884fe7ce380 286 Gene3D G3DSA:3.20.20.70 1 286 4.8E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS06730 b523180a0e4c364a37f36884fe7ce380 286 SUPERFAMILY SSF51569 1 286 6.96E-87 T 22-04-2016 LK04_RS06730 b523180a0e4c364a37f36884fe7ce380 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 286 1.8E-82 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS06730 b523180a0e4c364a37f36884fe7ce380 286 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS06730 b523180a0e4c364a37f36884fe7ce380 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 285 1.6E-94 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS06730 b523180a0e4c364a37f36884fe7ce380 286 PIRSF PIRSF001359 1 286 1.3E-99 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS06730 b523180a0e4c364a37f36884fe7ce380 286 PANTHER PTHR30304 1 286 3.1E-89 T 22-04-2016 LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 Pfam PF00005 ABC transporter 369 512 6.5E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 SUPERFAMILY SSF52540 364 582 6.78E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 PANTHER PTHR24221 1 589 0.0 T 22-04-2016 LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 SMART SM00382 376 560 4.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 Pfam PF00664 ABC transporter transmembrane region 29 292 2.6E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 PANTHER PTHR24221:SF261 1 589 0.0 T 22-04-2016 LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 Gene3D G3DSA:1.20.1560.10 21 330 7.5E-41 T 22-04-2016 LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 23 556 5.5E-180 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 SUPERFAMILY SSF90123 11 333 2.49E-48 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 Gene3D G3DSA:3.40.50.300 362 585 2.0E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12150 fc5701a7b3a0f7bdd51255524a383167 589 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS05090 c0fa319975ac7fd5f49c992947685066 498 PIRSF PIRSF007349 1 491 1.2E-193 T 22-04-2016 IPR007067 Tail sheath protein LK04_RS05090 c0fa319975ac7fd5f49c992947685066 498 Pfam PF04984 Phage tail sheath protein 10 489 2.3E-58 T 22-04-2016 IPR007067 Tail sheath protein LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 Gene3D G3DSA:3.30.830.10 275 507 3.8E-64 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 Gene3D G3DSA:3.30.830.10 508 736 3.4E-52 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 Pfam PF16187 Middle or third domain of peptidase_M16 401 675 4.9E-55 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 SUPERFAMILY SSF63411 753 960 1.05E-42 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 Gene3D G3DSA:3.30.830.10 737 962 2.3E-51 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 SUPERFAMILY SSF63411 505 729 2.44E-39 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 Gene3D G3DSA:3.30.830.10 30 265 1.0E-56 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 SUPERFAMILY SSF63411 266 503 3.14E-66 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 Pfam PF00675 Insulinase (Peptidase family M16) 56 192 2.5E-32 T 22-04-2016 IPR011765 Peptidase M16, N-terminal LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 SUPERFAMILY SSF63411 32 261 7.13E-47 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 PANTHER PTHR11851:SF135 7 395 0.0 T 22-04-2016 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 PANTHER PTHR11851:SF135 412 929 0.0 T 22-04-2016 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 Pfam PF05193 Peptidase M16 inactive domain 217 392 7.6E-21 T 22-04-2016 IPR007863 Peptidase M16, C-terminal LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 Pfam PF05193 Peptidase M16 inactive domain 683 859 3.3E-8 T 22-04-2016 IPR007863 Peptidase M16, C-terminal LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 PANTHER PTHR11851 7 395 0.0 T 22-04-2016 LK04_RS03245 f6b66d4eda16c2d7d586cc3c8a0e107d 965 PANTHER PTHR11851 412 929 0.0 T 22-04-2016 LK04_RS16855 8a8b71dff43bd108f608a00302230209 245 SMART SM00382 29 216 5.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS16855 8a8b71dff43bd108f608a00302230209 245 Pfam PF00005 ABC transporter 20 168 5.8E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS16855 8a8b71dff43bd108f608a00302230209 245 PIRSF PIRSF039085 1 244 1.0E-107 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS16855 8a8b71dff43bd108f608a00302230209 245 PANTHER PTHR24220 6 245 4.4E-141 T 22-04-2016 LK04_RS16855 8a8b71dff43bd108f608a00302230209 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS16855 8a8b71dff43bd108f608a00302230209 245 SUPERFAMILY SSF52540 4 238 1.27E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16855 8a8b71dff43bd108f608a00302230209 245 PANTHER PTHR24220:SF474 6 245 4.4E-141 T 22-04-2016 LK04_RS16855 8a8b71dff43bd108f608a00302230209 245 Gene3D G3DSA:3.40.50.300 3 239 8.9E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 PANTHER PTHR10000:SF20 1 266 3.1E-131 T 22-04-2016 LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 231 8.7E-30 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 4.9E-64 T 22-04-2016 IPR000150 Cof protein GO:0016787 LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 SUPERFAMILY SSF56784 1 265 1.99E-67 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 Gene3D G3DSA:3.40.50.1000 1 72 7.4E-56 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 Gene3D G3DSA:3.40.50.1000 177 265 7.4E-56 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 PANTHER PTHR10000 1 266 3.1E-131 T 22-04-2016 LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 2.9E-60 T 22-04-2016 IPR023214 HAD-like domain LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 Gene3D G3DSA:3.30.1240.10 83 176 4.2E-20 T 22-04-2016 LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 22-04-2016 LK04_RS18005 3dda1a969c2a5b86756019d6c14ddd91 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 LK04_RS03655 0e26bb5cfec4fc5b0b7513bba7a28670 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 2.1E-59 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 LK04_RS03655 0e26bb5cfec4fc5b0b7513bba7a28670 182 Pfam PF05239 PRC-barrel domain 105 177 6.2E-8 T 22-04-2016 IPR027275 PRC-barrel domain LK04_RS03655 0e26bb5cfec4fc5b0b7513bba7a28670 182 Pfam PF01782 RimM N-terminal domain 16 96 6.3E-27 T 22-04-2016 IPR002676 RimM protein GO:0006364 LK04_RS03655 0e26bb5cfec4fc5b0b7513bba7a28670 182 Gene3D G3DSA:2.30.30.240 106 182 1.3E-30 T 22-04-2016 LK04_RS03655 0e26bb5cfec4fc5b0b7513bba7a28670 182 PANTHER PTHR33692 1 180 8.2E-63 T 22-04-2016 LK04_RS03655 0e26bb5cfec4fc5b0b7513bba7a28670 182 Gene3D G3DSA:2.40.30.60 8 100 1.3E-35 T 22-04-2016 IPR002676 RimM protein GO:0006364 LK04_RS03655 0e26bb5cfec4fc5b0b7513bba7a28670 182 SUPERFAMILY SSF50346 106 182 1.37E-20 T 22-04-2016 IPR011033 PRC-barrel-like LK04_RS03655 0e26bb5cfec4fc5b0b7513bba7a28670 182 SUPERFAMILY SSF50447 13 99 3.88E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS03655 0e26bb5cfec4fc5b0b7513bba7a28670 182 PANTHER PTHR33692:SF1 1 180 8.2E-63 T 22-04-2016 LK04_RS03655 0e26bb5cfec4fc5b0b7513bba7a28670 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.249 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 LK04_RS13805 aeaed1240d09d3301158048f1dc45873 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 5.1E-34 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LK04_RS13805 aeaed1240d09d3301158048f1dc45873 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.1E-40 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LK04_RS13805 aeaed1240d09d3301158048f1dc45873 109 PANTHER PTHR33449:SF1 1 109 4.9E-53 T 22-04-2016 LK04_RS13805 aeaed1240d09d3301158048f1dc45873 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 22.771 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LK04_RS13805 aeaed1240d09d3301158048f1dc45873 109 SUPERFAMILY SSF82607 11 103 4.84E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LK04_RS13805 aeaed1240d09d3301158048f1dc45873 109 Gene3D G3DSA:3.30.1310.10 1 109 1.7E-49 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LK04_RS13805 aeaed1240d09d3301158048f1dc45873 109 PANTHER PTHR33449 1 109 4.9E-53 T 22-04-2016 LK04_RS13805 aeaed1240d09d3301158048f1dc45873 109 PIRSF PIRSF004555 3 109 6.0E-38 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LK04_RS11750 dafb90b4681a20e24ae36b3d5d0152d5 173 PANTHER PTHR30466 9 173 1.1E-63 T 22-04-2016 LK04_RS11750 dafb90b4681a20e24ae36b3d5d0152d5 173 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 9 172 44.031 T 22-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 LK04_RS11750 dafb90b4681a20e24ae36b3d5d0152d5 173 Gene3D G3DSA:2.30.110.10 9 166 1.0E-54 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS11750 dafb90b4681a20e24ae36b3d5d0152d5 173 Pfam PF01613 Flavin reductase like domain 21 167 3.7E-31 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LK04_RS11750 dafb90b4681a20e24ae36b3d5d0152d5 173 PANTHER PTHR30466:SF2 9 173 1.1E-63 T 22-04-2016 LK04_RS11750 dafb90b4681a20e24ae36b3d5d0152d5 173 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 12 167 3.6E-81 T 22-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 LK04_RS11750 dafb90b4681a20e24ae36b3d5d0152d5 173 SUPERFAMILY SSF50475 12 167 6.87E-48 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS11750 dafb90b4681a20e24ae36b3d5d0152d5 173 SMART SM00903 21 166 4.3E-54 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 9.7E-8 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 9.7E-8 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 9.7E-8 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 9.7E-8 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 Pfam PF00970 Oxidoreductase FAD-binding domain 157 252 7.4E-9 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 Gene3D G3DSA:3.40.50.80 258 392 7.4E-31 T 22-04-2016 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 51.778 T 22-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 Pfam PF00042 Globin 7 102 4.1E-11 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 SUPERFAMILY SSF63380 148 253 9.7E-28 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 Gene3D G3DSA:2.40.30.10 149 254 3.5E-32 T 22-04-2016 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 2.2E-11 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 SUPERFAMILY SSF52343 257 392 1.14E-31 T 22-04-2016 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 PANTHER PTHR22924 1 394 1.3E-113 T 22-04-2016 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 Gene3D G3DSA:1.10.490.10 2 140 2.0E-50 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 LK04_RS04105 695ad7fdfb765ebc162a0a9afef621a3 394 SUPERFAMILY SSF46458 1 141 3.16E-36 T 22-04-2016 IPR009050 Globin-like LK04_RS12025 e3807dbdae2b2da33ad24bbf11d68d61 261 PANTHER PTHR30336:SF1 1 251 2.1E-67 T 22-04-2016 LK04_RS12025 e3807dbdae2b2da33ad24bbf11d68d61 261 PANTHER PTHR30336 1 251 2.1E-67 T 22-04-2016 LK04_RS12025 e3807dbdae2b2da33ad24bbf11d68d61 261 Pfam PF02698 DUF218 domain 80 243 2.5E-25 T 22-04-2016 IPR003848 Domain of unknown function DUF218 LK04_RS12025 e3807dbdae2b2da33ad24bbf11d68d61 261 Gene3D G3DSA:3.40.50.620 75 210 9.8E-17 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS15675 64a616e6b5bff7f24d2c53097c5771a6 359 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 21 319 1.6E-77 T 22-04-2016 IPR010732 Type VI secretion, TssG-like LK04_RS15675 64a616e6b5bff7f24d2c53097c5771a6 359 PANTHER PTHR35564:SF3 3 351 1.0E-105 T 22-04-2016 LK04_RS15675 64a616e6b5bff7f24d2c53097c5771a6 359 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 21 319 1.3E-72 T 22-04-2016 IPR010732 Type VI secretion, TssG-like LK04_RS15675 64a616e6b5bff7f24d2c53097c5771a6 359 PANTHER PTHR35564 3 351 1.0E-105 T 22-04-2016 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 SUPERFAMILY SSF52922 256 412 3.0E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 PIRSF PIRSF000159 1 1175 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Gene3D G3DSA:3.40.920.10 417 619 1.8E-75 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Pfam PF10371 Domain of unknown function 626 678 1.4E-23 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 PANTHER PTHR32154:SF0 1 1175 0.0 T 22-04-2016 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 SMART SM00890 622 679 4.4E-30 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 SUPERFAMILY SSF52518 796 1169 7.95E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 7.4E-9 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Gene3D G3DSA:1.10.1060.10 669 770 1.2E-20 T 22-04-2016 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Gene3D G3DSA:3.40.50.920 255 414 5.0E-61 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 608 3.3E-33 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1168 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 1.2E-9 T 22-04-2016 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 SUPERFAMILY SSF54862 665 837 1.09E-21 T 22-04-2016 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 SUPERFAMILY SSF53323 418 668 1.44E-73 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Gene3D G3DSA:4.10.780.10 628 668 1.1E-20 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 SUPERFAMILY SSF52518 2 254 6.47E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 1.5E-14 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Gene3D G3DSA:3.40.50.970 797 1169 4.0E-126 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 PANTHER PTHR32154 1 1175 0.0 T 22-04-2016 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 5.8E-78 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 LK04_RS08465 8f194394b430401f3d61f01c1c6cbcef 1175 Gene3D G3DSA:3.40.50.970 1 254 5.6E-107 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 3.0E-19 T 22-04-2016 IPR033248 Transketolase, C-terminal domain LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 Gene3D G3DSA:3.40.50.970 328 533 2.7E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 SUPERFAMILY SSF52922 533 663 4.45E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 Gene3D G3DSA:3.40.50.970 5 322 1.4E-133 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 7.8E-171 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 SUPERFAMILY SSF52518 332 526 5.56E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 Gene3D G3DSA:3.40.50.920 538 663 1.2E-50 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 SUPERFAMILY SSF52518 5 321 3.21E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 2.1E-44 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 PANTHER PTHR11624:SF85 334 663 0.0 T 22-04-2016 LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 PANTHER PTHR11624:SF85 1 310 0.0 T 22-04-2016 LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 PANTHER PTHR11624 334 663 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 PANTHER PTHR11624 1 310 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS02870 e32169dc64d3ce5712fda7295037d276 663 SMART SM00861 355 525 5.5E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS13115 f50c96a22a6f5ed88559603bfd15a4c4 129 PIRSF PIRSF000178 2 129 7.3E-31 T 22-04-2016 LK04_RS13115 f50c96a22a6f5ed88559603bfd15a4c4 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 2.0E-38 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 LK04_RS13115 f50c96a22a6f5ed88559603bfd15a4c4 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 LK04_RS13115 f50c96a22a6f5ed88559603bfd15a4c4 129 PANTHER PTHR10978 3 129 1.3E-74 T 22-04-2016 LK04_RS13115 f50c96a22a6f5ed88559603bfd15a4c4 129 PANTHER PTHR10978:SF4 3 129 1.3E-74 T 22-04-2016 LK04_RS13115 f50c96a22a6f5ed88559603bfd15a4c4 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 1.1E-29 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 LK04_RS13115 f50c96a22a6f5ed88559603bfd15a4c4 129 SUPERFAMILY SSF81343 3 129 8.18E-34 T 22-04-2016 LK04_RS13115 f50c96a22a6f5ed88559603bfd15a4c4 129 Gene3D G3DSA:1.20.1300.10 3 129 3.1E-41 T 22-04-2016 LK04_RS07825 1fc6fbefe9a3fe0742a67d1dc1c3472b 520 PANTHER PTHR33121:SF9 1 511 2.3E-140 T 22-04-2016 LK04_RS07825 1fc6fbefe9a3fe0742a67d1dc1c3472b 520 Pfam PF00563 EAL domain 276 501 1.7E-63 T 22-04-2016 IPR001633 EAL domain LK04_RS07825 1fc6fbefe9a3fe0742a67d1dc1c3472b 520 Pfam PF12792 CSS motif domain associated with EAL 44 233 7.3E-26 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LK04_RS07825 1fc6fbefe9a3fe0742a67d1dc1c3472b 520 SMART SM00052 265 506 4.4E-95 T 22-04-2016 IPR001633 EAL domain LK04_RS07825 1fc6fbefe9a3fe0742a67d1dc1c3472b 520 Gene3D G3DSA:3.20.20.450 272 514 7.5E-76 T 22-04-2016 IPR001633 EAL domain LK04_RS07825 1fc6fbefe9a3fe0742a67d1dc1c3472b 520 PANTHER PTHR33121 1 511 2.3E-140 T 22-04-2016 LK04_RS07825 1fc6fbefe9a3fe0742a67d1dc1c3472b 520 SUPERFAMILY SSF141868 273 514 3.4E-74 T 22-04-2016 IPR001633 EAL domain LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 SUPERFAMILY SSF53098 2 210 4.34E-64 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 SUPERFAMILY SSF47819 194 301 1.78E-28 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 SUPERFAMILY SSF47819 296 371 4.12E-20 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 Pfam PF01612 3'-5' exonuclease 3 170 5.6E-40 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 SMART SM00341 210 289 8.3E-15 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 Gene3D G3DSA:3.30.420.10 2 178 5.8E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 SMART SM00474 3 171 1.5E-41 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 2.1E-139 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 PANTHER PTHR12124:SF42 1 361 5.3E-82 T 22-04-2016 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 Pfam PF00570 HRDC domain 213 278 7.4E-12 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 44.373 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 LK04_RS07875 6f9a617b968ce4826ca2bc9288f4afe9 373 PANTHER PTHR12124 1 361 5.3E-82 T 22-04-2016 LK04_RS18970 33bb79fc7d7201ce78c278ccceee539a 257 Pfam PF00005 ABC transporter 26 181 1.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS18970 33bb79fc7d7201ce78c278ccceee539a 257 Gene3D G3DSA:3.40.50.300 11 251 3.4E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18970 33bb79fc7d7201ce78c278ccceee539a 257 PANTHER PTHR24220:SF560 12 252 1.3E-196 T 22-04-2016 LK04_RS18970 33bb79fc7d7201ce78c278ccceee539a 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS18970 33bb79fc7d7201ce78c278ccceee539a 257 SMART SM00382 35 237 2.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS18970 33bb79fc7d7201ce78c278ccceee539a 257 SUPERFAMILY SSF52540 11 243 5.56E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18970 33bb79fc7d7201ce78c278ccceee539a 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 257 2.8E-121 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 LK04_RS18970 33bb79fc7d7201ce78c278ccceee539a 257 PANTHER PTHR24220 12 252 1.3E-196 T 22-04-2016 LK04_RS04395 a34c6f23cff8edd48530f02d57f351f2 276 PANTHER PTHR12905:SF7 42 218 3.6E-29 T 22-04-2016 LK04_RS04395 a34c6f23cff8edd48530f02d57f351f2 276 Pfam PF00149 Calcineurin-like phosphoesterase 8 201 7.2E-21 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LK04_RS04395 a34c6f23cff8edd48530f02d57f351f2 276 PANTHER PTHR12905 3 25 3.6E-29 T 22-04-2016 LK04_RS04395 a34c6f23cff8edd48530f02d57f351f2 276 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 6 259 37.199 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 LK04_RS04395 a34c6f23cff8edd48530f02d57f351f2 276 SUPERFAMILY SSF56300 8 263 2.73E-59 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS04395 a34c6f23cff8edd48530f02d57f351f2 276 PANTHER PTHR12905:SF7 3 25 3.6E-29 T 22-04-2016 LK04_RS04395 a34c6f23cff8edd48530f02d57f351f2 276 PANTHER PTHR12905 42 218 3.6E-29 T 22-04-2016 LK04_RS04395 a34c6f23cff8edd48530f02d57f351f2 276 Gene3D G3DSA:3.60.21.10 8 231 3.9E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS10550 017502ab49efa4cab91a42a436d88618 165 PANTHER PTHR38102 1 149 6.5E-49 T 22-04-2016 LK04_RS10550 017502ab49efa4cab91a42a436d88618 165 Pfam PF07813 LTXXQ motif family protein 46 142 8.3E-22 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 LK04_RS10550 017502ab49efa4cab91a42a436d88618 165 PANTHER PTHR38102:SF1 1 149 6.5E-49 T 22-04-2016 LK04_RS10550 017502ab49efa4cab91a42a436d88618 165 PIRSF PIRSF034445 1 153 3.8E-28 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 LK04_RS19100 c4fe7aa7da123d6bb7763aadc2aa74e3 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 2.6E-48 T 22-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 LK04_RS19100 c4fe7aa7da123d6bb7763aadc2aa74e3 139 SUPERFAMILY SSF102546 1 139 4.97E-44 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 LK04_RS19100 c4fe7aa7da123d6bb7763aadc2aa74e3 139 PANTHER PTHR37831:SF1 2 139 8.8E-68 T 22-04-2016 LK04_RS19100 c4fe7aa7da123d6bb7763aadc2aa74e3 139 PANTHER PTHR37831 2 139 8.8E-68 T 22-04-2016 LK04_RS19100 c4fe7aa7da123d6bb7763aadc2aa74e3 139 Gene3D G3DSA:3.40.1650.10 1 139 2.3E-43 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 LK04_RS19100 c4fe7aa7da123d6bb7763aadc2aa74e3 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.167 T 22-04-2016 IPR023064 D-ribose pyranase GO:0016872 UniPathway: UPA00916 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 2.8E-121 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 SUPERFAMILY SSF52374 3 298 1.39E-113 T 22-04-2016 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 465 6.2E-203 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 Gene3D G3DSA:1.10.1160.10 233 314 3.2E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 463 34.181 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 SUPERFAMILY SSF48163 299 463 9.55E-43 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 PANTHER PTHR11451:SF41 2 336 1.7E-103 T 22-04-2016 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 Gene3D G3DSA:3.40.50.620 181 230 4.8E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 Gene3D G3DSA:3.40.50.620 2 67 4.8E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 PANTHER PTHR11451 2 336 1.7E-103 T 22-04-2016 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 7.6E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 7.6E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 7.6E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 7.6E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 7.6E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 Gene3D G3DSA:3.90.800.10 68 180 5.3E-40 T 22-04-2016 LK04_RS04730 29de98b04d8fec1f66737230f2a1f526 473 Gene3D G3DSA:1.10.10.350 363 464 6.5E-29 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LK04_RS13140 1b4e9e20b24dbb7d255defca7dc09cbf 242 PANTHER PTHR41293:SF1 2 242 3.5E-110 T 22-04-2016 LK04_RS13140 1b4e9e20b24dbb7d255defca7dc09cbf 242 PANTHER PTHR41293 2 242 3.5E-110 T 22-04-2016 LK04_RS13140 1b4e9e20b24dbb7d255defca7dc09cbf 242 Pfam PF06149 Protein of unknown function (DUF969) 8 224 8.5E-90 T 22-04-2016 IPR010374 Protein of unknown function DUF969 LK04_RS12285 817f0b7f35dfa270fa87b30143fb2bf4 240 SUPERFAMILY SSF55469 1 239 3.27E-70 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 LK04_RS12285 817f0b7f35dfa270fa87b30143fb2bf4 240 PANTHER PTHR23026:SF98 1 185 3.2E-69 T 22-04-2016 LK04_RS12285 817f0b7f35dfa270fa87b30143fb2bf4 240 PANTHER PTHR23026 1 185 3.2E-69 T 22-04-2016 LK04_RS12285 817f0b7f35dfa270fa87b30143fb2bf4 240 Pfam PF00881 Nitroreductase family 11 158 8.6E-17 T 22-04-2016 IPR029479 Nitroreductase LK04_RS12285 817f0b7f35dfa270fa87b30143fb2bf4 240 PIRSF PIRSF005426 1 240 2.5E-82 T 22-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 LK04_RS12285 817f0b7f35dfa270fa87b30143fb2bf4 240 Gene3D G3DSA:3.40.109.10 2 239 3.3E-72 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 LK04_RS00965 679203db1088fdd7c0fb0dac8f8c058d 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.366 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 LK04_RS00965 679203db1088fdd7c0fb0dac8f8c058d 144 Gene3D G3DSA:3.100.10.10 32 143 1.5E-26 T 22-04-2016 LK04_RS00965 679203db1088fdd7c0fb0dac8f8c058d 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00965 679203db1088fdd7c0fb0dac8f8c058d 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 9.4E-51 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 LK04_RS00965 679203db1088fdd7c0fb0dac8f8c058d 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 8.3E-32 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P LK04_RS00965 679203db1088fdd7c0fb0dac8f8c058d 144 SUPERFAMILY SSF52080 4 143 6.41E-47 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P LK04_RS00965 679203db1088fdd7c0fb0dac8f8c058d 144 PANTHER PTHR12934 1 144 1.6E-73 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 LK04_RS13135 884b1d5015674a19f0a0848926ccab3e 338 Gene3D G3DSA:1.20.20.10 67 127 6.8E-4 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 LK04_RS13135 884b1d5015674a19f0a0848926ccab3e 338 Pfam PF06166 Protein of unknown function (DUF979) 6 337 3.3E-125 T 22-04-2016 IPR009323 Protein of unknown function DUF979 LK04_RS17780 8c4ad75d18962fe264b6d0ae63f08af7 120 SUPERFAMILY SSF48300 3 57 1.44E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS17780 8c4ad75d18962fe264b6d0ae63f08af7 120 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 120 1.0E-25 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 LK04_RS17780 8c4ad75d18962fe264b6d0ae63f08af7 120 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 120 6.0E-14 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 LK04_RS17780 8c4ad75d18962fe264b6d0ae63f08af7 120 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 2.6E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS17780 8c4ad75d18962fe264b6d0ae63f08af7 120 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 120 1.2E-41 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS17780 8c4ad75d18962fe264b6d0ae63f08af7 120 Gene3D G3DSA:3.30.1390.10 51 120 1.9E-28 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LK04_RS17780 8c4ad75d18962fe264b6d0ae63f08af7 120 Gene3D G3DSA:1.20.5.710 2 50 4.5E-23 T 22-04-2016 LK04_RS17780 8c4ad75d18962fe264b6d0ae63f08af7 120 SUPERFAMILY SSF54736 50 120 4.53E-22 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LK04_RS17780 8c4ad75d18962fe264b6d0ae63f08af7 120 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 120 23.966 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 Gene3D G3DSA:1.10.8.60 364 448 5.7E-26 T 22-04-2016 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 SUPERFAMILY SSF81923 12 126 1.96E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 PANTHER PTHR11638:SF122 1 146 0.0 T 22-04-2016 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 PANTHER PTHR11638:SF122 178 845 0.0 T 22-04-2016 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 Gene3D G3DSA:3.40.50.300 557 783 2.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 314 326 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 846 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 PANTHER PTHR11638 1 146 0.0 T 22-04-2016 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 PANTHER PTHR11638 178 845 0.0 T 22-04-2016 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 Gene3D G3DSA:1.10.1780.10 10 129 3.3E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 Gene3D G3DSA:1.10.8.60 784 866 1.9E-9 T 22-04-2016 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 223 335 3.5E-10 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 SMART SM01086 773 864 1.3E-6 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 9.0E-33 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 9.0E-33 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 9.0E-33 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 9.0E-33 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 SUPERFAMILY SSF52540 180 510 1.65E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 Gene3D G3DSA:3.40.50.300 181 362 3.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 773 844 2.1E-11 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 SUPERFAMILY SSF52540 550 835 3.66E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 767 1.8E-39 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 SMART SM00382 601 761 4.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS09270 e1f381ee026483946d09251bdaeaf83f 873 SMART SM00382 218 363 2.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS03340 87ad072c7b72c71c7878e59d42c4cf58 182 Hamap MF_01104 Protein Syd [syd]. 3 181 35.856 T 22-04-2016 IPR009948 Syd GO:0009898 LK04_RS03340 87ad072c7b72c71c7878e59d42c4cf58 182 Pfam PF07348 Syd protein (SUKH-2) 7 179 8.8E-73 T 22-04-2016 IPR009948 Syd GO:0009898 LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 SUPERFAMILY SSF53271 252 485 1.23E-70 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 PANTHER PTHR11907 1 480 4.9E-258 T 22-04-2016 LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 Gene3D G3DSA:3.60.20.10 2 260 1.6E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 PIRSF PIRSF000485 1 483 1.9E-170 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 Gene3D G3DSA:3.40.50.2020 280 446 3.9E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 Pfam PF13522 Glutamine amidotransferase domain 64 209 4.0E-16 T 22-04-2016 LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 4.0E-162 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 SUPERFAMILY SSF56235 2 259 4.46E-74 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 1.5E-6 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 PANTHER PTHR11907:SF0 1 480 4.9E-258 T 22-04-2016 LK04_RS05385 13124c7156fe8cf88910d55dcf3c5f04 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 45.004 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 PANTHER PTHR11985:SF1 130 562 8.3E-103 T 22-04-2016 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 PANTHER PTHR11985:SF1 1 109 8.3E-103 T 22-04-2016 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 428 548 3.9E-20 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 Pfam PF01266 FAD dependent oxidoreductase 22 384 4.9E-38 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 32 1.7E-10 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 356 362 1.7E-10 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 392 404 1.7E-10 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 94 106 1.7E-10 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 SUPERFAMILY SSF51905 131 263 1.41E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 SUPERFAMILY SSF51905 22 100 1.41E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 SUPERFAMILY SSF51905 375 415 1.41E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 Gene3D G3DSA:3.50.50.60 179 304 4.7E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 Gene3D G3DSA:3.50.50.60 22 134 4.7E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 PANTHER PTHR11985 130 562 8.3E-103 T 22-04-2016 LK04_RS08845 8819c2e0fbeb948b8df967bbb3450adf 584 PANTHER PTHR11985 1 109 8.3E-103 T 22-04-2016 LK04_RS18180 e7ee3227c916ff9837f8f615bc541392 349 PANTHER PTHR32309:SF16 3 340 5.2E-169 T 22-04-2016 LK04_RS18180 e7ee3227c916ff9837f8f615bc541392 349 Gene3D G3DSA:3.30.1890.10 252 313 1.9E-78 T 22-04-2016 LK04_RS18180 e7ee3227c916ff9837f8f615bc541392 349 Gene3D G3DSA:3.30.1890.10 48 216 1.9E-78 T 22-04-2016 LK04_RS18180 e7ee3227c916ff9837f8f615bc541392 349 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 1 342 53.57 T 22-04-2016 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 UniPathway: UPA00566 LK04_RS18180 e7ee3227c916ff9837f8f615bc541392 349 SUPERFAMILY SSF160355 48 313 4.19E-74 T 22-04-2016 LK04_RS18180 e7ee3227c916ff9837f8f615bc541392 349 PANTHER PTHR32309 3 340 5.2E-169 T 22-04-2016 LK04_RS18180 e7ee3227c916ff9837f8f615bc541392 349 Pfam PF02706 Chain length determinant protein 8 201 1.1E-10 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 SUPERFAMILY SSF46785 6 76 4.32E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 1.1E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 Gene3D G3DSA:1.10.10.10 7 76 1.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 SUPERFAMILY SSF48008 96 225 1.2E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 SMART SM00345 15 74 1.0E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.9E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.9E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 PANTHER PTHR11751 13 76 1.2E-20 T 22-04-2016 LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 PANTHER PTHR11751 93 116 1.2E-20 T 22-04-2016 LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 Gene3D G3DSA:1.20.120.530 94 231 4.8E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 Pfam PF07729 FCD domain 104 217 1.7E-18 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS10845 23be3012773ec250bbd8dd53e8cb84a9 233 SMART SM00895 100 222 1.7E-12 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 Gene3D G3DSA:1.20.1440.90 273 388 2.6E-31 T 22-04-2016 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.281 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 PANTHER PTHR30523:SF3 1 883 0.0 T 22-04-2016 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 PANTHER PTHR30523 1 883 0.0 T 22-04-2016 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 1.4E-291 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 7.7E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 7.7E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 7.7E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 7.7E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 7.7E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 7.7E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 7.7E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LK04_RS19650 35fe3be163d11d4c2639efa4d602970c 883 SUPERFAMILY SSF51621 6 883 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 Pfam PF01433 Peptidase family M1 106 384 5.8E-68 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 SUPERFAMILY SSF55486 204 450 1.26E-74 T 22-04-2016 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 1.5E-7 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 1.5E-7 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 1.5E-7 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 1.5E-7 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 Gene3D G3DSA:1.10.390.10 308 451 7.6E-35 T 22-04-2016 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 PANTHER PTHR11533:SF152 609 870 0.0 T 22-04-2016 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 PANTHER PTHR11533:SF152 6 586 0.0 T 22-04-2016 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 PANTHER PTHR11533 609 870 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 PANTHER PTHR11533 6 586 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 Gene3D G3DSA:1.25.50.10 547 870 2.4E-125 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 Pfam PF11940 Domain of unknown function (DUF3458) 460 827 1.2E-138 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal LK04_RS11965 34ce2ddca4ed33a8a22469e5be619bb3 871 SUPERFAMILY SSF63737 1 193 2.35E-47 T 22-04-2016 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 Pfam PF04545 Sigma-70, region 4 262 315 1.8E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 SUPERFAMILY SSF88659 167 241 8.72E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 Gene3D G3DSA:1.10.10.10 167 216 2.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 Pfam PF04539 Sigma-70 region 3 174 248 8.9E-21 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 328 2.6E-144 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 87 9.2E-11 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 Pfam PF04542 Sigma-70 region 2 94 163 2.9E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 SUPERFAMILY SSF88946 56 164 2.35E-45 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 SUPERFAMILY SSF88659 225 323 1.42E-23 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 91 317 4.0E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 PANTHER PTHR30603:SF15 14 329 1.8E-206 T 22-04-2016 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 6 328 39.78 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 PANTHER PTHR30603 14 329 1.8E-206 T 22-04-2016 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 Gene3D G3DSA:1.10.601.10 51 163 5.6E-55 T 22-04-2016 LK04_RS03530 cd1b526cd812b3a32c44135bc398cf84 330 Gene3D G3DSA:1.10.10.10 257 322 2.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01275 15bc85b37fbbb7d9a4fce03291c6d2cf 1111 PANTHER PTHR30347 1 1110 0.0 T 22-04-2016 LK04_RS01275 15bc85b37fbbb7d9a4fce03291c6d2cf 1111 Pfam PF00924 Mechanosensitive ion channel 879 1078 2.1E-51 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LK04_RS01275 15bc85b37fbbb7d9a4fce03291c6d2cf 1111 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 482 818 8.7E-114 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 LK04_RS01275 15bc85b37fbbb7d9a4fce03291c6d2cf 1111 SUPERFAMILY SSF82861 837 920 4.71E-8 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LK04_RS01275 15bc85b37fbbb7d9a4fce03291c6d2cf 1111 SUPERFAMILY SSF50182 922 987 2.39E-16 T 22-04-2016 IPR010920 LSM domain LK04_RS01275 15bc85b37fbbb7d9a4fce03291c6d2cf 1111 PANTHER PTHR30347:SF0 1 1110 0.0 T 22-04-2016 LK04_RS01275 15bc85b37fbbb7d9a4fce03291c6d2cf 1111 Gene3D G3DSA:3.30.70.100 993 1076 6.1E-7 T 22-04-2016 LK04_RS01275 15bc85b37fbbb7d9a4fce03291c6d2cf 1111 SUPERFAMILY SSF82689 989 1087 7.32E-16 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LK04_RS01275 15bc85b37fbbb7d9a4fce03291c6d2cf 1111 Pfam PF12795 Mechanosensitive ion channel porin domain 31 260 4.8E-63 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain LK04_RS01275 15bc85b37fbbb7d9a4fce03291c6d2cf 1111 Gene3D G3DSA:2.30.30.60 937 986 2.1E-15 T 22-04-2016 LK04_RS11390 c9456a8406c3b480c207ce76e4570e2a 224 PANTHER PTHR30435 16 224 4.8E-53 T 22-04-2016 LK04_RS11390 c9456a8406c3b480c207ce76e4570e2a 224 Pfam PF03963 Flagellar hook capping protein - N-terminal region 17 79 1.8E-22 T 22-04-2016 IPR005648 Flagellar hook capping protein LK04_RS11390 c9456a8406c3b480c207ce76e4570e2a 224 PANTHER PTHR30435:SF15 16 224 4.8E-53 T 22-04-2016 LK04_RS11390 c9456a8406c3b480c207ce76e4570e2a 224 Pfam PF13861 FlgD Tudor-like domain 87 221 4.4E-14 T 22-04-2016 IPR025963 FlgD Tudor-like domain LK04_RS11390 c9456a8406c3b480c207ce76e4570e2a 224 Pfam PF13860 FlgD Ig-like domain 106 181 2.0E-23 T 22-04-2016 IPR025965 FlgD Ig-like domain LK04_RS03965 a914f4f4ec87a6d3d22ca7b330cde55f 292 Gene3D G3DSA:2.60.200.30 153 261 1.8E-41 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LK04_RS03965 a914f4f4ec87a6d3d22ca7b330cde55f 292 SUPERFAMILY SSF111331 8 289 3.4E-92 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain LK04_RS03965 a914f4f4ec87a6d3d22ca7b330cde55f 292 Gene3D G3DSA:3.40.50.10330 1 152 2.1E-41 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LK04_RS03965 a914f4f4ec87a6d3d22ca7b330cde55f 292 PANTHER PTHR20275 8 291 6.2E-113 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LK04_RS03965 a914f4f4ec87a6d3d22ca7b330cde55f 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.307 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LK04_RS03965 a914f4f4ec87a6d3d22ca7b330cde55f 292 Pfam PF01513 ATP-NAD kinase 8 271 1.9E-77 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LK04_RS05325 de442dd2c3834350c1eb4765de70d5fd 147 Gene3D G3DSA:3.40.250.10 26 128 3.5E-20 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS05325 de442dd2c3834350c1eb4765de70d5fd 147 SMART SM00450 29 126 5.3E-16 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS05325 de442dd2c3834350c1eb4765de70d5fd 147 SUPERFAMILY SSF52821 13 129 3.93E-22 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS05325 de442dd2c3834350c1eb4765de70d5fd 147 Pfam PF00581 Rhodanese-like domain 39 122 1.3E-12 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 2.1E-63 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 PANTHER PTHR23133 10 97 9.9E-178 T 22-04-2016 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 PANTHER PTHR23133 163 355 9.9E-178 T 22-04-2016 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.537 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 Gene3D G3DSA:3.40.50.1000 1 160 5.6E-44 T 22-04-2016 IPR023214 HAD-like domain LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 Pfam PF13242 HAD-hyrolase-like 103 145 1.0E-6 T 22-04-2016 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 SUPERFAMILY SSF54211 252 342 3.29E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 SUPERFAMILY SSF54211 167 251 2.78E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 145 2.0E-26 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 SUPERFAMILY SSF56784 1 150 1.49E-38 T 22-04-2016 IPR023214 HAD-like domain LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 Gene3D G3DSA:3.30.230.40 167 253 5.5E-38 T 22-04-2016 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 1.4E-77 T 22-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 56.94 T 22-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 PANTHER PTHR23133:SF2 10 97 9.9E-178 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 PANTHER PTHR23133:SF2 163 355 9.9E-178 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 Gene3D G3DSA:3.30.230.40 258 355 2.8E-31 T 22-04-2016 LK04_RS06215 0a8b0e3bf31c85f09930891e9bea707b 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 144 6.9E-47 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 Gene3D G3DSA:2.40.50.100 255 289 2.8E-15 T 22-04-2016 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 Gene3D G3DSA:2.40.50.100 79 108 2.8E-15 T 22-04-2016 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 PANTHER PTHR30386 39 408 6.0E-134 T 22-04-2016 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 PANTHER PTHR30386:SF4 39 408 6.0E-134 T 22-04-2016 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 Pfam PF13437 HlyD family secretion protein 257 366 1.1E-18 T 22-04-2016 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 Pfam PF13533 Biotin-lipoyl like 83 112 1.1E-7 T 22-04-2016 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 202 408 2.4E-66 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 ProSitePatterns PS00543 HlyD family secretion proteins signature. 373 395 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 350 4.3E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 373 388 4.3E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 270 291 4.3E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 388 408 4.3E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 86 106 4.3E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 303 327 4.3E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LK04_RS02795 fd558cb6cf05973aa3151add20288e40 408 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 44 67 4.3E-40 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LK04_RS10350 d13fbd8fa66d7813257b31695ec1be93 407 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 5.1E-176 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LK04_RS10350 d13fbd8fa66d7813257b31695ec1be93 407 Gene3D G3DSA:3.90.1150.10 286 399 7.8E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS10350 d13fbd8fa66d7813257b31695ec1be93 407 Pfam PF00266 Aminotransferase class-V 26 394 5.7E-152 T 22-04-2016 IPR000192 Aminotransferase class V domain LK04_RS10350 d13fbd8fa66d7813257b31695ec1be93 407 Gene3D G3DSA:3.40.640.10 37 285 2.5E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS10350 d13fbd8fa66d7813257b31695ec1be93 407 PANTHER PTHR11601 6 405 4.7E-188 T 22-04-2016 LK04_RS10350 d13fbd8fa66d7813257b31695ec1be93 407 PANTHER PTHR11601:SF17 6 405 4.7E-188 T 22-04-2016 LK04_RS10350 d13fbd8fa66d7813257b31695ec1be93 407 SUPERFAMILY SSF53383 3 402 1.07E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS10350 d13fbd8fa66d7813257b31695ec1be93 407 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 608 625 7.8E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 625 645 7.8E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 Pfam PF02954 Bacterial regulatory protein, Fis family 604 640 1.3E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 PANTHER PTHR32071 312 655 9.7E-148 T 22-04-2016 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 Gene3D G3DSA:3.30.450.40 167 214 2.3E-5 T 22-04-2016 IPR029016 GAF domain-like LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 Gene3D G3DSA:3.40.50.300 338 514 3.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 SUPERFAMILY SSF55781 108 226 4.61E-6 T 22-04-2016 IPR029016 GAF domain-like LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 365 378 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 Gene3D G3DSA:1.10.8.60 515 591 1.4E-25 T 22-04-2016 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 Gene3D G3DSA:1.10.10.60 600 640 8.8E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 555 564 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 428 443 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 Gene3D G3DSA:3.30.450.20 215 256 6.2E-6 T 22-04-2016 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 Pfam PF00158 Sigma-54 interaction domain 342 508 5.1E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 SUPERFAMILY SSF52540 342 585 1.13E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 SUPERFAMILY SSF46689 555 643 2.81E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 SUPERFAMILY SSF55785 217 256 3.81E-5 T 22-04-2016 IPR000014 PAS domain LK04_RS16935 dfdfbc522b4eaa8936c3795aba212bb1 655 SMART SM00382 361 505 1.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS13915 2d3a5cdd1752e25961d553924812cbb7 591 SMART SM00382 366 551 1.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS13915 2d3a5cdd1752e25961d553924812cbb7 591 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS13915 2d3a5cdd1752e25961d553924812cbb7 591 PANTHER PTHR24221 6 584 0.0 T 22-04-2016 LK04_RS13915 2d3a5cdd1752e25961d553924812cbb7 591 SUPERFAMILY SSF52540 335 575 6.1E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13915 2d3a5cdd1752e25961d553924812cbb7 591 Pfam PF00664 ABC transporter transmembrane region 27 295 1.8E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS13915 2d3a5cdd1752e25961d553924812cbb7 591 Gene3D G3DSA:1.20.1560.10 12 323 7.0E-72 T 22-04-2016 LK04_RS13915 2d3a5cdd1752e25961d553924812cbb7 591 Pfam PF00005 ABC transporter 357 505 7.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS13915 2d3a5cdd1752e25961d553924812cbb7 591 PANTHER PTHR24221:SF256 6 584 0.0 T 22-04-2016 LK04_RS13915 2d3a5cdd1752e25961d553924812cbb7 591 Gene3D G3DSA:3.40.50.300 341 577 1.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13915 2d3a5cdd1752e25961d553924812cbb7 591 SUPERFAMILY SSF90123 9 323 7.06E-68 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 Pfam PF00459 Inositol monophosphatase family 2 261 1.3E-74 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 Gene3D G3DSA:3.30.540.10 2 152 9.4E-53 T 22-04-2016 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.8E-36 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.8E-36 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.8E-36 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.8E-36 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PANTHER PTHR20854:SF4 1 267 1.7E-109 T 22-04-2016 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 SUPERFAMILY SSF56655 1 259 6.28E-87 T 22-04-2016 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.0E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.0E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.0E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.0E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.0E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.0E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 Gene3D G3DSA:3.40.190.80 153 260 1.0E-39 T 22-04-2016 LK04_RS04135 00fcfa9d01c1c792d8667f77b0c5ca7e 267 PANTHER PTHR20854 1 267 1.7E-109 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS01750 2cf7b523d5ef2454f2cd5ce80019c75d 269 Gene3D G3DSA:3.40.50.1000 42 246 1.1E-44 T 22-04-2016 IPR023214 HAD-like domain LK04_RS01750 2cf7b523d5ef2454f2cd5ce80019c75d 269 PANTHER PTHR31284 223 239 1.0E-60 T 22-04-2016 LK04_RS01750 2cf7b523d5ef2454f2cd5ce80019c75d 269 PANTHER PTHR31284 39 204 1.0E-60 T 22-04-2016 LK04_RS01750 2cf7b523d5ef2454f2cd5ce80019c75d 269 PIRSF PIRSF019271 1 269 4.7E-103 T 22-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 LK04_RS01750 2cf7b523d5ef2454f2cd5ce80019c75d 269 PANTHER PTHR31284:SF10 223 239 1.0E-60 T 22-04-2016 LK04_RS01750 2cf7b523d5ef2454f2cd5ce80019c75d 269 PANTHER PTHR31284:SF10 39 204 1.0E-60 T 22-04-2016 LK04_RS01750 2cf7b523d5ef2454f2cd5ce80019c75d 269 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 25 239 3.3E-60 T 22-04-2016 IPR005519 Acid phosphatase, class B-like LK04_RS01750 2cf7b523d5ef2454f2cd5ce80019c75d 269 SUPERFAMILY SSF56784 53 247 2.07E-41 T 22-04-2016 IPR023214 HAD-like domain LK04_RS01750 2cf7b523d5ef2454f2cd5ce80019c75d 269 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 4 266 8.3E-86 T 22-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 LK04_RS15130 41af50e45c3da6b7bc044b70dbf54e70 126 PANTHER PTHR21012:SF0 2 126 2.1E-64 T 22-04-2016 LK04_RS15130 41af50e45c3da6b7bc044b70dbf54e70 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 4.0E-59 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 LK04_RS15130 41af50e45c3da6b7bc044b70dbf54e70 126 Gene3D G3DSA:2.40.40.20 1 124 5.4E-53 T 22-04-2016 LK04_RS15130 41af50e45c3da6b7bc044b70dbf54e70 126 Pfam PF02261 Aspartate decarboxylase 1 114 3.2E-46 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 LK04_RS15130 41af50e45c3da6b7bc044b70dbf54e70 126 PANTHER PTHR21012 2 126 2.1E-64 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 LK04_RS15130 41af50e45c3da6b7bc044b70dbf54e70 126 PIRSF PIRSF006246 1 125 4.3E-51 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 LK04_RS15130 41af50e45c3da6b7bc044b70dbf54e70 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-54 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 LK04_RS15130 41af50e45c3da6b7bc044b70dbf54e70 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 67.79 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 LK04_RS15130 41af50e45c3da6b7bc044b70dbf54e70 126 SUPERFAMILY SSF50692 1 120 2.73E-45 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain LK04_RS14435 8e2a576f3e748409681a18535e5aa837 320 SUPERFAMILY SSF52172 189 318 1.42E-22 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS14435 8e2a576f3e748409681a18535e5aa837 320 PIRSF PIRSF002867 1 320 6.3E-102 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV LK04_RS14435 8e2a576f3e748409681a18535e5aa837 320 SMART SM00260 17 161 1.1E-12 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LK04_RS14435 8e2a576f3e748409681a18535e5aa837 320 Gene3D G3DSA:3.40.50.2300 190 319 2.9E-27 T 22-04-2016 LK04_RS14435 8e2a576f3e748409681a18535e5aa837 320 PANTHER PTHR22617 1 177 6.2E-63 T 22-04-2016 LK04_RS14435 8e2a576f3e748409681a18535e5aa837 320 PANTHER PTHR22617:SF37 1 177 6.2E-63 T 22-04-2016 LK04_RS14435 8e2a576f3e748409681a18535e5aa837 320 SMART SM00448 187 312 5.6E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS14435 8e2a576f3e748409681a18535e5aa837 320 Pfam PF00072 Response regulator receiver domain 190 310 1.2E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS14435 8e2a576f3e748409681a18535e5aa837 320 SUPERFAMILY SSF50341 19 165 1.57E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LK04_RS14435 8e2a576f3e748409681a18535e5aa837 320 Pfam PF01584 CheW-like domain 21 163 1.6E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LK04_RS16695 85b8c95d288c0e1871499dd1ac05ab03 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 53.66 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 LK04_RS16695 85b8c95d288c0e1871499dd1ac05ab03 375 PANTHER PTHR12169 1 375 7.5E-190 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 LK04_RS16695 85b8c95d288c0e1871499dd1ac05ab03 375 Pfam PF03969 AFG1-like ATPase 5 370 2.9E-149 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 LK04_RS16695 85b8c95d288c0e1871499dd1ac05ab03 375 SUPERFAMILY SSF52540 70 209 4.98E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16695 85b8c95d288c0e1871499dd1ac05ab03 375 PANTHER PTHR12169:SF11 1 375 7.5E-190 T 22-04-2016 LK04_RS16695 85b8c95d288c0e1871499dd1ac05ab03 375 Gene3D G3DSA:3.40.50.300 3 185 1.8E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17595 a261132499a265413827d3f0ef4d03fb 197 PANTHER PTHR33508 1 197 7.9E-90 T 22-04-2016 LK04_RS17595 a261132499a265413827d3f0ef4d03fb 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 191 5.4E-30 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 LK04_RS17595 a261132499a265413827d3f0ef4d03fb 197 Pfam PF01914 MarC family integral membrane protein 2 194 2.3E-59 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 LK04_RS17595 a261132499a265413827d3f0ef4d03fb 197 PANTHER PTHR33508:SF4 1 197 7.9E-90 T 22-04-2016 LK04_RS01035 565b120d044f1b818e5a4d85a51e9986 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 308 3.7E-115 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS01035 565b120d044f1b818e5a4d85a51e9986 314 PANTHER PTHR11138 2 306 3.0E-123 T 22-04-2016 LK04_RS01035 565b120d044f1b818e5a4d85a51e9986 314 SUPERFAMILY SSF53328 4 207 4.32E-68 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS01035 565b120d044f1b818e5a4d85a51e9986 314 Gene3D G3DSA:3.10.25.10 210 306 9.9E-35 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS01035 565b120d044f1b818e5a4d85a51e9986 314 SUPERFAMILY SSF50486 208 310 1.88E-35 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 LK04_RS01035 565b120d044f1b818e5a4d85a51e9986 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS01035 565b120d044f1b818e5a4d85a51e9986 314 Gene3D G3DSA:3.40.50.170 4 208 8.2E-76 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS01035 565b120d044f1b818e5a4d85a51e9986 314 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 2.2E-30 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS01035 565b120d044f1b818e5a4d85a51e9986 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 37.447 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS01035 565b120d044f1b818e5a4d85a51e9986 314 Pfam PF00551 Formyl transferase 6 183 2.2E-53 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 Gene3D G3DSA:3.40.50.970 474 706 6.1E-118 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 Gene3D G3DSA:3.40.50.920 708 886 2.4E-77 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 Gene3D G3DSA:3.40.50.970 60 470 1.6E-156 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 SUPERFAMILY SSF52518 475 702 4.71E-96 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PANTHER PTHR11624 554 769 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PANTHER PTHR11624 364 453 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PANTHER PTHR11624 76 295 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PANTHER PTHR11624 481 536 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PANTHER PTHR11624 788 870 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PANTHER PTHR11624:SF67 554 769 0.0 T 22-04-2016 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PANTHER PTHR11624:SF67 364 453 0.0 T 22-04-2016 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PANTHER PTHR11624:SF67 76 295 0.0 T 22-04-2016 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PANTHER PTHR11624:SF67 481 536 0.0 T 22-04-2016 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PANTHER PTHR11624:SF67 788 870 0.0 T 22-04-2016 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 887 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 PIRSF PIRSF000156 1 888 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 107 296 1.3E-9 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 362 426 2.4E-5 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 SUPERFAMILY SSF52922 703 886 1.74E-63 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS15280 1c9e6016185323d077ea101812751ecf 888 SUPERFAMILY SSF52518 59 468 2.69E-143 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS07995 a6d670860e77ee894b08b040a80d996f 202 SUPERFAMILY SSF52499 2 202 3.4E-50 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS07995 a6d670860e77ee894b08b040a80d996f 202 PANTHER PTHR11080 1 202 8.3E-63 T 22-04-2016 LK04_RS07995 a6d670860e77ee894b08b040a80d996f 202 PANTHER PTHR11080:SF2 1 202 8.3E-63 T 22-04-2016 LK04_RS07995 a6d670860e77ee894b08b040a80d996f 202 Pfam PF00857 Isochorismatase family 4 202 3.8E-34 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS07995 a6d670860e77ee894b08b040a80d996f 202 Gene3D G3DSA:3.40.50.850 1 202 3.1E-60 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS00255 6d6f822b9b745d228ea961cd609c9d4c 213 PANTHER PTHR14119 1 202 3.6E-114 T 22-04-2016 LK04_RS00255 6d6f822b9b745d228ea961cd609c9d4c 213 SUPERFAMILY SSF52499 3 204 1.44E-47 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS00255 6d6f822b9b745d228ea961cd609c9d4c 213 Gene3D G3DSA:3.40.50.850 5 206 1.9E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS00255 6d6f822b9b745d228ea961cd609c9d4c 213 PANTHER PTHR14119:SF1 1 202 3.6E-114 T 22-04-2016 LK04_RS00255 6d6f822b9b745d228ea961cd609c9d4c 213 Pfam PF00857 Isochorismatase family 12 165 3.3E-23 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS00500 c40b199a37a7750d634ded5923f2ecac 274 Pfam PF01694 Rhomboid family 130 269 7.4E-27 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 LK04_RS00500 c40b199a37a7750d634ded5923f2ecac 274 Gene3D G3DSA:1.20.1540.10 94 266 3.7E-38 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 LK04_RS00500 c40b199a37a7750d634ded5923f2ecac 274 PANTHER PTHR22936 1 274 1.5E-89 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 LK04_RS00500 c40b199a37a7750d634ded5923f2ecac 274 SUPERFAMILY SSF144091 91 268 2.09E-44 T 22-04-2016 LK04_RS00500 c40b199a37a7750d634ded5923f2ecac 274 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 2 269 1.6E-115 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 LK04_RS00500 c40b199a37a7750d634ded5923f2ecac 274 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 2 81 1.0E-25 T 22-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 LK04_RS00500 c40b199a37a7750d634ded5923f2ecac 274 PANTHER PTHR22936:SF30 1 274 1.5E-89 T 22-04-2016 LK04_RS00340 6aeae9038803469518cc39919eb90be1 499 PANTHER PTHR11101:SF59 2 499 0.0 T 22-04-2016 LK04_RS00340 6aeae9038803469518cc39919eb90be1 499 PANTHER PTHR11101 2 499 0.0 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 LK04_RS00340 6aeae9038803469518cc39919eb90be1 499 Pfam PF01384 Phosphate transporter family 30 488 2.3E-85 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 LK04_RS14470 2529230ea9a81c3e83ffd351dd4e1909 396 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 6 202 6.8E-12 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 LK04_RS14470 2529230ea9a81c3e83ffd351dd4e1909 396 Pfam PF00578 AhpC/TSA family 264 372 1.3E-11 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LK04_RS14470 2529230ea9a81c3e83ffd351dd4e1909 396 Gene3D G3DSA:3.40.30.10 252 394 3.6E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS14470 2529230ea9a81c3e83ffd351dd4e1909 396 SUPERFAMILY SSF52833 249 390 9.1E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS14470 2529230ea9a81c3e83ffd351dd4e1909 396 PANTHER PTHR13833:SF51 42 393 1.1E-35 T 22-04-2016 LK04_RS14470 2529230ea9a81c3e83ffd351dd4e1909 396 PANTHER PTHR13833 42 393 1.1E-35 T 22-04-2016 LK04_RS17280 a5fddad4df9a148f916ceecf1af4022e 118 SUPERFAMILY SSF142906 1 103 4.05E-28 T 22-04-2016 LK04_RS17280 a5fddad4df9a148f916ceecf1af4022e 118 Pfam PF04237 YjbR 12 101 1.4E-15 T 22-04-2016 IPR007351 Uncharacterised protein YjbR LK04_RS17280 a5fddad4df9a148f916ceecf1af4022e 118 PANTHER PTHR35145 1 103 1.2E-28 T 22-04-2016 LK04_RS11185 b0f247c51f2e5623021c2adf2dd6dc6a 277 Gene3D G3DSA:3.30.1600.10 151 195 2.5E-26 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain LK04_RS11185 b0f247c51f2e5623021c2adf2dd6dc6a 277 Gene3D G3DSA:3.30.1600.10 59 98 2.5E-26 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain LK04_RS11185 b0f247c51f2e5623021c2adf2dd6dc6a 277 PANTHER PTHR11085:SF17 44 270 4.0E-80 T 22-04-2016 LK04_RS11185 b0f247c51f2e5623021c2adf2dd6dc6a 277 Pfam PF02146 Sir2 family 50 223 1.0E-49 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 LK04_RS11185 b0f247c51f2e5623021c2adf2dd6dc6a 277 SUPERFAMILY SSF52467 44 271 7.8E-74 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS11185 b0f247c51f2e5623021c2adf2dd6dc6a 277 PANTHER PTHR11085 44 270 4.0E-80 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 LK04_RS11185 b0f247c51f2e5623021c2adf2dd6dc6a 277 Gene3D G3DSA:3.40.50.1220 202 268 1.0E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS11185 b0f247c51f2e5623021c2adf2dd6dc6a 277 Gene3D G3DSA:3.40.50.1220 108 150 1.0E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS11185 b0f247c51f2e5623021c2adf2dd6dc6a 277 Gene3D G3DSA:3.40.50.1220 42 58 1.0E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS11185 b0f247c51f2e5623021c2adf2dd6dc6a 277 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 43 273 60.914 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 Pfam PF07687 Peptidase dimerisation domain 168 259 6.2E-9 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 PIRSF PIRSF005962 2 367 3.0E-87 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 Gene3D G3DSA:3.40.630.10 276 366 2.7E-66 T 22-04-2016 LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 Gene3D G3DSA:3.40.630.10 4 161 2.7E-66 T 22-04-2016 LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 Gene3D G3DSA:3.30.70.360 166 272 2.5E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 SUPERFAMILY SSF55031 167 278 6.41E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 8 354 1.5E-79 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 Pfam PF01546 Peptidase family M20/M25/M40 64 362 3.4E-22 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 SUPERFAMILY SSF53187 279 366 4.49E-61 T 22-04-2016 LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 SUPERFAMILY SSF53187 3 180 4.49E-61 T 22-04-2016 LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 PANTHER PTHR11014:SF118 11 366 4.3E-81 T 22-04-2016 LK04_RS02235 2db00bceefab6e2bfec79363b16b5ce4 367 PANTHER PTHR11014 11 366 4.3E-81 T 22-04-2016 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 3.0E-72 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 3.0E-72 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 3.0E-72 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 3.0E-72 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 3.0E-72 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 3.0E-72 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 3.0E-72 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 3.0E-72 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 3.0E-72 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 3.0E-72 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PIRSF PIRSF019574 1 369 2.5E-143 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 Gene3D G3DSA:3.40.190.10 43 149 2.5E-14 T 22-04-2016 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 SUPERFAMILY SSF53850 28 368 3.26E-105 T 22-04-2016 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 Pfam PF13416 Bacterial extracellular solute-binding protein 46 333 2.5E-35 T 22-04-2016 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PANTHER PTHR30222:SF11 18 369 8.8E-174 T 22-04-2016 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 PANTHER PTHR30222 18 369 8.8E-174 T 22-04-2016 LK04_RS12270 35a674400668f98f88f8866c320431cc 369 Gene3D G3DSA:3.40.190.10 150 318 2.8E-75 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 Pfam PF07687 Peptidase dimerisation domain 232 314 1.2E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS17065 76795079124219bb5973525c00133754 437 SUPERFAMILY SSF53187 341 429 5.97E-62 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 SUPERFAMILY SSF53187 2 54 5.97E-62 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 SUPERFAMILY SSF53187 94 242 5.97E-62 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 PANTHER PTHR30575:SF3 93 123 2.6E-84 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 PANTHER PTHR30575:SF3 1 53 2.6E-84 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 PANTHER PTHR30575:SF3 145 423 2.6E-84 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 419 3.6E-110 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LK04_RS17065 76795079124219bb5973525c00133754 437 SUPERFAMILY SSF55031 227 336 1.16E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS17065 76795079124219bb5973525c00133754 437 PIRSF PIRSF005962 1 433 1.2E-115 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LK04_RS17065 76795079124219bb5973525c00133754 437 Pfam PF01546 Peptidase family M20/M25/M40 113 428 4.7E-27 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS17065 76795079124219bb5973525c00133754 437 Gene3D G3DSA:3.40.630.10 2 54 1.4E-72 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 Gene3D G3DSA:3.40.630.10 93 224 1.4E-72 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 Gene3D G3DSA:3.40.630.10 338 429 1.4E-72 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 PANTHER PTHR30575 93 123 2.6E-84 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 PANTHER PTHR30575 1 53 2.6E-84 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 PANTHER PTHR30575 145 423 2.6E-84 T 22-04-2016 LK04_RS17065 76795079124219bb5973525c00133754 437 Gene3D G3DSA:3.30.70.360 229 335 2.8E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 PANTHER PTHR24220:SF308 8 382 7.5E-132 T 22-04-2016 LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 Gene3D G3DSA:3.40.50.300 6 239 2.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 Gene3D G3DSA:3.40.50.300 268 491 8.1E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 SUPERFAMILY SSF52540 7 232 8.71E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 Pfam PF00005 ABC transporter 22 173 2.0E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 Pfam PF00005 ABC transporter 273 427 7.3E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 SMART SM00382 282 478 1.7E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 SMART SM00382 31 221 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 SUPERFAMILY SSF52540 269 485 4.87E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14595 36f141b1564e762cdb8ab84a9311f2c0 501 PANTHER PTHR24220 8 382 7.5E-132 T 22-04-2016 LK04_RS02785 046ae90573e4e5878d75c4442fc300a4 484 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 75 478 8.3E-91 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LK04_RS02785 046ae90573e4e5878d75c4442fc300a4 484 Pfam PF02321 Outer membrane efflux protein 78 258 5.7E-30 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS02785 046ae90573e4e5878d75c4442fc300a4 484 Pfam PF02321 Outer membrane efflux protein 287 463 5.8E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS02785 046ae90573e4e5878d75c4442fc300a4 484 PANTHER PTHR30026:SF3 23 483 3.8E-80 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LK04_RS02785 046ae90573e4e5878d75c4442fc300a4 484 SUPERFAMILY SSF56954 50 465 9.29E-65 T 22-04-2016 LK04_RS02785 046ae90573e4e5878d75c4442fc300a4 484 PANTHER PTHR30026 23 483 3.8E-80 T 22-04-2016 LK04_RS02785 046ae90573e4e5878d75c4442fc300a4 484 Gene3D G3DSA:1.20.1600.10 75 464 5.5E-53 T 22-04-2016 LK04_RS12520 c6e6c858c68a15c0e1a66b37cbc25f26 239 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 221 1.6E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12520 c6e6c858c68a15c0e1a66b37cbc25f26 239 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 122 1.8E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS12520 c6e6c858c68a15c0e1a66b37cbc25f26 239 SUPERFAMILY SSF161098 15 216 1.44E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12520 c6e6c858c68a15c0e1a66b37cbc25f26 239 Gene3D G3DSA:1.10.3720.10 16 227 2.9E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12520 c6e6c858c68a15c0e1a66b37cbc25f26 239 PANTHER PTHR30133 8 236 1.8E-73 T 22-04-2016 LK04_RS04355 be27ebed9ee1ebea7b343e17348dd263 487 SUPERFAMILY SSF48452 312 453 3.48E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS04355 be27ebed9ee1ebea7b343e17348dd263 487 Gene3D G3DSA:3.30.2010.10 68 150 1.6E-16 T 22-04-2016 LK04_RS04355 be27ebed9ee1ebea7b343e17348dd263 487 Pfam PF14559 Tetratricopeptide repeat 356 418 3.4E-9 T 22-04-2016 LK04_RS04355 be27ebed9ee1ebea7b343e17348dd263 487 Gene3D G3DSA:1.25.40.10 306 456 1.5E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS04355 be27ebed9ee1ebea7b343e17348dd263 487 PANTHER PTHR22726 1 351 9.7E-133 T 22-04-2016 LK04_RS04355 be27ebed9ee1ebea7b343e17348dd263 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 8 482 31.465 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 LK04_RS04355 be27ebed9ee1ebea7b343e17348dd263 487 PANTHER PTHR22726:SF10 1 351 9.7E-133 T 22-04-2016 LK04_RS04355 be27ebed9ee1ebea7b343e17348dd263 487 Pfam PF01435 Peptidase family M48 71 259 4.8E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LK04_RS00870 83bce363abeb9e63604ae33c7c37b10f 208 PANTHER PTHR11229 1 207 1.6E-120 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00870 83bce363abeb9e63604ae33c7c37b10f 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 203 3.7E-91 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00870 83bce363abeb9e63604ae33c7c37b10f 208 SUPERFAMILY SSF50447 1 207 1.5E-80 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS00870 83bce363abeb9e63604ae33c7c37b10f 208 Pfam PF00297 Ribosomal protein L3 98 181 9.8E-15 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00870 83bce363abeb9e63604ae33c7c37b10f 208 Gene3D G3DSA:2.40.30.10 157 206 3.1E-8 T 22-04-2016 LK04_RS00870 83bce363abeb9e63604ae33c7c37b10f 208 Gene3D G3DSA:2.40.30.10 3 32 3.1E-8 T 22-04-2016 LK04_RS00870 83bce363abeb9e63604ae33c7c37b10f 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site LK04_RS00870 83bce363abeb9e63604ae33c7c37b10f 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 206 40.706 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00870 83bce363abeb9e63604ae33c7c37b10f 208 Gene3D G3DSA:4.10.960.10 77 156 3.0E-33 T 22-04-2016 LK04_RS18865 f99ac87a047cdffe44d617db523d8dc1 425 Pfam PF02655 ATP-grasp domain 111 295 8.5E-16 T 22-04-2016 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 LK04_RS18865 f99ac87a047cdffe44d617db523d8dc1 425 SUPERFAMILY SSF56059 126 329 1.24E-29 T 22-04-2016 LK04_RS18865 f99ac87a047cdffe44d617db523d8dc1 425 Gene3D G3DSA:3.30.470.20 198 332 3.5E-14 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS18865 f99ac87a047cdffe44d617db523d8dc1 425 Gene3D G3DSA:3.30.1490.20 127 197 1.1E-12 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS14190 6dd2fd215031c3db036656cc7076e758 308 Gene3D G3DSA:3.40.190.10 120 251 3.1E-31 T 22-04-2016 LK04_RS14190 6dd2fd215031c3db036656cc7076e758 308 Gene3D G3DSA:3.40.190.10 25 119 3.0E-12 T 22-04-2016 LK04_RS14190 6dd2fd215031c3db036656cc7076e758 308 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 19 293 1.6E-64 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 LK04_RS14190 6dd2fd215031c3db036656cc7076e758 308 PANTHER PTHR30570 22 306 1.0E-115 T 22-04-2016 LK04_RS14190 6dd2fd215031c3db036656cc7076e758 308 PANTHER PTHR30570:SF5 22 306 1.0E-115 T 22-04-2016 LK04_RS14190 6dd2fd215031c3db036656cc7076e758 308 SUPERFAMILY SSF53850 21 305 2.54E-68 T 22-04-2016 LK04_RS14190 6dd2fd215031c3db036656cc7076e758 308 Pfam PF12849 PBP superfamily domain 25 277 6.4E-28 T 22-04-2016 IPR024370 PBP domain LK04_RS04455 d445830caa3521903f4140665a829ebc 375 SUPERFAMILY SSF55031 179 288 7.03E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS04455 d445830caa3521903f4140665a829ebc 375 Gene3D G3DSA:3.30.70.360 188 288 1.1E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS04455 d445830caa3521903f4140665a829ebc 375 PANTHER PTHR11014:SF106 4 374 3.9E-98 T 22-04-2016 LK04_RS04455 d445830caa3521903f4140665a829ebc 375 Gene3D G3DSA:3.40.630.10 5 187 4.1E-74 T 22-04-2016 LK04_RS04455 d445830caa3521903f4140665a829ebc 375 Gene3D G3DSA:3.40.630.10 316 374 4.1E-74 T 22-04-2016 LK04_RS04455 d445830caa3521903f4140665a829ebc 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 4.5E-43 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS04455 d445830caa3521903f4140665a829ebc 375 PANTHER PTHR11014 4 374 3.9E-98 T 22-04-2016 LK04_RS04455 d445830caa3521903f4140665a829ebc 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LK04_RS04455 d445830caa3521903f4140665a829ebc 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LK04_RS04455 d445830caa3521903f4140665a829ebc 375 SUPERFAMILY SSF53187 292 373 3.28E-64 T 22-04-2016 LK04_RS04455 d445830caa3521903f4140665a829ebc 375 SUPERFAMILY SSF53187 5 178 3.28E-64 T 22-04-2016 LK04_RS04455 d445830caa3521903f4140665a829ebc 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.622 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 LK04_RS04455 d445830caa3521903f4140665a829ebc 375 Pfam PF07687 Peptidase dimerisation domain 175 282 4.2E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS04455 d445830caa3521903f4140665a829ebc 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 3.1E-176 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 2.1E-66 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 9.2E-37 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PIRSF PIRSF000350 1 447 7.5E-85 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 Gene3D G3DSA:3.50.50.60 149 247 2.1E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 Gene3D G3DSA:3.30.390.30 338 450 2.0E-46 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.0E-67 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 3.0E-67 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 3.0E-67 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.0E-67 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 3.0E-67 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 3.0E-67 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 3.0E-67 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 3.0E-67 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 3.0E-67 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 Gene3D G3DSA:3.50.50.60 2 148 3.0E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 Gene3D G3DSA:3.50.50.60 248 333 3.8E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 SUPERFAMILY SSF55424 336 450 2.92E-37 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PANTHER PTHR22912 1 450 3.0E-254 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 1.2E-217 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.1E-27 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.1E-27 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.1E-27 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.1E-27 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.1E-27 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 PANTHER PTHR22912:SF106 1 450 3.0E-254 T 22-04-2016 LK04_RS00300 7c320de262da458e6c37e2c31606a7a8 450 SUPERFAMILY SSF51905 1 365 2.88E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 ProSitePatterns PS01244 Aconitase family signature 2. 495 508 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PANTHER PTHR11670 7 393 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PANTHER PTHR11670 418 652 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PANTHER PTHR11670 668 713 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PANTHER PTHR11670 752 893 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 Gene3D G3DSA:3.30.499.10 22 249 1.4E-79 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 Gene3D G3DSA:3.40.1060.10 250 367 1.6E-36 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 ProSitePatterns PS00450 Aconitase family signature 1. 429 445 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 SUPERFAMILY SSF53732 10 628 7.19E-221 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 Pfam PF00330 Aconitase family (aconitate hydratase) 69 564 2.9E-183 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 892 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PANTHER PTHR11670:SF1 7 393 0.0 T 22-04-2016 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PANTHER PTHR11670:SF1 418 652 0.0 T 22-04-2016 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PANTHER PTHR11670:SF1 668 713 0.0 T 22-04-2016 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PANTHER PTHR11670:SF1 752 893 0.0 T 22-04-2016 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PRINTS PR00415 Aconitase family signature 203 216 8.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PRINTS PR00415 Aconitase family signature 217 232 8.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PRINTS PR00415 Aconitase family signature 279 292 8.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PRINTS PR00415 Aconitase family signature 495 508 8.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PRINTS PR00415 Aconitase family signature 293 306 8.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PRINTS PR00415 Aconitase family signature 146 159 8.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PRINTS PR00415 Aconitase family signature 170 178 8.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PRINTS PR00415 Aconitase family signature 433 444 8.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 PRINTS PR00415 Aconitase family signature 372 386 8.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 Gene3D G3DSA:3.30.499.10 369 577 7.9E-60 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 SUPERFAMILY SSF52016 632 892 1.88E-89 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 Pfam PF00694 Aconitase C-terminal domain 693 820 9.6E-49 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS08260 dae52f3a9dc53ce067f97585cc023f61 893 Gene3D G3DSA:3.20.19.10 639 891 1.3E-81 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LK04_RS03435 a10d662203439de0ac27c5b8744d964b 199 PANTHER PTHR10286:SF0 35 197 3.1E-49 T 22-04-2016 LK04_RS03435 a10d662203439de0ac27c5b8744d964b 199 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 87 93 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS03435 a10d662203439de0ac27c5b8744d964b 199 Pfam PF00719 Inorganic pyrophosphatase 40 196 9.5E-46 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS03435 a10d662203439de0ac27c5b8744d964b 199 SUPERFAMILY SSF50324 30 196 3.4E-54 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS03435 a10d662203439de0ac27c5b8744d964b 199 PANTHER PTHR10286 35 197 3.1E-49 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS03435 a10d662203439de0ac27c5b8744d964b 199 Gene3D G3DSA:3.90.80.10 29 197 1.2E-51 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS03435 a10d662203439de0ac27c5b8744d964b 199 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 36 196 30.737 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS08010 4dba920d52610dc279ce1dca63a79a23 183 PIRSF PIRSF000232 1 183 4.7E-66 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- LK04_RS08010 4dba920d52610dc279ce1dca63a79a23 183 Gene3D G3DSA:3.40.109.10 1 175 1.1E-41 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 LK04_RS08010 4dba920d52610dc279ce1dca63a79a23 183 Pfam PF00881 Nitroreductase family 9 161 1.6E-24 T 22-04-2016 IPR029479 Nitroreductase LK04_RS08010 4dba920d52610dc279ce1dca63a79a23 183 PANTHER PTHR23026 1 168 1.1E-87 T 22-04-2016 LK04_RS08010 4dba920d52610dc279ce1dca63a79a23 183 SUPERFAMILY SSF55469 1 182 8.25E-41 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 LK04_RS08010 4dba920d52610dc279ce1dca63a79a23 183 PANTHER PTHR23026:SF107 1 168 1.1E-87 T 22-04-2016 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 Gene3D G3DSA:1.10.10.60 2 57 5.7E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 SUPERFAMILY SSF46689 5 55 5.99E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 Pfam PF12833 Helix-turn-helix domain 27 105 5.5E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 PANTHER PTHR11019:SF133 2 112 2.8E-55 T 22-04-2016 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 SUPERFAMILY SSF46689 57 111 2.96E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 SMART SM00342 21 104 2.5E-33 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 Gene3D G3DSA:1.10.10.60 58 117 4.2E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 PANTHER PTHR11019 2 112 2.8E-55 T 22-04-2016 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.4E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS17225 cc651c5e58c72298bdb06d1e611c2a8a 142 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.4E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS17085 c1a0cd9275c5d1ecb0c93bc820a3daa7 355 SMART SM00530 5 60 5.6E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS17085 c1a0cd9275c5d1ecb0c93bc820a3daa7 355 Gene3D G3DSA:1.10.260.40 2 75 1.4E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS17085 c1a0cd9275c5d1ecb0c93bc820a3daa7 355 PANTHER PTHR10245 1 233 2.5E-23 T 22-04-2016 LK04_RS17085 c1a0cd9275c5d1ecb0c93bc820a3daa7 355 Pfam PF06114 Domain of unknown function (DUF955) 155 269 1.1E-14 T 22-04-2016 IPR010359 HTH domain, IrrE-type LK04_RS17085 c1a0cd9275c5d1ecb0c93bc820a3daa7 355 PANTHER PTHR10245:SF22 1 233 2.5E-23 T 22-04-2016 LK04_RS17085 c1a0cd9275c5d1ecb0c93bc820a3daa7 355 SUPERFAMILY SSF47413 2 64 2.36E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS17085 c1a0cd9275c5d1ecb0c93bc820a3daa7 355 Pfam PF12844 Helix-turn-helix domain 3 62 1.3E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS11585 82e4ec18084c08c8cbb9e2296e140c51 564 Gene3D G3DSA:3.90.550.10 10 132 1.8E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS11585 82e4ec18084c08c8cbb9e2296e140c51 564 Pfam PF00535 Glycosyl transferase family 2 9 123 9.3E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS11585 82e4ec18084c08c8cbb9e2296e140c51 564 PANTHER PTHR10859 9 250 4.1E-79 T 22-04-2016 LK04_RS11585 82e4ec18084c08c8cbb9e2296e140c51 564 PANTHER PTHR10859:SF84 9 250 4.1E-79 T 22-04-2016 LK04_RS11585 82e4ec18084c08c8cbb9e2296e140c51 564 SUPERFAMILY SSF53448 9 240 1.21E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS02110 a3629c9a2c51f52a19ee7814a27c628a 248 PANTHER PTHR30572 4 227 6.0E-77 T 22-04-2016 LK04_RS02110 a3629c9a2c51f52a19ee7814a27c628a 248 PANTHER PTHR30572:SF11 4 227 6.0E-77 T 22-04-2016 LK04_RS02110 a3629c9a2c51f52a19ee7814a27c628a 248 Pfam PF01618 MotA/TolQ/ExbB proton channel family 97 206 1.3E-34 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LK04_RS02110 a3629c9a2c51f52a19ee7814a27c628a 248 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 12 223 2.2E-96 T 22-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 LK04_RS06370 5612bb0615c08993c767c4c016cb4050 447 PIRSF PIRSF002808 12 444 1.8E-37 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS06370 5612bb0615c08993c767c4c016cb4050 447 PANTHER PTHR11662:SF277 11 445 3.1E-112 T 22-04-2016 LK04_RS06370 5612bb0615c08993c767c4c016cb4050 447 Gene3D G3DSA:1.20.1250.20 249 437 2.5E-25 T 22-04-2016 LK04_RS06370 5612bb0615c08993c767c4c016cb4050 447 SUPERFAMILY SSF103473 21 444 1.96E-86 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS06370 5612bb0615c08993c767c4c016cb4050 447 Gene3D G3DSA:1.20.1250.20 27 224 3.7E-48 T 22-04-2016 LK04_RS06370 5612bb0615c08993c767c4c016cb4050 447 PANTHER PTHR11662 11 445 3.1E-112 T 22-04-2016 LK04_RS06370 5612bb0615c08993c767c4c016cb4050 447 Pfam PF07690 Major Facilitator Superfamily 39 406 1.8E-61 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 Gene3D G3DSA:3.90.1600.10 402 433 6.2E-10 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 Gene3D G3DSA:3.90.1600.10 514 561 6.2E-10 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 SMART SM00486 150 557 3.6E-66 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 543 551 7.1E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 491 503 7.1E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 7.1E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 Gene3D G3DSA:3.30.420.10 150 366 3.8E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 PANTHER PTHR10322 72 786 1.3E-196 T 22-04-2016 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 165 6.0E-5 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 ProSitePatterns PS00116 DNA polymerase family B signature. 545 553 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 SUPERFAMILY SSF56672 387 780 4.34E-111 T 22-04-2016 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 Pfam PF00136 DNA polymerase family B 382 739 3.8E-40 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15520 e7bc9694bf9e1d5d780a8ed2238b5881 786 SUPERFAMILY SSF53098 6 391 2.46E-89 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS08450 dd070529273a36a1da960e5f5e9a7b47 327 SUPERFAMILY SSF143865 11 258 1.44E-48 T 22-04-2016 LK04_RS08450 dd070529273a36a1da960e5f5e9a7b47 327 Gene3D G3DSA:1.20.58.340 254 327 4.7E-21 T 22-04-2016 LK04_RS08450 dd070529273a36a1da960e5f5e9a7b47 327 Gene3D G3DSA:1.20.58.340 147 241 1.8E-16 T 22-04-2016 LK04_RS08450 dd070529273a36a1da960e5f5e9a7b47 327 SUPERFAMILY SSF144083 263 325 3.79E-15 T 22-04-2016 LK04_RS08450 dd070529273a36a1da960e5f5e9a7b47 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 1.2E-64 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 LK04_RS08450 dd070529273a36a1da960e5f5e9a7b47 327 PANTHER PTHR21535 20 327 5.7E-48 T 22-04-2016 LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 304 1.6E-15 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 Gene3D G3DSA:1.10.260.40 1 62 1.9E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 SUPERFAMILY SSF47413 2 58 8.19E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 SUPERFAMILY SSF53822 60 314 1.54E-40 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 SMART SM00354 1 73 2.8E-30 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.1E-145 T 22-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 PANTHER PTHR30146 1 334 2.7E-216 T 22-04-2016 LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 3.3E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 Gene3D G3DSA:3.40.50.2300 63 152 3.8E-28 T 22-04-2016 LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 Gene3D G3DSA:3.40.50.2300 156 329 8.5E-35 T 22-04-2016 LK04_RS15455 6ac0cc5c80bb3f1b73595680c8cf9814 336 PANTHER PTHR30146:SF25 1 334 2.7E-216 T 22-04-2016 LK04_RS11445 e8021b6e99aaa57cd5caaebf4588c8e2 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 LK04_RS11445 e8021b6e99aaa57cd5caaebf4588c8e2 215 Gene3D G3DSA:3.40.30.10 8 83 3.5E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS11445 e8021b6e99aaa57cd5caaebf4588c8e2 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 214 1.6E-49 T 22-04-2016 IPR007494 Glutaredoxin 2, C-terminal LK04_RS11445 e8021b6e99aaa57cd5caaebf4588c8e2 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 8.6E-92 T 22-04-2016 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 LK04_RS11445 e8021b6e99aaa57cd5caaebf4588c8e2 215 SUPERFAMILY SSF52833 1 77 8.47E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS11445 e8021b6e99aaa57cd5caaebf4588c8e2 215 PANTHER PTHR11260:SF237 1 213 2.5E-90 T 22-04-2016 LK04_RS11445 e8021b6e99aaa57cd5caaebf4588c8e2 215 PANTHER PTHR11260 1 213 2.5E-90 T 22-04-2016 LK04_RS11445 e8021b6e99aaa57cd5caaebf4588c8e2 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 6.3E-10 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS11445 e8021b6e99aaa57cd5caaebf4588c8e2 215 SUPERFAMILY SSF47616 76 214 1.43E-45 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS11445 e8021b6e99aaa57cd5caaebf4588c8e2 215 Gene3D G3DSA:1.20.1050.10 91 214 7.2E-48 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS07440 8180f9f094e729c76ec33f31b45729d1 442 Gene3D G3DSA:3.10.350.10 100 141 4.4E-5 T 22-04-2016 IPR018392 LysM domain LK04_RS07440 8180f9f094e729c76ec33f31b45729d1 442 Pfam PF01551 Peptidase family M23 315 409 2.0E-34 T 22-04-2016 IPR016047 Peptidase M23 LK04_RS07440 8180f9f094e729c76ec33f31b45729d1 442 SUPERFAMILY SSF51261 167 410 7.85E-71 T 22-04-2016 IPR011055 Duplicated hybrid motif LK04_RS07440 8180f9f094e729c76ec33f31b45729d1 442 PANTHER PTHR21666:SF207 1 432 3.3E-226 T 22-04-2016 LK04_RS07440 8180f9f094e729c76ec33f31b45729d1 442 PANTHER PTHR21666 1 432 3.3E-226 T 22-04-2016 LK04_RS07440 8180f9f094e729c76ec33f31b45729d1 442 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 4.6E-8 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal LK04_RS07440 8180f9f094e729c76ec33f31b45729d1 442 Pfam PF04225 Opacity-associated protein A LysM-like domain 97 177 5.3E-9 T 22-04-2016 IPR007340 Opacity-associated protein A LK04_RS07440 8180f9f094e729c76ec33f31b45729d1 442 SMART SM00257 99 144 6.6E-4 T 22-04-2016 IPR018392 LysM domain LK04_RS07440 8180f9f094e729c76ec33f31b45729d1 442 Gene3D G3DSA:2.70.70.10 269 411 2.3E-50 T 22-04-2016 LK04_RS18045 4a3920863768a915895e3f2d54391263 350 PIRSF PIRSF038991 2 350 6.5E-85 T 22-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 LK04_RS18045 4a3920863768a915895e3f2d54391263 350 PANTHER PTHR38457:SF1 1 350 7.2E-71 T 22-04-2016 LK04_RS18045 4a3920863768a915895e3f2d54391263 350 PANTHER PTHR38457 1 350 7.2E-71 T 22-04-2016 LK04_RS18045 4a3920863768a915895e3f2d54391263 350 Pfam PF05145 Putative ammonia monooxygenase 33 341 1.4E-98 T 22-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 LK04_RS18045 4a3920863768a915895e3f2d54391263 350 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 185 341 1.7E-43 T 22-04-2016 IPR017516 AbrB duplication LK04_RS18045 4a3920863768a915895e3f2d54391263 350 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 10 164 4.0E-43 T 22-04-2016 IPR017516 AbrB duplication LK04_RS05980 6e10b7653c8e16056d40f7f643c09a58 235 Pfam PF00072 Response regulator receiver domain 10 118 7.2E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS05980 6e10b7653c8e16056d40f7f643c09a58 235 SMART SM00448 8 118 5.9E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS05980 6e10b7653c8e16056d40f7f643c09a58 235 PANTHER PTHR26402 8 231 3.0E-125 T 22-04-2016 LK04_RS05980 6e10b7653c8e16056d40f7f643c09a58 235 PANTHER PTHR26402:SF530 8 231 3.0E-125 T 22-04-2016 LK04_RS05980 6e10b7653c8e16056d40f7f643c09a58 235 Gene3D G3DSA:1.10.10.10 135 230 3.5E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05980 6e10b7653c8e16056d40f7f643c09a58 235 SMART SM00862 151 227 2.0E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS05980 6e10b7653c8e16056d40f7f643c09a58 235 Gene3D G3DSA:3.40.50.2300 5 130 1.5E-39 T 22-04-2016 LK04_RS05980 6e10b7653c8e16056d40f7f643c09a58 235 SUPERFAMILY SSF52172 7 185 7.97E-42 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS05980 6e10b7653c8e16056d40f7f643c09a58 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 6.4E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS19430 c21b7e444d96abc49ccb51538f13308d 343 PANTHER PTHR30160 1 308 1.9E-42 T 22-04-2016 LK04_RS19430 c21b7e444d96abc49ccb51538f13308d 343 Gene3D G3DSA:3.40.50.2000 2 151 1.0E-26 T 22-04-2016 LK04_RS19430 c21b7e444d96abc49ccb51538f13308d 343 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 79 320 7.8E-22 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 LK04_RS19430 c21b7e444d96abc49ccb51538f13308d 343 PANTHER PTHR30160:SF1 1 308 1.9E-42 T 22-04-2016 LK04_RS19430 c21b7e444d96abc49ccb51538f13308d 343 SUPERFAMILY SSF53756 2 336 1.19E-59 T 22-04-2016 LK04_RS19430 c21b7e444d96abc49ccb51538f13308d 343 Gene3D G3DSA:3.40.50.2000 169 336 1.4E-29 T 22-04-2016 LK04_RS07295 c10e5022b279411f698333ae5e22298f 406 SMART SM01012 343 398 5.1E-20 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 LK04_RS07295 c10e5022b279411f698333ae5e22298f 406 SUPERFAMILY SSF52172 324 398 1.04E-14 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS07295 c10e5022b279411f698333ae5e22298f 406 Pfam PF08376 Nitrate and nitrite sensing 34 265 3.7E-46 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein LK04_RS07295 c10e5022b279411f698333ae5e22298f 406 Pfam PF03861 ANTAR domain 346 398 5.6E-17 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 LK04_RS07295 c10e5022b279411f698333ae5e22298f 406 Gene3D G3DSA:1.10.10.10 346 404 2.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01905 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LK04_RS01905 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LK04_RS01905 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01905 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LK04_RS01905 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LK04_RS01905 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LK04_RS01905 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LK04_RS01905 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LK04_RS01905 e0f63aa874b218a4c9d359851efe3e90 71 PANTHER PTHR21109 1 71 2.6E-27 T 22-04-2016 LK04_RS01905 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LK04_RS05765 337e273f8320225ef5cb1f875e16d04d 312 Pfam PF00294 pfkB family carbohydrate kinase 14 292 5.3E-64 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS05765 337e273f8320225ef5cb1f875e16d04d 312 Gene3D G3DSA:3.40.1190.20 37 310 4.5E-82 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS05765 337e273f8320225ef5cb1f875e16d04d 312 PANTHER PTHR10584 1 308 1.9E-124 T 22-04-2016 LK04_RS05765 337e273f8320225ef5cb1f875e16d04d 312 PIRSF PIRSF000535 2 311 5.5E-115 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LK04_RS05765 337e273f8320225ef5cb1f875e16d04d 312 PANTHER PTHR10584:SF170 1 308 1.9E-124 T 22-04-2016 LK04_RS05765 337e273f8320225ef5cb1f875e16d04d 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LK04_RS05765 337e273f8320225ef5cb1f875e16d04d 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.1E-101 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 LK04_RS05765 337e273f8320225ef5cb1f875e16d04d 312 SUPERFAMILY SSF53613 7 291 2.18E-66 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS05765 337e273f8320225ef5cb1f875e16d04d 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LK04_RS05765 337e273f8320225ef5cb1f875e16d04d 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 5.7E-99 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LK04_RS10265 5c85dc0b0392848f4f76702de3633987 135 Gene3D G3DSA:3.10.180.10 1 127 4.1E-46 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS10265 5c85dc0b0392848f4f76702de3633987 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 133 3.3E-67 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 LK04_RS10265 5c85dc0b0392848f4f76702de3633987 135 PANTHER PTHR10374 1 127 2.7E-58 T 22-04-2016 LK04_RS10265 5c85dc0b0392848f4f76702de3633987 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 LK04_RS10265 5c85dc0b0392848f4f76702de3633987 135 SUPERFAMILY SSF54593 1 128 1.3E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS10265 5c85dc0b0392848f4f76702de3633987 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.8E-24 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LK04_RS10265 5c85dc0b0392848f4f76702de3633987 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 SUPERFAMILY SSF51735 2 113 1.05E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 Gene3D G3DSA:1.10.8.210 149 211 1.9E-23 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 Gene3D G3DSA:3.30.160.110 113 148 1.7E-19 T 22-04-2016 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 SUPERFAMILY SSF53790 213 456 3.01E-78 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 PIRSF PIRSF036426 1 465 8.0E-205 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 52.318 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 5.4E-90 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 7.2E-81 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 4.1E-48 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 4.0E-21 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 PANTHER PTHR21091:SF16 1 19 2.6E-74 T 22-04-2016 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 SUPERFAMILY SSF75615 114 212 1.06E-29 T 22-04-2016 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 Gene3D G3DSA:3.30.950.10 331 463 6.6E-47 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 Pfam PF13241 Putative NAD(P)-binding 6 115 1.2E-29 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 PANTHER PTHR21091:SF16 183 426 2.6E-74 T 22-04-2016 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 5.2E-8 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 PANTHER PTHR21091 1 19 2.6E-74 T 22-04-2016 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 Gene3D G3DSA:3.40.1010.10 214 330 9.0E-47 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 Gene3D G3DSA:3.40.50.720 2 112 2.9E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 PANTHER PTHR21091 183 426 2.6E-74 T 22-04-2016 LK04_RS03470 80ff777568abcf53d7140b7a74215cbd 471 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS01160 1849b91bbcd0b386a24aaf1f57893570 156 Gene3D G3DSA:2.40.50.100 80 156 3.8E-33 T 22-04-2016 LK04_RS01160 1849b91bbcd0b386a24aaf1f57893570 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 1.3E-68 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LK04_RS01160 1849b91bbcd0b386a24aaf1f57893570 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 1.3E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LK04_RS01160 1849b91bbcd0b386a24aaf1f57893570 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 1.3E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LK04_RS01160 1849b91bbcd0b386a24aaf1f57893570 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 1.3E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LK04_RS01160 1849b91bbcd0b386a24aaf1f57893570 156 Pfam PF00364 Biotin-requiring enzyme 83 155 5.2E-26 T 22-04-2016 IPR000089 Biotin/lipoyl attachment LK04_RS01160 1849b91bbcd0b386a24aaf1f57893570 156 PANTHER PTHR23151 1 156 1.2E-51 T 22-04-2016 LK04_RS01160 1849b91bbcd0b386a24aaf1f57893570 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 22-04-2016 IPR001882 Biotin-binding site LK04_RS01160 1849b91bbcd0b386a24aaf1f57893570 156 SUPERFAMILY SSF51230 81 156 1.44E-26 T 22-04-2016 IPR011053 Single hybrid motif LK04_RS03810 df1c88c20943d4a01a5899459b104602 319 Gene3D G3DSA:1.10.620.20 6 280 2.6E-90 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 LK04_RS03810 df1c88c20943d4a01a5899459b104602 319 PIRSF PIRSF000355 1 316 5.7E-79 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LK04_RS03810 df1c88c20943d4a01a5899459b104602 319 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 7 319 4.1E-144 T 22-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS03810 df1c88c20943d4a01a5899459b104602 319 Pfam PF00268 Ribonucleotide reductase, small chain 9 280 5.3E-84 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LK04_RS03810 df1c88c20943d4a01a5899459b104602 319 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 97 113 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS03810 df1c88c20943d4a01a5899459b104602 319 PANTHER PTHR23409 1 319 1.0E-108 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LK04_RS03810 df1c88c20943d4a01a5899459b104602 319 SUPERFAMILY SSF47240 7 319 2.58E-102 T 22-04-2016 IPR009078 Ferritin-like superfamily LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 Gene3D G3DSA:3.40.190.10 94 179 3.0E-35 T 22-04-2016 LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 PANTHER PTHR30537:SF26 1 304 2.1E-159 T 22-04-2016 LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.6E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 SUPERFAMILY SSF53850 93 295 5.61E-40 T 22-04-2016 LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 PANTHER PTHR30537 1 304 2.1E-159 T 22-04-2016 LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 Gene3D G3DSA:3.40.190.10 180 258 1.4E-16 T 22-04-2016 LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 Pfam PF03466 LysR substrate binding domain 91 292 2.7E-40 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 Gene3D G3DSA:1.10.10.10 2 88 2.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS03310 840b2094cb635a002e120bf66cf584e0 305 SUPERFAMILY SSF46785 3 87 3.52E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 SUPERFAMILY SSF69075 317 417 5.36E-28 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 1.4E-158 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 2.2E-48 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 1.2E-47 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 SUPERFAMILY SSF69742 1 158 2.75E-45 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 PANTHER PTHR21089 272 359 1.7E-146 T 22-04-2016 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 PANTHER PTHR21089 18 256 1.7E-146 T 22-04-2016 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 SUPERFAMILY SSF51735 162 315 1.71E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 3.7E-24 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 Gene3D G3DSA:3.40.50.720 163 313 1.2E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 PANTHER PTHR21089:SF3 272 359 1.7E-146 T 22-04-2016 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 PANTHER PTHR21089:SF3 18 256 1.7E-146 T 22-04-2016 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 PIRSF PIRSF000445 1 418 7.6E-153 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LK04_RS07215 1c61cad48a5f453d885df25c6ec604f1 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.775 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 PANTHER PTHR11019 1 273 1.2E-140 T 22-04-2016 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 Pfam PF12833 Helix-turn-helix domain 192 270 5.8E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 265 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 Gene3D G3DSA:2.60.120.10 1 77 7.0E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 SUPERFAMILY SSF46689 170 220 2.87E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 SMART SM00342 186 269 5.1E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 Gene3D G3DSA:1.10.10.60 166 222 3.9E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 SUPERFAMILY SSF46689 222 272 1.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 269 5.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 253 5.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 SUPERFAMILY SSF51215 17 157 3.01E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 Gene3D G3DSA:1.10.10.60 223 271 1.5E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 Pfam PF02311 AraC-like ligand binding domain 18 148 2.6E-18 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS08665 4432c08b4ddd9c2afdb0428d498b55d4 273 PANTHER PTHR11019:SF86 1 273 1.2E-140 T 22-04-2016 LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 PANTHER PTHR11661 1 142 1.9E-74 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 SUPERFAMILY SSF46906 68 141 2.35E-26 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.0E-28 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 SUPERFAMILY SSF54747 3 73 1.7E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 SMART SM00649 9 141 5.6E-84 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.444 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 Gene3D G3DSA:3.30.1550.10 2 72 5.2E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 6.0E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 3.3E-65 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 Gene3D G3DSA:1.10.10.250 73 141 1.6E-31 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 22-04-2016 LK04_RS17795 e825fb48f4227a855f51053fb423c319 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 LK04_RS09175 43532853e905013f32f78deb8f837684 361 SUPERFAMILY SSF141571 146 318 8.63E-35 T 22-04-2016 LK04_RS09175 43532853e905013f32f78deb8f837684 361 PANTHER PTHR14136:SF0 38 311 2.6E-27 T 22-04-2016 LK04_RS09175 43532853e905013f32f78deb8f837684 361 Pfam PF13599 Pentapeptide repeats (9 copies) 249 318 1.0E-10 T 22-04-2016 IPR001646 Pentapeptide repeat LK04_RS09175 43532853e905013f32f78deb8f837684 361 Pfam PF13599 Pentapeptide repeats (9 copies) 169 244 1.1E-10 T 22-04-2016 IPR001646 Pentapeptide repeat LK04_RS09175 43532853e905013f32f78deb8f837684 361 Pfam PF13599 Pentapeptide repeats (9 copies) 26 94 1.6E-13 T 22-04-2016 IPR001646 Pentapeptide repeat LK04_RS09175 43532853e905013f32f78deb8f837684 361 SUPERFAMILY SSF141571 10 154 4.45E-26 T 22-04-2016 LK04_RS09175 43532853e905013f32f78deb8f837684 361 PANTHER PTHR14136 38 311 2.6E-27 T 22-04-2016 LK04_RS16330 a405c5332db97c29520afb6efecbe28b 95 Pfam PF01541 GIY-YIG catalytic domain 5 76 3.3E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LK04_RS16330 a405c5332db97c29520afb6efecbe28b 95 PANTHER PTHR34477:SF1 1 85 1.7E-33 T 22-04-2016 LK04_RS16330 a405c5332db97c29520afb6efecbe28b 95 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 2 94 29.126 T 22-04-2016 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease LK04_RS16330 a405c5332db97c29520afb6efecbe28b 95 SUPERFAMILY SSF82771 5 74 2.48E-10 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LK04_RS16330 a405c5332db97c29520afb6efecbe28b 95 PANTHER PTHR34477 1 85 1.7E-33 T 22-04-2016 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 SMART SM00871 126 288 5.0E-8 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 SMART SM00342 21 104 2.7E-29 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 Gene3D G3DSA:1.10.10.60 58 119 1.5E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 SUPERFAMILY SSF55136 124 288 4.45E-41 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 PANTHER PTHR11019 6 112 2.7E-63 T 22-04-2016 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 Pfam PF06445 GyrI-like small molecule binding domain 128 288 2.4E-16 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 Gene3D G3DSA:1.10.10.60 3 57 1.7E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 3.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 3.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 Pfam PF12833 Helix-turn-helix domain 28 105 6.2E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 SUPERFAMILY SSF46689 57 109 8.96E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 Gene3D G3DSA:3.20.80.10 124 290 1.8E-58 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 PANTHER PTHR11019:SF84 6 112 2.7E-63 T 22-04-2016 LK04_RS15835 50c9dcf5dc3b91f2b65897e8d586e76d 293 SUPERFAMILY SSF46689 6 55 8.96E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 PANTHER PTHR19211 1 573 9.6E-233 T 22-04-2016 LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 Pfam PF12848 ABC transporter 224 297 1.0E-8 T 22-04-2016 IPR032781 ABC-transporter extension domain LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 SMART SM00382 28 230 1.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 SMART SM00382 344 515 2.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 SUPERFAMILY SSF52540 309 501 1.21E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 PANTHER PTHR19211:SF45 1 573 9.6E-233 T 22-04-2016 LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 SUPERFAMILY SSF52540 126 239 1.49E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 SUPERFAMILY SSF52540 3 94 1.49E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 Pfam PF16326 ABC transporter C-terminal domain 563 632 8.4E-23 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 Pfam PF00005 ABC transporter 19 185 3.9E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 Pfam PF00005 ABC transporter 336 469 1.1E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 Gene3D G3DSA:3.40.50.300 318 553 8.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11900 9faa5167bb35daaa86ffb438b7409997 637 Gene3D G3DSA:3.40.50.300 2 270 1.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01385 762b48dff20ac048b04cbf981e0b2e80 542 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 289 443 5.9E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LK04_RS01385 762b48dff20ac048b04cbf981e0b2e80 542 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 402 421 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 LK04_RS01385 762b48dff20ac048b04cbf981e0b2e80 542 Gene3D G3DSA:2.40.110.10 181 280 1.8E-18 T 22-04-2016 LK04_RS01385 762b48dff20ac048b04cbf981e0b2e80 542 SUPERFAMILY SSF47203 294 446 1.13E-37 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LK04_RS01385 762b48dff20ac048b04cbf981e0b2e80 542 PANTHER PTHR10909:SF289 24 463 3.2E-211 T 22-04-2016 LK04_RS01385 762b48dff20ac048b04cbf981e0b2e80 542 PANTHER PTHR10909 24 463 3.2E-211 T 22-04-2016 LK04_RS01385 762b48dff20ac048b04cbf981e0b2e80 542 Gene3D G3DSA:1.20.140.10 281 445 2.4E-37 T 22-04-2016 LK04_RS01385 762b48dff20ac048b04cbf981e0b2e80 542 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 279 3.3E-13 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LK04_RS01385 762b48dff20ac048b04cbf981e0b2e80 542 SUPERFAMILY SSF56645 61 286 8.46E-29 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LK04_RS09310 b0da833ea17f33730152a73f166181cf 309 PANTHER PTHR30024 1 300 3.9E-79 T 22-04-2016 LK04_RS09310 b0da833ea17f33730152a73f166181cf 309 SMART SM00062 23 232 6.5E-8 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS09310 b0da833ea17f33730152a73f166181cf 309 SUPERFAMILY SSF53850 36 237 2.94E-41 T 22-04-2016 LK04_RS09310 b0da833ea17f33730152a73f166181cf 309 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 24 302 4.2E-52 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 LK04_RS09310 b0da833ea17f33730152a73f166181cf 309 Pfam PF09084 NMT1/THI5 like 62 234 2.2E-15 T 22-04-2016 IPR015168 SsuA/THI5-like LK04_RS09310 b0da833ea17f33730152a73f166181cf 309 Gene3D G3DSA:3.40.190.10 102 196 5.1E-24 T 22-04-2016 LK04_RS09310 b0da833ea17f33730152a73f166181cf 309 PANTHER PTHR30024:SF3 1 300 3.9E-79 T 22-04-2016 LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 5 785 0.0 T 22-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 SMART SM00564 708 741 11.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 SMART SM00564 329 371 0.026 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 SMART SM00564 273 304 390.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 SMART SM00564 399 451 2.8 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 SMART SM00564 207 239 3.0E-6 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 PANTHER PTHR32303:SF4 117 500 5.2E-144 T 22-04-2016 LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 PANTHER PTHR32303:SF4 570 785 5.2E-144 T 22-04-2016 LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 Pfam PF01011 PQQ enzyme repeat 717 750 1.9E-5 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 Pfam PF13360 PQQ-like domain 207 395 2.2E-14 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 SUPERFAMILY SSF50998 550 785 2.35E-134 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 SUPERFAMILY SSF50998 152 514 2.35E-134 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 PANTHER PTHR32303 117 500 5.2E-144 T 22-04-2016 LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 PANTHER PTHR32303 570 785 5.2E-144 T 22-04-2016 LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 Gene3D G3DSA:2.140.10.10 152 527 1.1E-140 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LK04_RS09305 97c0968cc7bf3b67e518100095b9ef2d 786 Gene3D G3DSA:2.140.10.10 562 785 1.1E-140 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LK04_RS14845 3b0ae3881d9bcf9b65da534a455d3665 217 SUPERFAMILY SSF161098 9 201 6.02E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14845 3b0ae3881d9bcf9b65da534a455d3665 217 PANTHER PTHR30450:SF1 1 217 8.0E-122 T 22-04-2016 LK04_RS14845 3b0ae3881d9bcf9b65da534a455d3665 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 215 3.8E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14845 3b0ae3881d9bcf9b65da534a455d3665 217 PANTHER PTHR30450 1 217 8.0E-122 T 22-04-2016 LK04_RS14845 3b0ae3881d9bcf9b65da534a455d3665 217 Gene3D G3DSA:1.10.3720.10 9 214 2.3E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14465 d9eef2307827269f7ddc637e57807c68 473 Gene3D G3DSA:3.40.309.10 258 435 1.0E-62 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS14465 d9eef2307827269f7ddc637e57807c68 473 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LK04_RS14465 d9eef2307827269f7ddc637e57807c68 473 PANTHER PTHR11699 7 473 1.6E-171 T 22-04-2016 LK04_RS14465 d9eef2307827269f7ddc637e57807c68 473 Pfam PF00171 Aldehyde dehydrogenase family 15 469 4.2E-145 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS14465 d9eef2307827269f7ddc637e57807c68 473 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LK04_RS14465 d9eef2307827269f7ddc637e57807c68 473 Gene3D G3DSA:3.40.605.10 7 257 3.7E-74 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS14465 d9eef2307827269f7ddc637e57807c68 473 SUPERFAMILY SSF53720 4 471 3.67E-144 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS09135 502384ccd910a84f629451ac0ed22711 234 Pfam PF02678 Pirin 39 106 1.3E-8 T 22-04-2016 IPR003829 Pirin, N-terminal domain LK04_RS09135 502384ccd910a84f629451ac0ed22711 234 Gene3D G3DSA:2.60.120.10 20 198 1.4E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS09135 502384ccd910a84f629451ac0ed22711 234 SUPERFAMILY SSF51182 10 197 6.85E-21 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS17360 14ec56e95f2ad159bfb3828d3d19602f 172 Pfam PF04345 Chorismate lyase 13 167 4.2E-34 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 LK04_RS17360 14ec56e95f2ad159bfb3828d3d19602f 172 Gene3D G3DSA:3.40.1410.10 8 166 1.8E-57 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LK04_RS17360 14ec56e95f2ad159bfb3828d3d19602f 172 SUPERFAMILY SSF64288 8 166 5.23E-48 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LK04_RS17360 14ec56e95f2ad159bfb3828d3d19602f 172 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 166 27.058 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 LK04_RS17360 14ec56e95f2ad159bfb3828d3d19602f 172 PANTHER PTHR38683 1 172 4.5E-62 T 22-04-2016 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PANTHER PTHR30128 1 356 1.6E-127 T 22-04-2016 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PRINTS PR01021 OMPA domain signature 233 255 1.2E-23 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PRINTS PR01021 OMPA domain signature 280 296 1.2E-23 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PRINTS PR01021 OMPA domain signature 265 280 1.2E-23 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PRINTS PR01022 Outer membrane protein A signature 188 202 8.1E-67 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PRINTS PR01022 Outer membrane protein A signature 323 336 8.1E-67 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PRINTS PR01022 Outer membrane protein A signature 174 188 8.1E-67 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PRINTS PR01022 Outer membrane protein A signature 221 236 8.1E-67 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PRINTS PR01022 Outer membrane protein A signature 250 269 8.1E-67 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PRINTS PR01022 Outer membrane protein A signature 289 308 8.1E-67 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PRINTS PR01022 Outer membrane protein A signature 112 128 8.1E-67 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 SUPERFAMILY SSF56925 22 203 4.71E-43 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 Pfam PF00691 OmpA family 232 328 6.4E-24 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 ProSitePatterns PS01068 OmpA-like domain. 267 311 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 SUPERFAMILY SSF103088 219 344 4.32E-35 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 Gene3D G3DSA:2.40.160.20 11 221 2.2E-82 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 Gene3D G3DSA:3.30.1330.60 222 344 1.7E-40 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 PANTHER PTHR30128:SF16 1 356 1.6E-127 T 22-04-2016 LK04_RS11865 f5b4cf2923f7bd5ca8ab47f9cb80e20b 356 Pfam PF01389 OmpA-like transmembrane domain 23 204 1.2E-72 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 LK04_RS19340 4661543a82378a5a37d72fd32bce8a58 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 7.7E-44 T 22-04-2016 IPR013527 YicC-like, N-terminal LK04_RS19340 4661543a82378a5a37d72fd32bce8a58 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.5E-34 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 LK04_RS19340 4661543a82378a5a37d72fd32bce8a58 287 PANTHER PTHR30636 1 287 9.4E-112 T 22-04-2016 LK04_RS19340 4661543a82378a5a37d72fd32bce8a58 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 9.4E-131 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 Gene3D G3DSA:3.40.50.300 286 387 6.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 Gene3D G3DSA:3.40.50.300 552 642 6.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 7.6E-75 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 8.1E-76 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 Gene3D G3DSA:3.40.50.300 4 110 3.6E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 Gene3D G3DSA:3.40.50.300 191 285 3.6E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 PANTHER PTHR11070 4 718 8.2E-258 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 22-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 Gene3D G3DSA:1.10.10.160 114 190 1.4E-24 T 22-04-2016 IPR013986 DExx box DNA helicase domain LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 SUPERFAMILY SSF52540 4 642 7.74E-182 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 PANTHER PTHR11070:SF7 4 718 8.2E-258 T 22-04-2016 LK04_RS18055 00768599594295d9f3a12d6c95ffa327 720 Gene3D G3DSA:1.10.486.10 388 541 7.7E-50 T 22-04-2016 LK04_RS09180 cdb918fed57afb91d433ab38b23ca721 202 Pfam PF12059 Protein of unknown function (DUF3540) 27 202 9.7E-53 T 22-04-2016 IPR021927 Protein of unknown function DUF3540 LK04_RS19370 8dd012c1cd5e323a258628981bd57b60 152 SUPERFAMILY SSF51283 1 151 1.96E-54 T 22-04-2016 IPR029054 dUTPase-like LK04_RS19370 8dd012c1cd5e323a258628981bd57b60 152 Pfam PF00692 dUTPase 17 150 9.7E-43 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 LK04_RS19370 8dd012c1cd5e323a258628981bd57b60 152 PANTHER PTHR11241 1 151 2.4E-54 T 22-04-2016 LK04_RS19370 8dd012c1cd5e323a258628981bd57b60 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.075 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 LK04_RS19370 8dd012c1cd5e323a258628981bd57b60 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 151 1.2E-48 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 LK04_RS19370 8dd012c1cd5e323a258628981bd57b60 152 Gene3D G3DSA:2.70.40.10 5 151 1.0E-52 T 22-04-2016 IPR029054 dUTPase-like LK04_RS16735 a13e09cc87263aeb0f831d925aa2f22b 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 3.7E-137 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase LK04_RS16735 a13e09cc87263aeb0f831d925aa2f22b 342 PIRSF PIRSF004911 3 342 5.9E-119 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase LK04_RS16735 a13e09cc87263aeb0f831d925aa2f22b 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 5.7E-158 T 22-04-2016 IPR022462 Lysine-2,3-aminomutase-like LK04_RS16735 a13e09cc87263aeb0f831d925aa2f22b 342 Gene3D G3DSA:3.20.20.70 105 317 1.6E-17 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS16735 a13e09cc87263aeb0f831d925aa2f22b 342 Pfam PF04055 Radical SAM superfamily 118 217 2.1E-7 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS16735 a13e09cc87263aeb0f831d925aa2f22b 342 Pfam PF13353 4Fe-4S single cluster domain 111 179 1.4E-6 T 22-04-2016 LK04_RS16735 a13e09cc87263aeb0f831d925aa2f22b 342 PANTHER PTHR30538 12 339 2.3E-141 T 22-04-2016 LK04_RS16735 a13e09cc87263aeb0f831d925aa2f22b 342 PANTHER PTHR30538:SF1 12 339 2.3E-141 T 22-04-2016 LK04_RS16735 a13e09cc87263aeb0f831d925aa2f22b 342 SUPERFAMILY SSF102114 102 324 9.81E-28 T 22-04-2016 LK04_RS03820 c02fecf9b8b10d8da19d8db09bfe7cad 134 Gene3D G3DSA:3.40.50.360 4 132 4.3E-56 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS03820 c02fecf9b8b10d8da19d8db09bfe7cad 134 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 6.9E-54 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI LK04_RS03820 c02fecf9b8b10d8da19d8db09bfe7cad 134 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 35.361 T 22-04-2016 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial LK04_RS03820 c02fecf9b8b10d8da19d8db09bfe7cad 134 PANTHER PTHR37297:SF1 1 134 3.5E-49 T 22-04-2016 LK04_RS03820 c02fecf9b8b10d8da19d8db09bfe7cad 134 PANTHER PTHR37297 1 134 3.5E-49 T 22-04-2016 LK04_RS03820 c02fecf9b8b10d8da19d8db09bfe7cad 134 Pfam PF07972 NrdI Flavodoxin like 5 122 2.7E-46 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI LK04_RS03820 c02fecf9b8b10d8da19d8db09bfe7cad 134 PIRSF PIRSF005087 1 134 2.7E-52 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI LK04_RS03820 c02fecf9b8b10d8da19d8db09bfe7cad 134 SUPERFAMILY SSF52218 4 131 1.17E-24 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 Gene3D G3DSA:3.40.190.10 180 266 9.0E-14 T 22-04-2016 LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 Gene3D G3DSA:3.40.190.10 99 179 2.6E-9 T 22-04-2016 LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 SUPERFAMILY SSF53850 96 299 3.62E-25 T 22-04-2016 LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.0E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.0E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 4.0E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 PANTHER PTHR30427 5 320 2.6E-76 T 22-04-2016 LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 SUPERFAMILY SSF46785 5 84 8.71E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 PANTHER PTHR30427:SF1 5 320 2.6E-76 T 22-04-2016 LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 Gene3D G3DSA:1.10.10.10 4 85 2.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.2E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02440 c1228920c51494d4ac5fcf4826194b51 320 Pfam PF03466 LysR substrate binding domain 94 294 2.9E-25 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS11165 f427ca61f1f741be67e23112ff03451e 222 PANTHER PTHR26402:SF537 1 221 2.5E-149 T 22-04-2016 LK04_RS11165 f427ca61f1f741be67e23112ff03451e 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 7.4E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS11165 f427ca61f1f741be67e23112ff03451e 222 SMART SM00862 145 220 3.9E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS11165 f427ca61f1f741be67e23112ff03451e 222 SMART SM00448 1 112 1.1E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS11165 f427ca61f1f741be67e23112ff03451e 222 Gene3D G3DSA:1.10.10.10 123 221 2.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS11165 f427ca61f1f741be67e23112ff03451e 222 SUPERFAMILY SSF52172 1 173 7.97E-39 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS11165 f427ca61f1f741be67e23112ff03451e 222 Gene3D G3DSA:3.40.50.2300 1 122 1.0E-35 T 22-04-2016 LK04_RS11165 f427ca61f1f741be67e23112ff03451e 222 Pfam PF00072 Response regulator receiver domain 3 112 4.8E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS11165 f427ca61f1f741be67e23112ff03451e 222 PANTHER PTHR26402 1 221 2.5E-149 T 22-04-2016 LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 SMART SM00922 125 230 9.3E-19 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 3.2E-29 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 76.363 T 22-04-2016 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6|UniPathway: UPA00081 LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 PANTHER PTHR13794:SF4 1 382 3.1E-157 T 22-04-2016 LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 SUPERFAMILY SSF51604 95 357 3.28E-76 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 Gene3D G3DSA:3.30.390.10 1 116 5.2E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 Gene3D G3DSA:3.20.20.120 117 341 5.7E-81 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 SUPERFAMILY SSF54826 1 112 1.69E-32 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 PANTHER PTHR13794 1 382 3.1E-157 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS18820 60af4876c95389ce83938dc7e61d9a86 382 Pfam PF13378 Enolase C-terminal domain-like 134 355 4.5E-56 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS02285 dd8d241230abeaa8b9ead18bd371cd4d 235 PANTHER PTHR10799:SF750 109 235 1.6E-25 T 22-04-2016 LK04_RS02285 dd8d241230abeaa8b9ead18bd371cd4d 235 PANTHER PTHR10799:SF750 1 51 1.6E-25 T 22-04-2016 LK04_RS02285 dd8d241230abeaa8b9ead18bd371cd4d 235 Pfam PF00990 Diguanylate cyclase, GGDEF domain 81 231 2.8E-35 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02285 dd8d241230abeaa8b9ead18bd371cd4d 235 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 77 233 3.4E-38 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02285 dd8d241230abeaa8b9ead18bd371cd4d 235 SMART SM00267 70 235 3.7E-52 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02285 dd8d241230abeaa8b9ead18bd371cd4d 235 SUPERFAMILY SSF55073 86 234 1.65E-38 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS02285 dd8d241230abeaa8b9ead18bd371cd4d 235 Gene3D G3DSA:3.30.70.270 82 234 6.4E-42 T 22-04-2016 LK04_RS02285 dd8d241230abeaa8b9ead18bd371cd4d 235 PANTHER PTHR10799 109 235 1.6E-25 T 22-04-2016 LK04_RS02285 dd8d241230abeaa8b9ead18bd371cd4d 235 PANTHER PTHR10799 1 51 1.6E-25 T 22-04-2016 LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 Pfam PF03466 LysR substrate binding domain 89 294 4.1E-45 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 SUPERFAMILY SSF53850 90 297 4.71E-48 T 22-04-2016 LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 Gene3D G3DSA:1.10.10.10 4 82 4.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 PANTHER PTHR30537 1 298 6.3E-163 T 22-04-2016 LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 SUPERFAMILY SSF46785 4 84 1.89E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.6E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 Gene3D G3DSA:3.40.190.10 178 259 7.4E-22 T 22-04-2016 LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 PANTHER PTHR30537:SF11 1 298 6.3E-163 T 22-04-2016 LK04_RS19815 c9f519a952d675317c9188609ec6e386 299 Gene3D G3DSA:3.40.190.10 92 177 2.9E-28 T 22-04-2016 LK04_RS19255 403885500e6b0357d24cacefef5cbe1a 158 Gene3D G3DSA:1.10.10.10 12 148 2.8E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19255 403885500e6b0357d24cacefef5cbe1a 158 Pfam PF01047 MarR family 49 101 6.9E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS19255 403885500e6b0357d24cacefef5cbe1a 158 PANTHER PTHR33164 49 158 4.3E-19 T 22-04-2016 LK04_RS19255 403885500e6b0357d24cacefef5cbe1a 158 SMART SM00347 37 137 4.7E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS19255 403885500e6b0357d24cacefef5cbe1a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 1.6E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS19255 403885500e6b0357d24cacefef5cbe1a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 1.6E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS19255 403885500e6b0357d24cacefef5cbe1a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 1.6E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS19255 403885500e6b0357d24cacefef5cbe1a 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 1.6E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS19255 403885500e6b0357d24cacefef5cbe1a 158 SUPERFAMILY SSF46785 12 151 9.91E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 1.2E-117 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 Gene3D G3DSA:1.10.10.10 8 76 2.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 153.941 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 7.3E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 Pfam PF07840 FadR C-terminal domain 72 235 2.7E-69 T 22-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 PANTHER PTHR11751 13 97 8.3E-57 T 22-04-2016 LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 SUPERFAMILY SSF46785 11 87 1.5E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 PANTHER PTHR11751:SF402 13 97 8.3E-57 T 22-04-2016 LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 Gene3D G3DSA:1.20.120.530 80 237 8.0E-63 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 SMART SM00345 12 71 4.4E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS07915 fc9f74770d3bdaab810ae48bc623d5aa 239 SUPERFAMILY SSF48008 79 231 1.7E-60 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS05475 4e2f9b5d9e8081dfb561effbf3c03172 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 44.567 T 22-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 LK04_RS05475 4e2f9b5d9e8081dfb561effbf3c03172 199 SUPERFAMILY SSF109604 4 185 2.57E-43 T 22-04-2016 LK04_RS05475 4e2f9b5d9e8081dfb561effbf3c03172 199 SMART SM00471 26 151 4.3E-7 T 22-04-2016 IPR003607 HD/PDEase domain LK04_RS05475 4e2f9b5d9e8081dfb561effbf3c03172 199 Pfam PF13023 HD domain 11 158 1.4E-18 T 22-04-2016 IPR006674 HD domain LK04_RS05475 4e2f9b5d9e8081dfb561effbf3c03172 199 Gene3D G3DSA:1.10.3210.10 4 194 1.1E-50 T 22-04-2016 IPR006674 HD domain LK04_RS05475 4e2f9b5d9e8081dfb561effbf3c03172 199 PANTHER PTHR11845 4 190 1.6E-46 T 22-04-2016 LK04_RS05475 4e2f9b5d9e8081dfb561effbf3c03172 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 9.0E-38 T 22-04-2016 LK04_RS11970 f7582ba720c31a5fbccb2d92088e7a3f 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 395 6.1E-80 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LK04_RS11970 f7582ba720c31a5fbccb2d92088e7a3f 401 Gene3D G3DSA:3.20.140.10 5 395 5.3E-145 T 22-04-2016 LK04_RS11970 f7582ba720c31a5fbccb2d92088e7a3f 401 PIRSF PIRSF000484 2 397 2.6E-58 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LK04_RS11970 f7582ba720c31a5fbccb2d92088e7a3f 401 PANTHER PTHR11098 7 397 5.7E-249 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LK04_RS11970 f7582ba720c31a5fbccb2d92088e7a3f 401 PANTHER PTHR11098:SF14 7 397 5.7E-249 T 22-04-2016 LK04_RS11970 f7582ba720c31a5fbccb2d92088e7a3f 401 SUPERFAMILY SSF54675 4 137 2.09E-44 T 22-04-2016 LK04_RS11970 f7582ba720c31a5fbccb2d92088e7a3f 401 SUPERFAMILY SSF51690 120 393 2.35E-85 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 LK04_RS11970 f7582ba720c31a5fbccb2d92088e7a3f 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 396 48.583 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LK04_RS11970 f7582ba720c31a5fbccb2d92088e7a3f 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 395 9.2E-166 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LK04_RS16640 0b1847c939dd9ada3d4613db65e233b0 161 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 10 155 1.9E-59 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS16640 0b1847c939dd9ada3d4613db65e233b0 161 PANTHER PTHR30505:SF6 3 161 1.6E-81 T 22-04-2016 LK04_RS16640 0b1847c939dd9ada3d4613db65e233b0 161 Gene3D G3DSA:3.40.930.10 4 159 1.7E-46 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS16640 0b1847c939dd9ada3d4613db65e233b0 161 SUPERFAMILY SSF55804 9 155 1.19E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LK04_RS16640 0b1847c939dd9ada3d4613db65e233b0 161 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 14 155 1.8E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS16640 0b1847c939dd9ada3d4613db65e233b0 161 PANTHER PTHR30505 3 161 1.6E-81 T 22-04-2016 LK04_RS16640 0b1847c939dd9ada3d4613db65e233b0 161 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS09420 a4fa08ed7060c4edc2afb2d25e6af66b 341 PANTHER PTHR30465 14 172 1.1E-105 T 22-04-2016 LK04_RS09420 a4fa08ed7060c4edc2afb2d25e6af66b 341 PANTHER PTHR30465 198 341 1.1E-105 T 22-04-2016 LK04_RS09420 a4fa08ed7060c4edc2afb2d25e6af66b 341 SUPERFAMILY SSF161098 97 165 1.19E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09420 a4fa08ed7060c4edc2afb2d25e6af66b 341 SUPERFAMILY SSF161098 204 326 1.19E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09420 a4fa08ed7060c4edc2afb2d25e6af66b 341 PANTHER PTHR30465:SF0 14 172 1.1E-105 T 22-04-2016 LK04_RS09420 a4fa08ed7060c4edc2afb2d25e6af66b 341 PANTHER PTHR30465:SF0 198 341 1.1E-105 T 22-04-2016 LK04_RS09420 a4fa08ed7060c4edc2afb2d25e6af66b 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 340 1.5E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09420 a4fa08ed7060c4edc2afb2d25e6af66b 341 Gene3D G3DSA:1.10.3720.10 207 337 2.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09420 a4fa08ed7060c4edc2afb2d25e6af66b 341 Gene3D G3DSA:1.10.3720.10 95 168 2.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05950 73aa3a2b247cd376b22b7c8edebfd5a3 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 1.3E-33 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS05950 73aa3a2b247cd376b22b7c8edebfd5a3 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LK04_RS05950 73aa3a2b247cd376b22b7c8edebfd5a3 336 Gene3D G3DSA:3.40.50.720 168 277 4.8E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05950 73aa3a2b247cd376b22b7c8edebfd5a3 336 PANTHER PTHR11695:SF554 12 333 5.5E-181 T 22-04-2016 LK04_RS05950 73aa3a2b247cd376b22b7c8edebfd5a3 336 Gene3D G3DSA:3.90.180.10 1 167 1.3E-54 T 22-04-2016 IPR011032 GroES-like LK04_RS05950 73aa3a2b247cd376b22b7c8edebfd5a3 336 Pfam PF00107 Zinc-binding dehydrogenase 171 295 3.9E-18 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS05950 73aa3a2b247cd376b22b7c8edebfd5a3 336 PANTHER PTHR11695 12 333 5.5E-181 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS05950 73aa3a2b247cd376b22b7c8edebfd5a3 336 SUPERFAMILY SSF50129 1 170 4.57E-53 T 22-04-2016 IPR011032 GroES-like LK04_RS05950 73aa3a2b247cd376b22b7c8edebfd5a3 336 SUPERFAMILY SSF51735 137 302 2.82E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS14230 7d1e8f6effdea804429a2efd6a590d5e 454 PIRSF PIRSF006060 1 449 1.2E-68 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS14230 7d1e8f6effdea804429a2efd6a590d5e 454 Pfam PF13520 Amino acid permease 9 419 2.1E-39 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS14230 7d1e8f6effdea804429a2efd6a590d5e 454 PANTHER PTHR11785 3 435 7.2E-141 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS14230 7d1e8f6effdea804429a2efd6a590d5e 454 PANTHER PTHR11785:SF337 3 435 7.2E-141 T 22-04-2016 LK04_RS14230 7d1e8f6effdea804429a2efd6a590d5e 454 TIGRFAM TIGR00908 2A0305: ethanolamine permease 2 449 7.1E-191 T 22-04-2016 IPR004757 Ethanolamine permease LK04_RS09765 9196a2ca658ccb16884b87c1bc8f81e0 241 SUPERFAMILY SSF54001 96 221 2.55E-12 T 22-04-2016 LK04_RS09765 9196a2ca658ccb16884b87c1bc8f81e0 241 PANTHER PTHR34858 15 226 1.5E-33 T 22-04-2016 LK04_RS09765 9196a2ca658ccb16884b87c1bc8f81e0 241 Gene3D G3DSA:3.90.1720.10 110 220 4.7E-12 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS09765 9196a2ca658ccb16884b87c1bc8f81e0 241 SUPERFAMILY SSF102712 14 91 8.89E-10 T 22-04-2016 LK04_RS09765 9196a2ca658ccb16884b87c1bc8f81e0 241 PANTHER PTHR34858:SF1 15 226 1.5E-33 T 22-04-2016 LK04_RS09765 9196a2ca658ccb16884b87c1bc8f81e0 241 Gene3D G3DSA:3.40.140.10 14 109 3.2E-9 T 22-04-2016 LK04_RS09765 9196a2ca658ccb16884b87c1bc8f81e0 241 Pfam PF00877 NlpC/P60 family 105 206 7.3E-10 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS06475 230c29a01b047e0c3dde4f3dac787257 275 PANTHER PTHR30429 9 275 1.3E-99 T 22-04-2016 IPR004872 Lipoprotein NlpA family LK04_RS06475 230c29a01b047e0c3dde4f3dac787257 275 Gene3D G3DSA:3.40.190.10 37 168 9.1E-55 T 22-04-2016 LK04_RS06475 230c29a01b047e0c3dde4f3dac787257 275 Pfam PF03180 NLPA lipoprotein 40 275 7.5E-88 T 22-04-2016 IPR004872 Lipoprotein NlpA family LK04_RS06475 230c29a01b047e0c3dde4f3dac787257 275 SUPERFAMILY SSF53850 39 275 2.13E-75 T 22-04-2016 LK04_RS06475 230c29a01b047e0c3dde4f3dac787257 275 PIRSF PIRSF002854 5 275 3.3E-96 T 22-04-2016 IPR004872 Lipoprotein NlpA family LK04_RS05845 42bc0691b6c7aed94889017ef5e72494 331 SUPERFAMILY SSF53822 25 330 3.03E-83 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS05845 42bc0691b6c7aed94889017ef5e72494 331 Pfam PF13407 Periplasmic binding protein domain 28 300 1.8E-62 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS05845 42bc0691b6c7aed94889017ef5e72494 331 PANTHER PTHR30036 7 331 4.2E-133 T 22-04-2016 LK04_RS05845 42bc0691b6c7aed94889017ef5e72494 331 Gene3D G3DSA:3.40.50.2300 143 293 2.9E-51 T 22-04-2016 LK04_RS05845 42bc0691b6c7aed94889017ef5e72494 331 Gene3D G3DSA:3.40.50.2300 27 142 3.8E-27 T 22-04-2016 LK04_RS05845 42bc0691b6c7aed94889017ef5e72494 331 PANTHER PTHR30036:SF2 7 331 4.2E-133 T 22-04-2016 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 Pfam PF13247 4Fe-4S dicluster domain 92 188 2.8E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LK04_RS18525 267ce0149473cdac4fab32a874809513 299 PANTHER PTHR11938:SF84 1 203 1.2E-156 T 22-04-2016 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 Gene3D G3DSA:3.30.70.20 104 137 2.8E-11 T 22-04-2016 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 Gene3D G3DSA:3.30.70.20 138 172 9.4E-16 T 22-04-2016 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 SUPERFAMILY SSF54862 28 273 4.71E-72 T 22-04-2016 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 Gene3D G3DSA:3.30.70.20 173 227 2.0E-37 T 22-04-2016 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 Gene3D G3DSA:3.30.70.20 29 103 2.0E-37 T 22-04-2016 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 PIRSF PIRSF036298 1 299 2.6E-165 T 22-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 Gene3D G3DSA:1.20.5.480 247 293 9.5E-26 T 22-04-2016 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 3.1E-143 T 22-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 PANTHER PTHR11938 1 203 1.2E-156 T 22-04-2016 LK04_RS18525 267ce0149473cdac4fab32a874809513 299 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS18525 267ce0149473cdac4fab32a874809513 299 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 4.7E-22 T 22-04-2016 IPR015246 Formate dehydrogenase, transmembrane LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 194 410 7.4E-53 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 1.5E-40 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 1.5E-40 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 190 202 1.5E-40 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 1.5E-40 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 1.5E-40 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 1.5E-40 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 1.5E-40 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 SUPERFAMILY SSF56327 170 435 3.15E-91 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 PANTHER PTHR32092 1 438 3.7E-232 T 22-04-2016 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 Pfam PF02056 Family 4 glycosyl hydrolase 3 184 4.7E-52 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 SUPERFAMILY SSF51735 1 167 7.73E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 Gene3D G3DSA:3.40.50.720 2 167 1.4E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 169 - T 22-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 PANTHER PTHR32092:SF5 1 438 3.7E-232 T 22-04-2016 LK04_RS02340 2432b115e95dd087317d549b9ba980c6 438 Gene3D G3DSA:3.90.110.10 168 434 3.6E-100 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LK04_RS12630 f7cc36c22a461bc46b7a3dd13eae3170 323 SUPERFAMILY SSF46785 26 112 5.01E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12630 f7cc36c22a461bc46b7a3dd13eae3170 323 PANTHER PTHR30126:SF16 26 314 2.6E-64 T 22-04-2016 LK04_RS12630 f7cc36c22a461bc46b7a3dd13eae3170 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 86 2.3E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS12630 f7cc36c22a461bc46b7a3dd13eae3170 323 Gene3D G3DSA:3.40.190.10 134 223 1.0E-10 T 22-04-2016 LK04_RS12630 f7cc36c22a461bc46b7a3dd13eae3170 323 Pfam PF03466 LysR substrate binding domain 132 314 1.1E-18 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS12630 f7cc36c22a461bc46b7a3dd13eae3170 323 SUPERFAMILY SSF53850 133 314 4.52E-21 T 22-04-2016 LK04_RS12630 f7cc36c22a461bc46b7a3dd13eae3170 323 PANTHER PTHR30126 26 314 2.6E-64 T 22-04-2016 LK04_RS12630 f7cc36c22a461bc46b7a3dd13eae3170 323 Gene3D G3DSA:1.10.10.10 26 112 6.5E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14790 c4af2bbcbb7b7ec5851327dad3009f2d 267 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 260 51.454 T 22-04-2016 IPR022958 Uncharacterised protein family UPF0294 LK04_RS14790 c4af2bbcbb7b7ec5851327dad3009f2d 267 Gene3D G3DSA:3.60.10.10 44 261 1.9E-6 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LK04_RS14790 c4af2bbcbb7b7ec5851327dad3009f2d 267 SUPERFAMILY SSF56219 44 260 1.44E-24 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LK04_RS14790 c4af2bbcbb7b7ec5851327dad3009f2d 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 252 7.7E-7 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LK04_RS17660 d8e17b00094d5ec30d8917bcb718d210 276 Pfam PF09339 IclR helix-turn-helix domain 29 79 5.9E-18 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS17660 d8e17b00094d5ec30d8917bcb718d210 276 SMART SM00346 27 117 8.0E-34 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS17660 d8e17b00094d5ec30d8917bcb718d210 276 PANTHER PTHR30136 1 275 4.7E-104 T 22-04-2016 LK04_RS17660 d8e17b00094d5ec30d8917bcb718d210 276 Pfam PF01614 Bacterial transcriptional regulator 147 271 3.7E-40 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal LK04_RS17660 d8e17b00094d5ec30d8917bcb718d210 276 SUPERFAMILY SSF46785 27 100 3.62E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17660 d8e17b00094d5ec30d8917bcb718d210 276 PANTHER PTHR30136:SF3 1 275 4.7E-104 T 22-04-2016 LK04_RS17660 d8e17b00094d5ec30d8917bcb718d210 276 Gene3D G3DSA:3.30.450.40 99 273 8.2E-57 T 22-04-2016 IPR029016 GAF domain-like LK04_RS17660 d8e17b00094d5ec30d8917bcb718d210 276 SUPERFAMILY SSF55781 98 273 2.35E-50 T 22-04-2016 IPR029016 GAF domain-like LK04_RS17660 d8e17b00094d5ec30d8917bcb718d210 276 Gene3D G3DSA:1.10.10.10 17 88 3.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00050 6b573b0edf5f1299f05bcc085a635877 352 SUPERFAMILY SSF56266 27 338 3.92E-91 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LK04_RS00050 6b573b0edf5f1299f05bcc085a635877 352 PANTHER PTHR36512:SF1 18 350 7.9E-60 T 22-04-2016 LK04_RS00050 6b573b0edf5f1299f05bcc085a635877 352 Gene3D G3DSA:3.60.70.12 26 340 4.5E-112 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LK04_RS00050 6b573b0edf5f1299f05bcc085a635877 352 Pfam PF03576 Peptidase family S58 32 334 7.4E-103 T 22-04-2016 IPR005321 Peptidase S58, DmpA LK04_RS00050 6b573b0edf5f1299f05bcc085a635877 352 PANTHER PTHR36512 18 350 7.9E-60 T 22-04-2016 LK04_RS18940 cea881c4f03a0fe0a8f3ff985318b904 377 PANTHER PTHR18964 65 321 4.5E-38 T 22-04-2016 LK04_RS18940 cea881c4f03a0fe0a8f3ff985318b904 377 Pfam PF00480 ROK family 92 339 1.7E-42 T 22-04-2016 IPR000600 ROK family LK04_RS18940 cea881c4f03a0fe0a8f3ff985318b904 377 SUPERFAMILY SSF53067 91 337 5.52E-31 T 22-04-2016 LK04_RS18940 cea881c4f03a0fe0a8f3ff985318b904 377 Gene3D G3DSA:3.30.420.40 86 217 2.3E-25 T 22-04-2016 LK04_RS18940 cea881c4f03a0fe0a8f3ff985318b904 377 Gene3D G3DSA:1.10.10.10 11 78 8.9E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18940 cea881c4f03a0fe0a8f3ff985318b904 377 ProSitePatterns PS01125 ROK family signature. 213 240 - T 22-04-2016 IPR000600 ROK family LK04_RS18940 cea881c4f03a0fe0a8f3ff985318b904 377 SUPERFAMILY SSF46785 11 74 2.52E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18940 cea881c4f03a0fe0a8f3ff985318b904 377 Gene3D G3DSA:3.30.420.40 218 342 4.3E-30 T 22-04-2016 LK04_RS18940 cea881c4f03a0fe0a8f3ff985318b904 377 PANTHER PTHR18964:SF123 65 321 4.5E-38 T 22-04-2016 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 Pfam PF02311 AraC-like ligand binding domain 28 161 1.1E-22 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 Pfam PF12833 Helix-turn-helix domain 204 283 2.3E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 PANTHER PTHR11019 1 289 3.8E-127 T 22-04-2016 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 SUPERFAMILY SSF51215 12 168 4.71E-34 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 Gene3D G3DSA:1.10.10.60 235 285 4.3E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 PANTHER PTHR11019:SF123 1 289 3.8E-127 T 22-04-2016 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 SUPERFAMILY SSF46689 235 285 1.21E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 1.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 281 1.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 277 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 Gene3D G3DSA:1.10.10.60 177 234 2.1E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 SMART SM00342 198 281 7.8E-32 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 SUPERFAMILY SSF46689 181 231 4.48E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS10050 1bc95f624c16bee3c847074378cdeac4 305 Gene3D G3DSA:2.60.120.280 13 173 9.0E-44 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LK04_RS15665 7e47c052aed9ca72c3c11f3df13c4a96 143 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 4 131 1.6E-26 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein LK04_RS15665 7e47c052aed9ca72c3c11f3df13c4a96 143 Gene3D G3DSA:3.10.450.40 32 115 1.3E-11 T 22-04-2016 LK04_RS15665 7e47c052aed9ca72c3c11f3df13c4a96 143 Pfam PF04965 Gene 25-like lysozyme 33 114 2.8E-12 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD LK04_RS15665 7e47c052aed9ca72c3c11f3df13c4a96 143 SUPERFAMILY SSF160719 30 119 2.35E-19 T 22-04-2016 LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 Gene3D G3DSA:1.10.10.10 4 75 9.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 SMART SM00345 12 71 3.6E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 3.0E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 Gene3D G3DSA:1.20.120.530 99 239 3.2E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 PANTHER PTHR11751 93 116 3.7E-32 T 22-04-2016 LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 PANTHER PTHR11751 6 73 3.7E-32 T 22-04-2016 LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 SUPERFAMILY SSF48008 97 235 1.57E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 SUPERFAMILY SSF46785 6 75 2.72E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.8E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.8E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 Pfam PF07729 FCD domain 100 226 1.0E-24 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 PANTHER PTHR11751:SF382 93 116 3.7E-32 T 22-04-2016 LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 PANTHER PTHR11751:SF382 6 73 3.7E-32 T 22-04-2016 LK04_RS14395 8250a4b8c6c4cd3069a728e12d98e075 261 SMART SM00895 100 228 7.9E-21 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.6E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 SUPERFAMILY SSF53822 60 340 1.77E-96 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 59.975 T 22-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 4.3E-43 T 22-04-2016 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 Gene3D G3DSA:3.40.50.2300 61 170 5.0E-35 T 22-04-2016 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 SMART SM00354 1 71 1.5E-37 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 SUPERFAMILY SSF47413 1 59 3.21E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 Gene3D G3DSA:3.40.50.2300 171 332 3.8E-64 T 22-04-2016 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 PANTHER PTHR30146 1 340 5.1E-163 T 22-04-2016 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 PANTHER PTHR30146:SF30 1 340 5.1E-163 T 22-04-2016 LK04_RS10285 ad1226711c598e29ef7d68cc872e4c6e 341 Gene3D G3DSA:1.10.260.40 2 60 5.2E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS17145 7d4349e12d024a0eb29236ceacae683f 479 Pfam PF00367 phosphotransferase system, EIIB 10 43 4.8E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS17145 7d4349e12d024a0eb29236ceacae683f 479 PANTHER PTHR30175:SF3 1 479 3.1E-204 T 22-04-2016 LK04_RS17145 7d4349e12d024a0eb29236ceacae683f 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LK04_RS17145 7d4349e12d024a0eb29236ceacae683f 479 Gene3D G3DSA:3.30.1360.60 8 84 1.6E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS17145 7d4349e12d024a0eb29236ceacae683f 479 SUPERFAMILY SSF55604 9 77 1.7E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LK04_RS17145 7d4349e12d024a0eb29236ceacae683f 479 Pfam PF02378 Phosphotransferase system, EIIC 123 406 3.8E-34 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS17145 7d4349e12d024a0eb29236ceacae683f 479 PANTHER PTHR30175 1 479 3.1E-204 T 22-04-2016 LK04_RS09510 d1712673def63a2b7e257cf2f85fb43a 104 PANTHER PTHR33843 1 97 8.6E-17 T 22-04-2016 LK04_RS09510 d1712673def63a2b7e257cf2f85fb43a 104 PANTHER PTHR33843:SF2 1 97 8.6E-17 T 22-04-2016 LK04_RS09510 d1712673def63a2b7e257cf2f85fb43a 104 SUPERFAMILY SSF52794 1 94 2.01E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS09510 d1712673def63a2b7e257cf2f85fb43a 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 85 8.0E-10 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS09510 d1712673def63a2b7e257cf2f85fb43a 104 Gene3D G3DSA:3.40.50.270 1 94 4.3E-10 T 22-04-2016 LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 169 2.1E-40 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 Gene3D G3DSA:3.40.50.300 10 193 1.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 8.1E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 8.1E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 SUPERFAMILY SSF52540 11 205 1.96E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 Pfam PF07650 KH domain 209 285 8.5E-20 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 PANTHER PTHR11649:SF3 5 300 2.6E-126 T 22-04-2016 LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.4E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.666 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 Gene3D G3DSA:3.30.300.20 194 294 7.8E-41 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 SUPERFAMILY SSF54814 182 298 3.2E-41 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 PANTHER PTHR11649 5 300 2.6E-126 T 22-04-2016 LK04_RS04035 bab2a91995aed0d81cda2cddb5a50102 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 5.6E-117 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 4.4E-49 T 22-04-2016 LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.5E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 4.5E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.5E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PANTHER PTHR24322 157 188 3.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PANTHER PTHR24322 8 141 3.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 SUPERFAMILY SSF51735 3 250 1.43E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 Gene3D G3DSA:3.40.50.720 2 250 1.3E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 9.5E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 9.5E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.5E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 9.5E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 9.5E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS19820 18283f42989e2db16bf343ecbce4fc71 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 9.5E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS04145 0233254df76e1e36b344c7547702ad05 165 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.1E-46 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type LK04_RS04145 0233254df76e1e36b344c7547702ad05 165 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 6.5E-67 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 LK04_RS04145 0233254df76e1e36b344c7547702ad05 165 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 165 49.428 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 LK04_RS04145 0233254df76e1e36b344c7547702ad05 165 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site LK04_RS04145 0233254df76e1e36b344c7547702ad05 165 PANTHER PTHR33221 2 155 5.1E-71 T 22-04-2016 LK04_RS04145 0233254df76e1e36b344c7547702ad05 165 SUPERFAMILY SSF46785 2 133 2.85E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04145 0233254df76e1e36b344c7547702ad05 165 Pfam PF02082 Transcriptional regulator 1 83 5.9E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type LK04_RS04145 0233254df76e1e36b344c7547702ad05 165 Gene3D G3DSA:1.10.10.10 1 134 4.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04145 0233254df76e1e36b344c7547702ad05 165 PANTHER PTHR33221:SF1 2 155 5.1E-71 T 22-04-2016 LK04_RS07410 74e8523df853200316e705bece3b9133 175 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 LK04_RS07410 74e8523df853200316e705bece3b9133 175 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.9E-66 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LK04_RS07410 74e8523df853200316e705bece3b9133 175 SUPERFAMILY SSF53098 3 156 1.67E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS07410 74e8523df853200316e705bece3b9133 175 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.415 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LK04_RS07410 74e8523df853200316e705bece3b9133 175 PANTHER PTHR30194 1 169 6.2E-73 T 22-04-2016 LK04_RS07410 74e8523df853200316e705bece3b9133 175 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 5.2E-43 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LK04_RS07410 74e8523df853200316e705bece3b9133 175 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 5.2E-43 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LK04_RS07410 74e8523df853200316e705bece3b9133 175 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 5.2E-43 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LK04_RS07410 74e8523df853200316e705bece3b9133 175 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 5.2E-43 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LK04_RS07410 74e8523df853200316e705bece3b9133 175 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 5.2E-43 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LK04_RS07410 74e8523df853200316e705bece3b9133 175 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 157 7.1E-83 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LK04_RS07410 74e8523df853200316e705bece3b9133 175 Gene3D G3DSA:3.30.420.10 3 155 1.0E-66 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS13940 c4c98a4f334615d2d50aec8bc90d406c 571 SUPERFAMILY SSF53850 122 554 1.07E-49 T 22-04-2016 LK04_RS13940 c4c98a4f334615d2d50aec8bc90d406c 571 PANTHER PTHR30290 22 81 2.1E-172 T 22-04-2016 LK04_RS13940 c4c98a4f334615d2d50aec8bc90d406c 571 PANTHER PTHR30290 120 566 2.1E-172 T 22-04-2016 LK04_RS13940 c4c98a4f334615d2d50aec8bc90d406c 571 PANTHER PTHR30290:SF19 22 81 2.1E-172 T 22-04-2016 LK04_RS13940 c4c98a4f334615d2d50aec8bc90d406c 571 PANTHER PTHR30290:SF19 120 566 2.1E-172 T 22-04-2016 LK04_RS13940 c4c98a4f334615d2d50aec8bc90d406c 571 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 163 301 9.3E-11 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS13940 c4c98a4f334615d2d50aec8bc90d406c 571 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 1.3E-31 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain LK04_RS13940 c4c98a4f334615d2d50aec8bc90d406c 571 Gene3D G3DSA:3.90.76.10 132 272 2.5E-20 T 22-04-2016 LK04_RS19645 6ebfc8a30ffa086e694e09d6761dafb2 298 Gene3D G3DSA:3.20.20.220 10 294 6.6E-109 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like LK04_RS19645 6ebfc8a30ffa086e694e09d6761dafb2 298 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 1.1E-108 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 LK04_RS19645 6ebfc8a30ffa086e694e09d6761dafb2 298 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 9.6E-106 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 LK04_RS19645 6ebfc8a30ffa086e694e09d6761dafb2 298 PANTHER PTHR21091 149 280 4.4E-46 T 22-04-2016 LK04_RS19645 6ebfc8a30ffa086e694e09d6761dafb2 298 SUPERFAMILY SSF51730 22 294 1.82E-97 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like LK04_RS16805 7e7127fee580d8a550df43f9bc0b2f19 279 Gene3D G3DSA:3.40.190.10 114 213 5.1E-9 T 22-04-2016 LK04_RS16805 7e7127fee580d8a550df43f9bc0b2f19 279 SUPERFAMILY SSF53850 3 255 3.36E-52 T 22-04-2016 LK04_RS16805 7e7127fee580d8a550df43f9bc0b2f19 279 Gene3D G3DSA:3.40.190.10 215 256 3.0E-34 T 22-04-2016 LK04_RS16805 7e7127fee580d8a550df43f9bc0b2f19 279 Gene3D G3DSA:3.40.190.10 32 113 3.0E-34 T 22-04-2016 LK04_RS16805 7e7127fee580d8a550df43f9bc0b2f19 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 254 6.9E-46 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS16805 7e7127fee580d8a550df43f9bc0b2f19 279 PANTHER PTHR18966 8 279 6.8E-34 T 22-04-2016 LK04_RS16805 7e7127fee580d8a550df43f9bc0b2f19 279 PANTHER PTHR18966:SF191 8 279 6.8E-34 T 22-04-2016 LK04_RS16805 7e7127fee580d8a550df43f9bc0b2f19 279 SMART SM00062 35 256 7.8E-40 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS02590 ec4642ab9240c56bf41b9ef21d99a891 173 PANTHER PTHR30108:SF10 4 172 7.6E-72 T 22-04-2016 LK04_RS02590 ec4642ab9240c56bf41b9ef21d99a891 173 SUPERFAMILY SSF52507 3 168 3.14E-53 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LK04_RS02590 ec4642ab9240c56bf41b9ef21d99a891 173 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 166 1.4E-60 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 LK04_RS02590 ec4642ab9240c56bf41b9ef21d99a891 173 Pfam PF02441 Flavoprotein 4 109 1.8E-22 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LK04_RS02590 ec4642ab9240c56bf41b9ef21d99a891 173 PANTHER PTHR30108 4 172 7.6E-72 T 22-04-2016 LK04_RS02590 ec4642ab9240c56bf41b9ef21d99a891 173 Gene3D G3DSA:3.40.50.1950 2 170 1.2E-66 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LK04_RS11570 827904cd17d7b9d96c858e16a9d09a1c 773 SUPERFAMILY SSF82866 587 763 5.23E-14 T 22-04-2016 LK04_RS11570 827904cd17d7b9d96c858e16a9d09a1c 773 Gene3D G3DSA:1.20.1640.10 606 707 3.4E-8 T 22-04-2016 LK04_RS11570 827904cd17d7b9d96c858e16a9d09a1c 773 Gene3D G3DSA:1.20.1640.10 219 404 6.9E-14 T 22-04-2016 LK04_RS11570 827904cd17d7b9d96c858e16a9d09a1c 773 SUPERFAMILY SSF82866 220 404 3.92E-18 T 22-04-2016 LK04_RS11570 827904cd17d7b9d96c858e16a9d09a1c 773 Pfam PF03176 MMPL family 221 404 7.1E-9 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 LK04_RS15605 1d9b569fc8ec9fbf4d70b50decae3a45 167 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 161 17.318 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LK04_RS15605 1d9b569fc8ec9fbf4d70b50decae3a45 167 ProSitePatterns PS00855 Signal peptidases II signature. 103 115 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LK04_RS15605 1d9b569fc8ec9fbf4d70b50decae3a45 167 TIGRFAM TIGR00077 lspA: signal peptidase II 1 161 7.7E-55 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LK04_RS15605 1d9b569fc8ec9fbf4d70b50decae3a45 167 PANTHER PTHR33695:SF1 8 165 1.2E-59 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LK04_RS15605 1d9b569fc8ec9fbf4d70b50decae3a45 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 3.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LK04_RS15605 1d9b569fc8ec9fbf4d70b50decae3a45 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 3.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LK04_RS15605 1d9b569fc8ec9fbf4d70b50decae3a45 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 3.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LK04_RS15605 1d9b569fc8ec9fbf4d70b50decae3a45 167 Pfam PF01252 Signal peptidase (SPase) II 15 154 1.9E-35 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LK04_RS15605 1d9b569fc8ec9fbf4d70b50decae3a45 167 PANTHER PTHR33695 8 165 1.2E-59 T 22-04-2016 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 PANTHER PTHR11911 1 281 4.8E-247 T 22-04-2016 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 PANTHER PTHR11911 299 486 4.8E-247 T 22-04-2016 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.731 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 PANTHER PTHR11911:SF6 1 281 4.8E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 PANTHER PTHR11911:SF6 299 486 4.8E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 3.2E-196 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 SUPERFAMILY SSF54631 94 203 1.64E-24 T 22-04-2016 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 SMART SM01240 7 473 0.0 T 22-04-2016 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.8E-159 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 PIRSF PIRSF000130 1 488 5.2E-195 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 SMART SM00116 96 144 1.5E-10 T 22-04-2016 IPR000644 CBS domain LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 SMART SM00116 158 206 1.5E-6 T 22-04-2016 IPR000644 CBS domain LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 Pfam PF00571 CBS domain 149 202 3.1E-4 T 22-04-2016 IPR000644 CBS domain LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 Pfam PF00571 CBS domain 95 140 1.1E-7 T 22-04-2016 IPR000644 CBS domain LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 SUPERFAMILY SSF51412 217 477 1.44E-124 T 22-04-2016 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 SUPERFAMILY SSF51412 2 90 1.44E-124 T 22-04-2016 LK04_RS04250 8d56aa86bb52c53e80d082ce41910e0f 488 Gene3D G3DSA:3.20.20.70 2 485 2.9E-192 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS16720 cbfa3be8eaa1cd7460f28f9e8c7fd008 44 Pfam PF08085 Entericidin EcnA/B family 23 43 5.0E-10 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 LK04_RS15870 29aea2366794aed8385ee464415dd1e0 598 PANTHER PTHR11895:SF24 8 453 5.6E-152 T 22-04-2016 LK04_RS15870 29aea2366794aed8385ee464415dd1e0 598 PANTHER PTHR11895 8 453 5.6E-152 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS15870 29aea2366794aed8385ee464415dd1e0 598 SUPERFAMILY SSF75304 9 446 4.84E-105 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS15870 29aea2366794aed8385ee464415dd1e0 598 Gene3D G3DSA:3.90.1300.10 6 447 3.7E-103 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS15870 29aea2366794aed8385ee464415dd1e0 598 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 39 593 1.2E-240 T 22-04-2016 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 LK04_RS15870 29aea2366794aed8385ee464415dd1e0 598 Pfam PF01425 Amidase 25 435 4.8E-84 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.3E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.928 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 PANTHER PTHR10359 1 210 7.0E-90 T 22-04-2016 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 Gene3D G3DSA:1.10.1670.10 123 208 1.4E-34 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.0E-87 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 PIRSF PIRSF001435 1 210 4.9E-49 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 SMART SM00478 38 185 2.9E-52 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 PANTHER PTHR10359:SF18 1 210 7.0E-90 T 22-04-2016 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 Gene3D G3DSA:1.10.340.30 25 122 4.1E-33 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 SMART SM00525 186 206 5.7E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 3.0E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 SUPERFAMILY SSF48150 2 205 1.37E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 LK04_RS10145 1a8ee1321ecb59b9b3f5dbdcbaeaa05b 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 1.5E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LK04_RS08125 459046b1f41a2ab77554a0c0947904dc 334 PANTHER PTHR24220 13 329 6.1E-196 T 22-04-2016 LK04_RS08125 459046b1f41a2ab77554a0c0947904dc 334 SMART SM00382 49 242 2.3E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08125 459046b1f41a2ab77554a0c0947904dc 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 4.5E-28 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS08125 459046b1f41a2ab77554a0c0947904dc 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS08125 459046b1f41a2ab77554a0c0947904dc 334 Pfam PF00005 ABC transporter 41 192 3.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS08125 459046b1f41a2ab77554a0c0947904dc 334 Gene3D G3DSA:3.40.50.300 8 268 5.8E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08125 459046b1f41a2ab77554a0c0947904dc 334 PANTHER PTHR24220:SF544 13 329 6.1E-196 T 22-04-2016 LK04_RS08125 459046b1f41a2ab77554a0c0947904dc 334 SUPERFAMILY SSF52540 22 264 1.69E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08125 459046b1f41a2ab77554a0c0947904dc 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 1.8E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS00565 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:1.10.10.10 132 235 1.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00565 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS00565 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00448 5 116 8.6E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS00565 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS00565 d8521a76d5088ea0467c0daab9e28465 239 PANTHER PTHR26402 5 235 1.0E-115 T 22-04-2016 LK04_RS00565 d8521a76d5088ea0467c0daab9e28465 239 PANTHER PTHR26402:SF292 5 235 1.0E-115 T 22-04-2016 LK04_RS00565 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:3.40.50.2300 4 127 1.4E-42 T 22-04-2016 LK04_RS00565 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00862 156 232 1.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS00565 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS00565 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS04530 c3256769d3b474dc4988b04bd3186396 230 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LK04_RS04530 c3256769d3b474dc4988b04bd3186396 230 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LK04_RS04530 c3256769d3b474dc4988b04bd3186396 230 Gene3D G3DSA:3.20.20.70 4 224 3.1E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS04530 c3256769d3b474dc4988b04bd3186396 230 PANTHER PTHR11749:SF3 1 223 1.9E-77 T 22-04-2016 LK04_RS04530 c3256769d3b474dc4988b04bd3186396 230 PANTHER PTHR11749 1 223 1.9E-77 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LK04_RS04530 c3256769d3b474dc4988b04bd3186396 230 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 198 4.5E-59 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LK04_RS04530 c3256769d3b474dc4988b04bd3186396 230 SUPERFAMILY SSF51366 4 217 1.52E-51 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Gene3D G3DSA:1.20.120.160 917 1018 1.6E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Gene3D G3DSA:3.40.190.10 388 451 9.2E-5 T 22-04-2016 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SMART SM00062 290 505 0.0038 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SMART SM00062 49 266 7.4E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Pfam PF00072 Response regulator receiver domain 796 903 7.8E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SUPERFAMILY SSF55874 608 776 1.31E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Pfam PF00512 His Kinase A (phospho-acceptor) domain 558 618 1.8E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 667 775 1.7E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 253 4.6E-9 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 294 501 6.7E-19 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SUPERFAMILY SSF47226 892 999 2.36E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Gene3D G3DSA:1.10.287.130 550 605 6.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 PANTHER PTHR24423 62 71 2.8E-91 T 22-04-2016 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 PANTHER PTHR24423 537 946 2.8E-91 T 22-04-2016 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 PANTHER PTHR24423 369 413 2.8E-91 T 22-04-2016 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Gene3D G3DSA:3.30.565.10 606 776 8.7E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SUPERFAMILY SSF53850 283 501 1.7E-26 T 22-04-2016 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Pfam PF01627 Hpt domain 937 1014 1.2E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Gene3D G3DSA:3.40.50.2300 792 912 1.7E-19 T 22-04-2016 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SUPERFAMILY SSF47384 547 619 2.94E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SMART SM00448 794 906 8.1E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SUPERFAMILY SSF52172 793 911 6.12E-20 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SMART SM00388 558 619 1.5E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SMART SM00073 924 1023 2.3E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SUPERFAMILY SSF53850 47 262 1.9E-16 T 22-04-2016 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Gene3D G3DSA:3.40.190.10 294 336 1.8E-7 T 22-04-2016 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 Gene3D G3DSA:3.40.190.10 48 152 5.2E-7 T 22-04-2016 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 PRINTS PR00344 Bacterial sensor protein C-terminal signature 701 715 2.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 PRINTS PR00344 Bacterial sensor protein C-terminal signature 736 754 2.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 PRINTS PR00344 Bacterial sensor protein C-terminal signature 760 773 2.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 729 2.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS12975 c6363c1f9ef6fc87d64b01515b839c38 1028 SMART SM00387 666 776 8.5E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS01585 b7b0cad31ab10d36b83081ebcd0d2efd 233 SUPERFAMILY SSF51182 1 231 8.9E-47 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS01585 b7b0cad31ab10d36b83081ebcd0d2efd 233 Gene3D G3DSA:2.60.120.10 3 231 9.3E-34 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS01585 b7b0cad31ab10d36b83081ebcd0d2efd 233 PANTHER PTHR13903 1 232 1.4E-134 T 22-04-2016 IPR012093 Pirin LK04_RS01585 b7b0cad31ab10d36b83081ebcd0d2efd 233 PANTHER PTHR13903:SF14 1 232 1.4E-134 T 22-04-2016 LK04_RS01585 b7b0cad31ab10d36b83081ebcd0d2efd 233 Pfam PF02678 Pirin 8 119 1.7E-21 T 22-04-2016 IPR003829 Pirin, N-terminal domain LK04_RS01585 b7b0cad31ab10d36b83081ebcd0d2efd 233 PIRSF PIRSF006232 1 230 1.3E-29 T 22-04-2016 IPR012093 Pirin LK04_RS13325 ffa7004a85786e87265aa9d872a2b487 297 SUPERFAMILY SSF53850 6 270 4.83E-62 T 22-04-2016 LK04_RS13325 ffa7004a85786e87265aa9d872a2b487 297 PANTHER PTHR30085 1 296 1.2E-134 T 22-04-2016 LK04_RS13325 ffa7004a85786e87265aa9d872a2b487 297 SMART SM00062 37 269 6.3E-66 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS13325 ffa7004a85786e87265aa9d872a2b487 297 PANTHER PTHR30085:SF2 1 296 1.2E-134 T 22-04-2016 LK04_RS13325 ffa7004a85786e87265aa9d872a2b487 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 267 9.4E-47 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS13325 ffa7004a85786e87265aa9d872a2b487 297 Gene3D G3DSA:3.40.190.10 123 229 4.1E-31 T 22-04-2016 LK04_RS13325 ffa7004a85786e87265aa9d872a2b487 297 Gene3D G3DSA:3.40.190.10 230 272 3.6E-29 T 22-04-2016 LK04_RS13325 ffa7004a85786e87265aa9d872a2b487 297 Gene3D G3DSA:3.40.190.10 34 122 3.6E-29 T 22-04-2016 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 5.5E-15 T 22-04-2016 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 5.5E-15 T 22-04-2016 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 5.5E-15 T 22-04-2016 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.5E-15 T 22-04-2016 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 SUPERFAMILY SSF51905 3 339 2.28E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 Gene3D G3DSA:3.50.50.60 1 115 3.5E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.6E-8 T 22-04-2016 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 3.6E-8 T 22-04-2016 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.6E-8 T 22-04-2016 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 334 1.4E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 PANTHER PTHR22912 204 346 1.0E-24 T 22-04-2016 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 PANTHER PTHR22912 3 188 1.0E-24 T 22-04-2016 LK04_RS11220 bcc931a923a93f876fc64196d822426b 430 Gene3D G3DSA:3.50.50.60 116 342 2.3E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS16080 c1a42b18bc70a96afe709b34fb423f82 533 PIRSF PIRSF006060 1 455 2.2E-81 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS16080 c1a42b18bc70a96afe709b34fb423f82 533 PANTHER PTHR11785:SF358 6 404 4.5E-137 T 22-04-2016 LK04_RS16080 c1a42b18bc70a96afe709b34fb423f82 533 PANTHER PTHR11785:SF358 443 518 4.5E-137 T 22-04-2016 LK04_RS16080 c1a42b18bc70a96afe709b34fb423f82 533 Pfam PF13520 Amino acid permease 10 376 1.2E-42 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS16080 c1a42b18bc70a96afe709b34fb423f82 533 PANTHER PTHR11785 6 404 4.5E-137 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS16080 c1a42b18bc70a96afe709b34fb423f82 533 PANTHER PTHR11785 443 518 4.5E-137 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS13430 02a7867287431c982b3b34a5dd29fefd 295 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 275 1.7E-36 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS13430 02a7867287431c982b3b34a5dd29fefd 295 Gene3D G3DSA:3.40.190.10 126 231 1.3E-15 T 22-04-2016 LK04_RS13430 02a7867287431c982b3b34a5dd29fefd 295 SMART SM00062 50 279 4.0E-8 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS13430 02a7867287431c982b3b34a5dd29fefd 295 Gene3D G3DSA:3.40.190.10 42 125 6.7E-18 T 22-04-2016 LK04_RS13430 02a7867287431c982b3b34a5dd29fefd 295 Gene3D G3DSA:3.40.190.10 235 275 6.7E-18 T 22-04-2016 LK04_RS13430 02a7867287431c982b3b34a5dd29fefd 295 SUPERFAMILY SSF53850 1 276 1.17E-40 T 22-04-2016 LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 440 598 1.9E-38 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 642 2.8E-291 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 SUPERFAMILY SSF52518 418 628 4.29E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 1.5E-33 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 SUPERFAMILY SSF52518 3 208 8.37E-34 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 Gene3D G3DSA:3.40.50.1220 212 362 7.9E-39 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 SUPERFAMILY SSF52467 186 361 2.31E-39 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 PANTHER PTHR18968 3 644 0.0 T 22-04-2016 LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 Gene3D G3DSA:3.40.50.970 3 211 1.1E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 PANTHER PTHR18968:SF9 3 644 0.0 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 476 495 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 Gene3D G3DSA:3.40.50.970 413 634 2.8E-56 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS00475 760e2b4b8074a95e26cbe8f2d16cf7a8 644 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 1.0E-30 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LK04_RS17285 1397f49dafd1ac17bbb86644fd86718c 402 PANTHER PTHR11879 1 402 1.8E-298 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LK04_RS17285 1397f49dafd1ac17bbb86644fd86718c 402 SUPERFAMILY SSF53383 5 401 4.25E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS17285 1397f49dafd1ac17bbb86644fd86718c 402 Gene3D G3DSA:3.40.640.10 51 321 1.1E-103 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS17285 1397f49dafd1ac17bbb86644fd86718c 402 Pfam PF00155 Aminotransferase class I and II 32 398 2.4E-80 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS17285 1397f49dafd1ac17bbb86644fd86718c 402 PRINTS PR00799 Aspartate aminotransferase signature 212 224 3.2E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LK04_RS17285 1397f49dafd1ac17bbb86644fd86718c 402 PRINTS PR00799 Aspartate aminotransferase signature 347 365 3.2E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LK04_RS17285 1397f49dafd1ac17bbb86644fd86718c 402 PRINTS PR00799 Aspartate aminotransferase signature 279 304 3.2E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LK04_RS17285 1397f49dafd1ac17bbb86644fd86718c 402 PRINTS PR00799 Aspartate aminotransferase signature 181 200 3.2E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LK04_RS17285 1397f49dafd1ac17bbb86644fd86718c 402 PANTHER PTHR11879:SF7 1 402 1.8E-298 T 22-04-2016 LK04_RS17285 1397f49dafd1ac17bbb86644fd86718c 402 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 249 262 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 Pfam PF01546 Peptidase family M20/M25/M40 100 234 5.0E-7 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 SUPERFAMILY SSF53187 6 199 1.06E-60 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 SUPERFAMILY SSF53187 299 328 1.06E-60 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 SUPERFAMILY SSF53187 383 447 1.06E-60 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 PANTHER PTHR30575 105 330 9.8E-214 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 PANTHER PTHR30575 1 87 9.8E-214 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 PANTHER PTHR30575 377 467 9.8E-214 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 PIRSF PIRSF037227 1 481 5.0E-232 T 22-04-2016 IPR017145 Aminobenzoyl-glutamate utilization protein B KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 432 4.5E-101 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 Gene3D G3DSA:3.40.630.10 3 184 2.3E-64 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 Gene3D G3DSA:3.40.630.10 383 459 2.3E-64 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 Gene3D G3DSA:3.40.630.10 296 328 2.3E-64 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 PANTHER PTHR30575:SF5 105 330 9.8E-214 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 PANTHER PTHR30575:SF5 1 87 9.8E-214 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 PANTHER PTHR30575:SF5 377 467 9.8E-214 T 22-04-2016 LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 Gene3D G3DSA:3.30.70.360 188 293 1.8E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS17070 d44924a031aaccdc2446e7c940c3d7bc 481 SUPERFAMILY SSF55031 189 292 1.13E-17 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS08580 6e5592a2a3b2352ed2b970e17521cb07 444 Gene3D G3DSA:1.20.1250.20 260 433 1.2E-23 T 22-04-2016 LK04_RS08580 6e5592a2a3b2352ed2b970e17521cb07 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS08580 6e5592a2a3b2352ed2b970e17521cb07 444 PANTHER PTHR24064:SF234 7 430 2.1E-133 T 22-04-2016 LK04_RS08580 6e5592a2a3b2352ed2b970e17521cb07 444 PANTHER PTHR24064 7 430 2.1E-133 T 22-04-2016 LK04_RS08580 6e5592a2a3b2352ed2b970e17521cb07 444 Gene3D G3DSA:1.20.1250.20 20 204 9.8E-38 T 22-04-2016 LK04_RS08580 6e5592a2a3b2352ed2b970e17521cb07 444 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS08580 6e5592a2a3b2352ed2b970e17521cb07 444 Pfam PF07690 Major Facilitator Superfamily 30 342 1.1E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS08580 6e5592a2a3b2352ed2b970e17521cb07 444 SUPERFAMILY SSF103473 11 433 9.81E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Pfam PF13193 AMP-binding enzyme C-terminal domain 883 961 1.5E-5 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 ProSitePatterns PS00455 Putative AMP-binding domain signature. 611 622 - T 22-04-2016 IPR020845 AMP-binding, conserved site LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Pfam PF00975 Thioesterase domain 1075 1296 1.0E-36 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Gene3D G3DSA:3.40.50.980 620 785 3.4E-46 T 22-04-2016 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 492 897 3.5E-128 T 22-04-2016 IPR010071 Amino acid adenylation domain LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Gene3D G3DSA:1.10.1200.10 978 1057 3.9E-21 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 SUPERFAMILY SSF56801 431 972 3.01E-151 T 22-04-2016 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 SMART SM00823 Phosphopantetheine attachment site 983 1055 0.0016 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Gene3D G3DSA:2.30.38.10 786 864 8.0E-26 T 22-04-2016 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 PANTHER PTHR24095:SF137 13 1051 3.2E-289 T 22-04-2016 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 SUPERFAMILY SSF52777 199 445 4.11E-36 T 22-04-2016 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Pfam PF00668 Condensation domain 13 309 7.1E-51 T 22-04-2016 IPR001242 Condensation domain LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Pfam PF00550 Phosphopantetheine attachment site 988 1051 2.2E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1010 1025 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Gene3D G3DSA:3.30.300.30 868 973 3.0E-29 T 22-04-2016 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 PANTHER PTHR24095 13 1051 3.2E-289 T 22-04-2016 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Gene3D G3DSA:3.40.50.980 465 619 1.8E-44 T 22-04-2016 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Gene3D G3DSA:3.40.50.1820 1058 1178 5.3E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Gene3D G3DSA:3.40.50.1820 1238 1304 5.3E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 SUPERFAMILY SSF47336 979 1052 6.94E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 Pfam PF00501 AMP-binding enzyme 472 874 5.8E-97 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 SMART SM00824 Thioesterase 1077 1299 8.4E-5 T 22-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 SUPERFAMILY SSF52777 20 193 3.34E-28 T 22-04-2016 LK04_RS16485 f7aa8df21d1f1779e04c31615323f587 1304 SUPERFAMILY SSF53474 1057 1303 1.36E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS08710 b1b87855d6a5d41857ce9c4451d051be 418 PANTHER PTHR23501:SF11 11 414 8.9E-209 T 22-04-2016 LK04_RS08710 b1b87855d6a5d41857ce9c4451d051be 418 SUPERFAMILY SSF103473 24 414 6.67E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS08710 b1b87855d6a5d41857ce9c4451d051be 418 Pfam PF07690 Major Facilitator Superfamily 43 262 6.0E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS08710 b1b87855d6a5d41857ce9c4451d051be 418 ProSitePatterns PS00216 Sugar transport proteins signature 1. 93 109 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS08710 b1b87855d6a5d41857ce9c4451d051be 418 Gene3D G3DSA:1.20.1250.20 38 218 4.3E-32 T 22-04-2016 LK04_RS08710 b1b87855d6a5d41857ce9c4451d051be 418 Gene3D G3DSA:1.20.1250.20 239 414 6.1E-17 T 22-04-2016 LK04_RS08710 b1b87855d6a5d41857ce9c4451d051be 418 PANTHER PTHR23501 11 414 8.9E-209 T 22-04-2016 LK04_RS15390 9eb56e9892f7118d10f9b68681039a48 279 Pfam PF08478 POTRA domain, FtsQ-type 58 127 4.6E-22 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type LK04_RS15390 9eb56e9892f7118d10f9b68681039a48 279 Pfam PF03799 Cell division protein FtsQ 131 248 2.8E-25 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB LK04_RS15390 9eb56e9892f7118d10f9b68681039a48 279 PANTHER PTHR35851 7 273 2.5E-77 T 22-04-2016 LK04_RS15390 9eb56e9892f7118d10f9b68681039a48 279 PANTHER PTHR35851:SF1 7 273 2.5E-77 T 22-04-2016 LK04_RS15390 9eb56e9892f7118d10f9b68681039a48 279 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 27 256 24.597 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 LK04_RS18685 9cfb834a02206c4f732eea6d5971cb22 307 PANTHER PTHR23024 59 298 3.7E-43 T 22-04-2016 LK04_RS18685 9cfb834a02206c4f732eea6d5971cb22 307 PANTHER PTHR23024:SF41 59 298 3.7E-43 T 22-04-2016 LK04_RS18685 9cfb834a02206c4f732eea6d5971cb22 307 Pfam PF00326 Prolyl oligopeptidase family 117 284 8.1E-13 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 LK04_RS18685 9cfb834a02206c4f732eea6d5971cb22 307 SUPERFAMILY SSF53474 59 284 1.02E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS18685 9cfb834a02206c4f732eea6d5971cb22 307 Gene3D G3DSA:3.40.50.1820 59 298 9.0E-57 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 PANTHER PTHR24220:SF516 10 382 6.2E-209 T 22-04-2016 LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 SMART SM00382 282 477 4.7E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 SMART SM00382 33 221 1.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 PANTHER PTHR24220 10 382 6.2E-209 T 22-04-2016 LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 SUPERFAMILY SSF52540 8 227 1.96E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 SUPERFAMILY SSF52540 275 490 1.14E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 Gene3D G3DSA:3.40.50.300 275 490 4.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 Gene3D G3DSA:3.40.50.300 7 228 1.8E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 Pfam PF00005 ABC transporter 24 173 5.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 Pfam PF00005 ABC transporter 276 428 6.0E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS10060 3fa7ff8abb45e05c3d2ff054790bf44e 507 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS03905 f3cedc239e70237ad75877803e02c100 219 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 1.9E-62 T 22-04-2016 IPR003828 Protein of unknown function DUF208 LK04_RS03905 f3cedc239e70237ad75877803e02c100 219 PANTHER PTHR36701 3 219 7.8E-88 T 22-04-2016 LK04_RS00800 30f539ece80dc158e62e83c1611c6e26 182 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 1.1E-10 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LK04_RS00800 30f539ece80dc158e62e83c1611c6e26 182 SUPERFAMILY SSF54534 2 140 4.84E-34 T 22-04-2016 LK04_RS00800 30f539ece80dc158e62e83c1611c6e26 182 Gene3D G3DSA:3.10.50.40 126 141 1.8E-17 T 22-04-2016 LK04_RS00800 30f539ece80dc158e62e83c1611c6e26 182 Gene3D G3DSA:3.10.50.40 2 80 1.8E-17 T 22-04-2016 LK04_RS00800 30f539ece80dc158e62e83c1611c6e26 182 PANTHER PTHR10516:SF316 1 83 1.9E-61 T 22-04-2016 LK04_RS00800 30f539ece80dc158e62e83c1611c6e26 182 PANTHER PTHR10516:SF316 129 182 1.9E-61 T 22-04-2016 LK04_RS00800 30f539ece80dc158e62e83c1611c6e26 182 PANTHER PTHR10516 1 83 1.9E-61 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LK04_RS00800 30f539ece80dc158e62e83c1611c6e26 182 PANTHER PTHR10516 129 182 1.9E-61 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LK04_RS08105 9a02703ed371e199d7d962566563cb34 546 PIRSF PIRSF002741 2 545 8.5E-108 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS08105 9a02703ed371e199d7d962566563cb34 546 SUPERFAMILY SSF53850 37 530 9.05E-139 T 22-04-2016 LK04_RS08105 9a02703ed371e199d7d962566563cb34 546 Gene3D G3DSA:3.10.105.10 300 514 8.7E-61 T 22-04-2016 LK04_RS08105 9a02703ed371e199d7d962566563cb34 546 PANTHER PTHR30290:SF10 1 545 1.1E-188 T 22-04-2016 LK04_RS08105 9a02703ed371e199d7d962566563cb34 546 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 110 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site LK04_RS08105 9a02703ed371e199d7d962566563cb34 546 PANTHER PTHR30290 1 545 1.1E-188 T 22-04-2016 LK04_RS08105 9a02703ed371e199d7d962566563cb34 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 466 4.6E-82 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS08105 9a02703ed371e199d7d962566563cb34 546 Gene3D G3DSA:3.90.76.10 50 224 3.5E-49 T 22-04-2016 LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.2E-137 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 PANTHER PTHR30531 3 361 3.9E-151 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 SUPERFAMILY SSF160544 252 355 4.19E-42 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 3.8E-128 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 Gene3D G3DSA:3.40.1690.10 218 357 2.1E-65 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.3E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.3E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.3E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.3E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.3E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LK04_RS07330 29b678b667ebf70ccdd25577dcda10cc 383 PANTHER PTHR30531:SF0 3 361 3.9E-151 T 22-04-2016 LK04_RS15530 d191654c824deb8ca2b62b1b5291efe7 219 PANTHER PTHR11079:SF86 3 218 6.0E-80 T 22-04-2016 LK04_RS15530 d191654c824deb8ca2b62b1b5291efe7 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 3.1E-28 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS15530 d191654c824deb8ca2b62b1b5291efe7 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS15530 d191654c824deb8ca2b62b1b5291efe7 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 217 1.7E-58 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS15530 d191654c824deb8ca2b62b1b5291efe7 219 PANTHER PTHR11079 3 218 6.0E-80 T 22-04-2016 LK04_RS15530 d191654c824deb8ca2b62b1b5291efe7 219 SUPERFAMILY SSF55120 9 216 1.02E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS06005 782097b0ca46087a60fa884cfc0f5b38 408 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 1 406 52.916 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA LK04_RS06005 782097b0ca46087a60fa884cfc0f5b38 408 PANTHER PTHR30469:SF12 54 397 1.9E-187 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA LK04_RS06005 782097b0ca46087a60fa884cfc0f5b38 408 PANTHER PTHR30469:SF12 1 36 1.9E-187 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA LK04_RS06005 782097b0ca46087a60fa884cfc0f5b38 408 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 386 8.5E-77 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS06005 782097b0ca46087a60fa884cfc0f5b38 408 PANTHER PTHR30469 54 397 1.9E-187 T 22-04-2016 LK04_RS06005 782097b0ca46087a60fa884cfc0f5b38 408 PANTHER PTHR30469 1 36 1.9E-187 T 22-04-2016 LK04_RS06005 782097b0ca46087a60fa884cfc0f5b38 408 SUPERFAMILY SSF111369 74 310 2.09E-55 T 22-04-2016 LK04_RS06005 782097b0ca46087a60fa884cfc0f5b38 408 Gene3D G3DSA:2.40.50.100 191 225 4.4E-23 T 22-04-2016 LK04_RS06005 782097b0ca46087a60fa884cfc0f5b38 408 Gene3D G3DSA:2.40.50.100 82 116 4.4E-23 T 22-04-2016 LK04_RS06005 782097b0ca46087a60fa884cfc0f5b38 408 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 305 8.9E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS03485 17c27519c960aebc03a655e4a6bbb7b8 201 Pfam PF01583 Adenylylsulphate kinase 27 180 1.0E-73 T 22-04-2016 LK04_RS03485 17c27519c960aebc03a655e4a6bbb7b8 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 3.8E-88 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 LK04_RS03485 17c27519c960aebc03a655e4a6bbb7b8 201 Gene3D G3DSA:3.40.50.300 6 200 3.5E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03485 17c27519c960aebc03a655e4a6bbb7b8 201 PANTHER PTHR11055 3 199 1.9E-133 T 22-04-2016 LK04_RS03485 17c27519c960aebc03a655e4a6bbb7b8 201 SUPERFAMILY SSF52540 24 195 2.54E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03485 17c27519c960aebc03a655e4a6bbb7b8 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 39.011 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 LK04_RS12475 e35b6873c75b77875e1477f108154d49 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LK04_RS12475 e35b6873c75b77875e1477f108154d49 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 2.7E-70 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12475 e35b6873c75b77875e1477f108154d49 248 SMART SM00079 26 245 2.8E-7 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LK04_RS12475 e35b6873c75b77875e1477f108154d49 248 PANTHER PTHR18966 25 248 3.7E-58 T 22-04-2016 LK04_RS12475 e35b6873c75b77875e1477f108154d49 248 SMART SM00062 26 246 4.3E-70 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12475 e35b6873c75b77875e1477f108154d49 248 Gene3D G3DSA:3.40.190.10 207 246 8.0E-47 T 22-04-2016 LK04_RS12475 e35b6873c75b77875e1477f108154d49 248 Gene3D G3DSA:3.40.190.10 24 102 8.0E-47 T 22-04-2016 LK04_RS12475 e35b6873c75b77875e1477f108154d49 248 SUPERFAMILY SSF53850 9 246 7.83E-73 T 22-04-2016 LK04_RS12475 e35b6873c75b77875e1477f108154d49 248 Gene3D G3DSA:3.40.190.10 103 206 7.3E-33 T 22-04-2016 LK04_RS09570 c98870484b2c3fd012625637d33213a0 310 SUPERFAMILY SSF53850 21 242 7.77E-45 T 22-04-2016 LK04_RS09570 c98870484b2c3fd012625637d33213a0 310 PANTHER PTHR30024:SF3 1 301 5.2E-127 T 22-04-2016 LK04_RS09570 c98870484b2c3fd012625637d33213a0 310 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 25 301 2.5E-64 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 LK04_RS09570 c98870484b2c3fd012625637d33213a0 310 Gene3D G3DSA:3.40.190.10 100 201 1.3E-27 T 22-04-2016 LK04_RS09570 c98870484b2c3fd012625637d33213a0 310 PANTHER PTHR30024 1 301 5.2E-127 T 22-04-2016 LK04_RS09570 c98870484b2c3fd012625637d33213a0 310 Pfam PF09084 NMT1/THI5 like 62 210 1.2E-12 T 22-04-2016 IPR015168 SsuA/THI5-like LK04_RS09570 c98870484b2c3fd012625637d33213a0 310 SMART SM00062 23 237 3.5E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS01840 2e568828f872abea8a09be6f2e50c0d9 484 SUPERFAMILY SSF116734 3 201 6.38E-40 T 22-04-2016 LK04_RS01840 2e568828f872abea8a09be6f2e50c0d9 484 PANTHER PTHR30408 35 273 3.9E-32 T 22-04-2016 LK04_RS01840 2e568828f872abea8a09be6f2e50c0d9 484 PANTHER PTHR30408:SF7 35 273 3.9E-32 T 22-04-2016 LK04_RS01840 2e568828f872abea8a09be6f2e50c0d9 484 Pfam PF01420 Type I restriction modification DNA specificity domain 4 188 1.0E-12 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 LK04_RS01840 2e568828f872abea8a09be6f2e50c0d9 484 SUPERFAMILY SSF116734 256 475 3.27E-30 T 22-04-2016 LK04_RS10405 0c05645a484408585ed39bd2997efb45 348 PIRSF PIRSF001361 1 348 7.3E-159 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS10405 0c05645a484408585ed39bd2997efb45 348 PANTHER PTHR21225 1 348 6.4E-250 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS10405 0c05645a484408585ed39bd2997efb45 348 PANTHER PTHR21225:SF6 1 348 6.4E-250 T 22-04-2016 LK04_RS10405 0c05645a484408585ed39bd2997efb45 348 Gene3D G3DSA:3.20.20.70 9 347 1.7E-147 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS10405 0c05645a484408585ed39bd2997efb45 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 5.0E-172 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS10405 0c05645a484408585ed39bd2997efb45 348 Pfam PF00793 DAHP synthetase I family 39 337 7.3E-106 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LK04_RS10405 0c05645a484408585ed39bd2997efb45 348 SUPERFAMILY SSF51569 7 347 1.99E-133 T 22-04-2016 LK04_RS15420 ee59a704ce0be6ea7feb7bf96899faf6 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15420 ee59a704ce0be6ea7feb7bf96899faf6 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.711 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15420 ee59a704ce0be6ea7feb7bf96899faf6 360 PANTHER PTHR22926 2 360 6.2E-193 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15420 ee59a704ce0be6ea7feb7bf96899faf6 360 PANTHER PTHR22926:SF5 2 360 6.2E-193 T 22-04-2016 LK04_RS15420 ee59a704ce0be6ea7feb7bf96899faf6 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15420 ee59a704ce0be6ea7feb7bf96899faf6 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15420 ee59a704ce0be6ea7feb7bf96899faf6 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 2.1E-159 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS15420 ee59a704ce0be6ea7feb7bf96899faf6 360 Pfam PF00953 Glycosyl transferase family 4 99 284 3.6E-34 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 Pfam PF02743 Cache domain 44 267 7.3E-20 T 22-04-2016 IPR033479 Double Cache domain 1 LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 Gene3D G3DSA:3.30.450.20 147 282 1.2E-14 T 22-04-2016 LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 SUPERFAMILY SSF103190 187 226 9.81E-5 T 22-04-2016 IPR029151 Periplasmic sensor domain-like LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 Gene3D G3DSA:3.30.70.270 367 520 7.2E-49 T 22-04-2016 LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 514 8.2E-42 T 22-04-2016 IPR000160 GGDEF domain LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 PANTHER PTHR10799 394 514 2.4E-27 T 22-04-2016 LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 PANTHER PTHR10799 1 11 2.4E-27 T 22-04-2016 LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 SUPERFAMILY SSF55073 370 519 2.59E-45 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 364 518 7.4E-45 T 22-04-2016 IPR000160 GGDEF domain LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 SMART SM00267 354 519 1.0E-54 T 22-04-2016 IPR000160 GGDEF domain LK04_RS04400 3a3c5f2d2a5510b97e0778ca55905a9c 530 SUPERFAMILY SSF103190 81 182 2.35E-7 T 22-04-2016 IPR029151 Periplasmic sensor domain-like LK04_RS12545 99db57c7735c2b57f426a1cc2c1f40e6 179 PANTHER PTHR37943 1 176 2.1E-39 T 22-04-2016 LK04_RS12545 99db57c7735c2b57f426a1cc2c1f40e6 179 Gene3D G3DSA:2.60.120.10 10 111 2.0E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS12545 99db57c7735c2b57f426a1cc2c1f40e6 179 PANTHER PTHR37943:SF1 1 176 2.1E-39 T 22-04-2016 LK04_RS12545 99db57c7735c2b57f426a1cc2c1f40e6 179 Pfam PF05962 HutD 12 171 4.9E-46 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves LK04_RS12545 99db57c7735c2b57f426a1cc2c1f40e6 179 SUPERFAMILY SSF51182 2 175 1.96E-45 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS10305 6714a85f1e3831ddea1cfc8d861382eb 214 PANTHER PTHR21098:SF4 1 203 4.4E-124 T 22-04-2016 LK04_RS10305 6714a85f1e3831ddea1cfc8d861382eb 214 SUPERFAMILY SSF63380 1 93 2.47E-27 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LK04_RS10305 6714a85f1e3831ddea1cfc8d861382eb 214 PANTHER PTHR21098 1 203 4.4E-124 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS10305 6714a85f1e3831ddea1cfc8d861382eb 214 SUPERFAMILY SSF63380 94 201 2.38E-31 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LK04_RS10305 6714a85f1e3831ddea1cfc8d861382eb 214 Pfam PF00677 Lumazine binding domain 100 185 4.2E-19 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS10305 6714a85f1e3831ddea1cfc8d861382eb 214 Pfam PF00677 Lumazine binding domain 3 87 1.3E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS10305 6714a85f1e3831ddea1cfc8d861382eb 214 Gene3D G3DSA:2.40.30.20 5 104 3.4E-32 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS10305 6714a85f1e3831ddea1cfc8d861382eb 214 Gene3D G3DSA:2.40.30.20 105 200 1.1E-26 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS10305 6714a85f1e3831ddea1cfc8d861382eb 214 PIRSF PIRSF000498 1 211 5.1E-73 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS10305 6714a85f1e3831ddea1cfc8d861382eb 214 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.8E-82 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS01675 277e5a09907dcb34edd9b544b315c8c8 433 Gene3D G3DSA:1.20.1250.20 220 420 6.2E-19 T 22-04-2016 LK04_RS01675 277e5a09907dcb34edd9b544b315c8c8 433 Pfam PF07690 Major Facilitator Superfamily 16 287 1.9E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS01675 277e5a09907dcb34edd9b544b315c8c8 433 PANTHER PTHR11662 1 429 8.4E-262 T 22-04-2016 LK04_RS01675 277e5a09907dcb34edd9b544b315c8c8 433 SUPERFAMILY SSF103473 3 414 3.14E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS01675 277e5a09907dcb34edd9b544b315c8c8 433 Gene3D G3DSA:1.20.1250.20 7 199 2.4E-44 T 22-04-2016 LK04_RS01675 277e5a09907dcb34edd9b544b315c8c8 433 PANTHER PTHR11662:SF285 1 429 8.4E-262 T 22-04-2016 LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 Pfam PF00999 Sodium/hydrogen exchanger family 15 385 4.2E-55 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 PANTHER PTHR32507 1 575 1.3E-282 T 22-04-2016 LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 Gene3D G3DSA:3.30.465.10 497 570 1.6E-15 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 SUPERFAMILY SSF56176 497 570 1.42E-13 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 Gene3D G3DSA:3.30.70.1450 423 483 3.7E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 48.887 T 22-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 Pfam PF03471 Transporter associated domain 493 570 1.4E-15 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 SMART SM01091 492 572 6.0E-21 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 Pfam PF02080 TrkA-C domain 421 483 1.7E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 SUPERFAMILY SSF116726 419 483 5.23E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS07950 586a931d67ef5cfb5505b8b97e28c224 575 PANTHER PTHR32507:SF7 1 575 1.3E-282 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 LK04_RS18595 831aec5df29ed71da7d62f2feb8fd867 346 PANTHER PTHR10578:SF65 5 314 5.5E-36 T 22-04-2016 LK04_RS18595 831aec5df29ed71da7d62f2feb8fd867 346 Pfam PF01070 FMN-dependent dehydrogenase 8 342 7.9E-60 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 LK04_RS18595 831aec5df29ed71da7d62f2feb8fd867 346 SUPERFAMILY SSF51395 4 340 1.14E-50 T 22-04-2016 LK04_RS18595 831aec5df29ed71da7d62f2feb8fd867 346 PANTHER PTHR10578 5 314 5.5E-36 T 22-04-2016 LK04_RS18595 831aec5df29ed71da7d62f2feb8fd867 346 PIRSF PIRSF000138 2 346 5.0E-51 T 22-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 LK04_RS18595 831aec5df29ed71da7d62f2feb8fd867 346 Gene3D G3DSA:3.20.20.70 5 342 1.3E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 2.0E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 Gene3D G3DSA:1.10.10.10 119 206 4.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 PANTHER PTHR26402 2 203 2.5E-52 T 22-04-2016 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 3.9E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 3.9E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 3.9E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 SMART SM00421 144 201 1.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 SUPERFAMILY SSF46894 134 205 2.11E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 SMART SM00448 2 114 4.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 Gene3D G3DSA:3.40.50.2300 2 118 5.5E-32 T 22-04-2016 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 Pfam PF00072 Response regulator receiver domain 4 114 3.4E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS13535 e87f88c52c15356be7c0e20645eadd78 207 SUPERFAMILY SSF52172 1 130 7.68E-31 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS06620 c83ce7f134d12c4008a3783c0a7b2b25 654 Pfam PF02538 Hydantoinase B/oxoprolinase 7 527 2.8E-129 T 22-04-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 LK04_RS06620 c83ce7f134d12c4008a3783c0a7b2b25 654 PANTHER PTHR11365 1 533 4.4E-48 T 22-04-2016 LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 Gene3D G3DSA:3.40.50.20 2 129 2.0E-55 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 Gene3D G3DSA:3.30.1490.20 137 191 2.3E-32 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 PANTHER PTHR21621 1 313 8.5E-168 T 22-04-2016 LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 3.6E-141 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 SUPERFAMILY SSF56059 123 312 1.3E-61 T 22-04-2016 LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 PANTHER PTHR21621:SF4 1 313 8.5E-168 T 22-04-2016 LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 5.3E-80 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.4E-46 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 181.954 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 Gene3D G3DSA:3.30.470.20 192 298 3.2E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS02735 f5f12140e27ea96759807f41ae7c02a1 314 SUPERFAMILY SSF52440 2 122 6.04E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS19570 2cb1c830e65509b55de2cfc5360d2d13 398 PANTHER PTHR23502:SF32 1 387 1.7E-186 T 22-04-2016 LK04_RS19570 2cb1c830e65509b55de2cfc5360d2d13 398 Pfam PF07690 Major Facilitator Superfamily 17 351 8.3E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS19570 2cb1c830e65509b55de2cfc5360d2d13 398 Gene3D G3DSA:1.20.1250.20 10 189 1.7E-24 T 22-04-2016 LK04_RS19570 2cb1c830e65509b55de2cfc5360d2d13 398 SUPERFAMILY SSF103473 7 388 1.31E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS19570 2cb1c830e65509b55de2cfc5360d2d13 398 PANTHER PTHR23502 1 387 1.7E-186 T 22-04-2016 LK04_RS19570 2cb1c830e65509b55de2cfc5360d2d13 398 Gene3D G3DSA:1.20.1250.20 210 390 3.9E-4 T 22-04-2016 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 SMART SM01005 232 356 1.1E-60 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PANTHER PTHR30511 1 352 2.3E-142 T 22-04-2016 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 TIGRFAM TIGR00492 alr: alanine racemase 6 356 3.2E-127 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 Gene3D G3DSA:2.40.37.10 208 353 1.7E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 5.9E-66 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PRINTS PR00992 Alanine racemase signature 265 280 9.4E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PRINTS PR00992 Alanine racemase signature 121 133 9.4E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PRINTS PR00992 Alanine racemase signature 190 217 9.4E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PRINTS PR00992 Alanine racemase signature 27 43 9.4E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PRINTS PR00992 Alanine racemase signature 286 303 9.4E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PRINTS PR00992 Alanine racemase signature 61 79 9.4E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PRINTS PR00992 Alanine racemase signature 155 166 9.4E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PRINTS PR00992 Alanine racemase signature 248 263 9.4E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PRINTS PR00992 Alanine racemase signature 338 351 9.4E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 SUPERFAMILY SSF50621 227 354 3.28E-44 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 Pfam PF00842 Alanine racemase, C-terminal domain 232 353 2.3E-37 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 Hamap MF_01201 Alanine racemase. 2 356 33.263 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 SUPERFAMILY SSF51419 9 233 2.29E-65 T 22-04-2016 IPR029066 PLP-binding barrel LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 Gene3D G3DSA:3.20.20.10 12 207 2.4E-66 T 22-04-2016 IPR029066 PLP-binding barrel LK04_RS07930 bf2780992f790268ec1077f4a60de5be 356 PANTHER PTHR30511:SF0 1 352 2.3E-142 T 22-04-2016 LK04_RS04950 6b3cb857312c3cb2e8303ca95b1d8373 215 Gene3D G3DSA:1.10.260.40 2 61 2.6E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS04950 6b3cb857312c3cb2e8303ca95b1d8373 215 PANTHER PTHR33516:SF3 21 209 2.6E-21 T 22-04-2016 LK04_RS04950 6b3cb857312c3cb2e8303ca95b1d8373 215 SUPERFAMILY SSF47413 2 61 9.47E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS04950 6b3cb857312c3cb2e8303ca95b1d8373 215 Pfam PF01381 Helix-turn-helix 5 59 6.2E-18 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS04950 6b3cb857312c3cb2e8303ca95b1d8373 215 PANTHER PTHR33516 21 209 2.6E-21 T 22-04-2016 LK04_RS04950 6b3cb857312c3cb2e8303ca95b1d8373 215 Pfam PF00717 Peptidase S24-like 125 200 2.4E-10 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B LK04_RS04950 6b3cb857312c3cb2e8303ca95b1d8373 215 Gene3D G3DSA:2.10.109.10 118 214 1.6E-26 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LK04_RS04950 6b3cb857312c3cb2e8303ca95b1d8373 215 SUPERFAMILY SSF51306 117 214 8.2E-23 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LK04_RS04950 6b3cb857312c3cb2e8303ca95b1d8373 215 SMART SM00530 4 59 8.5E-18 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS00695 e53355cdedf3a4a540cf820ffe807516 392 PANTHER PTHR23514 1 387 7.1E-89 T 22-04-2016 LK04_RS00695 e53355cdedf3a4a540cf820ffe807516 392 Gene3D G3DSA:1.20.1250.20 206 380 8.2E-9 T 22-04-2016 LK04_RS00695 e53355cdedf3a4a540cf820ffe807516 392 SUPERFAMILY SSF103473 3 387 2.22E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS00695 e53355cdedf3a4a540cf820ffe807516 392 Hamap MF_01044 Protein TsgA [tsgA]. 1 388 28.43 T 22-04-2016 IPR023528 Major facilitator superfamily transporter, TsgA LK04_RS00695 e53355cdedf3a4a540cf820ffe807516 392 Gene3D G3DSA:1.20.1250.20 8 188 3.6E-17 T 22-04-2016 LK04_RS00695 e53355cdedf3a4a540cf820ffe807516 392 PANTHER PTHR23514:SF3 1 387 7.1E-89 T 22-04-2016 LK04_RS00695 e53355cdedf3a4a540cf820ffe807516 392 Pfam PF07690 Major Facilitator Superfamily 14 319 9.2E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS06440 ef9de65f2880e7e4985d996462238433 199 PANTHER PTHR11260:SF325 1 194 5.2E-52 T 22-04-2016 LK04_RS06440 ef9de65f2880e7e4985d996462238433 199 Gene3D G3DSA:3.40.30.10 1 81 9.5E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS06440 ef9de65f2880e7e4985d996462238433 199 PANTHER PTHR11260 1 194 5.2E-52 T 22-04-2016 LK04_RS06440 ef9de65f2880e7e4985d996462238433 199 SUPERFAMILY SSF47616 69 196 2.42E-7 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS06440 ef9de65f2880e7e4985d996462238433 199 Gene3D G3DSA:1.20.1050.10 82 195 1.6E-4 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS06440 ef9de65f2880e7e4985d996462238433 199 SUPERFAMILY SSF52833 1 85 1.65E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS06440 ef9de65f2880e7e4985d996462238433 199 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 1.8E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 PANTHER PTHR10520:SF7 3 276 3.0E-137 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 PIRSF PIRSF036480 6 282 2.3E-113 T 22-04-2016 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 Pfam PF01842 ACT domain 10 70 1.0E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 Gene3D G3DSA:3.40.50.170 87 278 1.5E-54 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 282 1.9E-129 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 SUPERFAMILY SSF53328 88 281 6.15E-59 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 SUPERFAMILY SSF55021 8 58 2.79E-8 T 22-04-2016 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 PANTHER PTHR10520 3 276 3.0E-137 T 22-04-2016 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 2.9E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 2.9E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 2.9E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 2.9E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 2.9E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 2.9E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 Gene3D G3DSA:3.30.70.260 4 73 2.7E-12 T 22-04-2016 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 45.606 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LK04_RS08045 f67d9f96fc94784da2f84dcd53f946ac 282 Pfam PF00551 Formyl transferase 88 264 1.8E-51 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LK04_RS11985 31dcd9fea0060067c8b0964b4780897a 396 Pfam PF00155 Aminotransferase class I and II 27 392 2.6E-87 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS11985 31dcd9fea0060067c8b0964b4780897a 396 PANTHER PTHR11879 1 395 6.7E-271 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LK04_RS11985 31dcd9fea0060067c8b0964b4780897a 396 SUPERFAMILY SSF53383 1 396 8.59E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS11985 31dcd9fea0060067c8b0964b4780897a 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LK04_RS11985 31dcd9fea0060067c8b0964b4780897a 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.3E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LK04_RS11985 31dcd9fea0060067c8b0964b4780897a 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.3E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LK04_RS11985 31dcd9fea0060067c8b0964b4780897a 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.3E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LK04_RS11985 31dcd9fea0060067c8b0964b4780897a 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.3E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LK04_RS11985 31dcd9fea0060067c8b0964b4780897a 396 Gene3D G3DSA:3.40.640.10 45 315 1.0E-104 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS11985 31dcd9fea0060067c8b0964b4780897a 396 PANTHER PTHR11879:SF11 1 395 6.7E-271 T 22-04-2016 LK04_RS03830 3516c32bb56cf5b988d13f6d603baef6 105 Gene3D G3DSA:1.20.120.20 11 78 1.6E-4 T 22-04-2016 LK04_RS03830 3516c32bb56cf5b988d13f6d603baef6 105 Pfam PF05957 Bacterial protein of unknown function (DUF883) 12 104 6.9E-27 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB LK04_RS03830 3516c32bb56cf5b988d13f6d603baef6 105 PANTHER PTHR35893 1 105 4.0E-46 T 22-04-2016 LK04_RS03830 3516c32bb56cf5b988d13f6d603baef6 105 PANTHER PTHR35893:SF3 1 105 4.0E-46 T 22-04-2016 LK04_RS02540 15abd0b930f3402334c8abb5b0226152 284 SUPERFAMILY SSF51735 2 255 4.87E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02540 15abd0b930f3402334c8abb5b0226152 284 PANTHER PTHR14194 2 284 8.1E-113 T 22-04-2016 LK04_RS02540 15abd0b930f3402334c8abb5b0226152 284 Gene3D G3DSA:3.40.50.720 2 217 3.1E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02540 15abd0b930f3402334c8abb5b0226152 284 PANTHER PTHR14194:SF73 2 284 8.1E-113 T 22-04-2016 LK04_RS02540 15abd0b930f3402334c8abb5b0226152 284 Pfam PF13460 NAD(P)H-binding 6 183 5.5E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19615 937561577c58eb0039385885b8109e2f 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 4.0E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19615 937561577c58eb0039385885b8109e2f 345 Gene3D G3DSA:1.10.260.40 10 61 8.6E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS19615 937561577c58eb0039385885b8109e2f 345 SUPERFAMILY SSF53822 68 340 6.48E-91 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS19615 937561577c58eb0039385885b8109e2f 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19615 937561577c58eb0039385885b8109e2f 345 Gene3D G3DSA:3.40.50.2300 62 182 9.8E-42 T 22-04-2016 LK04_RS19615 937561577c58eb0039385885b8109e2f 345 SMART SM00354 9 79 5.3E-29 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19615 937561577c58eb0039385885b8109e2f 345 PANTHER PTHR30146 9 338 3.4E-142 T 22-04-2016 LK04_RS19615 937561577c58eb0039385885b8109e2f 345 Gene3D G3DSA:3.40.50.2300 183 316 4.2E-55 T 22-04-2016 LK04_RS19615 937561577c58eb0039385885b8109e2f 345 PANTHER PTHR30146:SF4 9 338 3.4E-142 T 22-04-2016 LK04_RS19615 937561577c58eb0039385885b8109e2f 345 SUPERFAMILY SSF47413 10 67 1.59E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS19615 937561577c58eb0039385885b8109e2f 345 Pfam PF13377 Periplasmic binding protein-like domain 176 337 1.5E-41 T 22-04-2016 LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 Gene3D G3DSA:1.10.10.10 2 86 6.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 PANTHER PTHR30537 1 285 3.7E-66 T 22-04-2016 LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 Gene3D G3DSA:3.40.190.10 170 247 1.6E-18 T 22-04-2016 LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 Pfam PF03466 LysR substrate binding domain 93 277 1.2E-22 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 Gene3D G3DSA:3.40.190.10 98 169 1.5E-12 T 22-04-2016 LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 SUPERFAMILY SSF53850 99 283 1.12E-23 T 22-04-2016 LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 SUPERFAMILY SSF46785 4 84 2.85E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 PANTHER PTHR30537:SF26 1 285 3.7E-66 T 22-04-2016 LK04_RS08605 7e2eca6c7bd996bfc2cf3ab46246ddda 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.6E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS18650 1c31ff1979ed36eb7547b7b19ff77ccd 390 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 380 1.2E-47 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS18650 1c31ff1979ed36eb7547b7b19ff77ccd 390 PANTHER PTHR32196:SF32 236 389 1.5E-157 T 22-04-2016 LK04_RS18650 1c31ff1979ed36eb7547b7b19ff77ccd 390 PANTHER PTHR32196:SF32 18 180 1.5E-157 T 22-04-2016 LK04_RS18650 1c31ff1979ed36eb7547b7b19ff77ccd 390 PANTHER PTHR32196 236 389 1.5E-157 T 22-04-2016 LK04_RS18650 1c31ff1979ed36eb7547b7b19ff77ccd 390 PANTHER PTHR32196 18 180 1.5E-157 T 22-04-2016 LK04_RS14185 0db1a90dcfc61de15eb531e60767c3c3 367 SUPERFAMILY SSF51726 9 367 4.32E-80 T 22-04-2016 LK04_RS14185 0db1a90dcfc61de15eb531e60767c3c3 367 Gene3D G3DSA:3.20.20.210 4 367 1.6E-121 T 22-04-2016 LK04_RS14185 0db1a90dcfc61de15eb531e60767c3c3 367 PANTHER PTHR30519:SF3 6 367 1.2E-191 T 22-04-2016 LK04_RS14185 0db1a90dcfc61de15eb531e60767c3c3 367 PANTHER PTHR30519 6 367 1.2E-191 T 22-04-2016 LK04_RS14185 0db1a90dcfc61de15eb531e60767c3c3 367 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 10 364 5.4E-15 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LK04_RS16055 1f76a7f10c282cba787918999a1561d9 316 Gene3D G3DSA:2.130.10.10 256 308 3.5E-7 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LK04_RS16055 1f76a7f10c282cba787918999a1561d9 316 Gene3D G3DSA:2.130.10.10 7 250 7.8E-25 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LK04_RS16055 1f76a7f10c282cba787918999a1561d9 316 SUPERFAMILY SSF50974 12 302 1.39E-33 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal LK04_RS17920 2e3749db4498c2932e07aca34ae96c86 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 45.955 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 LK04_RS17920 2e3749db4498c2932e07aca34ae96c86 162 Pfam PF02357 Transcription termination factor nusG 3 96 1.4E-20 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LK04_RS17920 2e3749db4498c2932e07aca34ae96c86 162 SMART SM00738 1 100 5.2E-34 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LK04_RS17920 2e3749db4498c2932e07aca34ae96c86 162 Gene3D G3DSA:3.30.70.940 2 98 1.4E-18 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LK04_RS17920 2e3749db4498c2932e07aca34ae96c86 162 SUPERFAMILY SSF82679 2 98 3.66E-28 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LK04_RS17920 2e3749db4498c2932e07aca34ae96c86 162 PANTHER PTHR30265 1 162 5.9E-31 T 22-04-2016 LK04_RS17920 2e3749db4498c2932e07aca34ae96c86 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 1.2E-62 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 LK04_RS17920 2e3749db4498c2932e07aca34ae96c86 162 PANTHER PTHR30265:SF3 1 162 5.9E-31 T 22-04-2016 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 PANTHER PTHR11638 1 854 0.0 T 22-04-2016 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 SUPERFAMILY SSF52540 546 854 1.38E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 Gene3D G3DSA:1.10.1780.10 1 147 2.7E-46 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 SUPERFAMILY SSF52540 159 545 4.27E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 1.0E-28 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 Gene3D G3DSA:3.40.50.300 160 341 6.3E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 SUPERFAMILY SSF81923 4 156 1.29E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 Gene3D G3DSA:1.10.8.60 343 428 1.5E-36 T 22-04-2016 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 Gene3D G3DSA:3.40.50.300 552 777 4.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 SMART SM00382 597 768 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 SMART SM00382 198 343 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 PANTHER PTHR11638:SF18 1 854 0.0 T 22-04-2016 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 SMART SM01086 766 855 3.1E-39 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 7.4E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 5.3E-56 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 Gene3D G3DSA:1.10.8.60 778 855 2.3E-32 T 22-04-2016 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.3E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS03710 d9a8e90f4488152ff4c7102d07be0c46 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.4E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS05505 5bedc5cf21a9be5f5178941a507cc900 171 PANTHER PTHR10371:SF7 13 171 2.0E-114 T 22-04-2016 LK04_RS05505 5bedc5cf21a9be5f5178941a507cc900 171 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 128 146 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 LK04_RS05505 5bedc5cf21a9be5f5178941a507cc900 171 PANTHER PTHR10371 13 171 2.0E-114 T 22-04-2016 LK04_RS05505 5bedc5cf21a9be5f5178941a507cc900 171 PIRSF PIRSF000216 4 171 4.8E-53 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 LK04_RS05505 5bedc5cf21a9be5f5178941a507cc900 171 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 29 171 1.2E-50 T 22-04-2016 LK04_RS05505 5bedc5cf21a9be5f5178941a507cc900 171 SUPERFAMILY SSF52833 20 170 9.84E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05505 5bedc5cf21a9be5f5178941a507cc900 171 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 27 171 9.4E-52 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 LK04_RS05505 5bedc5cf21a9be5f5178941a507cc900 171 Gene3D G3DSA:3.40.30.10 91 169 6.9E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS06810 ccf006859f53ad29c8a7dd3e93559200 255 SUPERFAMILY SSF55486 35 245 3.3E-36 T 22-04-2016 LK04_RS06810 ccf006859f53ad29c8a7dd3e93559200 255 Pfam PF06167 Glucose-regulated metallo-peptidase M90 18 243 9.1E-63 T 22-04-2016 IPR010384 MtfA family LK04_RS06810 ccf006859f53ad29c8a7dd3e93559200 255 Gene3D G3DSA:3.40.390.10 31 244 1.6E-23 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LK04_RS06810 ccf006859f53ad29c8a7dd3e93559200 255 PANTHER PTHR30164 1 250 2.1E-87 T 22-04-2016 LK04_RS00135 81cf7c7d7267c0a13c68c1020a09ca8a 201 Gene3D G3DSA:3.40.50.1820 3 199 3.1E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS00135 81cf7c7d7267c0a13c68c1020a09ca8a 201 Pfam PF02230 Phospholipase/Carboxylesterase 2 198 4.6E-33 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 LK04_RS00135 81cf7c7d7267c0a13c68c1020a09ca8a 201 SUPERFAMILY SSF53474 3 199 1.53E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS00135 81cf7c7d7267c0a13c68c1020a09ca8a 201 PANTHER PTHR10655 2 197 2.0E-33 T 22-04-2016 LK04_RS02425 8aab56e320d3c5ee848b56a8c27f98ea 343 PANTHER PTHR22604 7 329 3.6E-83 T 22-04-2016 LK04_RS02425 8aab56e320d3c5ee848b56a8c27f98ea 343 Gene3D G3DSA:3.40.50.720 6 135 7.3E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02425 8aab56e320d3c5ee848b56a8c27f98ea 343 SUPERFAMILY SSF51735 6 147 1.27E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02425 8aab56e320d3c5ee848b56a8c27f98ea 343 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 113 4.4E-22 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS02425 8aab56e320d3c5ee848b56a8c27f98ea 343 PANTHER PTHR22604:SF92 7 329 3.6E-83 T 22-04-2016 LK04_RS02425 8aab56e320d3c5ee848b56a8c27f98ea 343 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 212 1.4E-4 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS02425 8aab56e320d3c5ee848b56a8c27f98ea 343 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 6 330 3.7E-110 T 22-04-2016 IPR030827 Inositol 2-dehydrogenase LK04_RS02425 8aab56e320d3c5ee848b56a8c27f98ea 343 Gene3D G3DSA:3.30.360.10 136 333 1.3E-45 T 22-04-2016 LK04_RS02425 8aab56e320d3c5ee848b56a8c27f98ea 343 SUPERFAMILY SSF55347 132 268 2.13E-26 T 22-04-2016 LK04_RS13860 d0900f13ff3c2e1143c4115240afb00e 279 PANTHER PTHR30477 1 278 1.2E-62 T 22-04-2016 LK04_RS13860 d0900f13ff3c2e1143c4115240afb00e 279 SUPERFAMILY SSF81345 6 266 2.35E-22 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS13860 d0900f13ff3c2e1143c4115240afb00e 279 PANTHER PTHR30477:SF3 1 278 1.2E-62 T 22-04-2016 LK04_RS13860 d0900f13ff3c2e1143c4115240afb00e 279 Pfam PF00950 ABC 3 transport family 10 268 2.2E-50 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 LK04_RS10670 1e4f3db193a6deffb4ce3c52ea9ffb18 165 Pfam PF01584 CheW-like domain 18 154 1.7E-37 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LK04_RS10670 1e4f3db193a6deffb4ce3c52ea9ffb18 165 PANTHER PTHR22617 4 165 1.5E-57 T 22-04-2016 LK04_RS10670 1e4f3db193a6deffb4ce3c52ea9ffb18 165 Gene3D G3DSA:2.40.50.180 56 92 6.1E-10 T 22-04-2016 LK04_RS10670 1e4f3db193a6deffb4ce3c52ea9ffb18 165 SUPERFAMILY SSF50341 17 156 1.7E-39 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LK04_RS10670 1e4f3db193a6deffb4ce3c52ea9ffb18 165 SMART SM00260 14 151 8.1E-44 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LK04_RS10670 1e4f3db193a6deffb4ce3c52ea9ffb18 165 Gene3D G3DSA:2.30.30.40 93 144 2.5E-8 T 22-04-2016 LK04_RS00305 014ab2395e482b73acb8160d7255fc3c 303 PANTHER PTHR12553 1 150 3.5E-87 T 22-04-2016 LK04_RS00305 014ab2395e482b73acb8160d7255fc3c 303 PANTHER PTHR12553 181 303 3.5E-87 T 22-04-2016 LK04_RS00305 014ab2395e482b73acb8160d7255fc3c 303 Gene3D G3DSA:3.60.15.10 3 303 2.4E-86 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS00305 014ab2395e482b73acb8160d7255fc3c 303 SUPERFAMILY SSF56281 1 303 7.86E-84 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS00305 014ab2395e482b73acb8160d7255fc3c 303 Hamap MF_01818 Ribonuclease BN [rbn]. 1 303 38.905 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 LK04_RS00305 014ab2395e482b73acb8160d7255fc3c 303 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 303 2.3E-105 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 LK04_RS00305 014ab2395e482b73acb8160d7255fc3c 303 Pfam PF12706 Beta-lactamase superfamily domain 200 269 2.2E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS00305 014ab2395e482b73acb8160d7255fc3c 303 Pfam PF12706 Beta-lactamase superfamily domain 34 152 1.0E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS11120 f4444346822b3775c5db4e53b9fbf45c 119 Pfam PF04138 GtrA-like protein 7 115 6.0E-11 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 LK04_RS11120 f4444346822b3775c5db4e53b9fbf45c 119 PANTHER PTHR38459 1 119 2.1E-17 T 22-04-2016 LK04_RS11120 f4444346822b3775c5db4e53b9fbf45c 119 PIRSF PIRSF006298 1 117 1.1E-42 T 22-04-2016 IPR016480 Glucose translocase, bactoprenol-linked LK04_RS11120 f4444346822b3775c5db4e53b9fbf45c 119 PANTHER PTHR38459:SF1 1 119 2.1E-17 T 22-04-2016 LK04_RS15325 1013f2f4b2b393e90b84505434198853 146 SUPERFAMILY SSF54523 7 113 2.98E-22 T 22-04-2016 LK04_RS15325 1013f2f4b2b393e90b84505434198853 146 PANTHER PTHR30093 3 61 2.1E-20 T 22-04-2016 LK04_RS15325 1013f2f4b2b393e90b84505434198853 146 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 2.9E-11 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LK04_RS15325 1013f2f4b2b393e90b84505434198853 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.8E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LK04_RS15325 1013f2f4b2b393e90b84505434198853 146 Gene3D G3DSA:3.30.700.10 7 135 5.0E-33 T 22-04-2016 LK04_RS15325 1013f2f4b2b393e90b84505434198853 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LK04_RS01600 eb0bab7084c3b006b1b166cf2ae23438 131 SUPERFAMILY SSF52980 18 126 3.22E-20 T 22-04-2016 IPR011335 Restriction endonuclease type II-like LK04_RS01600 eb0bab7084c3b006b1b166cf2ae23438 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 23.632 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 LK04_RS01600 eb0bab7084c3b006b1b166cf2ae23438 131 Gene3D G3DSA:3.40.1350.10 24 129 5.8E-37 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 LK04_RS01600 eb0bab7084c3b006b1b166cf2ae23438 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 16 129 1.3E-42 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 LK04_RS01600 eb0bab7084c3b006b1b166cf2ae23438 131 PANTHER PTHR34039 12 131 9.7E-42 T 22-04-2016 LK04_RS01600 eb0bab7084c3b006b1b166cf2ae23438 131 PANTHER PTHR34039:SF1 12 131 9.7E-42 T 22-04-2016 LK04_RS01600 eb0bab7084c3b006b1b166cf2ae23438 131 Pfam PF02021 Uncharacterised protein family UPF0102 24 115 1.8E-27 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 LK04_RS17415 ddfd83d84a25126ce6de9ea60bdce313 331 SMART SM00354 5 75 3.4E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS17415 ddfd83d84a25126ce6de9ea60bdce313 331 SUPERFAMILY SSF47413 5 62 2.9E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS17415 ddfd83d84a25126ce6de9ea60bdce313 331 PANTHER PTHR30146:SF2 4 331 2.7E-168 T 22-04-2016 LK04_RS17415 ddfd83d84a25126ce6de9ea60bdce313 331 Gene3D G3DSA:1.10.260.40 4 60 1.0E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS17415 ddfd83d84a25126ce6de9ea60bdce313 331 PANTHER PTHR30146 4 331 2.7E-168 T 22-04-2016 LK04_RS17415 ddfd83d84a25126ce6de9ea60bdce313 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 5.8E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS17415 ddfd83d84a25126ce6de9ea60bdce313 331 Gene3D G3DSA:3.40.50.2300 62 173 5.9E-37 T 22-04-2016 LK04_RS17415 ddfd83d84a25126ce6de9ea60bdce313 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 316 1.1E-31 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LK04_RS17415 ddfd83d84a25126ce6de9ea60bdce313 331 SUPERFAMILY SSF53822 63 314 3.62E-58 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS17415 ddfd83d84a25126ce6de9ea60bdce313 331 Gene3D G3DSA:3.40.50.2300 174 330 8.4E-46 T 22-04-2016 LK04_RS19045 e580476b53c7a58fe667dca2815adcc1 205 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 203 3.7E-58 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LK04_RS19045 e580476b53c7a58fe667dca2815adcc1 205 Gene3D G3DSA:3.40.50.150 4 204 1.6E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS19045 e580476b53c7a58fe667dca2815adcc1 205 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.419 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LK04_RS19045 e580476b53c7a58fe667dca2815adcc1 205 PANTHER PTHR31760 1 204 4.5E-90 T 22-04-2016 LK04_RS19045 e580476b53c7a58fe667dca2815adcc1 205 PANTHER PTHR31760:SF0 1 204 4.5E-90 T 22-04-2016 LK04_RS19045 e580476b53c7a58fe667dca2815adcc1 205 SUPERFAMILY SSF53335 3 204 1.09E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS19045 e580476b53c7a58fe667dca2815adcc1 205 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 6.8E-64 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LK04_RS19045 e580476b53c7a58fe667dca2815adcc1 205 PIRSF PIRSF003078 1 205 6.6E-65 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LK04_RS16700 dba916ed0928d6bc0f0c8932777d35ab 134 PANTHER PTHR39579 1 134 1.2E-47 T 22-04-2016 LK04_RS16700 dba916ed0928d6bc0f0c8932777d35ab 134 PIRSF PIRSF006318 1 132 2.5E-48 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 LK04_RS16700 dba916ed0928d6bc0f0c8932777d35ab 134 Pfam PF06295 Protein of unknown function (DUF1043) 7 126 4.4E-46 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 SUPERFAMILY SSF52540 1 240 2.04E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 Pfam PF09383 NIL domain 268 339 2.1E-20 T 22-04-2016 IPR018449 NIL domain LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 Gene3D G3DSA:3.30.70.260 238 343 2.1E-32 T 22-04-2016 LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 PANTHER PTHR24220:SF455 3 332 6.9E-189 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 SUPERFAMILY SSF55021 248 343 8.36E-26 T 22-04-2016 LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 Pfam PF00005 ABC transporter 21 169 2.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 PANTHER PTHR24220 3 332 6.9E-189 T 22-04-2016 LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 SMART SM00930 265 340 2.8E-27 T 22-04-2016 IPR018449 NIL domain LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 2.0E-197 T 22-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 SMART SM00382 30 218 3.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS14840 4189d7566ef56398aa4e84bf2e7f2dcd 343 Gene3D G3DSA:3.40.50.300 1 237 4.5E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PANTHER PTHR34501 2 366 1.4E-234 T 22-04-2016 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 318 334 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 235 247 6.1E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 6.1E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 6.1E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 6.1E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 318 335 6.1E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00183 E.coli/Salmonella-type porin signature 241 258 6.5E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 6.5E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 6.5E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.5E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 6.5E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 6.5E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 Gene3D G3DSA:2.40.160.10 22 366 2.5E-99 T 22-04-2016 IPR023614 Porin domain LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 PANTHER PTHR34501:SF1 2 366 1.4E-234 T 22-04-2016 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 Pfam PF00267 Gram-negative porin 27 366 7.2E-132 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 LK04_RS05630 c5becc1e7d252249c7c939f94d1d7c9e 366 SUPERFAMILY SSF56935 22 366 5.49E-78 T 22-04-2016 LK04_RS05770 b3a07e3e8311b053bbe8dc202d1c131a 564 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 110 198 3.3E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS05770 b3a07e3e8311b053bbe8dc202d1c131a 564 PANTHER PTHR30505 13 541 4.4E-266 T 22-04-2016 LK04_RS05770 b3a07e3e8311b053bbe8dc202d1c131a 564 Pfam PF02378 Phosphotransferase system, EIIC 235 498 5.1E-15 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS05770 b3a07e3e8311b053bbe8dc202d1c131a 564 PANTHER PTHR30505:SF0 13 541 4.4E-266 T 22-04-2016 LK04_RS05770 b3a07e3e8311b053bbe8dc202d1c131a 564 Gene3D G3DSA:3.40.50.2300 103 208 4.6E-42 T 22-04-2016 LK04_RS05770 b3a07e3e8311b053bbe8dc202d1c131a 564 Gene3D G3DSA:3.40.50.2300 30 88 2.0E-4 T 22-04-2016 LK04_RS05770 b3a07e3e8311b053bbe8dc202d1c131a 564 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 216 554 8.3E-145 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 LK04_RS05770 b3a07e3e8311b053bbe8dc202d1c131a 564 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 109 192 1.1E-38 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 LK04_RS05770 b3a07e3e8311b053bbe8dc202d1c131a 564 SUPERFAMILY SSF52794 5 87 1.4E-7 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS05770 b3a07e3e8311b053bbe8dc202d1c131a 564 SUPERFAMILY SSF52794 107 208 1.62E-34 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS01995 56b2898de9d27a888b1edc11b7e9b916 275 Gene3D G3DSA:3.60.21.10 14 262 2.2E-36 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS01995 56b2898de9d27a888b1edc11b7e9b916 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 39.936 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 LK04_RS01995 56b2898de9d27a888b1edc11b7e9b916 275 PANTHER PTHR12905:SF7 6 35 1.1E-107 T 22-04-2016 LK04_RS01995 56b2898de9d27a888b1edc11b7e9b916 275 PANTHER PTHR12905 51 275 1.1E-107 T 22-04-2016 LK04_RS01995 56b2898de9d27a888b1edc11b7e9b916 275 PANTHER PTHR12905 6 35 1.1E-107 T 22-04-2016 LK04_RS01995 56b2898de9d27a888b1edc11b7e9b916 275 Pfam PF00149 Calcineurin-like phosphoesterase 15 206 4.3E-17 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LK04_RS01995 56b2898de9d27a888b1edc11b7e9b916 275 SUPERFAMILY SSF56300 15 271 2.92E-57 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS01995 56b2898de9d27a888b1edc11b7e9b916 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 1.0E-20 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 LK04_RS01995 56b2898de9d27a888b1edc11b7e9b916 275 PANTHER PTHR12905:SF7 51 275 1.1E-107 T 22-04-2016 LK04_RS05550 52f0c495728c6f59bb7493891027ab9e 487 PANTHER PTHR22773 1 487 4.2E-197 T 22-04-2016 LK04_RS05550 52f0c495728c6f59bb7493891027ab9e 487 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 477 17.856 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 LK04_RS05550 52f0c495728c6f59bb7493891027ab9e 487 Pfam PF00361 Proton-conducting membrane transporter 122 420 3.3E-84 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 LK04_RS05550 52f0c495728c6f59bb7493891027ab9e 487 PANTHER PTHR22773:SF41 1 487 4.2E-197 T 22-04-2016 LK04_RS05550 52f0c495728c6f59bb7493891027ab9e 487 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 477 1.2E-139 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 LK04_RS17940 e37d85b60b4af6c741288086b76eaa28 81 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 6.9E-22 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 LK04_RS17940 e37d85b60b4af6c741288086b76eaa28 81 PANTHER PTHR33162 1 70 3.8E-24 T 22-04-2016 LK04_RS17940 e37d85b60b4af6c741288086b76eaa28 81 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 24.684 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 LK04_RS17940 e37d85b60b4af6c741288086b76eaa28 81 Pfam PF02416 mttA/Hcf106 family 4 55 1.5E-15 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 LK04_RS14675 ba6014203e0b80e56195e27fdb640bb5 111 Pfam PF00576 HIUase/Transthyretin family 4 110 1.1E-31 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily LK04_RS14675 ba6014203e0b80e56195e27fdb640bb5 111 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 111 7.6E-34 T 22-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 LK04_RS14675 ba6014203e0b80e56195e27fdb640bb5 111 SUPERFAMILY SSF49472 1 111 1.31E-34 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily LK04_RS14675 ba6014203e0b80e56195e27fdb640bb5 111 PANTHER PTHR10395 1 111 1.5E-35 T 22-04-2016 LK04_RS14675 ba6014203e0b80e56195e27fdb640bb5 111 Gene3D G3DSA:2.60.40.180 2 111 1.5E-35 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily LK04_RS14675 ba6014203e0b80e56195e27fdb640bb5 111 PANTHER PTHR10395:SF7 1 111 1.5E-35 T 22-04-2016 LK04_RS14675 ba6014203e0b80e56195e27fdb640bb5 111 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 22-04-2016 IPR023418 Transthyretin, thyroxine binding site LK04_RS14675 ba6014203e0b80e56195e27fdb640bb5 111 PRINTS PR00189 Transthyretin signature 35 60 2.8E-9 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase LK04_RS14675 ba6014203e0b80e56195e27fdb640bb5 111 PRINTS PR00189 Transthyretin signature 89 111 2.8E-9 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase LK04_RS14675 ba6014203e0b80e56195e27fdb640bb5 111 PRINTS PR00189 Transthyretin signature 3 23 2.8E-9 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase LK04_RS06085 2f90500ccb76ba797897c6dd9d696136 344 PANTHER PTHR12526 127 344 3.2E-45 T 22-04-2016 LK04_RS06085 2f90500ccb76ba797897c6dd9d696136 344 Pfam PF00534 Glycosyl transferases group 1 169 325 1.3E-37 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LK04_RS06085 2f90500ccb76ba797897c6dd9d696136 344 SUPERFAMILY SSF53756 3 343 1.37E-58 T 22-04-2016 LK04_RS06085 2f90500ccb76ba797897c6dd9d696136 344 Gene3D G3DSA:3.40.50.2000 173 324 1.1E-26 T 22-04-2016 LK04_RS00495 f29639e6edded9f244714f3d25646983 112 Pfam PF00581 Rhodanese-like domain 13 101 1.4E-13 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS00495 f29639e6edded9f244714f3d25646983 112 SMART SM00450 11 105 2.7E-16 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS00495 f29639e6edded9f244714f3d25646983 112 SUPERFAMILY SSF52821 6 104 1.07E-25 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS00495 f29639e6edded9f244714f3d25646983 112 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 6 109 29.88 T 22-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 LK04_RS00495 f29639e6edded9f244714f3d25646983 112 Gene3D G3DSA:3.40.250.10 6 104 3.5E-27 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS13205 c782bbcc3ffc0a19589e1c7184b8654a 176 SUPERFAMILY SSF52218 4 171 1.54E-52 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS13205 c782bbcc3ffc0a19589e1c7184b8654a 176 Gene3D G3DSA:3.40.50.360 2 168 7.4E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS13205 c782bbcc3ffc0a19589e1c7184b8654a 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 LK04_RS13205 c782bbcc3ffc0a19589e1c7184b8654a 176 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 4.8E-75 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 LK04_RS13205 c782bbcc3ffc0a19589e1c7184b8654a 176 Pfam PF00258 Flavodoxin 6 160 1.1E-30 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LK04_RS13205 c782bbcc3ffc0a19589e1c7184b8654a 176 PANTHER PTHR19384:SF77 141 175 2.3E-110 T 22-04-2016 LK04_RS13205 c782bbcc3ffc0a19589e1c7184b8654a 176 PANTHER PTHR19384:SF77 1 120 2.3E-110 T 22-04-2016 LK04_RS13205 c782bbcc3ffc0a19589e1c7184b8654a 176 PANTHER PTHR19384 141 175 2.3E-110 T 22-04-2016 LK04_RS13205 c782bbcc3ffc0a19589e1c7184b8654a 176 PANTHER PTHR19384 1 120 2.3E-110 T 22-04-2016 LK04_RS13205 c782bbcc3ffc0a19589e1c7184b8654a 176 PIRSF PIRSF038996 1 172 1.9E-69 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 LK04_RS00825 1c38e949037df5b38c74ede34882b303 119 PANTHER PTHR38780 1 119 1.5E-49 T 22-04-2016 LK04_RS00825 1c38e949037df5b38c74ede34882b303 119 Pfam PF02635 DsrE/DsrF-like family 3 119 3.6E-23 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein LK04_RS00825 1c38e949037df5b38c74ede34882b303 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 119 8.0E-44 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF LK04_RS00825 1c38e949037df5b38c74ede34882b303 119 PANTHER PTHR38780:SF1 1 119 1.5E-49 T 22-04-2016 LK04_RS00825 1c38e949037df5b38c74ede34882b303 119 SUPERFAMILY SSF75169 1 119 1.7E-32 T 22-04-2016 IPR027396 DsrEFH-like LK04_RS00825 1c38e949037df5b38c74ede34882b303 119 Gene3D G3DSA:3.40.1260.10 1 119 2.8E-44 T 22-04-2016 IPR027396 DsrEFH-like LK04_RS14015 9dfd2c1f932d5ed0ce6898b6638cb474 204 PANTHER PTHR11403 1 204 9.3E-120 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 LK04_RS14015 9dfd2c1f932d5ed0ce6898b6638cb474 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 5.6E-17 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 LK04_RS14015 9dfd2c1f932d5ed0ce6898b6638cb474 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 4.7E-90 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 LK04_RS14015 9dfd2c1f932d5ed0ce6898b6638cb474 204 Gene3D G3DSA:1.20.120.80 24 202 1.1E-53 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 LK04_RS14015 9dfd2c1f932d5ed0ce6898b6638cb474 204 SUPERFAMILY SSF81452 8 202 3.14E-61 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 LK04_RS14015 9dfd2c1f932d5ed0ce6898b6638cb474 204 PANTHER PTHR11403:SF2 1 204 9.3E-120 T 22-04-2016 LK04_RS03295 b6020f2cf9e8c984cae136d8dc3f1b1f 149 Pfam PF02657 Fe-S metabolism associated domain 21 138 8.2E-38 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 LK04_RS03295 b6020f2cf9e8c984cae136d8dc3f1b1f 149 PANTHER PTHR12735:SF11 8 148 2.4E-51 T 22-04-2016 LK04_RS03295 b6020f2cf9e8c984cae136d8dc3f1b1f 149 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 6 143 3.4E-69 T 22-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE LK04_RS03295 b6020f2cf9e8c984cae136d8dc3f1b1f 149 PANTHER PTHR12735 8 148 2.4E-51 T 22-04-2016 LK04_RS03295 b6020f2cf9e8c984cae136d8dc3f1b1f 149 SUPERFAMILY SSF82649 5 144 5.75E-41 T 22-04-2016 LK04_RS03295 b6020f2cf9e8c984cae136d8dc3f1b1f 149 Gene3D G3DSA:3.90.1010.10 6 146 8.5E-46 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 Pfam PF10135 Rod binding protein 49 95 2.6E-16 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PANTHER PTHR33308:SF3 15 302 3.0E-42 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 158 295 1.3E-20 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PANTHER PTHR33308 15 302 3.0E-42 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 295 312 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 52 72 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 111 136 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 27 50 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 257 276 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 7.7E-105 T 22-04-2016 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 SMART SM00047 137 306 1.1E-50 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LK04_RS11360 9f776e78d320fdc3dcfa966ff9c367df 313 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 294 1.0E-112 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- LK04_RS08395 fef3ecf22a869109ce6ace7e17bc0981 221 PANTHER PTHR31088:SF7 2 217 1.8E-121 T 22-04-2016 LK04_RS08395 fef3ecf22a869109ce6ace7e17bc0981 221 Pfam PF04012 PspA/IM30 family 2 216 7.9E-50 T 22-04-2016 IPR007157 PspA/IM30 LK04_RS08395 fef3ecf22a869109ce6ace7e17bc0981 221 PANTHER PTHR31088 2 217 1.8E-121 T 22-04-2016 LK04_RS08395 fef3ecf22a869109ce6ace7e17bc0981 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 4.7E-93 T 22-04-2016 IPR014319 Phage shock protein, PspA LK04_RS04640 fe5385b1a939262c08c993c0de55cba9 226 PANTHER PTHR26402:SF292 1 226 1.7E-76 T 22-04-2016 LK04_RS04640 fe5385b1a939262c08c993c0de55cba9 226 SMART SM00448 1 111 9.9E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS04640 fe5385b1a939262c08c993c0de55cba9 226 SMART SM00862 149 225 1.2E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS04640 fe5385b1a939262c08c993c0de55cba9 226 Gene3D G3DSA:3.40.50.2300 1 121 1.7E-34 T 22-04-2016 LK04_RS04640 fe5385b1a939262c08c993c0de55cba9 226 SUPERFAMILY SSF52172 1 125 8.11E-37 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS04640 fe5385b1a939262c08c993c0de55cba9 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.9E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS04640 fe5385b1a939262c08c993c0de55cba9 226 PANTHER PTHR26402 1 226 1.7E-76 T 22-04-2016 LK04_RS04640 fe5385b1a939262c08c993c0de55cba9 226 SUPERFAMILY SSF46894 127 225 5.1E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS04640 fe5385b1a939262c08c993c0de55cba9 226 Pfam PF00072 Response regulator receiver domain 3 111 2.2E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS04640 fe5385b1a939262c08c993c0de55cba9 226 Gene3D G3DSA:1.10.10.10 126 225 3.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15810 ada003b69997a61134ce582779de3de6 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 1.5E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 SUPERFAMILY SSF55060 173 289 3.02E-31 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LK04_RS15810 ada003b69997a61134ce582779de3de6 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 306 1.8E-112 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 PANTHER PTHR20861:SF1 1 306 1.1E-129 T 22-04-2016 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 Pfam PF08544 GHMP kinases C terminal 222 281 1.6E-7 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LK04_RS15810 ada003b69997a61134ce582779de3de6 309 Gene3D G3DSA:3.30.70.890 168 298 3.5E-40 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LK04_RS15810 ada003b69997a61134ce582779de3de6 309 PRINTS PR00958 Homoserine kinase signature 137 150 5.7E-33 T 22-04-2016 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 PRINTS PR00958 Homoserine kinase signature 9 24 5.7E-33 T 22-04-2016 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 PRINTS PR00958 Homoserine kinase signature 97 112 5.7E-33 T 22-04-2016 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 PRINTS PR00958 Homoserine kinase signature 254 269 5.7E-33 T 22-04-2016 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 PRINTS PR00958 Homoserine kinase signature 175 192 5.7E-33 T 22-04-2016 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 PANTHER PTHR20861 1 306 1.1E-129 T 22-04-2016 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 Gene3D G3DSA:3.30.230.10 1 163 4.8E-49 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS15810 ada003b69997a61134ce582779de3de6 309 SUPERFAMILY SSF54211 1 160 1.75E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS15810 ada003b69997a61134ce582779de3de6 309 PIRSF PIRSF000676 1 308 8.7E-84 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 LK04_RS15810 ada003b69997a61134ce582779de3de6 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 30.371 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 LK04_RS08415 b11b7af86ec829350ef1a7e9ac83fb26 465 PIRSF PIRSF019381 1 465 1.2E-217 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein LK04_RS08415 b11b7af86ec829350ef1a7e9ac83fb26 465 Pfam PF04317 YcjX-like family, DUF463 20 464 5.0E-191 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein LK04_RS08415 b11b7af86ec829350ef1a7e9ac83fb26 465 PANTHER PTHR38605:SF1 1 465 1.4E-254 T 22-04-2016 LK04_RS08415 b11b7af86ec829350ef1a7e9ac83fb26 465 PANTHER PTHR38605 1 465 1.4E-254 T 22-04-2016 LK04_RS01400 d3cf3f172a03a3fd338de3265d5c60d0 249 SUPERFAMILY SSF53474 13 249 3.3E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS01400 d3cf3f172a03a3fd338de3265d5c60d0 249 Gene3D G3DSA:3.40.50.1820 8 249 1.1E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS01400 d3cf3f172a03a3fd338de3265d5c60d0 249 Pfam PF00326 Prolyl oligopeptidase family 49 236 4.8E-16 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 LK04_RS01400 d3cf3f172a03a3fd338de3265d5c60d0 249 PANTHER PTHR10655 173 203 1.0E-13 T 22-04-2016 LK04_RS01400 d3cf3f172a03a3fd338de3265d5c60d0 249 PANTHER PTHR10655 26 149 1.0E-13 T 22-04-2016 LK04_RS01400 d3cf3f172a03a3fd338de3265d5c60d0 249 PANTHER PTHR10655:SF33 173 203 1.0E-13 T 22-04-2016 LK04_RS01400 d3cf3f172a03a3fd338de3265d5c60d0 249 PANTHER PTHR10655:SF33 26 149 1.0E-13 T 22-04-2016 LK04_RS03635 6f10a6e207979e82444522b200cfd2ef 428 Gene3D G3DSA:3.10.580.10 191 318 1.7E-12 T 22-04-2016 LK04_RS03635 6f10a6e207979e82444522b200cfd2ef 428 Pfam PF01595 Domain of unknown function DUF21 13 182 6.8E-49 T 22-04-2016 IPR002550 Domain of unknown function DUF21 LK04_RS03635 6f10a6e207979e82444522b200cfd2ef 428 Pfam PF00571 CBS domain 278 326 7.7E-5 T 22-04-2016 IPR000644 CBS domain LK04_RS03635 6f10a6e207979e82444522b200cfd2ef 428 SMART SM01091 342 420 8.4E-23 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS03635 6f10a6e207979e82444522b200cfd2ef 428 Pfam PF03471 Transporter associated domain 344 418 9.0E-19 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS03635 6f10a6e207979e82444522b200cfd2ef 428 Gene3D G3DSA:3.30.465.10 319 418 1.4E-25 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS03635 6f10a6e207979e82444522b200cfd2ef 428 SUPERFAMILY SSF56176 340 422 5.73E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS03635 6f10a6e207979e82444522b200cfd2ef 428 PANTHER PTHR22777 1 418 3.8E-150 T 22-04-2016 LK04_RS03635 6f10a6e207979e82444522b200cfd2ef 428 SUPERFAMILY SSF54631 192 329 4.03E-23 T 22-04-2016 LK04_RS09315 4f52d1121c2d17790c78109ff0a73885 439 Gene3D G3DSA:3.20.20.30 1 306 2.8E-117 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS09315 4f52d1121c2d17790c78109ff0a73885 439 Gene3D G3DSA:3.20.20.30 345 433 2.8E-117 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS09315 4f52d1121c2d17790c78109ff0a73885 439 PANTHER PTHR30011:SF18 1 437 7.0E-144 T 22-04-2016 LK04_RS09315 4f52d1121c2d17790c78109ff0a73885 439 PANTHER PTHR30011 1 437 7.0E-144 T 22-04-2016 LK04_RS09315 4f52d1121c2d17790c78109ff0a73885 439 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 426 5.0E-148 T 22-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LK04_RS09315 4f52d1121c2d17790c78109ff0a73885 439 PIRSF PIRSF000337 1 439 5.6E-157 T 22-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LK04_RS09315 4f52d1121c2d17790c78109ff0a73885 439 SUPERFAMILY SSF51679 9 433 4.84E-117 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS09315 4f52d1121c2d17790c78109ff0a73885 439 Pfam PF00296 Luciferase-like monooxygenase 16 380 1.0E-62 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 4.1E-19 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 Gene3D G3DSA:3.40.120.10 226 316 2.1E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 PANTHER PTHR22573:SF52 18 546 1.1E-291 T 22-04-2016 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 PANTHER PTHR22573 18 546 1.1E-291 T 22-04-2016 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 Gene3D G3DSA:3.30.310.50 466 545 2.0E-29 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 SUPERFAMILY SSF53738 209 317 1.41E-9 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 538 3.5E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 SUPERFAMILY SSF53738 26 235 2.35E-51 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 Gene3D G3DSA:3.40.120.10 29 225 4.2E-62 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 1.3E-36 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 SUPERFAMILY SSF53738 305 446 2.59E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 Gene3D G3DSA:3.40.120.10 318 441 6.4E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 5.7E-30 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 LK04_RS13185 b0ad1fa7556096793ef713cb27214640 546 SUPERFAMILY SSF55957 432 544 3.49E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LK04_RS12540 2649cf9cf3c2a7cf000636df34749620 451 Gene3D G3DSA:3.20.20.140 54 393 2.2E-74 T 22-04-2016 LK04_RS12540 2649cf9cf3c2a7cf000636df34749620 451 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 451 8.2E-192 T 22-04-2016 IPR010252 Formiminoglutamate deiminase LK04_RS12540 2649cf9cf3c2a7cf000636df34749620 451 Pfam PF01979 Amidohydrolase family 48 427 3.0E-31 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LK04_RS12540 2649cf9cf3c2a7cf000636df34749620 451 SUPERFAMILY SSF51556 50 372 2.66E-70 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS12540 2649cf9cf3c2a7cf000636df34749620 451 SUPERFAMILY SSF51338 362 447 3.95E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS12540 2649cf9cf3c2a7cf000636df34749620 451 PANTHER PTHR11271:SF4 15 451 1.1E-165 T 22-04-2016 IPR010252 Formiminoglutamate deiminase LK04_RS12540 2649cf9cf3c2a7cf000636df34749620 451 PANTHER PTHR11271 15 451 1.1E-165 T 22-04-2016 LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 PANTHER PTHR11544:SF53 1 69 1.7E-47 T 22-04-2016 LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 PANTHER PTHR11544 1 69 1.7E-47 T 22-04-2016 LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 SMART SM00357 5 69 2.0E-31 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 Gene3D G3DSA:2.40.50.140 4 67 2.4E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 PIRSF PIRSF002599 1 69 7.5E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 SUPERFAMILY SSF50249 3 68 2.91E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 PRINTS PR00050 Cold shock protein signature 27 36 1.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 PRINTS PR00050 Cold shock protein signature 6 21 1.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 PRINTS PR00050 Cold shock protein signature 42 60 1.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS07790 d3955a1c200fae01ec58a71cf83e81b1 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.1E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 SMART SM00434 11 499 3.2E-294 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Gene3D G3DSA:3.30.1360.40 236 333 5.9E-38 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Gene3D G3DSA:1.10.268.10 363 496 1.7E-50 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 5.4E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 689 1.6E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 787 9.9E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 4.3E-14 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 9.0E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 5.9E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 PANTHER PTHR10169:SF48 450 812 0.0 T 22-04-2016 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 PANTHER PTHR10169:SF48 2 414 0.0 T 22-04-2016 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 SUPERFAMILY SSF56719 30 521 2.75E-182 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 4.2E-152 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 SUPERFAMILY SSF101904 533 850 4.05E-112 T 22-04-2016 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 845 30.196 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Gene3D G3DSA:3.90.199.10 34 216 8.1E-84 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 Gene3D G3DSA:2.120.10.90 531 839 7.8E-142 T 22-04-2016 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 PANTHER PTHR10169 450 812 0.0 T 22-04-2016 LK04_RS05605 1cad76daa09fea92c81a9df8c57af70e 878 PANTHER PTHR10169 2 414 0.0 T 22-04-2016 LK04_RS17010 88954e821abf9fe34398af1ae2004a68 411 SUPERFAMILY SSF103473 14 406 3.14E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS17010 88954e821abf9fe34398af1ae2004a68 411 Pfam PF05977 Transmembrane secretion effector 13 406 5.2E-48 T 22-04-2016 IPR010290 Transmembrane secretion effector LK04_RS17010 88954e821abf9fe34398af1ae2004a68 411 PANTHER PTHR23513:SF9 1 409 2.1E-124 T 22-04-2016 LK04_RS17010 88954e821abf9fe34398af1ae2004a68 411 Gene3D G3DSA:1.20.1250.20 232 405 1.2E-9 T 22-04-2016 LK04_RS17010 88954e821abf9fe34398af1ae2004a68 411 Gene3D G3DSA:1.20.1250.20 14 201 8.3E-24 T 22-04-2016 LK04_RS17010 88954e821abf9fe34398af1ae2004a68 411 PANTHER PTHR23513 1 409 2.1E-124 T 22-04-2016 LK04_RS06435 7727aa0400d57146d0f013bb1fda1fe3 340 PANTHER PTHR30137:SF3 1 340 2.0E-225 T 22-04-2016 LK04_RS06435 7727aa0400d57146d0f013bb1fda1fe3 340 Pfam PF00296 Luciferase-like monooxygenase 8 250 1.7E-25 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS06435 7727aa0400d57146d0f013bb1fda1fe3 340 SUPERFAMILY SSF51679 7 333 1.96E-54 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS06435 7727aa0400d57146d0f013bb1fda1fe3 340 PANTHER PTHR30137 1 340 2.0E-225 T 22-04-2016 LK04_RS06435 7727aa0400d57146d0f013bb1fda1fe3 340 Gene3D G3DSA:3.20.20.30 2 340 3.0E-60 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS19875 74cab4be2a91d2aada78646712f28870 321 SUPERFAMILY SSF51604 117 306 2.62E-51 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS19875 74cab4be2a91d2aada78646712f28870 321 PANTHER PTHR13794:SF60 3 321 6.4E-96 T 22-04-2016 LK04_RS19875 74cab4be2a91d2aada78646712f28870 321 SMART SM00922 130 223 1.7E-15 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LK04_RS19875 74cab4be2a91d2aada78646712f28870 321 Gene3D G3DSA:3.20.20.120 118 319 1.3E-58 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS19875 74cab4be2a91d2aada78646712f28870 321 SUPERFAMILY SSF54826 2 109 2.98E-25 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS19875 74cab4be2a91d2aada78646712f28870 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 109 2.0E-8 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LK04_RS19875 74cab4be2a91d2aada78646712f28870 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LK04_RS19875 74cab4be2a91d2aada78646712f28870 321 PANTHER PTHR13794 3 321 6.4E-96 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS19875 74cab4be2a91d2aada78646712f28870 321 Gene3D G3DSA:3.30.390.10 1 100 2.6E-35 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS19875 74cab4be2a91d2aada78646712f28870 321 Pfam PF13378 Enolase C-terminal domain-like 133 298 2.8E-28 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS01755 fbc24e57a1518e6e9f1f1a663ee90908 491 PANTHER PTHR11814:SF123 1 483 4.6E-143 T 22-04-2016 LK04_RS01755 fbc24e57a1518e6e9f1f1a663ee90908 491 Pfam PF00916 Sulfate permease family 6 362 3.0E-53 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 LK04_RS01755 fbc24e57a1518e6e9f1f1a663ee90908 491 PANTHER PTHR11814 1 483 4.6E-143 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 LK04_RS01755 fbc24e57a1518e6e9f1f1a663ee90908 491 SUPERFAMILY SSF52091 414 483 3.14E-5 T 22-04-2016 IPR002645 STAS domain LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 Gene3D G3DSA:1.10.10.60 338 385 2.9E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 Pfam PF12833 Helix-turn-helix domain 309 385 7.9E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 Gene3D G3DSA:3.40.50.2300 49 117 5.2E-5 T 22-04-2016 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 SUPERFAMILY SSF46689 338 385 1.75E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 Gene3D G3DSA:3.40.50.2300 118 251 1.6E-25 T 22-04-2016 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 SUPERFAMILY SSF53822 10 298 4.53E-45 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 9.2E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 9.2E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 Gene3D G3DSA:1.10.10.60 282 336 9.8E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 SMART SM00342 301 384 1.6E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 PANTHER PTHR30146 8 320 3.9E-172 T 22-04-2016 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 PANTHER PTHR30146:SF24 8 320 3.9E-172 T 22-04-2016 LK04_RS18655 6757654129def9f0f6aa65886db9c2a0 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 4.8E-37 T 22-04-2016 LK04_RS17495 6c246cbde7b86f53db60ba685c7dfbaa 128 Pfam PF12568 Acetyltransferase (GNAT) domain 2 126 2.5E-46 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS17495 6c246cbde7b86f53db60ba685c7dfbaa 128 SUPERFAMILY SSF55729 8 120 6.89E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS17495 6c246cbde7b86f53db60ba685c7dfbaa 128 Gene3D G3DSA:3.40.630.30 7 120 2.1E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS17495 6c246cbde7b86f53db60ba685c7dfbaa 128 Hamap MF_02018 PanD maturation factor [panM]. 1 128 33.583 T 22-04-2016 IPR032900 PanD maturation factor PanM GO:0015940|GO:0031638 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 SMART SM00739 127 154 7.9E-7 T 22-04-2016 IPR005824 KOW LK04_RS17800 9ffccab63523e82924effbce41561f70 181 SMART SM00738 6 115 6.1E-50 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 SUPERFAMILY SSF50104 125 180 1.05E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain LK04_RS17800 9ffccab63523e82924effbce41561f70 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.818 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 Pfam PF00467 KOW motif 130 162 4.2E-8 T 22-04-2016 IPR005824 KOW LK04_RS17800 9ffccab63523e82924effbce41561f70 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 2.5E-71 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site LK04_RS17800 9ffccab63523e82924effbce41561f70 181 SUPERFAMILY SSF82679 6 116 3.27E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 Pfam PF02357 Transcription termination factor nusG 7 112 3.9E-28 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 Gene3D G3DSA:3.30.70.940 6 116 2.7E-43 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 Gene3D G3DSA:2.30.30.30 120 180 6.8E-32 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 PANTHER PTHR30265 3 180 3.3E-87 T 22-04-2016 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LK04_RS17800 9ffccab63523e82924effbce41561f70 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 SUPERFAMILY SSF51120 5768 5935 1.15E-8 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 3941 3968 0.035 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 2400 2427 2.6 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 3841 3869 1.1 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 5057 5073 2.2 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 554 583 0.0016 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 1585 1615 2.5 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 3637 3657 1.4 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 3118 3146 2.1 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 1783 1819 0.34 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 1184 1205 0.3 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 1376 1407 0.33 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 4241 4271 0.0059 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 4556 4573 4.3 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 862 888 0.66 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 1076 1101 1.8 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 2920 2938 0.66 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 4453 4474 1.6 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 5157 5177 0.54 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 1688 1716 2.3 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 250 274 0.64 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 4650 4673 1.5 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF12245 Bacterial Ig-like domain (group 3) 767 784 4.5 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 5659 5721 0.0013 T 22-04-2016 IPR010221 VCBS repeat LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 5759 5836 7.8E-5 T 22-04-2016 IPR010221 VCBS repeat LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Pfam PF13750 Bacterial Ig-like domain (group 3) 3217 3348 4.1E-4 T 22-04-2016 IPR022038 Bacterial Ig-like domain LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 5883 5959 7.2E-18 T 22-04-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 1947 2023 9.4E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 2358 2434 5.0E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 2150 2226 2.5E-4 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 1330 1400 6.5E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 2565 2642 2.5E-4 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 1023 1091 2.1E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 2461 2529 1.1E-4 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 4593 4664 1.1E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 715 784 1.8E-4 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 916 998 7.1E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 4293 4362 1.2E-6 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 3990 4060 3.1E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 3174 3250 5.5E-4 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 1537 1615 3.3E-4 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 1229 1305 9.3E-4 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 1636 1716 3.2E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 608 688 1.8E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 2972 3047 1.4E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 4998 5073 3.0E-5 T 22-04-2016 LK04_RS02780 867f076a9e542f3c94e9501041ff7fe4 5967 Gene3D G3DSA:2.60.40.1560 204 274 1.0E-4 T 22-04-2016 LK04_RS18230 ff343b634edd0d2ba02b5609d6129a8f 311 Pfam PF00294 pfkB family carbohydrate kinase 4 307 1.7E-67 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS18230 ff343b634edd0d2ba02b5609d6129a8f 311 PANTHER PTHR10584 1 306 1.5E-163 T 22-04-2016 LK04_RS18230 ff343b634edd0d2ba02b5609d6129a8f 311 Gene3D G3DSA:3.40.1190.20 1 302 9.8E-75 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS18230 ff343b634edd0d2ba02b5609d6129a8f 311 SUPERFAMILY SSF53613 1 304 1.2E-72 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS18230 ff343b634edd0d2ba02b5609d6129a8f 311 PANTHER PTHR10584:SF57 1 306 1.5E-163 T 22-04-2016 LK04_RS18230 ff343b634edd0d2ba02b5609d6129a8f 311 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 259 272 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LK04_RS10075 e42ef90e471a3bf305ca798d2180485d 496 Pfam PF11762 L-arabinose isomerase C-terminal domain 359 472 3.8E-44 T 22-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 LK04_RS10075 e42ef90e471a3bf305ca798d2180485d 496 Pfam PF02610 L-arabinose isomerase 2 355 2.4E-171 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 LK04_RS10075 e42ef90e471a3bf305ca798d2180485d 496 SUPERFAMILY SSF53743 4 321 1.28E-117 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 LK04_RS10075 e42ef90e471a3bf305ca798d2180485d 496 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 2 299 3.0E-119 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 LK04_RS10075 e42ef90e471a3bf305ca798d2180485d 496 PIRSF PIRSF001478 1 496 3.3E-243 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 LK04_RS10075 e42ef90e471a3bf305ca798d2180485d 496 PANTHER PTHR38464:SF1 1 496 3.0E-218 T 22-04-2016 LK04_RS10075 e42ef90e471a3bf305ca798d2180485d 496 Hamap MF_00519 L-arabinose isomerase [araA]. 1 473 61.53 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 LK04_RS10075 e42ef90e471a3bf305ca798d2180485d 496 PANTHER PTHR38464 1 496 3.0E-218 T 22-04-2016 LK04_RS10075 e42ef90e471a3bf305ca798d2180485d 496 SUPERFAMILY SSF50443 325 494 1.67E-68 T 22-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 SUPERFAMILY SSF53850 91 298 9.87E-41 T 22-04-2016 LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 PANTHER PTHR30126 3 300 8.7E-119 T 22-04-2016 LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.2E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 Gene3D G3DSA:3.40.190.10 180 259 2.1E-19 T 22-04-2016 LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 SUPERFAMILY SSF46785 6 112 1.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 Pfam PF03466 LysR substrate binding domain 91 293 8.7E-40 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 Gene3D G3DSA:1.10.10.10 6 84 3.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 Gene3D G3DSA:3.40.190.10 93 179 2.4E-22 T 22-04-2016 LK04_RS14800 aad56d60f4786e1d789e800a7b787989 302 PANTHER PTHR30126:SF15 3 300 8.7E-119 T 22-04-2016 LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 2.6E-12 T 22-04-2016 IPR000361 FeS cluster biogenesis LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 PANTHER PTHR10072 1 97 2.3E-89 T 22-04-2016 LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 PANTHER PTHR10072 147 188 2.3E-89 T 22-04-2016 LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 PANTHER PTHR10072:SF37 1 97 2.3E-89 T 22-04-2016 LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 PANTHER PTHR10072:SF37 147 188 2.3E-89 T 22-04-2016 LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.3E-99 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 SUPERFAMILY SSF89360 1 97 7.65E-21 T 22-04-2016 IPR000361 FeS cluster biogenesis LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 Pfam PF01106 NifU-like domain 111 177 1.2E-19 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 45.863 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 Gene3D G3DSA:2.60.300.12 1 97 3.3E-18 T 22-04-2016 IPR000361 FeS cluster biogenesis LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 SUPERFAMILY SSF117916 95 184 1.7E-24 T 22-04-2016 LK04_RS00525 6de8344177748c9339e38c6bdc829beb 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 2.0E-26 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 LK04_RS01580 ddfeede6f9a01cdd5571fb083a07e9ba 299 PANTHER PTHR30126:SF22 6 298 2.3E-204 T 22-04-2016 LK04_RS01580 ddfeede6f9a01cdd5571fb083a07e9ba 299 Gene3D G3DSA:3.40.190.10 178 261 2.7E-9 T 22-04-2016 LK04_RS01580 ddfeede6f9a01cdd5571fb083a07e9ba 299 Gene3D G3DSA:3.40.190.10 94 177 2.6E-11 T 22-04-2016 LK04_RS01580 ddfeede6f9a01cdd5571fb083a07e9ba 299 Pfam PF03466 LysR substrate binding domain 94 289 1.3E-19 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS01580 ddfeede6f9a01cdd5571fb083a07e9ba 299 SUPERFAMILY SSF53850 93 291 3.26E-24 T 22-04-2016 LK04_RS01580 ddfeede6f9a01cdd5571fb083a07e9ba 299 SUPERFAMILY SSF46785 4 116 8.16E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01580 ddfeede6f9a01cdd5571fb083a07e9ba 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.1E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS01580 ddfeede6f9a01cdd5571fb083a07e9ba 299 Gene3D G3DSA:1.10.10.10 7 92 3.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01580 ddfeede6f9a01cdd5571fb083a07e9ba 299 PANTHER PTHR30126 6 298 2.3E-204 T 22-04-2016 LK04_RS13235 a5e4975fe85ed86def09b4b88091d416 382 Gene3D G3DSA:3.20.20.140 56 336 4.3E-102 T 22-04-2016 LK04_RS13235 a5e4975fe85ed86def09b4b88091d416 382 SUPERFAMILY SSF51556 54 350 2.3E-104 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS13235 a5e4975fe85ed86def09b4b88091d416 382 PANTHER PTHR11113:SF7 1 382 1.0E-173 T 22-04-2016 LK04_RS13235 a5e4975fe85ed86def09b4b88091d416 382 Gene3D G3DSA:3.20.20.140 337 366 5.2E-4 T 22-04-2016 LK04_RS13235 a5e4975fe85ed86def09b4b88091d416 382 Pfam PF01979 Amidohydrolase family 50 377 9.3E-46 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LK04_RS13235 a5e4975fe85ed86def09b4b88091d416 382 PANTHER PTHR11113 1 382 1.0E-173 T 22-04-2016 LK04_RS13235 a5e4975fe85ed86def09b4b88091d416 382 SUPERFAMILY SSF51338 1 53 7.37E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS13235 a5e4975fe85ed86def09b4b88091d416 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 376 4.2E-167 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 LK04_RS13235 a5e4975fe85ed86def09b4b88091d416 382 Gene3D G3DSA:2.30.40.10 2 55 5.2E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS13235 a5e4975fe85ed86def09b4b88091d416 382 PIRSF PIRSF038994 1 382 2.4E-121 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 SUPERFAMILY SSF49503 320 471 3.26E-15 T 22-04-2016 IPR008972 Cupredoxin LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 472 55.441 T 22-04-2016 IPR026589 Cell division protein FtsP GO:0043093 LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 Pfam PF00394 Multicopper oxidase 220 293 3.5E-7 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 Pfam PF07732 Multicopper oxidase 56 170 1.4E-21 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 PANTHER PTHR11709:SF69 55 291 8.8E-154 T 22-04-2016 LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 SUPERFAMILY SSF49503 176 313 2.15E-31 T 22-04-2016 IPR008972 Cupredoxin LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 Gene3D G3DSA:2.60.40.420 36 174 4.0E-18 T 22-04-2016 IPR008972 Cupredoxin LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 SUPERFAMILY SSF49503 37 170 4.58E-20 T 22-04-2016 IPR008972 Cupredoxin LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 Gene3D G3DSA:2.60.40.420 175 291 5.8E-34 T 22-04-2016 IPR008972 Cupredoxin LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 Gene3D G3DSA:2.60.40.420 362 472 4.8E-10 T 22-04-2016 IPR008972 Cupredoxin LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 Pfam PF07731 Multicopper oxidase 363 473 6.7E-10 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 LK04_RS02085 958afbde5f55d262ce7eee815a2e8ba0 475 PANTHER PTHR11709 55 291 8.8E-154 T 22-04-2016 LK04_RS07560 ded3051b32ced4b6a09244c40e17d337 217 PANTHER PTHR35191 1 175 1.2E-58 T 22-04-2016 LK04_RS07560 ded3051b32ced4b6a09244c40e17d337 217 Pfam PF12571 Phage tail-collar fibre protein 1 150 7.6E-64 T 22-04-2016 IPR022225 Phage tail fibre protein LK04_RS05580 0d143c1828364d953d7c0d789541b62b 376 Gene3D G3DSA:1.10.620.20 3 340 1.4E-126 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 LK04_RS05580 0d143c1828364d953d7c0d789541b62b 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 3.7E-49 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LK04_RS05580 0d143c1828364d953d7c0d789541b62b 376 PANTHER PTHR23409:SF23 197 376 5.3E-272 T 22-04-2016 LK04_RS05580 0d143c1828364d953d7c0d789541b62b 376 PANTHER PTHR23409:SF23 1 173 5.3E-272 T 22-04-2016 LK04_RS05580 0d143c1828364d953d7c0d789541b62b 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS05580 0d143c1828364d953d7c0d789541b62b 376 PANTHER PTHR23409 197 376 5.3E-272 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LK04_RS05580 0d143c1828364d953d7c0d789541b62b 376 PANTHER PTHR23409 1 173 5.3E-272 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LK04_RS05580 0d143c1828364d953d7c0d789541b62b 376 SUPERFAMILY SSF47240 3 340 1.58E-114 T 22-04-2016 IPR009078 Ferritin-like superfamily LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 PANTHER PTHR21087 1 170 6.5E-72 T 22-04-2016 LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.277 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 PRINTS PR01100 Shikimate kinase family signature 7 22 4.7E-29 T 22-04-2016 LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 PRINTS PR01100 Shikimate kinase family signature 98 115 4.7E-29 T 22-04-2016 LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 PRINTS PR01100 Shikimate kinase family signature 59 67 4.7E-29 T 22-04-2016 LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 PRINTS PR01100 Shikimate kinase family signature 77 86 4.7E-29 T 22-04-2016 LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 PRINTS PR01100 Shikimate kinase family signature 31 44 4.7E-29 T 22-04-2016 LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 SUPERFAMILY SSF52540 4 170 3.41E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 Gene3D G3DSA:3.40.50.300 2 172 2.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00635 1fd79a77acd78066209f003797aa1972 173 Pfam PF01202 Shikimate kinase 13 170 2.2E-56 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 Pfam PF00106 short chain dehydrogenase 2 187 8.2E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PANTHER PTHR24322:SF392 5 131 9.5E-89 T 22-04-2016 LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PANTHER PTHR24322:SF392 147 179 9.5E-89 T 22-04-2016 LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 Gene3D G3DSA:3.40.50.720 2 232 9.4E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 3.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 3.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PANTHER PTHR24322 5 131 9.5E-89 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 PANTHER PTHR24322 147 179 9.5E-89 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS08775 7347db1a973e0ba27bb8e0dcc046f656 248 SUPERFAMILY SSF51735 3 232 4.16E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07680 276638dc2c9e79762bcaa9e4a7be352f 76 Pfam PF10809 Protein of unknown function (DUF2732) 8 74 8.9E-23 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 LK04_RS07680 276638dc2c9e79762bcaa9e4a7be352f 76 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 8 76 0.01 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 SUPERFAMILY SSF49493 116 140 1.26E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 PRINTS PR00625 DnaJ domain signature 62 81 5.2E-34 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 PRINTS PR00625 DnaJ domain signature 7 25 5.2E-34 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 PRINTS PR00625 DnaJ domain signature 42 62 5.2E-34 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 PRINTS PR00625 DnaJ domain signature 25 40 5.2E-34 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 PANTHER PTHR24078 1 361 1.0E-172 T 22-04-2016 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 SMART SM00271 4 62 3.3E-31 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 Pfam PF00226 DnaJ domain 5 67 1.4E-28 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 SUPERFAMILY SSF46565 2 109 3.53E-36 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 Gene3D G3DSA:2.10.230.10 143 212 1.9E-25 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 SUPERFAMILY SSF57938 136 213 2.09E-23 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 Pfam PF00684 DnaJ central domain 149 209 6.7E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 Gene3D G3DSA:1.10.287.110 1 108 5.6E-38 T 22-04-2016 IPR001623 DnaJ domain LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 Pfam PF01556 DnaJ C terminal domain 123 335 1.2E-44 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 Gene3D G3DSA:2.60.260.20 213 256 3.6E-22 T 22-04-2016 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 Gene3D G3DSA:2.60.260.20 109 142 3.6E-22 T 22-04-2016 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 SUPERFAMILY SSF49493 188 269 1.26E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 SUPERFAMILY SSF49493 261 346 4.19E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.528 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 PANTHER PTHR24078:SF231 1 361 1.0E-172 T 22-04-2016 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 3.5E-142 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 LK04_RS15635 0ab59d049f57c4b18944d852df8324b8 381 Gene3D G3DSA:2.60.260.20 258 335 8.4E-22 T 22-04-2016 LK04_RS19595 b9a91b2f1597382f06137a6cef1c1119 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.217 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 LK04_RS19595 b9a91b2f1597382f06137a6cef1c1119 161 PANTHER PTHR33254:SF7 1 161 5.1E-108 T 22-04-2016 LK04_RS19595 b9a91b2f1597382f06137a6cef1c1119 161 PANTHER PTHR33254 1 161 5.1E-108 T 22-04-2016 LK04_RS19595 b9a91b2f1597382f06137a6cef1c1119 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 4.0E-88 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 LK04_RS19595 b9a91b2f1597382f06137a6cef1c1119 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.9E-62 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 LK04_RS19595 b9a91b2f1597382f06137a6cef1c1119 161 Gene3D G3DSA:3.50.30.40 1 157 7.3E-46 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LK04_RS19595 b9a91b2f1597382f06137a6cef1c1119 161 SUPERFAMILY SSF89562 2 158 9.68E-45 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LK04_RS19595 b9a91b2f1597382f06137a6cef1c1119 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 3.4E-36 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 Gene3D G3DSA:2.40.10.170 2 75 4.9E-30 T 22-04-2016 LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 SUPERFAMILY SSF52540 77 353 3.2E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 SUPERFAMILY SSF47917 350 464 9.68E-55 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 347 5.6E-64 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 SMART SM00382 147 410 1.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 2.8E-19 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 Gene3D G3DSA:1.10.1140.10 350 465 9.3E-57 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 SUPERFAMILY SSF50615 2 75 2.88E-24 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 465 56.737 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 Gene3D G3DSA:3.40.50.300 76 348 1.9E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 338 347 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 PANTHER PTHR15184:SF44 1 465 0.0 T 22-04-2016 LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 465 2.1E-257 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LK04_RS19005 d8f2237894cd0f76a6f614c20350c0a0 465 PANTHER PTHR15184 1 465 0.0 T 22-04-2016 LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 PANTHER PTHR24423 77 348 1.4E-121 T 22-04-2016 LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 SUPERFAMILY SSF47384 121 194 3.53E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 Gene3D G3DSA:1.10.287.130 129 192 4.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 SUPERFAMILY SSF55874 186 349 6.94E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 Gene3D G3DSA:3.30.565.10 211 348 2.2E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.7E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 1.7E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 195 7.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 245 346 6.7E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 PANTHER PTHR24423:SF538 77 348 1.4E-121 T 22-04-2016 LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 Pfam PF00672 HAMP domain 64 131 7.6E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 SMART SM00387 242 351 2.9E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS16470 50f87484b0e184f4422c82efb2d61982 352 SMART SM00388 136 196 1.1E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 Gene3D G3DSA:1.10.3660.10 248 372 5.3E-58 T 22-04-2016 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 Gene3D G3DSA:3.40.50.720 84 247 1.4E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 Pfam PF01817 Chorismate mutase type II 9 86 8.1E-20 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 PANTHER PTHR21363 88 370 2.4E-81 T 22-04-2016 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 SUPERFAMILY SSF51735 91 238 1.93E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 SUPERFAMILY SSF48600 4 88 5.13E-24 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 6.9E-45 T 22-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 Gene3D G3DSA:1.20.59.10 3 83 6.4E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 SMART SM00830 9 89 5.0E-31 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 PIRSF PIRSF001499 1 373 1.1E-180 T 22-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 Pfam PF02153 Prephenate dehydrogenase 137 343 6.9E-31 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 SUPERFAMILY SSF48179 241 366 1.13E-42 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS03680 f363908f3f574ac3ee5d1abc01051510 373 PANTHER PTHR21363:SF0 88 370 2.4E-81 T 22-04-2016 LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 Pfam PF01546 Peptidase family M20/M25/M40 90 451 6.3E-23 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 PANTHER PTHR11014:SF72 288 459 1.3E-94 T 22-04-2016 LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 PANTHER PTHR11014:SF72 14 272 1.3E-94 T 22-04-2016 LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 SUPERFAMILY SSF53187 16 205 2.88E-45 T 22-04-2016 LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 SUPERFAMILY SSF53187 369 455 2.88E-45 T 22-04-2016 LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 Gene3D G3DSA:3.40.630.10 18 215 2.1E-46 T 22-04-2016 LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 Gene3D G3DSA:3.40.630.10 394 456 2.1E-46 T 22-04-2016 LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 PANTHER PTHR11014 288 459 1.3E-94 T 22-04-2016 LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 PANTHER PTHR11014 14 272 1.3E-94 T 22-04-2016 LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 Gene3D G3DSA:3.30.70.360 216 366 5.6E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS08635 609cc92505cad9764ea84d10de2d8ca7 473 Pfam PF07687 Peptidase dimerisation domain 203 354 9.8E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 SUPERFAMILY SSF82693 566 672 3.19E-29 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 Gene3D G3DSA:3.30.70.1430 39 139 1.5E-34 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PANTHER PTHR32063:SF32 1 1036 0.0 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 Gene3D G3DSA:1.10.3850.10 815 1028 5.4E-54 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 Gene3D G3DSA:1.10.3850.10 279 498 1.3E-56 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 SUPERFAMILY SSF82693 274 330 4.71E-24 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 SUPERFAMILY SSF82714 182 272 1.96E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 SUPERFAMILY SSF82866 300 497 5.36E-47 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 SUPERFAMILY SSF82693 39 132 8.55E-27 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 Gene3D G3DSA:3.30.2090.10 723 809 1.1E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 Gene3D G3DSA:3.30.2090.10 181 275 1.5E-25 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 SUPERFAMILY SSF82693 137 182 4.71E-24 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1036 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 SUPERFAMILY SSF82866 807 1030 5.23E-44 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PANTHER PTHR32063 1 1036 0.0 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 Gene3D G3DSA:3.30.70.1430 568 672 1.2E-33 T 22-04-2016 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 5.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 5.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 5.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 5.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 5.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 5.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 5.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 SUPERFAMILY SSF82714 723 809 9.94E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS04470 1837ea37c072958fbbd1f4c43f832177 1038 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS16115 eeab5bef04f0dc7def9450aad53ffbda 337 SUPERFAMILY SSF51197 4 281 8.24E-82 T 22-04-2016 LK04_RS16115 eeab5bef04f0dc7def9450aad53ffbda 337 Gene3D G3DSA:2.60.120.330 3 283 5.6E-88 T 22-04-2016 IPR027443 Isopenicillin N synthase-like LK04_RS16115 eeab5bef04f0dc7def9450aad53ffbda 337 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 176 273 1.3E-18 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 LK04_RS16115 eeab5bef04f0dc7def9450aad53ffbda 337 PANTHER PTHR10209 5 327 6.0E-96 T 22-04-2016 LK04_RS16115 eeab5bef04f0dc7def9450aad53ffbda 337 PANTHER PTHR10209:SF146 5 327 6.0E-96 T 22-04-2016 LK04_RS16115 eeab5bef04f0dc7def9450aad53ffbda 337 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 5 128 1.4E-33 T 22-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain LK04_RS16115 eeab5bef04f0dc7def9450aad53ffbda 337 PRINTS PR00682 Isopenicillin N synthase signature 198 219 1.0E-12 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 LK04_RS16115 eeab5bef04f0dc7def9450aad53ffbda 337 PRINTS PR00682 Isopenicillin N synthase signature 234 260 1.0E-12 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 LK04_RS16115 eeab5bef04f0dc7def9450aad53ffbda 337 PRINTS PR00682 Isopenicillin N synthase signature 27 44 1.0E-12 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 LK04_RS07610 904f698ae31c09f619e351b53bb22e96 170 Gene3D G3DSA:1.10.530.40 29 169 1.3E-49 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 LK04_RS07610 904f698ae31c09f619e351b53bb22e96 170 SUPERFAMILY SSF53955 11 169 1.13E-50 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS07610 904f698ae31c09f619e351b53bb22e96 170 PANTHER PTHR38107:SF1 2 170 6.1E-90 T 22-04-2016 LK04_RS07610 904f698ae31c09f619e351b53bb22e96 170 PANTHER PTHR38107 2 170 6.1E-90 T 22-04-2016 LK04_RS07610 904f698ae31c09f619e351b53bb22e96 170 Pfam PF00959 Phage lysozyme 55 159 9.3E-17 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 LK04_RS10035 4562a31b001d637dd1527e50d50b331d 392 PANTHER PTHR11751 8 386 1.6E-203 T 22-04-2016 LK04_RS10035 4562a31b001d637dd1527e50d50b331d 392 Gene3D G3DSA:3.90.1150.10 242 385 1.0E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS10035 4562a31b001d637dd1527e50d50b331d 392 SUPERFAMILY SSF53383 4 389 5.65E-90 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS10035 4562a31b001d637dd1527e50d50b331d 392 Gene3D G3DSA:3.40.640.10 47 241 1.6E-45 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS10035 4562a31b001d637dd1527e50d50b331d 392 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 7 389 1.1E-111 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 LK04_RS10035 4562a31b001d637dd1527e50d50b331d 392 Pfam PF00155 Aminotransferase class I and II 33 385 2.2E-52 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS10035 4562a31b001d637dd1527e50d50b331d 392 PANTHER PTHR11751:SF361 8 386 1.6E-203 T 22-04-2016 LK04_RS00365 71234d256534418e79da249f9a9b794e 333 SUPERFAMILY SSF46689 226 276 4.93E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00365 71234d256534418e79da249f9a9b794e 333 Pfam PF12833 Helix-turn-helix domain 249 327 1.2E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS00365 71234d256534418e79da249f9a9b794e 333 SUPERFAMILY SSF52317 17 208 1.55E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS00365 71234d256534418e79da249f9a9b794e 333 Gene3D G3DSA:3.40.50.880 19 233 2.5E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS00365 71234d256534418e79da249f9a9b794e 333 PANTHER PTHR11019:SF68 19 333 6.1E-100 T 22-04-2016 LK04_RS00365 71234d256534418e79da249f9a9b794e 333 Gene3D G3DSA:1.10.10.60 282 330 4.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00365 71234d256534418e79da249f9a9b794e 333 Pfam PF01965 DJ-1/PfpI family 19 187 7.1E-14 T 22-04-2016 IPR002818 DJ-1/PfpI LK04_RS00365 71234d256534418e79da249f9a9b794e 333 SMART SM00342 243 326 7.2E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS00365 71234d256534418e79da249f9a9b794e 333 SUPERFAMILY SSF46689 280 330 5.38E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00365 71234d256534418e79da249f9a9b794e 333 Gene3D G3DSA:1.10.10.60 234 280 4.2E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00365 71234d256534418e79da249f9a9b794e 333 PANTHER PTHR11019 19 333 6.1E-100 T 22-04-2016 LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 31 263 8.1E-64 T 22-04-2016 LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 Gene3D G3DSA:3.40.50.720 17 265 5.7E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 158 186 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 SUPERFAMILY SSF51735 21 264 4.72E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 4.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 4.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 4.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PANTHER PTHR24322 171 207 2.6E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PANTHER PTHR24322 26 155 2.6E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 3.4E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 3.4E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 3.4E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 3.4E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 3.4E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS10625 6e9e413f8019c7165d67c0c9d69e00ff 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 3.4E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS05825 845de4983d2f274e98febbb422687756 376 Gene3D G3DSA:1.20.1250.20 202 371 2.5E-7 T 22-04-2016 LK04_RS05825 845de4983d2f274e98febbb422687756 376 PANTHER PTHR23537 3 372 5.0E-55 T 22-04-2016 LK04_RS05825 845de4983d2f274e98febbb422687756 376 SUPERFAMILY SSF103473 5 372 1.01E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05825 845de4983d2f274e98febbb422687756 376 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 13 370 2.7E-87 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB LK04_RS05825 845de4983d2f274e98febbb422687756 376 Gene3D G3DSA:1.20.1250.20 10 187 2.8E-10 T 22-04-2016 LK04_RS05825 845de4983d2f274e98febbb422687756 376 PANTHER PTHR23537:SF1 3 372 5.0E-55 T 22-04-2016 LK04_RS03740 f3e3f56c8c95d229866e3a18c8e6f620 434 ProSitePatterns PS00216 Sugar transport proteins signature 1. 301 318 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS03740 f3e3f56c8c95d229866e3a18c8e6f620 434 PANTHER PTHR23508 18 432 3.8E-281 T 22-04-2016 LK04_RS03740 f3e3f56c8c95d229866e3a18c8e6f620 434 Gene3D G3DSA:1.20.1250.20 245 429 9.6E-19 T 22-04-2016 LK04_RS03740 f3e3f56c8c95d229866e3a18c8e6f620 434 Gene3D G3DSA:1.20.1250.20 25 230 3.2E-26 T 22-04-2016 LK04_RS03740 f3e3f56c8c95d229866e3a18c8e6f620 434 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 31 420 4.1E-144 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 LK04_RS03740 f3e3f56c8c95d229866e3a18c8e6f620 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS03740 f3e3f56c8c95d229866e3a18c8e6f620 434 PANTHER PTHR23508:SF12 18 432 3.8E-281 T 22-04-2016 LK04_RS03740 f3e3f56c8c95d229866e3a18c8e6f620 434 Pfam PF07690 Major Facilitator Superfamily 50 385 4.2E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS03740 f3e3f56c8c95d229866e3a18c8e6f620 434 SUPERFAMILY SSF103473 19 433 1.7E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS03455 7d778474228f96d38c1bdd95dbdfa422 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 3.5E-95 T 22-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 LK04_RS03455 7d778474228f96d38c1bdd95dbdfa422 244 PANTHER PTHR23293:SF5 14 244 1.9E-94 T 22-04-2016 LK04_RS03455 7d778474228f96d38c1bdd95dbdfa422 244 PANTHER PTHR23293 14 244 1.9E-94 T 22-04-2016 LK04_RS03455 7d778474228f96d38c1bdd95dbdfa422 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.449 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 LK04_RS03455 7d778474228f96d38c1bdd95dbdfa422 244 PIRSF PIRSF000857 6 244 4.2E-56 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 LK04_RS03455 7d778474228f96d38c1bdd95dbdfa422 244 Gene3D G3DSA:3.40.50.620 14 216 2.0E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS03455 7d778474228f96d38c1bdd95dbdfa422 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 4.7E-89 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 LK04_RS03455 7d778474228f96d38c1bdd95dbdfa422 244 SUPERFAMILY SSF52402 20 208 1.3E-53 T 22-04-2016 LK04_RS03455 7d778474228f96d38c1bdd95dbdfa422 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 49 219 4.1E-50 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 LK04_RS16120 87a70711a0f80c50c0068a3fcb078b9e 225 PANTHER PTHR33747 1 225 6.2E-102 T 22-04-2016 LK04_RS16120 87a70711a0f80c50c0068a3fcb078b9e 225 Gene3D G3DSA:3.10.450.50 161 225 2.9E-14 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS16120 87a70711a0f80c50c0068a3fcb078b9e 225 SUPERFAMILY SSF101327 10 182 8.37E-23 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 LK04_RS16120 87a70711a0f80c50c0068a3fcb078b9e 225 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 183 1.7E-44 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 LK04_RS16120 87a70711a0f80c50c0068a3fcb078b9e 225 Pfam PF02810 SEC-C motif 207 225 8.9E-11 T 22-04-2016 IPR004027 SEC-C motif LK04_RS16120 87a70711a0f80c50c0068a3fcb078b9e 225 SUPERFAMILY SSF103642 204 224 9.16E-8 T 22-04-2016 LK04_RS16120 87a70711a0f80c50c0068a3fcb078b9e 225 PANTHER PTHR33747:SF2 1 225 6.2E-102 T 22-04-2016 LK04_RS16120 87a70711a0f80c50c0068a3fcb078b9e 225 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 185 4.7E-38 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 LK04_RS10485 a089217207fe082cde4e64ca8b9b4b43 96 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 1 91 8.0E-13 T 22-04-2016 IPR020499 Uncharacterised protein family YdiZ LK04_RS10485 a089217207fe082cde4e64ca8b9b4b43 96 Pfam PF11080 Protein of unknown function (DUF2622) 1 93 2.1E-33 T 22-04-2016 IPR022597 Endoribonuclease GhoS GO:0004521 LK04_RS12555 1ec3aa870fb31148aba620a22f84b2f9 517 Gene3D G3DSA:1.10.275.10 7 201 1.3E-69 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LK04_RS12555 1ec3aa870fb31148aba620a22f84b2f9 517 Pfam PF00221 Aromatic amino acid lyase 16 473 3.6E-182 T 22-04-2016 IPR001106 Aromatic amino acid lyase LK04_RS12555 1ec3aa870fb31148aba620a22f84b2f9 517 Gene3D G3DSA:1.20.200.10 202 507 1.8E-124 T 22-04-2016 LK04_RS12555 1ec3aa870fb31148aba620a22f84b2f9 517 PANTHER PTHR10362:SF7 6 503 3.7E-232 T 22-04-2016 LK04_RS12555 1ec3aa870fb31148aba620a22f84b2f9 517 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 7 507 43.444 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 LK04_RS12555 1ec3aa870fb31148aba620a22f84b2f9 517 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 143 159 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 LK04_RS12555 1ec3aa870fb31148aba620a22f84b2f9 517 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 10 503 5.2E-206 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 LK04_RS12555 1ec3aa870fb31148aba620a22f84b2f9 517 SUPERFAMILY SSF48557 8 504 2.28E-183 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 LK04_RS12555 1ec3aa870fb31148aba620a22f84b2f9 517 PANTHER PTHR10362 6 503 3.7E-232 T 22-04-2016 LK04_RS19610 80ae6abcff64e4d72636265d804b0114 296 PANTHER PTHR11064:SF39 82 294 4.4E-54 T 22-04-2016 LK04_RS19610 80ae6abcff64e4d72636265d804b0114 296 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 291 3.5E-82 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 LK04_RS19610 80ae6abcff64e4d72636265d804b0114 296 Pfam PF05036 Sporulation related domain 224 291 2.9E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS19610 80ae6abcff64e4d72636265d804b0114 296 Gene3D G3DSA:3.30.70.1070 218 293 8.3E-29 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS19610 80ae6abcff64e4d72636265d804b0114 296 Hamap MF_02039 Cell division protein FtsN [ftsN]. 38 295 34.178 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 LK04_RS19610 80ae6abcff64e4d72636265d804b0114 296 PANTHER PTHR11064 82 294 4.4E-54 T 22-04-2016 LK04_RS19610 80ae6abcff64e4d72636265d804b0114 296 SUPERFAMILY SSF110997 224 292 3.92E-18 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 LK04_RS04115 fbc3b6b54ee2c8c79490101f40686f39 378 PANTHER PTHR23522 1 378 7.8E-136 T 22-04-2016 LK04_RS04115 fbc3b6b54ee2c8c79490101f40686f39 378 Gene3D G3DSA:1.20.1250.20 8 183 8.1E-14 T 22-04-2016 LK04_RS04115 fbc3b6b54ee2c8c79490101f40686f39 378 SUPERFAMILY SSF103473 7 373 3.92E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS04115 fbc3b6b54ee2c8c79490101f40686f39 378 Pfam PF12832 MFS_1 like family 8 360 3.6E-45 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain LK04_RS04115 fbc3b6b54ee2c8c79490101f40686f39 378 Gene3D G3DSA:1.20.1250.20 200 373 1.1E-23 T 22-04-2016 LK04_RS04115 fbc3b6b54ee2c8c79490101f40686f39 378 PIRSF PIRSF004925 1 378 1.5E-113 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter LK04_RS04115 fbc3b6b54ee2c8c79490101f40686f39 378 PANTHER PTHR23522:SF3 1 378 7.8E-136 T 22-04-2016 LK04_RS06715 2563b5351d03a5df87a8cefbc23f93cb 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 315 2.3E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS06715 2563b5351d03a5df87a8cefbc23f93cb 327 PANTHER PTHR32196 2 323 2.1E-114 T 22-04-2016 LK04_RS06715 2563b5351d03a5df87a8cefbc23f93cb 327 PANTHER PTHR32196:SF21 2 323 2.1E-114 T 22-04-2016 LK04_RS01990 efc3be56a1ba86cd04ecf2408f8d619f 141 Pfam PF06853 Protein of unknown function (DUF1249) 22 135 9.6E-42 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 LK04_RS01990 efc3be56a1ba86cd04ecf2408f8d619f 141 PANTHER PTHR38774 1 140 2.5E-60 T 22-04-2016 LK04_RS01990 efc3be56a1ba86cd04ecf2408f8d619f 141 PANTHER PTHR38774:SF1 1 140 2.5E-60 T 22-04-2016 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 31 288 1.8E-85 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 Gene3D G3DSA:2.40.230.20 27 288 2.9E-100 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 SUPERFAMILY SSF111364 31 288 1.44E-84 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 1.9E-104 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 1.9E-104 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 27 49 1.9E-104 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 1.9E-104 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 54 78 1.9E-104 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 264 287 1.9E-104 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 1.9E-104 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LK04_RS17050 99acd34da33b8a576ee016584ba8fe1e 288 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 234 253 1.9E-104 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 LK04_RS00415 88882266a214a976321f7db8dddcb613 317 SUPERFAMILY SSF53850 47 253 8.46E-33 T 22-04-2016 LK04_RS00415 88882266a214a976321f7db8dddcb613 317 SMART SM00062 38 244 0.0061 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS00415 88882266a214a976321f7db8dddcb613 317 PANTHER PTHR30024 1 312 5.7E-70 T 22-04-2016 LK04_RS00415 88882266a214a976321f7db8dddcb613 317 PANTHER PTHR30024:SF3 1 312 5.7E-70 T 22-04-2016 LK04_RS00415 88882266a214a976321f7db8dddcb613 317 Gene3D G3DSA:3.40.190.10 110 225 2.5E-19 T 22-04-2016 LK04_RS00415 88882266a214a976321f7db8dddcb613 317 Pfam PF09084 NMT1/THI5 like 73 247 2.0E-11 T 22-04-2016 IPR015168 SsuA/THI5-like LK04_RS03675 28fcc72c2ad0b75f43dc513e8df9c086 359 PANTHER PTHR21225 1 348 7.0E-227 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS03675 28fcc72c2ad0b75f43dc513e8df9c086 359 Gene3D G3DSA:3.20.20.70 10 349 4.8E-153 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS03675 28fcc72c2ad0b75f43dc513e8df9c086 359 PIRSF PIRSF001361 1 354 1.7E-163 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS03675 28fcc72c2ad0b75f43dc513e8df9c086 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 348 4.8E-169 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS03675 28fcc72c2ad0b75f43dc513e8df9c086 359 Pfam PF00793 DAHP synthetase I family 39 340 1.8E-105 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LK04_RS03675 28fcc72c2ad0b75f43dc513e8df9c086 359 SUPERFAMILY SSF51569 8 346 4.81E-136 T 22-04-2016 LK04_RS14100 7b9af3eb6dd3977589d6907615711235 139 Gene3D G3DSA:1.10.940.10 3 137 3.2E-46 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LK04_RS14100 7b9af3eb6dd3977589d6907615711235 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 133 1.1E-45 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 LK04_RS14100 7b9af3eb6dd3977589d6907615711235 139 SUPERFAMILY SSF48013 3 137 1.57E-43 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LK04_RS14100 7b9af3eb6dd3977589d6907615711235 139 PANTHER PTHR11078 1 139 5.7E-58 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 LK04_RS14100 7b9af3eb6dd3977589d6907615711235 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.854 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 LK04_RS14100 7b9af3eb6dd3977589d6907615711235 139 Pfam PF01029 NusB family 7 131 2.1E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 PANTHER PTHR30562 6 608 6.2E-298 T 22-04-2016 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 SUPERFAMILY SSF46600 190 243 1.44E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 2.4E-8 T 22-04-2016 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 Gene3D G3DSA:1.10.150.20 555 609 5.4E-22 T 22-04-2016 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 Gene3D G3DSA:3.40.1440.10 17 97 3.1E-11 T 22-04-2016 IPR027299 GIY-YIG domain LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 589 1.6E-228 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 SMART SM00465 17 98 9.5E-24 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 SMART SM00278 556 575 0.31 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 SMART SM00278 588 607 13.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 Pfam PF02151 UvrB/uvrC motif 204 237 9.9E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 SUPERFAMILY SSF82771 17 100 6.15E-24 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 1.8E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 SUPERFAMILY SSF47781 521 609 3.08E-17 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 PANTHER PTHR30562:SF1 6 608 6.2E-298 T 22-04-2016 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 29.789 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 388 542 1.1E-44 T 22-04-2016 IPR001162 UvrC family homology region LK04_RS11680 f9636fabbf5b2ce8c6bedba4a4b4521b 610 Gene3D G3DSA:4.10.860.10 183 243 5.6E-21 T 22-04-2016 IPR001943 UVR domain GO:0005515 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 Gene3D G3DSA:2.40.50.140 2 64 2.6E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 Pfam PF01330 RuvA N terminal domain 2 62 2.5E-17 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.8E-15 T 22-04-2016 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 SUPERFAMILY SSF50249 2 63 5.6E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 SMART SM00278 73 92 0.081 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 SMART SM00278 108 127 0.046 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 SUPERFAMILY SSF46929 158 202 7.32E-11 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 1.7E-68 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 SUPERFAMILY SSF47781 66 136 2.72E-22 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 PANTHER PTHR33796 2 202 1.6E-81 T 22-04-2016 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 Gene3D G3DSA:1.10.8.10 157 201 1.9E-23 T 22-04-2016 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 Pfam PF07499 RuvA, C-terminal domain 160 202 2.3E-15 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.832 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 LK04_RS07415 fbc3b35448e696fa5ee63249e96746f9 204 Gene3D G3DSA:1.10.150.20 67 138 3.2E-31 T 22-04-2016 LK04_RS02925 548a25d86cb1d37ad3de1a8bc409fb43 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.528 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS02925 548a25d86cb1d37ad3de1a8bc409fb43 219 Gene3D G3DSA:3.40.50.1360 1 136 4.1E-59 T 22-04-2016 LK04_RS02925 548a25d86cb1d37ad3de1a8bc409fb43 219 PANTHER PTHR11934 1 219 1.4E-147 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS02925 548a25d86cb1d37ad3de1a8bc409fb43 219 SUPERFAMILY SSF100950 1 146 3.16E-47 T 22-04-2016 LK04_RS02925 548a25d86cb1d37ad3de1a8bc409fb43 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.1E-58 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS02925 548a25d86cb1d37ad3de1a8bc409fb43 219 Gene3D G3DSA:3.30.70.260 137 196 6.1E-29 T 22-04-2016 LK04_RS02925 548a25d86cb1d37ad3de1a8bc409fb43 219 PANTHER PTHR11934:SF11 1 219 1.4E-147 T 22-04-2016 LK04_RS02925 548a25d86cb1d37ad3de1a8bc409fb43 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.2E-71 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS02925 548a25d86cb1d37ad3de1a8bc409fb43 219 SUPERFAMILY SSF75445 127 198 4.84E-24 T 22-04-2016 LK04_RS00420 3e6b070b8faa323086656888af5325ee 348 Pfam PF01594 Domain of unknown function DUF20 14 328 8.7E-68 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LK04_RS00420 3e6b070b8faa323086656888af5325ee 348 PANTHER PTHR21716:SF17 14 346 1.4E-148 T 22-04-2016 LK04_RS00420 3e6b070b8faa323086656888af5325ee 348 PANTHER PTHR21716 14 346 1.4E-148 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 SUPERFAMILY SSF51735 11 255 3.4E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.4E-46 T 22-04-2016 LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PANTHER PTHR24322 161 193 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PANTHER PTHR24322 15 145 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.0E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 2.0E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.0E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.0E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.0E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.0E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02430 d6288f9d2d3a649b7e11c74a49f69a7b 264 Gene3D G3DSA:3.40.50.720 6 255 8.4E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07195 e86400aae2b4fd4345299c531ab63741 391 PANTHER PTHR10799:SF750 127 375 7.3E-21 T 22-04-2016 LK04_RS07195 e86400aae2b4fd4345299c531ab63741 391 SMART SM00267 205 378 1.5E-42 T 22-04-2016 IPR000160 GGDEF domain LK04_RS07195 e86400aae2b4fd4345299c531ab63741 391 SUPERFAMILY SSF55073 225 378 1.1E-37 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS07195 e86400aae2b4fd4345299c531ab63741 391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 374 6.3E-35 T 22-04-2016 IPR000160 GGDEF domain LK04_RS07195 e86400aae2b4fd4345299c531ab63741 391 PANTHER PTHR10799 127 375 7.3E-21 T 22-04-2016 LK04_RS07195 e86400aae2b4fd4345299c531ab63741 391 Gene3D G3DSA:3.30.70.270 222 379 4.6E-44 T 22-04-2016 LK04_RS07195 e86400aae2b4fd4345299c531ab63741 391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 377 1.5E-37 T 22-04-2016 IPR000160 GGDEF domain LK04_RS14530 659a62d76aaa17a54516f756a24d5b38 581 SUPERFAMILY SSF51126 70 397 1.3E-9 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor LK04_RS14530 659a62d76aaa17a54516f756a24d5b38 581 Gene3D G3DSA:3.30.750.60 77 126 6.3E-6 T 22-04-2016 IPR024429 Endosialidase, N-terminal extension domain LK04_RS09395 ebcd1a1c96d0097460d5b09cade943ff 395 Gene3D G3DSA:3.40.640.10 56 274 9.8E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS09395 ebcd1a1c96d0097460d5b09cade943ff 395 Pfam PF00155 Aminotransferase class I and II 56 389 8.1E-38 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS09395 ebcd1a1c96d0097460d5b09cade943ff 395 PANTHER PTHR11751 13 395 1.7E-107 T 22-04-2016 LK04_RS09395 ebcd1a1c96d0097460d5b09cade943ff 395 SUPERFAMILY SSF53383 4 392 1.95E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS09395 ebcd1a1c96d0097460d5b09cade943ff 395 PANTHER PTHR11751:SF294 13 395 1.7E-107 T 22-04-2016 LK04_RS09395 ebcd1a1c96d0097460d5b09cade943ff 395 Gene3D G3DSA:3.90.1150.10 275 391 2.3E-8 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 241 4.3E-79 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 SMART SM00079 22 243 3.3E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 Gene3D G3DSA:3.40.190.10 109 201 1.2E-25 T 22-04-2016 LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 SMART SM00062 22 243 1.4E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 PANTHER PTHR18966:SF194 23 241 3.1E-100 T 22-04-2016 LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 PANTHER PTHR18966 23 241 3.1E-100 T 22-04-2016 LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 SUPERFAMILY SSF53850 1 242 2.7E-70 T 22-04-2016 LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 Gene3D G3DSA:3.40.190.10 20 108 2.0E-43 T 22-04-2016 LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 Gene3D G3DSA:3.40.190.10 203 242 2.0E-43 T 22-04-2016 LK04_RS12240 0093691af7c02e6833a637ce20693ae0 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 5.3E-68 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS11385 4c20a93e3fd2ce033b11721eb2b47cd9 416 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 398 3.5E-94 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LK04_RS11385 4c20a93e3fd2ce033b11721eb2b47cd9 416 PANTHER PTHR30435 294 416 1.5E-99 T 22-04-2016 LK04_RS11385 4c20a93e3fd2ce033b11721eb2b47cd9 416 PANTHER PTHR30435 1 117 1.5E-99 T 22-04-2016 LK04_RS11385 4c20a93e3fd2ce033b11721eb2b47cd9 416 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site LK04_RS11385 4c20a93e3fd2ce033b11721eb2b47cd9 416 PANTHER PTHR30435:SF1 294 416 1.5E-99 T 22-04-2016 LK04_RS11385 4c20a93e3fd2ce033b11721eb2b47cd9 416 PANTHER PTHR30435:SF1 1 117 1.5E-99 T 22-04-2016 LK04_RS11385 4c20a93e3fd2ce033b11721eb2b47cd9 416 Pfam PF07559 Flagellar basal body protein FlaE 173 297 4.1E-18 T 22-04-2016 IPR011491 Flagellar hook protein FlgE LK04_RS11385 4c20a93e3fd2ce033b11721eb2b47cd9 416 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 338 415 1.8E-21 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LK04_RS11385 4c20a93e3fd2ce033b11721eb2b47cd9 416 SUPERFAMILY SSF117143 73 377 1.96E-76 T 22-04-2016 LK04_RS11385 4c20a93e3fd2ce033b11721eb2b47cd9 416 Pfam PF00460 Flagella basal body rod protein 4 33 6.8E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LK04_RS16050 1b97d0e7fdcb1657dfd997bd311b4e67 184 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 163 2.0E-7 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LK04_RS16050 1b97d0e7fdcb1657dfd997bd311b4e67 184 Gene3D G3DSA:3.40.50.1240 1 168 1.0E-9 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS16050 1b97d0e7fdcb1657dfd997bd311b4e67 184 SUPERFAMILY SSF53254 1 164 1.48E-13 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS17665 9ee4efefa335b267cdb524e65c2392e8 577 PANTHER PTHR39559 1 575 2.6E-204 T 22-04-2016 LK04_RS17665 9ee4efefa335b267cdb524e65c2392e8 577 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 8 565 1.1E-234 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 LK04_RS17665 9ee4efefa335b267cdb524e65c2392e8 577 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 8 572 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 LK04_RS17665 9ee4efefa335b267cdb524e65c2392e8 577 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 569 40.647 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 LK04_RS17665 9ee4efefa335b267cdb524e65c2392e8 577 PIRSF PIRSF000719 1 574 8.2E-252 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 LK04_RS06550 458ab66e3600562796b520899882a51e 222 PANTHER PTHR12725:SF62 7 197 2.0E-16 T 22-04-2016 LK04_RS06550 458ab66e3600562796b520899882a51e 222 SUPERFAMILY SSF56784 5 220 7.27E-37 T 22-04-2016 IPR023214 HAD-like domain LK04_RS06550 458ab66e3600562796b520899882a51e 222 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 7 200 2.3E-47 T 22-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 LK04_RS06550 458ab66e3600562796b520899882a51e 222 PANTHER PTHR12725 7 197 2.0E-16 T 22-04-2016 LK04_RS06550 458ab66e3600562796b520899882a51e 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 9.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS06550 458ab66e3600562796b520899882a51e 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 9.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS06550 458ab66e3600562796b520899882a51e 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 9.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS06550 458ab66e3600562796b520899882a51e 222 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 9 180 4.0E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS06550 458ab66e3600562796b520899882a51e 222 Gene3D G3DSA:3.40.50.1000 5 212 5.6E-23 T 22-04-2016 IPR023214 HAD-like domain LK04_RS06550 458ab66e3600562796b520899882a51e 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 97 189 1.1E-5 T 22-04-2016 IPR023214 HAD-like domain LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 PIRSF PIRSF000370 1 223 2.3E-68 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 4.2E-107 T 22-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 Pfam PF04055 Radical SAM superfamily 27 124 5.9E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 37.475 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 PANTHER PTHR11228 72 222 7.3E-53 T 22-04-2016 LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 PANTHER PTHR11228 1 56 7.3E-53 T 22-04-2016 LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 SUPERFAMILY SSF102114 24 118 1.96E-6 T 22-04-2016 LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 4.5E-11 T 22-04-2016 LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 Gene3D G3DSA:3.20.20.70 28 122 7.4E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 PANTHER PTHR11228:SF6 72 222 7.3E-53 T 22-04-2016 LK04_RS03430 df6e53b424aecf49ad102683c17c6a8c 223 PANTHER PTHR11228:SF6 1 56 7.3E-53 T 22-04-2016 LK04_RS05245 5b9c796704d7e2f83a261327285aa462 427 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 427 3.3E-138 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) LK04_RS05245 5b9c796704d7e2f83a261327285aa462 427 SUPERFAMILY SSF56935 26 427 2.2E-108 T 22-04-2016 LK04_RS05245 5b9c796704d7e2f83a261327285aa462 427 PANTHER PTHR35093:SF3 3 427 1.6E-248 T 22-04-2016 LK04_RS05245 5b9c796704d7e2f83a261327285aa462 427 PANTHER PTHR35093 3 427 1.6E-248 T 22-04-2016 LK04_RS05245 5b9c796704d7e2f83a261327285aa462 427 Gene3D G3DSA:2.40.160.60 26 427 4.8E-139 T 22-04-2016 LK04_RS14635 dd9714423a9294533388f8ec9cb32362 399 PANTHER PTHR34273 1 397 1.5E-123 T 22-04-2016 LK04_RS14635 dd9714423a9294533388f8ec9cb32362 399 Pfam PF01636 Phosphotransferase enzyme family 31 263 7.9E-10 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase LK04_RS14635 dd9714423a9294533388f8ec9cb32362 399 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 396 3.7E-164 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 LK04_RS14635 dd9714423a9294533388f8ec9cb32362 399 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 399 199.777 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 LK04_RS14635 dd9714423a9294533388f8ec9cb32362 399 PANTHER PTHR34273:SF2 1 397 1.5E-123 T 22-04-2016 LK04_RS14635 dd9714423a9294533388f8ec9cb32362 399 SUPERFAMILY SSF56112 1 397 1.08E-88 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS14635 dd9714423a9294533388f8ec9cb32362 399 PIRSF PIRSF031134 1 399 2.1E-157 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 LK04_RS14635 dd9714423a9294533388f8ec9cb32362 399 Gene3D G3DSA:3.90.1200.10 107 272 8.2E-8 T 22-04-2016 LK04_RS01110 45b6665a60169f8b1449fd9c4111fb50 253 PANTHER PTHR24220 15 252 6.9E-172 T 22-04-2016 LK04_RS01110 45b6665a60169f8b1449fd9c4111fb50 253 SMART SM00382 38 225 1.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS01110 45b6665a60169f8b1449fd9c4111fb50 253 Pfam PF00005 ABC transporter 29 177 3.8E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS01110 45b6665a60169f8b1449fd9c4111fb50 253 SUPERFAMILY SSF52540 13 247 3.15E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01110 45b6665a60169f8b1449fd9c4111fb50 253 PANTHER PTHR24220:SF474 15 252 6.9E-172 T 22-04-2016 LK04_RS01110 45b6665a60169f8b1449fd9c4111fb50 253 Gene3D G3DSA:3.40.50.300 12 249 1.5E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01110 45b6665a60169f8b1449fd9c4111fb50 253 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS01110 45b6665a60169f8b1449fd9c4111fb50 253 PIRSF PIRSF039085 10 253 4.9E-108 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS02605 abfac6edb98ae96633ef436671804562 96 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 7 78 1.3E-21 T 22-04-2016 IPR011893 Selenoprotein, Rdx type LK04_RS02605 abfac6edb98ae96633ef436671804562 96 Gene3D G3DSA:3.40.30.10 3 94 1.5E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS02605 abfac6edb98ae96633ef436671804562 96 PANTHER PTHR36417 4 92 3.8E-41 T 22-04-2016 LK04_RS02605 abfac6edb98ae96633ef436671804562 96 PANTHER PTHR36417:SF1 4 92 3.8E-41 T 22-04-2016 LK04_RS02605 abfac6edb98ae96633ef436671804562 96 Pfam PF10262 Rdx family 7 79 2.4E-29 T 22-04-2016 IPR011893 Selenoprotein, Rdx type LK04_RS02605 abfac6edb98ae96633ef436671804562 96 SUPERFAMILY SSF52833 5 88 8.72E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS16815 3fe28cfd8bb25583a9ce989fd1494bb8 328 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 316 5.0E-92 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS16815 3fe28cfd8bb25583a9ce989fd1494bb8 328 PANTHER PTHR18866 159 318 3.3E-18 T 22-04-2016 LK04_RS16815 3fe28cfd8bb25583a9ce989fd1494bb8 328 SMART SM00797 23 311 2.0E-128 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS16815 3fe28cfd8bb25583a9ce989fd1494bb8 328 SUPERFAMILY SSF50891 197 300 6.45E-5 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS16815 3fe28cfd8bb25583a9ce989fd1494bb8 328 PANTHER PTHR18866:SF74 159 318 3.3E-18 T 22-04-2016 LK04_RS16815 3fe28cfd8bb25583a9ce989fd1494bb8 328 Pfam PF02626 Allophanate hydrolase subunit 2 24 293 1.0E-83 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 Pfam PF02203 Tar ligand binding domain homologue 1 173 5.5E-31 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 SUPERFAMILY SSF47170 25 180 3.14E-28 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 PANTHER PTHR32089:SF48 53 518 2.5E-198 T 22-04-2016 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 514 1.3E-66 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 PANTHER PTHR32089 53 518 2.5E-198 T 22-04-2016 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 SMART SM00283 268 515 5.2E-98 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 Gene3D G3DSA:1.20.120.30 35 179 3.3E-28 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 Gene3D G3DSA:1.10.287.950 283 487 2.4E-64 T 22-04-2016 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 Pfam PF00672 HAMP domain 195 264 7.4E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 SUPERFAMILY SSF58104 235 516 1.96E-76 T 22-04-2016 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 293 315 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 SMART SM00304 215 267 3.7E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.1E-84 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 1.1E-84 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 1.1E-84 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 1.1E-84 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.1E-84 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 1.1E-84 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10665 a7d6c6fed6171378a01203cbd38f07f7 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 1.1E-84 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS02120 82caa9eccdb2b217a6f2eb6f890ca08f 440 PANTHER PTHR23508 18 420 1.1E-243 T 22-04-2016 LK04_RS02120 82caa9eccdb2b217a6f2eb6f890ca08f 440 SUPERFAMILY SSF103473 16 426 9.16E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02120 82caa9eccdb2b217a6f2eb6f890ca08f 440 Gene3D G3DSA:1.20.1250.20 241 425 1.6E-21 T 22-04-2016 LK04_RS02120 82caa9eccdb2b217a6f2eb6f890ca08f 440 Gene3D G3DSA:1.20.1250.20 16 221 2.5E-24 T 22-04-2016 LK04_RS02120 82caa9eccdb2b217a6f2eb6f890ca08f 440 Pfam PF07690 Major Facilitator Superfamily 24 374 4.4E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS02120 82caa9eccdb2b217a6f2eb6f890ca08f 440 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS02120 82caa9eccdb2b217a6f2eb6f890ca08f 440 PANTHER PTHR23508:SF14 18 420 1.1E-243 T 22-04-2016 LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 Gene3D G3DSA:3.40.50.270 2 142 2.5E-44 T 22-04-2016 LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 3.1E-27 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 3.1E-27 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 3.1E-27 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 3.1E-27 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 3.1E-27 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 SUPERFAMILY SSF52788 1 142 2.88E-41 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 7.0E-42 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 PANTHER PTHR11717 1 142 2.7E-55 T 22-04-2016 LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 PANTHER PTHR11717:SF20 1 142 2.7E-55 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LK04_RS06065 836b5535b5a91caba8e96c03a95c6d6b 144 SMART SM00226 3 141 1.7E-59 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 240 4.5E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 Gene3D G3DSA:3.40.50.720 1 151 6.0E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 PANTHER PTHR30525 1 401 2.0E-223 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 272 387 1.1E-41 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 SUPERFAMILY SSF51735 3 151 1.3E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 SUPERFAMILY SSF55347 127 275 6.87E-62 T 22-04-2016 LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 PIRSF PIRSF006205 2 399 2.6E-155 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 390 7.6E-175 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 393 46.442 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 SUPERFAMILY SSF69055 303 395 1.31E-31 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 2.0E-47 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS14965 f9916a9e0c47eae72e7a112fa55bab1a 401 Gene3D G3DSA:1.10.1740.10 314 395 2.5E-30 T 22-04-2016 LK04_RS04015 92de1aea90a273e4df749a943afe292b 154 PIRSF PIRSF004923 1 151 3.1E-39 T 22-04-2016 IPR026268 Protein RseC LK04_RS04015 92de1aea90a273e4df749a943afe292b 154 PANTHER PTHR35867:SF1 2 153 2.7E-38 T 22-04-2016 LK04_RS04015 92de1aea90a273e4df749a943afe292b 154 PANTHER PTHR35867 2 153 2.7E-38 T 22-04-2016 LK04_RS04015 92de1aea90a273e4df749a943afe292b 154 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 1.5E-33 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 Gene3D G3DSA:3.40.50.300 3 237 2.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 Gene3D G3DSA:3.40.50.300 266 490 2.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 SUPERFAMILY SSF52540 267 485 5.57E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 PANTHER PTHR24220 8 380 1.5E-188 T 22-04-2016 LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 SUPERFAMILY SSF52540 5 231 8.95E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 Pfam PF00005 ABC transporter 273 425 3.8E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 Pfam PF00005 ABC transporter 22 171 3.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 PANTHER PTHR24220:SF416 8 380 1.5E-188 T 22-04-2016 LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 SMART SM00382 31 218 3.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06710 d695b2b66411fdef77a927fd6189304e 501 SMART SM00382 280 474 3.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 18 464 3.6E-106 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 SUPERFAMILY SSF69279 11 181 4.68E-52 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 Gene3D G3DSA:3.55.50.10 95 185 3.6E-33 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 Pfam PF05954 Phage late control gene D protein (GPD) 23 328 1.1E-79 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 Gene3D G3DSA:2.40.50.230 367 455 6.8E-29 T 22-04-2016 IPR006531 Gp5 N-terminal LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 SUPERFAMILY SSF69255 361 455 1.15E-26 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 SUPERFAMILY SSF69279 185 361 2.55E-30 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 SUPERFAMILY SSF69349 445 470 3.45E-8 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 SUPERFAMILY SSF69349 508 613 3.45E-8 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 PANTHER PTHR32305:SF7 1 523 2.3E-74 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 PANTHER PTHR32305:SF7 685 759 2.3E-74 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 PANTHER PTHR32305 1 523 2.3E-74 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 PANTHER PTHR32305 685 759 2.3E-74 T 22-04-2016 LK04_RS09165 1f93d2af1c784157f3cc3627203f811d 775 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 13 464 1.9E-127 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset LK04_RS00260 ec11921558358814d3becfd55f417af4 300 SUPERFAMILY SSF53850 91 293 4.96E-39 T 22-04-2016 LK04_RS00260 ec11921558358814d3becfd55f417af4 300 PANTHER PTHR30537 1 299 2.0E-107 T 22-04-2016 LK04_RS00260 ec11921558358814d3becfd55f417af4 300 PANTHER PTHR30537:SF28 1 299 2.0E-107 T 22-04-2016 LK04_RS00260 ec11921558358814d3becfd55f417af4 300 Gene3D G3DSA:1.10.10.10 5 90 5.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00260 ec11921558358814d3becfd55f417af4 300 Gene3D G3DSA:3.40.190.10 181 261 2.9E-10 T 22-04-2016 LK04_RS00260 ec11921558358814d3becfd55f417af4 300 Gene3D G3DSA:3.40.190.10 96 180 5.3E-16 T 22-04-2016 LK04_RS00260 ec11921558358814d3becfd55f417af4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00260 ec11921558358814d3becfd55f417af4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00260 ec11921558358814d3becfd55f417af4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00260 ec11921558358814d3becfd55f417af4 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00260 ec11921558358814d3becfd55f417af4 300 SUPERFAMILY SSF46785 5 89 6.49E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00260 ec11921558358814d3becfd55f417af4 300 Pfam PF03466 LysR substrate binding domain 90 293 2.9E-36 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS02655 6f401c9c4606501e6f74b43b42cb1137 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.048 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LK04_RS02655 6f401c9c4606501e6f74b43b42cb1137 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-34 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LK04_RS02655 6f401c9c4606501e6f74b43b42cb1137 90 PANTHER PTHR36965:SF1 2 90 2.6E-54 T 22-04-2016 LK04_RS02655 6f401c9c4606501e6f74b43b42cb1137 90 Gene3D G3DSA:1.10.3880.10 1 90 4.2E-43 T 22-04-2016 LK04_RS02655 6f401c9c4606501e6f74b43b42cb1137 90 PIRSF PIRSF029827 1 90 3.4E-44 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LK04_RS02655 6f401c9c4606501e6f74b43b42cb1137 90 PANTHER PTHR36965 2 90 2.6E-54 T 22-04-2016 LK04_RS02655 6f401c9c4606501e6f74b43b42cb1137 90 SUPERFAMILY SSF111148 1 89 6.54E-40 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LK04_RS02655 6f401c9c4606501e6f74b43b42cb1137 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.7E-40 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LK04_RS06315 7e7af8a30382484a7e2536afae39a8ad 473 PANTHER PTHR11046:SF2 7 473 2.0E-280 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 LK04_RS06315 7e7af8a30382484a7e2536afae39a8ad 473 Gene3D G3DSA:3.30.420.10 5 198 2.8E-81 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS06315 7e7af8a30382484a7e2536afae39a8ad 473 PANTHER PTHR11046 7 473 2.0E-280 T 22-04-2016 LK04_RS06315 7e7af8a30382484a7e2536afae39a8ad 473 SUPERFAMILY SSF53098 7 471 4.45E-139 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS06315 7e7af8a30382484a7e2536afae39a8ad 473 Pfam PF08411 Exonuclease C-terminal 209 469 6.3E-107 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 LK04_RS06315 7e7af8a30382484a7e2536afae39a8ad 473 Pfam PF00929 Exonuclease 10 189 4.9E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LK04_RS06315 7e7af8a30382484a7e2536afae39a8ad 473 SMART SM00479 7 200 8.7E-4 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LK04_RS06315 7e7af8a30382484a7e2536afae39a8ad 473 PIRSF PIRSF000977 2 473 1.2E-203 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 LK04_RS03990 62fbbf92475505065374416ea75fa2a6 249 PANTHER PTHR18895:SF73 38 239 3.0E-71 T 22-04-2016 LK04_RS03990 62fbbf92475505065374416ea75fa2a6 249 Gene3D G3DSA:3.40.50.150 36 240 2.1E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS03990 62fbbf92475505065374416ea75fa2a6 249 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 123 129 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS03990 62fbbf92475505065374416ea75fa2a6 249 Pfam PF05175 Methyltransferase small domain 49 139 3.0E-16 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LK04_RS03990 62fbbf92475505065374416ea75fa2a6 249 SUPERFAMILY SSF53335 16 196 2.39E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS03990 62fbbf92475505065374416ea75fa2a6 249 PANTHER PTHR18895 38 239 3.0E-71 T 22-04-2016 LK04_RS03990 62fbbf92475505065374416ea75fa2a6 249 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 15 249 51.684 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 LK04_RS14085 625d9cb1b157e43222517c412fae1529 324 PANTHER PTHR11732:SF150 237 324 2.8E-133 T 22-04-2016 LK04_RS14085 625d9cb1b157e43222517c412fae1529 324 PANTHER PTHR11732:SF150 1 217 2.8E-133 T 22-04-2016 LK04_RS14085 625d9cb1b157e43222517c412fae1529 324 PANTHER PTHR11732 237 324 2.8E-133 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS14085 625d9cb1b157e43222517c412fae1529 324 PANTHER PTHR11732 1 217 2.8E-133 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS14085 625d9cb1b157e43222517c412fae1529 324 PRINTS PR00069 Aldo-keto reductase signature 142 159 6.2E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS14085 625d9cb1b157e43222517c412fae1529 324 PRINTS PR00069 Aldo-keto reductase signature 111 129 6.2E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS14085 625d9cb1b157e43222517c412fae1529 324 PRINTS PR00069 Aldo-keto reductase signature 47 71 6.2E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS14085 625d9cb1b157e43222517c412fae1529 324 Pfam PF00248 Aldo/keto reductase family 15 314 7.1E-77 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS14085 625d9cb1b157e43222517c412fae1529 324 Gene3D G3DSA:3.20.20.100 9 322 1.2E-107 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS14085 625d9cb1b157e43222517c412fae1529 324 SUPERFAMILY SSF51430 1 321 1.7E-101 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS11490 0a99b2aa37b448ff43a5f2dc7efbbcbd 351 SUPERFAMILY SSF52821 116 271 3.67E-31 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS11490 0a99b2aa37b448ff43a5f2dc7efbbcbd 351 Pfam PF12368 Rhodanase C-terminal 245 307 2.8E-19 T 22-04-2016 IPR022111 Rhodanase, C-terminal LK04_RS11490 0a99b2aa37b448ff43a5f2dc7efbbcbd 351 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 39.143 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 LK04_RS11490 0a99b2aa37b448ff43a5f2dc7efbbcbd 351 Pfam PF00581 Rhodanese-like domain 138 232 1.6E-12 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS11490 0a99b2aa37b448ff43a5f2dc7efbbcbd 351 SMART SM00450 136 237 5.2E-24 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS11490 0a99b2aa37b448ff43a5f2dc7efbbcbd 351 PANTHER PTHR22778:SF21 1 322 2.3E-116 T 22-04-2016 LK04_RS11490 0a99b2aa37b448ff43a5f2dc7efbbcbd 351 PANTHER PTHR22778 1 322 2.3E-116 T 22-04-2016 LK04_RS11490 0a99b2aa37b448ff43a5f2dc7efbbcbd 351 Gene3D G3DSA:3.40.250.10 117 251 2.3E-36 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04090 abece76fd62676ad43c046da5aef2ba3 218 Pfam PF13942 YfhG lipoprotein 34 203 3.3E-72 T 22-04-2016 IPR025262 Quorum-sensing regulator protein G LK04_RS04090 abece76fd62676ad43c046da5aef2ba3 218 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 11 199 2.0E-36 T 22-04-2016 LK04_RS07575 a1eb48ef50fa34b73fdf2149ed80927e 116 SUPERFAMILY SSF160719 14 115 4.18E-29 T 22-04-2016 LK04_RS07575 a1eb48ef50fa34b73fdf2149ed80927e 116 Pfam PF04965 Gene 25-like lysozyme 21 95 4.6E-15 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD LK04_RS07575 a1eb48ef50fa34b73fdf2149ed80927e 116 Gene3D G3DSA:3.10.450.40 11 115 3.2E-37 T 22-04-2016 LK04_RS07575 a1eb48ef50fa34b73fdf2149ed80927e 116 PANTHER PTHR35862:SF2 5 114 3.2E-34 T 22-04-2016 LK04_RS07575 a1eb48ef50fa34b73fdf2149ed80927e 116 PANTHER PTHR35862 5 114 3.2E-34 T 22-04-2016 LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 SUPERFAMILY SSF55681 5 320 1.75E-105 T 22-04-2016 LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 34.009 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 Gene3D G3DSA:3.40.50.800 329 422 1.9E-30 T 22-04-2016 IPR004154 Anticodon-binding LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 Gene3D G3DSA:3.30.930.10 4 185 4.0E-100 T 22-04-2016 LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 Gene3D G3DSA:3.30.930.10 221 320 4.0E-100 T 22-04-2016 LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 PANTHER PTHR11476 2 426 1.2E-237 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 Pfam PF13393 Histidyl-tRNA synthetase 10 312 2.2E-47 T 22-04-2016 LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 1.6E-157 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 SUPERFAMILY SSF52954 329 423 1.06E-24 T 22-04-2016 IPR004154 Anticodon-binding LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 PANTHER PTHR11476:SF9 2 426 1.2E-237 T 22-04-2016 LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 PIRSF PIRSF001549 2 423 2.3E-129 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 LK04_RS04205 b608291c749f175c7709c4ecde5162af 426 Pfam PF03129 Anticodon binding domain 330 420 5.8E-13 T 22-04-2016 IPR004154 Anticodon-binding LK04_RS06105 cbc2fcf6138eec622e7830419fc6d936 446 PANTHER PTHR30250:SF3 8 438 1.3E-52 T 22-04-2016 LK04_RS06105 cbc2fcf6138eec622e7830419fc6d936 446 Pfam PF13440 Polysaccharide biosynthesis protein 28 320 2.7E-55 T 22-04-2016 LK04_RS06105 cbc2fcf6138eec622e7830419fc6d936 446 PANTHER PTHR30250 8 438 1.3E-52 T 22-04-2016 LK04_RS08750 d755bf79a5d7a9cddb68eab5f1eb6209 238 PANTHER PTHR30151:SF23 36 234 1.9E-71 T 22-04-2016 LK04_RS08750 d755bf79a5d7a9cddb68eab5f1eb6209 238 Gene3D G3DSA:1.10.3720.10 36 225 6.3E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08750 d755bf79a5d7a9cddb68eab5f1eb6209 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 234 4.9E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08750 d755bf79a5d7a9cddb68eab5f1eb6209 238 PANTHER PTHR30151 36 234 1.9E-71 T 22-04-2016 LK04_RS08750 d755bf79a5d7a9cddb68eab5f1eb6209 238 SUPERFAMILY SSF161098 40 225 1.83E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19575 667e7b9b123eab1a2df1b76a1d1cd118 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 7.9E-132 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 LK04_RS19575 667e7b9b123eab1a2df1b76a1d1cd118 336 PIRSF PIRSF004532 1 333 1.0E-138 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 LK04_RS19575 667e7b9b123eab1a2df1b76a1d1cd118 336 PANTHER PTHR30447 1 336 1.2E-181 T 22-04-2016 LK04_RS19575 667e7b9b123eab1a2df1b76a1d1cd118 336 PANTHER PTHR30447:SF0 1 336 1.2E-181 T 22-04-2016 LK04_RS19575 667e7b9b123eab1a2df1b76a1d1cd118 336 Gene3D G3DSA:3.30.540.10 172 329 9.3E-47 T 22-04-2016 LK04_RS19575 667e7b9b123eab1a2df1b76a1d1cd118 336 Gene3D G3DSA:3.30.540.10 1 171 2.3E-69 T 22-04-2016 LK04_RS19575 667e7b9b123eab1a2df1b76a1d1cd118 336 SUPERFAMILY SSF56655 1 325 2.81E-111 T 22-04-2016 LK04_RS19575 667e7b9b123eab1a2df1b76a1d1cd118 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 328 2.9E-177 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 LK04_RS06580 5fedf630c907f6aa55ee837ee292d2b9 443 SUPERFAMILY SSF51905 18 231 1.47E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06580 5fedf630c907f6aa55ee837ee292d2b9 443 SUPERFAMILY SSF51905 374 431 1.47E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06580 5fedf630c907f6aa55ee837ee292d2b9 443 Pfam PF01266 FAD dependent oxidoreductase 19 413 5.0E-60 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LK04_RS06580 5fedf630c907f6aa55ee837ee292d2b9 443 Gene3D G3DSA:3.50.50.60 374 431 6.9E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06580 5fedf630c907f6aa55ee837ee292d2b9 443 Gene3D G3DSA:3.50.50.60 9 94 6.9E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06580 5fedf630c907f6aa55ee837ee292d2b9 443 Gene3D G3DSA:3.50.50.60 152 230 6.9E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06580 5fedf630c907f6aa55ee837ee292d2b9 443 Gene3D G3DSA:3.30.9.10 231 373 2.1E-9 T 22-04-2016 LK04_RS06580 5fedf630c907f6aa55ee837ee292d2b9 443 Gene3D G3DSA:3.30.9.10 100 151 2.1E-9 T 22-04-2016 LK04_RS06580 5fedf630c907f6aa55ee837ee292d2b9 443 PANTHER PTHR13847 1 261 8.6E-61 T 22-04-2016 LK04_RS06580 5fedf630c907f6aa55ee837ee292d2b9 443 PANTHER PTHR13847 301 433 8.6E-61 T 22-04-2016 LK04_RS08080 6147c1798c9d78237a452c3574074147 135 Gene3D G3DSA:1.10.287.1050 1 58 1.2E-31 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 LK04_RS08080 6147c1798c9d78237a452c3574074147 135 PIRSF PIRSF002096 1 135 3.2E-56 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 LK04_RS08080 6147c1798c9d78237a452c3574074147 135 SMART SM00528 87 135 7.9E-23 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 LK04_RS08080 6147c1798c9d78237a452c3574074147 135 Gene3D G3DSA:4.10.430.10 92 135 4.2E-24 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 LK04_RS08080 6147c1798c9d78237a452c3574074147 135 PANTHER PTHR38097:SF1 2 135 7.8E-92 T 22-04-2016 LK04_RS08080 6147c1798c9d78237a452c3574074147 135 Pfam PF00816 H-NS histone family 32 127 3.9E-20 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 LK04_RS08080 6147c1798c9d78237a452c3574074147 135 SUPERFAMILY SSF81273 2 58 1.28E-18 T 22-04-2016 LK04_RS08080 6147c1798c9d78237a452c3574074147 135 PANTHER PTHR38097 2 135 7.8E-92 T 22-04-2016 LK04_RS08080 6147c1798c9d78237a452c3574074147 135 SUPERFAMILY SSF81273 93 135 1.88E-11 T 22-04-2016 LK04_RS09540 533697a976ba071a21d8412854302a06 772 PANTHER PTHR11851 4 217 2.9E-34 T 22-04-2016 LK04_RS09540 533697a976ba071a21d8412854302a06 772 PANTHER PTHR11851:SF69 4 217 2.9E-34 T 22-04-2016 LK04_RS09540 533697a976ba071a21d8412854302a06 772 Pfam PF00675 Insulinase (Peptidase family M16) 16 133 1.2E-31 T 22-04-2016 IPR011765 Peptidase M16, N-terminal LK04_RS09540 533697a976ba071a21d8412854302a06 772 Gene3D G3DSA:3.30.830.10 4 218 3.0E-40 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LK04_RS09540 533697a976ba071a21d8412854302a06 772 SUPERFAMILY SSF63411 4 206 7.33E-34 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LK04_RS09540 533697a976ba071a21d8412854302a06 772 Gene3D G3DSA:3.30.830.10 610 769 1.9E-19 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LK04_RS09540 533697a976ba071a21d8412854302a06 772 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 34 57 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 LK04_RS09540 533697a976ba071a21d8412854302a06 772 SUPERFAMILY SSF63411 602 769 2.44E-18 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LK04_RS09540 533697a976ba071a21d8412854302a06 772 TIGRFAM TIGR02110 PQQ_syn_pqqF: coenzyme PQQ biosynthesis protein PqqF 4 691 4.7E-222 T 22-04-2016 IPR011844 Coenzyme PQQ biosynthesis protein PqqF GO:0004222|GO:0006508|GO:0008270|GO:0018189 UniPathway: UPA00539 LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 SUPERFAMILY SSF52821 260 352 3.67E-22 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 Gene3D G3DSA:3.40.250.10 264 352 8.7E-17 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 PANTHER PTHR12231:SF83 256 352 3.8E-47 T 22-04-2016 LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 PANTHER PTHR12231:SF83 23 32 3.8E-47 T 22-04-2016 LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 Pfam PF00581 Rhodanese-like domain 272 352 1.2E-9 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 Pfam PF00581 Rhodanese-like domain 133 227 4.8E-9 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 Pfam PF00581 Rhodanese-like domain 379 470 1.2E-4 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 Pfam PF00581 Rhodanese-like domain 13 104 1.0E-8 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 SMART SM00450 268 360 7.4E-5 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 SMART SM00450 378 474 3.9E-4 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 SMART SM00450 10 107 1.7E-9 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 SMART SM00450 133 231 4.9E-8 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 SUPERFAMILY SSF52821 9 126 4.19E-20 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 PANTHER PTHR12231 256 352 3.8E-47 T 22-04-2016 LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 PANTHER PTHR12231 23 32 3.8E-47 T 22-04-2016 LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 SUPERFAMILY SSF52821 108 235 7.07E-30 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 Gene3D G3DSA:3.40.250.10 14 114 9.1E-17 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 SUPERFAMILY SSF52821 375 527 7.33E-29 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 Gene3D G3DSA:3.40.250.10 124 234 4.8E-19 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04755 3b74eb21b02dbfeab68e3c8feb86e2cd 532 Gene3D G3DSA:3.40.250.10 369 480 3.4E-16 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS08170 be8087f389497334e10d9f4e4db0f1a2 104 PANTHER PTHR34606 1 104 3.3E-46 T 22-04-2016 LK04_RS08170 be8087f389497334e10d9f4e4db0f1a2 104 PANTHER PTHR34606:SF1 1 104 3.3E-46 T 22-04-2016 LK04_RS08170 be8087f389497334e10d9f4e4db0f1a2 104 Pfam PF04972 BON domain 37 104 2.6E-21 T 22-04-2016 IPR007055 BON domain LK04_RS08170 be8087f389497334e10d9f4e4db0f1a2 104 SMART SM00749 42 104 6.1E-6 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 PANTHER PTHR23501 1 518 1.7E-165 T 22-04-2016 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 Pfam PF07690 Major Facilitator Superfamily 27 420 1.0E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 PANTHER PTHR23501:SF51 1 518 1.7E-165 T 22-04-2016 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 Gene3D G3DSA:1.20.1250.20 22 197 1.8E-22 T 22-04-2016 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 25 49 3.3E-9 T 22-04-2016 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 411 430 3.3E-9 T 22-04-2016 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 171 195 3.3E-9 T 22-04-2016 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 3.3E-9 T 22-04-2016 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 116 136 3.3E-9 T 22-04-2016 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 SUPERFAMILY SSF103473 14 204 5.89E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 SUPERFAMILY SSF103473 259 430 5.89E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 SUPERFAMILY SSF103473 489 515 5.89E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 Gene3D G3DSA:1.20.1250.20 495 516 1.9E-18 T 22-04-2016 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 Gene3D G3DSA:1.20.1250.20 274 436 1.9E-18 T 22-04-2016 LK04_RS02490 f1e4637ef679f8191ed04b4f377cc50e 518 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 512 5.7E-122 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LK04_RS16930 f79eb1f6cdb7cc6be9b6f8633f5e5d72 339 PANTHER PTHR22604:SF92 6 336 6.0E-93 T 22-04-2016 LK04_RS16930 f79eb1f6cdb7cc6be9b6f8633f5e5d72 339 Gene3D G3DSA:3.30.360.10 141 336 3.0E-41 T 22-04-2016 LK04_RS16930 f79eb1f6cdb7cc6be9b6f8633f5e5d72 339 SUPERFAMILY SSF51735 6 149 1.97E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16930 f79eb1f6cdb7cc6be9b6f8633f5e5d72 339 SUPERFAMILY SSF55347 135 306 1.59E-20 T 22-04-2016 LK04_RS16930 f79eb1f6cdb7cc6be9b6f8633f5e5d72 339 Gene3D G3DSA:3.40.50.720 6 140 1.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16930 f79eb1f6cdb7cc6be9b6f8633f5e5d72 339 PANTHER PTHR22604 6 336 6.0E-93 T 22-04-2016 LK04_RS16930 f79eb1f6cdb7cc6be9b6f8633f5e5d72 339 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 128 1.9E-32 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS17420 b1775a0f6b45fe61eb8666f5917a9084 231 PIRSF PIRSF006232 1 230 3.0E-54 T 22-04-2016 IPR012093 Pirin LK04_RS17420 b1775a0f6b45fe61eb8666f5917a9084 231 PANTHER PTHR13903 1 231 6.8E-117 T 22-04-2016 IPR012093 Pirin LK04_RS17420 b1775a0f6b45fe61eb8666f5917a9084 231 SUPERFAMILY SSF51182 1 231 2.48E-79 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS17420 b1775a0f6b45fe61eb8666f5917a9084 231 Pfam PF02678 Pirin 6 119 8.6E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain LK04_RS17420 b1775a0f6b45fe61eb8666f5917a9084 231 PANTHER PTHR13903:SF7 1 231 6.8E-117 T 22-04-2016 LK04_RS17420 b1775a0f6b45fe61eb8666f5917a9084 231 Gene3D G3DSA:2.60.120.10 4 230 2.7E-70 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS13740 d7d5812e435253b53d563dc5d73026f5 159 PIRSF PIRSF006181 1 159 1.2E-56 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LK04_RS13740 d7d5812e435253b53d563dc5d73026f5 159 PANTHER PTHR30411 1 158 1.0E-71 T 22-04-2016 LK04_RS13740 d7d5812e435253b53d563dc5d73026f5 159 PANTHER PTHR30411:SF0 1 158 1.0E-71 T 22-04-2016 LK04_RS13740 d7d5812e435253b53d563dc5d73026f5 159 Gene3D G3DSA:3.90.960.10 1 157 5.0E-60 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS13740 d7d5812e435253b53d563dc5d73026f5 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 147 5.5E-24 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS13740 d7d5812e435253b53d563dc5d73026f5 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 155 4.3E-56 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LK04_RS13740 d7d5812e435253b53d563dc5d73026f5 159 SUPERFAMILY SSF55826 2 155 1.18E-44 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.1E-51 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 4.1E-51 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 4.1E-51 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 4.1E-51 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 4.1E-51 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 4.1E-51 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 4.1E-51 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 4.1E-51 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 4.1E-51 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 68.387 T 22-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 SUPERFAMILY SSF55424 345 463 2.75E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 SUPERFAMILY SSF51905 1 319 2.81E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 1.2E-29 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PANTHER PTHR22912:SF93 1 461 4.1E-292 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 3.7E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.5E-25 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 5.5E-25 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 5.5E-25 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 5.5E-25 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 5.5E-25 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 Gene3D G3DSA:3.50.50.60 5 150 4.9E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 Gene3D G3DSA:3.50.50.60 279 338 4.9E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PIRSF PIRSF000350 1 463 6.7E-71 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 PANTHER PTHR22912 1 461 4.1E-292 T 22-04-2016 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 Gene3D G3DSA:3.50.50.60 157 278 7.4E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS19685 6318cda2c6464ed70dac4ef598108ceb 466 Gene3D G3DSA:3.30.390.30 345 460 5.8E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 Gene3D G3DSA:3.20.20.120 181 424 1.4E-91 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 SUPERFAMILY SSF51604 183 424 2.88E-68 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 135 5.1E-7 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 PANTHER PTHR13794:SF58 186 423 4.5E-189 T 22-04-2016 LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 PANTHER PTHR13794:SF58 1 150 4.5E-189 T 22-04-2016 LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 SMART SM00922 198 294 1.2E-24 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 Pfam PF13378 Enolase C-terminal domain-like 201 413 1.7E-55 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 PANTHER PTHR13794 186 423 4.5E-189 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 PANTHER PTHR13794 1 150 4.5E-189 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 Gene3D G3DSA:3.30.390.10 2 177 1.0E-89 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 244 275 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LK04_RS14510 d4981bc9d7a3dcd66cff2ff5e642a548 428 SUPERFAMILY SSF54826 3 138 4.21E-36 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS09025 5c164571a43c4a41de9fb0390e1b92f9 476 PANTHER PTHR31806 20 473 5.2E-105 T 22-04-2016 LK04_RS09025 5c164571a43c4a41de9fb0390e1b92f9 476 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 26 448 7.0E-48 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 LK04_RS09025 5c164571a43c4a41de9fb0390e1b92f9 476 PIRSF PIRSF002744 2 470 1.3E-98 T 22-04-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 PANTHER PTHR33175:SF5 1 93 3.4E-49 T 22-04-2016 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 SUPERFAMILY SSF47729 1 91 1.91E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 1.7E-51 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 Gene3D G3DSA:4.10.520.10 1 91 1.2E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 PANTHER PTHR33175 1 93 3.4E-49 T 22-04-2016 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.4E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 SMART SM00411 1 91 2.9E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.1E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.1E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.1E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS12065 936212a2d71285fb3dc244cc07d3f625 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.253 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 799 0.0 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 Pfam PF04324 BFD-like [2Fe-2S] binding domain 422 469 5.4E-14 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 SUPERFAMILY SSF55124 500 627 9.65E-31 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 Gene3D G3DSA:3.50.50.60 106 308 2.0E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 Gene3D G3DSA:3.50.50.60 2 105 2.3E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00397 Sirohaem Fe-binding site signature 677 695 8.6E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00397 Sirohaem Fe-binding site signature 634 652 8.6E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 SUPERFAMILY SSF51905 1 309 6.49E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 677 693 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 9.9E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PIRSF PIRSF037149 1 833 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PANTHER PTHR11493 417 832 0.0 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PANTHER PTHR11493 2 255 0.0 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 8.2E-9 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 8.2E-9 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 8.2E-9 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 8.2E-9 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 SUPERFAMILY SSF56014 631 805 3.4E-45 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 631 748 3.9E-14 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 4.1E-15 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.1E-15 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.1E-15 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.1E-15 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 4.1E-15 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 Gene3D G3DSA:3.30.413.10 632 766 1.2E-30 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PANTHER PTHR11493:SF52 417 832 0.0 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 PANTHER PTHR11493:SF52 2 255 0.0 T 22-04-2016 LK04_RS00685 f382ffe3dbd952a5494ad4009ab7dc9c 846 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 558 619 5.1E-11 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS05590 32ca4f44abfd72cdb4c87334cda7ff8c 523 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 294 461 3.6E-17 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LK04_RS05590 32ca4f44abfd72cdb4c87334cda7ff8c 523 Gene3D G3DSA:3.30.420.40 3 253 8.2E-58 T 22-04-2016 LK04_RS05590 32ca4f44abfd72cdb4c87334cda7ff8c 523 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 253 9.7E-48 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LK04_RS05590 32ca4f44abfd72cdb4c87334cda7ff8c 523 Gene3D G3DSA:3.30.420.40 256 508 1.0E-41 T 22-04-2016 LK04_RS05590 32ca4f44abfd72cdb4c87334cda7ff8c 523 PIRSF PIRSF000538 4 512 9.9E-115 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS05590 32ca4f44abfd72cdb4c87334cda7ff8c 523 SUPERFAMILY SSF53067 7 256 3.45E-56 T 22-04-2016 LK04_RS05590 32ca4f44abfd72cdb4c87334cda7ff8c 523 SUPERFAMILY SSF53067 255 504 3.46E-50 T 22-04-2016 LK04_RS05590 32ca4f44abfd72cdb4c87334cda7ff8c 523 PANTHER PTHR10196 7 517 0.0 T 22-04-2016 LK04_RS05590 32ca4f44abfd72cdb4c87334cda7ff8c 523 PANTHER PTHR10196:SF70 7 517 0.0 T 22-04-2016 LK04_RS00960 cf5ca1b14980a4ca88250b38eb0fdd1e 59 PANTHER PTHR15892 1 59 2.6E-28 T 22-04-2016 LK04_RS00960 cf5ca1b14980a4ca88250b38eb0fdd1e 59 Gene3D G3DSA:3.30.1390.20 2 59 6.3E-30 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LK04_RS00960 cf5ca1b14980a4ca88250b38eb0fdd1e 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 53 1.7E-18 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LK04_RS00960 cf5ca1b14980a4ca88250b38eb0fdd1e 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.038 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LK04_RS00960 cf5ca1b14980a4ca88250b38eb0fdd1e 59 PIRSF PIRSF002211 1 59 1.6E-28 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LK04_RS00960 cf5ca1b14980a4ca88250b38eb0fdd1e 59 SUPERFAMILY SSF55129 3 59 1.02E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LK04_RS00960 cf5ca1b14980a4ca88250b38eb0fdd1e 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.5E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LK04_RS16690 1f57d18787ddbd3971f9814506c9d9dc 142 PANTHER PTHR11545 1 142 5.5E-81 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LK04_RS16690 1f57d18787ddbd3971f9814506c9d9dc 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 LK04_RS16690 1f57d18787ddbd3971f9814506c9d9dc 142 Pfam PF00572 Ribosomal protein L13 15 138 7.1E-57 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LK04_RS16690 1f57d18787ddbd3971f9814506c9d9dc 142 Gene3D G3DSA:3.90.1180.10 3 141 8.4E-65 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 LK04_RS16690 1f57d18787ddbd3971f9814506c9d9dc 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.356 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LK04_RS16690 1f57d18787ddbd3971f9814506c9d9dc 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 3.8E-67 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 LK04_RS16690 1f57d18787ddbd3971f9814506c9d9dc 142 PIRSF PIRSF002181 1 142 5.0E-51 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LK04_RS16690 1f57d18787ddbd3971f9814506c9d9dc 142 SUPERFAMILY SSF52161 1 140 2.62E-60 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 LK04_RS15600 fb0fb15c26f8173c80f12824c654ffca 156 SUPERFAMILY SSF54534 5 143 6.48E-34 T 22-04-2016 LK04_RS15600 fb0fb15c26f8173c80f12824c654ffca 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 140 2.3E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LK04_RS15600 fb0fb15c26f8173c80f12824c654ffca 156 PANTHER PTHR10516 1 77 1.1E-20 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LK04_RS15600 fb0fb15c26f8173c80f12824c654ffca 156 PANTHER PTHR10516 133 145 1.1E-20 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LK04_RS15600 fb0fb15c26f8173c80f12824c654ffca 156 Gene3D G3DSA:3.10.50.40 4 80 5.6E-17 T 22-04-2016 LK04_RS15600 fb0fb15c26f8173c80f12824c654ffca 156 Gene3D G3DSA:3.10.50.40 130 144 5.6E-17 T 22-04-2016 LK04_RS15600 fb0fb15c26f8173c80f12824c654ffca 156 PANTHER PTHR10516:SF329 1 77 1.1E-20 T 22-04-2016 LK04_RS15600 fb0fb15c26f8173c80f12824c654ffca 156 PANTHER PTHR10516:SF329 133 145 1.1E-20 T 22-04-2016 LK04_RS06670 39f0a7dfc6587813447575dfe9637594 378 Pfam PF07969 Amidohydrolase family 244 378 2.1E-12 T 22-04-2016 IPR013108 Amidohydrolase 3 LK04_RS06670 39f0a7dfc6587813447575dfe9637594 378 SUPERFAMILY SSF51338 2 50 5.08E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS06670 39f0a7dfc6587813447575dfe9637594 378 SUPERFAMILY SSF51338 345 377 5.08E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS06670 39f0a7dfc6587813447575dfe9637594 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 3 378 1.3E-155 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 LK04_RS06670 39f0a7dfc6587813447575dfe9637594 378 PIRSF PIRSF038971 1 378 3.6E-152 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 LK04_RS06670 39f0a7dfc6587813447575dfe9637594 378 PANTHER PTHR11271:SF43 1 378 2.1E-168 T 22-04-2016 LK04_RS06670 39f0a7dfc6587813447575dfe9637594 378 Gene3D G3DSA:2.30.40.10 1 87 6.1E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS06670 39f0a7dfc6587813447575dfe9637594 378 PANTHER PTHR11271 1 378 2.1E-168 T 22-04-2016 LK04_RS06670 39f0a7dfc6587813447575dfe9637594 378 Gene3D G3DSA:3.20.20.140 88 375 6.6E-12 T 22-04-2016 LK04_RS06670 39f0a7dfc6587813447575dfe9637594 378 SUPERFAMILY SSF51556 50 345 7.54E-23 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 PANTHER PTHR11689 13 553 3.9E-49 T 22-04-2016 LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 Gene3D G3DSA:1.10.3080.10 9 415 7.2E-64 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 Pfam PF00654 Voltage gated chloride channel 94 405 7.1E-66 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 SUPERFAMILY SSF81340 9 418 1.83E-78 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 Gene3D G3DSA:3.10.580.10 443 553 4.7E-14 T 22-04-2016 LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 PANTHER PTHR11689:SF14 13 553 3.9E-49 T 22-04-2016 LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 PRINTS PR00762 Chloride channel signature 374 393 2.5E-15 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 PRINTS PR00762 Chloride channel signature 110 129 2.5E-15 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 PRINTS PR00762 Chloride channel signature 356 372 2.5E-15 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 PRINTS PR00762 Chloride channel signature 322 342 2.5E-15 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 SMART SM00116 441 489 8.0 T 22-04-2016 IPR000644 CBS domain LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 SMART SM00116 506 556 2.2 T 22-04-2016 IPR000644 CBS domain LK04_RS01710 ec59a64299f8f4132517d81227e71890 559 SUPERFAMILY SSF54631 442 554 9.73E-16 T 22-04-2016 LK04_RS12965 ba36b230c314253c1f7579c1a8986cb0 119 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 45 98 6.0E-6 T 22-04-2016 IPR020363 Uncharacterised protein family YbgS LK04_RS12965 ba36b230c314253c1f7579c1a8986cb0 119 Pfam PF13985 YbgS-like protein 2 119 8.4E-54 T 22-04-2016 IPR020363 Uncharacterised protein family YbgS LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 SMART SM00895 107 230 2.4E-16 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 SUPERFAMILY SSF48008 107 231 7.06E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 PANTHER PTHR11751 101 123 1.2E-23 T 22-04-2016 LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 PANTHER PTHR11751 14 81 1.2E-23 T 22-04-2016 LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 SMART SM00345 19 78 1.1E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 Gene3D G3DSA:1.20.120.530 102 230 4.3E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 Gene3D G3DSA:1.10.10.10 18 89 5.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 Pfam PF07729 FCD domain 107 225 1.5E-20 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 78 1.5E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 SUPERFAMILY SSF46785 14 82 4.77E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15010 da8890cdf9fc635f528cd21ea58859db 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS14075 87bd287ea9cf4308b26fb4b1049187a6 299 Pfam PF00348 Polyprenyl synthetase 32 268 2.2E-57 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LK04_RS14075 87bd287ea9cf4308b26fb4b1049187a6 299 PANTHER PTHR12001 1 280 1.8E-107 T 22-04-2016 IPR017446 Polyprenyl synthetase-related LK04_RS14075 87bd287ea9cf4308b26fb4b1049187a6 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LK04_RS14075 87bd287ea9cf4308b26fb4b1049187a6 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LK04_RS14075 87bd287ea9cf4308b26fb4b1049187a6 299 SUPERFAMILY SSF48576 1 275 2.26E-88 T 22-04-2016 IPR008949 Isoprenoid synthase domain LK04_RS14075 87bd287ea9cf4308b26fb4b1049187a6 299 PANTHER PTHR12001:SF23 1 280 1.8E-107 T 22-04-2016 LK04_RS14075 87bd287ea9cf4308b26fb4b1049187a6 299 Gene3D G3DSA:1.10.600.10 2 281 1.0E-89 T 22-04-2016 IPR008949 Isoprenoid synthase domain LK04_RS17675 9a263e2e1c04d9fcf1f9df9171a2ab78 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 24 531 4.9E-231 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LK04_RS17675 9a263e2e1c04d9fcf1f9df9171a2ab78 532 Gene3D G3DSA:1.20.1220.12 414 525 4.4E-34 T 22-04-2016 LK04_RS17675 9a263e2e1c04d9fcf1f9df9171a2ab78 532 ProSitePatterns PS00510 Malate synthase signature. 265 280 - T 22-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LK04_RS17675 9a263e2e1c04d9fcf1f9df9171a2ab78 532 PANTHER PTHR21631:SF1 1 531 1.7E-256 T 22-04-2016 LK04_RS17675 9a263e2e1c04d9fcf1f9df9171a2ab78 532 PIRSF PIRSF001363 1 532 1.2E-236 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LK04_RS17675 9a263e2e1c04d9fcf1f9df9171a2ab78 532 Pfam PF01274 Malate synthase 12 531 9.4E-195 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LK04_RS17675 9a263e2e1c04d9fcf1f9df9171a2ab78 532 SUPERFAMILY SSF51645 15 531 8.11E-181 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LK04_RS17675 9a263e2e1c04d9fcf1f9df9171a2ab78 532 Gene3D G3DSA:3.20.20.360 72 413 3.3E-116 T 22-04-2016 LK04_RS17675 9a263e2e1c04d9fcf1f9df9171a2ab78 532 PANTHER PTHR21631 1 531 1.7E-256 T 22-04-2016 LK04_RS10900 277164fdab87f35f7ae8eb41d921fa24 340 Pfam PF13379 NMT1-like family 45 282 2.5E-16 T 22-04-2016 LK04_RS10900 277164fdab87f35f7ae8eb41d921fa24 340 Gene3D G3DSA:3.40.190.10 136 226 4.2E-14 T 22-04-2016 LK04_RS10900 277164fdab87f35f7ae8eb41d921fa24 340 SUPERFAMILY SSF53850 45 278 2.96E-31 T 22-04-2016 LK04_RS10900 277164fdab87f35f7ae8eb41d921fa24 340 PANTHER PTHR30024 7 294 1.1E-36 T 22-04-2016 LK04_RS16505 6e74bfed90d9204bf0e53193437554d2 416 Gene3D G3DSA:1.20.1250.20 231 411 4.2E-13 T 22-04-2016 LK04_RS16505 6e74bfed90d9204bf0e53193437554d2 416 PANTHER PTHR23513:SF9 1 413 1.3E-105 T 22-04-2016 LK04_RS16505 6e74bfed90d9204bf0e53193437554d2 416 Pfam PF05977 Transmembrane secretion effector 16 403 7.9E-26 T 22-04-2016 IPR010290 Transmembrane secretion effector LK04_RS16505 6e74bfed90d9204bf0e53193437554d2 416 SUPERFAMILY SSF103473 18 404 1.83E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS16505 6e74bfed90d9204bf0e53193437554d2 416 PANTHER PTHR23513 1 413 1.3E-105 T 22-04-2016 LK04_RS16505 6e74bfed90d9204bf0e53193437554d2 416 Gene3D G3DSA:1.20.1250.20 19 207 8.2E-19 T 22-04-2016 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 60.261 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 Gene3D G3DSA:1.10.10.10 2 77 3.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 SUPERFAMILY SSF46785 3 77 4.53E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 5.2E-25 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 SUPERFAMILY SSF55252 82 148 9.16E-20 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 150 1.5E-47 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 Gene3D G3DSA:3.30.1360.40 80 154 8.2E-27 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 1.0E-27 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 4.2E-25 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 4.2E-25 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 4.2E-25 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 4.2E-25 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 PANTHER PTHR34471 2 156 6.2E-68 T 22-04-2016 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 146 4.2E-23 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 LK04_RS01265 3e930904cc73f0c4220e77d65e7efbd9 156 PANTHER PTHR34471:SF1 2 156 6.2E-68 T 22-04-2016 LK04_RS09455 4693cb1158876f98a26e8ce2be056fde 667 PANTHER PTHR32234 1 667 2.5E-176 T 22-04-2016 LK04_RS09455 4693cb1158876f98a26e8ce2be056fde 667 PANTHER PTHR32234:SF3 1 667 2.5E-176 T 22-04-2016 LK04_RS09455 4693cb1158876f98a26e8ce2be056fde 667 Gene3D G3DSA:3.40.30.10 554 636 4.4E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS09455 4693cb1158876f98a26e8ce2be056fde 667 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 283 485 8.1E-9 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 LK04_RS09455 4693cb1158876f98a26e8ce2be056fde 667 Pfam PF13899 Thioredoxin-like 555 640 2.3E-16 T 22-04-2016 LK04_RS09455 4693cb1158876f98a26e8ce2be056fde 667 Pfam PF11412 Disulphide bond corrector protein DsbC 42 141 2.4E-19 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LK04_RS09455 4693cb1158876f98a26e8ce2be056fde 667 SUPERFAMILY SSF52833 553 649 1.98E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS19805 8ae3af08c01ff625dad366412a894f59 444 Pfam PF00083 Sugar (and other) transporter 24 233 3.3E-25 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS19805 8ae3af08c01ff625dad366412a894f59 444 PANTHER PTHR23508:SF16 5 442 1.6E-231 T 22-04-2016 LK04_RS19805 8ae3af08c01ff625dad366412a894f59 444 SUPERFAMILY SSF103473 21 440 6.28E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS19805 8ae3af08c01ff625dad366412a894f59 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 326 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS19805 8ae3af08c01ff625dad366412a894f59 444 PANTHER PTHR23508 5 442 1.6E-231 T 22-04-2016 LK04_RS19805 8ae3af08c01ff625dad366412a894f59 444 Gene3D G3DSA:1.20.1250.20 251 438 7.6E-18 T 22-04-2016 LK04_RS19805 8ae3af08c01ff625dad366412a894f59 444 Gene3D G3DSA:1.20.1250.20 21 231 7.7E-24 T 22-04-2016 LK04_RS19805 8ae3af08c01ff625dad366412a894f59 444 Pfam PF07690 Major Facilitator Superfamily 284 431 7.1E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS19805 8ae3af08c01ff625dad366412a894f59 444 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 31 426 1.4E-150 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 LK04_RS00875 fafca007bd7a8e3f376b602000aa2bea 201 Gene3D G3DSA:3.40.1370.10 54 201 1.9E-58 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 LK04_RS00875 fafca007bd7a8e3f376b602000aa2bea 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.8E-63 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 LK04_RS00875 fafca007bd7a8e3f376b602000aa2bea 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.88 T 22-04-2016 IPR013005 50S ribosomal protein uL4 LK04_RS00875 fafca007bd7a8e3f376b602000aa2bea 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.2E-74 T 22-04-2016 IPR013005 50S ribosomal protein uL4 LK04_RS00875 fafca007bd7a8e3f376b602000aa2bea 201 SUPERFAMILY SSF52166 10 200 5.23E-72 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 LK04_RS00875 fafca007bd7a8e3f376b602000aa2bea 201 PANTHER PTHR10746 11 200 8.0E-93 T 22-04-2016 IPR013005 50S ribosomal protein uL4 LK04_RS06570 50b6646a735725761480c717243c788d 283 PANTHER PTHR30465 20 279 4.2E-60 T 22-04-2016 LK04_RS06570 50b6646a735725761480c717243c788d 283 SUPERFAMILY SSF161098 73 260 1.18E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06570 50b6646a735725761480c717243c788d 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 273 8.0E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06570 50b6646a735725761480c717243c788d 283 Gene3D G3DSA:1.10.3720.10 70 271 1.4E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06570 50b6646a735725761480c717243c788d 283 PANTHER PTHR30465:SF10 20 279 4.2E-60 T 22-04-2016 LK04_RS06125 fed3de8698a1b477aa348b770d2aa67e 295 Gene3D G3DSA:3.90.25.10 172 184 3.1E-27 T 22-04-2016 LK04_RS06125 fed3de8698a1b477aa348b770d2aa67e 295 Gene3D G3DSA:3.90.25.10 221 283 3.1E-27 T 22-04-2016 LK04_RS06125 fed3de8698a1b477aa348b770d2aa67e 295 SUPERFAMILY SSF51735 1 293 1.23E-100 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06125 fed3de8698a1b477aa348b770d2aa67e 295 Pfam PF04321 RmlD substrate binding domain 1 293 1.5E-105 T 22-04-2016 IPR029903 RmlD-like substrate binding domain LK04_RS06125 fed3de8698a1b477aa348b770d2aa67e 295 Gene3D G3DSA:3.40.50.720 1 171 6.5E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06125 fed3de8698a1b477aa348b770d2aa67e 295 PANTHER PTHR10491 1 294 2.4E-95 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family LK04_RS06125 fed3de8698a1b477aa348b770d2aa67e 295 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 292 4.2E-97 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family LK04_RS06125 fed3de8698a1b477aa348b770d2aa67e 295 PANTHER PTHR10491:SF4 1 294 2.4E-95 T 22-04-2016 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 Pfam PF10415 Fumarase C C-terminus 411 464 3.0E-17 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 PANTHER PTHR11444 1 477 2.1E-296 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 PANTHER PTHR11444:SF25 1 477 2.1E-296 T 22-04-2016 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 Pfam PF00206 Lyase 15 345 1.8E-110 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 SUPERFAMILY SSF48557 2 457 2.5E-142 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 Gene3D G3DSA:1.10.275.10 4 142 1.1E-56 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 9.1E-263 T 22-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 Gene3D G3DSA:1.10.40.30 411 462 2.7E-19 T 22-04-2016 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 Gene3D G3DSA:1.20.200.10 143 405 7.7E-86 T 22-04-2016 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 6.2E-5 T 22-04-2016 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 6.2E-5 T 22-04-2016 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 6.2E-5 T 22-04-2016 LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 4.8E-28 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 4.8E-28 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 4.8E-28 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS16760 621f3c5e90c11b28feed8f00717d42df 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 4.8E-28 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS19040 93a61e301f5d82dc9ca2715755d32b71 126 Pfam PF03899 ATP synthase I chain 14 108 2.7E-14 T 22-04-2016 IPR005598 ATP synthase protein I LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 PANTHER PTHR10799:SF710 180 309 6.2E-27 T 22-04-2016 LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 SUPERFAMILY SSF55785 36 149 2.44E-17 T 22-04-2016 IPR000014 PAS domain LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 SMART SM00267 148 314 5.6E-46 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 49 155 5.9E-7 T 22-04-2016 IPR000014 PAS domain LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 SMART SM00091 29 98 0.0051 T 22-04-2016 IPR000014 PAS domain LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 308 4.9E-37 T 22-04-2016 IPR000160 GGDEF domain LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 Gene3D G3DSA:3.30.450.20 8 159 2.0E-30 T 22-04-2016 LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 SUPERFAMILY SSF55073 164 310 3.37E-40 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 Pfam PF08447 PAS fold 55 142 1.0E-18 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 Gene3D G3DSA:3.30.70.270 160 310 9.4E-46 T 22-04-2016 LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 PANTHER PTHR10799 180 309 6.2E-27 T 22-04-2016 LK04_RS02505 c595cae2aeac95bc94b4a243c55e173f 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 310 1.4E-36 T 22-04-2016 IPR000160 GGDEF domain LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 SUPERFAMILY SSF54980 611 700 1.19E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 1.0E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 SMART SM00889 487 609 2.4E-71 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Gene3D G3DSA:2.40.30.10 312 412 9.7E-38 T 22-04-2016 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PANTHER PTHR23115:SF66 310 702 0.0 T 22-04-2016 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 SUPERFAMILY SSF50447 271 411 3.09E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PANTHER PTHR23115 310 702 0.0 T 22-04-2016 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Gene3D G3DSA:3.40.50.300 6 292 2.5E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Gene3D G3DSA:3.30.70.870 413 487 7.9E-39 T 22-04-2016 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Pfam PF03764 Elongation factor G, domain IV 486 609 2.1E-45 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 5.4E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 SMART SM00838 611 698 3.7E-50 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Gene3D G3DSA:3.30.230.10 491 609 5.1E-46 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 110.771 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 SUPERFAMILY SSF54211 486 610 1.57E-39 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 1.6E-67 T 22-04-2016 LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Gene3D G3DSA:3.30.70.240 610 696 1.5E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Pfam PF14492 Elongation Factor G, domain II 411 485 7.8E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 Pfam PF00679 Elongation factor G C-terminus 611 696 6.4E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS00845 41b0fa56d884f6d6f0c7ccd84507ce32 704 SUPERFAMILY SSF52540 6 287 4.65E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02680 b82e0c2659dafebda240dec4cf4a7961 458 PANTHER PTHR33843 1 457 1.5E-243 T 22-04-2016 LK04_RS02680 b82e0c2659dafebda240dec4cf4a7961 458 PANTHER PTHR33843:SF4 1 457 1.5E-243 T 22-04-2016 LK04_RS02680 b82e0c2659dafebda240dec4cf4a7961 458 Pfam PF03611 PTS system sugar-specific permease component 13 408 8.6E-144 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 LK04_RS08160 edc9f6c98e09ed4d2581232110f9db53 244 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 242 4.4E-89 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 LK04_RS08160 edc9f6c98e09ed4d2581232110f9db53 244 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 244 21.902 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 PANTHER PTHR24031:SF334 3 431 2.2E-225 T 22-04-2016 LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 SMART SM00487 23 223 4.3E-60 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 Pfam PF00271 Helicase conserved C-terminal domain 235 343 3.2E-28 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 Gene3D G3DSA:3.40.50.300 215 375 8.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 SMART SM00490 262 343 2.3E-27 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 PANTHER PTHR24031 3 431 2.2E-225 T 22-04-2016 LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 Pfam PF00270 DEAD/DEAH box helicase 28 198 1.8E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 Gene3D G3DSA:3.40.50.300 3 214 5.8E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 SUPERFAMILY SSF52540 3 211 2.56E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 SUPERFAMILY SSF52540 149 368 5.47E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03985 0d77ed0aba8cfe9f708f6e8de57929b0 442 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 49.371 T 22-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 LK04_RS03420 692465f5c7b8697c68032d91ffcedd79 545 Gene3D G3DSA:3.40.50.300 1 280 2.0E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03420 692465f5c7b8697c68032d91ffcedd79 545 SUPERFAMILY SSF52317 289 541 7.1E-89 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS03420 692465f5c7b8697c68032d91ffcedd79 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.0E-63 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LK04_RS03420 692465f5c7b8697c68032d91ffcedd79 545 Gene3D G3DSA:3.40.50.880 289 541 1.4E-98 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS03420 692465f5c7b8697c68032d91ffcedd79 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.297 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LK04_RS03420 692465f5c7b8697c68032d91ffcedd79 545 SUPERFAMILY SSF52540 3 269 1.03E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03420 692465f5c7b8697c68032d91ffcedd79 545 PANTHER PTHR11550 1 543 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LK04_RS03420 692465f5c7b8697c68032d91ffcedd79 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.8E-264 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LK04_RS03420 692465f5c7b8697c68032d91ffcedd79 545 Pfam PF06418 CTP synthase N-terminus 5 266 2.3E-126 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LK04_RS12250 e76aa8d4fed26a34b3ee11dc3eaf4c4d 154 Pfam PF10767 Protein of unknown function (DUF2593) 13 152 1.9E-65 T 22-04-2016 IPR019703 Protein of unknown function DUF2593 LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 Gene3D G3DSA:2.40.170.20 183 757 1.6E-118 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 740 757 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 179 1.7E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 PANTHER PTHR30069:SF5 352 635 0.0 T 22-04-2016 LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 PANTHER PTHR30069:SF5 35 296 0.0 T 22-04-2016 LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 Gene3D G3DSA:2.170.130.10 66 182 7.5E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 757 8.1E-116 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 SUPERFAMILY SSF56935 53 757 4.35E-130 T 22-04-2016 LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 PANTHER PTHR30069 352 635 0.0 T 22-04-2016 LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 PANTHER PTHR30069 35 296 0.0 T 22-04-2016 LK04_RS16475 7ab4603d1aa2dae191e655e39b0982df 757 Pfam PF00593 TonB dependent receptor 475 755 2.4E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS13495 e278b493fe8483a861c9d5bf65ce19a5 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 263 1.9E-51 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13495 e278b493fe8483a861c9d5bf65ce19a5 275 PANTHER PTHR10000 4 269 4.1E-92 T 22-04-2016 LK04_RS13495 e278b493fe8483a861c9d5bf65ce19a5 275 SUPERFAMILY SSF56784 4 267 3.83E-58 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13495 e278b493fe8483a861c9d5bf65ce19a5 275 Gene3D G3DSA:3.40.50.1000 3 75 3.3E-44 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13495 e278b493fe8483a861c9d5bf65ce19a5 275 Gene3D G3DSA:3.40.50.1000 183 268 3.3E-44 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13495 e278b493fe8483a861c9d5bf65ce19a5 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 1.1E-18 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LK04_RS13495 e278b493fe8483a861c9d5bf65ce19a5 275 Gene3D G3DSA:3.30.1240.10 85 182 6.0E-25 T 22-04-2016 LK04_RS13495 e278b493fe8483a861c9d5bf65ce19a5 275 PANTHER PTHR10000:SF27 4 269 4.1E-92 T 22-04-2016 LK04_RS13495 e278b493fe8483a861c9d5bf65ce19a5 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 263 4.3E-50 T 22-04-2016 IPR000150 Cof protein GO:0016787 LK04_RS06395 fc7cc7ee7f6e1bd9479a3f9def6fc163 171 PANTHER PTHR23091:SF259 1 142 3.9E-17 T 22-04-2016 LK04_RS06395 fc7cc7ee7f6e1bd9479a3f9def6fc163 171 PANTHER PTHR23091 1 142 3.9E-17 T 22-04-2016 LK04_RS06395 fc7cc7ee7f6e1bd9479a3f9def6fc163 171 Pfam PF00583 Acetyltransferase (GNAT) family 62 142 1.5E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS06395 fc7cc7ee7f6e1bd9479a3f9def6fc163 171 SUPERFAMILY SSF55729 2 150 2.06E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS06395 fc7cc7ee7f6e1bd9479a3f9def6fc163 171 Gene3D G3DSA:3.40.630.30 4 146 8.8E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS18625 5415645c6c45d97252100097a16f7d2c 310 SUPERFAMILY SSF52317 5 196 1.49E-33 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS18625 5415645c6c45d97252100097a16f7d2c 310 Gene3D G3DSA:1.10.10.60 220 268 4.7E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18625 5415645c6c45d97252100097a16f7d2c 310 PANTHER PTHR11019 89 303 3.7E-38 T 22-04-2016 LK04_RS18625 5415645c6c45d97252100097a16f7d2c 310 Pfam PF01965 DJ-1/PfpI family 5 175 1.2E-10 T 22-04-2016 IPR002818 DJ-1/PfpI LK04_RS18625 5415645c6c45d97252100097a16f7d2c 310 Gene3D G3DSA:3.40.50.880 5 219 1.2E-41 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS18625 5415645c6c45d97252100097a16f7d2c 310 Pfam PF12833 Helix-turn-helix domain 237 304 7.3E-13 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS18625 5415645c6c45d97252100097a16f7d2c 310 PANTHER PTHR11019:SF58 89 303 3.7E-38 T 22-04-2016 LK04_RS18625 5415645c6c45d97252100097a16f7d2c 310 SMART SM00342 231 310 6.9E-8 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS18625 5415645c6c45d97252100097a16f7d2c 310 SUPERFAMILY SSF46689 214 264 1.12E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS04810 f4553edee7f2f3d13b75cc0fd430888d 563 Gene3D G3DSA:3.30.565.10 405 545 3.7E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04810 f4553edee7f2f3d13b75cc0fd430888d 563 SUPERFAMILY SSF55874 407 544 1.44E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04810 f4553edee7f2f3d13b75cc0fd430888d 563 SUPERFAMILY SSF55781 221 339 2.7E-7 T 22-04-2016 IPR029016 GAF domain-like LK04_RS04810 f4553edee7f2f3d13b75cc0fd430888d 563 SMART SM00387 446 548 3.2E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04810 f4553edee7f2f3d13b75cc0fd430888d 563 Pfam PF06580 Histidine kinase 353 432 6.4E-25 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 LK04_RS04810 f4553edee7f2f3d13b75cc0fd430888d 563 PANTHER PTHR34220 1 554 6.0E-251 T 22-04-2016 LK04_RS04810 f4553edee7f2f3d13b75cc0fd430888d 563 PANTHER PTHR34220:SF2 1 554 6.0E-251 T 22-04-2016 LK04_RS04810 f4553edee7f2f3d13b75cc0fd430888d 563 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 450 546 1.4E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS04810 f4553edee7f2f3d13b75cc0fd430888d 563 Pfam PF07694 5TMR of 5TMR-LYT 23 184 2.7E-45 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 LK04_RS04810 f4553edee7f2f3d13b75cc0fd430888d 563 Gene3D G3DSA:3.30.450.40 272 351 6.5E-5 T 22-04-2016 IPR029016 GAF domain-like LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 Gene3D G3DSA:3.30.499.10 403 519 1.4E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.2E-66 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 PIRSF PIRSF036687 1 859 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 PANTHER PTHR11670 305 860 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 Gene3D G3DSA:3.40.1060.10 520 682 9.6E-87 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 SUPERFAMILY SSF53732 379 859 9.81E-149 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 Gene3D G3DSA:3.30.499.10 684 859 1.7E-53 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.6E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 SUPERFAMILY SSF52016 162 371 1.88E-71 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 382 1.5E-96 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 PANTHER PTHR11670:SF39 305 860 0.0 T 22-04-2016 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 SUPERFAMILY SSF74778 2 160 1.05E-67 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 Gene3D G3DSA:3.20.19.10 162 360 5.4E-95 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LK04_RS15255 10bdb2375a91ca82d587d6ab09e0d9e3 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS03695 4eeb23671fe26fff70290b9a0fa5eb1f 246 PANTHER PTHR37423 1 244 4.0E-112 T 22-04-2016 LK04_RS03695 4eeb23671fe26fff70290b9a0fa5eb1f 246 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 245 46.518 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD LK04_RS03695 4eeb23671fe26fff70290b9a0fa5eb1f 246 Pfam PF13525 Outer membrane lipoprotein 30 238 5.9E-83 T 22-04-2016 LK04_RS03695 4eeb23671fe26fff70290b9a0fa5eb1f 246 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 244 9.6E-87 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD LK04_RS03695 4eeb23671fe26fff70290b9a0fa5eb1f 246 SUPERFAMILY SSF48452 34 107 3.57E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS06115 8563748492292d5ec9aaf290874fe5df 337 Gene3D G3DSA:3.40.50.720 1 179 1.0E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06115 8563748492292d5ec9aaf290874fe5df 337 PANTHER PTHR10366:SF39 2 337 8.0E-143 T 22-04-2016 LK04_RS06115 8563748492292d5ec9aaf290874fe5df 337 SUPERFAMILY SSF51735 1 335 1.89E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06115 8563748492292d5ec9aaf290874fe5df 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 262 1.9E-59 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LK04_RS06115 8563748492292d5ec9aaf290874fe5df 337 PANTHER PTHR10366 2 337 8.0E-143 T 22-04-2016 LK04_RS06115 8563748492292d5ec9aaf290874fe5df 337 Gene3D G3DSA:3.90.25.10 264 336 4.1E-48 T 22-04-2016 LK04_RS06115 8563748492292d5ec9aaf290874fe5df 337 Gene3D G3DSA:3.90.25.10 180 232 4.1E-48 T 22-04-2016 LK04_RS06115 8563748492292d5ec9aaf290874fe5df 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 6.8E-135 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 Gene3D G3DSA:2.30.40.10 1 66 1.1E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 PANTHER PTHR11647 1 86 1.8E-12 T 22-04-2016 LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 SUPERFAMILY SSF51556 51 316 3.0E-68 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 3 363 3.2E-167 T 22-04-2016 IPR020043 Amidohydrolase EF0837/AHA3915, putative KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 Pfam PF01979 Amidohydrolase family 47 333 4.1E-8 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 PIRSF PIRSF039004 1 375 5.0E-132 T 22-04-2016 IPR020043 Amidohydrolase EF0837/AHA3915, putative KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 PANTHER PTHR11647:SF73 1 86 1.8E-12 T 22-04-2016 LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 SUPERFAMILY SSF51338 300 364 2.37E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 Gene3D G3DSA:2.30.40.10 303 364 8.2E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 Gene3D G3DSA:3.20.20.140 67 302 1.1E-109 T 22-04-2016 LK04_RS01560 f7b8a52c6f704c662f1558f96e9a780a 377 SUPERFAMILY SSF51338 1 59 7.83E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS04320 6b685783132d41a01e126e6280d3c42f 255 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS04320 6b685783132d41a01e126e6280d3c42f 255 PANTHER PTHR24220:SF585 10 253 1.7E-127 T 22-04-2016 LK04_RS04320 6b685783132d41a01e126e6280d3c42f 255 PANTHER PTHR24220 10 253 1.7E-127 T 22-04-2016 LK04_RS04320 6b685783132d41a01e126e6280d3c42f 255 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 9 255 1.3E-117 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 LK04_RS04320 6b685783132d41a01e126e6280d3c42f 255 SMART SM00382 33 253 1.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS04320 6b685783132d41a01e126e6280d3c42f 255 Gene3D G3DSA:3.40.50.300 4 246 7.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04320 6b685783132d41a01e126e6280d3c42f 255 Pfam PF00005 ABC transporter 24 180 2.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS04320 6b685783132d41a01e126e6280d3c42f 255 SUPERFAMILY SSF52540 5 242 1.16E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01150 76da83c7f97eeb639b588e48d2ad290c 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 2.0E-23 T 22-04-2016 IPR010398 Protein of unknown function DUF997 LK04_RS01150 76da83c7f97eeb639b588e48d2ad290c 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 2.0E-28 T 22-04-2016 IPR010398 Protein of unknown function DUF997 LK04_RS01150 76da83c7f97eeb639b588e48d2ad290c 80 PANTHER PTHR39174 1 78 9.0E-30 T 22-04-2016 LK04_RS01150 76da83c7f97eeb639b588e48d2ad290c 80 PANTHER PTHR39174:SF1 1 78 9.0E-30 T 22-04-2016 LK04_RS13950 aa7de2ee794fea39ee5904b7e67c0bdb 134 Gene3D G3DSA:3.10.129.10 2 129 4.2E-43 T 22-04-2016 IPR029069 HotDog domain LK04_RS13950 aa7de2ee794fea39ee5904b7e67c0bdb 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 4.9E-33 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LK04_RS13950 aa7de2ee794fea39ee5904b7e67c0bdb 134 PANTHER PTHR31793 1 131 4.9E-74 T 22-04-2016 LK04_RS13950 aa7de2ee794fea39ee5904b7e67c0bdb 134 PANTHER PTHR31793:SF8 1 131 4.9E-74 T 22-04-2016 LK04_RS13950 aa7de2ee794fea39ee5904b7e67c0bdb 134 PIRSF PIRSF003230 1 133 4.1E-23 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LK04_RS13950 aa7de2ee794fea39ee5904b7e67c0bdb 134 Pfam PF13279 Thioesterase-like superfamily 11 124 6.3E-18 T 22-04-2016 LK04_RS13950 aa7de2ee794fea39ee5904b7e67c0bdb 134 SUPERFAMILY SSF54637 3 129 1.69E-38 T 22-04-2016 IPR029069 HotDog domain LK04_RS07460 d3cf9421fd61dddb6e2f88d6ba52053a 283 SUPERFAMILY SSF53697 92 278 1.17E-37 T 22-04-2016 LK04_RS07460 d3cf9421fd61dddb6e2f88d6ba52053a 283 Gene3D G3DSA:1.10.10.10 1 75 4.3E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS07460 d3cf9421fd61dddb6e2f88d6ba52053a 283 PANTHER PTHR30514:SF7 1 269 7.5E-157 T 22-04-2016 LK04_RS07460 d3cf9421fd61dddb6e2f88d6ba52053a 283 Gene3D G3DSA:3.40.50.10490 94 268 7.0E-35 T 22-04-2016 LK04_RS07460 d3cf9421fd61dddb6e2f88d6ba52053a 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 74 1.9E-26 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LK04_RS07460 d3cf9421fd61dddb6e2f88d6ba52053a 283 SUPERFAMILY SSF46689 2 75 3.94E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS07460 d3cf9421fd61dddb6e2f88d6ba52053a 283 PANTHER PTHR30514 1 269 7.5E-157 T 22-04-2016 LK04_RS07460 d3cf9421fd61dddb6e2f88d6ba52053a 283 Pfam PF01380 SIS domain 123 250 1.5E-21 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS09665 b3cc5f3822cd4a9f6f6afcef0db517ea 238 PANTHER PTHR26402 3 229 1.5E-96 T 22-04-2016 LK04_RS09665 b3cc5f3822cd4a9f6f6afcef0db517ea 238 Gene3D G3DSA:1.10.10.10 132 231 8.5E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09665 b3cc5f3822cd4a9f6f6afcef0db517ea 238 SMART SM00862 153 229 6.3E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS09665 b3cc5f3822cd4a9f6f6afcef0db517ea 238 PANTHER PTHR26402:SF50 3 229 1.5E-96 T 22-04-2016 LK04_RS09665 b3cc5f3822cd4a9f6f6afcef0db517ea 238 Gene3D G3DSA:3.40.50.2300 2 125 1.5E-39 T 22-04-2016 LK04_RS09665 b3cc5f3822cd4a9f6f6afcef0db517ea 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 1.5E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS09665 b3cc5f3822cd4a9f6f6afcef0db517ea 238 SUPERFAMILY SSF46894 130 230 2.78E-30 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS09665 b3cc5f3822cd4a9f6f6afcef0db517ea 238 SMART SM00448 3 114 7.2E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS09665 b3cc5f3822cd4a9f6f6afcef0db517ea 238 SUPERFAMILY SSF52172 3 129 4.27E-40 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS09665 b3cc5f3822cd4a9f6f6afcef0db517ea 238 Pfam PF00072 Response regulator receiver domain 5 114 6.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS12615 3b47fbc1f064d7082404ce1547c2505f 254 PIRSF PIRSF039085 1 254 6.5E-117 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS12615 3b47fbc1f064d7082404ce1547c2505f 254 Gene3D G3DSA:3.40.50.300 4 250 2.2E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12615 3b47fbc1f064d7082404ce1547c2505f 254 SMART SM00382 29 226 3.5E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12615 3b47fbc1f064d7082404ce1547c2505f 254 SUPERFAMILY SSF52540 5 248 2.15E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12615 3b47fbc1f064d7082404ce1547c2505f 254 PANTHER PTHR24220:SF327 6 253 1.0E-131 T 22-04-2016 LK04_RS12615 3b47fbc1f064d7082404ce1547c2505f 254 Pfam PF00005 ABC transporter 20 178 5.8E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12615 3b47fbc1f064d7082404ce1547c2505f 254 PANTHER PTHR24220 6 253 1.0E-131 T 22-04-2016 LK04_RS12615 3b47fbc1f064d7082404ce1547c2505f 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 SUPERFAMILY SSF52317 3 191 7.99E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 Gene3D G3DSA:3.40.50.880 3 189 4.3E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 1.4E-54 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 Pfam PF00117 Glutamine amidotransferase class-I 6 186 3.6E-45 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PANTHER PTHR11922 1 189 1.4E-88 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.0E-5 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.0E-5 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00097 Anthranilate synthase component II signature 104 112 8.4E-36 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00097 Anthranilate synthase component II signature 124 136 8.4E-36 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00097 Anthranilate synthase component II signature 52 61 8.4E-36 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00097 Anthranilate synthase component II signature 79 90 8.4E-36 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00097 Anthranilate synthase component II signature 166 179 8.4E-36 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00097 Anthranilate synthase component II signature 4 18 8.4E-36 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PANTHER PTHR11922:SF25 1 189 1.4E-88 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 6.8E-14 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 6.8E-14 T 22-04-2016 LK04_RS08195 6e618a26ca011708989fd2c67e377716 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 6.8E-14 T 22-04-2016 LK04_RS02420 6c1dbd6e3ed7e5cb16a8576a8b0493e7 347 Pfam PF13407 Periplasmic binding protein domain 64 313 6.7E-37 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS02420 6c1dbd6e3ed7e5cb16a8576a8b0493e7 347 SUPERFAMILY SSF47413 5 49 3.19E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS02420 6c1dbd6e3ed7e5cb16a8576a8b0493e7 347 PANTHER PTHR30146:SF26 6 313 1.6E-49 T 22-04-2016 LK04_RS02420 6c1dbd6e3ed7e5cb16a8576a8b0493e7 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 49 1.0E-8 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS02420 6c1dbd6e3ed7e5cb16a8576a8b0493e7 347 PANTHER PTHR30146 6 313 1.6E-49 T 22-04-2016 LK04_RS02420 6c1dbd6e3ed7e5cb16a8576a8b0493e7 347 SMART SM00354 6 71 5.4E-4 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS02420 6c1dbd6e3ed7e5cb16a8576a8b0493e7 347 Gene3D G3DSA:3.40.50.2300 63 180 9.6E-16 T 22-04-2016 LK04_RS02420 6c1dbd6e3ed7e5cb16a8576a8b0493e7 347 SUPERFAMILY SSF53822 63 317 2.69E-37 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS02420 6c1dbd6e3ed7e5cb16a8576a8b0493e7 347 Gene3D G3DSA:3.40.50.2300 181 323 4.6E-28 T 22-04-2016 LK04_RS02420 6c1dbd6e3ed7e5cb16a8576a8b0493e7 347 Gene3D G3DSA:1.10.260.40 7 49 1.2E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 384 464 3.2E-25 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 PANTHER PTHR11649:SF5 1 465 3.2E-166 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 Gene3D G3DSA:3.40.50.300 3 159 5.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 Gene3D G3DSA:3.40.50.300 208 389 6.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 464 1.9E-178 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 Hamap MF_00195 GTPase Der [der]. 2 467 39.212 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 SUPERFAMILY SSF52540 4 165 2.77E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 152 2.2E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 7.3E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 PIRSF PIRSF006485 1 472 1.1E-178 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 PANTHER PTHR11649 1 465 3.2E-166 T 22-04-2016 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 Gene3D G3DSA:3.30.300.20 390 465 2.0E-22 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 Pfam PF01926 50S ribosome-binding GTPase 5 119 6.5E-29 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 Pfam PF01926 50S ribosome-binding GTPase 211 328 2.0E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS04220 bb1a6d4670bd3531aa5d46efccbd15f8 497 SUPERFAMILY SSF52540 205 470 5.84E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 Gene3D G3DSA:3.30.70.140 2 98 1.0E-36 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 SUPERFAMILY SSF54893 2 100 1.31E-34 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 95 1.1E-29 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 PANTHER PTHR35805:SF1 2 154 9.8E-75 T 22-04-2016 LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 9.6E-18 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.204 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 SUPERFAMILY SSF57825 101 150 2.22E-15 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-45 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 3.2E-65 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 Gene3D G3DSA:2.30.30.20 101 150 3.9E-22 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal LK04_RS16295 69629a443f41543ab052efc0b51721d5 154 PANTHER PTHR35805 2 154 9.8E-75 T 22-04-2016 LK04_RS18065 eb80344c3d7e2bc26a712587d0b355ee 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 297 36.096 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD LK04_RS18065 eb80344c3d7e2bc26a712587d0b355ee 303 Gene3D G3DSA:1.10.150.130 10 103 2.5E-22 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal LK04_RS18065 eb80344c3d7e2bc26a712587d0b355ee 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 94 1.3E-21 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LK04_RS18065 eb80344c3d7e2bc26a712587d0b355ee 303 Pfam PF00589 Phage integrase family 116 283 2.6E-52 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LK04_RS18065 eb80344c3d7e2bc26a712587d0b355ee 303 PANTHER PTHR30349:SF17 11 299 3.5E-160 T 22-04-2016 LK04_RS18065 eb80344c3d7e2bc26a712587d0b355ee 303 Gene3D G3DSA:1.10.443.10 118 290 4.9E-53 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LK04_RS18065 eb80344c3d7e2bc26a712587d0b355ee 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 299 1.6E-107 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 LK04_RS18065 eb80344c3d7e2bc26a712587d0b355ee 303 SUPERFAMILY SSF47823 9 102 1.26E-7 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal LK04_RS18065 eb80344c3d7e2bc26a712587d0b355ee 303 SUPERFAMILY SSF56349 111 295 1.03E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LK04_RS18065 eb80344c3d7e2bc26a712587d0b355ee 303 PANTHER PTHR30349 11 299 3.5E-160 T 22-04-2016 LK04_RS00250 400825de6bd645894c2b62f8ee296979 305 PANTHER PTHR33281 1 304 5.3E-104 T 22-04-2016 LK04_RS00250 400825de6bd645894c2b62f8ee296979 305 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 284 1.2E-56 T 22-04-2016 IPR021134 Bestrophin/UPF0187 LK04_RS00250 400825de6bd645894c2b62f8ee296979 305 PANTHER PTHR33281:SF3 1 304 5.3E-104 T 22-04-2016 LK04_RS19475 49ba6a4a0698237baf2ab5ccbd6a11ec 381 Gene3D G3DSA:3.40.50.2000 60 203 1.9E-20 T 22-04-2016 LK04_RS19475 49ba6a4a0698237baf2ab5ccbd6a11ec 381 PANTHER PTHR30160:SF1 57 346 3.0E-30 T 22-04-2016 LK04_RS19475 49ba6a4a0698237baf2ab5ccbd6a11ec 381 SUPERFAMILY SSF53756 60 380 6.28E-59 T 22-04-2016 LK04_RS19475 49ba6a4a0698237baf2ab5ccbd6a11ec 381 PANTHER PTHR30160 57 346 3.0E-30 T 22-04-2016 LK04_RS19475 49ba6a4a0698237baf2ab5ccbd6a11ec 381 Gene3D G3DSA:3.40.50.2000 220 380 4.3E-33 T 22-04-2016 LK04_RS19475 49ba6a4a0698237baf2ab5ccbd6a11ec 381 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 126 345 7.3E-28 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 LK04_RS15125 a682cfe894e105c9994120f8fb1ee48d 284 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 2.0E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LK04_RS15125 a682cfe894e105c9994120f8fb1ee48d 284 PANTHER PTHR21299 3 284 6.1E-136 T 22-04-2016 LK04_RS15125 a682cfe894e105c9994120f8fb1ee48d 284 Gene3D G3DSA:3.30.1300.10 181 282 3.6E-30 T 22-04-2016 LK04_RS15125 a682cfe894e105c9994120f8fb1ee48d 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 280 6.8E-112 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 LK04_RS15125 a682cfe894e105c9994120f8fb1ee48d 284 PANTHER PTHR21299:SF1 3 284 6.1E-136 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 LK04_RS15125 a682cfe894e105c9994120f8fb1ee48d 284 SUPERFAMILY SSF52374 3 281 9.92E-105 T 22-04-2016 LK04_RS15125 a682cfe894e105c9994120f8fb1ee48d 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.709 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 LK04_RS15125 a682cfe894e105c9994120f8fb1ee48d 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 8.5E-102 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 LK04_RS15125 a682cfe894e105c9994120f8fb1ee48d 284 Gene3D G3DSA:3.40.50.620 3 176 7.2E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS06695 79717d7b698f8ec28b8b303756794f38 287 PANTHER PTHR30043 79 287 2.2E-99 T 22-04-2016 LK04_RS06695 79717d7b698f8ec28b8b303756794f38 287 Gene3D G3DSA:1.10.3720.10 88 281 5.0E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06695 79717d7b698f8ec28b8b303756794f38 287 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 15 281 1.6E-84 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 LK04_RS06695 79717d7b698f8ec28b8b303756794f38 287 PANTHER PTHR30043 7 61 2.2E-99 T 22-04-2016 LK04_RS06695 79717d7b698f8ec28b8b303756794f38 287 SUPERFAMILY SSF161098 88 272 1.16E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06695 79717d7b698f8ec28b8b303756794f38 287 PANTHER PTHR30043:SF1 79 287 2.2E-99 T 22-04-2016 LK04_RS06695 79717d7b698f8ec28b8b303756794f38 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 281 2.0E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06695 79717d7b698f8ec28b8b303756794f38 287 PANTHER PTHR30043:SF1 7 61 2.2E-99 T 22-04-2016 LK04_RS15500 be10d8033015c5409a73b458b9dab8b0 328 PANTHER PTHR30006:SF3 1 327 1.5E-131 T 22-04-2016 LK04_RS15500 be10d8033015c5409a73b458b9dab8b0 328 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 120 137 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 LK04_RS15500 be10d8033015c5409a73b458b9dab8b0 328 PANTHER PTHR30006 1 327 1.5E-131 T 22-04-2016 LK04_RS15500 be10d8033015c5409a73b458b9dab8b0 328 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 19 322 9.8E-146 T 22-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 LK04_RS15500 be10d8033015c5409a73b458b9dab8b0 328 SUPERFAMILY SSF53850 22 327 5.05E-66 T 22-04-2016 LK04_RS15500 be10d8033015c5409a73b458b9dab8b0 328 Pfam PF13343 Bacterial extracellular solute-binding protein 75 290 2.1E-17 T 22-04-2016 LK04_RS15500 be10d8033015c5409a73b458b9dab8b0 328 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 6 328 6.3E-172 T 22-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 LK04_RS15500 be10d8033015c5409a73b458b9dab8b0 328 Gene3D G3DSA:3.40.190.10 180 287 9.6E-10 T 22-04-2016 LK04_RS15500 be10d8033015c5409a73b458b9dab8b0 328 Gene3D G3DSA:3.40.190.10 22 168 5.8E-29 T 22-04-2016 LK04_RS07225 855902b555ee4fd0d011de3b222f4e2b 276 SUPERFAMILY SSF53335 3 273 6.4E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS07225 855902b555ee4fd0d011de3b222f4e2b 276 Pfam PF13847 Methyltransferase domain 112 246 1.1E-23 T 22-04-2016 IPR025714 Methyltransferase domain LK04_RS07225 855902b555ee4fd0d011de3b222f4e2b 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS07225 855902b555ee4fd0d011de3b222f4e2b 276 Gene3D G3DSA:3.40.50.150 87 274 2.8E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS07225 855902b555ee4fd0d011de3b222f4e2b 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 5 273 3.6E-83 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 LK04_RS07225 855902b555ee4fd0d011de3b222f4e2b 276 Gene3D G3DSA:1.10.8.10 2 84 4.6E-28 T 22-04-2016 LK04_RS07225 855902b555ee4fd0d011de3b222f4e2b 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 275 43.966 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 LK04_RS07225 855902b555ee4fd0d011de3b222f4e2b 276 PANTHER PTHR18895 1 274 4.0E-106 T 22-04-2016 LK04_RS07225 855902b555ee4fd0d011de3b222f4e2b 276 PANTHER PTHR18895:SF64 1 274 4.0E-106 T 22-04-2016 LK04_RS07225 855902b555ee4fd0d011de3b222f4e2b 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 4.1E-89 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 LK04_RS13460 12ff56a281db12114f6b2f743fe6d1be 190 SUPERFAMILY SSF56925 33 190 2.04E-74 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS13460 12ff56a281db12114f6b2f743fe6d1be 190 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 5 190 41.289 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 LK04_RS13460 12ff56a281db12114f6b2f743fe6d1be 190 Gene3D G3DSA:2.40.160.20 32 190 6.1E-83 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS13460 12ff56a281db12114f6b2f743fe6d1be 190 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 44 187 4.1E-65 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 LK04_RS13460 12ff56a281db12114f6b2f743fe6d1be 190 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 37 178 2.0E-63 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 PANTHER PTHR22572 7 449 1.4E-220 T 22-04-2016 LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 Gene3D G3DSA:2.160.10.10 245 323 2.4E-17 T 22-04-2016 LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 2.6E-199 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 Gene3D G3DSA:3.90.550.10 2 244 3.8E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 SUPERFAMILY SSF51161 255 437 2.27E-49 T 22-04-2016 IPR011004 Trimeric LpxA-like LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 3.5E-5 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 427 6.4E-6 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 Gene3D G3DSA:2.160.10.10 324 455 4.3E-32 T 22-04-2016 LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 PANTHER PTHR22572:SF115 7 449 1.4E-220 T 22-04-2016 LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 Pfam PF12804 MobA-like NTP transferase domain 8 123 1.1E-20 T 22-04-2016 IPR025877 MobA-like NTP transferase LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 SUPERFAMILY SSF53448 6 252 1.95E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LK04_RS18995 5ff08ecf75b188d9aaaedc71019d7d1c 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 41.865 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 Pfam PF13188 PAS domain 11 60 2.0E-4 T 22-04-2016 IPR000014 PAS domain LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 SUPERFAMILY SSF55874 198 346 4.58E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 SMART SM00388 129 194 2.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 2.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 Gene3D G3DSA:3.30.565.10 198 348 5.3E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 PANTHER PTHR24423:SF488 11 349 3.9E-176 T 22-04-2016 LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 SMART SM00091 7 75 9.2E-6 T 22-04-2016 IPR000014 PAS domain LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 Gene3D G3DSA:3.30.450.20 11 102 1.3E-18 T 22-04-2016 LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 SUPERFAMILY SSF55785 11 101 1.29E-5 T 22-04-2016 IPR000014 PAS domain LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 PANTHER PTHR24423 11 349 3.9E-176 T 22-04-2016 LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 SMART SM00387 233 349 5.6E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 SUPERFAMILY SSF47384 121 186 8.63E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 2.9E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS19205 e6141ecb5129357b83c40b50732bcb08 349 Gene3D G3DSA:1.10.287.130 129 186 3.6E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS18475 fb1c6d2e0f1a6a9db2d81d21b26917c2 120 SUPERFAMILY SSF140566 12 74 2.22E-5 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LK04_RS18475 fb1c6d2e0f1a6a9db2d81d21b26917c2 120 Gene3D G3DSA:1.20.58.300 11 84 1.7E-4 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LK04_RS18475 fb1c6d2e0f1a6a9db2d81d21b26917c2 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 118 8.5E-33 T 22-04-2016 IPR021230 Protein of unknown function DUF2810 LK04_RS04805 fc9386f879211e73369925aaee66c668 241 Gene3D G3DSA:2.40.50.40 137 202 4.3E-23 T 22-04-2016 LK04_RS04805 fc9386f879211e73369925aaee66c668 241 Pfam PF00072 Response regulator receiver domain 4 112 4.3E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS04805 fc9386f879211e73369925aaee66c668 241 PANTHER PTHR26402 1 180 6.1E-43 T 22-04-2016 LK04_RS04805 fc9386f879211e73369925aaee66c668 241 SUPERFAMILY SSF52172 2 129 1.12E-25 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS04805 fc9386f879211e73369925aaee66c668 241 Gene3D G3DSA:3.40.50.2300 3 126 3.9E-28 T 22-04-2016 LK04_RS04805 fc9386f879211e73369925aaee66c668 241 PANTHER PTHR26402:SF472 1 180 6.1E-43 T 22-04-2016 LK04_RS04805 fc9386f879211e73369925aaee66c668 241 SMART SM00850 142 240 3.4E-36 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 LK04_RS04805 fc9386f879211e73369925aaee66c668 241 SMART SM00448 1 112 8.6E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS04805 fc9386f879211e73369925aaee66c668 241 Gene3D G3DSA:2.20.25.10 203 241 1.3E-12 T 22-04-2016 LK04_RS04805 fc9386f879211e73369925aaee66c668 241 Pfam PF04397 LytTr DNA-binding domain 143 239 2.3E-31 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 Gene3D G3DSA:3.50.50.60 2 173 7.7E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 Gene3D G3DSA:3.50.50.60 265 342 7.7E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 SUPERFAMILY SSF51905 1 167 5.83E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 SUPERFAMILY SSF51905 264 358 5.83E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 PANTHER PTHR13789 1 343 7.7E-83 T 22-04-2016 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 1.2E-17 T 22-04-2016 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 1.2E-17 T 22-04-2016 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.2E-17 T 22-04-2016 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 1.2E-17 T 22-04-2016 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 Pfam PF01494 FAD binding domain 2 338 9.4E-29 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 LK04_RS08805 38343ace5a2658eb805558b05e1a3948 385 PANTHER PTHR13789:SF186 1 343 7.7E-83 T 22-04-2016 LK04_RS04625 f73c1bb543664bf8930c175518b8c333 290 PANTHER PTHR30406:SF1 1 283 4.3E-156 T 22-04-2016 LK04_RS04625 f73c1bb543664bf8930c175518b8c333 290 PANTHER PTHR30406 1 283 4.3E-156 T 22-04-2016 LK04_RS04625 f73c1bb543664bf8930c175518b8c333 290 Gene3D G3DSA:1.10.3720.10 19 280 1.7E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04625 f73c1bb543664bf8930c175518b8c333 290 SUPERFAMILY SSF161098 16 268 1.03E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04625 f73c1bb543664bf8930c175518b8c333 290 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 277 5.2E-112 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 LK04_RS04625 f73c1bb543664bf8930c175518b8c333 290 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 275 5.7E-106 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 LK04_RS04625 f73c1bb543664bf8930c175518b8c333 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 269 1.6E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19495 be5198b3b079bcff7d5b778ab8131cd5 84 Gene3D G3DSA:3.40.30.10 1 73 1.5E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS19495 be5198b3b079bcff7d5b778ab8131cd5 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 LK04_RS19495 be5198b3b079bcff7d5b778ab8131cd5 84 Pfam PF00462 Glutaredoxin 4 63 2.6E-24 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LK04_RS19495 be5198b3b079bcff7d5b778ab8131cd5 84 PANTHER PTHR10168 4 84 5.0E-28 T 22-04-2016 LK04_RS19495 be5198b3b079bcff7d5b778ab8131cd5 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 1.7E-36 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 LK04_RS19495 be5198b3b079bcff7d5b778ab8131cd5 84 SUPERFAMILY SSF52833 1 83 7.41E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS19495 be5198b3b079bcff7d5b778ab8131cd5 84 PRINTS PR00160 Glutaredoxin signature 4 22 4.5E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup LK04_RS19495 be5198b3b079bcff7d5b778ab8131cd5 84 PRINTS PR00160 Glutaredoxin signature 60 73 4.5E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup LK04_RS19495 be5198b3b079bcff7d5b778ab8131cd5 84 PRINTS PR00160 Glutaredoxin signature 46 59 4.5E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 8 398 2.4E-95 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 SUPERFAMILY SSF55031 211 321 4.71E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 PANTHER PTHR11014 135 408 1.6E-148 T 22-04-2016 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 PANTHER PTHR11014 7 95 1.6E-148 T 22-04-2016 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 SUPERFAMILY SSF53187 8 212 1.83E-72 T 22-04-2016 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 SUPERFAMILY SSF53187 324 406 1.83E-72 T 22-04-2016 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 PIRSF PIRSF037215 5 408 1.0E-142 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 Gene3D G3DSA:3.30.70.360 212 321 2.8E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 PANTHER PTHR11014:SF3 135 408 1.6E-148 T 22-04-2016 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 PANTHER PTHR11014:SF3 7 95 1.6E-148 T 22-04-2016 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 Pfam PF01546 Peptidase family M20/M25/M40 143 402 8.3E-11 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 Gene3D G3DSA:3.40.630.10 324 407 3.2E-95 T 22-04-2016 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 Gene3D G3DSA:3.40.630.10 8 211 3.2E-95 T 22-04-2016 LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 Pfam PF07687 Peptidase dimerisation domain 208 307 4.4E-8 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS08620 767a3c69fc53be09fdad19d622b75818 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 177 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LK04_RS04820 4a9418dcbb41023c0cbb78da9b552701 174 Gene3D G3DSA:3.40.630.30 3 172 2.2E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS04820 4a9418dcbb41023c0cbb78da9b552701 174 PANTHER PTHR13256:SF10 1 173 9.2E-32 T 22-04-2016 LK04_RS04820 4a9418dcbb41023c0cbb78da9b552701 174 Pfam PF13302 Acetyltransferase (GNAT) domain 7 146 5.7E-22 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS04820 4a9418dcbb41023c0cbb78da9b552701 174 PANTHER PTHR13256 1 173 9.2E-32 T 22-04-2016 LK04_RS04820 4a9418dcbb41023c0cbb78da9b552701 174 SUPERFAMILY SSF55729 2 170 5.87E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 Gene3D G3DSA:1.10.601.10 14 122 5.0E-34 T 22-04-2016 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.404 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 8.1E-129 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 Pfam PF04545 Sigma-70, region 4 229 280 1.7E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 Gene3D G3DSA:1.10.10.10 224 282 9.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 Pfam PF04542 Sigma-70 region 2 53 122 8.8E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 SUPERFAMILY SSF88946 15 122 9.16E-39 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 PANTHER PTHR30376 2 284 1.5E-126 T 22-04-2016 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 SUPERFAMILY SSF88659 200 284 3.36E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 PIRSF PIRSF000770 8 285 5.1E-35 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 1.0E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS17500 08ce0ebe7ae5cac96deb5a01a3ae9d4d 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 SUPERFAMILY SSF47831 23 143 4.97E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 PIRSF PIRSF000732 1 574 1.4E-218 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 223 5.5E-24 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 Gene3D G3DSA:3.20.20.60 256 572 1.2E-116 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 4.1E-124 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.7E-29 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 1.3E-30 T 22-04-2016 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 1.3E-30 T 22-04-2016 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 1.3E-30 T 22-04-2016 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 1.3E-30 T 22-04-2016 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 1.5E-256 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 Gene3D G3DSA:1.10.274.10 23 132 1.8E-37 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 SUPERFAMILY SSF52009 125 246 1.06E-37 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 PANTHER PTHR22931 66 550 1.5E-218 T 22-04-2016 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 Gene3D G3DSA:3.50.30.10 133 255 4.8E-43 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 SUPERFAMILY SSF51621 250 549 2.04E-109 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS04655 ff1b6c509132d55efc9e1d284f366a19 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LK04_RS15775 9b9a2d47a3c32c3b5693b48ec29a3ca2 163 SUPERFAMILY SSF141452 2 160 2.22E-43 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp LK04_RS15775 9b9a2d47a3c32c3b5693b48ec29a3ca2 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.2E-35 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp LK04_RS15775 9b9a2d47a3c32c3b5693b48ec29a3ca2 163 Gene3D G3DSA:2.30.110.20 1 159 3.2E-33 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp LK04_RS15775 9b9a2d47a3c32c3b5693b48ec29a3ca2 163 PANTHER PTHR34319:SF2 1 163 1.8E-123 T 22-04-2016 LK04_RS15775 9b9a2d47a3c32c3b5693b48ec29a3ca2 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 7.2E-50 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp LK04_RS15775 9b9a2d47a3c32c3b5693b48ec29a3ca2 163 PANTHER PTHR34319 1 163 1.8E-123 T 22-04-2016 LK04_RS02405 6be030ef6d8cac31aa8898e5208b8023 362 SUPERFAMILY SSF53659 2 352 1.08E-112 T 22-04-2016 LK04_RS02405 6be030ef6d8cac31aa8898e5208b8023 362 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 348 1.8E-85 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS02405 6be030ef6d8cac31aa8898e5208b8023 362 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LK04_RS02405 6be030ef6d8cac31aa8898e5208b8023 362 Gene3D G3DSA:3.40.718.10 1 352 3.6E-117 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS02405 6be030ef6d8cac31aa8898e5208b8023 362 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 351 2.4E-179 T 22-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 LK04_RS02405 6be030ef6d8cac31aa8898e5208b8023 362 PANTHER PTHR11835:SF33 2 360 2.4E-219 T 22-04-2016 LK04_RS02405 6be030ef6d8cac31aa8898e5208b8023 362 SMART SM01329 5 348 9.0E-168 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS02405 6be030ef6d8cac31aa8898e5208b8023 362 PANTHER PTHR11835 2 360 2.4E-219 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LK04_RS11050 d311129659edbaa3f26c77579dff091a 307 Gene3D G3DSA:3.40.50.10740 6 160 4.7E-41 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain LK04_RS11050 d311129659edbaa3f26c77579dff091a 307 Gene3D G3DSA:3.50.30.60 170 297 8.2E-44 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain LK04_RS11050 d311129659edbaa3f26c77579dff091a 307 Pfam PF02016 LD-carboxypeptidase 7 289 2.7E-71 T 22-04-2016 IPR003507 Peptidase family S66 LK04_RS11050 d311129659edbaa3f26c77579dff091a 307 SUPERFAMILY SSF52317 6 161 3.34E-34 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS11050 d311129659edbaa3f26c77579dff091a 307 PANTHER PTHR30237 7 307 5.6E-96 T 22-04-2016 LK04_RS11050 d311129659edbaa3f26c77579dff091a 307 PIRSF PIRSF028757 1 304 2.5E-75 T 22-04-2016 IPR003507 Peptidase family S66 LK04_RS11050 d311129659edbaa3f26c77579dff091a 307 PANTHER PTHR30237:SF2 7 307 5.6E-96 T 22-04-2016 LK04_RS11050 d311129659edbaa3f26c77579dff091a 307 SUPERFAMILY SSF141986 142 294 2.75E-42 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain LK04_RS10740 32b1dc7758a5ad4702e73fa1a2135c8b 420 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 350 5.9E-11 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS10740 32b1dc7758a5ad4702e73fa1a2135c8b 420 Pfam PF13438 Domain of unknown function (DUF4113) 370 419 3.3E-20 T 22-04-2016 IPR025188 Domain of unknown function DUF4113 LK04_RS10740 32b1dc7758a5ad4702e73fa1a2135c8b 420 Gene3D G3DSA:1.10.150.20 167 238 5.4E-20 T 22-04-2016 LK04_RS10740 32b1dc7758a5ad4702e73fa1a2135c8b 420 Gene3D G3DSA:3.30.70.270 66 157 2.4E-24 T 22-04-2016 LK04_RS10740 32b1dc7758a5ad4702e73fa1a2135c8b 420 PANTHER PTHR11076 1 397 1.7E-187 T 22-04-2016 LK04_RS10740 32b1dc7758a5ad4702e73fa1a2135c8b 420 SUPERFAMILY SSF56672 1 236 6.32E-68 T 22-04-2016 LK04_RS10740 32b1dc7758a5ad4702e73fa1a2135c8b 420 PANTHER PTHR11076:SF40 1 397 1.7E-187 T 22-04-2016 LK04_RS10740 32b1dc7758a5ad4702e73fa1a2135c8b 420 Pfam PF00817 impB/mucB/samB family 5 150 1.2E-35 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS10740 32b1dc7758a5ad4702e73fa1a2135c8b 420 Gene3D G3DSA:3.30.1490.100 248 351 1.6E-5 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS10740 32b1dc7758a5ad4702e73fa1a2135c8b 420 SUPERFAMILY SSF100879 248 339 6.54E-6 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS19245 1032885d55be5bf417e74aa341cc8189 458 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 371 391 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LK04_RS19245 1032885d55be5bf417e74aa341cc8189 458 PANTHER PTHR11119 9 458 9.5E-278 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS19245 1032885d55be5bf417e74aa341cc8189 458 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 25 453 2.2E-139 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LK04_RS19245 1032885d55be5bf417e74aa341cc8189 458 Pfam PF00860 Permease family 30 422 3.3E-108 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS19245 1032885d55be5bf417e74aa341cc8189 458 PANTHER PTHR11119:SF44 9 458 9.5E-278 T 22-04-2016 LK04_RS15265 9f873bb43277a40df58b1b7008a5996f 302 Gene3D G3DSA:3.40.190.10 98 182 7.0E-18 T 22-04-2016 LK04_RS15265 9f873bb43277a40df58b1b7008a5996f 302 Gene3D G3DSA:3.40.190.10 183 265 1.2E-11 T 22-04-2016 LK04_RS15265 9f873bb43277a40df58b1b7008a5996f 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.3E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS15265 9f873bb43277a40df58b1b7008a5996f 302 PANTHER PTHR30537 1 296 7.1E-108 T 22-04-2016 LK04_RS15265 9f873bb43277a40df58b1b7008a5996f 302 Gene3D G3DSA:1.10.10.10 7 89 2.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15265 9f873bb43277a40df58b1b7008a5996f 302 Pfam PF03466 LysR substrate binding domain 92 296 1.4E-42 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS15265 9f873bb43277a40df58b1b7008a5996f 302 SUPERFAMILY SSF53850 93 296 3.26E-45 T 22-04-2016 LK04_RS15265 9f873bb43277a40df58b1b7008a5996f 302 PANTHER PTHR30537:SF28 1 296 7.1E-108 T 22-04-2016 LK04_RS15265 9f873bb43277a40df58b1b7008a5996f 302 SUPERFAMILY SSF46785 7 92 3.16E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14035 bb0497c65193234942e10dfee998a546 346 PANTHER PTHR11695 21 345 4.4E-141 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS14035 bb0497c65193234942e10dfee998a546 346 PANTHER PTHR11695:SF280 21 345 4.4E-141 T 22-04-2016 LK04_RS14035 bb0497c65193234942e10dfee998a546 346 SUPERFAMILY SSF51735 146 313 6.2E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS14035 bb0497c65193234942e10dfee998a546 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 68 82 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LK04_RS14035 bb0497c65193234942e10dfee998a546 346 Gene3D G3DSA:3.90.180.10 2 176 2.3E-70 T 22-04-2016 IPR011032 GroES-like LK04_RS14035 bb0497c65193234942e10dfee998a546 346 SMART SM00829 18 342 1.9E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS14035 bb0497c65193234942e10dfee998a546 346 SUPERFAMILY SSF50129 1 188 2.43E-57 T 22-04-2016 IPR011032 GroES-like LK04_RS14035 bb0497c65193234942e10dfee998a546 346 Gene3D G3DSA:3.40.50.720 177 292 2.6E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS14035 bb0497c65193234942e10dfee998a546 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 139 7.8E-33 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS14035 bb0497c65193234942e10dfee998a546 346 Pfam PF00107 Zinc-binding dehydrogenase 183 306 1.3E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 Gene3D G3DSA:2.40.50.140 287 343 9.2E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 Pfam PF08402 TOBE domain 282 355 2.5E-6 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 Gene3D G3DSA:3.40.50.300 5 238 2.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 PANTHER PTHR24220 5 246 2.9E-146 T 22-04-2016 LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 SMART SM00382 28 211 4.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 SUPERFAMILY SSF50331 236 361 2.38E-20 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 Gene3D G3DSA:2.40.50.100 239 286 2.6E-16 T 22-04-2016 LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 Gene3D G3DSA:2.40.50.100 349 363 2.6E-16 T 22-04-2016 LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 SUPERFAMILY SSF52540 4 242 1.15E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 Pfam PF00005 ABC transporter 20 161 1.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS16985 93c37c9343ad02e0468cf5648fa5ac88 363 PANTHER PTHR24220:SF151 5 246 2.9E-146 T 22-04-2016 LK04_RS19375 805d939572499bed1d8f2a20dc71696c 406 Gene3D G3DSA:3.40.50.10300 185 404 1.0E-87 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 LK04_RS19375 805d939572499bed1d8f2a20dc71696c 406 SUPERFAMILY SSF52507 4 180 7.19E-61 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LK04_RS19375 805d939572499bed1d8f2a20dc71696c 406 Gene3D G3DSA:3.40.50.1950 5 179 3.6E-63 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LK04_RS19375 805d939572499bed1d8f2a20dc71696c 406 SUPERFAMILY SSF102645 185 402 6.93E-79 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 LK04_RS19375 805d939572499bed1d8f2a20dc71696c 406 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 397 3.7E-158 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 LK04_RS19375 805d939572499bed1d8f2a20dc71696c 406 Pfam PF02441 Flavoprotein 7 135 5.7E-33 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LK04_RS19375 805d939572499bed1d8f2a20dc71696c 406 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 371 3.7E-74 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 LK04_RS19375 805d939572499bed1d8f2a20dc71696c 406 PANTHER PTHR14359 4 406 2.9E-200 T 22-04-2016 LK04_RS19375 805d939572499bed1d8f2a20dc71696c 406 PANTHER PTHR14359:SF20 4 406 2.9E-200 T 22-04-2016 LK04_RS03865 fa98567e6f0b9fc7af220f7ec50eb55f 261 PANTHER PTHR24220:SF10 7 225 9.8E-96 T 22-04-2016 LK04_RS03865 fa98567e6f0b9fc7af220f7ec50eb55f 261 Gene3D G3DSA:3.40.50.300 6 224 4.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03865 fa98567e6f0b9fc7af220f7ec50eb55f 261 Pfam PF00005 ABC transporter 26 165 1.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS03865 fa98567e6f0b9fc7af220f7ec50eb55f 261 PANTHER PTHR24220 7 225 9.8E-96 T 22-04-2016 LK04_RS03865 fa98567e6f0b9fc7af220f7ec50eb55f 261 SMART SM00382 35 214 3.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS03865 fa98567e6f0b9fc7af220f7ec50eb55f 261 SUPERFAMILY SSF52540 7 234 7.56E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14385 a8d3f1c6b602feb95901f7cffe9ab648 142 Pfam PF02566 OsmC-like protein 42 137 8.3E-21 T 22-04-2016 IPR003718 OsmC/Ohr family LK04_RS14385 a8d3f1c6b602feb95901f7cffe9ab648 142 PANTHER PTHR33797 1 142 6.0E-66 T 22-04-2016 LK04_RS14385 a8d3f1c6b602feb95901f7cffe9ab648 142 SUPERFAMILY SSF82784 1 140 2.22E-41 T 22-04-2016 IPR003718 OsmC/Ohr family LK04_RS14385 a8d3f1c6b602feb95901f7cffe9ab648 142 PANTHER PTHR33797:SF1 1 142 6.0E-66 T 22-04-2016 LK04_RS14385 a8d3f1c6b602feb95901f7cffe9ab648 142 Gene3D G3DSA:3.30.300.20 3 140 8.4E-54 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LK04_RS14385 a8d3f1c6b602feb95901f7cffe9ab648 142 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 137 1.2E-58 T 22-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 LK04_RS15935 634603dacb87aa670a49ac62fb5b473e 315 Gene3D G3DSA:3.40.50.720 35 108 3.1E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15935 634603dacb87aa670a49ac62fb5b473e 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 283 4.8E-50 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS15935 634603dacb87aa670a49ac62fb5b473e 315 PANTHER PTHR10996 39 312 6.1E-81 T 22-04-2016 LK04_RS15935 634603dacb87aa670a49ac62fb5b473e 315 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LK04_RS15935 634603dacb87aa670a49ac62fb5b473e 315 SUPERFAMILY SSF52283 36 116 1.1E-20 T 22-04-2016 LK04_RS15935 634603dacb87aa670a49ac62fb5b473e 315 SUPERFAMILY SSF51735 98 284 3.67E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15935 634603dacb87aa670a49ac62fb5b473e 315 Gene3D G3DSA:3.40.50.720 109 284 1.9E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15935 634603dacb87aa670a49ac62fb5b473e 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 36 284 2.6E-15 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LK04_RS13710 31c84897beec750c808d15c83c3d65e0 284 Gene3D G3DSA:1.25.40.10 197 284 4.4E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS13710 31c84897beec750c808d15c83c3d65e0 284 Pfam PF14559 Tetratricopeptide repeat 124 190 4.2E-19 T 22-04-2016 LK04_RS13710 31c84897beec750c808d15c83c3d65e0 284 Pfam PF14561 Tetratricopeptide repeat 195 284 9.9E-28 T 22-04-2016 LK04_RS13710 31c84897beec750c808d15c83c3d65e0 284 Pfam PF00085 Thioredoxin 8 108 1.7E-19 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 LK04_RS13710 31c84897beec750c808d15c83c3d65e0 284 PANTHER PTHR10438:SF288 1 134 1.1E-63 T 22-04-2016 LK04_RS13710 31c84897beec750c808d15c83c3d65e0 284 Gene3D G3DSA:1.25.40.10 110 196 5.1E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS13710 31c84897beec750c808d15c83c3d65e0 284 PANTHER PTHR10438 1 134 1.1E-63 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LK04_RS13710 31c84897beec750c808d15c83c3d65e0 284 SUPERFAMILY SSF52833 6 112 4.13E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS13710 31c84897beec750c808d15c83c3d65e0 284 Gene3D G3DSA:3.40.30.10 6 109 1.3E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS13710 31c84897beec750c808d15c83c3d65e0 284 SUPERFAMILY SSF48452 119 240 2.54E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS16535 7fbe43ddde18da90c2b2a79911dd1280 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 136 1.8E-39 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain LK04_RS16535 7fbe43ddde18da90c2b2a79911dd1280 138 SUPERFAMILY SSF54637 4 137 2.89E-28 T 22-04-2016 IPR029069 HotDog domain LK04_RS16535 7fbe43ddde18da90c2b2a79911dd1280 138 Pfam PF03061 Thioesterase superfamily 51 128 3.7E-13 T 22-04-2016 IPR006683 Thioesterase domain LK04_RS16535 7fbe43ddde18da90c2b2a79911dd1280 138 Gene3D G3DSA:3.10.129.10 2 137 3.6E-47 T 22-04-2016 IPR029069 HotDog domain LK04_RS16535 7fbe43ddde18da90c2b2a79911dd1280 138 PANTHER PTHR12418 13 137 1.4E-54 T 22-04-2016 LK04_RS16535 7fbe43ddde18da90c2b2a79911dd1280 138 PANTHER PTHR12418:SF34 13 137 1.4E-54 T 22-04-2016 LK04_RS00940 5d511159576ccdc0e9a1feb1cb245c56 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.983 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LK04_RS00940 5d511159576ccdc0e9a1feb1cb245c56 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LK04_RS00940 5d511159576ccdc0e9a1feb1cb245c56 130 Gene3D G3DSA:3.30.1490.10 74 129 1.0E-28 T 22-04-2016 LK04_RS00940 5d511159576ccdc0e9a1feb1cb245c56 130 Gene3D G3DSA:3.30.1370.30 2 72 1.2E-28 T 22-04-2016 LK04_RS00940 5d511159576ccdc0e9a1feb1cb245c56 130 Pfam PF00410 Ribosomal protein S8 5 129 2.8E-49 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LK04_RS00940 5d511159576ccdc0e9a1feb1cb245c56 130 SUPERFAMILY SSF56047 2 129 6.41E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LK04_RS00940 5d511159576ccdc0e9a1feb1cb245c56 130 PANTHER PTHR11758 1 130 7.3E-65 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LK04_RS06910 7d2ec04775d013c2b6a77a12cc60f134 131 Pfam PF04347 Flagellar biosynthesis protein, FliO 42 124 7.5E-19 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 LK04_RS06910 7d2ec04775d013c2b6a77a12cc60f134 131 PANTHER PTHR38766:SF1 18 129 9.9E-25 T 22-04-2016 LK04_RS06910 7d2ec04775d013c2b6a77a12cc60f134 131 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 30 98 1.5E-19 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 LK04_RS06910 7d2ec04775d013c2b6a77a12cc60f134 131 PANTHER PTHR38766 18 129 9.9E-25 T 22-04-2016 LK04_RS07565 246538a1b3e119f6f9c934a02b2a3daf 202 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 1.2E-46 T 22-04-2016 IPR006521 Tail protein I LK04_RS07565 246538a1b3e119f6f9c934a02b2a3daf 202 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 141 2.9E-51 T 22-04-2016 IPR006521 Tail protein I LK04_RS17180 520397a00cc9e629775c3a74137dd99f 383 SUPERFAMILY SSF46689 10 118 1.63E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17180 520397a00cc9e629775c3a74137dd99f 383 SUPERFAMILY SSF53098 138 305 2.78E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS17180 520397a00cc9e629775c3a74137dd99f 383 Pfam PF13565 Homeodomain-like domain 38 114 1.5E-10 T 22-04-2016 LK04_RS17180 520397a00cc9e629775c3a74137dd99f 383 Gene3D G3DSA:3.30.420.10 138 299 7.3E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS17180 520397a00cc9e629775c3a74137dd99f 383 Pfam PF00665 Integrase core domain 140 259 1.7E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS17180 520397a00cc9e629775c3a74137dd99f 383 Gene3D G3DSA:1.10.10.60 17 60 2.9E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS03200 8ee7554c2f5b0be737d677ab38dfaf62 177 PANTHER PTHR23114 1 168 1.9E-69 T 22-04-2016 LK04_RS03200 8ee7554c2f5b0be737d677ab38dfaf62 177 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.613 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH LK04_RS03200 8ee7554c2f5b0be737d677ab38dfaf62 177 Gene3D G3DSA:3.90.79.10 3 151 1.1E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS03200 8ee7554c2f5b0be737d677ab38dfaf62 177 Pfam PF00293 NUDIX domain 7 146 1.1E-27 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS03200 8ee7554c2f5b0be737d677ab38dfaf62 177 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.0E-7 T 22-04-2016 IPR020476 NUDIX hydrolase LK04_RS03200 8ee7554c2f5b0be737d677ab38dfaf62 177 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.0E-7 T 22-04-2016 IPR020476 NUDIX hydrolase LK04_RS03200 8ee7554c2f5b0be737d677ab38dfaf62 177 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LK04_RS03200 8ee7554c2f5b0be737d677ab38dfaf62 177 SUPERFAMILY SSF55811 6 152 1.76E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS14780 f1f0a725de4683ac14e15689147db097 251 SUPERFAMILY SSF56281 1 251 3.54E-68 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS14780 f1f0a725de4683ac14e15689147db097 251 PANTHER PTHR11935:SF7 1 251 5.4E-93 T 22-04-2016 LK04_RS14780 f1f0a725de4683ac14e15689147db097 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.022 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 LK04_RS14780 f1f0a725de4683ac14e15689147db097 251 PANTHER PTHR11935 1 251 5.4E-93 T 22-04-2016 LK04_RS14780 f1f0a725de4683ac14e15689147db097 251 PIRSF PIRSF005457 1 251 8.1E-88 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 LK04_RS14780 f1f0a725de4683ac14e15689147db097 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 1.5E-102 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 LK04_RS14780 f1f0a725de4683ac14e15689147db097 251 SMART SM00849 11 165 4.5E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS14780 f1f0a725de4683ac14e15689147db097 251 Pfam PF00753 Metallo-beta-lactamase superfamily 16 165 3.5E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS14780 f1f0a725de4683ac14e15689147db097 251 Gene3D G3DSA:3.60.15.10 4 251 1.2E-84 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS14780 f1f0a725de4683ac14e15689147db097 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 3.0E-23 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 LK04_RS11855 9d562427d4fbc96e95a65999fc52d049 209 PANTHER PTHR36121 1 209 5.9E-37 T 22-04-2016 LK04_RS11855 9d562427d4fbc96e95a65999fc52d049 209 PANTHER PTHR36121:SF1 1 209 5.9E-37 T 22-04-2016 LK04_RS11855 9d562427d4fbc96e95a65999fc52d049 209 Pfam PF04994 TfoX C-terminal domain 117 193 1.7E-21 T 22-04-2016 IPR007077 TfoX, C-terminal LK04_RS11855 9d562427d4fbc96e95a65999fc52d049 209 SUPERFAMILY SSF159894 11 106 5.49E-24 T 22-04-2016 LK04_RS11855 9d562427d4fbc96e95a65999fc52d049 209 Gene3D G3DSA:3.30.1460.30 7 106 1.6E-29 T 22-04-2016 IPR007076 TfoX, N-terminal LK04_RS11855 9d562427d4fbc96e95a65999fc52d049 209 Pfam PF04993 TfoX N-terminal domain 14 105 1.9E-26 T 22-04-2016 IPR007076 TfoX, N-terminal LK04_RS11855 9d562427d4fbc96e95a65999fc52d049 209 PIRSF PIRSF028788 1 205 1.2E-53 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type LK04_RS11855 9d562427d4fbc96e95a65999fc52d049 209 Gene3D G3DSA:1.10.150.20 117 196 1.5E-24 T 22-04-2016 LK04_RS16635 179ce283f5171de539e6ff6164c68470 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 9.5E-34 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LK04_RS16635 179ce283f5171de539e6ff6164c68470 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 93 9.4E-26 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LK04_RS16635 179ce283f5171de539e6ff6164c68470 95 Gene3D G3DSA:3.30.160.100 1 95 3.5E-36 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LK04_RS16635 179ce283f5171de539e6ff6164c68470 95 SUPERFAMILY SSF69754 2 95 8.11E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LK04_RS16635 179ce283f5171de539e6ff6164c68470 95 PANTHER PTHR33231 1 95 2.0E-38 T 22-04-2016 LK04_RS09325 0c806a0b0755652107585f327c107050 430 Gene3D G3DSA:1.10.3290.10 102 340 7.5E-42 T 22-04-2016 IPR003812 Fido domain LK04_RS09325 0c806a0b0755652107585f327c107050 430 PANTHER PTHR13504 28 430 5.4E-42 T 22-04-2016 LK04_RS09325 0c806a0b0755652107585f327c107050 430 Gene3D G3DSA:1.10.10.10 375 429 1.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09325 0c806a0b0755652107585f327c107050 430 SUPERFAMILY SSF140931 157 336 8.63E-25 T 22-04-2016 IPR003812 Fido domain LK04_RS09325 0c806a0b0755652107585f327c107050 430 Pfam PF02661 Fic/DOC family 169 273 4.7E-17 T 22-04-2016 IPR003812 Fido domain LK04_RS09325 0c806a0b0755652107585f327c107050 430 PANTHER PTHR13504:SF32 28 430 5.4E-42 T 22-04-2016 LK04_RS08965 634a8a55a5dc639ffab60b87ef2f078d 315 Gene3D G3DSA:3.40.50.2300 31 146 3.2E-24 T 22-04-2016 LK04_RS08965 634a8a55a5dc639ffab60b87ef2f078d 315 PANTHER PTHR32196:SF9 29 285 1.7E-66 T 22-04-2016 LK04_RS08965 634a8a55a5dc639ffab60b87ef2f078d 315 Pfam PF13407 Periplasmic binding protein domain 31 284 8.2E-53 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS08965 634a8a55a5dc639ffab60b87ef2f078d 315 PANTHER PTHR32196 29 285 1.7E-66 T 22-04-2016 LK04_RS08965 634a8a55a5dc639ffab60b87ef2f078d 315 Gene3D G3DSA:3.40.50.2300 147 307 7.7E-52 T 22-04-2016 LK04_RS08965 634a8a55a5dc639ffab60b87ef2f078d 315 SUPERFAMILY SSF53822 30 307 2.94E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS08725 bd9989b8fc1b520f54aa4a6b927fa73e 234 PIRSF PIRSF006755 1 225 3.2E-58 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS08725 bd9989b8fc1b520f54aa4a6b927fa73e 234 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 171 1.6E-36 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS08725 bd9989b8fc1b520f54aa4a6b927fa73e 234 PANTHER PTHR21343:SF12 4 219 9.9E-120 T 22-04-2016 LK04_RS08725 bd9989b8fc1b520f54aa4a6b927fa73e 234 PANTHER PTHR21343 4 219 9.9E-120 T 22-04-2016 LK04_RS08725 bd9989b8fc1b520f54aa4a6b927fa73e 234 Pfam PF13500 AAA domain 3 206 6.6E-28 T 22-04-2016 LK04_RS08725 bd9989b8fc1b520f54aa4a6b927fa73e 234 Gene3D G3DSA:3.40.50.300 1 210 2.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08725 bd9989b8fc1b520f54aa4a6b927fa73e 234 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 211 23.022 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS08725 bd9989b8fc1b520f54aa4a6b927fa73e 234 SUPERFAMILY SSF52540 1 213 4.25E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14730 c68dcbb2dafc822dfa78fc3020928a11 465 PANTHER PTHR11895:SF74 1 461 1.9E-233 T 22-04-2016 LK04_RS14730 c68dcbb2dafc822dfa78fc3020928a11 465 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 10 455 4.8E-211 T 22-04-2016 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169|UniPathway: UPA00008 LK04_RS14730 c68dcbb2dafc822dfa78fc3020928a11 465 Gene3D G3DSA:3.90.1300.10 2 453 3.0E-132 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS14730 c68dcbb2dafc822dfa78fc3020928a11 465 SUPERFAMILY SSF75304 2 453 8.24E-129 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS14730 c68dcbb2dafc822dfa78fc3020928a11 465 Pfam PF01425 Amidase 24 443 9.2E-101 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS14730 c68dcbb2dafc822dfa78fc3020928a11 465 PANTHER PTHR11895 1 461 1.9E-233 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LK04_RS00075 1dcf19c7663668efca5a25a7d4673ed6 275 SUPERFAMILY SSF52540 2 245 1.14E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00075 1dcf19c7663668efca5a25a7d4673ed6 275 PANTHER PTHR24220 4 265 3.9E-106 T 22-04-2016 LK04_RS00075 1dcf19c7663668efca5a25a7d4673ed6 275 SMART SM00382 30 237 3.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS00075 1dcf19c7663668efca5a25a7d4673ed6 275 Gene3D G3DSA:3.40.50.300 2 251 3.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00075 1dcf19c7663668efca5a25a7d4673ed6 275 PANTHER PTHR24220:SF586 4 265 3.9E-106 T 22-04-2016 LK04_RS00075 1dcf19c7663668efca5a25a7d4673ed6 275 Pfam PF00005 ABC transporter 25 180 1.0E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 SUPERFAMILY SSF51306 78 322 2.41E-77 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 PANTHER PTHR12383:SF27 245 307 2.8E-115 T 22-04-2016 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 PANTHER PTHR12383:SF27 3 175 2.8E-115 T 22-04-2016 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 Gene3D G3DSA:2.170.230.10 155 262 1.5E-38 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 240 304 4.0E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 168 2.7E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 1.6E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 263 282 1.6E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 1.6E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 Pfam PF10502 Signal peptidase, peptidase S26 259 301 3.1E-7 T 22-04-2016 IPR019533 Peptidase S26 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 Gene3D G3DSA:2.10.109.10 76 154 1.0E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 Gene3D G3DSA:2.10.109.10 263 309 1.0E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 Pfam PF00717 Peptidase S24-like 86 168 1.2E-21 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 PANTHER PTHR12383 245 307 2.8E-115 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 PANTHER PTHR12383 3 175 2.8E-115 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LK04_RS04025 9239222843516cf5584b2a22d9036ec3 323 ProSitePatterns PS00761 Signal peptidases I signature 3. 268 281 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 SUPERFAMILY SSF56024 4 168 1.01E-37 T 22-04-2016 LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 Gene3D G3DSA:3.30.870.10 3 170 6.1E-38 T 22-04-2016 LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 Gene3D G3DSA:3.30.870.10 208 365 1.5E-33 T 22-04-2016 LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 PANTHER PTHR21248 1 381 5.3E-99 T 22-04-2016 LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 384 51.238 T 22-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 SUPERFAMILY SSF56024 184 347 4.04E-37 T 22-04-2016 LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 SMART SM00155 108 135 2.5E-7 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 SMART SM00155 290 313 53.0 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 Pfam PF13091 PLD-like domain 26 166 7.3E-14 T 22-04-2016 IPR025202 Phospholipase D-like domain LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 Pfam PF13091 PLD-like domain 214 340 3.0E-25 T 22-04-2016 IPR025202 Phospholipase D-like domain LK04_RS12815 2f239e02f66507ed773019378f8dc09c 414 PANTHER PTHR21248:SF5 1 381 5.3E-99 T 22-04-2016 LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.02 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 Pfam PF01202 Shikimate kinase 11 168 1.1E-45 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 SUPERFAMILY SSF52540 3 169 3.94E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 PANTHER PTHR21087:SF9 1 169 1.7E-77 T 22-04-2016 LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 PRINTS PR01100 Shikimate kinase family signature 74 83 3.4E-20 T 22-04-2016 LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 PRINTS PR01100 Shikimate kinase family signature 29 42 3.4E-20 T 22-04-2016 LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 PRINTS PR01100 Shikimate kinase family signature 5 20 3.4E-20 T 22-04-2016 LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 PRINTS PR01100 Shikimate kinase family signature 57 65 3.4E-20 T 22-04-2016 LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 PRINTS PR01100 Shikimate kinase family signature 95 112 3.4E-20 T 22-04-2016 LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 Gene3D G3DSA:3.40.50.300 2 168 3.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14275 ae982fa98ce5cc5be3bb05dddf02e2e4 174 PANTHER PTHR21087 1 169 1.7E-77 T 22-04-2016 LK04_RS01285 d19848466ed1da8cbbcfe52a81f8a2d2 348 PANTHER PTHR32120 3 343 4.6E-155 T 22-04-2016 LK04_RS01285 d19848466ed1da8cbbcfe52a81f8a2d2 348 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 332 2.4E-88 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 LK04_RS01285 d19848466ed1da8cbbcfe52a81f8a2d2 348 SUPERFAMILY SSF52540 109 338 2.86E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01285 d19848466ed1da8cbbcfe52a81f8a2d2 348 Pfam PF03193 Protein of unknown function, DUF258 95 274 1.4E-53 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 LK04_RS01285 d19848466ed1da8cbbcfe52a81f8a2d2 348 Gene3D G3DSA:1.10.40.50 274 342 1.3E-24 T 22-04-2016 LK04_RS01285 d19848466ed1da8cbbcfe52a81f8a2d2 348 Gene3D G3DSA:3.40.50.300 110 273 4.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01285 d19848466ed1da8cbbcfe52a81f8a2d2 348 PANTHER PTHR32120:SF2 3 343 4.6E-155 T 22-04-2016 LK04_RS01285 d19848466ed1da8cbbcfe52a81f8a2d2 348 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 338 36.853 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 LK04_RS14445 ddaf09335353bfee58557ce760b9a99e 429 PANTHER PTHR35334:SF2 1 429 3.4E-284 T 22-04-2016 LK04_RS14445 ddaf09335353bfee58557ce760b9a99e 429 TIGRFAM TIGR00814 stp: serine transporter 19 418 5.3E-177 T 22-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS14445 ddaf09335353bfee58557ce760b9a99e 429 PANTHER PTHR35334 1 429 3.4E-284 T 22-04-2016 LK04_RS02885 28617b986fb9b87e368dadcd0de9b45b 359 PIRSF PIRSF001359 13 359 1.4E-101 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS02885 28617b986fb9b87e368dadcd0de9b45b 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS02885 28617b986fb9b87e368dadcd0de9b45b 359 PANTHER PTHR30559:SF0 2 359 1.1E-244 T 22-04-2016 LK04_RS02885 28617b986fb9b87e368dadcd0de9b45b 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 2.4E-188 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS02885 28617b986fb9b87e368dadcd0de9b45b 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 3.8E-116 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS02885 28617b986fb9b87e368dadcd0de9b45b 359 Gene3D G3DSA:3.20.20.70 11 356 1.2E-123 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS02885 28617b986fb9b87e368dadcd0de9b45b 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 5.3E-88 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS02885 28617b986fb9b87e368dadcd0de9b45b 359 SUPERFAMILY SSF51569 4 357 6.41E-132 T 22-04-2016 LK04_RS02885 28617b986fb9b87e368dadcd0de9b45b 359 PANTHER PTHR30559 2 359 1.1E-244 T 22-04-2016 LK04_RS02885 28617b986fb9b87e368dadcd0de9b45b 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS18720 4adbb14a780044c1dac6e40e8efc8a48 170 PANTHER PTHR30466 3 168 5.6E-41 T 22-04-2016 LK04_RS18720 4adbb14a780044c1dac6e40e8efc8a48 170 SUPERFAMILY SSF50475 11 169 5.4E-43 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS18720 4adbb14a780044c1dac6e40e8efc8a48 170 PANTHER PTHR30466:SF7 3 168 5.6E-41 T 22-04-2016 LK04_RS18720 4adbb14a780044c1dac6e40e8efc8a48 170 Gene3D G3DSA:2.30.110.10 10 167 5.3E-48 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS18720 4adbb14a780044c1dac6e40e8efc8a48 170 Pfam PF01613 Flavin reductase like domain 21 168 2.7E-34 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LK04_RS18720 4adbb14a780044c1dac6e40e8efc8a48 170 SMART SM00903 21 167 1.8E-49 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 419 440 - T 22-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 Pfam PF13360 PQQ-like domain 192 262 1.3E-4 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 PANTHER PTHR32303:SF4 134 271 7.5E-149 T 22-04-2016 LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 PANTHER PTHR32303:SF4 593 810 7.5E-149 T 22-04-2016 LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 PANTHER PTHR32303:SF4 287 523 7.5E-149 T 22-04-2016 LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 Pfam PF01011 PQQ enzyme repeat 375 402 1.8E-4 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 Pfam PF01011 PQQ enzyme repeat 737 774 6.5E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 Pfam PF01011 PQQ enzyme repeat 452 483 7.3E-8 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 18 809 0.0 T 22-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 PANTHER PTHR32303 134 271 7.5E-149 T 22-04-2016 LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 PANTHER PTHR32303 593 810 7.5E-149 T 22-04-2016 LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 PANTHER PTHR32303 287 523 7.5E-149 T 22-04-2016 LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 SMART SM00564 353 395 71.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 SMART SM00564 423 473 100.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 SMART SM00564 731 764 8.0E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 SMART SM00564 225 256 2.2 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 SMART SM00564 496 528 150.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 SMART SM00564 664 703 140.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 SUPERFAMILY SSF50998 574 795 6.28E-143 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 SUPERFAMILY SSF50998 167 537 6.28E-143 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 Gene3D G3DSA:2.140.10.10 161 549 1.8E-142 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LK04_RS04225 f7fec1d79f7f6bfee17dd84aaadef1b1 812 Gene3D G3DSA:2.140.10.10 585 810 1.8E-142 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.1E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.1E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.1E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 6.6E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 PANTHER PTHR15893 1 85 1.0E-51 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-17 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 Pfam PF01016 Ribosomal L27 protein 2 82 3.6E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 SUPERFAMILY SSF110324 2 82 1.71E-34 T 22-04-2016 LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.271 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS16545 5ec6f8e5b097afc981492240cdee5bda 85 Gene3D G3DSA:2.40.50.100 20 82 1.5E-31 T 22-04-2016 LK04_RS14715 495cf5a42c8d2285142a4fd580050624 279 SUPERFAMILY SSF46689 2 79 2.87E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS14715 495cf5a42c8d2285142a4fd580050624 279 PANTHER PTHR30514 1 270 1.5E-92 T 22-04-2016 LK04_RS14715 495cf5a42c8d2285142a4fd580050624 279 Gene3D G3DSA:3.40.50.10490 65 252 4.9E-13 T 22-04-2016 LK04_RS14715 495cf5a42c8d2285142a4fd580050624 279 Gene3D G3DSA:1.10.10.10 2 64 2.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14715 495cf5a42c8d2285142a4fd580050624 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 71 4.2E-14 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LK04_RS14715 495cf5a42c8d2285142a4fd580050624 279 SUPERFAMILY SSF53697 95 253 1.85E-14 T 22-04-2016 LK04_RS14715 495cf5a42c8d2285142a4fd580050624 279 Pfam PF01380 SIS domain 126 249 5.3E-10 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS14715 495cf5a42c8d2285142a4fd580050624 279 PANTHER PTHR30514:SF4 1 270 1.5E-92 T 22-04-2016 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 639 0.0025 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 695 1.5E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 742 33.618 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 Gene3D G3DSA:3.90.199.10 334 398 6.5E-106 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 Gene3D G3DSA:3.90.199.10 31 238 6.5E-106 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 PANTHER PTHR10169 3 524 0.0 T 22-04-2016 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 SUPERFAMILY SSF56719 32 483 4.05E-154 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 SMART SM00434 12 462 7.1E-232 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 Gene3D G3DSA:3.30.1360.40 239 332 7.7E-25 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 PANTHER PTHR10169:SF30 3 524 0.0 T 22-04-2016 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 741 0.0 T 22-04-2016 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 468 2.2E-134 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 SUPERFAMILY SSF101904 498 732 1.96E-48 T 22-04-2016 LK04_RS02075 4f4a56d7817c71998385fa08c4260bf1 757 Gene3D G3DSA:2.120.10.90 497 704 8.3E-24 T 22-04-2016 LK04_RS10150 6cccd1e894bbc6470a46230f3096ef20 322 Gene3D G3DSA:3.40.50.720 154 277 3.5E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10150 6cccd1e894bbc6470a46230f3096ef20 322 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 100 3.7E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS10150 6cccd1e894bbc6470a46230f3096ef20 322 PANTHER PTHR11695 23 303 1.6E-45 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS10150 6cccd1e894bbc6470a46230f3096ef20 322 PANTHER PTHR11695:SF5 23 303 1.6E-45 T 22-04-2016 LK04_RS10150 6cccd1e894bbc6470a46230f3096ef20 322 SUPERFAMILY SSF50129 8 125 6.76E-24 T 22-04-2016 IPR011032 GroES-like LK04_RS10150 6cccd1e894bbc6470a46230f3096ef20 322 Gene3D G3DSA:3.90.180.10 10 153 8.6E-25 T 22-04-2016 IPR011032 GroES-like LK04_RS10150 6cccd1e894bbc6470a46230f3096ef20 322 SUPERFAMILY SSF51735 120 284 3.84E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18735 c3321f99ecbe6bb1db52a4cecb629687 436 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 3 103 3.5E-32 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 LK04_RS18735 c3321f99ecbe6bb1db52a4cecb629687 436 Pfam PF07805 HipA-like N-terminal domain 151 239 7.3E-20 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 LK04_RS18735 c3321f99ecbe6bb1db52a4cecb629687 436 PANTHER PTHR37419 1 423 4.7E-152 T 22-04-2016 LK04_RS18735 c3321f99ecbe6bb1db52a4cecb629687 436 PANTHER PTHR37419:SF3 1 423 4.7E-152 T 22-04-2016 LK04_RS18735 c3321f99ecbe6bb1db52a4cecb629687 436 Pfam PF07804 HipA-like C-terminal domain 250 404 7.8E-32 T 22-04-2016 IPR012893 HipA-like, C-terminal LK04_RS18735 c3321f99ecbe6bb1db52a4cecb629687 436 Pfam PF13657 HipA N-terminal domain 4 103 8.3E-26 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 LK04_RS03015 ac882171e3b499d278774c89019515b7 88 Gene3D G3DSA:1.10.150.250 2 84 5.3E-29 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase LK04_RS03015 ac882171e3b499d278774c89019515b7 88 PANTHER PTHR39585 1 88 3.5E-34 T 22-04-2016 LK04_RS03015 ac882171e3b499d278774c89019515b7 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 5.1E-24 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase LK04_RS03015 ac882171e3b499d278774c89019515b7 88 SUPERFAMILY SSF109910 1 78 4.18E-25 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase LK04_RS03015 ac882171e3b499d278774c89019515b7 88 PANTHER PTHR39585:SF1 1 88 3.5E-34 T 22-04-2016 LK04_RS19380 833b1356f1a5e9eb99d12b3d6aa8453d 218 PANTHER PTHR30471 1 218 2.9E-122 T 22-04-2016 LK04_RS19380 833b1356f1a5e9eb99d12b3d6aa8453d 218 Gene3D G3DSA:1.10.150.20 41 78 3.7E-5 T 22-04-2016 LK04_RS19380 833b1356f1a5e9eb99d12b3d6aa8453d 218 SUPERFAMILY SSF102712 103 189 8.24E-6 T 22-04-2016 LK04_RS19380 833b1356f1a5e9eb99d12b3d6aa8453d 218 Gene3D G3DSA:3.40.140.10 95 218 2.5E-50 T 22-04-2016 LK04_RS19380 833b1356f1a5e9eb99d12b3d6aa8453d 218 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 218 49.273 T 22-04-2016 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily LK04_RS19380 833b1356f1a5e9eb99d12b3d6aa8453d 218 TIGRFAM TIGR00608 radc: DNA repair protein RadC 6 218 4.3E-81 T 22-04-2016 IPR001405 RadC protein LK04_RS19380 833b1356f1a5e9eb99d12b3d6aa8453d 218 SUPERFAMILY SSF47781 10 83 5.78E-10 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LK04_RS19380 833b1356f1a5e9eb99d12b3d6aa8453d 218 Pfam PF04002 RadC-like JAB domain 98 216 2.4E-44 T 22-04-2016 IPR025657 RadC-like JAB domain LK04_RS19380 833b1356f1a5e9eb99d12b3d6aa8453d 218 PANTHER PTHR30471:SF5 1 218 2.9E-122 T 22-04-2016 LK04_RS19380 833b1356f1a5e9eb99d12b3d6aa8453d 218 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 167 172 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site LK04_RS05440 d57856bd64b44bdaf466d8d4ea5e83a4 213 SUPERFAMILY SSF47616 91 208 5.82E-9 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS05440 d57856bd64b44bdaf466d8d4ea5e83a4 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 86 3.7E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS05440 d57856bd64b44bdaf466d8d4ea5e83a4 213 PANTHER PTHR11260:SF322 1 120 9.7E-43 T 22-04-2016 LK04_RS05440 d57856bd64b44bdaf466d8d4ea5e83a4 213 Gene3D G3DSA:3.40.30.10 6 104 2.2E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05440 d57856bd64b44bdaf466d8d4ea5e83a4 213 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 209 9.2E-52 T 22-04-2016 LK04_RS05440 d57856bd64b44bdaf466d8d4ea5e83a4 213 SUPERFAMILY SSF52833 6 93 9.92E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05440 d57856bd64b44bdaf466d8d4ea5e83a4 213 PANTHER PTHR11260 1 120 9.7E-43 T 22-04-2016 LK04_RS05440 d57856bd64b44bdaf466d8d4ea5e83a4 213 Gene3D G3DSA:1.20.1050.10 105 211 3.1E-42 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 Pfam PF13377 Periplasmic binding protein-like domain 171 331 9.9E-33 T 22-04-2016 LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 SUPERFAMILY SSF53822 61 335 3.99E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 SMART SM00354 1 71 7.4E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 Gene3D G3DSA:3.40.50.2300 58 169 3.2E-37 T 22-04-2016 LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 Gene3D G3DSA:3.40.50.2300 170 332 1.9E-51 T 22-04-2016 LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 Gene3D G3DSA:1.10.260.40 2 57 1.8E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 PANTHER PTHR30146:SF48 1 335 6.8E-116 T 22-04-2016 LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.5E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 PANTHER PTHR30146 1 335 6.8E-116 T 22-04-2016 LK04_RS14350 4e353ba8e9904b1c6156b9bdaa32bcbb 337 SUPERFAMILY SSF47413 1 59 2.33E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS15235 e559c5fc2895566a650d60740371962b 788 PANTHER PTHR30451 46 782 3.1E-216 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LK04_RS15235 e559c5fc2895566a650d60740371962b 788 Pfam PF00577 Outer membrane usher protein 176 693 1.5E-24 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LK04_RS15235 e559c5fc2895566a650d60740371962b 788 PANTHER PTHR30451:SF5 46 782 3.1E-216 T 22-04-2016 LK04_RS18975 8e6259533466c40fdce4b1218d9e213b 295 Gene3D G3DSA:1.10.3720.10 28 294 1.9E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18975 8e6259533466c40fdce4b1218d9e213b 295 SUPERFAMILY SSF161098 34 286 2.22E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18975 8e6259533466c40fdce4b1218d9e213b 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 292 3.3E-86 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 LK04_RS18975 8e6259533466c40fdce4b1218d9e213b 295 PANTHER PTHR30425:SF0 3 292 3.6E-133 T 22-04-2016 LK04_RS18975 8e6259533466c40fdce4b1218d9e213b 295 PANTHER PTHR30425 3 292 3.6E-133 T 22-04-2016 LK04_RS18975 8e6259533466c40fdce4b1218d9e213b 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 3.2E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16570 e01287241fe8e8fda82695b1fca81f57 85 PANTHER PTHR12735:SF24 1 85 3.1E-29 T 22-04-2016 LK04_RS16570 e01287241fe8e8fda82695b1fca81f57 85 Pfam PF01722 BolA-like protein 19 75 1.3E-12 T 22-04-2016 IPR002634 BolA protein LK04_RS16570 e01287241fe8e8fda82695b1fca81f57 85 PIRSF PIRSF003113 1 84 9.6E-20 T 22-04-2016 IPR002634 BolA protein LK04_RS16570 e01287241fe8e8fda82695b1fca81f57 85 PANTHER PTHR12735 1 85 3.1E-29 T 22-04-2016 LK04_RS16570 e01287241fe8e8fda82695b1fca81f57 85 SUPERFAMILY SSF82657 3 83 1.23E-25 T 22-04-2016 IPR002634 BolA protein LK04_RS16570 e01287241fe8e8fda82695b1fca81f57 85 Gene3D G3DSA:3.30.300.90 1 81 1.5E-24 T 22-04-2016 IPR002634 BolA protein LK04_RS15075 06eee4460406f5acda7165003aca994b 733 Gene3D G3DSA:2.170.130.10 33 192 9.9E-37 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS15075 06eee4460406f5acda7165003aca994b 733 PANTHER PTHR32552 70 733 3.4E-217 T 22-04-2016 LK04_RS15075 06eee4460406f5acda7165003aca994b 733 PANTHER PTHR32552 38 43 3.4E-217 T 22-04-2016 LK04_RS15075 06eee4460406f5acda7165003aca994b 733 Pfam PF00593 TonB dependent receptor 490 729 8.9E-27 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS15075 06eee4460406f5acda7165003aca994b 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 181 1.1E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS15075 06eee4460406f5acda7165003aca994b 733 SUPERFAMILY SSF56935 38 43 4.97E-136 T 22-04-2016 LK04_RS15075 06eee4460406f5acda7165003aca994b 733 SUPERFAMILY SSF56935 70 733 4.97E-136 T 22-04-2016 LK04_RS15075 06eee4460406f5acda7165003aca994b 733 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 22-04-2016 IPR010916 TonB box, conserved site LK04_RS15075 06eee4460406f5acda7165003aca994b 733 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 82 733 5.3E-153 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LK04_RS15075 06eee4460406f5acda7165003aca994b 733 Gene3D G3DSA:2.40.170.20 195 733 1.7E-164 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS15075 06eee4460406f5acda7165003aca994b 733 PANTHER PTHR32552:SF17 70 733 3.4E-217 T 22-04-2016 LK04_RS15075 06eee4460406f5acda7165003aca994b 733 PANTHER PTHR32552:SF17 38 43 3.4E-217 T 22-04-2016 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 SMART SM00091 19 92 0.42 T 22-04-2016 IPR000014 PAS domain LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 SMART SM00091 141 211 0.45 T 22-04-2016 IPR000014 PAS domain LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 PANTHER PTHR24422 4 440 1.8E-146 T 22-04-2016 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 SUPERFAMILY SSF55785 32 133 9.95E-21 T 22-04-2016 IPR000014 PAS domain LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 PANTHER PTHR24422:SF10 4 440 1.8E-146 T 22-04-2016 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 Gene3D G3DSA:3.30.450.20 33 135 2.5E-19 T 22-04-2016 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 Gene3D G3DSA:3.30.450.20 154 253 3.6E-23 T 22-04-2016 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 262 1.8E-16 T 22-04-2016 IPR000014 PAS domain LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 32 137 1.9E-12 T 22-04-2016 IPR000014 PAS domain LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 Pfam PF08448 PAS fold 25 136 4.5E-12 T 22-04-2016 IPR013656 PAS fold-4 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 Pfam PF08447 PAS fold 168 251 8.0E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 SMART SM00086 94 136 0.014 T 22-04-2016 IPR001610 PAC motif LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 SMART SM00086 216 258 0.0015 T 22-04-2016 IPR001610 PAC motif LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 Gene3D G3DSA:1.10.287.950 254 439 6.3E-41 T 22-04-2016 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 SMART SM00283 230 441 5.9E-8 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 269 439 9.6E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 SUPERFAMILY SSF58104 232 439 5.62E-46 T 22-04-2016 LK04_RS02305 8071fbc0da08515ae3bc40c904074c13 441 SUPERFAMILY SSF55785 153 255 1.41E-23 T 22-04-2016 IPR000014 PAS domain LK04_RS12415 978da7a9f0e0c62599cdccb758a3b7ee 522 PANTHER PTHR23501:SF69 9 516 6.6E-149 T 22-04-2016 LK04_RS12415 978da7a9f0e0c62599cdccb758a3b7ee 522 Gene3D G3DSA:1.20.1250.20 14 201 4.6E-35 T 22-04-2016 LK04_RS12415 978da7a9f0e0c62599cdccb758a3b7ee 522 PANTHER PTHR23501 9 516 6.6E-149 T 22-04-2016 LK04_RS12415 978da7a9f0e0c62599cdccb758a3b7ee 522 Pfam PF07690 Major Facilitator Superfamily 21 417 1.1E-49 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS12415 978da7a9f0e0c62599cdccb758a3b7ee 522 Gene3D G3DSA:1.20.1250.20 492 513 3.1E-16 T 22-04-2016 LK04_RS12415 978da7a9f0e0c62599cdccb758a3b7ee 522 Gene3D G3DSA:1.20.1250.20 271 433 3.1E-16 T 22-04-2016 LK04_RS12415 978da7a9f0e0c62599cdccb758a3b7ee 522 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 504 9.4E-127 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LK04_RS12415 978da7a9f0e0c62599cdccb758a3b7ee 522 SUPERFAMILY SSF103473 487 512 9.68E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS12415 978da7a9f0e0c62599cdccb758a3b7ee 522 SUPERFAMILY SSF103473 6 207 9.68E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS12415 978da7a9f0e0c62599cdccb758a3b7ee 522 SUPERFAMILY SSF103473 256 427 9.68E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS01340 78e9325fb9eed8adec9cdb6a2cd71a52 105 PANTHER PTHR34772:SF1 1 94 1.2E-43 T 22-04-2016 LK04_RS01340 78e9325fb9eed8adec9cdb6a2cd71a52 105 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.1E-29 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 LK04_RS01340 78e9325fb9eed8adec9cdb6a2cd71a52 105 PANTHER PTHR34772 1 94 1.2E-43 T 22-04-2016 LK04_RS01340 78e9325fb9eed8adec9cdb6a2cd71a52 105 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 LK04_RS01340 78e9325fb9eed8adec9cdb6a2cd71a52 105 SUPERFAMILY SSF50182 7 69 4.43E-24 T 22-04-2016 IPR010920 LSM domain LK04_RS01340 78e9325fb9eed8adec9cdb6a2cd71a52 105 Gene3D G3DSA:2.30.30.100 1 73 7.2E-38 T 22-04-2016 LK04_RS05045 f0342213cfa7fe957007818905e572c0 581 PANTHER PTHR41287 5 579 2.9E-151 T 22-04-2016 LK04_RS05045 f0342213cfa7fe957007818905e572c0 581 Pfam PF03354 Phage Terminase 89 558 9.9E-65 T 22-04-2016 IPR005021 Phage terminase LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 SUPERFAMILY SSF51230 103 194 9.68E-24 T 22-04-2016 IPR011053 Single hybrid motif LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 Gene3D G3DSA:3.30.559.10 387 628 1.1E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 PANTHER PTHR23151 380 628 3.1E-268 T 22-04-2016 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 PANTHER PTHR23151 121 364 3.1E-268 T 22-04-2016 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 Gene3D G3DSA:2.40.50.100 205 279 4.3E-22 T 22-04-2016 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 125 154 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 397 627 9.5E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 Gene3D G3DSA:2.40.50.100 103 194 4.1E-23 T 22-04-2016 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 Gene3D G3DSA:2.40.50.100 1 93 3.1E-23 T 22-04-2016 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 Pfam PF02817 e3 binding domain 323 358 1.4E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 SUPERFAMILY SSF51230 1 94 1.83E-23 T 22-04-2016 IPR011053 Single hybrid motif LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 Gene3D G3DSA:4.10.320.10 316 363 5.7E-22 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 SUPERFAMILY SSF52777 386 627 9.78E-80 T 22-04-2016 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 SUPERFAMILY SSF47005 317 362 1.83E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 179 628 2.6E-227 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 PANTHER PTHR23151:SF68 380 628 3.1E-268 T 22-04-2016 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 PANTHER PTHR23151:SF68 121 364 3.1E-268 T 22-04-2016 LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 SUPERFAMILY SSF51230 204 295 2.36E-23 T 22-04-2016 IPR011053 Single hybrid motif LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 Pfam PF00364 Biotin-requiring enzyme 205 274 7.1E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 Pfam PF00364 Biotin-requiring enzyme 103 173 5.8E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment LK04_RS15275 de2b8d02218e14dcc93b7a0a6fa64076 628 Pfam PF00364 Biotin-requiring enzyme 4 73 2.8E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment LK04_RS11145 83361f014dd8061833e53cab9c6923e9 157 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LK04_RS11145 83361f014dd8061833e53cab9c6923e9 157 PANTHER PTHR22769:SF14 1 140 5.8E-25 T 22-04-2016 LK04_RS11145 83361f014dd8061833e53cab9c6923e9 157 SUPERFAMILY SSF55811 5 150 7.04E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS11145 83361f014dd8061833e53cab9c6923e9 157 PANTHER PTHR22769 1 140 5.8E-25 T 22-04-2016 LK04_RS11145 83361f014dd8061833e53cab9c6923e9 157 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.5E-5 T 22-04-2016 IPR020476 NUDIX hydrolase LK04_RS11145 83361f014dd8061833e53cab9c6923e9 157 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.5E-5 T 22-04-2016 IPR020476 NUDIX hydrolase LK04_RS11145 83361f014dd8061833e53cab9c6923e9 157 Pfam PF00293 NUDIX domain 4 115 6.5E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS11145 83361f014dd8061833e53cab9c6923e9 157 Gene3D G3DSA:3.90.79.10 2 140 1.9E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS06560 d1075c5d29ab58a1c08e535cecfe1a6c 534 PIRSF PIRSF002741 23 530 1.9E-66 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS06560 d1075c5d29ab58a1c08e535cecfe1a6c 534 Gene3D G3DSA:3.10.105.10 313 496 5.2E-31 T 22-04-2016 LK04_RS06560 d1075c5d29ab58a1c08e535cecfe1a6c 534 PANTHER PTHR30290 20 534 4.3E-95 T 22-04-2016 LK04_RS06560 d1075c5d29ab58a1c08e535cecfe1a6c 534 SUPERFAMILY SSF53850 52 525 1.99E-113 T 22-04-2016 LK04_RS06560 d1075c5d29ab58a1c08e535cecfe1a6c 534 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 106 432 4.2E-68 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS06560 d1075c5d29ab58a1c08e535cecfe1a6c 534 Gene3D G3DSA:3.40.190.10 212 312 1.4E-24 T 22-04-2016 LK04_RS06560 d1075c5d29ab58a1c08e535cecfe1a6c 534 Gene3D G3DSA:3.90.76.10 73 211 2.2E-35 T 22-04-2016 LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 SUPERFAMILY SSF81330 12 126 2.09E-36 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 4.4E-14 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 4.4E-14 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 4.4E-14 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 PANTHER PTHR30266 1 133 7.2E-58 T 22-04-2016 LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 PANTHER PTHR30266:SF2 1 133 7.2E-58 T 22-04-2016 LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 133 29.515 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 130 1.4E-46 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 132 8.1E-54 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 Gene3D G3DSA:1.20.5.220 120 133 8.7E-5 T 22-04-2016 IPR029027 Single alpha-helix domain LK04_RS01020 e304958fba9fb70ac6dbf2e7194034b0 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site LK04_RS05465 05377a68e99e159a2bfcde12181ace27 164 Pfam PF03887 YfbU domain 1 164 6.0E-68 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU LK04_RS05465 05377a68e99e159a2bfcde12181ace27 164 SUPERFAMILY SSF116960 1 164 3.92E-67 T 22-04-2016 LK04_RS05465 05377a68e99e159a2bfcde12181ace27 164 Gene3D G3DSA:1.10.287.680 1 52 2.4E-30 T 22-04-2016 IPR023145 YfbU, helix-hairpin domain LK04_RS05465 05377a68e99e159a2bfcde12181ace27 164 Gene3D G3DSA:1.10.3190.10 53 164 4.1E-48 T 22-04-2016 IPR023146 YfbU, alpha-helical bundle domain LK04_RS05465 05377a68e99e159a2bfcde12181ace27 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 38.417 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU LK04_RS05465 05377a68e99e159a2bfcde12181ace27 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 2.0E-82 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU LK04_RS05465 05377a68e99e159a2bfcde12181ace27 164 PIRSF PIRSF006272 1 164 3.6E-75 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU LK04_RS03660 2149bd0ec428514445b87aaf386af2f3 254 PANTHER PTHR32125:SF1 1 228 1.1E-123 T 22-04-2016 LK04_RS03660 2149bd0ec428514445b87aaf386af2f3 254 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 4.2E-112 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LK04_RS03660 2149bd0ec428514445b87aaf386af2f3 254 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.4E-71 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LK04_RS03660 2149bd0ec428514445b87aaf386af2f3 254 Gene3D G3DSA:1.10.1270.20 161 249 5.8E-38 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LK04_RS03660 2149bd0ec428514445b87aaf386af2f3 254 Gene3D G3DSA:3.40.1280.10 1 160 1.6E-67 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LK04_RS03660 2149bd0ec428514445b87aaf386af2f3 254 PANTHER PTHR32125 1 228 1.1E-123 T 22-04-2016 LK04_RS03660 2149bd0ec428514445b87aaf386af2f3 254 SUPERFAMILY SSF75217 1 248 3.86E-104 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LK04_RS03660 2149bd0ec428514445b87aaf386af2f3 254 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 254 121.061 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LK04_RS03660 2149bd0ec428514445b87aaf386af2f3 254 PIRSF PIRSF000386 1 253 1.1E-104 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LK04_RS08095 95b48a97b5dcd0d215a785cef03815fc 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 2.1E-78 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 LK04_RS08095 95b48a97b5dcd0d215a785cef03815fc 215 Pfam PF01914 MarC family integral membrane protein 9 210 7.5E-72 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 LK04_RS08095 95b48a97b5dcd0d215a785cef03815fc 215 PANTHER PTHR33508 4 215 4.5E-103 T 22-04-2016 LK04_RS08095 95b48a97b5dcd0d215a785cef03815fc 215 PANTHER PTHR33508:SF1 4 215 4.5E-103 T 22-04-2016 LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 Gene3D G3DSA:1.10.10.10 1 79 7.2E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 SUPERFAMILY SSF53850 89 296 8.69E-31 T 22-04-2016 LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 Gene3D G3DSA:3.40.190.10 194 261 1.9E-12 T 22-04-2016 LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 Gene3D G3DSA:3.40.190.10 80 193 3.7E-16 T 22-04-2016 LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 PANTHER PTHR30293 1 295 2.4E-118 T 22-04-2016 LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 PANTHER PTHR30293:SF0 1 295 2.4E-118 T 22-04-2016 LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 Pfam PF03466 LysR substrate binding domain 88 290 7.8E-32 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 SUPERFAMILY SSF46785 1 82 3.75E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16830 9f118bca9d45591ceaf6d7b9e64d787c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05740 a52426a3e4a20db38e2fb5bb9e989ddb 191 SUPERFAMILY SSF54001 68 186 2.29E-39 T 22-04-2016 LK04_RS05740 a52426a3e4a20db38e2fb5bb9e989ddb 191 Gene3D G3DSA:3.90.1720.10 68 186 6.8E-44 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS05740 a52426a3e4a20db38e2fb5bb9e989ddb 191 Pfam PF00877 NlpC/P60 family 80 184 9.8E-32 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS05740 a52426a3e4a20db38e2fb5bb9e989ddb 191 PANTHER PTHR21666:SF210 7 38 2.5E-83 T 22-04-2016 LK04_RS05740 a52426a3e4a20db38e2fb5bb9e989ddb 191 PANTHER PTHR21666:SF210 71 186 2.5E-83 T 22-04-2016 LK04_RS05740 a52426a3e4a20db38e2fb5bb9e989ddb 191 PANTHER PTHR21666 7 38 2.5E-83 T 22-04-2016 LK04_RS05740 a52426a3e4a20db38e2fb5bb9e989ddb 191 PANTHER PTHR21666 71 186 2.5E-83 T 22-04-2016 LK04_RS15245 5f10c2267bf14e8e69f76fdc35f8fa82 170 Pfam PF05229 Spore Coat Protein U domain 23 167 2.5E-35 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS15245 5f10c2267bf14e8e69f76fdc35f8fa82 170 PANTHER PTHR37089 25 170 1.4E-53 T 22-04-2016 LK04_RS15245 5f10c2267bf14e8e69f76fdc35f8fa82 170 SMART SM00972 109 167 1.5E-20 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS15245 5f10c2267bf14e8e69f76fdc35f8fa82 170 PANTHER PTHR37089:SF3 25 170 1.4E-53 T 22-04-2016 LK04_RS11800 17eed16c1c375f0ace4396b5e8067ee4 218 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 86 116 - T 22-04-2016 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 LK04_RS11800 17eed16c1c375f0ace4396b5e8067ee4 218 PANTHER PTHR23291:SF37 2 218 3.6E-108 T 22-04-2016 LK04_RS11800 17eed16c1c375f0ace4396b5e8067ee4 218 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 18 212 1.2E-40 T 22-04-2016 LK04_RS11800 17eed16c1c375f0ace4396b5e8067ee4 218 PANTHER PTHR23291 2 218 3.6E-108 T 22-04-2016 IPR006214 Bax inhibitor 1-related LK04_RS11850 55e72a49b8f67c548ac2b3fe768732a2 712 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 11 707 2.4E-296 T 22-04-2016 IPR010019 Integral membrane protein, YccS LK04_RS11850 55e72a49b8f67c548ac2b3fe768732a2 712 Pfam PF13515 Fusaric acid resistance protein-like 409 528 2.0E-21 T 22-04-2016 LK04_RS11850 55e72a49b8f67c548ac2b3fe768732a2 712 Pfam PF12805 FUSC-like inner membrane protein yccS 69 348 1.1E-106 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal LK04_RS11850 55e72a49b8f67c548ac2b3fe768732a2 712 PANTHER PTHR30509 4 707 8.0E-304 T 22-04-2016 LK04_RS11850 55e72a49b8f67c548ac2b3fe768732a2 712 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 11 707 4.7E-272 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK LK04_RS11850 55e72a49b8f67c548ac2b3fe768732a2 712 PANTHER PTHR30509:SF8 4 707 8.0E-304 T 22-04-2016 LK04_RS17945 b4c1ddc09faa59b84c6765cc32563b85 545 PANTHER PTHR10566 4 458 2.7E-301 T 22-04-2016 LK04_RS17945 b4c1ddc09faa59b84c6765cc32563b85 545 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 2.2E-183 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 LK04_RS17945 b4c1ddc09faa59b84c6765cc32563b85 545 SUPERFAMILY SSF56112 193 437 1.09E-50 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS17945 b4c1ddc09faa59b84c6765cc32563b85 545 SUPERFAMILY SSF56112 94 158 1.09E-50 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS17945 b4c1ddc09faa59b84c6765cc32563b85 545 PANTHER PTHR10566:SF79 4 458 2.7E-301 T 22-04-2016 LK04_RS17945 b4c1ddc09faa59b84c6765cc32563b85 545 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 541 56.958 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 LK04_RS17945 b4c1ddc09faa59b84c6765cc32563b85 545 Gene3D G3DSA:3.30.200.20 192 243 1.0E-4 T 22-04-2016 LK04_RS17945 b4c1ddc09faa59b84c6765cc32563b85 545 Gene3D G3DSA:3.30.200.20 126 156 1.0E-4 T 22-04-2016 LK04_RS17945 b4c1ddc09faa59b84c6765cc32563b85 545 Pfam PF03109 ABC1 family 113 230 1.9E-34 T 22-04-2016 IPR004147 UbiB domain LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.0E-157 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 PANTHER PTHR19136:SF52 13 273 2.4E-134 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 SUPERFAMILY SSF51161 1 256 1.52E-79 T 22-04-2016 IPR011004 Trimeric LpxA-like LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.794 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 PANTHER PTHR19136 13 273 2.4E-134 T 22-04-2016 LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 Gene3D G3DSA:2.160.10.10 89 255 8.4E-64 T 22-04-2016 LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0014 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 3.9E-25 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 Gene3D G3DSA:1.10.166.10 1 70 2.0E-31 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LK04_RS15000 8b6cb5a06024fc117cc010d5c7415a68 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 3.4E-13 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS04535 b0efb91fe18ea02b53e283675ef1b97a 349 PANTHER PTHR32196 10 340 5.6E-119 T 22-04-2016 LK04_RS04535 b0efb91fe18ea02b53e283675ef1b97a 349 PANTHER PTHR32196:SF39 10 340 5.6E-119 T 22-04-2016 LK04_RS04535 b0efb91fe18ea02b53e283675ef1b97a 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 316 1.5E-25 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 Pfam PF13481 AAA domain 76 225 1.3E-15 T 22-04-2016 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 Gene3D G3DSA:3.30.230.10 288 457 6.2E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 Gene3D G3DSA:3.40.50.300 62 280 8.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 SUPERFAMILY SSF54211 258 272 2.01E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 SUPERFAMILY SSF54211 306 457 2.01E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 SMART SM00382 94 248 4.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.7E-93 T 22-04-2016 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.7E-93 T 22-04-2016 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.7E-93 T 22-04-2016 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.7E-93 T 22-04-2016 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.7E-93 T 22-04-2016 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.7E-93 T 22-04-2016 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.7E-93 T 22-04-2016 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 PANTHER PTHR32472 5 457 1.0E-223 T 22-04-2016 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.9E-9 T 22-04-2016 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 2.5E-235 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 LK04_RS15950 2ec5de1d41af60219202822bc771f0ff 460 SUPERFAMILY SSF52540 72 291 1.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 PANTHER PTHR30203 4 471 9.6E-115 T 22-04-2016 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 PANTHER PTHR30203:SF6 4 471 9.6E-115 T 22-04-2016 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 469 5.0E-109 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 Gene3D G3DSA:1.20.1600.10 55 94 9.4E-72 T 22-04-2016 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 Gene3D G3DSA:1.20.1600.10 146 318 9.4E-72 T 22-04-2016 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 Gene3D G3DSA:1.20.1600.10 356 470 9.4E-72 T 22-04-2016 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 Gene3D G3DSA:2.20.200.10 319 354 3.0E-17 T 22-04-2016 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 Gene3D G3DSA:2.20.200.10 104 145 3.0E-17 T 22-04-2016 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 Pfam PF02321 Outer membrane efflux protein 68 258 2.2E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 Pfam PF02321 Outer membrane efflux protein 287 457 2.6E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 SUPERFAMILY SSF56954 59 472 1.96E-87 T 22-04-2016 LK04_RS19310 7cfd5a7030cd3041ddaf00d3bb65fcbe 479 SUPERFAMILY SSF56954 4 29 1.96E-87 T 22-04-2016 LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 Gene3D G3DSA:1.10.10.10 13 63 5.7E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 5.9E-21 T 22-04-2016 LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 SMART SM00344 12 121 5.6E-52 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 PANTHER PTHR30154 4 162 4.5E-106 T 22-04-2016 LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 PANTHER PTHR30154:SF0 4 162 4.5E-106 T 22-04-2016 LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 SUPERFAMILY SSF54909 74 157 1.88E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 Gene3D G3DSA:3.30.70.920 65 161 3.1E-32 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 SUPERFAMILY SSF46785 12 70 1.46E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LK04_RS12140 6a857f67107ad0372b14d8c2caee452a 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.2E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LK04_RS13800 a74c722be13c65eb3baa50622392abb6 201 SMART SM00493 81 166 4.6E-18 T 22-04-2016 IPR006171 Toprim domain LK04_RS13800 a74c722be13c65eb3baa50622392abb6 201 PANTHER PTHR30446:SF0 1 201 8.1E-119 T 22-04-2016 LK04_RS13800 a74c722be13c65eb3baa50622392abb6 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 9.4E-81 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 LK04_RS13800 a74c722be13c65eb3baa50622392abb6 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 103.072 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 LK04_RS13800 a74c722be13c65eb3baa50622392abb6 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 LK04_RS13800 a74c722be13c65eb3baa50622392abb6 201 PANTHER PTHR30446 1 201 8.1E-119 T 22-04-2016 LK04_RS13800 a74c722be13c65eb3baa50622392abb6 201 Pfam PF02132 RecR protein 41 77 2.9E-15 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger LK04_RS13800 a74c722be13c65eb3baa50622392abb6 201 Pfam PF13662 Toprim domain 82 172 9.9E-23 T 22-04-2016 IPR006171 Toprim domain LK04_RS13800 a74c722be13c65eb3baa50622392abb6 201 SUPERFAMILY SSF111304 2 199 1.57E-71 T 22-04-2016 IPR023627 Recombination protein RecR LK04_RS04955 a681e23659751aefdd3517c7804c92ce 67 Pfam PF14549 DNA-binding transcriptional regulator Cro 3 59 2.3E-21 T 22-04-2016 LK04_RS04955 a681e23659751aefdd3517c7804c92ce 67 SUPERFAMILY SSF47413 1 57 3.88E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS04955 a681e23659751aefdd3517c7804c92ce 67 Gene3D G3DSA:1.10.260.40 1 60 1.0E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS03845 ddde2307265fb5b0a1afa9f5552de1cb 311 SUPERFAMILY SSF82282 9 310 3.4E-86 T 22-04-2016 IPR003726 Homocysteine-binding domain LK04_RS03845 ddde2307265fb5b0a1afa9f5552de1cb 311 PANTHER PTHR21091:SF123 1 305 2.5E-99 T 22-04-2016 LK04_RS03845 ddde2307265fb5b0a1afa9f5552de1cb 311 PANTHER PTHR21091 1 305 2.5E-99 T 22-04-2016 LK04_RS03845 ddde2307265fb5b0a1afa9f5552de1cb 311 Gene3D G3DSA:3.20.20.330 3 309 2.6E-96 T 22-04-2016 IPR003726 Homocysteine-binding domain LK04_RS03845 ddde2307265fb5b0a1afa9f5552de1cb 311 Pfam PF02574 Homocysteine S-methyltransferase 16 306 1.0E-77 T 22-04-2016 IPR003726 Homocysteine-binding domain LK04_RS08990 da5f398bc1456713c5e1c5d216dd88be 348 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 12 335 1.4E-66 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LK04_RS08990 da5f398bc1456713c5e1c5d216dd88be 348 PANTHER PTHR30365 3 342 5.6E-43 T 22-04-2016 LK04_RS17405 0db65fcbaaf0c7d77d75bff6abb1eefa 446 PANTHER PTHR30354 1 446 2.7E-289 T 22-04-2016 LK04_RS17405 0db65fcbaaf0c7d77d75bff6abb1eefa 446 Pfam PF02447 GntP family permease 6 441 1.0E-159 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS17405 0db65fcbaaf0c7d77d75bff6abb1eefa 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 444 1.9E-166 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS17405 0db65fcbaaf0c7d77d75bff6abb1eefa 446 PANTHER PTHR30354:SF8 1 446 2.7E-289 T 22-04-2016 LK04_RS17405 0db65fcbaaf0c7d77d75bff6abb1eefa 446 PIRSF PIRSF002746 1 446 1.4E-154 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS12190 dc5ee5bfab3412b63f35074d63ed60e4 298 PANTHER PTHR35804:SF1 1 297 3.6E-85 T 22-04-2016 LK04_RS12190 dc5ee5bfab3412b63f35074d63ed60e4 298 Pfam PF03956 Membrane protein of unknown function (DUF340) 112 296 3.6E-56 T 22-04-2016 IPR005642 Lysine exporter LysO LK04_RS12190 dc5ee5bfab3412b63f35074d63ed60e4 298 PANTHER PTHR35804 1 297 3.6E-85 T 22-04-2016 LK04_RS12190 dc5ee5bfab3412b63f35074d63ed60e4 298 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 294 1.0E-62 T 22-04-2016 IPR005642 Lysine exporter LysO LK04_RS04315 ece950e044c2e6a312b6d2e8a788789b 532 Gene3D G3DSA:1.10.3720.10 19 42 3.3E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04315 ece950e044c2e6a312b6d2e8a788789b 532 Gene3D G3DSA:1.10.3720.10 259 528 3.3E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04315 ece950e044c2e6a312b6d2e8a788789b 532 PANTHER PTHR30425:SF7 173 530 2.1E-196 T 22-04-2016 LK04_RS04315 ece950e044c2e6a312b6d2e8a788789b 532 SUPERFAMILY SSF161098 245 515 2.09E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04315 ece950e044c2e6a312b6d2e8a788789b 532 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 264 524 6.6E-74 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 LK04_RS04315 ece950e044c2e6a312b6d2e8a788789b 532 PANTHER PTHR30425 173 530 2.1E-196 T 22-04-2016 LK04_RS04315 ece950e044c2e6a312b6d2e8a788789b 532 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 300 528 5.1E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS01280 d2cc3f2e98b8c03a3975a1d4db33899b 298 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 285 2.3E-89 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 LK04_RS01280 d2cc3f2e98b8c03a3975a1d4db33899b 298 PANTHER PTHR10067 12 294 3.4E-110 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 LK04_RS01280 d2cc3f2e98b8c03a3975a1d4db33899b 298 Pfam PF02666 Phosphatidylserine decarboxylase 63 283 1.6E-57 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 LK04_RS01280 d2cc3f2e98b8c03a3975a1d4db33899b 298 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 48.349 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 PANTHER PTHR30524 1 381 2.2E-209 T 22-04-2016 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 SUPERFAMILY SSF51735 1 203 5.44E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 Gene3D G3DSA:1.10.1040.10 203 381 1.2E-48 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 SUPERFAMILY SSF48179 204 381 5.78E-45 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 41.161 T 22-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 9.8E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 9.8E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 9.8E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 9.8E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 Gene3D G3DSA:3.40.50.720 2 202 4.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 PANTHER PTHR30524:SF0 1 381 2.2E-209 T 22-04-2016 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 8.8E-25 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LK04_RS18465 feee1e4818b832851a00f1858eb36349 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 149 371 4.0E-67 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 Gene3D G3DSA:3.40.50.720 2 109 1.1E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 256 1.7E-29 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 PANTHER PTHR10996 1 330 2.8E-172 T 22-04-2016 LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 6.5E-30 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 PANTHER PTHR10996:SF111 1 330 2.8E-172 T 22-04-2016 LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 SUPERFAMILY SSF52283 5 128 2.1E-17 T 22-04-2016 LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 Gene3D G3DSA:3.40.50.720 110 259 7.7E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 280 1.5E-16 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 SUPERFAMILY SSF51735 91 246 1.02E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05345 68e126553faa462d44e218bc232e65c7 374 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 46.585 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 LK04_RS13375 74a1b064cd5845ac2e23b713a862d605 156 PANTHER PTHR33603:SF1 1 155 2.9E-70 T 22-04-2016 LK04_RS13375 74a1b064cd5845ac2e23b713a862d605 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 7.1E-81 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS13375 74a1b064cd5845ac2e23b713a862d605 156 Gene3D G3DSA:3.40.1280.10 2 155 5.1E-53 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LK04_RS13375 74a1b064cd5845ac2e23b713a862d605 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.728 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS13375 74a1b064cd5845ac2e23b713a862d605 156 SUPERFAMILY SSF75217 1 154 1.31E-48 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LK04_RS13375 74a1b064cd5845ac2e23b713a862d605 156 PANTHER PTHR33603 1 155 2.9E-70 T 22-04-2016 LK04_RS13375 74a1b064cd5845ac2e23b713a862d605 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.5E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS13375 74a1b064cd5845ac2e23b713a862d605 156 PIRSF PIRSF004505 1 155 1.7E-40 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS15885 f00dbab9421f2aa399e690c17ae3af8c 422 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 1.0E-178 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA LK04_RS15885 f00dbab9421f2aa399e690c17ae3af8c 422 Gene3D G3DSA:3.40.50.2300 146 345 3.6E-74 T 22-04-2016 LK04_RS15885 f00dbab9421f2aa399e690c17ae3af8c 422 PANTHER PTHR30483 1 420 4.4E-226 T 22-04-2016 LK04_RS15885 f00dbab9421f2aa399e690c17ae3af8c 422 PANTHER PTHR30483:SF8 1 420 4.4E-226 T 22-04-2016 LK04_RS15885 f00dbab9421f2aa399e690c17ae3af8c 422 Pfam PF13433 Periplasmic binding protein domain 31 407 6.0E-173 T 22-04-2016 LK04_RS15885 f00dbab9421f2aa399e690c17ae3af8c 422 SUPERFAMILY SSF53822 30 409 1.39E-93 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS02860 0120d45eeb2173b4c3246e554922957f 138 SUPERFAMILY SSF140804 12 136 9.81E-31 T 22-04-2016 IPR027405 YidB-like LK04_RS02860 0120d45eeb2173b4c3246e554922957f 138 Pfam PF06078 Bacterial protein of unknown function (DUF937) 11 113 3.3E-9 T 22-04-2016 IPR009282 Protein of unknown function DUF937 LK04_RS02860 0120d45eeb2173b4c3246e554922957f 138 Gene3D G3DSA:1.10.10.690 1 137 4.3E-39 T 22-04-2016 IPR027405 YidB-like LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 SMART SM01329 28 412 1.3E-176 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 PANTHER PTHR11835:SF52 1 164 3.6E-240 T 22-04-2016 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 PANTHER PTHR11835:SF52 188 255 3.6E-240 T 22-04-2016 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 PANTHER PTHR11835:SF52 275 416 3.6E-240 T 22-04-2016 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 SUPERFAMILY SSF53659 3 416 3.07E-148 T 22-04-2016 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 PANTHER PTHR11835 1 164 3.6E-240 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 PANTHER PTHR11835 188 255 3.6E-240 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 PANTHER PTHR11835 275 416 3.6E-240 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 5.9E-233 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 2.9E-116 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS11135 359a2cb0f78be8a349ab0fb7593fe9b9 416 Gene3D G3DSA:3.40.718.10 10 416 7.6E-166 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS16650 adcbc7277468aaf4ef52a0dbb094b5a2 90 PANTHER PTHR33705 1 90 6.5E-37 T 22-04-2016 LK04_RS16650 adcbc7277468aaf4ef52a0dbb094b5a2 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LK04_RS16650 adcbc7277468aaf4ef52a0dbb094b5a2 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 5.5E-9 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS16650 adcbc7277468aaf4ef52a0dbb094b5a2 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 5.5E-9 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS16650 adcbc7277468aaf4ef52a0dbb094b5a2 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 5.5E-9 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS16650 adcbc7277468aaf4ef52a0dbb094b5a2 90 SUPERFAMILY SSF55594 4 90 1.31E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS16650 adcbc7277468aaf4ef52a0dbb094b5a2 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 1.9E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS16650 adcbc7277468aaf4ef52a0dbb094b5a2 90 Gene3D G3DSA:3.30.1340.10 3 89 2.7E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS16650 adcbc7277468aaf4ef52a0dbb094b5a2 90 PANTHER PTHR33705:SF2 1 90 6.5E-37 T 22-04-2016 LK04_RS16650 adcbc7277468aaf4ef52a0dbb094b5a2 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 6.6E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS08090 693927d833c8053807ed736610d84f04 892 PANTHER PTHR11496 360 867 0.0 T 22-04-2016 LK04_RS08090 693927d833c8053807ed736610d84f04 892 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LK04_RS08090 693927d833c8053807ed736610d84f04 892 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LK04_RS08090 693927d833c8053807ed736610d84f04 892 SUPERFAMILY SSF53720 6 453 1.7E-84 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS08090 693927d833c8053807ed736610d84f04 892 Gene3D G3DSA:3.40.605.10 4 225 1.2E-24 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS08090 693927d833c8053807ed736610d84f04 892 Pfam PF00171 Aldehyde dehydrogenase family 5 274 1.6E-26 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS08090 693927d833c8053807ed736610d84f04 892 SUPERFAMILY SSF56796 451 864 3.14E-119 T 22-04-2016 LK04_RS08090 693927d833c8053807ed736610d84f04 892 PIRSF PIRSF000111 1 866 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 LK04_RS08090 693927d833c8053807ed736610d84f04 892 Gene3D G3DSA:1.20.1090.10 644 864 1.1E-68 T 22-04-2016 LK04_RS08090 693927d833c8053807ed736610d84f04 892 Gene3D G3DSA:3.40.309.10 226 273 2.1E-30 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS08090 693927d833c8053807ed736610d84f04 892 Gene3D G3DSA:3.40.309.10 309 404 2.1E-30 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS08090 693927d833c8053807ed736610d84f04 892 Gene3D G3DSA:3.40.50.1970 450 643 1.1E-63 T 22-04-2016 LK04_RS08090 693927d833c8053807ed736610d84f04 892 PANTHER PTHR11496:SF79 360 867 0.0 T 22-04-2016 LK04_RS08090 693927d833c8053807ed736610d84f04 892 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 6.8E-115 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 LK04_RS18950 18501513667944d3a714add5a7f61a08 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 4.9E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS18950 18501513667944d3a714add5a7f61a08 330 Gene3D G3DSA:3.40.50.2300 66 173 7.3E-33 T 22-04-2016 LK04_RS18950 18501513667944d3a714add5a7f61a08 330 PANTHER PTHR30146 4 330 6.6E-175 T 22-04-2016 LK04_RS18950 18501513667944d3a714add5a7f61a08 330 SMART SM00354 5 75 7.1E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS18950 18501513667944d3a714add5a7f61a08 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS18950 18501513667944d3a714add5a7f61a08 330 SUPERFAMILY SSF53822 65 324 1.69E-52 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS18950 18501513667944d3a714add5a7f61a08 330 PANTHER PTHR30146:SF37 4 330 6.6E-175 T 22-04-2016 LK04_RS18950 18501513667944d3a714add5a7f61a08 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 312 2.0E-24 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LK04_RS18950 18501513667944d3a714add5a7f61a08 330 Gene3D G3DSA:1.10.260.40 4 57 2.5E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS18950 18501513667944d3a714add5a7f61a08 330 Gene3D G3DSA:3.40.50.2300 174 328 2.2E-38 T 22-04-2016 LK04_RS18950 18501513667944d3a714add5a7f61a08 330 SUPERFAMILY SSF47413 4 58 1.22E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PANTHER PTHR10309:SF0 1 373 5.4E-134 T 22-04-2016 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PIRSF PIRSF001480 1 391 8.7E-107 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PRINTS PR00714 Phosphomannose isomerase type I signature 273 292 1.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PRINTS PR00714 Phosphomannose isomerase type I signature 125 148 1.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PRINTS PR00714 Phosphomannose isomerase type I signature 80 101 1.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 1.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 1.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PRINTS PR00714 Phosphomannose isomerase type I signature 254 273 1.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PRINTS PR00714 Phosphomannose isomerase type I signature 219 234 1.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PRINTS PR00714 Phosphomannose isomerase type I signature 235 254 1.6E-72 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 SUPERFAMILY SSF51182 1 374 5.51E-101 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 125 133 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 Gene3D G3DSA:1.10.441.10 273 286 1.8E-24 T 22-04-2016 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 Gene3D G3DSA:1.10.441.10 140 230 1.8E-24 T 22-04-2016 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 Gene3D G3DSA:2.60.120.10 6 139 5.2E-65 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 Gene3D G3DSA:2.60.120.10 237 272 5.2E-65 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 383 7.3E-118 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 Pfam PF01238 Phosphomannose isomerase type I 1 353 3.0E-100 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 254 279 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 Gene3D G3DSA:2.60.120.10 287 374 5.7E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS09705 b4871e1762fb70411b19fe7db3d0e8f7 391 PANTHER PTHR10309 1 373 5.4E-134 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 SUPERFAMILY SSF51726 392 753 5.36E-113 T 22-04-2016 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 Gene3D G3DSA:3.20.20.210 388 754 1.0E-129 T 22-04-2016 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 PIRSF PIRSF000382 2 755 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 PANTHER PTHR30519 1 755 0.0 T 22-04-2016 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 Gene3D G3DSA:3.20.20.210 5 385 4.3E-147 T 22-04-2016 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 SUPERFAMILY SSF51726 5 390 4.06E-108 T 22-04-2016 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 1.2E-123 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 753 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 PANTHER PTHR30519:SF0 1 755 0.0 T 22-04-2016 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 754 36.896 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LK04_RS17980 55cac14736ac7c9bf7aa43579c910da7 756 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 427 750 2.4E-157 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LK04_RS17885 b9c47bc9a6375bccd87123138c1c3770 205 Gene3D G3DSA:3.30.230.30 13 131 1.3E-42 T 22-04-2016 IPR001498 Impact, N-terminal LK04_RS17885 b9c47bc9a6375bccd87123138c1c3770 205 PANTHER PTHR16301 1 205 1.5E-62 T 22-04-2016 IPR023582 Impact family LK04_RS17885 b9c47bc9a6375bccd87123138c1c3770 205 SUPERFAMILY SSF54980 136 204 3.17E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS17885 b9c47bc9a6375bccd87123138c1c3770 205 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 200 4.5E-76 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal LK04_RS17885 b9c47bc9a6375bccd87123138c1c3770 205 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 81 110 - T 22-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site LK04_RS17885 b9c47bc9a6375bccd87123138c1c3770 205 SUPERFAMILY SSF54211 12 132 1.67E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS17885 b9c47bc9a6375bccd87123138c1c3770 205 Pfam PF09186 Domain of unknown function (DUF1949) 142 196 1.5E-14 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal LK04_RS17885 b9c47bc9a6375bccd87123138c1c3770 205 Gene3D G3DSA:3.30.70.240 136 204 1.4E-24 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS17885 b9c47bc9a6375bccd87123138c1c3770 205 Pfam PF01205 Uncharacterized protein family UPF0029 19 124 4.9E-27 T 22-04-2016 IPR001498 Impact, N-terminal LK04_RS10400 241c6f12c0f67e91dac081ae0cd8a7b1 277 PANTHER PTHR31756:SF3 3 277 7.5E-121 T 22-04-2016 LK04_RS10400 241c6f12c0f67e91dac081ae0cd8a7b1 277 PANTHER PTHR31756 3 277 7.5E-121 T 22-04-2016 LK04_RS10400 241c6f12c0f67e91dac081ae0cd8a7b1 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 73.266 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein LK04_RS10400 241c6f12c0f67e91dac081ae0cd8a7b1 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 9.7E-72 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 PANTHER PTHR30118 1 296 2.4E-106 T 22-04-2016 LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.8E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 Gene3D G3DSA:3.40.190.10 173 267 1.9E-27 T 22-04-2016 LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 SUPERFAMILY SSF53850 90 293 6.05E-43 T 22-04-2016 LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 Pfam PF03466 LysR substrate binding domain 96 295 2.3E-33 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 PANTHER PTHR30118:SF7 1 296 2.4E-106 T 22-04-2016 LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 Gene3D G3DSA:1.10.10.10 2 85 7.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 SUPERFAMILY SSF46785 4 84 1.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 Gene3D G3DSA:3.40.190.10 271 294 4.6E-30 T 22-04-2016 LK04_RS16130 a86aca2e4a9225eae379cb7815bac2d2 296 Gene3D G3DSA:3.40.190.10 90 172 4.6E-30 T 22-04-2016 LK04_RS02060 ddf2400242e57ca050fc7cad497127c8 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 1.5E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS02060 ddf2400242e57ca050fc7cad497127c8 104 Gene3D G3DSA:3.40.50.2300 1 99 8.6E-37 T 22-04-2016 LK04_RS02060 ddf2400242e57ca050fc7cad497127c8 104 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 9.9E-29 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 LK04_RS02060 ddf2400242e57ca050fc7cad497127c8 104 PANTHER PTHR30505 1 99 2.6E-35 T 22-04-2016 LK04_RS02060 ddf2400242e57ca050fc7cad497127c8 104 SUPERFAMILY SSF52794 2 100 1.59E-32 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS13965 bfdb138a8927ee131f159a6ea217e7e7 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LK04_RS13965 bfdb138a8927ee131f159a6ea217e7e7 90 Gene3D G3DSA:4.10.520.10 1 90 1.3E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LK04_RS13965 bfdb138a8927ee131f159a6ea217e7e7 90 PANTHER PTHR33175 1 90 2.3E-44 T 22-04-2016 LK04_RS13965 bfdb138a8927ee131f159a6ea217e7e7 90 SUPERFAMILY SSF47729 1 90 2.94E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LK04_RS13965 bfdb138a8927ee131f159a6ea217e7e7 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.3E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS13965 bfdb138a8927ee131f159a6ea217e7e7 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.3E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS13965 bfdb138a8927ee131f159a6ea217e7e7 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.3E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS13965 bfdb138a8927ee131f159a6ea217e7e7 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 8.7E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS13965 bfdb138a8927ee131f159a6ea217e7e7 90 SMART SM00411 1 90 1.4E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 PANTHER PTHR23105 21 229 1.4E-81 T 22-04-2016 LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 SUPERFAMILY SSF56808 6 225 1.57E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 Gene3D G3DSA:3.40.50.790 69 159 4.7E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 9.4E-52 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.5E-106 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 PIRSF PIRSF002155 1 227 4.3E-77 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 Gene3D G3DSA:3.30.190.20 161 225 1.7E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 Gene3D G3DSA:3.30.190.20 17 68 1.7E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 PANTHER PTHR23105:SF5 21 229 1.4E-81 T 22-04-2016 LK04_RS17790 65d151f680338ddbae9b85f4b6ec2ed3 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.018 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 LK04_RS05645 5f917c24a2fa404a979e2f8107e8ba94 345 PIRSF PIRSF006268 2 341 7.6E-85 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 LK04_RS05645 5f917c24a2fa404a979e2f8107e8ba94 345 SUPERFAMILY SSF143631 29 339 5.23E-90 T 22-04-2016 IPR003374 ApbE-like domain LK04_RS05645 5f917c24a2fa404a979e2f8107e8ba94 345 PANTHER PTHR30040:SF3 6 343 1.1E-153 T 22-04-2016 LK04_RS05645 5f917c24a2fa404a979e2f8107e8ba94 345 PANTHER PTHR30040 6 343 1.1E-153 T 22-04-2016 LK04_RS05645 5f917c24a2fa404a979e2f8107e8ba94 345 Pfam PF02424 ApbE family 35 317 1.1E-77 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 PANTHER PTHR32338 1 334 7.9E-163 T 22-04-2016 LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 SUPERFAMILY SSF51735 2 180 1.48E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 1.1E-123 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 2.4E-33 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 SMART SM00859 3 146 8.6E-52 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 Gene3D G3DSA:3.30.360.10 163 308 5.4E-48 T 22-04-2016 LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.972 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 Gene3D G3DSA:3.40.50.720 1 162 1.2E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 SUPERFAMILY SSF55347 154 308 2.94E-49 T 22-04-2016 LK04_RS19660 37f2681728f01d170b2020a67b2525c8 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 3.3E-14 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS00400 3b4a86de72ce4efc740d4792111ebaad 319 PANTHER PTHR10996 7 316 1.7E-110 T 22-04-2016 LK04_RS00400 3b4a86de72ce4efc740d4792111ebaad 319 SUPERFAMILY SSF52283 4 127 6.59E-21 T 22-04-2016 LK04_RS00400 3b4a86de72ce4efc740d4792111ebaad 319 Gene3D G3DSA:3.40.50.720 115 289 4.1E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00400 3b4a86de72ce4efc740d4792111ebaad 319 PANTHER PTHR10996:SF127 7 316 1.7E-110 T 22-04-2016 LK04_RS00400 3b4a86de72ce4efc740d4792111ebaad 319 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 37 313 3.1E-10 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LK04_RS00400 3b4a86de72ce4efc740d4792111ebaad 319 SUPERFAMILY SSF51735 110 288 2.78E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00400 3b4a86de72ce4efc740d4792111ebaad 319 Gene3D G3DSA:3.40.50.720 19 114 7.2E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00400 3b4a86de72ce4efc740d4792111ebaad 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 288 5.1E-57 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS05700 2933581156ea9151fe9962796aae2da1 240 SMART SM00363 1 60 9.0E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS05700 2933581156ea9151fe9962796aae2da1 240 Gene3D G3DSA:3.10.290.10 1 64 8.5E-22 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS05700 2933581156ea9151fe9962796aae2da1 240 SUPERFAMILY SSF55174 1 83 9.86E-15 T 22-04-2016 LK04_RS05700 2933581156ea9151fe9962796aae2da1 240 Pfam PF00849 RNA pseudouridylate synthase 62 192 8.8E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05700 2933581156ea9151fe9962796aae2da1 240 PANTHER PTHR21600 1 230 3.4E-73 T 22-04-2016 LK04_RS05700 2933581156ea9151fe9962796aae2da1 240 SUPERFAMILY SSF55120 61 227 2.88E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05700 2933581156ea9151fe9962796aae2da1 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 2.4E-54 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LK04_RS05700 2933581156ea9151fe9962796aae2da1 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LK04_RS05700 2933581156ea9151fe9962796aae2da1 240 Pfam PF01479 S4 domain 1 47 5.1E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS05700 2933581156ea9151fe9962796aae2da1 240 PANTHER PTHR21600:SF19 1 230 3.4E-73 T 22-04-2016 LK04_RS08015 3e1dd55bc8c7a1f45982d7507616fbaf 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 156 7.7E-20 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LK04_RS08015 3e1dd55bc8c7a1f45982d7507616fbaf 347 Hamap MF_00625 Selenide, water dikinase [selD]. 4 346 44.724 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 LK04_RS08015 3e1dd55bc8c7a1f45982d7507616fbaf 347 SUPERFAMILY SSF56042 164 337 1.57E-47 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS08015 3e1dd55bc8c7a1f45982d7507616fbaf 347 PIRSF PIRSF036407 1 346 1.6E-117 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 LK04_RS08015 3e1dd55bc8c7a1f45982d7507616fbaf 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 312 5.8E-136 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 LK04_RS08015 3e1dd55bc8c7a1f45982d7507616fbaf 347 Gene3D G3DSA:3.30.1330.10 28 158 6.7E-33 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LK04_RS08015 3e1dd55bc8c7a1f45982d7507616fbaf 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 337 2.7E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS08015 3e1dd55bc8c7a1f45982d7507616fbaf 347 PANTHER PTHR10256 1 331 8.8E-144 T 22-04-2016 LK04_RS08015 3e1dd55bc8c7a1f45982d7507616fbaf 347 SUPERFAMILY SSF55326 6 157 4.58E-42 T 22-04-2016 LK04_RS08015 3e1dd55bc8c7a1f45982d7507616fbaf 347 Gene3D G3DSA:3.90.650.10 175 341 2.1E-15 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS16110 3b621b6f5bbaefc22d36241c40ebda5b 260 SUPERFAMILY SSF53850 24 258 3.55E-68 T 22-04-2016 LK04_RS16110 3b621b6f5bbaefc22d36241c40ebda5b 260 PIRSF PIRSF002854 1 260 2.8E-95 T 22-04-2016 IPR004872 Lipoprotein NlpA family LK04_RS16110 3b621b6f5bbaefc22d36241c40ebda5b 260 PANTHER PTHR30429 1 260 3.1E-110 T 22-04-2016 IPR004872 Lipoprotein NlpA family LK04_RS16110 3b621b6f5bbaefc22d36241c40ebda5b 260 Pfam PF03180 NLPA lipoprotein 24 258 2.8E-79 T 22-04-2016 IPR004872 Lipoprotein NlpA family LK04_RS16110 3b621b6f5bbaefc22d36241c40ebda5b 260 Gene3D G3DSA:3.40.190.10 100 210 1.0E-44 T 22-04-2016 LK04_RS16110 3b621b6f5bbaefc22d36241c40ebda5b 260 PANTHER PTHR30429:SF0 1 260 3.1E-110 T 22-04-2016 LK04_RS09690 9e7c68f5e0cc34adda450c93cbf6f184 394 Gene3D G3DSA:1.20.1250.20 213 385 3.9E-7 T 22-04-2016 LK04_RS09690 9e7c68f5e0cc34adda450c93cbf6f184 394 PANTHER PTHR11360 4 382 4.5E-47 T 22-04-2016 LK04_RS09690 9e7c68f5e0cc34adda450c93cbf6f184 394 Pfam PF07690 Major Facilitator Superfamily 16 312 2.1E-8 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS09690 9e7c68f5e0cc34adda450c93cbf6f184 394 PANTHER PTHR11360:SF126 4 382 4.5E-47 T 22-04-2016 LK04_RS09690 9e7c68f5e0cc34adda450c93cbf6f184 394 Gene3D G3DSA:1.20.1250.20 14 192 1.9E-10 T 22-04-2016 LK04_RS09690 9e7c68f5e0cc34adda450c93cbf6f184 394 SUPERFAMILY SSF103473 9 388 1.05E-29 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS16995 50b76803a697f51342b89e2f227c3949 372 Gene3D G3DSA:1.10.10.10 8 69 1.2E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16995 50b76803a697f51342b89e2f227c3949 372 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 49 4.0E-6 T 22-04-2016 LK04_RS16995 50b76803a697f51342b89e2f227c3949 372 Gene3D G3DSA:3.30.420.40 206 330 7.5E-26 T 22-04-2016 LK04_RS16995 50b76803a697f51342b89e2f227c3949 372 SUPERFAMILY SSF46785 8 69 8.51E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16995 50b76803a697f51342b89e2f227c3949 372 PANTHER PTHR18964:SF123 51 304 7.6E-49 T 22-04-2016 LK04_RS16995 50b76803a697f51342b89e2f227c3949 372 Gene3D G3DSA:3.30.420.40 70 205 1.6E-35 T 22-04-2016 LK04_RS16995 50b76803a697f51342b89e2f227c3949 372 SUPERFAMILY SSF53067 75 358 4.59E-39 T 22-04-2016 LK04_RS16995 50b76803a697f51342b89e2f227c3949 372 PANTHER PTHR18964 51 304 7.6E-49 T 22-04-2016 LK04_RS16995 50b76803a697f51342b89e2f227c3949 372 Pfam PF00480 ROK family 76 335 4.0E-36 T 22-04-2016 IPR000600 ROK family LK04_RS18455 f3ee62311260a7c188a276fd6615bfb5 237 Pfam PF11254 Protein of unknown function (DUF3053) 19 234 3.4E-89 T 22-04-2016 IPR021413 Protein of unknown function DUF3053 LK04_RS17545 2861ee0e3b915bc9aff6cbd80a5383db 82 PANTHER PTHR33279 8 81 1.6E-48 T 22-04-2016 LK04_RS17545 2861ee0e3b915bc9aff6cbd80a5383db 82 SUPERFAMILY SSF64307 6 80 3.01E-26 T 22-04-2016 IPR001455 TusA-like domain LK04_RS17545 2861ee0e3b915bc9aff6cbd80a5383db 82 Gene3D G3DSA:3.30.110.40 6 80 3.0E-31 T 22-04-2016 IPR001455 TusA-like domain LK04_RS17545 2861ee0e3b915bc9aff6cbd80a5383db 82 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.155 T 22-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 LK04_RS17545 2861ee0e3b915bc9aff6cbd80a5383db 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 22-04-2016 IPR001455 TusA-like domain LK04_RS17545 2861ee0e3b915bc9aff6cbd80a5383db 82 Pfam PF01206 Sulfurtransferase TusA 10 79 4.9E-25 T 22-04-2016 IPR001455 TusA-like domain LK04_RS17545 2861ee0e3b915bc9aff6cbd80a5383db 82 PANTHER PTHR33279:SF5 8 81 1.6E-48 T 22-04-2016 LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 PANTHER PTHR30115 1 112 6.3E-68 T 22-04-2016 LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 Gene3D G3DSA:3.30.70.120 1 112 4.0E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 PIRSF PIRSF039144 1 112 2.0E-57 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 SMART SM00938 4 105 1.2E-67 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 PRINTS PR00340 P-II protein signature 83 103 1.5E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 PRINTS PR00340 P-II protein signature 2 17 1.5E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 PRINTS PR00340 P-II protein signature 52 75 1.5E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 PRINTS PR00340 P-II protein signature 23 41 1.5E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 SUPERFAMILY SSF54913 1 112 1.11E-46 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LK04_RS04100 eec8d2f98e107b94c1b0595fcd321df1 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 PANTHER PTHR10657:SF13 1 175 2.9E-224 T 22-04-2016 LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 PANTHER PTHR10657:SF13 203 516 2.9E-224 T 22-04-2016 LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 Pfam PF13624 SurA N-terminal domain 1 165 9.5E-52 T 22-04-2016 LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 Pfam PF13145 PPIC-type PPIASE domain 247 368 1.4E-23 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 Gene3D G3DSA:3.10.50.40 259 380 5.0E-28 T 22-04-2016 LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 SUPERFAMILY SSF109998 203 240 1.44E-36 T 22-04-2016 IPR027304 Trigger factor/SurA domain LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 SUPERFAMILY SSF109998 39 169 1.44E-36 T 22-04-2016 IPR027304 Trigger factor/SurA domain LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 PANTHER PTHR10657 1 175 2.9E-224 T 22-04-2016 LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 PANTHER PTHR10657 203 516 2.9E-224 T 22-04-2016 LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 SUPERFAMILY SSF54534 225 355 1.77E-22 T 22-04-2016 LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 Gene3D G3DSA:1.10.3120.10 43 124 8.3E-5 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LK04_RS13960 2343701a525a8947f05ef63304810ba9 622 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 167 174 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 88 7.9E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 PIRSF PIRSF000349 1 205 3.1E-80 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 SUPERFAMILY SSF54719 94 204 4.98E-46 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 200 4.1E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 PANTHER PTHR11404 1 205 2.6E-108 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 SUPERFAMILY SSF46609 1 89 1.44E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.6E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 PRINTS PR01703 Manganese superoxide dismutase signature 165 177 1.6E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.6E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 1.6E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 1.6E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LK04_RS18485 c5bf2758f03c8353fddc4fefdbde57f8 205 Gene3D G3DSA:1.10.287.990 20 89 3.6E-31 T 22-04-2016 LK04_RS16350 376a5a7f6608a42ebd006f5bd678c85c 294 Pfam PF01136 Peptidase family U32 92 210 2.8E-11 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS16350 376a5a7f6608a42ebd006f5bd678c85c 294 PANTHER PTHR30217 1 291 1.4E-172 T 22-04-2016 LK04_RS16350 376a5a7f6608a42ebd006f5bd678c85c 294 PANTHER PTHR30217:SF8 1 291 1.4E-172 T 22-04-2016 LK04_RS10770 8d1055b5a364b80466cb4849b5191086 210 PANTHER PTHR11260:SF178 2 203 8.4E-65 T 22-04-2016 LK04_RS10770 8d1055b5a364b80466cb4849b5191086 210 SUPERFAMILY SSF47616 76 202 1.05E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS10770 8d1055b5a364b80466cb4849b5191086 210 Gene3D G3DSA:3.40.30.10 3 87 1.2E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS10770 8d1055b5a364b80466cb4849b5191086 210 SUPERFAMILY SSF52833 2 83 8.97E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS10770 8d1055b5a364b80466cb4849b5191086 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 195 2.6E-13 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal LK04_RS10770 8d1055b5a364b80466cb4849b5191086 210 PANTHER PTHR11260 2 203 8.4E-65 T 22-04-2016 LK04_RS10770 8d1055b5a364b80466cb4849b5191086 210 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 79 1.0E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS10770 8d1055b5a364b80466cb4849b5191086 210 Gene3D G3DSA:1.20.1050.10 88 199 1.1E-36 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS19865 51904bb99fa4824e0028685eca8b40a1 190 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 185 25.122 T 22-04-2016 IPR022929 Putative manganese efflux pump MntP LK04_RS19865 51904bb99fa4824e0028685eca8b40a1 190 Pfam PF02659 Putative manganese efflux pump 31 182 6.1E-52 T 22-04-2016 IPR003810 Putative manganese efflux pump LK04_RS19865 51904bb99fa4824e0028685eca8b40a1 190 PANTHER PTHR35529 2 189 2.3E-72 T 22-04-2016 LK04_RS07725 48eb31edde51bb2ff46e91f0e33012a5 215 Gene3D G3DSA:3.60.21.10 3 214 2.3E-43 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS07725 48eb31edde51bb2ff46e91f0e33012a5 215 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 71 76 - T 22-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 LK04_RS07725 48eb31edde51bb2ff46e91f0e33012a5 215 PANTHER PTHR24032:SF33 1 209 8.9E-45 T 22-04-2016 LK04_RS07725 48eb31edde51bb2ff46e91f0e33012a5 215 Pfam PF00149 Calcineurin-like phosphoesterase 13 143 1.2E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LK04_RS07725 48eb31edde51bb2ff46e91f0e33012a5 215 SUPERFAMILY SSF56300 8 214 6.33E-42 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS07725 48eb31edde51bb2ff46e91f0e33012a5 215 PANTHER PTHR24032 1 209 8.9E-45 T 22-04-2016 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 PANTHER PTHR11019:SF118 5 112 2.7E-43 T 22-04-2016 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 5.2E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 5.2E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 PANTHER PTHR11019 5 112 2.7E-43 T 22-04-2016 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 Pfam PF12833 Helix-turn-helix domain 27 106 2.9E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 SUPERFAMILY SSF46689 5 56 4.66E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 Gene3D G3DSA:1.10.10.60 1 57 5.7E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 Gene3D G3DSA:1.10.10.60 58 115 3.4E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 SMART SM00342 21 104 4.8E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS17035 48904f0d7412314ad5ba7ccb4421bc26 122 SUPERFAMILY SSF46689 57 108 4.04E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS14050 bc052ec23a435b316ab70615a0f052a9 163 SUPERFAMILY SSF89963 92 163 6.02E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 LK04_RS14050 bc052ec23a435b316ab70615a0f052a9 163 Gene3D G3DSA:3.30.70.990 9 97 1.2E-35 T 22-04-2016 LK04_RS14050 bc052ec23a435b316ab70615a0f052a9 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 8.1E-66 T 22-04-2016 IPR007551 Protein of unknown function DUF520 LK04_RS14050 bc052ec23a435b316ab70615a0f052a9 163 SUPERFAMILY SSF89963 2 89 1.83E-31 T 22-04-2016 IPR007551 Protein of unknown function DUF520 LK04_RS14050 bc052ec23a435b316ab70615a0f052a9 163 PANTHER PTHR30476 1 163 6.9E-95 T 22-04-2016 LK04_RS14050 bc052ec23a435b316ab70615a0f052a9 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 29.995 T 22-04-2016 IPR007551 Protein of unknown function DUF520 LK04_RS14050 bc052ec23a435b316ab70615a0f052a9 163 PANTHER PTHR30476:SF0 1 163 6.9E-95 T 22-04-2016 LK04_RS14050 bc052ec23a435b316ab70615a0f052a9 163 Gene3D G3DSA:3.30.70.860 98 163 1.6E-34 T 22-04-2016 LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.8E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.8E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.8E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 Pfam PF00106 short chain dehydrogenase 2 185 1.7E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 SUPERFAMILY SSF51735 1 198 2.96E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.1E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PANTHER PTHR24322 147 179 1.6E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PANTHER PTHR24322 6 131 1.6E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 Gene3D G3DSA:3.40.50.720 2 196 6.6E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PANTHER PTHR24322:SF57 147 179 1.6E-41 T 22-04-2016 LK04_RS00265 baa0516d3f3d47a7df39559bd2b50d81 275 PANTHER PTHR24322:SF57 6 131 1.6E-41 T 22-04-2016 LK04_RS14205 62dbef046cfd7d8c0cf7c5ee731a4ebb 403 PANTHER PTHR30337:SF0 1 392 2.6E-123 T 22-04-2016 LK04_RS14205 62dbef046cfd7d8c0cf7c5ee731a4ebb 403 Pfam PF00149 Calcineurin-like phosphoesterase 1 229 9.1E-16 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LK04_RS14205 62dbef046cfd7d8c0cf7c5ee731a4ebb 403 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 257 2.4E-81 T 22-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 LK04_RS14205 62dbef046cfd7d8c0cf7c5ee731a4ebb 403 PANTHER PTHR30337 1 392 2.6E-123 T 22-04-2016 LK04_RS14205 62dbef046cfd7d8c0cf7c5ee731a4ebb 403 SUPERFAMILY SSF56300 1 338 4.97E-61 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS14205 62dbef046cfd7d8c0cf7c5ee731a4ebb 403 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 279 376 2.3E-26 T 22-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain LK04_RS14205 62dbef046cfd7d8c0cf7c5ee731a4ebb 403 Gene3D G3DSA:3.60.21.10 1 267 5.3E-67 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 3.2E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 198 218 3.2E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 449 478 3.2E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 3.2E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 295 324 3.2E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 Gene3D G3DSA:1.10.287.950 289 493 1.3E-57 T 22-04-2016 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 PANTHER PTHR32089 165 524 7.0E-126 T 22-04-2016 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 SMART SM00304 221 273 3.6E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 520 5.8E-52 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 SMART SM00283 274 521 3.0E-76 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 SUPERFAMILY SSF58104 241 522 3.27E-68 T 22-04-2016 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 Pfam PF00672 HAMP domain 201 269 9.5E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS15910 cc81d52471f4e4b08f4bbf030552b8dc 528 PANTHER PTHR32089:SF63 165 524 7.0E-126 T 22-04-2016 LK04_RS13160 6bd54b02c5e1af00547765bc5c8c4f09 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 233 9.5E-57 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LK04_RS13160 6bd54b02c5e1af00547765bc5c8c4f09 247 SUPERFAMILY SSF102705 1 246 2.88E-83 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LK04_RS13160 6bd54b02c5e1af00547765bc5c8c4f09 247 Gene3D G3DSA:3.40.1390.30 1 107 1.3E-35 T 22-04-2016 LK04_RS13160 6bd54b02c5e1af00547765bc5c8c4f09 247 PANTHER PTHR13799 1 243 5.0E-89 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LK04_RS13160 6bd54b02c5e1af00547765bc5c8c4f09 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 5.6E-74 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LK04_RS13160 6bd54b02c5e1af00547765bc5c8c4f09 247 Gene3D G3DSA:3.40.1390.30 108 214 4.4E-29 T 22-04-2016 LK04_RS02040 d6a1f9086dae492094db6f1cf3af23f2 254 PANTHER PTHR18966 18 251 8.7E-92 T 22-04-2016 LK04_RS02040 d6a1f9086dae492094db6f1cf3af23f2 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 251 4.3E-36 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS02040 d6a1f9086dae492094db6f1cf3af23f2 254 SUPERFAMILY SSF53850 3 251 5.07E-46 T 22-04-2016 LK04_RS02040 d6a1f9086dae492094db6f1cf3af23f2 254 PANTHER PTHR18966:SF243 18 251 8.7E-92 T 22-04-2016 LK04_RS02040 d6a1f9086dae492094db6f1cf3af23f2 254 Gene3D G3DSA:3.40.190.10 10 153 7.1E-27 T 22-04-2016 LK04_RS02040 d6a1f9086dae492094db6f1cf3af23f2 254 SMART SM00062 30 253 5.7E-29 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 Gene3D G3DSA:3.30.465.10 198 283 7.7E-32 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 SUPERFAMILY SSF54631 66 202 1.17E-32 T 22-04-2016 LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 PANTHER PTHR22777:SF17 18 293 6.0E-127 T 22-04-2016 LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 SMART SM01091 205 283 1.1E-30 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 SUPERFAMILY SSF56176 203 291 1.85E-24 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 Gene3D G3DSA:3.10.580.10 55 197 5.0E-23 T 22-04-2016 LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 Pfam PF00571 CBS domain 140 189 3.4E-5 T 22-04-2016 IPR000644 CBS domain LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 Pfam PF00571 CBS domain 69 125 5.3E-8 T 22-04-2016 IPR000644 CBS domain LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 Pfam PF03471 Transporter associated domain 206 281 1.3E-22 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 SMART SM00116 78 127 2.2 T 22-04-2016 IPR000644 CBS domain LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 SMART SM00116 141 189 1.1 T 22-04-2016 IPR000644 CBS domain LK04_RS13315 fc55f4ad5c5498e65414f60700f99ea0 293 PANTHER PTHR22777 18 293 6.0E-127 T 22-04-2016 LK04_RS05435 c5c4e3ecb1c2b812a9ef2df8505e47b2 298 PANTHER PTHR11092:SF0 1 296 2.6E-144 T 22-04-2016 LK04_RS05435 c5c4e3ecb1c2b812a9ef2df8505e47b2 298 PANTHER PTHR11092 1 296 2.6E-144 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 LK04_RS05435 c5c4e3ecb1c2b812a9ef2df8505e47b2 298 SUPERFAMILY SSF51735 1 295 8.95E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05435 c5c4e3ecb1c2b812a9ef2df8505e47b2 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 215 4.8E-18 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LK04_RS05435 c5c4e3ecb1c2b812a9ef2df8505e47b2 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 293 1.0E-107 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 LK04_RS05435 c5c4e3ecb1c2b812a9ef2df8505e47b2 298 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 7.4E-18 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 LK04_RS05435 c5c4e3ecb1c2b812a9ef2df8505e47b2 298 Gene3D G3DSA:3.40.50.720 1 249 1.6E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 PANTHER PTHR11709 62 343 1.2E-104 T 22-04-2016 LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 PANTHER PTHR11709 380 542 1.2E-104 T 22-04-2016 LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 SUPERFAMILY SSF49503 172 309 3.16E-28 T 22-04-2016 IPR008972 Cupredoxin LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 SUPERFAMILY SSF49503 419 542 8.75E-26 T 22-04-2016 IPR008972 Cupredoxin LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 Gene3D G3DSA:2.60.40.420 331 363 2.2E-28 T 22-04-2016 IPR008972 Cupredoxin LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 Gene3D G3DSA:2.60.40.420 426 542 2.2E-28 T 22-04-2016 IPR008972 Cupredoxin LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 Pfam PF00394 Multicopper oxidase 232 298 1.6E-5 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 Gene3D G3DSA:2.60.40.420 171 309 1.6E-28 T 22-04-2016 IPR008972 Cupredoxin LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 PANTHER PTHR11709:SF2 62 343 1.2E-104 T 22-04-2016 LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 PANTHER PTHR11709:SF2 380 542 1.2E-104 T 22-04-2016 LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 ProSitePatterns PS00080 Multicopper oxidases signature 2. 525 536 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 22 4.7E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 Pfam PF07732 Multicopper oxidase 60 166 2.6E-29 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 SUPERFAMILY SSF49503 32 166 1.27E-30 T 22-04-2016 IPR008972 Cupredoxin LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 Pfam PF07731 Multicopper oxidase 431 542 1.9E-23 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 LK04_RS15160 9620c3ddd4d9038a9a795e2461d10c8f 543 Gene3D G3DSA:2.60.40.420 32 170 5.1E-34 T 22-04-2016 IPR008972 Cupredoxin LK04_RS10155 a52876ad3e81892be4cf535f04ee1e71 229 Gene3D G3DSA:3.40.50.880 2 228 2.3E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS10155 a52876ad3e81892be4cf535f04ee1e71 229 PANTHER PTHR11550 53 206 1.4E-32 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LK04_RS10155 a52876ad3e81892be4cf535f04ee1e71 229 SUPERFAMILY SSF52317 4 228 2.37E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS10155 a52876ad3e81892be4cf535f04ee1e71 229 Pfam PF00117 Glutamine amidotransferase class-I 30 203 3.2E-13 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LK04_RS08190 fdb5ced5076e0dbc71b22a91a225639f 332 SUPERFAMILY SSF47648 1 67 1.83E-17 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LK04_RS08190 fdb5ced5076e0dbc71b22a91a225639f 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.459 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 LK04_RS08190 fdb5ced5076e0dbc71b22a91a225639f 332 PANTHER PTHR11922 67 328 6.7E-127 T 22-04-2016 LK04_RS08190 fdb5ced5076e0dbc71b22a91a225639f 332 SUPERFAMILY SSF52418 70 327 1.83E-93 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LK04_RS08190 fdb5ced5076e0dbc71b22a91a225639f 332 Gene3D G3DSA:1.20.970.10 2 68 7.7E-27 T 22-04-2016 LK04_RS08190 fdb5ced5076e0dbc71b22a91a225639f 332 Gene3D G3DSA:3.40.1030.10 71 328 3.4E-101 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LK04_RS08190 fdb5ced5076e0dbc71b22a91a225639f 332 PANTHER PTHR11922:SF25 67 328 6.7E-127 T 22-04-2016 LK04_RS08190 fdb5ced5076e0dbc71b22a91a225639f 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 328 1.2E-128 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 LK04_RS08190 fdb5ced5076e0dbc71b22a91a225639f 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 62 6.7E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LK04_RS08190 fdb5ced5076e0dbc71b22a91a225639f 332 Pfam PF00591 Glycosyl transferase family, a/b domain 73 322 3.8E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LK04_RS17365 503020777dc3e4afebd6b89c70f2103a 136 PANTHER PTHR37819:SF1 1 136 4.5E-48 T 22-04-2016 LK04_RS17365 503020777dc3e4afebd6b89c70f2103a 136 Hamap MF_01048 Protein PsiE [psiE]. 1 136 25.409 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 LK04_RS17365 503020777dc3e4afebd6b89c70f2103a 136 PIRSF PIRSF029598 1 136 4.1E-49 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 LK04_RS17365 503020777dc3e4afebd6b89c70f2103a 136 PANTHER PTHR37819 1 136 4.5E-48 T 22-04-2016 LK04_RS17365 503020777dc3e4afebd6b89c70f2103a 136 Pfam PF06146 Phosphate-starvation-inducible E 61 123 2.3E-16 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like LK04_RS07745 917a155a7301fdb4dd04a5ee68e406ed 166 PANTHER PTHR21021 1 144 2.4E-53 T 22-04-2016 LK04_RS07745 917a155a7301fdb4dd04a5ee68e406ed 166 Gene3D G3DSA:3.30.450.40 2 148 3.1E-48 T 22-04-2016 IPR029016 GAF domain-like LK04_RS07745 917a155a7301fdb4dd04a5ee68e406ed 166 SMART SM00065 9 162 4.4E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 LK04_RS07745 917a155a7301fdb4dd04a5ee68e406ed 166 SUPERFAMILY SSF55781 2 147 1.42E-39 T 22-04-2016 IPR029016 GAF domain-like LK04_RS07745 917a155a7301fdb4dd04a5ee68e406ed 166 Pfam PF13185 GAF domain 42 144 3.1E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 LK04_RS15435 d17cb09595057aa42f00b1366ff7d48d 588 Gene3D G3DSA:3.90.1310.10 142 241 6.4E-32 T 22-04-2016 LK04_RS15435 d17cb09595057aa42f00b1366ff7d48d 588 PANTHER PTHR30627 9 587 3.5E-246 T 22-04-2016 LK04_RS15435 d17cb09595057aa42f00b1366ff7d48d 588 Pfam PF03717 Penicillin-binding Protein dimerisation domain 68 220 7.6E-18 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LK04_RS15435 d17cb09595057aa42f00b1366ff7d48d 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 554 9.1E-80 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LK04_RS15435 d17cb09595057aa42f00b1366ff7d48d 588 SUPERFAMILY SSF56601 235 563 2.25E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS15435 d17cb09595057aa42f00b1366ff7d48d 588 Gene3D G3DSA:3.40.710.10 242 560 5.8E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS15435 d17cb09595057aa42f00b1366ff7d48d 588 SUPERFAMILY SSF56519 63 234 1.83E-44 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LK04_RS15435 d17cb09595057aa42f00b1366ff7d48d 588 PANTHER PTHR30627:SF1 9 587 3.5E-246 T 22-04-2016 LK04_RS14885 f7985006436e7de5cb0f3d7408632cef 102 Pfam PF00034 Cytochrome c 29 100 1.8E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS14885 f7985006436e7de5cb0f3d7408632cef 102 PRINTS PR00605 Class IC cytochrome C signature 75 97 5.1E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 LK04_RS14885 f7985006436e7de5cb0f3d7408632cef 102 PRINTS PR00605 Class IC cytochrome C signature 30 41 5.1E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 LK04_RS14885 f7985006436e7de5cb0f3d7408632cef 102 Gene3D G3DSA:1.10.760.10 15 100 5.0E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS14885 f7985006436e7de5cb0f3d7408632cef 102 PANTHER PTHR33751 5 102 3.5E-26 T 22-04-2016 LK04_RS14885 f7985006436e7de5cb0f3d7408632cef 102 PANTHER PTHR33751:SF3 5 102 3.5E-26 T 22-04-2016 LK04_RS14885 f7985006436e7de5cb0f3d7408632cef 102 SUPERFAMILY SSF46626 9 100 2.01E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LK04_RS12595 2bcef52afc08837efa62685996a41e0b 453 SUPERFAMILY SSF103378 3 446 5.75E-106 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 LK04_RS12595 2bcef52afc08837efa62685996a41e0b 453 Pfam PF03972 MmgE/PrpD family 6 438 1.9E-117 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 LK04_RS12595 2bcef52afc08837efa62685996a41e0b 453 PANTHER PTHR16943:SF8 1 451 1.8E-95 T 22-04-2016 LK04_RS12595 2bcef52afc08837efa62685996a41e0b 453 Gene3D G3DSA:3.30.1330.120 270 404 1.5E-18 T 22-04-2016 LK04_RS12595 2bcef52afc08837efa62685996a41e0b 453 PANTHER PTHR16943 1 451 1.8E-95 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 LK04_RS18365 fdc4548cc865b1b99234c83f7bc24b8a 563 SUPERFAMILY SSF53649 250 543 1.57E-18 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LK04_RS18365 fdc4548cc865b1b99234c83f7bc24b8a 563 PANTHER PTHR30443:SF3 1 557 0.0 T 22-04-2016 LK04_RS18365 fdc4548cc865b1b99234c83f7bc24b8a 563 PANTHER PTHR30443 1 557 0.0 T 22-04-2016 LK04_RS18365 fdc4548cc865b1b99234c83f7bc24b8a 563 Pfam PF08019 Domain of unknown function (DUF1705) 57 195 2.3E-19 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 LK04_RS18365 fdc4548cc865b1b99234c83f7bc24b8a 563 Gene3D G3DSA:3.40.720.10 250 543 1.3E-13 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LK04_RS18365 fdc4548cc865b1b99234c83f7bc24b8a 563 Pfam PF00884 Sulfatase 250 538 5.9E-42 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 Gene3D G3DSA:1.10.1040.10 263 452 7.1E-53 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 PANTHER PTHR30562:SF4 4 454 1.2E-166 T 22-04-2016 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 196 435 3.2E-73 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 Gene3D G3DSA:3.40.50.720 5 260 8.9E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 PRINTS PR00084 Mannitol dehydrogenase signature 7 17 3.2E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 PRINTS PR00084 Mannitol dehydrogenase signature 197 210 3.2E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 PRINTS PR00084 Mannitol dehydrogenase signature 157 170 3.2E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 PRINTS PR00084 Mannitol dehydrogenase signature 227 242 3.2E-15 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 7 166 2.1E-32 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 SUPERFAMILY SSF48179 263 453 7.14E-45 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 PANTHER PTHR30562 4 454 1.2E-166 T 22-04-2016 LK04_RS05420 9375216d1eae982b209902d7d43aa87a 462 SUPERFAMILY SSF51735 6 260 1.06E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 PANTHER PTHR11236 1 513 4.6E-262 T 22-04-2016 LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 Pfam PF00425 chorismate binding enzyme 242 502 9.2E-84 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 PIRSF PIRSF001373 1 520 9.5E-249 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 Gene3D G3DSA:3.60.120.10 6 517 1.4E-159 T 22-04-2016 IPR005801 ADC synthase GO:0009058 LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 PANTHER PTHR11236:SF22 1 513 4.6E-262 T 22-04-2016 LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 4.1E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 4.1E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 4.1E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 4.1E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 4.5E-244 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 191 8.5E-15 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LK04_RS08200 eb7cdf8e39d586f562c20cac20b939a8 520 SUPERFAMILY SSF56322 9 516 2.49E-162 T 22-04-2016 IPR005801 ADC synthase GO:0009058 LK04_RS03505 5d155dd8242f5b9ab11339b773e44d47 158 Pfam PF02542 YgbB family 1 154 1.2E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS03505 5d155dd8242f5b9ab11339b773e44d47 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.464 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS03505 5d155dd8242f5b9ab11339b773e44d47 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 2.1E-71 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS03505 5d155dd8242f5b9ab11339b773e44d47 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS03505 5d155dd8242f5b9ab11339b773e44d47 158 PANTHER PTHR32125 1 158 2.7E-62 T 22-04-2016 LK04_RS03505 5d155dd8242f5b9ab11339b773e44d47 158 SUPERFAMILY SSF69765 1 156 1.27E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS03505 5d155dd8242f5b9ab11339b773e44d47 158 Gene3D G3DSA:3.30.1330.50 1 156 1.2E-72 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LK04_RS15625 06b0136e876307507fe0beacc0a9e2cb 297 Gene3D G3DSA:1.10.10.10 3 83 9.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15625 06b0136e876307507fe0beacc0a9e2cb 297 PANTHER PTHR30293:SF2 2 296 1.8E-201 T 22-04-2016 LK04_RS15625 06b0136e876307507fe0beacc0a9e2cb 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.2E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS15625 06b0136e876307507fe0beacc0a9e2cb 297 PANTHER PTHR30293 2 296 1.8E-201 T 22-04-2016 LK04_RS15625 06b0136e876307507fe0beacc0a9e2cb 297 SUPERFAMILY SSF53850 90 287 4.81E-25 T 22-04-2016 LK04_RS15625 06b0136e876307507fe0beacc0a9e2cb 297 SUPERFAMILY SSF46785 2 85 1.41E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15625 06b0136e876307507fe0beacc0a9e2cb 297 Pfam PF03466 LysR substrate binding domain 96 284 5.9E-12 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS15625 06b0136e876307507fe0beacc0a9e2cb 297 Gene3D G3DSA:3.40.190.10 97 227 7.8E-8 T 22-04-2016 LK04_RS08430 220100d5fc283be086e902f73f0f811b 167 Pfam PF08534 Redoxin 20 163 1.7E-29 T 22-04-2016 IPR013740 Redoxin GO:0016491 LK04_RS08430 220100d5fc283be086e902f73f0f811b 167 PANTHER PTHR10681 1 167 6.6E-55 T 22-04-2016 LK04_RS08430 220100d5fc283be086e902f73f0f811b 167 PANTHER PTHR10681:SF81 1 167 6.6E-55 T 22-04-2016 LK04_RS08430 220100d5fc283be086e902f73f0f811b 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.972 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 LK04_RS08430 220100d5fc283be086e902f73f0f811b 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 LK04_RS08430 220100d5fc283be086e902f73f0f811b 167 Gene3D G3DSA:3.40.30.10 4 167 4.2E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS08430 220100d5fc283be086e902f73f0f811b 167 SUPERFAMILY SSF52833 4 164 4.17E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS02665 19a5672bf939f8c736448bc77d1262d8 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 31.05 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 LK04_RS02665 19a5672bf939f8c736448bc77d1262d8 239 Gene3D G3DSA:3.40.50.150 56 193 5.7E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS02665 19a5672bf939f8c736448bc77d1262d8 239 PANTHER PTHR23417:SF14 9 239 4.9E-91 T 22-04-2016 LK04_RS02665 19a5672bf939f8c736448bc77d1262d8 239 Pfam PF02390 Putative methyltransferase 64 233 4.0E-62 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 LK04_RS02665 19a5672bf939f8c736448bc77d1262d8 239 SUPERFAMILY SSF53335 18 237 6.75E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS02665 19a5672bf939f8c736448bc77d1262d8 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 50 238 1.1E-70 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 LK04_RS02665 19a5672bf939f8c736448bc77d1262d8 239 PANTHER PTHR23417 9 239 4.9E-91 T 22-04-2016 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 Gene3D G3DSA:1.10.287.610 100 152 4.5E-27 T 22-04-2016 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 Gene3D G3DSA:3.40.50.10490 158 236 1.1E-67 T 22-04-2016 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 Gene3D G3DSA:3.40.50.10490 23 99 1.1E-67 T 22-04-2016 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 8.2E-108 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 SUPERFAMILY SSF52313 6 233 1.28E-95 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.375 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 PRINTS PR00395 Ribosomal protein S2 signature 6 24 7.21E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 PRINTS PR00395 Ribosomal protein S2 signature 196 210 7.21E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 PRINTS PR00395 Ribosomal protein S2 signature 87 104 7.21E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 PRINTS PR00395 Ribosomal protein S2 signature 37 46 7.21E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 PRINTS PR00395 Ribosomal protein S2 signature 175 186 7.21E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 PRINTS PR00395 Ribosomal protein S2 signature 158 175 7.21E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 PANTHER PTHR12534 1 239 9.9E-125 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LK04_RS14985 9698f1a25971896e631ac142c10c5c26 239 Pfam PF00318 Ribosomal protein S2 9 224 1.5E-93 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS08835 f91d59f7f36b0a20c6ca33b7192f2c85 495 PANTHER PTHR10196:SF73 5 494 3.8E-98 T 22-04-2016 LK04_RS08835 f91d59f7f36b0a20c6ca33b7192f2c85 495 PIRSF PIRSF000538 1 493 2.7E-86 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS08835 f91d59f7f36b0a20c6ca33b7192f2c85 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 248 3.9E-55 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LK04_RS08835 f91d59f7f36b0a20c6ca33b7192f2c85 495 Gene3D G3DSA:3.30.420.40 251 484 4.9E-36 T 22-04-2016 LK04_RS08835 f91d59f7f36b0a20c6ca33b7192f2c85 495 PANTHER PTHR10196 5 494 3.8E-98 T 22-04-2016 LK04_RS08835 f91d59f7f36b0a20c6ca33b7192f2c85 495 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS08835 f91d59f7f36b0a20c6ca33b7192f2c85 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 441 2.8E-21 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LK04_RS08835 f91d59f7f36b0a20c6ca33b7192f2c85 495 Gene3D G3DSA:3.30.420.40 3 248 2.4E-50 T 22-04-2016 LK04_RS08835 f91d59f7f36b0a20c6ca33b7192f2c85 495 SUPERFAMILY SSF53067 250 491 4.05E-44 T 22-04-2016 LK04_RS08835 f91d59f7f36b0a20c6ca33b7192f2c85 495 SUPERFAMILY SSF53067 4 251 5.77E-53 T 22-04-2016 LK04_RS17240 8354760ba0e4be7ca32bd75a9ca5fac0 418 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 324 400 3.3E-7 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LK04_RS17240 8354760ba0e4be7ca32bd75a9ca5fac0 418 Pfam PF01943 Polysaccharide biosynthesis protein 8 253 9.6E-7 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 PANTHER PTHR10799:SF750 419 546 1.3E-22 T 22-04-2016 LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 PANTHER PTHR10799:SF750 22 38 1.3E-22 T 22-04-2016 LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 PANTHER PTHR10799:SF750 222 401 1.3E-22 T 22-04-2016 LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 SUPERFAMILY SSF103190 151 258 1.65E-5 T 22-04-2016 IPR029151 Periplasmic sensor domain-like LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 SMART SM00267 375 549 1.3E-59 T 22-04-2016 IPR000160 GGDEF domain LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 Gene3D G3DSA:3.30.450.20 166 248 5.1E-5 T 22-04-2016 LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 382 547 8.8E-50 T 22-04-2016 IPR000160 GGDEF domain LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 Pfam PF00990 Diguanylate cyclase, GGDEF domain 386 545 3.6E-46 T 22-04-2016 IPR000160 GGDEF domain LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 PANTHER PTHR10799 419 546 1.3E-22 T 22-04-2016 LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 PANTHER PTHR10799 22 38 1.3E-22 T 22-04-2016 LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 PANTHER PTHR10799 222 401 1.3E-22 T 22-04-2016 LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 Pfam PF17151 Periplasmic sensor domain 32 217 1.4E-63 T 22-04-2016 IPR033416 Periplasmic sensor domain CHASE7 UniPathway: UPA00694 LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 SUPERFAMILY SSF55073 391 547 1.18E-43 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS06860 fbed0057b75e2655808bed8fc2a3e716 550 Gene3D G3DSA:3.30.70.270 388 547 2.0E-50 T 22-04-2016 LK04_RS10780 849d1490b6c57534adde97c93b0a0b6f 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 230 1.3E-22 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LK04_RS10780 849d1490b6c57534adde97c93b0a0b6f 255 PANTHER PTHR11941 1 234 6.7E-46 T 22-04-2016 LK04_RS10780 849d1490b6c57534adde97c93b0a0b6f 255 SUPERFAMILY SSF52096 14 236 2.88E-38 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS10780 849d1490b6c57534adde97c93b0a0b6f 255 Gene3D G3DSA:3.90.226.10 6 245 1.1E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS10780 849d1490b6c57534adde97c93b0a0b6f 255 PANTHER PTHR11941:SF13 1 234 6.7E-46 T 22-04-2016 LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 SUPERFAMILY SSF53383 929 951 1.35E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 SUPERFAMILY SSF53383 477 889 1.35E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 PANTHER PTHR11773:SF1 1 956 0.0 T 22-04-2016 LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 Pfam PF02347 Glycine cleavage system P-protein 463 739 1.1E-8 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 Pfam PF02347 Glycine cleavage system P-protein 16 440 1.1E-181 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 SUPERFAMILY SSF53383 17 440 2.15E-94 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 Gene3D G3DSA:3.40.640.10 92 305 5.4E-13 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 Gene3D G3DSA:3.40.640.10 504 745 4.0E-41 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 PANTHER PTHR11773 1 956 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 LK04_RS02980 2ac42a42910b2ff8928db98834f3f593 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.498 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 LK04_RS01985 d25aba43173f3ae4f33ce5267949b1e8 211 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 2.6E-68 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 LK04_RS01985 d25aba43173f3ae4f33ce5267949b1e8 211 SUPERFAMILY SSF55811 11 208 6.77E-49 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS01985 d25aba43173f3ae4f33ce5267949b1e8 211 PANTHER PTHR11839 1 209 8.5E-119 T 22-04-2016 LK04_RS01985 d25aba43173f3ae4f33ce5267949b1e8 211 Gene3D G3DSA:3.90.79.10 15 202 9.3E-55 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS01985 d25aba43173f3ae4f33ce5267949b1e8 211 Pfam PF00293 NUDIX domain 59 176 3.0E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS01985 d25aba43173f3ae4f33ce5267949b1e8 211 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LK04_RS01985 d25aba43173f3ae4f33ce5267949b1e8 211 PANTHER PTHR11839:SF5 1 209 8.5E-119 T 22-04-2016 LK04_RS07450 07ed5e33e96ba6ba0cfbb5ae82107130 411 SUPERFAMILY SSF103473 10 405 1.31E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS07450 07ed5e33e96ba6ba0cfbb5ae82107130 411 Pfam PF07690 Major Facilitator Superfamily 25 356 8.8E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS07450 07ed5e33e96ba6ba0cfbb5ae82107130 411 Gene3D G3DSA:1.20.1250.20 215 405 6.8E-8 T 22-04-2016 LK04_RS07450 07ed5e33e96ba6ba0cfbb5ae82107130 411 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 87 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS07450 07ed5e33e96ba6ba0cfbb5ae82107130 411 PANTHER PTHR23502:SF43 13 403 1.2E-154 T 22-04-2016 LK04_RS07450 07ed5e33e96ba6ba0cfbb5ae82107130 411 PANTHER PTHR23502 13 403 1.2E-154 T 22-04-2016 LK04_RS07450 07ed5e33e96ba6ba0cfbb5ae82107130 411 Gene3D G3DSA:1.20.1250.20 20 198 8.0E-28 T 22-04-2016 LK04_RS02510 20dd862a7e794d93e88c3cae37bb077a 623 Gene3D G3DSA:2.30.40.10 3 83 1.2E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS02510 20dd862a7e794d93e88c3cae37bb077a 623 Pfam PF07969 Amidohydrolase family 52 536 7.0E-122 T 22-04-2016 IPR013108 Amidohydrolase 3 LK04_RS02510 20dd862a7e794d93e88c3cae37bb077a 623 Gene3D G3DSA:3.20.20.140 205 474 7.3E-20 T 22-04-2016 LK04_RS02510 20dd862a7e794d93e88c3cae37bb077a 623 PANTHER PTHR22642:SF2 2 554 4.0E-164 T 22-04-2016 LK04_RS02510 20dd862a7e794d93e88c3cae37bb077a 623 PANTHER PTHR22642 2 554 4.0E-164 T 22-04-2016 LK04_RS02510 20dd862a7e794d93e88c3cae37bb077a 623 SUPERFAMILY SSF51338 4 64 9.22E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS02510 20dd862a7e794d93e88c3cae37bb077a 623 SUPERFAMILY SSF51338 495 543 9.22E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS02510 20dd862a7e794d93e88c3cae37bb077a 623 Gene3D G3DSA:2.30.40.10 475 539 8.4E-4 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS02510 20dd862a7e794d93e88c3cae37bb077a 623 SUPERFAMILY SSF51556 63 125 9.65E-46 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS02510 20dd862a7e794d93e88c3cae37bb077a 623 SUPERFAMILY SSF51556 205 495 9.65E-46 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 5.1E-130 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 Pfam PF00294 pfkB family carbohydrate kinase 12 302 8.4E-55 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.9E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 SUPERFAMILY SSF53613 12 309 3.74E-60 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 Gene3D G3DSA:3.40.1190.20 13 312 1.1E-68 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 SUPERFAMILY SSF52374 340 471 9.01E-22 T 22-04-2016 LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 PANTHER PTHR10584:SF159 1 340 3.4E-153 T 22-04-2016 LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 Pfam PF01467 Cytidylyltransferase-like 345 469 3.9E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 Gene3D G3DSA:3.40.50.620 340 461 1.3E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 1.6E-64 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.331 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 LK04_RS01950 eb196cc839350c071b37c1d2fce44fd7 474 PANTHER PTHR10584 1 340 3.4E-153 T 22-04-2016 LK04_RS10785 ac3f8cf419df862897fc181b155b6e40 378 SUPERFAMILY SSF51395 1 370 5.96E-113 T 22-04-2016 LK04_RS10785 ac3f8cf419df862897fc181b155b6e40 378 PANTHER PTHR22893 1 378 1.0E-165 T 22-04-2016 LK04_RS10785 ac3f8cf419df862897fc181b155b6e40 378 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 346 1.3E-85 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LK04_RS10785 ac3f8cf419df862897fc181b155b6e40 378 Gene3D G3DSA:3.20.20.70 1 369 2.2E-124 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS10785 ac3f8cf419df862897fc181b155b6e40 378 PANTHER PTHR22893:SF14 1 378 1.0E-165 T 22-04-2016 LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 Gene3D G3DSA:2.60.40.1250 28 146 1.5E-44 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 Pfam PF11412 Disulphide bond corrector protein DsbC 32 142 2.2E-33 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 SUPERFAMILY SSF74863 30 144 9.15E-40 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 6 565 38.81 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 PANTHER PTHR32234 1 566 5.9E-219 T 22-04-2016 LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 PANTHER PTHR32234:SF0 1 566 5.9E-219 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 Pfam PF13098 Thioredoxin-like domain 466 561 4.7E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 173 378 5.3E-19 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 Gene3D G3DSA:3.40.30.10 455 563 2.0E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 ProSitePatterns PS00194 Thioredoxin family active site. 473 491 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LK04_RS16770 0af79891ae30e6b442603fdee288a07b 566 SUPERFAMILY SSF52833 451 562 4.92E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS04675 f4620ba790e941fbfbdb770b247221ca 252 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 229 1.1E-41 T 22-04-2016 LK04_RS04675 f4620ba790e941fbfbdb770b247221ca 252 PANTHER PTHR37468 2 249 1.2E-99 T 22-04-2016 LK04_RS04675 f4620ba790e941fbfbdb770b247221ca 252 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 28.674 T 22-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 LK04_RS15450 1fbeed0ad4e0a90bcff253852947cfa2 152 PANTHER PTHR34701 2 151 1.0E-64 T 22-04-2016 LK04_RS15450 1fbeed0ad4e0a90bcff253852947cfa2 152 SUPERFAMILY SSF89447 1 138 1.99E-45 T 22-04-2016 LK04_RS15450 1fbeed0ad4e0a90bcff253852947cfa2 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 56.844 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LK04_RS15450 1fbeed0ad4e0a90bcff253852947cfa2 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 2.5E-61 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LK04_RS15450 1fbeed0ad4e0a90bcff253852947cfa2 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 9.0E-73 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LK04_RS15450 1fbeed0ad4e0a90bcff253852947cfa2 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 141 1.3E-20 T 22-04-2016 IPR020603 MraZ domain LK04_RS15450 1fbeed0ad4e0a90bcff253852947cfa2 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 4.5E-21 T 22-04-2016 IPR020603 MraZ domain LK04_RS17275 c4dd268aeb76440d99f644445a6e7713 354 Gene3D G3DSA:3.40.50.720 181 293 2.5E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS17275 c4dd268aeb76440d99f644445a6e7713 354 Gene3D G3DSA:3.90.180.10 4 180 7.5E-63 T 22-04-2016 IPR011032 GroES-like LK04_RS17275 c4dd268aeb76440d99f644445a6e7713 354 SUPERFAMILY SSF50129 7 173 6.09E-50 T 22-04-2016 IPR011032 GroES-like LK04_RS17275 c4dd268aeb76440d99f644445a6e7713 354 SMART SM00829 9 343 4.2E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS17275 c4dd268aeb76440d99f644445a6e7713 354 PANTHER PTHR11695 16 354 5.4E-169 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS17275 c4dd268aeb76440d99f644445a6e7713 354 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 207 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LK04_RS17275 c4dd268aeb76440d99f644445a6e7713 354 Pfam PF00107 Zinc-binding dehydrogenase 186 308 7.5E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS17275 c4dd268aeb76440d99f644445a6e7713 354 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 144 2.7E-26 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS17275 c4dd268aeb76440d99f644445a6e7713 354 SUPERFAMILY SSF51735 149 313 5.97E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS17275 c4dd268aeb76440d99f644445a6e7713 354 PANTHER PTHR11695:SF582 16 354 5.4E-169 T 22-04-2016 LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 7.1E-40 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 319 2.8E-32 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 PANTHER PTHR18968:SF12 1 573 0.0 T 22-04-2016 LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 Gene3D G3DSA:3.40.50.970 353 551 1.4E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 1.6E-41 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 SUPERFAMILY SSF52467 182 350 7.64E-44 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 SUPERFAMILY SSF52518 358 559 5.16E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 Gene3D G3DSA:3.40.50.1220 185 338 2.6E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 Gene3D G3DSA:3.40.50.970 1 174 1.5E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 SUPERFAMILY SSF52518 2 178 3.32E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS12195 af12dca38192a32b9d86a11897ecd8fd 573 PANTHER PTHR18968 1 573 0.0 T 22-04-2016 LK04_RS13955 0efcbc422cac9edd1032c9d955499bd6 107 PANTHER PTHR21180 37 105 2.1E-26 T 22-04-2016 LK04_RS13955 0efcbc422cac9edd1032c9d955499bd6 107 SMART SM00278 55 74 100.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LK04_RS13955 0efcbc422cac9edd1032c9d955499bd6 107 SMART SM00278 85 104 9.5 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LK04_RS13955 0efcbc422cac9edd1032c9d955499bd6 107 SUPERFAMILY SSF47781 33 103 3.78E-24 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LK04_RS13955 0efcbc422cac9edd1032c9d955499bd6 107 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 43 106 4.9E-28 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain LK04_RS13955 0efcbc422cac9edd1032c9d955499bd6 107 Gene3D G3DSA:1.10.150.280 35 105 2.8E-16 T 22-04-2016 LK04_RS13955 0efcbc422cac9edd1032c9d955499bd6 107 Pfam PF12836 Helix-hairpin-helix motif 43 105 2.7E-19 T 22-04-2016 LK04_RS13840 21ddf69b75b414cff95c288b18cea208 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 294 4.4E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS13840 21ddf69b75b414cff95c288b18cea208 396 PANTHER PTHR30158:SF3 1 396 2.2E-197 T 22-04-2016 LK04_RS13840 21ddf69b75b414cff95c288b18cea208 396 Pfam PF00529 HlyD membrane-fusion protein of T1SS 65 362 6.0E-12 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS13840 21ddf69b75b414cff95c288b18cea208 396 PANTHER PTHR30158 1 396 2.2E-197 T 22-04-2016 LK04_RS13840 21ddf69b75b414cff95c288b18cea208 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 376 2.6E-84 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS13840 21ddf69b75b414cff95c288b18cea208 396 Gene3D G3DSA:2.40.50.100 66 99 1.1E-25 T 22-04-2016 LK04_RS13840 21ddf69b75b414cff95c288b18cea208 396 Gene3D G3DSA:2.40.50.100 174 209 1.1E-25 T 22-04-2016 LK04_RS13840 21ddf69b75b414cff95c288b18cea208 396 SUPERFAMILY SSF111369 53 301 4.84E-90 T 22-04-2016 LK04_RS13190 b23a306584daf4602dc7689f162964aa 179 SUPERFAMILY SSF47598 1 35 3.45E-14 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LK04_RS13190 b23a306584daf4602dc7689f162964aa 179 Gene3D G3DSA:1.10.1220.10 1 39 1.7E-27 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LK04_RS13190 b23a306584daf4602dc7689f162964aa 179 PIRSF PIRSF019401 1 179 4.2E-52 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 LK04_RS13190 b23a306584daf4602dc7689f162964aa 179 SUPERFAMILY SSF82808 64 179 3.66E-48 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 LK04_RS13190 b23a306584daf4602dc7689f162964aa 179 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 179 44.479 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 LK04_RS13190 b23a306584daf4602dc7689f162964aa 179 Gene3D G3DSA:1.20.1380.10 66 179 3.1E-53 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 LK04_RS13190 b23a306584daf4602dc7689f162964aa 179 Pfam PF03925 SeqA protein C-terminal domain 69 177 1.9E-48 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 LK04_RS01730 1f981d8a06b646e1253811df25cebddf 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 139 1.5E-28 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS01730 1f981d8a06b646e1253811df25cebddf 343 SUPERFAMILY SSF50129 8 176 1.0E-38 T 22-04-2016 IPR011032 GroES-like LK04_RS01730 1f981d8a06b646e1253811df25cebddf 343 Pfam PF00107 Zinc-binding dehydrogenase 180 304 4.6E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS01730 1f981d8a06b646e1253811df25cebddf 343 SUPERFAMILY SSF51735 146 300 1.83E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01730 1f981d8a06b646e1253811df25cebddf 343 Gene3D G3DSA:3.90.180.10 4 171 3.9E-39 T 22-04-2016 IPR011032 GroES-like LK04_RS01730 1f981d8a06b646e1253811df25cebddf 343 PANTHER PTHR11695 15 329 1.6E-160 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS01730 1f981d8a06b646e1253811df25cebddf 343 PANTHER PTHR11695:SF523 15 329 1.6E-160 T 22-04-2016 LK04_RS01730 1f981d8a06b646e1253811df25cebddf 343 Gene3D G3DSA:3.40.50.720 172 290 3.5E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09415 c458ca86054fda18e9376c24d10bba63 543 Gene3D G3DSA:3.10.105.10 300 494 3.5E-32 T 22-04-2016 LK04_RS09415 c458ca86054fda18e9376c24d10bba63 543 Gene3D G3DSA:3.40.190.10 157 299 2.1E-35 T 22-04-2016 LK04_RS09415 c458ca86054fda18e9376c24d10bba63 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 444 1.8E-74 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS09415 c458ca86054fda18e9376c24d10bba63 543 SUPERFAMILY SSF53850 26 534 5.25E-103 T 22-04-2016 LK04_RS09415 c458ca86054fda18e9376c24d10bba63 543 PIRSF PIRSF002741 21 538 2.1E-69 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS09415 c458ca86054fda18e9376c24d10bba63 543 PANTHER PTHR30290 20 542 3.1E-93 T 22-04-2016 LK04_RS09415 c458ca86054fda18e9376c24d10bba63 543 Gene3D G3DSA:3.90.76.10 63 156 4.9E-24 T 22-04-2016 LK04_RS06325 d71e6acb8963fc0bbf4e2564e96d3890 154 Pfam PF06445 GyrI-like small molecule binding domain 1 151 1.8E-20 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain LK04_RS06325 d71e6acb8963fc0bbf4e2564e96d3890 154 SMART SM00871 1 151 1.1E-19 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding LK04_RS06325 d71e6acb8963fc0bbf4e2564e96d3890 154 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 153 33.393 T 22-04-2016 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 LK04_RS06325 d71e6acb8963fc0bbf4e2564e96d3890 154 PANTHER PTHR40055 15 151 2.8E-29 T 22-04-2016 LK04_RS06325 d71e6acb8963fc0bbf4e2564e96d3890 154 SUPERFAMILY SSF55136 1 151 3.27E-29 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain LK04_RS06325 d71e6acb8963fc0bbf4e2564e96d3890 154 Gene3D G3DSA:3.20.80.10 1 151 3.0E-34 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain LK04_RS06325 d71e6acb8963fc0bbf4e2564e96d3890 154 PANTHER PTHR40055:SF2 15 151 2.8E-29 T 22-04-2016 LK04_RS02255 ec87753afeff3413878c16443ac813d7 258 Pfam PF01026 TatD related DNase 4 254 2.4E-67 T 22-04-2016 IPR001130 TatD family GO:0016788 LK04_RS02255 ec87753afeff3413878c16443ac813d7 258 Gene3D G3DSA:3.20.20.140 1 255 1.0E-77 T 22-04-2016 LK04_RS02255 ec87753afeff3413878c16443ac813d7 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LK04_RS02255 ec87753afeff3413878c16443ac813d7 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LK04_RS02255 ec87753afeff3413878c16443ac813d7 258 SUPERFAMILY SSF51556 3 256 4.54E-76 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS02255 ec87753afeff3413878c16443ac813d7 258 PANTHER PTHR10060 1 258 4.3E-85 T 22-04-2016 IPR001130 TatD family GO:0016788 LK04_RS02255 ec87753afeff3413878c16443ac813d7 258 PIRSF PIRSF005902 1 258 1.2E-68 T 22-04-2016 IPR001130 TatD family GO:0016788 LK04_RS02255 ec87753afeff3413878c16443ac813d7 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LK04_RS15865 4c59120eea96539f2d77cdafe25faa49 177 PANTHER PTHR33795:SF1 3 176 2.3E-34 T 22-04-2016 LK04_RS15865 4c59120eea96539f2d77cdafe25faa49 177 SUPERFAMILY SSF48295 4 61 1.46E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 LK04_RS15865 4c59120eea96539f2d77cdafe25faa49 177 SUPERFAMILY SSF46689 63 164 4.48E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS15865 4c59120eea96539f2d77cdafe25faa49 177 PANTHER PTHR33795 3 176 2.3E-34 T 22-04-2016 LK04_RS15865 4c59120eea96539f2d77cdafe25faa49 177 Gene3D G3DSA:1.10.10.60 65 159 7.6E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS15865 4c59120eea96539f2d77cdafe25faa49 177 Pfam PF13518 Helix-turn-helix domain 9 59 1.7E-12 T 22-04-2016 LK04_RS15865 4c59120eea96539f2d77cdafe25faa49 177 Pfam PF13518 Helix-turn-helix domain 68 110 2.8E-6 T 22-04-2016 LK04_RS15865 4c59120eea96539f2d77cdafe25faa49 177 Gene3D G3DSA:1.10.10.10 4 57 2.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 SUPERFAMILY SSF55874 1 201 4.32E-56 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 PANTHER PTHR10073 3 332 3.7E-157 T 22-04-2016 LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 SUPERFAMILY SSF118116 434 613 2.62E-41 T 22-04-2016 LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 SMART SM01340 212 330 1.3E-55 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 Gene3D G3DSA:3.30.565.10 2 204 4.0E-77 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 SMART SM00853 438 573 2.8E-15 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 Gene3D G3DSA:3.30.230.10 218 329 2.0E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 329 1.3E-38 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 SUPERFAMILY SSF54211 190 330 7.97E-37 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 612 25.995 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 Pfam PF08676 MutL C terminal dimerisation domain 435 565 3.9E-27 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.8E-104 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 LK04_RS01330 b5823ad4561597369319507b00a2ac47 615 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 1.8E-12 T 22-04-2016 LK04_RS05230 9bd19cee3a2bd7f3f122b0f068392466 255 Pfam PF04333 MlaA lipoprotein 33 226 4.8E-66 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LK04_RS05230 9bd19cee3a2bd7f3f122b0f068392466 255 PANTHER PTHR30035:SF3 1 254 3.5E-115 T 22-04-2016 LK04_RS05230 9bd19cee3a2bd7f3f122b0f068392466 255 PANTHER PTHR30035 1 254 3.5E-115 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LK04_RS05230 9bd19cee3a2bd7f3f122b0f068392466 255 PRINTS PR01805 VacJ lipoprotein signature 142 159 6.2E-34 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LK04_RS05230 9bd19cee3a2bd7f3f122b0f068392466 255 PRINTS PR01805 VacJ lipoprotein signature 34 47 6.2E-34 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LK04_RS05230 9bd19cee3a2bd7f3f122b0f068392466 255 PRINTS PR01805 VacJ lipoprotein signature 103 120 6.2E-34 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LK04_RS05230 9bd19cee3a2bd7f3f122b0f068392466 255 PRINTS PR01805 VacJ lipoprotein signature 52 68 6.2E-34 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LK04_RS12860 27ff58ad39040eee93bbf31ea61beaa1 300 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 11 260 9.5E-97 T 22-04-2016 IPR010119 Gluconeogenesis factor LK04_RS12860 27ff58ad39040eee93bbf31ea61beaa1 300 PANTHER PTHR30135 1 299 2.8E-108 T 22-04-2016 LK04_RS12860 27ff58ad39040eee93bbf31ea61beaa1 300 Pfam PF01933 Uncharacterised protein family UPF0052 11 286 6.8E-75 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 LK04_RS12860 27ff58ad39040eee93bbf31ea61beaa1 300 Gene3D G3DSA:3.40.50.10680 81 298 1.3E-51 T 22-04-2016 LK04_RS12860 27ff58ad39040eee93bbf31ea61beaa1 300 Hamap MF_00973 Gluconeogenesis factor. 7 299 31.531 T 22-04-2016 IPR010119 Gluconeogenesis factor LK04_RS12860 27ff58ad39040eee93bbf31ea61beaa1 300 SUPERFAMILY SSF142338 10 293 3.14E-81 T 22-04-2016 LK04_RS05410 57c0e60f0b6c3e6b2714201d69007d61 257 SUPERFAMILY SSF52540 6 251 5.44E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05410 57c0e60f0b6c3e6b2714201d69007d61 257 Gene3D G3DSA:3.40.50.300 5 252 3.5E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05410 57c0e60f0b6c3e6b2714201d69007d61 257 SMART SM00382 30 229 4.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS05410 57c0e60f0b6c3e6b2714201d69007d61 257 PANTHER PTHR24220:SF347 7 257 3.0E-183 T 22-04-2016 LK04_RS05410 57c0e60f0b6c3e6b2714201d69007d61 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS05410 57c0e60f0b6c3e6b2714201d69007d61 257 PIRSF PIRSF039085 2 257 8.8E-121 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS05410 57c0e60f0b6c3e6b2714201d69007d61 257 PANTHER PTHR24220 7 257 3.0E-183 T 22-04-2016 LK04_RS05410 57c0e60f0b6c3e6b2714201d69007d61 257 Pfam PF00005 ABC transporter 21 181 6.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS00165 27b5cb55b57e28537325f1ad1953930b 304 PANTHER PTHR30036 6 303 4.9E-41 T 22-04-2016 LK04_RS00165 27b5cb55b57e28537325f1ad1953930b 304 SUPERFAMILY SSF53822 23 301 6.24E-76 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS00165 27b5cb55b57e28537325f1ad1953930b 304 Pfam PF13407 Periplasmic binding protein domain 24 279 3.6E-50 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS00165 27b5cb55b57e28537325f1ad1953930b 304 Gene3D G3DSA:3.40.50.2300 138 300 1.8E-46 T 22-04-2016 LK04_RS00165 27b5cb55b57e28537325f1ad1953930b 304 Gene3D G3DSA:3.40.50.2300 23 137 4.8E-28 T 22-04-2016 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 PIRSF PIRSF001365 11 303 3.4E-63 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 PANTHER PTHR12128 1 303 2.8E-65 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 SMART SM01130 15 302 2.6E-71 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 Pfam PF00701 Dihydrodipicolinate synthetase family 16 297 3.2E-51 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 49 70 4.2E-12 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 143 160 4.2E-12 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 85 103 4.2E-12 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 118 134 4.2E-12 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 Gene3D G3DSA:3.20.20.70 12 301 3.7E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 52 69 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS06365 96f0c7eef23027d4ebb6540a46b45916 303 SUPERFAMILY SSF51569 15 300 1.05E-68 T 22-04-2016 LK04_RS19460 3ee4adcc77157ae3cc187b3669e96060 347 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 342 1.2E-160 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 LK04_RS19460 3ee4adcc77157ae3cc187b3669e96060 347 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 323 1.3E-82 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 LK04_RS19460 3ee4adcc77157ae3cc187b3669e96060 347 SUPERFAMILY SSF53756 1 343 1.26E-95 T 22-04-2016 LK04_RS19460 3ee4adcc77157ae3cc187b3669e96060 347 Gene3D G3DSA:3.40.50.2000 163 343 5.3E-54 T 22-04-2016 LK04_RS19460 3ee4adcc77157ae3cc187b3669e96060 347 PANTHER PTHR30160 1 343 2.7E-107 T 22-04-2016 LK04_RS19460 3ee4adcc77157ae3cc187b3669e96060 347 PANTHER PTHR30160:SF7 1 343 2.7E-107 T 22-04-2016 LK04_RS19460 3ee4adcc77157ae3cc187b3669e96060 347 Gene3D G3DSA:3.40.50.2000 1 140 1.8E-55 T 22-04-2016 LK04_RS12165 25ddc8d907d8c6cdf9a50a3e27ba432a 72 PANTHER PTHR33370 1 72 1.5E-49 T 22-04-2016 LK04_RS12165 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 LK04_RS12165 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.8E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 LK04_RS12165 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 71 2.9E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12165 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 LK04_RS12165 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12165 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS06195 900bb9a9e5c1e6e723f682f5c38535d2 203 SUPERFAMILY SSF101386 114 202 4.8E-24 T 22-04-2016 LK04_RS06195 900bb9a9e5c1e6e723f682f5c38535d2 203 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.13 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 LK04_RS06195 900bb9a9e5c1e6e723f682f5c38535d2 203 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 2.0E-22 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 LK04_RS06195 900bb9a9e5c1e6e723f682f5c38535d2 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 201 6.3E-17 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 LK04_RS06195 900bb9a9e5c1e6e723f682f5c38535d2 203 PANTHER PTHR21256:SF16 5 203 3.3E-112 T 22-04-2016 LK04_RS06195 900bb9a9e5c1e6e723f682f5c38535d2 203 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 198 1.6E-30 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 LK04_RS06195 900bb9a9e5c1e6e723f682f5c38535d2 203 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.413 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 LK04_RS06195 900bb9a9e5c1e6e723f682f5c38535d2 203 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 6.1E-31 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 LK04_RS06195 900bb9a9e5c1e6e723f682f5c38535d2 203 PANTHER PTHR21256 5 203 3.3E-112 T 22-04-2016 LK04_RS06195 900bb9a9e5c1e6e723f682f5c38535d2 203 SUPERFAMILY SSF141734 6 122 8.63E-45 T 22-04-2016 LK04_RS11730 84d46da23ac5bf3cf9ff4cf4bad4526b 363 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 1 354 2.5E-216 T 22-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 LK04_RS11730 84d46da23ac5bf3cf9ff4cf4bad4526b 363 SUPERFAMILY SSF51679 1 352 9.27E-79 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS11730 84d46da23ac5bf3cf9ff4cf4bad4526b 363 PANTHER PTHR30011 1 361 9.9E-149 T 22-04-2016 LK04_RS11730 84d46da23ac5bf3cf9ff4cf4bad4526b 363 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 1 360 69.298 T 22-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 LK04_RS11730 84d46da23ac5bf3cf9ff4cf4bad4526b 363 Gene3D G3DSA:3.20.20.30 1 352 6.0E-87 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS11730 84d46da23ac5bf3cf9ff4cf4bad4526b 363 PANTHER PTHR30011:SF1 1 361 9.9E-149 T 22-04-2016 LK04_RS11730 84d46da23ac5bf3cf9ff4cf4bad4526b 363 Pfam PF00296 Luciferase-like monooxygenase 1 318 1.9E-69 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS02855 bf1351c8fc917f581e4c76c609794e20 306 PANTHER PTHR11358 1 298 6.8E-99 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LK04_RS02855 bf1351c8fc917f581e4c76c609794e20 306 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 LK04_RS02855 bf1351c8fc917f581e4c76c609794e20 306 SUPERFAMILY SSF52768 14 302 7.38E-89 T 22-04-2016 LK04_RS02855 bf1351c8fc917f581e4c76c609794e20 306 Gene3D G3DSA:3.40.800.10 12 303 4.5E-93 T 22-04-2016 IPR023696 Ureohydrolase domain LK04_RS02855 bf1351c8fc917f581e4c76c609794e20 306 PANTHER PTHR11358:SF26 1 298 6.8E-99 T 22-04-2016 LK04_RS02855 bf1351c8fc917f581e4c76c609794e20 306 Pfam PF00491 Arginase family 35 297 2.0E-82 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LK04_RS02855 bf1351c8fc917f581e4c76c609794e20 306 PIRSF PIRSF036979 15 305 5.3E-94 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LK04_RS02855 bf1351c8fc917f581e4c76c609794e20 306 TIGRFAM TIGR01230 agmatinase: agmatinase 24 299 6.0E-101 T 22-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 LK04_RS02855 bf1351c8fc917f581e4c76c609794e20 306 Hamap MF_01418 Agmatinase [speB]. 2 305 65.268 T 22-04-2016 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 LK04_RS04010 4c91bbd9827efa2842d38d0c5888491d 318 Pfam PF03888 MucB/RseB N-terminal domain 29 210 5.5E-60 T 22-04-2016 IPR033434 MucB/RseB, N-terminal LK04_RS04010 4c91bbd9827efa2842d38d0c5888491d 318 Pfam PF17188 MucB/RseB C-terminal domain 219 312 1.6E-28 T 22-04-2016 IPR033436 MucB/RseB, C-terminal LK04_RS04010 4c91bbd9827efa2842d38d0c5888491d 318 Gene3D G3DSA:2.50.20.10 125 186 1.0E-5 T 22-04-2016 LK04_RS04010 4c91bbd9827efa2842d38d0c5888491d 318 PANTHER PTHR38782:SF1 2 318 4.5E-122 T 22-04-2016 LK04_RS04010 4c91bbd9827efa2842d38d0c5888491d 318 PIRSF PIRSF005427 1 318 1.5E-86 T 22-04-2016 IPR005588 MucB/RseB LK04_RS04010 4c91bbd9827efa2842d38d0c5888491d 318 PANTHER PTHR38782 2 318 4.5E-122 T 22-04-2016 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 PANTHER PTHR11552:SF139 4 589 5.9E-168 T 22-04-2016 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 Pfam PF05199 GMC oxidoreductase 449 573 3.7E-21 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 PANTHER PTHR11552 4 589 5.9E-168 T 22-04-2016 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 Pfam PF00732 GMC oxidoreductase 188 349 1.7E-10 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 SUPERFAMILY SSF54373 424 498 1.26E-9 T 22-04-2016 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 SUPERFAMILY SSF51905 524 585 2.14E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 SUPERFAMILY SSF51905 7 344 2.14E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 Gene3D G3DSA:3.50.50.60 246 352 7.4E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 Gene3D G3DSA:3.50.50.60 7 158 7.4E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 Gene3D G3DSA:3.50.50.60 457 470 7.4E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS17095 bfc1e11462f78f5e63846f215dbe72a9 594 Gene3D G3DSA:3.50.50.60 515 583 7.4E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02720 902c4d53de5ae201a387671567aae43f 330 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 194 208 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LK04_RS02720 902c4d53de5ae201a387671567aae43f 330 SMART SM00382 123 248 0.0023 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS02720 902c4d53de5ae201a387671567aae43f 330 SUPERFAMILY SSF52540 3 328 7.71E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02720 902c4d53de5ae201a387671567aae43f 330 Pfam PF00437 Type II/IV secretion system protein 40 270 8.7E-43 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LK04_RS02720 902c4d53de5ae201a387671567aae43f 330 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 330 3.1E-132 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 LK04_RS02720 902c4d53de5ae201a387671567aae43f 330 PANTHER PTHR30486:SF6 1 330 2.0E-152 T 22-04-2016 LK04_RS02720 902c4d53de5ae201a387671567aae43f 330 PANTHER PTHR30486 1 330 2.0E-152 T 22-04-2016 LK04_RS02720 902c4d53de5ae201a387671567aae43f 330 Gene3D G3DSA:3.40.50.300 105 322 2.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 Gene3D G3DSA:3.30.450.20 309 427 1.0E-16 T 22-04-2016 LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 437 596 6.0E-37 T 22-04-2016 IPR000160 GGDEF domain LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 SMART SM00091 317 383 1.2E-6 T 22-04-2016 IPR000014 PAS domain LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 PANTHER PTHR33121 549 858 6.3E-76 T 22-04-2016 LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 SMART SM00267 429 599 1.0E-49 T 22-04-2016 IPR000160 GGDEF domain LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 314 435 4.3E-14 T 22-04-2016 IPR000014 PAS domain LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 Gene3D G3DSA:3.30.70.270 441 607 2.0E-49 T 22-04-2016 LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 Pfam PF00563 EAL domain 615 846 1.0E-66 T 22-04-2016 IPR001633 EAL domain LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 Pfam PF00990 Diguanylate cyclase, GGDEF domain 441 594 9.9E-43 T 22-04-2016 IPR000160 GGDEF domain LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 SUPERFAMILY SSF141868 615 858 5.1E-82 T 22-04-2016 IPR001633 EAL domain LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 SUPERFAMILY SSF55785 308 427 3.43E-16 T 22-04-2016 IPR000014 PAS domain LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 Gene3D G3DSA:3.20.20.450 613 858 8.4E-88 T 22-04-2016 IPR001633 EAL domain LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 Pfam PF00989 PAS fold 317 426 2.1E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 SUPERFAMILY SSF55073 445 600 5.96E-42 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 Pfam PF05228 CHASE4 domain 71 221 2.4E-15 T 22-04-2016 IPR007892 CHASE4 LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 PANTHER PTHR33121:SF13 549 858 6.3E-76 T 22-04-2016 LK04_RS14340 48ef2ead0aea47fdd8c8b46f990e1eeb 864 SMART SM00052 609 851 2.2E-94 T 22-04-2016 IPR001633 EAL domain LK04_RS14835 f29893abf4a0246dd31a97f2a532373d 186 SUPERFAMILY SSF56784 3 184 2.8E-54 T 22-04-2016 IPR023214 HAD-like domain LK04_RS14835 f29893abf4a0246dd31a97f2a532373d 186 PANTHER PTHR23133:SF3 6 185 1.5E-71 T 22-04-2016 LK04_RS14835 f29893abf4a0246dd31a97f2a532373d 186 PIRSF PIRSF004682 1 186 6.8E-67 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 LK04_RS14835 f29893abf4a0246dd31a97f2a532373d 186 Pfam PF13242 HAD-hyrolase-like 109 179 2.7E-13 T 22-04-2016 LK04_RS14835 f29893abf4a0246dd31a97f2a532373d 186 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 155 2.0E-40 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 LK04_RS14835 f29893abf4a0246dd31a97f2a532373d 186 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 180 6.2E-92 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 LK04_RS14835 f29893abf4a0246dd31a97f2a532373d 186 Gene3D G3DSA:3.40.50.1000 3 181 5.6E-64 T 22-04-2016 IPR023214 HAD-like domain LK04_RS14835 f29893abf4a0246dd31a97f2a532373d 186 PANTHER PTHR23133 6 185 1.5E-71 T 22-04-2016 LK04_RS14835 f29893abf4a0246dd31a97f2a532373d 186 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 156 5.4E-41 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LK04_RS18405 dd13b1153e8f9ba759a30c7e2e61d1e1 253 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS18405 dd13b1153e8f9ba759a30c7e2e61d1e1 253 Pfam PF00005 ABC transporter 19 168 4.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS18405 dd13b1153e8f9ba759a30c7e2e61d1e1 253 SUPERFAMILY SSF52540 3 216 3.99E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18405 dd13b1153e8f9ba759a30c7e2e61d1e1 253 PANTHER PTHR24220 5 216 9.7E-87 T 22-04-2016 LK04_RS18405 dd13b1153e8f9ba759a30c7e2e61d1e1 253 Gene3D G3DSA:3.40.50.300 2 216 3.9E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18405 dd13b1153e8f9ba759a30c7e2e61d1e1 253 SMART SM00382 28 218 2.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PANTHER PTHR24322 8 136 2.8E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PANTHER PTHR24322 152 184 2.8E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 SUPERFAMILY SSF51735 2 226 2.47E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PIRSF PIRSF000126 1 259 3.9E-68 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PANTHER PTHR24322:SF468 8 136 2.8E-45 T 22-04-2016 LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PANTHER PTHR24322:SF468 152 184 2.8E-45 T 22-04-2016 LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 Pfam PF00106 short chain dehydrogenase 5 193 1.3E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 Gene3D G3DSA:3.40.50.720 3 223 2.1E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS01875 091b652d4e4d888cd1a03cba422ceee9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11595 b6292274bff672cd5259c60d8eeb4251 442 Gene3D G3DSA:3.40.50.980 14 134 2.6E-10 T 22-04-2016 LK04_RS11595 b6292274bff672cd5259c60d8eeb4251 442 Pfam PF00501 AMP-binding enzyme 120 274 1.8E-9 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LK04_RS11595 b6292274bff672cd5259c60d8eeb4251 442 Gene3D G3DSA:3.30.300.30 338 431 2.7E-12 T 22-04-2016 LK04_RS11595 b6292274bff672cd5259c60d8eeb4251 442 Gene3D G3DSA:3.40.50.980 135 273 5.1E-12 T 22-04-2016 LK04_RS11595 b6292274bff672cd5259c60d8eeb4251 442 SUPERFAMILY SSF56801 21 437 4.19E-49 T 22-04-2016 LK04_RS11595 b6292274bff672cd5259c60d8eeb4251 442 ProSitePatterns PS00455 Putative AMP-binding domain signature. 128 139 - T 22-04-2016 IPR020845 AMP-binding, conserved site LK04_RS13415 09c21ab769a02850f2ddb983e8891615 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 2.6E-20 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 LK04_RS13415 09c21ab769a02850f2ddb983e8891615 67 PANTHER PTHR33162:SF2 1 56 1.9E-23 T 22-04-2016 LK04_RS13415 09c21ab769a02850f2ddb983e8891615 67 PANTHER PTHR33162 1 56 1.9E-23 T 22-04-2016 LK04_RS13415 09c21ab769a02850f2ddb983e8891615 67 Pfam PF02416 mttA/Hcf106 family 5 54 2.1E-13 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 LK04_RS13415 09c21ab769a02850f2ddb983e8891615 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 20.346 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 LK04_RS13415 09c21ab769a02850f2ddb983e8891615 67 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 67 25.88 T 22-04-2016 IPR024905 Sec-independent protein translocase protein TatE LK04_RS01890 50a5b247da44d43dde5cdf33ec8be1dd 259 Pfam PF13531 Bacterial extracellular solute-binding protein 30 256 4.2E-32 T 22-04-2016 LK04_RS01890 50a5b247da44d43dde5cdf33ec8be1dd 259 SUPERFAMILY SSF53850 29 258 4.12E-33 T 22-04-2016 LK04_RS01890 50a5b247da44d43dde5cdf33ec8be1dd 259 Gene3D G3DSA:3.40.190.10 12 153 1.8E-13 T 22-04-2016 LK04_RS01890 50a5b247da44d43dde5cdf33ec8be1dd 259 Gene3D G3DSA:3.40.190.10 234 257 1.8E-13 T 22-04-2016 LK04_RS01890 50a5b247da44d43dde5cdf33ec8be1dd 259 PANTHER PTHR30632 5 258 6.5E-37 T 22-04-2016 LK04_RS01890 50a5b247da44d43dde5cdf33ec8be1dd 259 PANTHER PTHR30632:SF5 5 258 6.5E-37 T 22-04-2016 LK04_RS01890 50a5b247da44d43dde5cdf33ec8be1dd 259 Gene3D G3DSA:3.40.190.10 178 233 9.5E-4 T 22-04-2016 LK04_RS05945 7b5d83e93053179a68ee64bab2f1ce33 427 Gene3D G3DSA:1.20.1250.20 225 419 1.8E-36 T 22-04-2016 LK04_RS05945 7b5d83e93053179a68ee64bab2f1ce33 427 Gene3D G3DSA:1.20.1250.20 5 198 1.1E-49 T 22-04-2016 LK04_RS05945 7b5d83e93053179a68ee64bab2f1ce33 427 SUPERFAMILY SSF103473 4 421 1.83E-85 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05945 7b5d83e93053179a68ee64bab2f1ce33 427 PANTHER PTHR11662 4 417 1.3E-180 T 22-04-2016 LK04_RS05945 7b5d83e93053179a68ee64bab2f1ce33 427 Pfam PF07690 Major Facilitator Superfamily 13 380 7.2E-58 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS05945 7b5d83e93053179a68ee64bab2f1ce33 427 PANTHER PTHR11662:SF257 4 417 1.3E-180 T 22-04-2016 LK04_RS05945 7b5d83e93053179a68ee64bab2f1ce33 427 PIRSF PIRSF002808 1 426 5.1E-42 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 PANTHER PTHR30537:SF28 1 288 1.3E-89 T 22-04-2016 LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 Pfam PF03466 LysR substrate binding domain 91 295 2.9E-36 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 Gene3D G3DSA:1.10.10.10 7 87 2.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 Gene3D G3DSA:3.40.190.10 96 179 4.0E-15 T 22-04-2016 LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 Gene3D G3DSA:3.40.190.10 180 263 3.5E-11 T 22-04-2016 LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 6.0E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 SUPERFAMILY SSF46785 5 113 3.97E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.2E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.2E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.2E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 PANTHER PTHR30537 1 288 1.3E-89 T 22-04-2016 LK04_RS14460 0e1206bc8c6735bdc1187451eb742775 297 SUPERFAMILY SSF53850 91 295 4.71E-38 T 22-04-2016 LK04_RS12760 a6754ed0944c2c4bac1250bfd905f819 358 Gene3D G3DSA:2.40.440.10 92 233 7.4E-34 T 22-04-2016 LK04_RS12760 a6754ed0944c2c4bac1250bfd905f819 358 PANTHER PTHR30582 5 312 1.2E-167 T 22-04-2016 LK04_RS12760 a6754ed0944c2c4bac1250bfd905f819 358 SUPERFAMILY SSF141523 177 233 7.59E-27 T 22-04-2016 LK04_RS12760 a6754ed0944c2c4bac1250bfd905f819 358 SUPERFAMILY SSF141523 94 149 7.59E-27 T 22-04-2016 LK04_RS12760 a6754ed0944c2c4bac1250bfd905f819 358 Pfam PF03734 L,D-transpeptidase catalytic domain 100 231 1.5E-16 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 LK04_RS12760 a6754ed0944c2c4bac1250bfd905f819 358 PANTHER PTHR30582:SF8 5 312 1.2E-167 T 22-04-2016 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PANTHER PTHR11686:SF8 1 532 1.9E-224 T 22-04-2016 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 226 242 6.1E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 43 68 6.1E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 255 274 6.1E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 404 419 6.1E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 373 391 6.1E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 446 6.1E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 128 147 6.1E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 349 367 6.1E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 110 128 6.1E-33 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 SUPERFAMILY SSF56235 12 531 5.79E-170 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 Pfam PF01019 Gamma-glutamyltranspeptidase 36 527 5.4E-148 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18450 7aba7bffaf1f4ed4f10607ebaf680132 532 PANTHER PTHR11686 1 532 1.9E-224 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 Pfam PF00005 ABC transporter 18 169 7.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 Pfam PF00005 ABC transporter 276 431 4.2E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 SUPERFAMILY SSF52540 255 484 1.38E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 Gene3D G3DSA:3.40.50.300 2 233 6.6E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 SMART SM00382 27 217 3.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 SMART SM00382 284 480 2.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 PANTHER PTHR24220:SF392 4 385 2.0E-203 T 22-04-2016 LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 Gene3D G3DSA:3.40.50.300 249 497 2.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 PANTHER PTHR24220 4 385 2.0E-203 T 22-04-2016 LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 2 500 3.3E-268 T 22-04-2016 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 LK04_RS18645 ba191a382ddbcd698935bf993530bfa5 506 SUPERFAMILY SSF52540 2 229 7.62E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 6.5E-227 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 PIRSF PIRSF000478 2 439 1.1E-154 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 Gene3D G3DSA:1.20.970.10 2 68 1.0E-28 T 22-04-2016 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 SMART SM00941 350 424 2.9E-28 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 PANTHER PTHR10515 5 440 1.6E-215 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 8.7E-167 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 Gene3D G3DSA:3.90.1170.30 339 433 7.7E-36 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.4E-23 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 SUPERFAMILY SSF52418 74 334 3.66E-89 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 SUPERFAMILY SSF47648 4 70 9.94E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 PANTHER PTHR10515:SF0 5 440 1.6E-215 T 22-04-2016 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 53.347 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 SUPERFAMILY SSF54680 341 438 7.46E-31 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 1.3E-51 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.2E-18 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LK04_RS02265 b6cc236d9c527e33625b017a96146562 440 Gene3D G3DSA:3.40.1030.10 75 336 2.3E-111 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 SUPERFAMILY SSF82282 7 399 6.41E-114 T 22-04-2016 IPR003726 Homocysteine-binding domain LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 Gene3D G3DSA:1.10.1240.10 650 737 2.1E-38 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 Gene3D G3DSA:3.20.20.20 364 636 4.8E-113 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 SUPERFAMILY SSF51717 356 630 1.06E-87 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 TIGRFAM TIGR02082 metH: methionine synthase 13 1192 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 1.2E-88 T 22-04-2016 IPR003726 Homocysteine-binding domain LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 PANTHER PTHR21091 8 398 4.2E-161 T 22-04-2016 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 Gene3D G3DSA:3.20.20.330 4 363 1.4E-122 T 22-04-2016 IPR003726 Homocysteine-binding domain LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 PIRSF PIRSF000381 1 1195 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 SUPERFAMILY SSF56507 903 1226 1.7E-133 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 Gene3D G3DSA:3.10.196.10 957 1226 7.4E-115 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 SUPERFAMILY SSF52242 744 894 3.14E-46 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 SMART SM01018 657 740 8.5E-43 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 Pfam PF02310 B12 binding domain 748 840 6.6E-19 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 9.2E-125 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 Pfam PF02607 B12 binding domain 660 733 3.4E-23 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 SUPERFAMILY SSF47644 653 739 4.05E-28 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 Pfam PF00809 Pterin binding enzyme 360 598 2.5E-62 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 Gene3D G3DSA:3.40.50.280 745 895 7.0E-66 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 LK04_RS17655 1b8b5cb8717976447b562aa1bf38e2df 1227 PANTHER PTHR21091:SF97 8 398 4.2E-161 T 22-04-2016 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 82 675 1.5E-156 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 1 693 0.0 T 22-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 SUPERFAMILY SSF48168 1 153 9.42E-55 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 PANTHER PTHR11573 7 681 7.4E-244 T 22-04-2016 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 79 150 3.5E-12 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 SUPERFAMILY SSF51998 154 677 5.49E-182 T 22-04-2016 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 Gene3D G3DSA:3.20.70.20 88 276 2.2E-54 T 22-04-2016 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 Gene3D G3DSA:3.20.70.20 329 492 2.2E-54 T 22-04-2016 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 Gene3D G3DSA:3.20.70.20 556 670 2.2E-54 T 22-04-2016 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 472 495 4.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 361 372 4.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 405 428 4.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 230 249 4.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 444 466 4.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 556 583 4.8E-32 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 Pfam PF02867 Ribonucleotide reductase, barrel domain 155 672 2.0E-138 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 545 567 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS03815 d09e2c37f0e9f358c3591788a6e1e952 693 Pfam PF08343 Ribonucleotide reductase N-terminal 1 76 3.0E-26 T 22-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 Pfam PF03466 LysR substrate binding domain 92 292 1.3E-40 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 PANTHER PTHR30126 1 309 3.5E-224 T 22-04-2016 LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 SUPERFAMILY SSF53850 91 322 1.8E-44 T 22-04-2016 LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 Gene3D G3DSA:3.40.190.10 92 184 4.1E-20 T 22-04-2016 LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 Gene3D G3DSA:3.40.190.10 185 261 4.7E-31 T 22-04-2016 LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 PANTHER PTHR30126:SF6 1 309 3.5E-224 T 22-04-2016 LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 Gene3D G3DSA:1.10.10.10 1 81 3.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08250 5807572e4b41e8d019eb32f978fe0b09 324 SUPERFAMILY SSF46785 1 85 1.56E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 PANTHER PTHR24319:SF32 7 230 6.0E-66 T 22-04-2016 LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.1E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.1E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.1E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.8E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.8E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.8E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.8E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.8E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 Gene3D G3DSA:3.40.50.720 7 222 3.8E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 PANTHER PTHR24319 7 230 6.0E-66 T 22-04-2016 LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 Pfam PF00106 short chain dehydrogenase 7 187 1.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16840 86454d5a350ad9b16ea246f351af7ef7 250 SUPERFAMILY SSF51735 6 226 8.33E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15715 9032165a367d9df19b40c8f81804d352 1079 PANTHER PTHR36153:SF1 121 1079 3.6E-127 T 22-04-2016 LK04_RS15715 9032165a367d9df19b40c8f81804d352 1079 PANTHER PTHR36153 121 1079 3.6E-127 T 22-04-2016 LK04_RS15715 9032165a367d9df19b40c8f81804d352 1079 Pfam PF06761 Intracellular multiplication and human macrophage-killing 403 706 3.5E-68 T 22-04-2016 IPR009612 ImcF-related LK04_RS15715 9032165a367d9df19b40c8f81804d352 1079 Pfam PF06744 Type VI secretion protein IcmF C-terminal 828 1025 8.9E-54 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal LK04_RS02670 0278433b9b7d94b221fe77bf82392619 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 3.0E-44 T 22-04-2016 IPR007416 Protein of unknown function DUF469 LK04_RS02670 0278433b9b7d94b221fe77bf82392619 108 PANTHER PTHR38778 2 108 3.0E-49 T 22-04-2016 LK04_RS02670 0278433b9b7d94b221fe77bf82392619 108 PANTHER PTHR38778:SF1 2 108 3.0E-49 T 22-04-2016 LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 Pfam PF03466 LysR substrate binding domain 94 304 5.4E-43 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 SUPERFAMILY SSF46785 12 118 7.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 SUPERFAMILY SSF53850 95 304 5.25E-41 T 22-04-2016 LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 Gene3D G3DSA:1.10.10.10 12 91 2.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 PANTHER PTHR30537 2 304 1.0E-89 T 22-04-2016 LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 Gene3D G3DSA:3.40.190.10 99 183 2.3E-25 T 22-04-2016 LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 Gene3D G3DSA:3.40.190.10 184 269 4.9E-23 T 22-04-2016 LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS16065 75b06970f53927664eb93d8b162e06de 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS17315 e1b07e73d3b9262674eb2135a3f5c1d4 331 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 4 325 53.202 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 LK04_RS17315 e1b07e73d3b9262674eb2135a3f5c1d4 331 SUPERFAMILY SSF51395 9 317 1.06E-73 T 22-04-2016 LK04_RS17315 e1b07e73d3b9262674eb2135a3f5c1d4 331 PANTHER PTHR11082 5 330 8.6E-162 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS17315 e1b07e73d3b9262674eb2135a3f5c1d4 331 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 9 324 1.3E-164 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 LK04_RS17315 e1b07e73d3b9262674eb2135a3f5c1d4 331 PIRSF PIRSF006621 2 325 1.5E-71 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS17315 e1b07e73d3b9262674eb2135a3f5c1d4 331 Gene3D G3DSA:3.20.20.70 8 250 7.8E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS17315 e1b07e73d3b9262674eb2135a3f5c1d4 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 90 108 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS17315 e1b07e73d3b9262674eb2135a3f5c1d4 331 PANTHER PTHR11082:SF29 5 330 8.6E-162 T 22-04-2016 LK04_RS17315 e1b07e73d3b9262674eb2135a3f5c1d4 331 Pfam PF01207 Dihydrouridine synthase (Dus) 12 318 6.1E-97 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS11545 ebfeadbfb6f207a1f14a1fb5c3d96f84 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site LK04_RS11545 ebfeadbfb6f207a1f14a1fb5c3d96f84 410 SMART SM00825 Beta-ketoacyl synthase 4 409 2.3E-12 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LK04_RS11545 ebfeadbfb6f207a1f14a1fb5c3d96f84 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 1.9E-42 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal LK04_RS11545 ebfeadbfb6f207a1f14a1fb5c3d96f84 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 363 1.0E-29 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal LK04_RS11545 ebfeadbfb6f207a1f14a1fb5c3d96f84 410 SUPERFAMILY SSF53901 216 407 3.9E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11545 ebfeadbfb6f207a1f14a1fb5c3d96f84 410 Gene3D G3DSA:3.40.47.10 2 259 1.0E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11545 ebfeadbfb6f207a1f14a1fb5c3d96f84 410 PANTHER PTHR11712 3 408 2.4E-111 T 22-04-2016 LK04_RS11545 ebfeadbfb6f207a1f14a1fb5c3d96f84 410 Gene3D G3DSA:3.40.47.10 263 408 1.5E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11545 ebfeadbfb6f207a1f14a1fb5c3d96f84 410 SUPERFAMILY SSF53901 2 251 6.86E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS11995 04b6d44838e7adf0bbe0edd9e6b5afef 183 SUPERFAMILY SSF55166 67 183 2.2E-32 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain LK04_RS11995 04b6d44838e7adf0bbe0edd9e6b5afef 183 Gene3D G3DSA:3.30.1380.10 56 183 5.6E-31 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain LK04_RS11995 04b6d44838e7adf0bbe0edd9e6b5afef 183 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.5E-60 T 22-04-2016 IPR010275 Protein of unknown function DUF882 LK04_RS11995 04b6d44838e7adf0bbe0edd9e6b5afef 183 PANTHER PTHR37425 1 182 2.2E-72 T 22-04-2016 LK04_RS18410 72d660e3dc49b08dee053abec52e4bc3 270 PANTHER PTHR30151 72 267 2.3E-47 T 22-04-2016 LK04_RS18410 72d660e3dc49b08dee053abec52e4bc3 270 Gene3D G3DSA:1.10.3720.10 71 262 8.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18410 72d660e3dc49b08dee053abec52e4bc3 270 PANTHER PTHR30151:SF0 72 267 2.3E-47 T 22-04-2016 LK04_RS18410 72d660e3dc49b08dee053abec52e4bc3 270 SUPERFAMILY SSF161098 71 257 2.35E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18410 72d660e3dc49b08dee053abec52e4bc3 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 262 3.9E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16500 4fa11240f8eac0b44dd9b835ff065c50 329 PANTHER PTHR30472:SF31 1 328 4.1E-145 T 22-04-2016 LK04_RS16500 4fa11240f8eac0b44dd9b835ff065c50 329 SUPERFAMILY SSF81345 3 322 7.98E-78 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS16500 4fa11240f8eac0b44dd9b835ff065c50 329 Pfam PF01032 FecCD transport family 13 322 9.7E-89 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS16500 4fa11240f8eac0b44dd9b835ff065c50 329 Gene3D G3DSA:1.10.3470.10 2 324 9.9E-97 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS16500 4fa11240f8eac0b44dd9b835ff065c50 329 PANTHER PTHR30472 1 328 4.1E-145 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS09440 2a4a2e5a88e7372648aea78bbc144443 211 SUPERFAMILY SSF89623 1 161 1.83E-36 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 LK04_RS09440 2a4a2e5a88e7372648aea78bbc144443 211 Pfam PF12408 Ribose-5-phosphate isomerase 166 210 4.4E-16 T 22-04-2016 IPR022133 Ribose-5-phosphate isomerase, C-terminal LK04_RS09440 2a4a2e5a88e7372648aea78bbc144443 211 Pfam PF02502 Ribose/Galactose Isomerase 3 144 3.2E-29 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 LK04_RS09440 2a4a2e5a88e7372648aea78bbc144443 211 PANTHER PTHR30345 1 206 3.1E-36 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 LK04_RS09440 2a4a2e5a88e7372648aea78bbc144443 211 Gene3D G3DSA:3.40.1400.10 1 210 3.2E-90 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 LK04_RS09440 2a4a2e5a88e7372648aea78bbc144443 211 PANTHER PTHR30345:SF0 1 206 3.1E-36 T 22-04-2016 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 Pfam PF02954 Bacterial regulatory protein, Fis family 427 466 1.6E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 Gene3D G3DSA:1.10.8.60 313 392 3.6E-23 T 22-04-2016 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 Gene3D G3DSA:3.40.50.300 138 312 2.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 SUPERFAMILY SSF52540 139 383 3.08E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 SMART SM00382 160 311 2.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 SUPERFAMILY SSF52172 6 185 1.42E-46 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 Gene3D G3DSA:1.10.10.60 398 469 9.8E-25 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 Gene3D G3DSA:3.40.50.2300 6 134 6.3E-38 T 22-04-2016 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 PANTHER PTHR32071:SF15 6 469 2.7E-258 T 22-04-2016 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 PANTHER PTHR32071 6 469 2.7E-258 T 22-04-2016 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 Pfam PF00158 Sigma-54 interaction domain 140 306 7.6E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 SUPERFAMILY SSF46689 380 469 8.24E-25 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 SMART SM00448 4 115 6.3E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 Pfam PF00072 Response regulator receiver domain 6 115 7.4E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS19200 f30a9134a45ee0cff05638b61491dd70 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 3.3E-245 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 LK04_RS01680 1ee89c356c948110bc459ef5fc65d8cd 471 PANTHER PTHR30068 2 469 1.5E-282 T 22-04-2016 LK04_RS01680 1ee89c356c948110bc459ef5fc65d8cd 471 SUPERFAMILY SSF51556 3 466 1.46E-178 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS01680 1ee89c356c948110bc459ef5fc65d8cd 471 Pfam PF02614 Glucuronate isomerase 1 465 3.2E-223 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 LK04_RS01680 1ee89c356c948110bc459ef5fc65d8cd 471 Gene3D G3DSA:3.20.20.140 3 44 3.0E-157 T 22-04-2016 LK04_RS01680 1ee89c356c948110bc459ef5fc65d8cd 471 Gene3D G3DSA:3.20.20.140 139 466 3.0E-157 T 22-04-2016 LK04_RS01680 1ee89c356c948110bc459ef5fc65d8cd 471 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 49.083 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 LK04_RS01680 1ee89c356c948110bc459ef5fc65d8cd 471 PANTHER PTHR30068:SF4 2 469 1.5E-282 T 22-04-2016 LK04_RS01680 1ee89c356c948110bc459ef5fc65d8cd 471 Gene3D G3DSA:1.10.2020.10 46 137 9.3E-43 T 22-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 LK04_RS04330 51cd9bdc770c3a4ae2e4c93563d9ddd2 346 PANTHER PTHR10520 4 333 1.8E-224 T 22-04-2016 LK04_RS04330 51cd9bdc770c3a4ae2e4c93563d9ddd2 346 Gene3D G3DSA:3.90.650.10 171 343 2.9E-69 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS04330 51cd9bdc770c3a4ae2e4c93563d9ddd2 346 SUPERFAMILY SSF56042 171 342 8.52E-64 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS04330 51cd9bdc770c3a4ae2e4c93563d9ddd2 346 SUPERFAMILY SSF55326 7 170 3.29E-52 T 22-04-2016 LK04_RS04330 51cd9bdc770c3a4ae2e4c93563d9ddd2 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 5.4E-153 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS04330 51cd9bdc770c3a4ae2e4c93563d9ddd2 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 46.907 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS04330 51cd9bdc770c3a4ae2e4c93563d9ddd2 346 Gene3D G3DSA:3.30.1330.10 22 170 1.2E-62 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LK04_RS04330 51cd9bdc770c3a4ae2e4c93563d9ddd2 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 342 3.8E-38 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS04330 51cd9bdc770c3a4ae2e4c93563d9ddd2 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 164 2.6E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LK04_RS18235 07b8a7a976d5690cd1579a6f9703d93f 289 Pfam PF07859 alpha/beta hydrolase fold 66 265 1.6E-10 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LK04_RS18235 07b8a7a976d5690cd1579a6f9703d93f 289 PANTHER PTHR23024:SF41 53 287 5.6E-47 T 22-04-2016 LK04_RS18235 07b8a7a976d5690cd1579a6f9703d93f 289 PANTHER PTHR23024 53 287 5.6E-47 T 22-04-2016 LK04_RS18235 07b8a7a976d5690cd1579a6f9703d93f 289 SUPERFAMILY SSF53474 44 271 2.81E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS18235 07b8a7a976d5690cd1579a6f9703d93f 289 Gene3D G3DSA:3.40.50.1820 42 287 7.0E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS06585 c63f2491d91a1050cf37e9b2162020b5 282 SUPERFAMILY SSF55729 3 261 1.03E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS06585 c63f2491d91a1050cf37e9b2162020b5 282 Gene3D G3DSA:3.40.630.30 3 122 2.1E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS06585 c63f2491d91a1050cf37e9b2162020b5 282 Pfam PF13673 Acetyltransferase (GNAT) domain 42 122 4.3E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS06585 c63f2491d91a1050cf37e9b2162020b5 282 PANTHER PTHR21471:SF60 40 225 7.8E-23 T 22-04-2016 LK04_RS06585 c63f2491d91a1050cf37e9b2162020b5 282 PANTHER PTHR21471 40 225 7.8E-23 T 22-04-2016 LK04_RS11195 43f5657b07da13c5b626ba4bfffefc9e 233 PANTHER PTHR24220 8 233 1.0E-123 T 22-04-2016 LK04_RS11195 43f5657b07da13c5b626ba4bfffefc9e 233 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS11195 43f5657b07da13c5b626ba4bfffefc9e 233 Pfam PF00005 ABC transporter 26 174 8.4E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS11195 43f5657b07da13c5b626ba4bfffefc9e 233 PANTHER PTHR24220:SF111 8 233 1.0E-123 T 22-04-2016 LK04_RS11195 43f5657b07da13c5b626ba4bfffefc9e 233 SMART SM00382 35 223 8.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS11195 43f5657b07da13c5b626ba4bfffefc9e 233 SUPERFAMILY SSF52540 6 227 9.32E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11195 43f5657b07da13c5b626ba4bfffefc9e 233 Gene3D G3DSA:3.40.50.300 5 227 7.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11195 43f5657b07da13c5b626ba4bfffefc9e 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 6.5E-109 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 LK04_RS05430 b939f6de1f03004b370aa168bd4fb5b9 426 SUPERFAMILY SSF103473 12 414 1.96E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05430 b939f6de1f03004b370aa168bd4fb5b9 426 Gene3D G3DSA:1.20.1250.20 12 196 1.8E-15 T 22-04-2016 LK04_RS05430 b939f6de1f03004b370aa168bd4fb5b9 426 Gene3D G3DSA:1.20.1250.20 224 414 1.4E-23 T 22-04-2016 LK04_RS05430 b939f6de1f03004b370aa168bd4fb5b9 426 Pfam PF07690 Major Facilitator Superfamily 19 314 1.2E-18 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS07060 1b7173ffa4a02cb0ed27d4eedfc7b01a 167 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 3 166 9.0E-86 T 22-04-2016 IPR022523 Flagellar regulator, FliZ LK04_RS07060 1b7173ffa4a02cb0ed27d4eedfc7b01a 167 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 166 4.7E-8 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LK04_RS05925 56534d582a5b26151ab34f76e6ff8b0e 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 1.2E-99 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LK04_RS05925 56534d582a5b26151ab34f76e6ff8b0e 266 Gene3D G3DSA:3.40.1190.20 6 263 3.6E-98 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS05925 56534d582a5b26151ab34f76e6ff8b0e 266 SUPERFAMILY SSF53613 5 266 2.81E-78 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS05925 56534d582a5b26151ab34f76e6ff8b0e 266 PANTHER PTHR20858 1 266 1.5E-113 T 22-04-2016 LK04_RS05925 56534d582a5b26151ab34f76e6ff8b0e 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 2.7E-91 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 LK04_RS05925 56534d582a5b26151ab34f76e6ff8b0e 266 PANTHER PTHR20858:SF17 1 266 1.5E-113 T 22-04-2016 LK04_RS12525 ffe37d87675fe96e59cd54bafc943753 283 PANTHER PTHR18966:SF152 22 277 1.4E-41 T 22-04-2016 LK04_RS12525 ffe37d87675fe96e59cd54bafc943753 283 Gene3D G3DSA:3.40.190.10 29 169 1.2E-46 T 22-04-2016 LK04_RS12525 ffe37d87675fe96e59cd54bafc943753 283 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 278 1.6E-58 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS12525 ffe37d87675fe96e59cd54bafc943753 283 PANTHER PTHR18966 22 277 1.4E-41 T 22-04-2016 LK04_RS12525 ffe37d87675fe96e59cd54bafc943753 283 Gene3D G3DSA:3.40.190.10 170 237 1.6E-17 T 22-04-2016 LK04_RS12525 ffe37d87675fe96e59cd54bafc943753 283 SUPERFAMILY SSF53850 11 280 1.53E-58 T 22-04-2016 LK04_RS12525 ffe37d87675fe96e59cd54bafc943753 283 SMART SM00062 33 280 4.0E-53 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS13570 3d800fdd4262e791a2e53302243ee63c 439 Pfam PF14378 PAP2 superfamily 76 200 5.3E-9 T 22-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 LK04_RS13570 3d800fdd4262e791a2e53302243ee63c 439 SUPERFAMILY SSF52799 303 432 4.53E-21 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like LK04_RS13570 3d800fdd4262e791a2e53302243ee63c 439 SMART SM00195 302 433 7.9E-7 T 22-04-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 LK04_RS13570 3d800fdd4262e791a2e53302243ee63c 439 Gene3D G3DSA:3.90.190.10 325 433 1.1E-16 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like LK04_RS13570 3d800fdd4262e791a2e53302243ee63c 439 PANTHER PTHR10159 290 430 3.1E-37 T 22-04-2016 IPR024950 Dual specificity phosphatase LK04_RS13570 3d800fdd4262e791a2e53302243ee63c 439 PANTHER PTHR10159 62 274 3.1E-37 T 22-04-2016 IPR024950 Dual specificity phosphatase LK04_RS13570 3d800fdd4262e791a2e53302243ee63c 439 Pfam PF00782 Dual specificity phosphatase, catalytic domain 355 431 1.4E-14 T 22-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 LK04_RS13570 3d800fdd4262e791a2e53302243ee63c 439 PANTHER PTHR10159:SF370 290 430 3.1E-37 T 22-04-2016 LK04_RS13570 3d800fdd4262e791a2e53302243ee63c 439 PANTHER PTHR10159:SF370 62 274 3.1E-37 T 22-04-2016 LK04_RS12900 efdd0b95d2c9aded8bc0a1d76ee76266 158 PANTHER PTHR30289:SF3 1 154 6.7E-98 T 22-04-2016 LK04_RS12900 efdd0b95d2c9aded8bc0a1d76ee76266 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 20 157 8.5E-40 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein LK04_RS12900 efdd0b95d2c9aded8bc0a1d76ee76266 158 Gene3D G3DSA:3.90.280.10 1 157 1.5E-58 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein LK04_RS12900 efdd0b95d2c9aded8bc0a1d76ee76266 158 SUPERFAMILY SSF49777 1 157 2.22E-52 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein LK04_RS12900 efdd0b95d2c9aded8bc0a1d76ee76266 158 PANTHER PTHR30289 1 154 6.7E-98 T 22-04-2016 LK04_RS12900 efdd0b95d2c9aded8bc0a1d76ee76266 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 155 3.6E-52 T 22-04-2016 IPR005247 YbhB/YbcL LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 PANTHER PTHR11811:SF25 1 467 1.6E-301 T 22-04-2016 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 PANTHER PTHR11811 1 467 1.6E-301 T 22-04-2016 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 Gene3D G3DSA:1.20.5.320 437 468 3.1E-22 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 Gene3D G3DSA:1.10.1040.10 181 435 1.5E-116 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 SUPERFAMILY SSF51735 4 172 1.71E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 467 1.9E-130 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 3.5E-228 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 PIRSF PIRSF000109 1 469 4.4E-241 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 6.1E-52 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 Gene3D G3DSA:3.40.50.720 1 180 3.3E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 SMART SM01350 179 468 4.6E-220 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LK04_RS06160 dac600e7bdbd85e7944e443251737deb 469 SUPERFAMILY SSF48179 177 468 2.89E-131 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS17740 637e9222399fbc1d63492a09b88dddef 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS17740 637e9222399fbc1d63492a09b88dddef 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 4.9E-138 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS17740 637e9222399fbc1d63492a09b88dddef 355 PANTHER PTHR21091:SF2 1 350 2.1E-163 T 22-04-2016 LK04_RS17740 637e9222399fbc1d63492a09b88dddef 355 PANTHER PTHR21091 1 350 2.1E-163 T 22-04-2016 LK04_RS17740 637e9222399fbc1d63492a09b88dddef 355 Gene3D G3DSA:3.20.20.210 2 353 7.5E-160 T 22-04-2016 LK04_RS17740 637e9222399fbc1d63492a09b88dddef 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 8.0E-144 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS17740 637e9222399fbc1d63492a09b88dddef 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS17740 637e9222399fbc1d63492a09b88dddef 355 SUPERFAMILY SSF51726 2 353 1.1E-124 T 22-04-2016 LK04_RS17740 637e9222399fbc1d63492a09b88dddef 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 51.014 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LK04_RS19700 8913d3efb3645e353b10cbea038870a5 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 43.008 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 LK04_RS19700 8913d3efb3645e353b10cbea038870a5 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 366 4.9E-186 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 LK04_RS19700 8913d3efb3645e353b10cbea038870a5 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site LK04_RS19700 8913d3efb3645e353b10cbea038870a5 367 SUPERFAMILY SSF53335 5 365 2.04E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS19700 8913d3efb3645e353b10cbea038870a5 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site LK04_RS19700 8913d3efb3645e353b10cbea038870a5 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 366 1.8E-185 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LK04_RS19700 8913d3efb3645e353b10cbea038870a5 367 PANTHER PTHR11061 1 366 3.5E-234 T 22-04-2016 LK04_RS19700 8913d3efb3645e353b10cbea038870a5 367 PANTHER PTHR11061:SF25 1 366 3.5E-234 T 22-04-2016 LK04_RS19700 8913d3efb3645e353b10cbea038870a5 367 Gene3D G3DSA:3.40.50.150 158 365 7.3E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 Gene3D G3DSA:3.30.1330.10 645 810 1.5E-14 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 Gene3D G3DSA:3.30.1330.10 211 421 9.7E-40 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 SUPERFAMILY SSF109736 155 220 3.79E-21 T 22-04-2016 LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1296 21.495 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 SUPERFAMILY SSF82697 1 152 2.41E-53 T 22-04-2016 LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 SUPERFAMILY SSF56042 432 615 1.64E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 PANTHER PTHR10099 1 1296 0.0 T 22-04-2016 LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 Gene3D G3DSA:3.40.50.880 1041 1264 4.1E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 PANTHER PTHR10099:SF5 1 1296 0.0 T 22-04-2016 LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 2.5E-103 T 22-04-2016 LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 SMART SM01211 1040 1295 3.8E-158 T 22-04-2016 LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 SUPERFAMILY SSF56042 821 1032 1.33E-55 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 SUPERFAMILY SSF55326 621 816 2.49E-64 T 22-04-2016 LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 832 967 1.4E-13 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 587 1.2E-25 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 SUPERFAMILY SSF52317 1036 1294 1.65E-97 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 SUPERFAMILY SSF55326 221 428 2.2E-65 T 22-04-2016 LK04_RS04080 03093ee55783259954b10539f5fde1bb 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1294 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS14545 faafad905102071d793769d97520fb05 155 Pfam PF00959 Phage lysozyme 74 137 8.0E-5 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 LK04_RS14545 faafad905102071d793769d97520fb05 155 SUPERFAMILY SSF53955 3 149 5.63E-28 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS14545 faafad905102071d793769d97520fb05 155 PRINTS PR00684 Phage T4 lysozyme signature 5 24 3.8E-5 T 22-04-2016 IPR001165 T4-type lysozyme GO:0003796|GO:0016998 LK04_RS14545 faafad905102071d793769d97520fb05 155 PRINTS PR00684 Phage T4 lysozyme signature 128 149 3.8E-5 T 22-04-2016 IPR001165 T4-type lysozyme GO:0003796|GO:0016998 LK04_RS14545 faafad905102071d793769d97520fb05 155 Gene3D G3DSA:1.10.530.40 3 152 9.9E-28 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 192 3.6E-4 T 22-04-2016 LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 Gene3D G3DSA:3.40.50.720 4 247 1.4E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 8.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PANTHER PTHR24322 156 190 1.1E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 PANTHER PTHR24322 6 139 1.1E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 2.0E-58 T 22-04-2016 LK04_RS02985 76c6883bf4a30c2e3e983458c51cc791 247 SUPERFAMILY SSF51735 4 246 4.78E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06055 a669ca441b08a875dabc808fe6a9cfd1 477 PANTHER PTHR30576:SF4 12 477 4.2E-179 T 22-04-2016 LK04_RS06055 a669ca441b08a875dabc808fe6a9cfd1 477 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 477 9.3E-118 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase LK04_RS06055 a669ca441b08a875dabc808fe6a9cfd1 477 PANTHER PTHR30576 12 477 4.2E-179 T 22-04-2016 LK04_RS06055 a669ca441b08a875dabc808fe6a9cfd1 477 Pfam PF13727 CoA-binding domain 84 204 1.4E-8 T 22-04-2016 LK04_RS06055 a669ca441b08a875dabc808fe6a9cfd1 477 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 17 477 2.3E-160 T 22-04-2016 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 LK04_RS06055 a669ca441b08a875dabc808fe6a9cfd1 477 Pfam PF02397 Bacterial sugar transferase 281 471 1.6E-55 T 22-04-2016 IPR003362 Bacterial sugar transferase LK04_RS06055 a669ca441b08a875dabc808fe6a9cfd1 477 Gene3D G3DSA:3.40.50.720 146 233 1.1E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS12680 217281f468e712872ea8f8f5710c2835 518 Pfam PF13347 MFS/sugar transport protein 17 454 2.0E-48 T 22-04-2016 LK04_RS12680 217281f468e712872ea8f8f5710c2835 518 PANTHER PTHR11328 15 495 3.9E-79 T 22-04-2016 LK04_RS12680 217281f468e712872ea8f8f5710c2835 518 PANTHER PTHR11328:SF24 15 495 3.9E-79 T 22-04-2016 LK04_RS12680 217281f468e712872ea8f8f5710c2835 518 SUPERFAMILY SSF103473 14 454 4.19E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS12680 217281f468e712872ea8f8f5710c2835 518 Gene3D G3DSA:1.20.1250.20 21 214 1.6E-15 T 22-04-2016 LK04_RS11990 e45818329b7d6eafcaa1456f3c405911 209 SUPERFAMILY SSF56281 3 209 1.02E-57 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS11990 e45818329b7d6eafcaa1456f3c405911 209 SMART SM00849 12 192 6.7E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS11990 e45818329b7d6eafcaa1456f3c405911 209 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 2.8E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS11990 e45818329b7d6eafcaa1456f3c405911 209 PANTHER PTHR11935:SF115 1 209 5.4E-122 T 22-04-2016 LK04_RS11990 e45818329b7d6eafcaa1456f3c405911 209 Gene3D G3DSA:3.60.15.10 2 209 3.2E-60 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS11990 e45818329b7d6eafcaa1456f3c405911 209 PANTHER PTHR11935 1 209 5.4E-122 T 22-04-2016 LK04_RS08155 364b18b3e77a880211411ebdeaba6fc1 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 18.904 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 LK04_RS08155 364b18b3e77a880211411ebdeaba6fc1 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 2.5E-69 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 LK04_RS08155 364b18b3e77a880211411ebdeaba6fc1 179 PANTHER PTHR36917:SF1 1 177 4.2E-78 T 22-04-2016 LK04_RS08155 364b18b3e77a880211411ebdeaba6fc1 179 PANTHER PTHR36917 1 177 4.2E-78 T 22-04-2016 LK04_RS08155 364b18b3e77a880211411ebdeaba6fc1 179 Pfam PF04279 Intracellular septation protein A 1 175 8.6E-68 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 LK04_RS09090 4b31bbbad9e5baecee389c7aa4724b89 321 Pfam PF13518 Helix-turn-helix domain 17 53 3.8E-6 T 22-04-2016 LK04_RS09090 4b31bbbad9e5baecee389c7aa4724b89 321 PANTHER PTHR34294 6 321 3.5E-115 T 22-04-2016 LK04_RS09090 4b31bbbad9e5baecee389c7aa4724b89 321 PANTHER PTHR34294:SF5 6 321 3.5E-115 T 22-04-2016 LK04_RS09090 4b31bbbad9e5baecee389c7aa4724b89 321 Gene3D G3DSA:3.40.50.1360 66 319 3.5E-71 T 22-04-2016 LK04_RS09090 4b31bbbad9e5baecee389c7aa4724b89 321 Pfam PF04198 Putative sugar-binding domain 63 318 1.5E-72 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 LK04_RS09090 4b31bbbad9e5baecee389c7aa4724b89 321 Gene3D G3DSA:1.10.10.10 23 60 1.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09090 4b31bbbad9e5baecee389c7aa4724b89 321 SUPERFAMILY SSF100950 67 317 4.35E-64 T 22-04-2016 LK04_RS09090 4b31bbbad9e5baecee389c7aa4724b89 321 SUPERFAMILY SSF46689 11 72 3.94E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS09670 a1c6b596b4a78ff1bb61247fef41f243 199 PANTHER PTHR30485:SF1 1 199 1.7E-44 T 22-04-2016 LK04_RS09670 a1c6b596b4a78ff1bb61247fef41f243 199 SUPERFAMILY SSF81342 4 199 9.42E-34 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 LK04_RS09670 a1c6b596b4a78ff1bb61247fef41f243 199 Gene3D G3DSA:1.20.950.20 2 199 6.6E-46 T 22-04-2016 LK04_RS09670 a1c6b596b4a78ff1bb61247fef41f243 199 PANTHER PTHR30485 1 199 1.7E-44 T 22-04-2016 LK04_RS09670 a1c6b596b4a78ff1bb61247fef41f243 199 Pfam PF01292 Prokaryotic cytochrome b561 10 188 4.2E-24 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LK04_RS11740 aa7fd8226fabf9d55b8aa4eca811dd08 131 SUPERFAMILY SSF55298 3 127 2.67E-35 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LK04_RS11740 aa7fd8226fabf9d55b8aa4eca811dd08 131 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 22-04-2016 IPR019897 RidA, conserved site LK04_RS11740 aa7fd8226fabf9d55b8aa4eca811dd08 131 PANTHER PTHR11803 5 128 2.2E-34 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family LK04_RS11740 aa7fd8226fabf9d55b8aa4eca811dd08 131 Pfam PF01042 Endoribonuclease L-PSP 14 125 2.4E-31 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family LK04_RS11740 aa7fd8226fabf9d55b8aa4eca811dd08 131 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 128 44.799 T 22-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC LK04_RS11740 aa7fd8226fabf9d55b8aa4eca811dd08 131 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 1.3E-75 T 22-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC LK04_RS11740 aa7fd8226fabf9d55b8aa4eca811dd08 131 Gene3D G3DSA:3.30.1330.40 3 127 9.1E-33 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LK04_RS16275 d047ece70e8307e66c59db731b295c62 253 PANTHER PTHR42637:SF1 1 252 1.5E-96 T 22-04-2016 LK04_RS16275 d047ece70e8307e66c59db731b295c62 253 PANTHER PTHR42637 1 252 1.5E-96 T 22-04-2016 LK04_RS16275 d047ece70e8307e66c59db731b295c62 253 Gene3D G3DSA:1.20.1260.10 6 57 5.3E-86 T 22-04-2016 IPR012347 Ferritin-related LK04_RS16275 d047ece70e8307e66c59db731b295c62 253 Gene3D G3DSA:1.20.1260.10 105 251 5.3E-86 T 22-04-2016 IPR012347 Ferritin-related LK04_RS16275 d047ece70e8307e66c59db731b295c62 253 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 6 248 1.6E-107 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 LK04_RS16275 d047ece70e8307e66c59db731b295c62 253 PIRSF PIRSF020736 1 253 1.2E-87 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 LK04_RS16275 d047ece70e8307e66c59db731b295c62 253 SUPERFAMILY SSF47240 105 251 2.69E-71 T 22-04-2016 IPR009078 Ferritin-like superfamily LK04_RS16275 d047ece70e8307e66c59db731b295c62 253 SUPERFAMILY SSF47240 7 57 2.69E-71 T 22-04-2016 IPR009078 Ferritin-like superfamily LK04_RS18690 81074a61701f541c5ac86e83bd55a3de 375 Pfam PF14897 EpsG family 33 363 1.9E-31 T 22-04-2016 LK04_RS07625 afb6034dc4d2b58a0e0c987c859e4ab7 155 Pfam PF05926 Phage head completion protein (GPL) 19 154 1.5E-42 T 22-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 LK04_RS10295 dc63c36c9649e3d33a57d892062aec4b 400 Gene3D G3DSA:1.20.1250.20 11 189 1.2E-26 T 22-04-2016 LK04_RS10295 dc63c36c9649e3d33a57d892062aec4b 400 Gene3D G3DSA:1.20.1250.20 210 377 2.4E-9 T 22-04-2016 LK04_RS10295 dc63c36c9649e3d33a57d892062aec4b 400 Pfam PF07690 Major Facilitator Superfamily 11 341 2.2E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS10295 dc63c36c9649e3d33a57d892062aec4b 400 PANTHER PTHR23502 7 353 8.2E-174 T 22-04-2016 LK04_RS10295 dc63c36c9649e3d33a57d892062aec4b 400 PANTHER PTHR23502:SF28 7 353 8.2E-174 T 22-04-2016 LK04_RS10295 dc63c36c9649e3d33a57d892062aec4b 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 374 3.2E-104 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 LK04_RS10295 dc63c36c9649e3d33a57d892062aec4b 400 SUPERFAMILY SSF103473 8 379 7.98E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.439 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.6E-45 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 Pfam PF00203 Ribosomal protein S19 3 83 6.0E-36 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 Gene3D G3DSA:3.30.860.10 1 91 2.8E-40 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 PANTHER PTHR11880 1 92 3.5E-57 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 SUPERFAMILY SSF54570 3 84 6.02E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 LK04_RS00890 707f49a5e41dfbeb219aeb4bac8402d7 92 PIRSF PIRSF002144 1 92 2.8E-31 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LK04_RS10345 c60dcacd99942b6f93593da15aee0b42 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 2.7E-42 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 LK04_RS10345 c60dcacd99942b6f93593da15aee0b42 138 Gene3D G3DSA:3.90.1010.10 4 136 2.2E-51 T 22-04-2016 LK04_RS10345 c60dcacd99942b6f93593da15aee0b42 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 39.441 T 22-04-2016 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 UniPathway: UPA00266 LK04_RS10345 c60dcacd99942b6f93593da15aee0b42 138 SUPERFAMILY SSF82649 4 135 1.62E-43 T 22-04-2016 LK04_RS10345 c60dcacd99942b6f93593da15aee0b42 138 PANTHER PTHR12735:SF26 1 138 3.1E-58 T 22-04-2016 LK04_RS10345 c60dcacd99942b6f93593da15aee0b42 138 PANTHER PTHR12735 1 138 3.1E-58 T 22-04-2016 LK04_RS15575 665ec22d97b1f8824430222a03cd318f 380 SUPERFAMILY SSF56935 43 380 7.63E-32 T 22-04-2016 LK04_RS15575 665ec22d97b1f8824430222a03cd318f 380 Pfam PF03797 Autotransporter beta-domain 210 320 1.0E-6 T 22-04-2016 IPR005546 Autotransporter beta-domain LK04_RS15575 665ec22d97b1f8824430222a03cd318f 380 Gene3D G3DSA:2.40.160.10 44 309 1.2E-41 T 22-04-2016 IPR023614 Porin domain LK04_RS09410 9e83d27026eeb7448c1c644eac7f2e67 384 Gene3D G3DSA:3.30.390.10 2 129 1.1E-31 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS09410 9e83d27026eeb7448c1c644eac7f2e67 384 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 32 125 5.7E-8 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LK04_RS09410 9e83d27026eeb7448c1c644eac7f2e67 384 PANTHER PTHR13794:SF4 1 384 1.6E-53 T 22-04-2016 LK04_RS09410 9e83d27026eeb7448c1c644eac7f2e67 384 SUPERFAMILY SSF51604 113 381 8.91E-60 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS09410 9e83d27026eeb7448c1c644eac7f2e67 384 PANTHER PTHR13794 1 384 1.6E-53 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS09410 9e83d27026eeb7448c1c644eac7f2e67 384 SMART SM00922 150 253 3.4E-18 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LK04_RS09410 9e83d27026eeb7448c1c644eac7f2e67 384 SUPERFAMILY SSF54826 2 127 8.92E-28 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS09410 9e83d27026eeb7448c1c644eac7f2e67 384 Gene3D G3DSA:3.20.20.120 130 368 2.2E-63 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS09410 9e83d27026eeb7448c1c644eac7f2e67 384 Pfam PF13378 Enolase C-terminal domain-like 153 372 4.2E-47 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS02250 a48c0afe736a5075bd55517c5cf20c23 347 SUPERFAMILY SSF52151 22 290 1.23E-42 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LK04_RS02250 a48c0afe736a5075bd55517c5cf20c23 347 PANTHER PTHR14226:SF25 1 309 2.2E-124 T 22-04-2016 LK04_RS02250 a48c0afe736a5075bd55517c5cf20c23 347 Pfam PF01734 Patatin-like phospholipase 27 195 2.9E-17 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 LK04_RS02250 a48c0afe736a5075bd55517c5cf20c23 347 PANTHER PTHR14226 1 309 2.2E-124 T 22-04-2016 LK04_RS10895 ca3482eeaf10e5f535272e2f6bba88a7 253 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 241 5.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS10895 ca3482eeaf10e5f535272e2f6bba88a7 253 PANTHER PTHR30151 1 249 5.9E-62 T 22-04-2016 LK04_RS10895 ca3482eeaf10e5f535272e2f6bba88a7 253 SUPERFAMILY SSF161098 54 235 1.44E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS10895 ca3482eeaf10e5f535272e2f6bba88a7 253 Gene3D G3DSA:1.10.3720.10 52 245 3.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 394 418 - T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 164 4.2E-79 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 394 412 4.2E-79 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 164 183 4.2E-79 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 418 436 4.2E-79 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 483 500 4.2E-79 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 73 98 4.2E-79 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 459 474 4.2E-79 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 294 313 4.2E-79 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 264 280 4.2E-79 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 Pfam PF01019 Gamma-glutamyltranspeptidase 66 575 3.8E-186 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 51 574 5.6E-212 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PANTHER PTHR11686:SF9 6 583 1.7E-235 T 22-04-2016 LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 SUPERFAMILY SSF56235 43 575 1.31E-197 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS17435 e803fd6eb6551027ae089796cf70ccb8 583 PANTHER PTHR11686 6 583 1.7E-235 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS18150 17d9cb204b72d1ed1435d3cc813037bc 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 4.4E-89 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LK04_RS18150 17d9cb204b72d1ed1435d3cc813037bc 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 3.3E-215 T 22-04-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315|UniPathway: UPA00566 LK04_RS18150 17d9cb204b72d1ed1435d3cc813037bc 376 SUPERFAMILY SSF53383 2 375 3.62E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS18150 17d9cb204b72d1ed1435d3cc813037bc 376 PANTHER PTHR30244:SF14 1 376 3.4E-270 T 22-04-2016 LK04_RS18150 17d9cb204b72d1ed1435d3cc813037bc 376 PIRSF PIRSF000390 1 376 1.6E-118 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LK04_RS18150 17d9cb204b72d1ed1435d3cc813037bc 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.818 T 22-04-2016 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315|UniPathway: UPA00566 LK04_RS18150 17d9cb204b72d1ed1435d3cc813037bc 376 PANTHER PTHR30244 1 376 3.4E-270 T 22-04-2016 LK04_RS18150 17d9cb204b72d1ed1435d3cc813037bc 376 Gene3D G3DSA:3.40.640.10 1 248 1.8E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS18150 17d9cb204b72d1ed1435d3cc813037bc 376 Gene3D G3DSA:3.90.1150.10 251 375 1.8E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 SMART SM00829 12 339 3.5E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 SUPERFAMILY SSF50129 1 174 1.11E-54 T 22-04-2016 IPR011032 GroES-like LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 341 5.9E-179 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 Pfam PF00107 Zinc-binding dehydrogenase 175 302 8.6E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 135 6.5E-32 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 SUPERFAMILY SSF51735 142 306 1.29E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 PANTHER PTHR11695:SF285 13 342 1.8E-154 T 22-04-2016 LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 341 60.361 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 Gene3D G3DSA:3.40.50.720 174 288 6.8E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 Gene3D G3DSA:3.90.180.10 1 173 5.3E-52 T 22-04-2016 IPR011032 GroES-like LK04_RS19445 a84fcfd1608e3a27400cb9a4d89f85bd 342 PANTHER PTHR11695 13 342 1.8E-154 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS09230 c042480bd71f17ae0f2f9193fafeae97 499 PANTHER PTHR35565:SF3 1 497 0.0 T 22-04-2016 LK04_RS09230 c042480bd71f17ae0f2f9193fafeae97 499 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 492 9.5E-191 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath LK04_RS09230 c042480bd71f17ae0f2f9193fafeae97 499 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 492 7.9E-218 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath LK04_RS09230 c042480bd71f17ae0f2f9193fafeae97 499 PANTHER PTHR35565 1 497 0.0 T 22-04-2016 LK04_RS02080 910bcb2a48b376632c387ad478ee7b42 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.5E-47 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 LK04_RS02080 910bcb2a48b376632c387ad478ee7b42 245 Gene3D G3DSA:3.40.1130.10 63 240 7.6E-16 T 22-04-2016 LK04_RS02080 910bcb2a48b376632c387ad478ee7b42 245 Pfam PF01553 Acyltransferase 60 180 3.7E-31 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS02080 910bcb2a48b376632c387ad478ee7b42 245 SUPERFAMILY SSF69593 2 241 1.96E-56 T 22-04-2016 LK04_RS02080 910bcb2a48b376632c387ad478ee7b42 245 PANTHER PTHR10434:SF20 1 245 2.2E-159 T 22-04-2016 LK04_RS02080 910bcb2a48b376632c387ad478ee7b42 245 SMART SM00563 67 182 3.0E-37 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS02080 910bcb2a48b376632c387ad478ee7b42 245 PANTHER PTHR10434 1 245 2.2E-159 T 22-04-2016 LK04_RS15660 874302a75d94877e7c6aae18c98a8e02 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.297 T 22-04-2016 IPR005583 Peroxide stress protein YaaA LK04_RS15660 874302a75d94877e7c6aae18c98a8e02 257 Pfam PF03883 Protein of unknown function (DUF328) 1 242 1.1E-90 T 22-04-2016 IPR005583 Peroxide stress protein YaaA LK04_RS15660 874302a75d94877e7c6aae18c98a8e02 257 PANTHER PTHR30283:SF3 2 254 1.1E-120 T 22-04-2016 LK04_RS15660 874302a75d94877e7c6aae18c98a8e02 257 PANTHER PTHR30283 2 254 1.1E-120 T 22-04-2016 LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 SUPERFAMILY SSF50998 29 382 3.61E-80 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 PANTHER PTHR32303:SF8 1 393 9.4E-184 T 22-04-2016 LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 Pfam PF13360 PQQ-like domain 79 301 1.9E-46 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 40.804 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 Gene3D G3DSA:2.140.10.10 4 392 1.7E-78 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 SMART SM00564 330 362 0.017 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 SMART SM00564 64 96 1.2E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 SMART SM00564 156 187 0.0075 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 SMART SM00564 116 147 0.052 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 SMART SM00564 252 283 3.8E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 SMART SM00564 201 232 74.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 SMART SM00564 290 321 70.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 PANTHER PTHR32303 1 393 9.4E-184 T 22-04-2016 LK04_RS04215 f492dd82cfe41928f8ed86601a1c656a 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 10 391 4.4E-137 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB LK04_RS06980 3db9119925980c80c88e8b73b4e8c5bf 222 SUPERFAMILY SSF51306 84 207 2.22E-14 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LK04_RS06980 3db9119925980c80c88e8b73b4e8c5bf 222 Pfam PF00717 Peptidase S24-like 129 178 7.6E-9 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B LK04_RS06980 3db9119925980c80c88e8b73b4e8c5bf 222 SMART SM00530 10 65 2.7E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS06980 3db9119925980c80c88e8b73b4e8c5bf 222 SUPERFAMILY SSF47413 1 70 4.1E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06980 3db9119925980c80c88e8b73b4e8c5bf 222 Gene3D G3DSA:2.10.109.10 120 212 1.4E-14 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LK04_RS06980 3db9119925980c80c88e8b73b4e8c5bf 222 PANTHER PTHR10245 7 104 8.0E-15 T 22-04-2016 LK04_RS06980 3db9119925980c80c88e8b73b4e8c5bf 222 Gene3D G3DSA:1.10.260.40 5 68 5.2E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06980 3db9119925980c80c88e8b73b4e8c5bf 222 Pfam PF01381 Helix-turn-helix 11 65 1.8E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS11250 a3e1734460538e6aaa513116cc637ccf 116 PANTHER PTHR23089:SF2 2 112 6.7E-48 T 22-04-2016 LK04_RS11250 a3e1734460538e6aaa513116cc637ccf 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site LK04_RS11250 a3e1734460538e6aaa513116cc637ccf 116 PRINTS PR00332 Histidine triad family signature 95 105 3.0E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LK04_RS11250 a3e1734460538e6aaa513116cc637ccf 116 PRINTS PR00332 Histidine triad family signature 6 22 3.0E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LK04_RS11250 a3e1734460538e6aaa513116cc637ccf 116 PRINTS PR00332 Histidine triad family signature 27 45 3.0E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LK04_RS11250 a3e1734460538e6aaa513116cc637ccf 116 Pfam PF01230 HIT domain 12 108 1.6E-28 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LK04_RS11250 a3e1734460538e6aaa513116cc637ccf 116 Gene3D G3DSA:3.30.428.10 3 110 1.2E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LK04_RS11250 a3e1734460538e6aaa513116cc637ccf 116 SUPERFAMILY SSF54197 2 113 1.27E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LK04_RS11250 a3e1734460538e6aaa513116cc637ccf 116 PANTHER PTHR23089 2 112 6.7E-48 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.9E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.9E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.9E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.9E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.9E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 6.9E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PANTHER PTHR24322 151 183 4.1E-78 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PANTHER PTHR24322 10 135 4.1E-78 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PANTHER PTHR24322:SF635 151 183 4.1E-78 T 22-04-2016 LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PANTHER PTHR24322:SF635 10 135 4.1E-78 T 22-04-2016 LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 2.7E-6 T 22-04-2016 LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 4.9E-103 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 SUPERFAMILY SSF51735 4 243 4.26E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.4E-69 T 22-04-2016 LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11305 d4ec968e49aa907197a1926f51f1578e 244 Gene3D G3DSA:3.40.50.720 1 243 4.4E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15295 bd520b6e323df031405de6941a7ea30f 451 PANTHER PTHR11785:SF26 2 447 0.0 T 22-04-2016 LK04_RS15295 bd520b6e323df031405de6941a7ea30f 451 PANTHER PTHR11785 2 447 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS15295 bd520b6e323df031405de6941a7ea30f 451 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LK04_RS15295 bd520b6e323df031405de6941a7ea30f 451 PIRSF PIRSF006060 1 450 7.4E-76 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS15295 bd520b6e323df031405de6941a7ea30f 451 Pfam PF00324 Amino acid permease 17 449 1.1E-123 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LK04_RS11280 030ed084d3def61b559c6eb540aef7d9 211 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.16 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 LK04_RS11280 030ed084d3def61b559c6eb540aef7d9 211 Pfam PF02223 Thymidylate kinase 8 196 2.1E-58 T 22-04-2016 LK04_RS11280 030ed084d3def61b559c6eb540aef7d9 211 SUPERFAMILY SSF52540 1 205 6.54E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS11280 030ed084d3def61b559c6eb540aef7d9 211 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 195 9.1E-64 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 LK04_RS11280 030ed084d3def61b559c6eb540aef7d9 211 PANTHER PTHR10344 1 207 7.2E-70 T 22-04-2016 LK04_RS11280 030ed084d3def61b559c6eb540aef7d9 211 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 LK04_RS11280 030ed084d3def61b559c6eb540aef7d9 211 Gene3D G3DSA:3.40.50.300 3 206 1.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01355 4b416aa0e11bcbeab9e8470f322a8e94 334 PANTHER PTHR10264 196 334 5.9E-116 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS01355 4b416aa0e11bcbeab9e8470f322a8e94 334 PANTHER PTHR10264 5 156 5.9E-116 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS01355 4b416aa0e11bcbeab9e8470f322a8e94 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 1.2E-33 T 22-04-2016 IPR001107 Band 7 domain LK04_RS01355 4b416aa0e11bcbeab9e8470f322a8e94 334 TIGRFAM TIGR01932 hflC: HflC protein 1 327 3.0E-139 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 LK04_RS01355 4b416aa0e11bcbeab9e8470f322a8e94 334 SMART SM00244 18 227 1.6E-39 T 22-04-2016 IPR001107 Band 7 domain LK04_RS01355 4b416aa0e11bcbeab9e8470f322a8e94 334 PANTHER PTHR10264:SF80 196 334 5.9E-116 T 22-04-2016 LK04_RS01355 4b416aa0e11bcbeab9e8470f322a8e94 334 PANTHER PTHR10264:SF80 5 156 5.9E-116 T 22-04-2016 LK04_RS01355 4b416aa0e11bcbeab9e8470f322a8e94 334 SUPERFAMILY SSF117892 197 233 2.88E-7 T 22-04-2016 IPR001107 Band 7 domain LK04_RS01355 4b416aa0e11bcbeab9e8470f322a8e94 334 PIRSF PIRSF005651 1 334 9.3E-106 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 LK04_RS01355 4b416aa0e11bcbeab9e8470f322a8e94 334 SUPERFAMILY SSF117892 56 159 1.44E-16 T 22-04-2016 IPR001107 Band 7 domain LK04_RS10435 caa3041eb1df9db2a5820417ac3340c8 327 Gene3D G3DSA:1.10.3470.10 9 326 5.2E-101 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS10435 caa3041eb1df9db2a5820417ac3340c8 327 Pfam PF01032 FecCD transport family 26 324 1.6E-87 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS10435 caa3041eb1df9db2a5820417ac3340c8 327 SUPERFAMILY SSF81345 9 324 5.89E-82 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS10435 caa3041eb1df9db2a5820417ac3340c8 327 PANTHER PTHR30472:SF29 4 327 3.0E-170 T 22-04-2016 LK04_RS10435 caa3041eb1df9db2a5820417ac3340c8 327 PANTHER PTHR30472 4 327 3.0E-170 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS18160 e4033753887eb40396d61045c3da068f 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.4E-158 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LK04_RS18160 e4033753887eb40396d61045c3da068f 293 Pfam PF00483 Nucleotidyl transferase 2 238 2.5E-71 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LK04_RS18160 e4033753887eb40396d61045c3da068f 293 Gene3D G3DSA:3.90.550.10 1 265 1.2E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS18160 e4033753887eb40396d61045c3da068f 293 PANTHER PTHR22572 2 267 4.0E-166 T 22-04-2016 LK04_RS18160 e4033753887eb40396d61045c3da068f 293 PANTHER PTHR22572:SF105 2 267 4.0E-166 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LK04_RS18160 e4033753887eb40396d61045c3da068f 293 SUPERFAMILY SSF53448 1 286 1.41E-92 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS16880 09320f209fa7135c492faecd45f0e761 293 PANTHER PTHR12110 1 293 1.3E-148 T 22-04-2016 LK04_RS16880 09320f209fa7135c492faecd45f0e761 293 SUPERFAMILY SSF51658 11 253 1.8E-41 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS16880 09320f209fa7135c492faecd45f0e761 293 PANTHER PTHR12110:SF18 1 293 1.3E-148 T 22-04-2016 LK04_RS16880 09320f209fa7135c492faecd45f0e761 293 Pfam PF01261 Xylose isomerase-like TIM barrel 20 238 2.8E-35 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS16880 09320f209fa7135c492faecd45f0e761 293 Gene3D G3DSA:3.20.20.150 1 253 2.1E-40 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS04370 b26db680a18b40713e629f3e2409357b 340 SMART SM00354 1 71 6.1E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS04370 b26db680a18b40713e629f3e2409357b 340 PANTHER PTHR30146 1 328 1.2E-87 T 22-04-2016 LK04_RS04370 b26db680a18b40713e629f3e2409357b 340 Gene3D G3DSA:3.40.50.2300 174 308 9.7E-43 T 22-04-2016 LK04_RS04370 b26db680a18b40713e629f3e2409357b 340 Gene3D G3DSA:1.10.260.40 6 53 5.9E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS04370 b26db680a18b40713e629f3e2409357b 340 SUPERFAMILY SSF47413 3 59 1.59E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS04370 b26db680a18b40713e629f3e2409357b 340 SUPERFAMILY SSF53822 59 310 1.79E-61 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS04370 b26db680a18b40713e629f3e2409357b 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 48 7.1E-9 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS04370 b26db680a18b40713e629f3e2409357b 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 307 5.8E-32 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LK04_RS04370 b26db680a18b40713e629f3e2409357b 340 Gene3D G3DSA:3.40.50.2300 54 173 1.7E-42 T 22-04-2016 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 SUPERFAMILY SSF51905 4 177 8.65E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 SUPERFAMILY SSF51905 268 385 8.65E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 Pfam PF01494 FAD binding domain 4 345 2.6E-27 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 PANTHER PTHR13789 1 400 1.2E-173 T 22-04-2016 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 PANTHER PTHR13789:SF5 1 400 1.2E-173 T 22-04-2016 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 2.0E-131 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 Gene3D G3DSA:3.30.9.10 168 274 0.001 T 22-04-2016 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 Gene3D G3DSA:3.30.9.10 332 360 0.001 T 22-04-2016 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.3E-18 T 22-04-2016 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 3.3E-18 T 22-04-2016 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 3.3E-18 T 22-04-2016 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 3.3E-18 T 22-04-2016 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 Gene3D G3DSA:3.50.50.60 279 316 4.1E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02965 1a848184d230b7167b7e3146889c777f 400 Gene3D G3DSA:3.50.50.60 1 167 4.1E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS14750 90c962e0c925e466e5d05d4a6b10211b 240 Pfam PF07729 FCD domain 88 210 1.2E-16 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS14750 90c962e0c925e466e5d05d4a6b10211b 240 Gene3D G3DSA:1.10.10.10 16 79 7.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14750 90c962e0c925e466e5d05d4a6b10211b 240 SUPERFAMILY SSF46785 18 82 4.87E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14750 90c962e0c925e466e5d05d4a6b10211b 240 SUPERFAMILY SSF48008 83 215 1.41E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS14750 90c962e0c925e466e5d05d4a6b10211b 240 PANTHER PTHR11751 17 106 1.3E-19 T 22-04-2016 LK04_RS14750 90c962e0c925e466e5d05d4a6b10211b 240 SMART SM00895 88 211 1.1E-11 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS14750 90c962e0c925e466e5d05d4a6b10211b 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 78 1.8E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS14750 90c962e0c925e466e5d05d4a6b10211b 240 Gene3D G3DSA:1.20.120.530 83 216 1.6E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS14750 90c962e0c925e466e5d05d4a6b10211b 240 SMART SM00345 20 78 1.0E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS10915 32090c111927841fb0cc576c3fc311be 320 SUPERFAMILY SSF143631 8 303 4.18E-87 T 22-04-2016 IPR003374 ApbE-like domain LK04_RS10915 32090c111927841fb0cc576c3fc311be 320 Pfam PF02424 ApbE family 15 292 1.3E-73 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 LK04_RS10915 32090c111927841fb0cc576c3fc311be 320 PANTHER PTHR30040 1 316 3.3E-87 T 22-04-2016 LK04_RS10915 32090c111927841fb0cc576c3fc311be 320 PIRSF PIRSF006268 2 313 1.8E-88 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 LK04_RS10915 32090c111927841fb0cc576c3fc311be 320 PANTHER PTHR30040:SF2 1 316 3.3E-87 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 LK04_RS14150 19518a739506b70e548c37f7de03f25b 356 SUPERFAMILY SSF111337 1 343 7.72E-135 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS14150 19518a739506b70e548c37f7de03f25b 356 PANTHER PTHR30307:SF0 2 350 9.8E-185 T 22-04-2016 LK04_RS14150 19518a739506b70e548c37f7de03f25b 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 2.3E-130 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS14150 19518a739506b70e548c37f7de03f25b 356 PANTHER PTHR30307 2 350 9.8E-185 T 22-04-2016 LK04_RS14150 19518a739506b70e548c37f7de03f25b 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 3.3E-159 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS14150 19518a739506b70e548c37f7de03f25b 356 Gene3D G3DSA:3.40.1780.10 1 62 4.2E-99 T 22-04-2016 LK04_RS14150 19518a739506b70e548c37f7de03f25b 356 Gene3D G3DSA:3.40.1780.10 179 344 4.2E-99 T 22-04-2016 LK04_RS14150 19518a739506b70e548c37f7de03f25b 356 Gene3D G3DSA:2.40.10.240 64 142 7.6E-18 T 22-04-2016 LK04_RS14150 19518a739506b70e548c37f7de03f25b 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 46.551 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS01115 77943165d0947309d04f82b41d08df1d 366 SUPERFAMILY SSF161098 153 345 1.13E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS01115 77943165d0947309d04f82b41d08df1d 366 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 3.7E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS01115 77943165d0947309d04f82b41d08df1d 366 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 359 2.9E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS01115 77943165d0947309d04f82b41d08df1d 366 PANTHER PTHR30085 63 366 9.9E-179 T 22-04-2016 LK04_RS01115 77943165d0947309d04f82b41d08df1d 366 PANTHER PTHR30085:SF3 63 366 9.9E-179 T 22-04-2016 LK04_RS01115 77943165d0947309d04f82b41d08df1d 366 Gene3D G3DSA:1.10.3720.10 152 360 7.6E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 Gene3D G3DSA:4.10.640.10 8 74 7.9E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 PANTHER PTHR13479 2 74 2.7E-34 T 22-04-2016 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 Pfam PF01084 Ribosomal protein S18 19 68 4.2E-24 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.759 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 SUPERFAMILY SSF46911 3 74 1.07E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.3E-36 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01420 3f4b75464bdfc56f443a4f9c474a954f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 1.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03385 c18712af67ea246b79d9070ca18eb57b 255 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 255 69.376 T 22-04-2016 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20|UniPathway: UPA00565 LK04_RS03385 c18712af67ea246b79d9070ca18eb57b 255 PANTHER PTHR30502 1 254 2.0E-167 T 22-04-2016 LK04_RS03385 c18712af67ea246b79d9070ca18eb57b 255 Gene3D G3DSA:3.20.20.60 4 253 3.8E-78 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS03385 c18712af67ea246b79d9070ca18eb57b 255 SUPERFAMILY SSF51621 4 254 5.23E-83 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LK04_RS03385 c18712af67ea246b79d9070ca18eb57b 255 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 245 1.4E-58 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 LK04_RS03385 c18712af67ea246b79d9070ca18eb57b 255 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 7 255 1.4E-141 T 22-04-2016 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20|UniPathway: UPA00565 LK04_RS03385 c18712af67ea246b79d9070ca18eb57b 255 PANTHER PTHR30502:SF4 1 254 2.0E-167 T 22-04-2016 LK04_RS08795 37807865d0b6b5a3b15fb5b6c62a546b 260 Pfam PF13478 XdhC Rossmann domain 110 249 1.6E-35 T 22-04-2016 IPR027051 XdhC Rossmann domain LK04_RS08795 37807865d0b6b5a3b15fb5b6c62a546b 260 SUPERFAMILY SSF51735 106 195 2.12E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08795 37807865d0b6b5a3b15fb5b6c62a546b 260 Pfam PF02625 XdhC and CoxI family 14 71 1.7E-13 T 22-04-2016 IPR003777 XdhC- CoxI LK04_RS08795 37807865d0b6b5a3b15fb5b6c62a546b 260 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 21 250 4.5E-86 T 22-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC LK04_RS08795 37807865d0b6b5a3b15fb5b6c62a546b 260 PANTHER PTHR30388:SF5 3 254 3.3E-88 T 22-04-2016 LK04_RS08795 37807865d0b6b5a3b15fb5b6c62a546b 260 PANTHER PTHR30388 3 254 3.3E-88 T 22-04-2016 LK04_RS08690 d0f09dd0eaaa6575b3410c849367c1a4 217 Gene3D G3DSA:1.10.10.60 11 78 2.9E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08690 d0f09dd0eaaa6575b3410c849367c1a4 217 PANTHER PTHR30055 7 211 2.8E-72 T 22-04-2016 LK04_RS08690 d0f09dd0eaaa6575b3410c849367c1a4 217 SUPERFAMILY SSF48498 93 206 1.59E-26 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LK04_RS08690 d0f09dd0eaaa6575b3410c849367c1a4 217 PANTHER PTHR30055:SF34 7 211 2.8E-72 T 22-04-2016 LK04_RS08690 d0f09dd0eaaa6575b3410c849367c1a4 217 SUPERFAMILY SSF46689 11 87 3.28E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS08690 d0f09dd0eaaa6575b3410c849367c1a4 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 3.3E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS08690 d0f09dd0eaaa6575b3410c849367c1a4 217 Gene3D G3DSA:1.10.357.10 88 208 3.0E-38 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS03875 7e7deb60eb2943b174ecbc741e35e138 277 SMART SM00382 30 237 2.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS03875 7e7deb60eb2943b174ecbc741e35e138 277 PANTHER PTHR24220 8 255 4.7E-91 T 22-04-2016 LK04_RS03875 7e7deb60eb2943b174ecbc741e35e138 277 SUPERFAMILY SSF52540 7 246 1.86E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03875 7e7deb60eb2943b174ecbc741e35e138 277 Pfam PF00005 ABC transporter 23 180 1.2E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS03875 7e7deb60eb2943b174ecbc741e35e138 277 Gene3D G3DSA:3.40.50.300 6 250 4.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03875 7e7deb60eb2943b174ecbc741e35e138 277 PANTHER PTHR24220:SF442 8 255 4.7E-91 T 22-04-2016 LK04_RS00350 e12572d1f90e5f6c79c831c9a347e664 330 SUPERFAMILY SSF53448 27 191 6.19E-20 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS00350 e12572d1f90e5f6c79c831c9a347e664 330 Pfam PF05704 Capsular polysaccharide synthesis protein 33 188 1.1E-23 T 22-04-2016 IPR008441 Capsular polysaccharide synthesis LK04_RS03860 c2697d739f895100427c4c713d9af6ba 281 SUPERFAMILY SSF161098 88 268 1.7E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03860 c2697d739f895100427c4c713d9af6ba 281 Gene3D G3DSA:1.10.3720.10 79 275 2.0E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03860 c2697d739f895100427c4c713d9af6ba 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 275 2.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03860 c2697d739f895100427c4c713d9af6ba 281 PANTHER PTHR30151:SF0 34 279 1.6E-95 T 22-04-2016 LK04_RS03860 c2697d739f895100427c4c713d9af6ba 281 PANTHER PTHR30151 34 279 1.6E-95 T 22-04-2016 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 SMART SM01240 7 344 7.0E-138 T 22-04-2016 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 2.6E-79 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 PANTHER PTHR11911 181 344 2.0E-213 T 22-04-2016 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 PANTHER PTHR11911 1 163 2.0E-213 T 22-04-2016 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 PIRSF PIRSF000235 1 346 1.5E-197 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 PANTHER PTHR11911:SF97 181 344 2.0E-213 T 22-04-2016 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 PANTHER PTHR11911:SF97 1 163 2.0E-213 T 22-04-2016 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 SUPERFAMILY SSF51412 6 334 2.22E-99 T 22-04-2016 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 Gene3D G3DSA:3.20.20.70 2 343 1.4E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.1E-200 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 LK04_RS15340 a19162d673084c936aaa71837b742e12 346 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.509 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 Gene3D G3DSA:3.30.870.10 231 449 5.7E-51 T 22-04-2016 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 Gene3D G3DSA:3.30.870.10 25 200 6.2E-45 T 22-04-2016 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 PANTHER PTHR21248 377 471 2.6E-191 T 22-04-2016 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 PANTHER PTHR21248 17 360 2.6E-191 T 22-04-2016 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 SMART SM00155 376 403 3.6E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 SMART SM00155 138 165 0.0077 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 Hamap MF_01918 Cardiolipin synthase C [clsC]. 53 486 72.246 T 22-04-2016 IPR030871 Cardiolipin synthase C GO:0032049|GO:0090483 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 SUPERFAMILY SSF56024 23 200 1.07E-43 T 22-04-2016 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 SUPERFAMILY SSF56024 254 449 8.97E-34 T 22-04-2016 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 PANTHER PTHR21248:SF12 377 471 2.6E-191 T 22-04-2016 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 PANTHER PTHR21248:SF12 17 360 2.6E-191 T 22-04-2016 LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 Pfam PF13091 PLD-like domain 285 428 4.6E-26 T 22-04-2016 IPR025202 Phospholipase D-like domain LK04_RS11530 c316d5f7935ddd7a391ea3dc367a032c 486 Pfam PF13091 PLD-like domain 52 197 9.7E-18 T 22-04-2016 IPR025202 Phospholipase D-like domain LK04_RS09505 bfd5024b7d95e00b1ca5a9ece9f57660 455 PANTHER PTHR33843:SF4 1 453 5.4E-168 T 22-04-2016 LK04_RS09505 bfd5024b7d95e00b1ca5a9ece9f57660 455 Pfam PF03611 PTS system sugar-specific permease component 12 406 1.1E-123 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 LK04_RS09505 bfd5024b7d95e00b1ca5a9ece9f57660 455 PANTHER PTHR33843 1 453 5.4E-168 T 22-04-2016 LK04_RS00150 af45a52258c09eb71930731559955e9d 374 SUPERFAMILY SSF55729 173 343 2.33E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS00150 af45a52258c09eb71930731559955e9d 374 Gene3D G3DSA:3.40.630.30 173 321 2.2E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS00150 af45a52258c09eb71930731559955e9d 374 PANTHER PTHR31384:SF26 21 305 2.1E-53 T 22-04-2016 LK04_RS00150 af45a52258c09eb71930731559955e9d 374 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 371 1.9E-144 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition LK04_RS00150 af45a52258c09eb71930731559955e9d 374 PANTHER PTHR31384 21 305 2.1E-53 T 22-04-2016 LK04_RS14640 2bebed65e9f55c658f1045b46591fd88 339 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 34 329 2.4E-92 T 22-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 LK04_RS14640 2bebed65e9f55c658f1045b46591fd88 339 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 336 36.092 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 LK04_RS14640 2bebed65e9f55c658f1045b46591fd88 339 Pfam PF01008 Initiation factor 2 subunit family 48 329 6.2E-68 T 22-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 LK04_RS14640 2bebed65e9f55c658f1045b46591fd88 339 PANTHER PTHR10233 2 336 1.2E-136 T 22-04-2016 LK04_RS14640 2bebed65e9f55c658f1045b46591fd88 339 PANTHER PTHR10233:SF6 2 336 1.2E-136 T 22-04-2016 LK04_RS14640 2bebed65e9f55c658f1045b46591fd88 339 Gene3D G3DSA:1.20.120.420 8 146 6.4E-37 T 22-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 LK04_RS14640 2bebed65e9f55c658f1045b46591fd88 339 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 8 328 1.3E-123 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 LK04_RS14640 2bebed65e9f55c658f1045b46591fd88 339 Gene3D G3DSA:3.40.50.10470 147 334 2.8E-65 T 22-04-2016 LK04_RS14640 2bebed65e9f55c658f1045b46591fd88 339 SUPERFAMILY SSF100950 9 334 1.05E-106 T 22-04-2016 LK04_RS01960 3263e9c1790e81b7b861aaa9d92f66ba 218 Gene3D G3DSA:3.90.870.10 12 214 1.8E-91 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LK04_RS01960 3263e9c1790e81b7b861aaa9d92f66ba 218 SUPERFAMILY SSF55821 7 212 1.72E-83 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LK04_RS01960 3263e9c1790e81b7b861aaa9d92f66ba 218 PANTHER PTHR21327 1 215 4.6E-153 T 22-04-2016 LK04_RS01960 3263e9c1790e81b7b861aaa9d92f66ba 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 7.1E-81 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS01960 3263e9c1790e81b7b861aaa9d92f66ba 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 209 2.2E-81 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS01960 3263e9c1790e81b7b861aaa9d92f66ba 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 41.936 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LK04_RS01960 3263e9c1790e81b7b861aaa9d92f66ba 218 PANTHER PTHR21327:SF15 1 215 4.6E-153 T 22-04-2016 LK04_RS16240 2eee43386fa8d98d48e16336dbee20a3 426 Pfam PF04286 Protein of unknown function (DUF445) 44 417 1.1E-103 T 22-04-2016 IPR007383 Protein of unknown function DUF445 LK04_RS16240 2eee43386fa8d98d48e16336dbee20a3 426 SUPERFAMILY SSF48371 131 380 8.64E-6 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 LK04_RS16240 2eee43386fa8d98d48e16336dbee20a3 426 PANTHER PTHR38442 1 421 4.3E-147 T 22-04-2016 LK04_RS03355 a2fab7a00e3492a4b7afaddf2fcd2d05 259 SUPERFAMILY SSF55120 2 237 1.41E-61 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03355 a2fab7a00e3492a4b7afaddf2fcd2d05 259 PANTHER PTHR11079:SF60 3 245 2.1E-90 T 22-04-2016 LK04_RS03355 a2fab7a00e3492a4b7afaddf2fcd2d05 259 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03355 a2fab7a00e3492a4b7afaddf2fcd2d05 259 Pfam PF00849 RNA pseudouridylate synthase 11 168 7.2E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS03355 a2fab7a00e3492a4b7afaddf2fcd2d05 259 PANTHER PTHR11079 3 245 2.1E-90 T 22-04-2016 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 149 831 8.1E-281 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 Pfam PF07238 PilZ domain 697 793 8.2E-10 T 22-04-2016 IPR009875 PilZ domain GO:0035438 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 PANTHER PTHR10587:SF94 181 717 6.1E-117 T 22-04-2016 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 Gene3D G3DSA:3.90.550.10 275 510 4.8E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 SUPERFAMILY SSF141371 699 785 1.75E-8 T 22-04-2016 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 PANTHER PTHR10587 181 717 6.1E-117 T 22-04-2016 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 PRINTS PR01439 Cellulose synthase subunit A signature 527 553 3.2E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 PRINTS PR01439 Cellulose synthase subunit A signature 556 575 3.2E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 PRINTS PR01439 Cellulose synthase subunit A signature 670 691 3.2E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 PRINTS PR01439 Cellulose synthase subunit A signature 284 303 3.2E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 PRINTS PR01439 Cellulose synthase subunit A signature 229 254 3.2E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 PRINTS PR01439 Cellulose synthase subunit A signature 596 615 3.2E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 PRINTS PR01439 Cellulose synthase subunit A signature 201 221 3.2E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 PRINTS PR01439 Cellulose synthase subunit A signature 366 390 3.2E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 Pfam PF03552 Cellulose synthase 454 576 7.0E-13 T 22-04-2016 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 Pfam PF00535 Glycosyl transferase family 2 278 450 1.2E-31 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS18280 57946f7915173e2cc6dcced9d478a5eb 871 SUPERFAMILY SSF53448 274 557 8.13E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS19235 b8307feb8084111b6cc838754a904165 315 Pfam PF00583 Acetyltransferase (GNAT) family 50 122 3.8E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS19235 b8307feb8084111b6cc838754a904165 315 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 1.2E-47 T 22-04-2016 IPR012660 Thioesterase, putative LK04_RS19235 b8307feb8084111b6cc838754a904165 315 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 2.9E-48 T 22-04-2016 IPR012660 Thioesterase, putative LK04_RS19235 b8307feb8084111b6cc838754a904165 315 SUPERFAMILY SSF54637 155 297 6.34E-41 T 22-04-2016 IPR029069 HotDog domain LK04_RS19235 b8307feb8084111b6cc838754a904165 315 PANTHER PTHR23091 1 178 6.8E-105 T 22-04-2016 LK04_RS19235 b8307feb8084111b6cc838754a904165 315 SUPERFAMILY SSF55729 2 145 8.06E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS19235 b8307feb8084111b6cc838754a904165 315 PANTHER PTHR23091:SF249 1 178 6.8E-105 T 22-04-2016 LK04_RS19235 b8307feb8084111b6cc838754a904165 315 Gene3D G3DSA:3.10.129.10 150 298 3.0E-63 T 22-04-2016 IPR029069 HotDog domain LK04_RS19235 b8307feb8084111b6cc838754a904165 315 Gene3D G3DSA:3.40.630.30 7 149 9.3E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS17210 ac07f28d328c318eaa727aaa1cb52869 449 PANTHER PTHR11119:SF43 7 444 2.0E-271 T 22-04-2016 LK04_RS17210 ac07f28d328c318eaa727aaa1cb52869 449 PANTHER PTHR11119 7 444 2.0E-271 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS17210 ac07f28d328c318eaa727aaa1cb52869 449 Pfam PF00860 Permease family 26 409 1.2E-77 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS17465 af4b6bd7e51b7849f24be69ff0cc3cfa 438 SUPERFAMILY SSF53850 28 426 9.83E-74 T 22-04-2016 LK04_RS17465 af4b6bd7e51b7849f24be69ff0cc3cfa 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 141 158 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 LK04_RS17465 af4b6bd7e51b7849f24be69ff0cc3cfa 438 PANTHER PTHR30061 10 438 4.2E-169 T 22-04-2016 LK04_RS17465 af4b6bd7e51b7849f24be69ff0cc3cfa 438 Gene3D G3DSA:3.40.190.10 146 346 7.6E-39 T 22-04-2016 LK04_RS17465 af4b6bd7e51b7849f24be69ff0cc3cfa 438 Pfam PF13416 Bacterial extracellular solute-binding protein 46 368 6.9E-43 T 22-04-2016 LK04_RS17465 af4b6bd7e51b7849f24be69ff0cc3cfa 438 PANTHER PTHR30061:SF7 10 438 4.2E-169 T 22-04-2016 LK04_RS13445 faa32c60a52b99ef4b8ecfa844c3dea7 451 PANTHER PTHR11751 84 438 7.2E-41 T 22-04-2016 LK04_RS13445 faa32c60a52b99ef4b8ecfa844c3dea7 451 Pfam PF00155 Aminotransferase class I and II 121 437 2.2E-21 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS13445 faa32c60a52b99ef4b8ecfa844c3dea7 451 Gene3D G3DSA:1.10.10.10 23 85 1.9E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13445 faa32c60a52b99ef4b8ecfa844c3dea7 451 SUPERFAMILY SSF46785 28 90 2.57E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13445 faa32c60a52b99ef4b8ecfa844c3dea7 451 Gene3D G3DSA:3.40.640.10 131 342 2.4E-38 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS13445 faa32c60a52b99ef4b8ecfa844c3dea7 451 SUPERFAMILY SSF53383 105 437 4.26E-54 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS13445 faa32c60a52b99ef4b8ecfa844c3dea7 451 SMART SM00345 22 81 4.3E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS13445 faa32c60a52b99ef4b8ecfa844c3dea7 451 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 81 9.0E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS08615 3d5a85574adcdee41ee31627ebf21186 259 PANTHER PTHR18966:SF237 20 250 1.2E-55 T 22-04-2016 LK04_RS08615 3d5a85574adcdee41ee31627ebf21186 259 Gene3D G3DSA:3.40.190.10 22 110 1.6E-36 T 22-04-2016 LK04_RS08615 3d5a85574adcdee41ee31627ebf21186 259 Gene3D G3DSA:3.40.190.10 212 251 1.6E-36 T 22-04-2016 LK04_RS08615 3d5a85574adcdee41ee31627ebf21186 259 SUPERFAMILY SSF53850 1 251 6.79E-59 T 22-04-2016 LK04_RS08615 3d5a85574adcdee41ee31627ebf21186 259 PANTHER PTHR18966 20 250 1.2E-55 T 22-04-2016 LK04_RS08615 3d5a85574adcdee41ee31627ebf21186 259 Gene3D G3DSA:3.40.190.10 111 208 2.6E-27 T 22-04-2016 LK04_RS08615 3d5a85574adcdee41ee31627ebf21186 259 SMART SM00062 24 253 4.0E-61 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS08615 3d5a85574adcdee41ee31627ebf21186 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LK04_RS08615 3d5a85574adcdee41ee31627ebf21186 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 250 1.3E-52 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS07380 e0c5f7bed60410d8d613c8ae466a9dd7 322 PANTHER PTHR10108 57 321 7.7E-137 T 22-04-2016 LK04_RS07380 e0c5f7bed60410d8d613c8ae466a9dd7 322 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 320 4.2E-145 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 LK04_RS07380 e0c5f7bed60410d8d613c8ae466a9dd7 322 Gene3D G3DSA:3.40.50.150 91 314 2.0E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS07380 e0c5f7bed60410d8d613c8ae466a9dd7 322 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 321 53.964 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 LK04_RS07380 e0c5f7bed60410d8d613c8ae466a9dd7 322 SUPERFAMILY SSF53335 90 322 8.22E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS07380 e0c5f7bed60410d8d613c8ae466a9dd7 322 PANTHER PTHR10108:SF847 57 321 7.7E-137 T 22-04-2016 LK04_RS07380 e0c5f7bed60410d8d613c8ae466a9dd7 322 Pfam PF08003 Protein of unknown function (DUF1698) 7 321 2.7E-162 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like LK04_RS03235 42f3b1b1889fbda452c2f0e6e7997615 80 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 11 80 2.1E-20 T 22-04-2016 IPR022204 Prepilin peptidase dependent protein C LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 PANTHER PTHR11564:SF16 223 531 2.3E-152 T 22-04-2016 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 Gene3D G3DSA:3.40.50.300 325 527 1.9E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 SUPERFAMILY SSF52540 321 527 1.25E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 Pfam PF00448 SRP54-type protein, GTPase domain 327 527 2.7E-79 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 256 528 65.169 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 Gene3D G3DSA:1.20.120.140 218 309 2.2E-35 T 22-04-2016 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 SMART SM00963 233 313 8.3E-25 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 SMART SM00962 327 528 6.7E-125 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 256 527 1.5E-114 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 501 514 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 Pfam PF02881 SRP54-type protein, helical bundle domain 244 309 3.3E-13 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 SUPERFAMILY SSF47364 228 306 1.7E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 PANTHER PTHR11564 223 531 2.3E-152 T 22-04-2016 LK04_RS17515 0c593ace78d745f5bb04c1d30f04e998 531 SMART SM00382 326 517 9.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS15145 ef035b982a2da30d3ef71cc46a1240f3 307 Gene3D G3DSA:3.40.50.300 3 228 7.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15145 ef035b982a2da30d3ef71cc46a1240f3 307 SUPERFAMILY SSF52540 3 232 3.09E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15145 ef035b982a2da30d3ef71cc46a1240f3 307 SMART SM00382 30 212 3.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS15145 ef035b982a2da30d3ef71cc46a1240f3 307 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS15145 ef035b982a2da30d3ef71cc46a1240f3 307 Pfam PF00005 ABC transporter 21 165 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS15145 ef035b982a2da30d3ef71cc46a1240f3 307 PANTHER PTHR24220 6 303 3.8E-184 T 22-04-2016 LK04_RS15145 ef035b982a2da30d3ef71cc46a1240f3 307 PANTHER PTHR24220:SF305 6 303 3.8E-184 T 22-04-2016 LK04_RS10960 f31902c1532b166c1f7d8411709c87ca 186 Gene3D G3DSA:1.10.3480.10 1 181 1.4E-50 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone LK04_RS10960 f31902c1532b166c1f7d8411709c87ca 186 Pfam PF02613 Nitrate reductase delta subunit 36 147 1.7E-16 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone LK04_RS10960 f31902c1532b166c1f7d8411709c87ca 186 PIRSF PIRSF004690 1 186 1.2E-58 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type LK04_RS10960 f31902c1532b166c1f7d8411709c87ca 186 PANTHER PTHR34227 1 185 1.4E-76 T 22-04-2016 LK04_RS10960 f31902c1532b166c1f7d8411709c87ca 186 PANTHER PTHR34227:SF2 1 185 1.4E-76 T 22-04-2016 LK04_RS10960 f31902c1532b166c1f7d8411709c87ca 186 SUPERFAMILY SSF89155 2 180 1.7E-45 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone LK04_RS13695 1d16a477943c3cae975b0582b40e7cb8 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS13695 1d16a477943c3cae975b0582b40e7cb8 228 Gene3D G3DSA:3.40.50.300 5 227 2.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13695 1d16a477943c3cae975b0582b40e7cb8 228 SMART SM00382 35 223 1.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS13695 1d16a477943c3cae975b0582b40e7cb8 228 PANTHER PTHR24220 8 227 3.6E-113 T 22-04-2016 LK04_RS13695 1d16a477943c3cae975b0582b40e7cb8 228 PANTHER PTHR24220:SF509 8 227 3.6E-113 T 22-04-2016 LK04_RS13695 1d16a477943c3cae975b0582b40e7cb8 228 Pfam PF00005 ABC transporter 27 174 4.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS13695 1d16a477943c3cae975b0582b40e7cb8 228 SUPERFAMILY SSF52540 7 227 2.18E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02260 01d62efbb1991dc2f602d540c4715522 259 PANTHER PTHR10889:SF3 6 257 2.4E-116 T 22-04-2016 LK04_RS02260 01d62efbb1991dc2f602d540c4715522 259 SUPERFAMILY SSF51569 7 247 2.41E-81 T 22-04-2016 LK04_RS02260 01d62efbb1991dc2f602d540c4715522 259 PIRSF PIRSF001357 5 255 1.1E-78 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 LK04_RS02260 01d62efbb1991dc2f602d540c4715522 259 PANTHER PTHR10889 6 257 2.4E-116 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 LK04_RS02260 01d62efbb1991dc2f602d540c4715522 259 SMART SM01133 10 246 1.3E-82 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 LK04_RS02260 01d62efbb1991dc2f602d540c4715522 259 Pfam PF01791 DeoC/LacD family aldolase 11 244 5.2E-46 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 LK04_RS02260 01d62efbb1991dc2f602d540c4715522 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 53.293 T 22-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 LK04_RS02260 01d62efbb1991dc2f602d540c4715522 259 Gene3D G3DSA:3.20.20.70 3 252 7.4E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS02260 01d62efbb1991dc2f602d540c4715522 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 1.4E-80 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 LK04_RS09910 2001ead3129f3f35760471b9e36bd78d 152 ProDom PD033929 YBCN ECS1616 SIMILAR 5'REGION ORF151 RUSA LAMBDOID DLP12 BACTERIOPHAGE PROPHAGE 12 150 1.0E-41 T 22-04-2016 LK04_RS09910 2001ead3129f3f35760471b9e36bd78d 152 Gene3D G3DSA:1.10.3790.10 30 144 5.0E-8 T 22-04-2016 IPR008711 Recombinase NinB LK04_RS09910 2001ead3129f3f35760471b9e36bd78d 152 SUPERFAMILY SSF103370 41 136 5.36E-5 T 22-04-2016 IPR008711 Recombinase NinB LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SUPERFAMILY SSF50249 255 364 5.93E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PANTHER PTHR10724 1 514 1.1E-280 T 22-04-2016 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Gene3D G3DSA:2.40.50.140 360 439 2.9E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SUPERFAMILY SSF50249 1 112 3.26E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.5E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.5E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.5E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.5E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.5E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.5E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.5E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.5E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.5E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Gene3D G3DSA:2.40.50.140 102 172 1.4E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SUPERFAMILY SSF50249 429 533 3.5E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Gene3D G3DSA:2.40.50.140 449 531 4.0E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PANTHER PTHR10724:SF6 1 514 1.1E-280 T 22-04-2016 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SUPERFAMILY SSF50249 342 440 4.18E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Pfam PF00575 S1 RNA binding domain 20 78 8.5E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Pfam PF00575 S1 RNA binding domain 449 520 1.2E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Pfam PF00575 S1 RNA binding domain 103 171 3.9E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Pfam PF00575 S1 RNA binding domain 275 347 1.6E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Pfam PF00575 S1 RNA binding domain 361 434 4.0E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SUPERFAMILY SSF50249 103 185 1.72E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Gene3D G3DSA:2.40.50.140 279 359 3.1E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Gene3D G3DSA:2.40.50.140 192 278 7.6E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 Gene3D G3DSA:2.40.50.140 21 101 6.3E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 PIRSF PIRSF002111 1 534 1.6E-221 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SMART SM00316 190 260 2.8E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SMART SM00316 103 171 5.9E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SMART SM00316 275 347 1.1E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SMART SM00316 19 87 4.5E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SMART SM00316 362 434 1.4E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 SMART SM00316 449 520 1.1E-19 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS12070 fc3274f0bcc17f235efca2a25f1cc441 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 7.0E-239 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS05520 a2c9c5625e07f3bb4703838d73c661ef 325 PANTHER PTHR11432:SF8 1 321 1.4E-229 T 22-04-2016 LK04_RS05520 a2c9c5625e07f3bb4703838d73c661ef 325 Pfam PF00146 NADH dehydrogenase 17 316 4.2E-118 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 LK04_RS05520 a2c9c5625e07f3bb4703838d73c661ef 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.598 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 LK04_RS05520 a2c9c5625e07f3bb4703838d73c661ef 325 PANTHER PTHR11432 1 321 1.4E-229 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 LK04_RS05520 a2c9c5625e07f3bb4703838d73c661ef 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 LK04_RS05520 a2c9c5625e07f3bb4703838d73c661ef 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 Pfam PF13307 Helicase C-terminal domain 528 688 1.6E-25 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 Gene3D G3DSA:3.40.50.300 515 613 6.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 Gene3D G3DSA:3.40.50.300 647 671 6.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 Gene3D G3DSA:3.40.50.300 17 122 9.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 Gene3D G3DSA:3.40.50.300 211 293 9.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 Gene3D G3DSA:3.40.50.300 454 463 9.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 PANTHER PTHR11472 1 711 0.0 T 22-04-2016 LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 SMART SM00488 18 312 0.0054 T 22-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 Pfam PF00270 DEAD/DEAH box helicase 31 95 5.2E-5 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 SMART SM00491 545 677 3.4E-35 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 SUPERFAMILY SSF52540 199 270 2.25E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 SUPERFAMILY SSF52540 452 466 2.25E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 SUPERFAMILY SSF52540 501 670 2.25E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 SUPERFAMILY SSF52540 47 97 2.25E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 PANTHER PTHR11472:SF32 1 711 0.0 T 22-04-2016 LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 Pfam PF06733 DEAD_2 199 264 1.1E-6 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 LK04_RS12575 a1c5527d8d6b386e6245a296c99f7547 712 SMART SM00487 23 301 0.0012 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS17080 e89dde6bd0e224e364014ece88d004e6 469 Gene3D G3DSA:1.20.1250.20 81 233 3.1E-19 T 22-04-2016 LK04_RS17080 e89dde6bd0e224e364014ece88d004e6 469 Gene3D G3DSA:1.20.1250.20 282 463 1.5E-20 T 22-04-2016 LK04_RS17080 e89dde6bd0e224e364014ece88d004e6 469 Pfam PF00083 Sugar (and other) transporter 39 469 1.5E-34 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS17080 e89dde6bd0e224e364014ece88d004e6 469 SUPERFAMILY SSF103473 24 468 1.7E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS17080 e89dde6bd0e224e364014ece88d004e6 469 PANTHER PTHR24064:SF277 24 469 6.1E-183 T 22-04-2016 LK04_RS17080 e89dde6bd0e224e364014ece88d004e6 469 ProSitePatterns PS00216 Sugar transport proteins signature 1. 99 115 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS17080 e89dde6bd0e224e364014ece88d004e6 469 ProSitePatterns PS00217 Sugar transport proteins signature 2. 141 166 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS17080 e89dde6bd0e224e364014ece88d004e6 469 PANTHER PTHR24064 24 469 6.1E-183 T 22-04-2016 LK04_RS03005 112b28e101406e9877557593aa8549c8 327 PANTHER PTHR22602 1 318 1.8E-70 T 22-04-2016 LK04_RS03005 112b28e101406e9877557593aa8549c8 327 SUPERFAMILY SSF103025 1 242 6.59E-64 T 22-04-2016 LK04_RS03005 112b28e101406e9877557593aa8549c8 327 PANTHER PTHR22602:SF0 1 318 1.8E-70 T 22-04-2016 LK04_RS03005 112b28e101406e9877557593aa8549c8 327 SUPERFAMILY SSF101790 244 325 7.19E-25 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain LK04_RS03005 112b28e101406e9877557593aa8549c8 327 Gene3D G3DSA:3.30.70.1400 27 112 1.0E-31 T 22-04-2016 LK04_RS03005 112b28e101406e9877557593aa8549c8 327 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 252 4.8E-26 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site LK04_RS03005 112b28e101406e9877557593aa8549c8 327 Pfam PF01571 Aminomethyltransferase folate-binding domain 30 134 1.9E-8 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal LK04_RS03005 112b28e101406e9877557593aa8549c8 327 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 322 47.448 T 22-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 SUPERFAMILY SSF53756 892 1159 7.53E-9 T 22-04-2016 LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 SUPERFAMILY SSF53448 15 223 1.13E-11 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 Gene3D G3DSA:3.90.550.10 383 516 5.9E-8 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 Gene3D G3DSA:3.90.550.10 9 227 4.4E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 SUPERFAMILY SSF53448 550 777 3.47E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 SUPERFAMILY SSF53448 335 497 7.43E-7 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 PANTHER PTHR22916 717 770 2.5E-17 T 22-04-2016 LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 PANTHER PTHR22916 504 700 2.5E-17 T 22-04-2016 LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 Gene3D G3DSA:3.90.550.10 556 770 3.4E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 Pfam PF00535 Glycosyl transferase family 2 22 108 4.1E-5 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS07045 fc3007fffdabf8b9d0df287587bfe514 1173 Pfam PF00535 Glycosyl transferase family 2 570 738 1.7E-12 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS16495 1737fdbd0db87133d893eeff3b751d29 327 SUPERFAMILY SSF81345 2 322 3.14E-71 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS16495 1737fdbd0db87133d893eeff3b751d29 327 Gene3D G3DSA:1.10.3470.10 3 326 3.0E-88 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS16495 1737fdbd0db87133d893eeff3b751d29 327 Pfam PF01032 FecCD transport family 16 322 9.5E-82 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS16495 1737fdbd0db87133d893eeff3b751d29 327 PANTHER PTHR30472:SF24 1 327 6.4E-133 T 22-04-2016 LK04_RS16495 1737fdbd0db87133d893eeff3b751d29 327 PANTHER PTHR30472 1 327 6.4E-133 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS17960 25c368270f44e44d673716d773c5561f 503 Pfam PF02646 RmuC family 164 460 5.0E-103 T 22-04-2016 IPR003798 DNA recombination RmuC LK04_RS17960 25c368270f44e44d673716d773c5561f 503 PANTHER PTHR30563 5 492 1.5E-133 T 22-04-2016 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 46.925 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 Gene3D G3DSA:3.30.572.10 1 264 2.2E-137 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.21E-48 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.21E-48 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.21E-48 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.21E-48 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.21E-48 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 PANTHER PTHR11548 1 264 2.1E-202 T 22-04-2016 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 8.7E-96 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 4.4E-43 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 Pfam PF00303 Thymidylate synthase 2 264 2.4E-126 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS03215 87c18506b891723275ebecc3903a7558 264 SUPERFAMILY SSF55831 1 264 1.83E-133 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LK04_RS14690 4a91ffb856022b2e2008cb9dcce340a6 411 PANTHER PTHR21152 243 409 8.5E-87 T 22-04-2016 LK04_RS14690 4a91ffb856022b2e2008cb9dcce340a6 411 PANTHER PTHR21152 9 227 8.5E-87 T 22-04-2016 LK04_RS14690 4a91ffb856022b2e2008cb9dcce340a6 411 PIRSF PIRSF000524 8 410 5.2E-104 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 LK04_RS14690 4a91ffb856022b2e2008cb9dcce340a6 411 Gene3D G3DSA:3.40.640.10 25 284 4.2E-59 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS14690 4a91ffb856022b2e2008cb9dcce340a6 411 Gene3D G3DSA:3.90.1150.10 285 392 1.2E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS14690 4a91ffb856022b2e2008cb9dcce340a6 411 SUPERFAMILY SSF53383 7 391 4.31E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS14690 4a91ffb856022b2e2008cb9dcce340a6 411 Pfam PF00266 Aminotransferase class-V 16 359 7.2E-28 T 22-04-2016 IPR000192 Aminotransferase class V domain LK04_RS04165 f3aa7d98c88e6af523596412c23f3af2 280 PANTHER PTHR11364 1 280 1.2E-105 T 22-04-2016 LK04_RS04165 f3aa7d98c88e6af523596412c23f3af2 280 Gene3D G3DSA:3.40.250.10 2 151 5.2E-44 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04165 f3aa7d98c88e6af523596412c23f3af2 280 SMART SM00450 7 133 4.1E-20 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04165 f3aa7d98c88e6af523596412c23f3af2 280 SMART SM00450 156 276 5.8E-19 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04165 f3aa7d98c88e6af523596412c23f3af2 280 Gene3D G3DSA:3.40.250.10 159 280 7.6E-40 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04165 f3aa7d98c88e6af523596412c23f3af2 280 SUPERFAMILY SSF52821 166 279 2.75E-34 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04165 f3aa7d98c88e6af523596412c23f3af2 280 SUPERFAMILY SSF52821 3 151 3.14E-38 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04165 f3aa7d98c88e6af523596412c23f3af2 280 Pfam PF00581 Rhodanese-like domain 8 130 2.0E-14 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04165 f3aa7d98c88e6af523596412c23f3af2 280 Pfam PF00581 Rhodanese-like domain 166 271 6.2E-10 T 22-04-2016 IPR001763 Rhodanese-like domain LK04_RS04165 f3aa7d98c88e6af523596412c23f3af2 280 ProSitePatterns PS00683 Rhodanese C-terminal signature. 260 270 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 LK04_RS12655 ced2a5ba2169691ef42faad5f6e7754c 311 Gene3D G3DSA:3.10.580.10 270 307 1.2E-4 T 22-04-2016 LK04_RS12655 ced2a5ba2169691ef42faad5f6e7754c 311 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS12655 ced2a5ba2169691ef42faad5f6e7754c 311 SUPERFAMILY SSF52540 1 239 4.6E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12655 ced2a5ba2169691ef42faad5f6e7754c 311 SUPERFAMILY SSF54631 268 308 4.19E-6 T 22-04-2016 LK04_RS12655 ced2a5ba2169691ef42faad5f6e7754c 311 PANTHER PTHR24220:SF434 3 295 1.9E-151 T 22-04-2016 LK04_RS12655 ced2a5ba2169691ef42faad5f6e7754c 311 Pfam PF00005 ABC transporter 18 162 2.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12655 ced2a5ba2169691ef42faad5f6e7754c 311 PANTHER PTHR24220 3 295 1.9E-151 T 22-04-2016 LK04_RS12655 ced2a5ba2169691ef42faad5f6e7754c 311 Gene3D G3DSA:3.40.50.300 1 234 1.4E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12655 ced2a5ba2169691ef42faad5f6e7754c 311 Pfam PF00571 CBS domain 270 306 1.2E-4 T 22-04-2016 IPR000644 CBS domain LK04_RS12655 ced2a5ba2169691ef42faad5f6e7754c 311 SMART SM00382 26 212 1.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 PANTHER PTHR23501 3 482 1.4E-117 T 22-04-2016 LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 Pfam PF07690 Major Facilitator Superfamily 20 406 3.5E-51 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 SUPERFAMILY SSF103473 10 203 5.49E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 SUPERFAMILY SSF103473 455 483 5.49E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 SUPERFAMILY SSF103473 246 416 5.49E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 1.7E-5 T 22-04-2016 LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 1.7E-5 T 22-04-2016 LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 PRINTS PR01036 Tetracycline resistance protein TetB signature 77 99 1.7E-5 T 22-04-2016 LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 Gene3D G3DSA:1.20.1250.20 262 416 5.5E-17 T 22-04-2016 LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 Gene3D G3DSA:1.20.1250.20 456 484 5.5E-17 T 22-04-2016 LK04_RS08755 ebaf0069679fd553828f8d399532f49a 486 Gene3D G3DSA:1.20.1250.20 12 194 2.5E-35 T 22-04-2016 LK04_RS17055 616605a29387f945201b64775286da67 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 135 1.3E-7 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LK04_RS17055 616605a29387f945201b64775286da67 143 Gene3D G3DSA:3.10.180.10 8 139 1.5E-40 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS17055 616605a29387f945201b64775286da67 143 SUPERFAMILY SSF54593 1 140 2.14E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS17055 616605a29387f945201b64775286da67 143 PANTHER PTHR33990 1 137 4.8E-42 T 22-04-2016 LK04_RS17055 616605a29387f945201b64775286da67 143 PANTHER PTHR33990:SF1 1 137 4.8E-42 T 22-04-2016 LK04_RS02105 0ba59c1e4e23fe6de44b862f06749bec 396 PANTHER PTHR11808 4 396 2.2E-258 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS02105 0ba59c1e4e23fe6de44b862f06749bec 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 2.7E-112 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS02105 0ba59c1e4e23fe6de44b862f06749bec 396 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS02105 0ba59c1e4e23fe6de44b862f06749bec 396 Gene3D G3DSA:3.90.1150.10 259 394 1.3E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS02105 0ba59c1e4e23fe6de44b862f06749bec 396 PANTHER PTHR11808:SF45 4 396 2.2E-258 T 22-04-2016 LK04_RS02105 0ba59c1e4e23fe6de44b862f06749bec 396 Gene3D G3DSA:3.40.640.10 6 258 5.2E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS02105 0ba59c1e4e23fe6de44b862f06749bec 396 SUPERFAMILY SSF53383 23 392 1.1E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS02105 0ba59c1e4e23fe6de44b862f06749bec 396 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 1.6E-168 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 LK04_RS02105 0ba59c1e4e23fe6de44b862f06749bec 396 PIRSF PIRSF001434 1 395 1.4E-116 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LK04_RS15170 b8f91ef93377ea43cacc1ce2e99cd1ce 287 Gene3D G3DSA:2.30.140.10 6 56 1.8E-18 T 22-04-2016 LK04_RS15170 b8f91ef93377ea43cacc1ce2e99cd1ce 287 SUPERFAMILY SSF53335 6 283 8.02E-90 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS15170 b8f91ef93377ea43cacc1ce2e99cd1ce 287 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 LK04_RS15170 b8f91ef93377ea43cacc1ce2e99cd1ce 287 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.256 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 LK04_RS15170 b8f91ef93377ea43cacc1ce2e99cd1ce 287 PANTHER PTHR11558 1 284 8.2E-122 T 22-04-2016 LK04_RS15170 b8f91ef93377ea43cacc1ce2e99cd1ce 287 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 3.1E-116 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 LK04_RS15170 b8f91ef93377ea43cacc1ce2e99cd1ce 287 Pfam PF01564 Spermine/spermidine synthase 7 239 9.1E-87 T 22-04-2016 LK04_RS15170 b8f91ef93377ea43cacc1ce2e99cd1ce 287 Gene3D G3DSA:3.40.50.150 57 283 1.9E-82 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS17245 1cc5dd26d98f181d90643e25e21e67d3 131 Pfam PF01527 Transposase 2 70 3.5E-18 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 LK04_RS17245 1cc5dd26d98f181d90643e25e21e67d3 131 PANTHER PTHR33609 2 113 3.9E-20 T 22-04-2016 LK04_RS17245 1cc5dd26d98f181d90643e25e21e67d3 131 SUPERFAMILY SSF46689 1 73 1.97E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS17245 1cc5dd26d98f181d90643e25e21e67d3 131 Gene3D G3DSA:1.10.10.60 7 85 3.7E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS07220 5a7842199e5926830482795abcd1014a 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.483 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 LK04_RS07220 5a7842199e5926830482795abcd1014a 360 Gene3D G3DSA:1.20.58.410 6 93 3.5E-19 T 22-04-2016 LK04_RS07220 5a7842199e5926830482795abcd1014a 360 Pfam PF00472 RF-1 domain 216 321 2.4E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LK04_RS07220 5a7842199e5926830482795abcd1014a 360 Gene3D G3DSA:3.30.160.20 214 288 1.6E-34 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LK04_RS07220 5a7842199e5926830482795abcd1014a 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LK04_RS07220 5a7842199e5926830482795abcd1014a 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 357 6.5E-171 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 LK04_RS07220 5a7842199e5926830482795abcd1014a 360 SUPERFAMILY SSF75620 12 353 1.2E-134 T 22-04-2016 LK04_RS07220 5a7842199e5926830482795abcd1014a 360 PANTHER PTHR11075 1 356 4.0E-174 T 22-04-2016 LK04_RS07220 5a7842199e5926830482795abcd1014a 360 PANTHER PTHR11075:SF9 1 356 4.0E-174 T 22-04-2016 LK04_RS07220 5a7842199e5926830482795abcd1014a 360 Pfam PF03462 PCRF domain 12 203 1.3E-74 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LK04_RS07220 5a7842199e5926830482795abcd1014a 360 SMART SM00937 63 178 2.6E-69 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LK04_RS19565 bbd6a1ddbfd6e5e7fe485818bd0f0889 248 PANTHER PTHR19370:SF98 4 232 3.1E-104 T 22-04-2016 LK04_RS19565 bbd6a1ddbfd6e5e7fe485818bd0f0889 248 SUPERFAMILY SSF52343 103 248 2.1E-37 T 22-04-2016 LK04_RS19565 bbd6a1ddbfd6e5e7fe485818bd0f0889 248 SUPERFAMILY SSF63380 3 99 1.34E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LK04_RS19565 bbd6a1ddbfd6e5e7fe485818bd0f0889 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 1.3E-17 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LK04_RS19565 bbd6a1ddbfd6e5e7fe485818bd0f0889 248 Gene3D G3DSA:2.40.30.10 2 95 1.5E-30 T 22-04-2016 LK04_RS19565 bbd6a1ddbfd6e5e7fe485818bd0f0889 248 PANTHER PTHR19370 4 232 3.1E-104 T 22-04-2016 LK04_RS19565 bbd6a1ddbfd6e5e7fe485818bd0f0889 248 Pfam PF00970 Oxidoreductase FAD-binding domain 17 90 9.8E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain LK04_RS19565 bbd6a1ddbfd6e5e7fe485818bd0f0889 248 Gene3D G3DSA:3.40.50.80 96 248 2.2E-45 T 22-04-2016 LK04_RS09615 603edf9a116940839bb28bc3747b444d 391 PANTHER PTHR30199:SF0 9 390 5.1E-146 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 LK04_RS09615 603edf9a116940839bb28bc3747b444d 391 TIGRFAM TIGR00843 benE: benzoate transporter 9 385 3.2E-133 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 LK04_RS09615 603edf9a116940839bb28bc3747b444d 391 Pfam PF03594 Benzoate membrane transport protein 9 384 2.0E-133 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 LK04_RS09615 603edf9a116940839bb28bc3747b444d 391 PANTHER PTHR30199 9 390 5.1E-146 T 22-04-2016 LK04_RS03405 b2fad691781c73bfb916711abc994368 438 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 430 8.0E-138 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LK04_RS03405 b2fad691781c73bfb916711abc994368 438 Gene3D G3DSA:2.40.50.140 2 87 1.7E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS03405 b2fad691781c73bfb916711abc994368 438 PANTHER PTHR11061 1 437 2.2E-116 T 22-04-2016 LK04_RS03405 b2fad691781c73bfb916711abc994368 438 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 369 399 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site LK04_RS03405 b2fad691781c73bfb916711abc994368 438 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 265 437 9.6E-27 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LK04_RS03405 b2fad691781c73bfb916711abc994368 438 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 438 62.635 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LK04_RS03405 b2fad691781c73bfb916711abc994368 438 Pfam PF01938 TRAM domain 13 66 2.5E-12 T 22-04-2016 IPR002792 TRAM domain LK04_RS03405 b2fad691781c73bfb916711abc994368 438 Gene3D G3DSA:3.40.50.150 258 436 1.5E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS03405 b2fad691781c73bfb916711abc994368 438 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 420 430 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site LK04_RS03405 b2fad691781c73bfb916711abc994368 438 PANTHER PTHR11061:SF30 1 437 2.2E-116 T 22-04-2016 LK04_RS03405 b2fad691781c73bfb916711abc994368 438 SUPERFAMILY SSF50249 2 66 1.94E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS03405 b2fad691781c73bfb916711abc994368 438 SUPERFAMILY SSF53335 76 437 6.75E-82 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS13320 7d71e2e2f4faa743be867b65b7447fda 508 Gene3D G3DSA:3.60.110.10 218 488 3.2E-21 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS13320 7d71e2e2f4faa743be867b65b7447fda 508 PANTHER PTHR38686 2 508 6.8E-153 T 22-04-2016 LK04_RS13320 7d71e2e2f4faa743be867b65b7447fda 508 Pfam PF00795 Carbon-nitrogen hydrolase 224 482 4.9E-37 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS13320 7d71e2e2f4faa743be867b65b7447fda 508 SUPERFAMILY SSF56317 215 490 3.92E-37 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS13320 7d71e2e2f4faa743be867b65b7447fda 508 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 23.891 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 LK04_RS13320 7d71e2e2f4faa743be867b65b7447fda 508 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 2.6E-109 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 LK04_RS10470 73ec39b34cb6ab03e04e67992e47fff1 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 4.0E-31 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 LK04_RS10470 73ec39b34cb6ab03e04e67992e47fff1 183 Gene3D G3DSA:3.30.110.10 87 182 5.4E-38 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 LK04_RS10470 73ec39b34cb6ab03e04e67992e47fff1 183 SUPERFAMILY SSF54364 13 86 6.28E-29 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 LK04_RS10470 73ec39b34cb6ab03e04e67992e47fff1 183 SUPERFAMILY SSF55200 90 182 6.54E-32 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 LK04_RS10470 73ec39b34cb6ab03e04e67992e47fff1 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 182 9.7E-74 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 LK04_RS10470 73ec39b34cb6ab03e04e67992e47fff1 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 182 30.494 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 LK04_RS10470 73ec39b34cb6ab03e04e67992e47fff1 183 PANTHER PTHR10938 13 183 6.5E-68 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 LK04_RS10470 73ec39b34cb6ab03e04e67992e47fff1 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 180 1.0E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 LK04_RS10470 73ec39b34cb6ab03e04e67992e47fff1 183 Gene3D G3DSA:3.10.20.80 13 86 1.9E-35 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 LK04_RS10470 73ec39b34cb6ab03e04e67992e47fff1 183 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 LK04_RS12480 b6f519ec64cccd3f630499da17231bfe 219 SUPERFAMILY SSF161098 13 202 1.83E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12480 b6f519ec64cccd3f630499da17231bfe 219 PANTHER PTHR30614:SF13 1 219 9.1E-163 T 22-04-2016 LK04_RS12480 b6f519ec64cccd3f630499da17231bfe 219 Gene3D G3DSA:1.10.3720.10 13 217 9.2E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12480 b6f519ec64cccd3f630499da17231bfe 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 2.8E-30 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS12480 b6f519ec64cccd3f630499da17231bfe 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 8.8E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12480 b6f519ec64cccd3f630499da17231bfe 219 PANTHER PTHR30614 1 219 9.1E-163 T 22-04-2016 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 SUPERFAMILY SSF51984 20 106 2.75E-29 T 22-04-2016 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 Gene3D G3DSA:3.40.1190.10 108 325 4.9E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 PANTHER PTHR23135 14 469 4.9E-226 T 22-04-2016 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 Gene3D G3DSA:3.90.190.20 326 477 1.3E-55 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 418 5.6E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 2.0E-29 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 Gene3D G3DSA:3.40.50.720 20 107 5.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 1.8E-182 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 SUPERFAMILY SSF53244 323 477 1.54E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 Pfam PF08245 Mur ligase middle domain 124 304 1.4E-27 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 PANTHER PTHR23135:SF5 14 469 4.9E-226 T 22-04-2016 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.15 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15400 37f7d63f0794cf47e4c6c82e6f0ab828 491 SUPERFAMILY SSF53623 105 322 3.14E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS18555 bcc3a47d68c0b56f8800c4c7eb92b14e 95 PANTHER PTHR36582 1 94 5.9E-35 T 22-04-2016 LK04_RS18555 bcc3a47d68c0b56f8800c4c7eb92b14e 95 Gene3D G3DSA:1.10.1220.10 5 38 5.0E-4 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LK04_RS18555 bcc3a47d68c0b56f8800c4c7eb92b14e 95 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 1.3E-17 T 22-04-2016 IPR022789 Antitoxin ParD LK04_RS18555 bcc3a47d68c0b56f8800c4c7eb92b14e 95 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 74 5.5E-25 T 22-04-2016 IPR022789 Antitoxin ParD LK04_RS18555 bcc3a47d68c0b56f8800c4c7eb92b14e 95 SUPERFAMILY SSF47598 4 44 1.78E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LK04_RS18555 bcc3a47d68c0b56f8800c4c7eb92b14e 95 PANTHER PTHR36582:SF2 1 94 5.9E-35 T 22-04-2016 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 SUPERFAMILY SSF103473 244 455 1.83E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 SUPERFAMILY SSF103473 7 194 1.83E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 Gene3D G3DSA:1.20.1250.20 10 190 1.7E-33 T 22-04-2016 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 2.2E-8 T 22-04-2016 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 2.2E-8 T 22-04-2016 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 2.2E-8 T 22-04-2016 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 2.2E-8 T 22-04-2016 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 2.2E-8 T 22-04-2016 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 Gene3D G3DSA:1.20.1250.20 255 458 6.0E-14 T 22-04-2016 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 464 42.312 T 22-04-2016 IPR023721 Multidrug resistance protein MdtD, putative LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 Pfam PF07690 Major Facilitator Superfamily 15 405 7.8E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 PANTHER PTHR23501:SF36 9 467 1.7E-289 T 22-04-2016 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 414 3.4E-70 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LK04_RS05990 c0101d37c0a76b867301afccae0a4d29 468 PANTHER PTHR23501 9 467 1.7E-289 T 22-04-2016 LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 PANTHER PTHR11938 1 189 5.3E-93 T 22-04-2016 LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 PANTHER PTHR11938:SF64 1 189 5.3E-93 T 22-04-2016 LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 SUPERFAMILY SSF54862 37 176 2.51E-28 T 22-04-2016 LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 Pfam PF14697 4Fe-4S dicluster domain 110 164 3.6E-17 T 22-04-2016 LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 Gene3D G3DSA:3.30.70.20 121 177 2.1E-16 T 22-04-2016 LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 191 1.8E-86 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 Pfam PF04060 Putative Fe-S cluster 44 76 1.2E-11 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 PIRSF PIRSF005784 3 191 2.3E-85 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.615 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 LK04_RS10120 26c77e736b424da33d859db95ef37e5a 192 Gene3D G3DSA:1.10.1060.10 92 120 6.5E-4 T 22-04-2016 LK04_RS05405 90e11b6e0bdbdb877eb99c8778d72453 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 221 5.0E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05405 90e11b6e0bdbdb877eb99c8778d72453 238 Gene3D G3DSA:1.10.3720.10 20 228 3.6E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05405 90e11b6e0bdbdb877eb99c8778d72453 238 PANTHER PTHR30450 1 237 2.8E-179 T 22-04-2016 LK04_RS05405 90e11b6e0bdbdb877eb99c8778d72453 238 PANTHER PTHR30450:SF5 1 237 2.8E-179 T 22-04-2016 LK04_RS05405 90e11b6e0bdbdb877eb99c8778d72453 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 2.4E-13 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS05405 90e11b6e0bdbdb877eb99c8778d72453 238 SUPERFAMILY SSF161098 17 220 3.27E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09040 4cf2f1a96432ba8810cf5af24690d39a 371 Gene3D G3DSA:2.130.10.10 23 368 4.0E-70 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LK04_RS09040 4cf2f1a96432ba8810cf5af24690d39a 371 Pfam PF10282 Lactonase, 7-bladed beta-propeller 28 367 3.2E-70 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 LK04_RS09040 4cf2f1a96432ba8810cf5af24690d39a 371 PANTHER PTHR30344 10 371 2.6E-59 T 22-04-2016 LK04_RS09040 4cf2f1a96432ba8810cf5af24690d39a 371 SUPERFAMILY SSF51004 23 363 1.1E-34 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain LK04_RS09040 4cf2f1a96432ba8810cf5af24690d39a 371 PANTHER PTHR30344:SF1 10 371 2.6E-59 T 22-04-2016 LK04_RS11270 2e0e3dd5783873ee3ba8a727ef3a23a4 263 Pfam PF01026 TatD related DNase 4 255 3.0E-74 T 22-04-2016 IPR001130 TatD family GO:0016788 LK04_RS11270 2e0e3dd5783873ee3ba8a727ef3a23a4 263 Gene3D G3DSA:3.20.20.140 2 256 8.5E-85 T 22-04-2016 LK04_RS11270 2e0e3dd5783873ee3ba8a727ef3a23a4 263 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 255 6.0E-91 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 LK04_RS11270 2e0e3dd5783873ee3ba8a727ef3a23a4 263 PANTHER PTHR10060 1 258 2.1E-130 T 22-04-2016 IPR001130 TatD family GO:0016788 LK04_RS11270 2e0e3dd5783873ee3ba8a727ef3a23a4 263 PIRSF PIRSF005902 1 259 3.9E-73 T 22-04-2016 IPR001130 TatD family GO:0016788 LK04_RS11270 2e0e3dd5783873ee3ba8a727ef3a23a4 263 PANTHER PTHR10060:SF20 1 258 2.1E-130 T 22-04-2016 LK04_RS11270 2e0e3dd5783873ee3ba8a727ef3a23a4 263 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LK04_RS11270 2e0e3dd5783873ee3ba8a727ef3a23a4 263 SUPERFAMILY SSF51556 1 258 2.92E-85 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS11270 2e0e3dd5783873ee3ba8a727ef3a23a4 263 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LK04_RS05660 e7950cf634989ca1cc12225bc5c3369e 247 Gene3D G3DSA:3.90.470.20 61 126 4.6E-6 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS05660 e7950cf634989ca1cc12225bc5c3369e 247 PRINTS PR01399 Enterobactin synthetase component D signature 89 107 1.6E-12 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 LK04_RS05660 e7950cf634989ca1cc12225bc5c3369e 247 PRINTS PR01399 Enterobactin synthetase component D signature 164 180 1.6E-12 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 LK04_RS05660 e7950cf634989ca1cc12225bc5c3369e 247 PRINTS PR01399 Enterobactin synthetase component D signature 59 79 1.6E-12 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 LK04_RS05660 e7950cf634989ca1cc12225bc5c3369e 247 PANTHER PTHR38096 1 242 3.1E-45 T 22-04-2016 LK04_RS05660 e7950cf634989ca1cc12225bc5c3369e 247 Gene3D G3DSA:3.90.470.20 127 203 5.0E-6 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS05660 e7950cf634989ca1cc12225bc5c3369e 247 SUPERFAMILY SSF56214 120 235 1.13E-14 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS05660 e7950cf634989ca1cc12225bc5c3369e 247 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 122 212 2.1E-11 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 2.1E-211 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 PANTHER PTHR30075 1 689 0.0 T 22-04-2016 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 3.8E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 3.8E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 3.8E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 3.8E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 3.8E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 Gene3D G3DSA:1.10.730.10 582 678 2.4E-4 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 SUPERFAMILY SSF109604 339 538 1.57E-17 T 22-04-2016 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.474 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18565 c6362454f0aca133a1e30fcc9840aac7 689 Pfam PF05746 DALR anticodon binding domain 582 679 1.7E-7 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LK04_RS13170 6abc6458bf300674ed8716891832690a 318 PANTHER PTHR30087:SF0 1 318 3.7E-134 T 22-04-2016 LK04_RS13170 6abc6458bf300674ed8716891832690a 318 PANTHER PTHR30087 1 318 3.7E-134 T 22-04-2016 LK04_RS13170 6abc6458bf300674ed8716891832690a 318 Pfam PF04463 Protein of unknown function (DUF523) 7 149 2.6E-38 T 22-04-2016 IPR007553 Domain of unknown function DUF523 LK04_RS13170 6abc6458bf300674ed8716891832690a 318 PIRSF PIRSF037004 1 318 1.5E-128 T 22-04-2016 IPR017087 Uncharacterised conserved protein UCP037004 LK04_RS13170 6abc6458bf300674ed8716891832690a 318 Pfam PF08349 Protein of unknown function (DUF1722) 192 309 2.4E-41 T 22-04-2016 IPR013560 Domain of unknown function DUF1722 LK04_RS06075 c57d7173977353aa933c945dab4a8c5e 305 SUPERFAMILY SSF53448 6 233 1.59E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06075 c57d7173977353aa933c945dab4a8c5e 305 PANTHER PTHR22916 1 214 1.6E-37 T 22-04-2016 LK04_RS06075 c57d7173977353aa933c945dab4a8c5e 305 Gene3D G3DSA:3.90.550.10 5 226 2.1E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06075 c57d7173977353aa933c945dab4a8c5e 305 Pfam PF00535 Glycosyl transferase family 2 7 117 1.0E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS07275 1965c9902253eeeec6c5e4976aa1eae9 232 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 8 141 4.0E-33 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 LK04_RS07275 1965c9902253eeeec6c5e4976aa1eae9 232 PIRSF PIRSF029287 1 221 4.3E-45 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 LK04_RS07275 1965c9902253eeeec6c5e4976aa1eae9 232 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 8 141 7.6E-44 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 LK04_RS07275 1965c9902253eeeec6c5e4976aa1eae9 232 Gene3D G3DSA:3.40.1730.10 6 225 4.3E-67 T 22-04-2016 LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 PANTHER PTHR32303:SF4 580 794 3.2E-294 T 22-04-2016 LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 PANTHER PTHR32303:SF4 131 511 3.2E-294 T 22-04-2016 LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 407 428 - T 22-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 PANTHER PTHR32303 580 794 3.2E-294 T 22-04-2016 LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 PANTHER PTHR32303 131 511 3.2E-294 T 22-04-2016 LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 SUPERFAMILY SSF50998 561 793 1.16E-160 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 SUPERFAMILY SSF50998 166 525 1.16E-160 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 SMART SM00564 342 383 0.044 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 SMART SM00564 285 317 56.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 SMART SM00564 222 253 0.0081 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 SMART SM00564 716 749 3.2E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 SMART SM00564 404 461 61.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 Pfam PF01011 PQQ enzyme repeat 357 390 5.0E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 Pfam PF01011 PQQ enzyme repeat 292 321 5.2E-5 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 Pfam PF01011 PQQ enzyme repeat 227 262 2.4E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 Pfam PF01011 PQQ enzyme repeat 669 702 8.3E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 Pfam PF01011 PQQ enzyme repeat 725 759 2.8E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 Pfam PF01011 PQQ enzyme repeat 445 471 2.6E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 Gene3D G3DSA:2.140.10.10 572 794 5.8E-167 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 Gene3D G3DSA:2.140.10.10 163 537 5.8E-167 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LK04_RS17020 51c18a1e919f9d16c3ccee6e756ad829 796 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 14 793 0.0 T 22-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 LK04_RS10700 518cd27d4bc24cefa68bf43e43595aed 478 PANTHER PTHR10788 1 456 4.2E-182 T 22-04-2016 LK04_RS10700 518cd27d4bc24cefa68bf43e43595aed 478 Gene3D G3DSA:3.40.50.2000 247 440 5.7E-73 T 22-04-2016 LK04_RS10700 518cd27d4bc24cefa68bf43e43595aed 478 Pfam PF00982 Glycosyltransferase family 20 18 456 1.3E-140 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 LK04_RS10700 518cd27d4bc24cefa68bf43e43595aed 478 Gene3D G3DSA:3.40.50.2000 1 244 4.5E-75 T 22-04-2016 LK04_RS10700 518cd27d4bc24cefa68bf43e43595aed 478 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 456 1.2E-177 T 22-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 LK04_RS10700 518cd27d4bc24cefa68bf43e43595aed 478 SUPERFAMILY SSF53756 2 458 2.76E-146 T 22-04-2016 LK04_RS10700 518cd27d4bc24cefa68bf43e43595aed 478 PANTHER PTHR10788:SF6 1 456 4.2E-182 T 22-04-2016 LK04_RS19455 54b1b695832825068adc227f3f158a3e 310 SUPERFAMILY SSF51735 1 306 9.86E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19455 54b1b695832825068adc227f3f158a3e 310 Gene3D G3DSA:3.90.25.10 172 290 4.2E-35 T 22-04-2016 LK04_RS19455 54b1b695832825068adc227f3f158a3e 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 3.5E-44 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LK04_RS19455 54b1b695832825068adc227f3f158a3e 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 2.9E-134 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 LK04_RS19455 54b1b695832825068adc227f3f158a3e 310 Gene3D G3DSA:3.40.50.720 2 171 1.1E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19455 54b1b695832825068adc227f3f158a3e 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 57.869 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 LK04_RS19455 54b1b695832825068adc227f3f158a3e 310 PANTHER PTHR10366 1 308 1.5E-120 T 22-04-2016 LK04_RS19455 54b1b695832825068adc227f3f158a3e 310 PANTHER PTHR10366:SF469 1 308 1.5E-120 T 22-04-2016 LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 PANTHER PTHR32039 1 503 2.4E-253 T 22-04-2016 LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 208 223 1.2E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 1.2E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 1.2E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 389 6.4E-92 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 492 1.8E-27 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 5.1E-44 T 22-04-2016 LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 PANTHER PTHR32039:SF7 1 503 2.4E-253 T 22-04-2016 IPR004482 Mg chelatase-related protein LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 SUPERFAMILY SSF52540 187 499 7.36E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 2.4E-217 T 22-04-2016 IPR004482 Mg chelatase-related protein LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 Gene3D G3DSA:3.30.230.10 6 150 5.1E-24 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 SUPERFAMILY SSF54211 9 169 1.25E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 Gene3D G3DSA:3.40.50.300 188 384 3.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19765 e85dc89661844ea3013ec35f351d4a69 506 SMART SM00382 209 389 1.7E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 PANTHER PTHR30537 3 299 1.7E-84 T 22-04-2016 LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 Gene3D G3DSA:3.40.190.10 98 184 1.1E-20 T 22-04-2016 LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 Gene3D G3DSA:3.40.190.10 185 266 6.2E-10 T 22-04-2016 LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 Pfam PF03466 LysR substrate binding domain 95 298 9.6E-37 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 Gene3D G3DSA:1.10.10.10 10 91 2.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 SUPERFAMILY SSF46785 9 116 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 SUPERFAMILY SSF53850 94 302 5.79E-39 T 22-04-2016 LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00225 19855026defd50090e8e67aab901f5a9 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS12665 616833843470db235a3320778b358a2c 302 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 23 298 3.5E-60 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LK04_RS12665 616833843470db235a3320778b358a2c 302 SUPERFAMILY SSF53850 23 301 2.93E-60 T 22-04-2016 LK04_RS12665 616833843470db235a3320778b358a2c 302 Gene3D G3DSA:3.40.190.120 132 239 4.4E-27 T 22-04-2016 LK04_RS12665 616833843470db235a3320778b358a2c 302 PANTHER PTHR30177 24 302 3.6E-135 T 22-04-2016 LK04_RS12665 616833843470db235a3320778b358a2c 302 Gene3D G3DSA:3.40.190.10 20 131 4.3E-58 T 22-04-2016 LK04_RS12665 616833843470db235a3320778b358a2c 302 Gene3D G3DSA:3.40.190.10 252 302 4.3E-58 T 22-04-2016 LK04_RS12665 616833843470db235a3320778b358a2c 302 PANTHER PTHR30177:SF12 24 302 3.6E-135 T 22-04-2016 LK04_RS08570 ecd92731601e9c4bfe5e54e491ee4c4c 188 PANTHER PTHR35562:SF2 1 180 3.9E-66 T 22-04-2016 LK04_RS08570 ecd92731601e9c4bfe5e54e491ee4c4c 188 SMART SM00463 86 170 4.0E-12 T 22-04-2016 IPR002625 Smr domain LK04_RS08570 ecd92731601e9c4bfe5e54e491ee4c4c 188 Pfam PF01713 Smr domain 90 170 4.1E-17 T 22-04-2016 IPR002625 Smr domain LK04_RS08570 ecd92731601e9c4bfe5e54e491ee4c4c 188 PANTHER PTHR35562 1 180 3.9E-66 T 22-04-2016 LK04_RS08570 ecd92731601e9c4bfe5e54e491ee4c4c 188 SUPERFAMILY SSF160443 88 169 1.03E-9 T 22-04-2016 IPR002625 Smr domain LK04_RS12020 de0a2fa94dcd2b8edb11af5a021ac346 257 PANTHER PTHR10108:SF919 1 204 3.2E-38 T 22-04-2016 LK04_RS12020 de0a2fa94dcd2b8edb11af5a021ac346 257 Pfam PF08241 Methyltransferase domain 49 146 2.8E-17 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LK04_RS12020 de0a2fa94dcd2b8edb11af5a021ac346 257 SUPERFAMILY SSF53335 4 256 7.06E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS12020 de0a2fa94dcd2b8edb11af5a021ac346 257 Gene3D G3DSA:3.40.50.150 31 256 3.4E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS12020 de0a2fa94dcd2b8edb11af5a021ac346 257 PANTHER PTHR10108 1 204 3.2E-38 T 22-04-2016 LK04_RS12980 8d97522551eaba6af1b7f0366f431da2 322 Gene3D G3DSA:1.20.1510.10 13 209 1.0E-65 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain LK04_RS12980 8d97522551eaba6af1b7f0366f431da2 322 Pfam PF01545 Cation efflux family 19 209 9.0E-51 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LK04_RS12980 8d97522551eaba6af1b7f0366f431da2 322 SUPERFAMILY SSF161111 10 210 4.71E-60 T 22-04-2016 LK04_RS12980 8d97522551eaba6af1b7f0366f431da2 322 PANTHER PTHR11562 3 297 5.0E-112 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LK04_RS12980 8d97522551eaba6af1b7f0366f431da2 322 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 289 6.1E-95 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LK04_RS12980 8d97522551eaba6af1b7f0366f431da2 322 PANTHER PTHR11562:SF17 3 297 5.0E-112 T 22-04-2016 LK04_RS12980 8d97522551eaba6af1b7f0366f431da2 322 SUPERFAMILY SSF160240 223 287 3.27E-8 T 22-04-2016 LK04_RS10875 ced8e39984d87e2e14cb51f781efbbc1 167 SUPERFAMILY SSF52540 10 137 3.33E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10875 ced8e39984d87e2e14cb51f781efbbc1 167 Pfam PF13671 AAA domain 13 154 6.7E-27 T 22-04-2016 LK04_RS10875 ced8e39984d87e2e14cb51f781efbbc1 167 Gene3D G3DSA:3.40.50.300 13 136 1.1E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16920 0ac1e62a16933513feb7a4e6c8f8bddc 304 Gene3D G3DSA:3.40.50.2300 24 140 4.2E-29 T 22-04-2016 LK04_RS16920 0ac1e62a16933513feb7a4e6c8f8bddc 304 Gene3D G3DSA:3.40.50.2300 141 301 7.1E-49 T 22-04-2016 LK04_RS16920 0ac1e62a16933513feb7a4e6c8f8bddc 304 PANTHER PTHR32196:SF9 21 293 1.3E-43 T 22-04-2016 LK04_RS16920 0ac1e62a16933513feb7a4e6c8f8bddc 304 Pfam PF13407 Periplasmic binding protein domain 26 281 5.5E-59 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS16920 0ac1e62a16933513feb7a4e6c8f8bddc 304 PANTHER PTHR32196 21 293 1.3E-43 T 22-04-2016 LK04_RS16920 0ac1e62a16933513feb7a4e6c8f8bddc 304 SUPERFAMILY SSF53822 22 301 1.66E-75 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 314 385 4.7E-16 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 104 307 1.4E-21 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 30 72 3.9E-4 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 Gene3D G3DSA:2.40.50.140 312 381 3.4E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 SUPERFAMILY SSF50249 310 390 9.42E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 PANTHER PTHR23389 17 521 3.5E-171 T 22-04-2016 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 Gene3D G3DSA:1.10.150.20 484 557 3.6E-5 T 22-04-2016 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 PANTHER PTHR23389:SF7 17 521 3.5E-171 T 22-04-2016 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 SUPERFAMILY SSF47781 395 557 3.11E-23 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 Gene3D G3DSA:1.10.287.610 30 70 3.0E-8 T 22-04-2016 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 Gene3D G3DSA:3.30.470.30 129 245 3.5E-20 T 22-04-2016 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 SUPERFAMILY SSF56091 25 306 3.84E-62 T 22-04-2016 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 SMART SM00532 29 427 1.3E-55 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 Gene3D G3DSA:1.10.150.20 414 476 9.9E-4 T 22-04-2016 LK04_RS19285 fa003e64ffa13476e9bc4ef06be8c152 580 Hamap MF_01587 DNA ligase B [ligB]. 3 566 51.5 T 22-04-2016 IPR020923 DNA ligase B GO:0003911|GO:0006259 LK04_RS03495 3b55e645ec8bc63b7426d3052af9d116 105 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.775 T 22-04-2016 IPR023081 Cell division protein FtsB LK04_RS03495 3b55e645ec8bc63b7426d3052af9d116 105 PANTHER PTHR37485 2 104 1.7E-50 T 22-04-2016 LK04_RS03495 3b55e645ec8bc63b7426d3052af9d116 105 Pfam PF04977 Septum formation initiator 11 88 2.5E-31 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 LK04_RS03495 3b55e645ec8bc63b7426d3052af9d116 105 PANTHER PTHR37485:SF1 2 104 1.7E-50 T 22-04-2016 LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 Pfam PF07729 FCD domain 106 230 1.0E-21 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 36 95 3.1E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 SUPERFAMILY SSF46785 28 122 1.25E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 Gene3D G3DSA:1.10.10.10 20 95 1.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 SMART SM00895 106 231 5.1E-14 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 70 4.5E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 70 86 4.5E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 SMART SM00345 38 96 3.8E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 SUPERFAMILY SSF48008 103 230 1.88E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 PANTHER PTHR11751 53 122 7.5E-20 T 22-04-2016 LK04_RS18610 c2457797588157902c0fc0e7ea23840b 253 Gene3D G3DSA:1.20.120.530 100 231 1.6E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS13575 12c8caace31448f5503cc0d1e55f4148 587 Pfam PF12146 Serine aminopeptidase, S33 32 268 3.5E-65 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 LK04_RS13575 12c8caace31448f5503cc0d1e55f4148 587 PANTHER PTHR11614 1 305 4.0E-204 T 22-04-2016 LK04_RS13575 12c8caace31448f5503cc0d1e55f4148 587 Gene3D G3DSA:3.40.50.150 376 567 1.2E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS13575 12c8caace31448f5503cc0d1e55f4148 587 Pfam PF12147 Putative methyltransferase 276 583 5.1E-143 T 22-04-2016 IPR022744 Methyltransferase domain, putative LK04_RS13575 12c8caace31448f5503cc0d1e55f4148 587 PANTHER PTHR11614:SF106 1 305 4.0E-204 T 22-04-2016 LK04_RS13575 12c8caace31448f5503cc0d1e55f4148 587 SUPERFAMILY SSF53335 392 573 6.14E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS13575 12c8caace31448f5503cc0d1e55f4148 587 Gene3D G3DSA:3.40.50.1820 17 283 7.6E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS13575 12c8caace31448f5503cc0d1e55f4148 587 SUPERFAMILY SSF53474 8 282 1.77E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS13035 6ab9b7809495dd8953c39025df9cef08 428 TIGRFAM TIGR02794 tolA_full: protein TolA 12 238 3.4E-45 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 LK04_RS13035 6ab9b7809495dd8953c39025df9cef08 428 TIGRFAM TIGR02794 tolA_full: protein TolA 208 427 2.2E-51 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 LK04_RS13035 6ab9b7809495dd8953c39025df9cef08 428 SUPERFAMILY SSF74653 340 428 1.24E-20 T 22-04-2016 LK04_RS13035 6ab9b7809495dd8953c39025df9cef08 428 Gene3D G3DSA:3.30.1150.10 329 427 1.3E-42 T 22-04-2016 LK04_RS13035 6ab9b7809495dd8953c39025df9cef08 428 Pfam PF06519 TolA C-terminal 331 425 1.0E-35 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 LK04_RS13035 6ab9b7809495dd8953c39025df9cef08 428 PANTHER PTHR23242 2 319 3.1E-12 T 22-04-2016 LK04_RS19390 527e433349d66445e6c1224986f9ef24 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.9E-28 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19390 527e433349d66445e6c1224986f9ef24 55 Pfam PF00471 Ribosomal protein L33 7 53 8.7E-19 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19390 527e433349d66445e6c1224986f9ef24 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.857 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS19390 527e433349d66445e6c1224986f9ef24 55 PANTHER PTHR15238 1 55 1.5E-25 T 22-04-2016 LK04_RS19390 527e433349d66445e6c1224986f9ef24 55 SUPERFAMILY SSF57829 1 53 4.27E-20 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 LK04_RS19390 527e433349d66445e6c1224986f9ef24 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS02450 182ec5b97dd68fa2dc048bc48efe4ce0 160 Gene3D G3DSA:1.20.1290.10 46 155 1.5E-12 T 22-04-2016 IPR029032 AhpD-like LK04_RS02450 182ec5b97dd68fa2dc048bc48efe4ce0 160 SUPERFAMILY SSF69118 16 156 4.56E-16 T 22-04-2016 IPR029032 AhpD-like LK04_RS08960 400eff4f58d0e35aa83cea57311dc219 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 339 8.9E-51 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS08960 400eff4f58d0e35aa83cea57311dc219 351 PANTHER PTHR32196:SF21 20 351 8.9E-99 T 22-04-2016 LK04_RS08960 400eff4f58d0e35aa83cea57311dc219 351 PANTHER PTHR32196 20 351 8.9E-99 T 22-04-2016 LK04_RS00480 3b3a865c78ac26216186296d696a570c 337 SUPERFAMILY SSF55347 132 295 1.64E-15 T 22-04-2016 LK04_RS00480 3b3a865c78ac26216186296d696a570c 337 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 336 50.529 T 22-04-2016 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 LK04_RS00480 3b3a865c78ac26216186296d696a570c 337 Gene3D G3DSA:3.40.50.720 2 150 8.4E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00480 3b3a865c78ac26216186296d696a570c 337 Gene3D G3DSA:3.30.360.10 151 261 1.1E-40 T 22-04-2016 LK04_RS00480 3b3a865c78ac26216186296d696a570c 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 125 6.2E-28 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS00480 3b3a865c78ac26216186296d696a570c 337 PANTHER PTHR22604 3 336 2.6E-161 T 22-04-2016 LK04_RS00480 3b3a865c78ac26216186296d696a570c 337 PANTHER PTHR22604:SF103 3 336 2.6E-161 T 22-04-2016 LK04_RS00480 3b3a865c78ac26216186296d696a570c 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 2.1E-9 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS00480 3b3a865c78ac26216186296d696a570c 337 SUPERFAMILY SSF51735 3 154 1.61E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 PANTHER PTHR10724 1 744 0.0 T 22-04-2016 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 SUPERFAMILY SSF158832 4 321 9.29E-120 T 22-04-2016 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 SUPERFAMILY SSF47781 469 556 3.56E-28 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 Gene3D G3DSA:1.10.10.650 1 109 1.3E-46 T 22-04-2016 IPR023319 Tex-like protein, HTH domain LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 Gene3D G3DSA:1.10.3500.10 450 497 6.9E-104 T 22-04-2016 IPR023323 Tex-like domain LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 Gene3D G3DSA:1.10.3500.10 110 322 6.9E-104 T 22-04-2016 IPR023323 Tex-like domain LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 PANTHER PTHR10724:SF1 1 744 0.0 T 22-04-2016 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 SUPERFAMILY SSF47781 559 631 4.89E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 Pfam PF00575 S1 RNA binding domain 650 719 2.6E-23 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 SUPERFAMILY SSF50249 637 721 8.95E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 Gene3D G3DSA:1.10.150.310 498 629 3.7E-47 T 22-04-2016 IPR023097 Tex RuvX-like domain LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 Pfam PF09371 Tex-like protein N-terminal domain 9 193 4.9E-70 T 22-04-2016 IPR018974 Tex-like protein, N-terminal LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 SUPERFAMILY SSF53098 322 468 2.05E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 Gene3D G3DSA:3.30.420.140 327 449 1.4E-49 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 Gene3D G3DSA:2.40.50.140 632 719 9.1E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 SMART SM00316 648 719 1.0E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 Pfam PF12836 Helix-hairpin-helix motif 490 554 3.0E-28 T 22-04-2016 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 SMART SM00732 326 423 2.9E-37 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LK04_RS00550 d44c526193d98d7da503cb2850e55a5a 776 Pfam PF16921 Tex protein YqgF-like domain 327 450 5.8E-50 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain LK04_RS09625 a4b994a58d778dcc9540b6b12f4dec8f 990 SUPERFAMILY SSF53067 558 619 1.73E-5 T 22-04-2016 LK04_RS09625 a4b994a58d778dcc9540b6b12f4dec8f 990 SUPERFAMILY SSF53067 679 822 1.73E-5 T 22-04-2016 LK04_RS09625 a4b994a58d778dcc9540b6b12f4dec8f 990 Gene3D G3DSA:3.30.420.40 673 674 6.5E-4 T 22-04-2016 LK04_RS09625 a4b994a58d778dcc9540b6b12f4dec8f 990 Gene3D G3DSA:3.30.420.40 560 639 6.5E-4 T 22-04-2016 LK04_RS09625 a4b994a58d778dcc9540b6b12f4dec8f 990 Gene3D G3DSA:3.30.420.40 746 779 6.5E-4 T 22-04-2016 LK04_RS09625 a4b994a58d778dcc9540b6b12f4dec8f 990 Pfam PF07520 Virulence factor SrfB 1 987 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB LK04_RS09625 a4b994a58d778dcc9540b6b12f4dec8f 990 PIRSF PIRSF034585 1 990 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB LK04_RS08265 c7defd81c3341fbcfa951972cbe85610 197 PANTHER PTHR21327 1 194 1.8E-143 T 22-04-2016 LK04_RS08265 c7defd81c3341fbcfa951972cbe85610 197 Pfam PF00925 GTP cyclohydrolase II 4 170 1.0E-69 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LK04_RS08265 c7defd81c3341fbcfa951972cbe85610 197 SUPERFAMILY SSF142695 3 173 4.84E-68 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LK04_RS08265 c7defd81c3341fbcfa951972cbe85610 197 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 3.5E-94 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LK04_RS08265 c7defd81c3341fbcfa951972cbe85610 197 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.668 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LK04_RS08265 c7defd81c3341fbcfa951972cbe85610 197 PANTHER PTHR21327:SF14 1 194 1.8E-143 T 22-04-2016 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 Pfam PF01926 50S ribosome-binding GTPase 220 338 9.9E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 SUPERFAMILY SSF52540 74 154 1.78E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 SUPERFAMILY SSF52540 190 374 1.78E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 Gene3D G3DSA:3.30.1360.120 3 123 2.3E-42 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 456 33.206 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 13 456 2.0E-99 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 Pfam PF12631 MnmE helical domain 125 453 1.2E-58 T 22-04-2016 IPR025867 MnmE, helical domain LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 SUPERFAMILY SSF116878 381 456 5.75E-50 T 22-04-2016 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 SUPERFAMILY SSF116878 123 222 5.75E-50 T 22-04-2016 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 PANTHER PTHR11649 10 456 3.4E-175 T 22-04-2016 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 PANTHER PTHR11649:SF56 10 456 3.4E-175 T 22-04-2016 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 122 1.9E-35 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 Gene3D G3DSA:1.20.120.430 386 456 7.1E-58 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 Gene3D G3DSA:1.20.120.430 124 184 7.1E-58 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 Gene3D G3DSA:1.20.120.430 249 273 7.1E-58 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 Gene3D G3DSA:3.40.50.300 202 248 4.7E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 Gene3D G3DSA:3.40.50.300 288 377 3.4E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18745 0e945b33f8ac164d1a76b57c794ccc41 456 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 374 1.0E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS13040 e28802894d7eea106f7c84fcfe718ffd 142 PANTHER PTHR30558 1 141 2.7E-69 T 22-04-2016 LK04_RS13040 e28802894d7eea106f7c84fcfe718ffd 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 8.5E-39 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 LK04_RS13040 e28802894d7eea106f7c84fcfe718ffd 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 3.2E-24 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 LK04_RS13040 e28802894d7eea106f7c84fcfe718ffd 142 PANTHER PTHR30558:SF7 1 141 2.7E-69 T 22-04-2016 LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 Gene3D G3DSA:3.10.170.10 57 170 2.1E-47 T 22-04-2016 IPR013856 Peptidase M4 domain GO:0004222 LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 58 166 4.6E-33 T 22-04-2016 IPR013856 Peptidase M4 domain GO:0004222 LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 SUPERFAMILY SSF55486 57 336 3.85E-84 T 22-04-2016 LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 Pfam PF16485 Protealysin propeptide 3 42 6.6E-18 T 22-04-2016 IPR032475 Protealysin, N-terminal propeptide LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 Gene3D G3DSA:1.10.390.10 171 336 9.6E-48 T 22-04-2016 LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 PANTHER PTHR33794 52 337 1.1E-114 T 22-04-2016 LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 121 141 1.4E-29 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 259 275 1.4E-29 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 157 173 1.4E-29 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 178 189 1.4E-29 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 LK04_RS04240 aed781a2154851d7659d4dd25bf3b2ed 337 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 169 336 1.0E-46 T 22-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 7.3E-67 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 3.2E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 3.2E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 3.2E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 3.2E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 3.2E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.2E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 3.2E-85 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 Gene3D G3DSA:1.10.287.950 284 488 1.4E-63 T 22-04-2016 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 SUPERFAMILY SSF47170 25 174 2.62E-38 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 PANTHER PTHR32089:SF48 129 519 7.7E-212 T 22-04-2016 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 Pfam PF00672 HAMP domain 196 264 4.8E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 SMART SM00319 44 182 2.3E-26 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 Pfam PF02203 Tar ligand binding domain homologue 1 172 1.8E-43 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 SUPERFAMILY SSF58104 236 517 4.58E-76 T 22-04-2016 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 SMART SM00304 216 268 2.8E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 SMART SM00283 269 516 1.3E-95 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 Gene3D G3DSA:1.20.120.30 36 180 7.9E-46 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10655 27bbd3116daede7b19c2cdc7cbcf065a 559 PANTHER PTHR32089 129 519 7.7E-212 T 22-04-2016 LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 PANTHER PTHR30181 2 376 2.4E-173 T 22-04-2016 LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 SUPERFAMILY SSF55804 3 139 2.75E-38 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 325 340 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 PRINTS PR00107 Phosphocarrier protein signature 324 339 8.8E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 PRINTS PR00107 Phosphocarrier protein signature 339 356 8.8E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 PRINTS PR00107 Phosphocarrier protein signature 296 312 8.8E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 SUPERFAMILY SSF55804 148 275 7.15E-14 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 Gene3D G3DSA:3.30.1340.10 286 373 2.6E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 138 7.3E-29 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 6.5E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 Pfam PF00381 PTS HPr component phosphorylation site 287 368 1.2E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 Gene3D G3DSA:3.40.930.10 5 140 4.1E-39 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 PANTHER PTHR30181:SF3 2 376 2.4E-173 T 22-04-2016 LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 Gene3D G3DSA:3.40.930.10 149 280 1.1E-10 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 296 303 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LK04_RS05760 dcc7908c0c2493d503c189ea1bf2126a 376 SUPERFAMILY SSF55594 285 373 1.15E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS19110 49343a563ae34fbb6de6eb7093a2cc7b 323 PANTHER PTHR32196:SF21 9 323 2.4E-136 T 22-04-2016 LK04_RS19110 49343a563ae34fbb6de6eb7093a2cc7b 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 314 1.1E-51 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS19110 49343a563ae34fbb6de6eb7093a2cc7b 323 PANTHER PTHR32196 9 323 2.4E-136 T 22-04-2016 LK04_RS06030 e83d5a14015b4f97d8a6d8fcebe0b2aa 204 Gene3D G3DSA:1.20.144.10 73 146 7.6E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS06030 e83d5a14015b4f97d8a6d8fcebe0b2aa 204 Pfam PF01569 PAP2 superfamily 68 142 1.0E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS06030 e83d5a14015b4f97d8a6d8fcebe0b2aa 204 SUPERFAMILY SSF48317 3 148 8.76E-14 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS06030 e83d5a14015b4f97d8a6d8fcebe0b2aa 204 SMART SM00014 16 143 9.7E-6 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 Gene3D G3DSA:2.40.50.140 380 441 1.4E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 1.9E-109 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 PANTHER PTHR11918 1 441 3.0E-247 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 PANTHER PTHR11918:SF57 1 441 3.0E-247 T 22-04-2016 LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 63.351 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 Pfam PF04055 Radical SAM superfamily 146 323 9.3E-32 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 SMART SM00729 140 365 7.4E-56 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 SUPERFAMILY SSF102114 120 371 4.58E-55 T 22-04-2016 LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 2.1E-196 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 Gene3D G3DSA:3.80.30.20 138 377 8.7E-78 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe LK04_RS12345 176f6735a0b0c6baf22b90b4a251eced 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 90 1.5E-20 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 LK04_RS01290 a8120d03cc0a034d05dbce131061a4ce 182 Hamap MF_00045 Oligoribonuclease [orn]. 4 182 44.623 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 LK04_RS01290 a8120d03cc0a034d05dbce131061a4ce 182 SUPERFAMILY SSF53098 5 181 9.49E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS01290 a8120d03cc0a034d05dbce131061a4ce 182 SMART SM00479 8 181 4.1E-24 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LK04_RS01290 a8120d03cc0a034d05dbce131061a4ce 182 PANTHER PTHR11046:SF1 5 182 7.8E-124 T 22-04-2016 LK04_RS01290 a8120d03cc0a034d05dbce131061a4ce 182 Gene3D G3DSA:3.30.420.10 5 181 2.6E-70 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS01290 a8120d03cc0a034d05dbce131061a4ce 182 Pfam PF00929 Exonuclease 10 171 1.3E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LK04_RS01290 a8120d03cc0a034d05dbce131061a4ce 182 PANTHER PTHR11046 5 182 7.8E-124 T 22-04-2016 LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 Pfam PF00483 Nucleotidyl transferase 22 291 1.1E-66 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 51.906 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 PANTHER PTHR22572:SF10 21 398 9.0E-180 T 22-04-2016 LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 3.2E-154 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 PANTHER PTHR22572 21 398 9.0E-180 T 22-04-2016 LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 Gene3D G3DSA:3.90.550.10 21 301 4.0E-79 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 Gene3D G3DSA:3.90.550.10 344 386 4.0E-79 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 SUPERFAMILY SSF51161 313 410 1.8E-18 T 22-04-2016 IPR011004 Trimeric LpxA-like LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 SUPERFAMILY SSF53448 17 294 2.35E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 SUPERFAMILY SSF53448 344 359 2.35E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS17570 f5bda681d2f3445ccdd1f62e1bddb1a2 427 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 LK04_RS03460 40edb70e891dd915518e01cf13c00a22 94 Gene3D G3DSA:3.30.70.1060 2 84 6.5E-5 T 22-04-2016 LK04_RS03460 40edb70e891dd915518e01cf13c00a22 94 Pfam PF03795 YCII-related domain 1 79 9.2E-11 T 22-04-2016 IPR005545 YCII-related LK04_RS03460 40edb70e891dd915518e01cf13c00a22 94 PANTHER PTHR37828 1 94 9.0E-18 T 22-04-2016 LK04_RS03460 40edb70e891dd915518e01cf13c00a22 94 PANTHER PTHR37828:SF1 1 94 9.0E-18 T 22-04-2016 LK04_RS03460 40edb70e891dd915518e01cf13c00a22 94 SUPERFAMILY SSF54909 1 74 1.1E-10 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS11565 aad2b4ce4fb8023326499774cba39812 191 Pfam PF11659 Protein of unknown function (DUF3261) 11 161 3.6E-42 T 22-04-2016 IPR021675 Protein of unknown function DUF3261 LK04_RS07830 e12849ceb3036ab6d6370461d04aa2a1 454 Gene3D G3DSA:3.30.1330.90 10 158 4.2E-53 T 22-04-2016 IPR029009 Allosteric substrate binding domain LK04_RS07830 e12849ceb3036ab6d6370461d04aa2a1 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 3.3E-97 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit LK04_RS07830 e12849ceb3036ab6d6370461d04aa2a1 454 PANTHER PTHR30182:SF4 2 454 0.0 T 22-04-2016 LK04_RS07830 e12849ceb3036ab6d6370461d04aa2a1 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 2.4E-225 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 LK04_RS07830 e12849ceb3036ab6d6370461d04aa2a1 454 PANTHER PTHR30182 2 454 0.0 T 22-04-2016 LK04_RS07830 e12849ceb3036ab6d6370461d04aa2a1 454 Pfam PF03315 Serine dehydratase beta chain 3 155 1.2E-55 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 LK04_RS07830 e12849ceb3036ab6d6370461d04aa2a1 454 SUPERFAMILY SSF143548 16 158 5.49E-45 T 22-04-2016 IPR029009 Allosteric substrate binding domain LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 Gene3D G3DSA:3.50.50.60 455 468 1.7E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 Gene3D G3DSA:3.50.50.60 244 350 1.7E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 Gene3D G3DSA:3.50.50.60 513 580 1.7E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 Gene3D G3DSA:3.50.50.60 8 159 1.7E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 Pfam PF00732 GMC oxidoreductase 201 333 2.0E-7 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 Pfam PF05199 GMC oxidoreductase 445 572 2.0E-18 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 SUPERFAMILY SSF54373 418 492 6.67E-7 T 22-04-2016 LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 PANTHER PTHR11552 5 583 8.8E-117 T 22-04-2016 LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 PANTHER PTHR11552:SF139 5 583 8.8E-117 T 22-04-2016 LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 SUPERFAMILY SSF51905 522 582 7.13E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12445 6b2b2b9a3f038175a262007c581452fc 592 SUPERFAMILY SSF51905 8 342 7.13E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS18000 5733529930946d272924021fbe51ff07 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 1.3E-164 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS18000 5733529930946d272924021fbe51ff07 446 Pfam PF07690 Major Facilitator Superfamily 34 400 1.8E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS18000 5733529930946d272924021fbe51ff07 446 SUPERFAMILY SSF103473 11 441 1.96E-83 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS18000 5733529930946d272924021fbe51ff07 446 PIRSF PIRSF002808 5 446 5.1E-171 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS18000 5733529930946d272924021fbe51ff07 446 PANTHER PTHR11662 1 444 2.6E-237 T 22-04-2016 LK04_RS18000 5733529930946d272924021fbe51ff07 446 PANTHER PTHR11662:SF141 1 444 2.6E-237 T 22-04-2016 LK04_RS18000 5733529930946d272924021fbe51ff07 446 Gene3D G3DSA:1.20.1250.20 23 222 1.8E-51 T 22-04-2016 LK04_RS18000 5733529930946d272924021fbe51ff07 446 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 22-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 LK04_RS18000 5733529930946d272924021fbe51ff07 446 Gene3D G3DSA:1.20.1250.20 246 442 5.5E-46 T 22-04-2016 LK04_RS18000 5733529930946d272924021fbe51ff07 446 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 3.1E-259 T 22-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PANTHER PTHR32176 4 439 4.3E-257 T 22-04-2016 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 1.9E-215 T 22-04-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 SUPERFAMILY SSF51658 4 439 9.33E-171 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 52.669 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PRINTS PR00688 Xylose isomerase signature 271 298 8.0E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PRINTS PR00688 Xylose isomerase signature 156 175 8.0E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PRINTS PR00688 Xylose isomerase signature 180 201 8.0E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PRINTS PR00688 Xylose isomerase signature 229 253 8.0E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PRINTS PR00688 Xylose isomerase signature 300 311 8.0E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PRINTS PR00688 Xylose isomerase signature 333 344 8.0E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PRINTS PR00688 Xylose isomerase signature 92 114 8.0E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PRINTS PR00688 Xylose isomerase signature 207 226 8.0E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PRINTS PR00688 Xylose isomerase signature 133 153 8.0E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 PANTHER PTHR32176:SF0 4 439 4.3E-257 T 22-04-2016 LK04_RS18635 54b8f96826fb7490b39bd1cb917723d5 440 Gene3D G3DSA:3.20.20.150 3 439 2.2E-208 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS07495 29d679043655faa38fa843e2edadd585 76 SUPERFAMILY SSF46575 1 76 2.62E-34 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 LK04_RS07495 29d679043655faa38fa843e2edadd585 76 Pfam PF06440 DNA polymerase III, theta subunit 3 71 1.3E-38 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 LK04_RS07495 29d679043655faa38fa843e2edadd585 76 Gene3D G3DSA:1.10.1110.10 1 76 6.2E-44 T 22-04-2016 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS07495 29d679043655faa38fa843e2edadd585 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 9.0E-28 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 LK04_RS07325 adee24c8f04058d7067bf9f507dcd91c 269 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 102 135 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS07325 adee24c8f04058d7067bf9f507dcd91c 269 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 24 233 2.3E-48 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LK04_RS07325 adee24c8f04058d7067bf9f507dcd91c 269 Gene3D G3DSA:3.30.950.10 138 258 1.1E-43 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LK04_RS07325 adee24c8f04058d7067bf9f507dcd91c 269 PANTHER PTHR21091:SF16 18 254 2.6E-75 T 22-04-2016 LK04_RS07325 adee24c8f04058d7067bf9f507dcd91c 269 SUPERFAMILY SSF53790 19 260 2.88E-77 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LK04_RS07325 adee24c8f04058d7067bf9f507dcd91c 269 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 27 41 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS07325 adee24c8f04058d7067bf9f507dcd91c 269 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 22 256 1.5E-88 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LK04_RS07325 adee24c8f04058d7067bf9f507dcd91c 269 Gene3D G3DSA:3.40.1010.10 21 137 2.5E-43 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LK04_RS07325 adee24c8f04058d7067bf9f507dcd91c 269 PANTHER PTHR21091 18 254 2.6E-75 T 22-04-2016 LK04_RS17170 9a30abd7ebd65e7560f3583476c592ff 109 PANTHER PTHR38598 8 109 2.8E-46 T 22-04-2016 LK04_RS17170 9a30abd7ebd65e7560f3583476c592ff 109 Pfam PF04341 Protein of unknown function, DUF485 17 104 5.0E-36 T 22-04-2016 IPR007436 Protein of unknown function DUF485 LK04_RS04515 bceed56f1af9b2481b57a65595989668 192 Pfam PF00293 NUDIX domain 45 157 1.4E-10 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS04515 bceed56f1af9b2481b57a65595989668 192 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 5 185 8.8E-66 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 LK04_RS04515 bceed56f1af9b2481b57a65595989668 192 PANTHER PTHR11839 12 189 2.9E-39 T 22-04-2016 LK04_RS04515 bceed56f1af9b2481b57a65595989668 192 Gene3D G3DSA:3.90.79.10 5 185 3.2E-56 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS04515 bceed56f1af9b2481b57a65595989668 192 SUPERFAMILY SSF55811 11 186 1.9E-46 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 SUPERFAMILY SSF52440 1 103 1.73E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.215 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 Gene3D G3DSA:3.40.50.20 2 95 5.5E-38 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 PANTHER PTHR10520 1 426 5.4E-294 T 22-04-2016 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 SMART SM01210 330 423 5.8E-55 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 SUPERFAMILY SSF51246 329 423 3.77E-32 T 22-04-2016 IPR011054 Rudiment single hybrid motif LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 8.0E-29 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.5E-36 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 SMART SM01209 103 296 2.6E-138 T 22-04-2016 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.3E-187 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 Gene3D G3DSA:3.30.1490.20 121 190 7.2E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.5E-83 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 SUPERFAMILY SSF56059 104 324 8.31E-68 T 22-04-2016 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 Gene3D G3DSA:3.90.600.10 331 423 2.6E-35 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LK04_RS17715 b85bad5fc336012fcaee73a2fec54b23 426 Gene3D G3DSA:3.30.470.20 191 328 4.4E-65 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 PIRSF PIRSF000410 9 288 8.4E-100 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 80 6.4E-17 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 SUPERFAMILY SSF53335 95 284 3.31E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 Gene3D G3DSA:3.40.50.150 94 284 1.2E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 SMART SM00138 27 287 1.4E-116 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 PRINTS PR00996 Glutamate methyltransferase family signature 227 241 5.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 PRINTS PR00996 Glutamate methyltransferase family signature 49 62 5.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 PRINTS PR00996 Glutamate methyltransferase family signature 121 141 5.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 PRINTS PR00996 Glutamate methyltransferase family signature 246 269 5.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 5.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 PRINTS PR00996 Glutamate methyltransferase family signature 155 171 5.2E-46 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 280 9.8E-58 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 Gene3D G3DSA:1.10.155.10 17 93 7.3E-33 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 PANTHER PTHR24422 18 290 2.7E-149 T 22-04-2016 LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 SUPERFAMILY SSF47757 18 94 3.14E-24 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LK04_RS10650 b766a76b8cb08092b1bf1e2404226d60 291 PANTHER PTHR24422:SF13 18 290 2.7E-149 T 22-04-2016 LK04_RS12245 1d9617aa87e2077fe984d9c3000ceddb 378 SUPERFAMILY SSF53335 3 373 6.84E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS12245 1d9617aa87e2077fe984d9c3000ceddb 378 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 374 80.238 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 LK04_RS12245 1d9617aa87e2077fe984d9c3000ceddb 378 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 356 366 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site LK04_RS12245 1d9617aa87e2077fe984d9c3000ceddb 378 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 3 366 5.2E-58 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LK04_RS12245 1d9617aa87e2077fe984d9c3000ceddb 378 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 306 337 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site LK04_RS12245 1d9617aa87e2077fe984d9c3000ceddb 378 PANTHER PTHR11061:SF36 8 378 3.3E-242 T 22-04-2016 LK04_RS12245 1d9617aa87e2077fe984d9c3000ceddb 378 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 207 373 2.6E-18 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LK04_RS12245 1d9617aa87e2077fe984d9c3000ceddb 378 Gene3D G3DSA:3.40.50.150 180 371 2.8E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS12245 1d9617aa87e2077fe984d9c3000ceddb 378 PANTHER PTHR11061 8 378 3.3E-242 T 22-04-2016 LK04_RS12245 1d9617aa87e2077fe984d9c3000ceddb 378 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 2.5E-203 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 LK04_RS02160 7b5c55ae97f96b743e185cb2c28fd4fb 476 Pfam PF00155 Aminotransferase class I and II 146 460 1.2E-33 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS02160 7b5c55ae97f96b743e185cb2c28fd4fb 476 Gene3D G3DSA:3.90.1150.10 347 468 4.6E-7 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS02160 7b5c55ae97f96b743e185cb2c28fd4fb 476 PANTHER PTHR11751:SF314 85 467 5.4E-182 T 22-04-2016 LK04_RS02160 7b5c55ae97f96b743e185cb2c28fd4fb 476 SUPERFAMILY SSF46785 3 70 9.13E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02160 7b5c55ae97f96b743e185cb2c28fd4fb 476 SMART SM00345 7 66 1.6E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS02160 7b5c55ae97f96b743e185cb2c28fd4fb 476 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.7E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS02160 7b5c55ae97f96b743e185cb2c28fd4fb 476 Gene3D G3DSA:3.40.640.10 145 346 2.5E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS02160 7b5c55ae97f96b743e185cb2c28fd4fb 476 Gene3D G3DSA:1.10.10.10 2 67 8.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02160 7b5c55ae97f96b743e185cb2c28fd4fb 476 SUPERFAMILY SSF53383 90 468 2.96E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS02160 7b5c55ae97f96b743e185cb2c28fd4fb 476 PANTHER PTHR11751 85 467 5.4E-182 T 22-04-2016 LK04_RS06425 e2b93efd39166c630b0b0dd8964ee01b 264 SUPERFAMILY SSF53850 68 233 1.84E-16 T 22-04-2016 LK04_RS06425 e2b93efd39166c630b0b0dd8964ee01b 264 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 85 246 1.0E-19 T 22-04-2016 LK04_RS06425 e2b93efd39166c630b0b0dd8964ee01b 264 PANTHER PTHR35841 49 259 8.2E-34 T 22-04-2016 LK04_RS06425 e2b93efd39166c630b0b0dd8964ee01b 264 PANTHER PTHR35841:SF2 49 259 8.2E-34 T 22-04-2016 LK04_RS11415 50d7319a961f5362b857d2f51ecac92f 143 Gene3D G3DSA:1.20.58.300 1 119 2.1E-11 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LK04_RS11415 50d7319a961f5362b857d2f51ecac92f 143 SUPERFAMILY SSF140566 1 118 2.75E-17 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LK04_RS11415 50d7319a961f5362b857d2f51ecac92f 143 Pfam PF05130 FlgN protein 1 131 4.4E-20 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 SUPERFAMILY SSF46785 15 81 1.54E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 PANTHER PTHR11751:SF10 119 472 6.3E-105 T 22-04-2016 LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 Gene3D G3DSA:3.40.640.10 153 364 6.1E-56 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 3.0E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 PANTHER PTHR11751 119 472 6.3E-105 T 22-04-2016 LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 Pfam PF00155 Aminotransferase class I and II 148 464 4.0E-22 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 SUPERFAMILY SSF53383 115 473 4.72E-85 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 SMART SM00345 21 80 1.2E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 Gene3D G3DSA:1.10.10.10 17 81 6.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 7.3E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS05320 62133afcab23274a74dfdc72b5f2e80d 478 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 7.3E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS11480 944dacf272c55ab6edea5ec66559b867 190 PANTHER PTHR30529 1 183 1.0E-86 T 22-04-2016 LK04_RS11480 944dacf272c55ab6edea5ec66559b867 190 PANTHER PTHR30529:SF5 1 183 1.0E-86 T 22-04-2016 LK04_RS11480 944dacf272c55ab6edea5ec66559b867 190 Gene3D G3DSA:1.20.950.20 88 171 3.6E-6 T 22-04-2016 LK04_RS11480 944dacf272c55ab6edea5ec66559b867 190 SUPERFAMILY SSF81342 4 181 4.32E-38 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 LK04_RS11480 944dacf272c55ab6edea5ec66559b867 190 Pfam PF01292 Prokaryotic cytochrome b561 9 179 3.3E-29 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LK04_RS11910 bf0ee000f0c9ee34dc84be4dee998ab4 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 324 332 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LK04_RS11910 bf0ee000f0c9ee34dc84be4dee998ab4 369 Pfam PF03476 MOSC N-terminal beta barrel domain 1 115 4.4E-28 T 22-04-2016 IPR005303 MOSC, N-terminal beta barrel LK04_RS11910 bf0ee000f0c9ee34dc84be4dee998ab4 369 PANTHER PTHR14237 2 268 4.1E-86 T 22-04-2016 LK04_RS11910 bf0ee000f0c9ee34dc84be4dee998ab4 369 Gene3D G3DSA:3.10.20.30 282 368 5.6E-21 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS11910 bf0ee000f0c9ee34dc84be4dee998ab4 369 Pfam PF03473 MOSC domain 139 263 8.6E-30 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 LK04_RS11910 bf0ee000f0c9ee34dc84be4dee998ab4 369 SUPERFAMILY SSF54292 286 368 1.09E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LK04_RS11910 bf0ee000f0c9ee34dc84be4dee998ab4 369 SUPERFAMILY SSF50800 147 265 2.98E-18 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain LK04_RS11910 bf0ee000f0c9ee34dc84be4dee998ab4 369 SUPERFAMILY SSF50800 3 50 2.98E-18 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain LK04_RS11910 bf0ee000f0c9ee34dc84be4dee998ab4 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 303 362 5.9E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LK04_RS11910 bf0ee000f0c9ee34dc84be4dee998ab4 369 SUPERFAMILY SSF141673 4 130 4.97E-28 T 22-04-2016 LK04_RS17175 38cb77027cefaf10f58b542295d1dbe2 550 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 451 471 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LK04_RS17175 38cb77027cefaf10f58b542295d1dbe2 550 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 4 550 0.0 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 LK04_RS17175 38cb77027cefaf10f58b542295d1dbe2 550 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LK04_RS17175 38cb77027cefaf10f58b542295d1dbe2 550 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 550 53.307 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 LK04_RS17175 38cb77027cefaf10f58b542295d1dbe2 550 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 468 1.3E-62 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS17175 38cb77027cefaf10f58b542295d1dbe2 550 PANTHER PTHR11819 32 539 8.1E-287 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS17175 38cb77027cefaf10f58b542295d1dbe2 550 Pfam PF00474 Sodium:solute symporter family 63 469 1.0E-131 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS17175 38cb77027cefaf10f58b542295d1dbe2 550 PANTHER PTHR11819:SF13 32 539 8.1E-287 T 22-04-2016 LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PANTHER PTHR24322 12 138 4.2E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PANTHER PTHR24322 154 186 4.2E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 Pfam PF00106 short chain dehydrogenase 8 195 6.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PANTHER PTHR24322:SF25 12 138 4.2E-59 T 22-04-2016 LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PANTHER PTHR24322:SF25 154 186 4.2E-59 T 22-04-2016 LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 Gene3D G3DSA:3.40.50.720 2 259 1.0E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09465 2b4c0ee6ca25a52a97d6bad63d520676 264 SUPERFAMILY SSF51735 1 260 1.52E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS11875 9b707a1021219a59bd23e5b5bf513c74 620 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 527 545 6.1E-12 T 22-04-2016 LK04_RS11875 9b707a1021219a59bd23e5b5bf513c74 620 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 384 400 6.1E-12 T 22-04-2016 LK04_RS11875 9b707a1021219a59bd23e5b5bf513c74 620 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 497 516 6.1E-12 T 22-04-2016 LK04_RS11875 9b707a1021219a59bd23e5b5bf513c74 620 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 467 486 6.1E-12 T 22-04-2016 LK04_RS11875 9b707a1021219a59bd23e5b5bf513c74 620 PANTHER PTHR10046:SF49 27 581 3.1E-149 T 22-04-2016 LK04_RS11875 9b707a1021219a59bd23e5b5bf513c74 620 PANTHER PTHR10046 27 581 3.1E-149 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 LK04_RS11875 9b707a1021219a59bd23e5b5bf513c74 620 Pfam PF13654 AAA domain 179 356 3.0E-17 T 22-04-2016 LK04_RS11875 9b707a1021219a59bd23e5b5bf513c74 620 Gene3D G3DSA:3.30.230.10 376 576 1.0E-35 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS11875 9b707a1021219a59bd23e5b5bf513c74 620 SUPERFAMILY SSF54211 384 575 2.16E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS11875 9b707a1021219a59bd23e5b5bf513c74 620 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 470 572 3.4E-10 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 LK04_RS18395 985c1cf2014161557b1f6795ec0a00d8 211 PANTHER PTHR31527 14 211 4.1E-56 T 22-04-2016 LK04_RS18395 985c1cf2014161557b1f6795ec0a00d8 211 Pfam PF09347 Domain of unknown function (DUF1989) 17 185 1.9E-65 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 LK04_RS18395 985c1cf2014161557b1f6795ec0a00d8 211 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 14 211 3.3E-98 T 22-04-2016 IPR017791 Urea carboxylase-associated protein 1 LK04_RS18395 985c1cf2014161557b1f6795ec0a00d8 211 PANTHER PTHR31527:SF0 14 211 4.1E-56 T 22-04-2016 LK04_RS06145 b548fe31d562a80622666f000bc584e6 431 Pfam PF05045 Rhamnan synthesis protein F 77 215 1.5E-6 T 22-04-2016 IPR007739 Rhamnan synthesis F LK04_RS08875 60d58b23675f645f7fef700068f1a7aa 111 Gene3D G3DSA:2.60.120.10 2 107 1.2E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS08875 60d58b23675f645f7fef700068f1a7aa 111 SUPERFAMILY SSF51182 4 103 1.07E-22 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS08875 60d58b23675f645f7fef700068f1a7aa 111 Pfam PF07883 Cupin domain 33 99 2.2E-16 T 22-04-2016 IPR013096 Cupin 2, conserved barrel LK04_RS08325 047c8236c8d62455326b646a1017aead 688 PANTHER PTHR30252:SF2 5 684 0.0 T 22-04-2016 LK04_RS08325 047c8236c8d62455326b646a1017aead 688 PANTHER PTHR30252 5 684 0.0 T 22-04-2016 LK04_RS08325 047c8236c8d62455326b646a1017aead 688 Pfam PF02554 Carbon starvation protein CstA 32 408 1.4E-170 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 LK04_RS08325 047c8236c8d62455326b646a1017aead 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 2.9E-32 T 22-04-2016 IPR025299 CstA, C-terminal domain LK04_RS00440 9e2409a8ff33e5d383b1354e65dcb3d9 407 PANTHER PTHR23517 1 397 1.4E-147 T 22-04-2016 LK04_RS00440 9e2409a8ff33e5d383b1354e65dcb3d9 407 Pfam PF07690 Major Facilitator Superfamily 28 267 3.3E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS00440 9e2409a8ff33e5d383b1354e65dcb3d9 407 PANTHER PTHR23517:SF4 1 397 1.4E-147 T 22-04-2016 LK04_RS00440 9e2409a8ff33e5d383b1354e65dcb3d9 407 Gene3D G3DSA:1.20.1250.20 17 207 6.9E-19 T 22-04-2016 LK04_RS00440 9e2409a8ff33e5d383b1354e65dcb3d9 407 SUPERFAMILY SSF103473 17 404 4.84E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS00440 9e2409a8ff33e5d383b1354e65dcb3d9 407 Gene3D G3DSA:1.20.1250.20 223 402 2.2E-19 T 22-04-2016 LK04_RS17475 e9efa4006e9457b10caa106687c76d0b 255 SMART SM00382 30 230 1.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS17475 e9efa4006e9457b10caa106687c76d0b 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS17475 e9efa4006e9457b10caa106687c76d0b 255 Gene3D G3DSA:3.40.50.300 2 251 8.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17475 e9efa4006e9457b10caa106687c76d0b 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 6.0E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LK04_RS17475 e9efa4006e9457b10caa106687c76d0b 255 SUPERFAMILY SSF52540 4 253 1.92E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17475 e9efa4006e9457b10caa106687c76d0b 255 PANTHER PTHR24220 128 254 7.8E-127 T 22-04-2016 LK04_RS17475 e9efa4006e9457b10caa106687c76d0b 255 PANTHER PTHR24220 7 112 7.8E-127 T 22-04-2016 LK04_RS17475 e9efa4006e9457b10caa106687c76d0b 255 Pfam PF00005 ABC transporter 21 181 2.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS17475 e9efa4006e9457b10caa106687c76d0b 255 PANTHER PTHR24220:SF358 128 254 7.8E-127 T 22-04-2016 LK04_RS17475 e9efa4006e9457b10caa106687c76d0b 255 PANTHER PTHR24220:SF358 7 112 7.8E-127 T 22-04-2016 LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 Gene3D G3DSA:3.30.565.10 334 480 2.7E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 Pfam PF00672 HAMP domain 180 248 1.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 329 1.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 PANTHER PTHR24423 193 480 2.6E-60 T 22-04-2016 LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 PANTHER PTHR24423 69 124 2.6E-60 T 22-04-2016 LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 SUPERFAMILY SSF47384 246 329 1.96E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 SMART SM00387 375 480 1.6E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 Gene3D G3DSA:1.10.287.130 252 325 6.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 1.9E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 1.9E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 SUPERFAMILY SSF55874 319 480 6.55E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 480 3.3E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS09660 6fd6dc65bc827d39d46f5d7ad34b00dd 480 SMART SM00388 261 329 2.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS11870 5567af3712ff56fa70826e684dda464d 179 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 25 171 7.1E-74 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 LK04_RS11870 5567af3712ff56fa70826e684dda464d 179 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 25 155 7.0E-58 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 LK04_RS11870 5567af3712ff56fa70826e684dda464d 179 Hamap MF_01073 Macrodomain Ter protein [matP]. 25 172 29.713 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 PANTHER PTHR30046 4 330 2.1E-206 T 22-04-2016 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 PANTHER PTHR30046 360 573 2.1E-206 T 22-04-2016 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 PANTHER PTHR30046:SF0 4 330 2.1E-206 T 22-04-2016 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 PANTHER PTHR30046:SF0 360 573 2.1E-206 T 22-04-2016 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 PRINTS PR01009 Flagellar M-ring protein signature 200 218 6.2E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 PRINTS PR01009 Flagellar M-ring protein signature 125 143 6.2E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 PRINTS PR01009 Flagellar M-ring protein signature 377 401 6.2E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 PRINTS PR01009 Flagellar M-ring protein signature 157 171 6.2E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 PRINTS PR01009 Flagellar M-ring protein signature 269 287 6.2E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 Pfam PF01514 Secretory protein of YscJ/FliF family 35 224 3.6E-78 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 Pfam PF08345 Flagellar M-ring protein C-terminal 256 449 4.2E-46 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 13 572 6.1E-183 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LK04_RS06955 56da5d4c48f422f4f96e08503b7b58c0 574 PIRSF PIRSF004862 7 574 9.4E-169 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LK04_RS16235 2f8df3addb7aee97df1237c88c2b20e0 500 Gene3D G3DSA:3.40.50.300 20 108 5.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16235 2f8df3addb7aee97df1237c88c2b20e0 500 Gene3D G3DSA:3.40.50.300 204 380 5.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16235 2f8df3addb7aee97df1237c88c2b20e0 500 PANTHER PTHR30121 18 441 1.1E-180 T 22-04-2016 LK04_RS16235 2f8df3addb7aee97df1237c88c2b20e0 500 PANTHER PTHR30121:SF3 18 441 1.1E-180 T 22-04-2016 LK04_RS16235 2f8df3addb7aee97df1237c88c2b20e0 500 SUPERFAMILY SSF52540 20 377 5.15E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16235 2f8df3addb7aee97df1237c88c2b20e0 500 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 500 5.4E-244 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal LK04_RS08700 a76e0fa759e69b6026ae7f73c95e8f6d 394 Gene3D G3DSA:1.20.1250.20 207 387 1.6E-11 T 22-04-2016 LK04_RS08700 a76e0fa759e69b6026ae7f73c95e8f6d 394 PANTHER PTHR23501:SF89 1 391 2.3E-216 T 22-04-2016 LK04_RS08700 a76e0fa759e69b6026ae7f73c95e8f6d 394 Pfam PF07690 Major Facilitator Superfamily 18 349 9.3E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS08700 a76e0fa759e69b6026ae7f73c95e8f6d 394 Gene3D G3DSA:1.20.1250.20 10 195 3.5E-24 T 22-04-2016 LK04_RS08700 a76e0fa759e69b6026ae7f73c95e8f6d 394 PANTHER PTHR23501 1 391 2.3E-216 T 22-04-2016 LK04_RS08700 a76e0fa759e69b6026ae7f73c95e8f6d 394 SUPERFAMILY SSF103473 5 389 5.75E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS08700 a76e0fa759e69b6026ae7f73c95e8f6d 394 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 28.47 T 22-04-2016 IPR023495 Sugar efflux transporter, putative LK04_RS14700 f764d84fa7ea528a91eb2d4f704a998d 218 Gene3D G3DSA:1.10.3720.10 9 213 6.7E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14700 f764d84fa7ea528a91eb2d4f704a998d 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 6.8E-26 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS14700 f764d84fa7ea528a91eb2d4f704a998d 218 SUPERFAMILY SSF161098 13 204 1.44E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14700 f764d84fa7ea528a91eb2d4f704a998d 218 PANTHER PTHR30614 7 218 6.3E-80 T 22-04-2016 LK04_RS14700 f764d84fa7ea528a91eb2d4f704a998d 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 212 4.9E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05215 c65c822bff73aa0bac5398f93d40038f 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LK04_RS05215 c65c822bff73aa0bac5398f93d40038f 185 PANTHER PTHR10681 1 179 1.6E-78 T 22-04-2016 LK04_RS05215 c65c822bff73aa0bac5398f93d40038f 185 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 1.4E-76 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 LK04_RS05215 c65c822bff73aa0bac5398f93d40038f 185 SUPERFAMILY SSF52833 49 178 1.21E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05215 c65c822bff73aa0bac5398f93d40038f 185 PANTHER PTHR10681:SF107 1 179 1.6E-78 T 22-04-2016 LK04_RS05215 c65c822bff73aa0bac5398f93d40038f 185 Gene3D G3DSA:3.40.30.10 10 178 1.0E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS05215 c65c822bff73aa0bac5398f93d40038f 185 Pfam PF08534 Redoxin 42 165 6.3E-23 T 22-04-2016 IPR013740 Redoxin GO:0016491 LK04_RS01205 f622e9ebf673ecdb0082e54734754ec7 489 Gene3D G3DSA:2.40.50.140 30 128 1.4E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS01205 f622e9ebf673ecdb0082e54734754ec7 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 9.5E-172 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 LK04_RS01205 f622e9ebf673ecdb0082e54734754ec7 489 SUPERFAMILY SSF50249 39 128 8.58E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS01205 f622e9ebf673ecdb0082e54734754ec7 489 PANTHER PTHR30001 1 489 3.9E-220 T 22-04-2016 LK04_RS01205 f622e9ebf673ecdb0082e54734754ec7 489 SMART SM00316 37 122 2.2E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 LK04_RS01205 f622e9ebf673ecdb0082e54734754ec7 489 Pfam PF00575 S1 RNA binding domain 38 109 6.4E-5 T 22-04-2016 IPR003029 S1 domain GO:0003676 LK04_RS01205 f622e9ebf673ecdb0082e54734754ec7 489 Pfam PF10150 Ribonuclease E/G family 124 393 3.0E-98 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.1E-51 T 22-04-2016 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 SUPERFAMILY SSF54980 399 493 8.63E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 Gene3D G3DSA:2.40.30.10 193 289 1.5E-24 T 22-04-2016 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.4E-299 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 SUPERFAMILY SSF54980 292 370 2.95E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 Pfam PF00679 Elongation factor G C-terminus 399 482 2.5E-19 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 Gene3D G3DSA:3.30.70.870 291 369 1.4E-25 T 22-04-2016 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.309 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.1E-48 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 Gene3D G3DSA:3.40.50.300 2 192 5.6E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 PANTHER PTHR23115:SF175 401 595 5.1E-275 T 22-04-2016 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 PANTHER PTHR23115:SF175 2 373 5.1E-275 T 22-04-2016 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 6.8E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 Gene3D G3DSA:3.30.70.240 401 489 6.9E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 SUPERFAMILY SSF52540 2 235 8.86E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 PANTHER PTHR23115 401 595 5.1E-275 T 22-04-2016 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 PANTHER PTHR23115 2 373 5.1E-275 T 22-04-2016 LK04_RS04020 07cc575f934dcfb206785cfe7b0d57d7 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 169 3.3E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LK04_RS05635 1eb79792760f8339ceebd350427d0e76 186 SUPERFAMILY SSF48498 88 182 1.11E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LK04_RS05635 1eb79792760f8339ceebd350427d0e76 186 Gene3D G3DSA:1.10.357.10 13 177 3.0E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS05635 1eb79792760f8339ceebd350427d0e76 186 PANTHER PTHR30055:SF47 14 168 4.0E-23 T 22-04-2016 LK04_RS05635 1eb79792760f8339ceebd350427d0e76 186 SUPERFAMILY SSF46689 12 87 1.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS05635 1eb79792760f8339ceebd350427d0e76 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.3E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS05635 1eb79792760f8339ceebd350427d0e76 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.3E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS05635 1eb79792760f8339ceebd350427d0e76 186 PANTHER PTHR30055 14 168 4.0E-23 T 22-04-2016 LK04_RS05635 1eb79792760f8339ceebd350427d0e76 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.5E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 Gene3D G3DSA:3.30.1490.20 151 224 1.4E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 PANTHER PTHR23132 1 361 2.9E-172 T 22-04-2016 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 PIRSF PIRSF039102 1 359 3.1E-131 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 3.8E-116 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 Gene3D G3DSA:3.40.50.20 1 129 5.4E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 SUPERFAMILY SSF52440 3 139 2.69E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 Gene3D G3DSA:3.30.470.20 225 362 5.5E-54 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 4.0E-78 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 SUPERFAMILY SSF56059 140 356 7.42E-63 T 22-04-2016 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 1.3E-31 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 PANTHER PTHR23132:SF8 1 361 2.9E-172 T 22-04-2016 LK04_RS01765 eb975106b431a5cb9461c848a9e7beea 364 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.684 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS14940 ca630ed98a68f6bd606684bd742ac2e9 166 PANTHER PTHR35089:SF1 2 165 6.4E-50 T 22-04-2016 LK04_RS14940 ca630ed98a68f6bd606684bd742ac2e9 166 Gene3D G3DSA:3.30.910.20 87 166 8.9E-24 T 22-04-2016 LK04_RS14940 ca630ed98a68f6bd606684bd742ac2e9 166 Gene3D G3DSA:3.30.910.20 13 80 4.9E-15 T 22-04-2016 LK04_RS14940 ca630ed98a68f6bd606684bd742ac2e9 166 SMART SM00935 12 166 2.4E-52 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 LK04_RS14940 ca630ed98a68f6bd606684bd742ac2e9 166 PIRSF PIRSF002094 1 166 4.4E-53 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 LK04_RS14940 ca630ed98a68f6bd606684bd742ac2e9 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 164 9.9E-35 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 LK04_RS14940 ca630ed98a68f6bd606684bd742ac2e9 166 PANTHER PTHR35089 2 165 6.4E-50 T 22-04-2016 LK04_RS14940 ca630ed98a68f6bd606684bd742ac2e9 166 SUPERFAMILY SSF111384 22 165 9.29E-36 T 22-04-2016 IPR024930 Skp domain LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 SUPERFAMILY SSF46689 9 59 2.82E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 PANTHER PTHR11019 11 116 3.3E-44 T 22-04-2016 LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 2.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 2.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 SMART SM00342 25 108 4.8E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 Gene3D G3DSA:1.10.10.60 8 61 6.3E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 Gene3D G3DSA:1.10.10.60 62 109 1.8E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 Gene3D G3DSA:3.20.80.10 129 285 5.8E-26 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 SUPERFAMILY SSF55136 131 285 1.07E-11 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 PANTHER PTHR11019:SF84 11 116 3.3E-44 T 22-04-2016 LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 Pfam PF12833 Helix-turn-helix domain 35 109 3.5E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS02555 61bee554916230b8ecdd18edf85142f3 288 SUPERFAMILY SSF46689 61 109 1.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS07835 17e41ce57037e0af0346aa06de4eea0a 189 Pfam PF00293 NUDIX domain 28 141 3.7E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS07835 17e41ce57037e0af0346aa06de4eea0a 189 PANTHER PTHR12992 28 182 6.2E-55 T 22-04-2016 LK04_RS07835 17e41ce57037e0af0346aa06de4eea0a 189 SUPERFAMILY SSF55811 11 182 1.76E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS07835 17e41ce57037e0af0346aa06de4eea0a 189 Gene3D G3DSA:3.90.79.10 26 182 1.2E-38 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS07835 17e41ce57037e0af0346aa06de4eea0a 189 ProSitePatterns PS01293 Nudix CoA signature. 45 65 - T 22-04-2016 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 PANTHER PTHR11444:SF17 4 455 0.0 T 22-04-2016 LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 Gene3D G3DSA:1.20.200.10 120 389 3.3E-87 T 22-04-2016 LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 SUPERFAMILY SSF48557 10 454 3.93E-105 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 Gene3D G3DSA:1.10.40.30 390 445 7.6E-34 T 22-04-2016 LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 1.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 1.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 PANTHER PTHR11444 4 455 0.0 T 22-04-2016 IPR000362 Fumarate lyase family LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 Pfam PF00206 Lyase 14 312 1.4E-76 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 3.0E-151 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 Gene3D G3DSA:1.10.275.10 1 119 1.8E-50 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 3.2E-52 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LK04_RS11160 7f8d8e1421c41823bfcf24275c083afd 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LK04_RS07375 17cb7323a5caf789a3e2a8b449c09911 206 Pfam PF01810 LysE type translocator 13 204 8.2E-37 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS07375 17cb7323a5caf789a3e2a8b449c09911 206 PANTHER PTHR30086:SF2 1 203 9.7E-54 T 22-04-2016 LK04_RS07375 17cb7323a5caf789a3e2a8b449c09911 206 PANTHER PTHR30086 1 203 9.7E-54 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS07375 17cb7323a5caf789a3e2a8b449c09911 206 PIRSF PIRSF006324 1 206 1.1E-52 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 Gene3D G3DSA:3.20.70.20 131 344 1.6E-42 T 22-04-2016 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 Gene3D G3DSA:3.20.70.20 398 559 1.6E-42 T 22-04-2016 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 Gene3D G3DSA:3.20.70.20 610 700 1.6E-42 T 22-04-2016 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 7.9E-179 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 SUPERFAMILY SSF51998 222 740 2.87E-169 T 22-04-2016 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.2E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.2E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.2E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.2E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.2E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.2E-40 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 PANTHER PTHR11573 6 752 0.0 T 22-04-2016 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 3.1E-120 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 PANTHER PTHR11573:SF17 6 752 0.0 T 22-04-2016 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 Pfam PF03477 ATP cone domain 6 92 3.4E-15 T 22-04-2016 IPR005144 ATP-cone domain LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 1.4E-12 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS05585 67bffa5eac838137233e5f36078ecd2a 761 SUPERFAMILY SSF48168 10 221 6.54E-72 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LK04_RS16940 5c96b972b3bb1021d5265a787b8b41a2 231 PANTHER PTHR24322 13 177 1.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16940 5c96b972b3bb1021d5265a787b8b41a2 231 Gene3D G3DSA:3.40.50.720 9 230 2.6E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16940 5c96b972b3bb1021d5265a787b8b41a2 231 SUPERFAMILY SSF51735 9 230 9.63E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16940 5c96b972b3bb1021d5265a787b8b41a2 231 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 229 1.3E-35 T 22-04-2016 LK04_RS16940 5c96b972b3bb1021d5265a787b8b41a2 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 1.0E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16940 5c96b972b3bb1021d5265a787b8b41a2 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 1.0E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16940 5c96b972b3bb1021d5265a787b8b41a2 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 1.0E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16940 5c96b972b3bb1021d5265a787b8b41a2 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.0E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16940 5c96b972b3bb1021d5265a787b8b41a2 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 1.0E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16940 5c96b972b3bb1021d5265a787b8b41a2 231 PANTHER PTHR24322:SF378 13 177 1.3E-26 T 22-04-2016 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 Gene3D G3DSA:3.40.50.1370 4 143 4.2E-57 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 2.5E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 2.5E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 2.5E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 2.5E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 2.5E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 83.219 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 1.1E-55 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PANTHER PTHR11405 1 276 2.8E-220 T 22-04-2016 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PANTHER PTHR11405 297 333 2.8E-220 T 22-04-2016 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 Gene3D G3DSA:3.40.50.1370 144 319 3.1E-74 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 3.4E-47 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.5E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.5E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.5E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.5E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PANTHER PTHR11405:SF42 1 276 2.8E-220 T 22-04-2016 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 PANTHER PTHR11405:SF42 297 333 2.8E-220 T 22-04-2016 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 6.9E-135 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 SUPERFAMILY SSF53671 2 333 1.17E-100 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16285 e6e2f12e99db83f16cc4d48f3060244b 335 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS13815 8b03bfed39f6441097b812aa3077a142 183 SUPERFAMILY SSF53271 14 180 4.12E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS13815 8b03bfed39f6441097b812aa3077a142 183 Gene3D G3DSA:3.40.50.2020 7 180 1.2E-69 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS13815 8b03bfed39f6441097b812aa3077a142 183 PANTHER PTHR32315 1 183 6.0E-84 T 22-04-2016 LK04_RS13815 8b03bfed39f6441097b812aa3077a142 183 Pfam PF00156 Phosphoribosyl transferase domain 32 153 3.5E-14 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LK04_RS13815 8b03bfed39f6441097b812aa3077a142 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 38.212 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 LK04_RS13815 8b03bfed39f6441097b812aa3077a142 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 179 6.0E-71 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 LK04_RS03000 f0a637265adff0f085b5612e360ae4ed 217 PANTHER PTHR20855 15 216 4.4E-68 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 LK04_RS03000 f0a637265adff0f085b5612e360ae4ed 217 PANTHER PTHR20855:SF3 15 216 4.4E-68 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 LK04_RS03000 f0a637265adff0f085b5612e360ae4ed 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 1.2E-71 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 LK04_RS03000 f0a637265adff0f085b5612e360ae4ed 217 Pfam PF03006 Haemolysin-III related 12 209 1.4E-37 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 Pfam PF01266 FAD dependent oxidoreductase 7 331 1.3E-45 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 11 28 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 SUPERFAMILY SSF54373 231 324 1.37E-6 T 22-04-2016 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 SUPERFAMILY SSF51905 6 265 3.17E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 SUPERFAMILY SSF51905 317 375 3.17E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 PANTHER PTHR11985 3 498 3.2E-177 T 22-04-2016 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 Gene3D G3DSA:3.50.50.60 7 239 2.4E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 PANTHER PTHR11985:SF1 3 498 3.2E-177 T 22-04-2016 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 385 487 1.6E-12 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 4.0E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 4.0E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 351 363 4.0E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 318 324 4.0E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 80 92 4.0E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS08940 afa7096578b950375a9174f8280f3830 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 4.0E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 Pfam PF00682 HMGL-like 31 311 9.4E-69 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 552 2.4E-21 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 SMART SM00917 422 553 3.2E-25 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 SUPERFAMILY SSF51569 20 328 1.57E-95 T 22-04-2016 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 554 51.947 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 PANTHER PTHR10277 1 561 3.4E-288 T 22-04-2016 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 SUPERFAMILY SSF89000 388 436 1.06E-13 T 22-04-2016 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 PANTHER PTHR10277:SF28 1 561 3.4E-288 T 22-04-2016 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 SUPERFAMILY SSF110921 445 549 8.63E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 Gene3D G3DSA:3.20.20.70 9 394 1.4E-141 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS09580 586b4bf0717edf49cb95dbdf5c088e5d 561 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 548 8.1E-233 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 Gene3D G3DSA:3.40.50.2300 174 275 3.8E-32 T 22-04-2016 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 3.4E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 PANTHER PTHR30146 4 309 2.7E-151 T 22-04-2016 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 SUPERFAMILY SSF53822 63 314 3.93E-52 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 Pfam PF13377 Periplasmic binding protein-like domain 169 315 1.3E-14 T 22-04-2016 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 309 6.2E-131 T 22-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 PANTHER PTHR30146:SF42 4 309 2.7E-151 T 22-04-2016 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 Gene3D G3DSA:1.10.260.40 6 56 1.4E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.0E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.0E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 Gene3D G3DSA:3.40.50.2300 57 173 1.2E-20 T 22-04-2016 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 SMART SM00354 4 74 8.5E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS19335 c5ab636d8524b38cb94c6c473392a37b 318 SUPERFAMILY SSF47413 3 60 2.49E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 SUPERFAMILY SSF52374 65 234 1.13E-17 T 22-04-2016 LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 PIRSF PIRSF004776 2 408 1.5E-208 T 22-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 2.3E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 Pfam PF01381 Helix-turn-helix 7 58 2.1E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 Gene3D G3DSA:1.10.260.40 5 58 1.8E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 Gene3D G3DSA:3.40.50.620 64 230 4.5E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 SMART SM00530 6 62 5.7E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 5.8E-155 T 22-04-2016 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 PANTHER PTHR37512 14 406 7.9E-149 T 22-04-2016 LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 SUPERFAMILY SSF52540 232 385 9.15E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 SUPERFAMILY SSF47413 6 59 8.3E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 Gene3D G3DSA:3.40.50.300 231 400 6.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15945 c6682fb2f4821e0c0be468cb99734114 408 Pfam PF13521 AAA domain 234 394 1.8E-30 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 207 754 8.3E-172 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 SUPERFAMILY SSF55008 72 135 4.06E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 Pfam PF00122 E1-E2 ATPase 228 449 6.9E-57 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 652 671 5.4E-29 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 472 5.4E-29 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 601 611 5.4E-29 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 579 590 5.4E-29 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 675 687 5.4E-29 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 307 321 5.4E-29 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 Gene3D G3DSA:3.40.1110.10 472 581 1.7E-16 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 207 555 1.1E-94 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 SUPERFAMILY SSF56784 458 477 7.7E-47 T 22-04-2016 IPR023214 HAD-like domain LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 SUPERFAMILY SSF56784 515 752 7.7E-47 T 22-04-2016 IPR023214 HAD-like domain LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 PANTHER PTHR24093 58 730 9.1E-217 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 Gene3D G3DSA:2.70.150.10 252 358 2.5E-22 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 Pfam PF00403 Heavy-metal-associated domain 76 132 2.3E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 SUPERFAMILY SSF81665 209 261 1.7E-12 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 SUPERFAMILY SSF81665 701 740 1.7E-12 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 SUPERFAMILY SSF81665 358 452 1.7E-12 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 460 466 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 Gene3D G3DSA:3.30.70.100 72 136 4.1E-16 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 Gene3D G3DSA:3.40.50.1000 431 471 1.5E-44 T 22-04-2016 IPR023214 HAD-like domain LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 Gene3D G3DSA:3.40.50.1000 582 718 1.5E-44 T 22-04-2016 IPR023214 HAD-like domain LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 PANTHER PTHR24093:SF126 58 730 9.1E-217 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 SUPERFAMILY SSF81653 260 357 1.7E-20 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 Pfam PF00702 haloacid dehalogenase-like hydrolase 454 665 4.4E-37 T 22-04-2016 LK04_RS17540 240382511fdd0d3e44a26bc567c58884 758 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 230 731 5.1E-76 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 SMART SM00382 365 550 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 Pfam PF00664 ABC transporter transmembrane region 87 285 5.7E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 PANTHER PTHR24222 1 573 4.1E-234 T 22-04-2016 LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 Gene3D G3DSA:3.40.50.300 338 567 5.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 SUPERFAMILY SSF90123 7 322 1.96E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 Gene3D G3DSA:1.20.1560.10 7 327 3.9E-33 T 22-04-2016 LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 SUPERFAMILY SSF52540 332 572 4.91E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 Pfam PF00005 ABC transporter 356 503 8.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 534 5.2E-156 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 LK04_RS12155 9b3ab7112b3bed29c63c3b68cd50fb65 576 PANTHER PTHR24222:SF30 1 573 4.1E-234 T 22-04-2016 LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 1.0E-5 T 22-04-2016 LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 404 423 1.0E-5 T 22-04-2016 LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 1.0E-5 T 22-04-2016 LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 1.0E-5 T 22-04-2016 LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 PANTHER PTHR23501 7 457 1.3E-161 T 22-04-2016 LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 PANTHER PTHR23501:SF5 7 457 1.3E-161 T 22-04-2016 LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 Pfam PF07690 Major Facilitator Superfamily 22 413 5.0E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 Gene3D G3DSA:1.20.1250.20 265 452 3.9E-19 T 22-04-2016 LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 Gene3D G3DSA:1.20.1250.20 16 201 1.4E-28 T 22-04-2016 LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 SUPERFAMILY SSF103473 10 201 3.14E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS07765 1f26e0c3aa15c4323066452e43e59bbd 460 SUPERFAMILY SSF103473 252 451 3.14E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS13850 22eedebffcc8ba65cc73c33fe36df5a8 85 PANTHER PTHR33280 1 81 5.1E-38 T 22-04-2016 LK04_RS13850 22eedebffcc8ba65cc73c33fe36df5a8 85 PANTHER PTHR33280:SF3 1 81 5.1E-38 T 22-04-2016 LK04_RS13850 22eedebffcc8ba65cc73c33fe36df5a8 85 PRINTS PR01249 Ribosomal protein L31 signature 59 77 2.7E-12 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS13850 22eedebffcc8ba65cc73c33fe36df5a8 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.7E-12 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS13850 22eedebffcc8ba65cc73c33fe36df5a8 85 PRINTS PR01249 Ribosomal protein L31 signature 44 59 2.7E-12 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS13850 22eedebffcc8ba65cc73c33fe36df5a8 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.544 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS13850 22eedebffcc8ba65cc73c33fe36df5a8 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 7.8E-15 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS13850 22eedebffcc8ba65cc73c33fe36df5a8 85 Pfam PF01197 Ribosomal protein L31 1 78 4.8E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS13850 22eedebffcc8ba65cc73c33fe36df5a8 85 SUPERFAMILY SSF143800 1 80 1.65E-18 T 22-04-2016 LK04_RS03855 d702c084438458f0949a6eebf4187a0f 319 PANTHER PTHR30024:SF14 11 282 9.6E-79 T 22-04-2016 LK04_RS03855 d702c084438458f0949a6eebf4187a0f 319 Pfam PF09084 NMT1/THI5 like 39 247 4.1E-23 T 22-04-2016 IPR015168 SsuA/THI5-like LK04_RS03855 d702c084438458f0949a6eebf4187a0f 319 PANTHER PTHR30024 11 282 9.6E-79 T 22-04-2016 LK04_RS03855 d702c084438458f0949a6eebf4187a0f 319 Gene3D G3DSA:3.40.190.10 117 232 3.2E-21 T 22-04-2016 LK04_RS03855 d702c084438458f0949a6eebf4187a0f 319 SUPERFAMILY SSF53850 28 247 3.92E-40 T 22-04-2016 LK04_RS03855 d702c084438458f0949a6eebf4187a0f 319 SMART SM00062 30 276 0.0028 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS17120 9a9127dea09e08b79ca459089f71d8a2 69 Pfam PF07338 Protein of unknown function (DUF1471) 24 67 8.2E-7 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS17120 9a9127dea09e08b79ca459089f71d8a2 69 Gene3D G3DSA:3.30.1660.10 24 67 3.7E-9 T 22-04-2016 IPR025543 Dodecin-like LK04_RS17120 9a9127dea09e08b79ca459089f71d8a2 69 SUPERFAMILY SSF159871 3 67 1.44E-9 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS08980 41f55a22b4ebf4f58ad3d87494d8b611 456 Gene3D G3DSA:3.20.20.140 123 400 9.9E-84 T 22-04-2016 LK04_RS08980 41f55a22b4ebf4f58ad3d87494d8b611 456 PANTHER PTHR32027:SF9 49 456 1.6E-152 T 22-04-2016 LK04_RS08980 41f55a22b4ebf4f58ad3d87494d8b611 456 Pfam PF07969 Amidohydrolase family 220 399 2.4E-8 T 22-04-2016 IPR013108 Amidohydrolase 3 LK04_RS08980 41f55a22b4ebf4f58ad3d87494d8b611 456 SUPERFAMILY SSF51338 75 127 5.5E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS08980 41f55a22b4ebf4f58ad3d87494d8b611 456 PANTHER PTHR32027 49 456 1.6E-152 T 22-04-2016 LK04_RS08980 41f55a22b4ebf4f58ad3d87494d8b611 456 Gene3D G3DSA:2.30.40.10 66 122 2.8E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS08980 41f55a22b4ebf4f58ad3d87494d8b611 456 SUPERFAMILY SSF51556 115 398 1.59E-61 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.4E-24 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 SUPERFAMILY SSF51206 8 136 7.86E-36 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.7E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 Gene3D G3DSA:2.60.120.10 6 143 9.0E-45 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 PANTHER PTHR24567 1 207 1.8E-156 T 22-04-2016 LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 SMART SM00419 160 208 4.5E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 PANTHER PTHR24567:SF27 1 207 1.8E-156 T 22-04-2016 LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 LK04_RS00725 c3d069b1e3ab190809c97146440094f4 210 SMART SM00100 2 122 1.1E-26 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain LK04_RS14645 18846156daffdebf267930a9801b33d3 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.43 T 22-04-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389|UniPathway: UPA00904 LK04_RS14645 18846156daffdebf267930a9801b33d3 180 Gene3D G3DSA:2.60.120.10 4 179 3.3E-57 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS14645 18846156daffdebf267930a9801b33d3 180 Pfam PF03079 ARD/ARD' family 5 165 1.6E-37 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 LK04_RS14645 18846156daffdebf267930a9801b33d3 180 PANTHER PTHR23418 19 178 1.3E-29 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 LK04_RS14645 18846156daffdebf267930a9801b33d3 180 SUPERFAMILY SSF51182 4 178 2.23E-43 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 Pfam PF00005 ABC transporter 18 184 9.0E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 Pfam PF00005 ABC transporter 336 467 2.6E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 Gene3D G3DSA:3.40.50.300 318 528 1.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 Gene3D G3DSA:3.40.50.300 4 270 8.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 SMART SM00382 344 521 1.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 SMART SM00382 26 228 5.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 PANTHER PTHR19211 2 527 0.0 T 22-04-2016 LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 Pfam PF12848 ABC transporter 224 309 2.1E-21 T 22-04-2016 IPR032781 ABC-transporter extension domain LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 SUPERFAMILY SSF52540 6 237 2.99E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 PANTHER PTHR19211:SF38 2 527 0.0 T 22-04-2016 LK04_RS12395 60d4c723f8925f0bc11334081d575c5e 530 SUPERFAMILY SSF52540 298 523 8.16E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 Pfam PF01578 Cytochrome C assembly protein 89 296 7.3E-55 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 6.6E-280 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PANTHER PTHR30009:SF0 1 418 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PANTHER PTHR30009:SF0 470 649 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.2E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.2E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.2E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.2E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.2E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.2E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.2E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.2E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 1.6E-130 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PANTHER PTHR30009 1 418 0.0 T 22-04-2016 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PANTHER PTHR30009 470 649 0.0 T 22-04-2016 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.6E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.6E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.6E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.6E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 1.6E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.6E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05210 9329915b092602821cacfdbb1de877d9 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.6E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS00520 032e8104982712963b80bd8dac27d1f9 681 PANTHER PTHR32438:SF5 54 553 5.7E-208 T 22-04-2016 LK04_RS00520 032e8104982712963b80bd8dac27d1f9 681 PANTHER PTHR32438:SF5 571 679 5.7E-208 T 22-04-2016 LK04_RS00520 032e8104982712963b80bd8dac27d1f9 681 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 99 673 6.8E-215 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 LK04_RS00520 032e8104982712963b80bd8dac27d1f9 681 PANTHER PTHR32438 54 553 5.7E-208 T 22-04-2016 LK04_RS00520 032e8104982712963b80bd8dac27d1f9 681 PANTHER PTHR32438 571 679 5.7E-208 T 22-04-2016 LK04_RS00520 032e8104982712963b80bd8dac27d1f9 681 SUPERFAMILY SSF51445 139 562 2.27E-146 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS00520 032e8104982712963b80bd8dac27d1f9 681 SUPERFAMILY SSF51445 599 671 2.27E-146 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS00520 032e8104982712963b80bd8dac27d1f9 681 Pfam PF02446 4-alpha-glucanotransferase 145 656 3.6E-131 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 LK04_RS00520 032e8104982712963b80bd8dac27d1f9 681 Gene3D G3DSA:3.20.20.80 603 669 4.6E-158 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS00520 032e8104982712963b80bd8dac27d1f9 681 Gene3D G3DSA:3.20.20.80 137 565 4.6E-158 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS02475 8facfd8a347476e42c0dc3f294b0aea1 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 226 1.5E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02475 8facfd8a347476e42c0dc3f294b0aea1 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 121 2.7E-14 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS02475 8facfd8a347476e42c0dc3f294b0aea1 230 SUPERFAMILY SSF161098 14 212 3.14E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02475 8facfd8a347476e42c0dc3f294b0aea1 230 Gene3D G3DSA:1.10.3720.10 13 227 8.6E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02475 8facfd8a347476e42c0dc3f294b0aea1 230 PANTHER PTHR30614 1 230 3.8E-45 T 22-04-2016 LK04_RS00880 002a55a306bc3f68b969b66c8593072a 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.199 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 LK04_RS00880 002a55a306bc3f68b969b66c8593072a 100 Gene3D G3DSA:3.30.70.330 6 98 8.4E-34 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 LK04_RS00880 002a55a306bc3f68b969b66c8593072a 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site LK04_RS00880 002a55a306bc3f68b969b66c8593072a 100 Pfam PF00276 Ribosomal protein L23 9 95 2.2E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 LK04_RS00880 002a55a306bc3f68b969b66c8593072a 100 SUPERFAMILY SSF54189 6 97 2.7E-30 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00880 002a55a306bc3f68b969b66c8593072a 100 PANTHER PTHR11620 9 95 2.0E-30 T 22-04-2016 LK04_RS06930 66cf72840f3fd86099acae55ae8ec4af 426 PRINTS PR01007 Flagellar hook-length control protein signature 326 341 5.9E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LK04_RS06930 66cf72840f3fd86099acae55ae8ec4af 426 PRINTS PR01007 Flagellar hook-length control protein signature 260 282 5.9E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LK04_RS06930 66cf72840f3fd86099acae55ae8ec4af 426 PRINTS PR01007 Flagellar hook-length control protein signature 341 364 5.9E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LK04_RS06930 66cf72840f3fd86099acae55ae8ec4af 426 PRINTS PR01007 Flagellar hook-length control protein signature 308 326 5.9E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LK04_RS06930 66cf72840f3fd86099acae55ae8ec4af 426 PRINTS PR01007 Flagellar hook-length control protein signature 283 305 5.9E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LK04_RS06930 66cf72840f3fd86099acae55ae8ec4af 426 PRINTS PR01007 Flagellar hook-length control protein signature 2 15 5.9E-37 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 LK04_RS06930 66cf72840f3fd86099acae55ae8ec4af 426 Pfam PF02120 Flagellar hook-length control protein FliK 294 374 6.6E-22 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal LK04_RS06930 66cf72840f3fd86099acae55ae8ec4af 426 PANTHER PTHR37533 237 426 1.3E-52 T 22-04-2016 LK04_RS07210 76818be14864b96d7969c3403b10a7fe 207 Pfam PF03550 Outer membrane lipoprotein LolB 51 204 3.1E-45 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 LK04_RS07210 76818be14864b96d7969c3403b10a7fe 207 PANTHER PTHR30634 6 207 1.1E-56 T 22-04-2016 LK04_RS07210 76818be14864b96d7969c3403b10a7fe 207 PANTHER PTHR30634:SF11 6 207 1.1E-56 T 22-04-2016 LK04_RS07210 76818be14864b96d7969c3403b10a7fe 207 Gene3D G3DSA:2.50.20.10 15 206 3.1E-65 T 22-04-2016 LK04_RS07210 76818be14864b96d7969c3403b10a7fe 207 SUPERFAMILY SSF89392 33 205 7.06E-51 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX LK04_RS07210 76818be14864b96d7969c3403b10a7fe 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 28.226 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 LK04_RS07210 76818be14864b96d7969c3403b10a7fe 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 205 2.1E-73 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 LK04_RS11710 377e126d954850f89e82ec56362c5e3a 232 Pfam PF06904 Extensin-like protein C-terminus 58 232 2.3E-48 T 22-04-2016 IPR009683 Extensin-like, C-terminal LK04_RS05600 13ec444d38d2b059461d6f9fadd58e4b 241 PANTHER PTHR10108:SF910 10 237 3.2E-159 T 22-04-2016 LK04_RS05600 13ec444d38d2b059461d6f9fadd58e4b 241 SUPERFAMILY SSF53335 1 234 8.84E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS05600 13ec444d38d2b059461d6f9fadd58e4b 241 Pfam PF13489 Methyltransferase domain 57 186 1.2E-24 T 22-04-2016 LK04_RS05600 13ec444d38d2b059461d6f9fadd58e4b 241 PANTHER PTHR10108 10 237 3.2E-159 T 22-04-2016 LK04_RS05600 13ec444d38d2b059461d6f9fadd58e4b 241 Gene3D G3DSA:3.40.50.150 28 223 7.9E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS05600 13ec444d38d2b059461d6f9fadd58e4b 241 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.529 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 LK04_RS05600 13ec444d38d2b059461d6f9fadd58e4b 241 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 8.7E-89 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 LK04_RS13515 98fa395643d6c0f897f7ed9c8cd52487 333 PANTHER PTHR21716:SF17 14 323 5.2E-42 T 22-04-2016 LK04_RS13515 98fa395643d6c0f897f7ed9c8cd52487 333 Pfam PF01594 Domain of unknown function DUF20 16 326 6.8E-42 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LK04_RS13515 98fa395643d6c0f897f7ed9c8cd52487 333 PANTHER PTHR21716 14 323 5.2E-42 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LK04_RS12315 8502c3ab7605d675bf9b10cfd70dcbff 201 SMART SM00014 63 168 3.0E-18 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS12315 8502c3ab7605d675bf9b10cfd70dcbff 201 PANTHER PTHR14969:SF20 2 196 2.2E-58 T 22-04-2016 LK04_RS12315 8502c3ab7605d675bf9b10cfd70dcbff 201 SUPERFAMILY SSF48317 1 172 2.49E-36 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS12315 8502c3ab7605d675bf9b10cfd70dcbff 201 Pfam PF01569 PAP2 superfamily 78 169 3.3E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS12315 8502c3ab7605d675bf9b10cfd70dcbff 201 PANTHER PTHR14969 2 196 2.2E-58 T 22-04-2016 LK04_RS12315 8502c3ab7605d675bf9b10cfd70dcbff 201 Gene3D G3DSA:1.20.144.10 3 172 4.0E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS03330 5af64047c8aee7a6845b647e42dc4d57 451 Gene3D G3DSA:3.30.1850.10 2 112 2.2E-54 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 LK04_RS03330 5af64047c8aee7a6845b647e42dc4d57 451 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 6.7E-47 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 LK04_RS03330 5af64047c8aee7a6845b647e42dc4d57 451 PANTHER PTHR31223 356 381 2.1E-180 T 22-04-2016 LK04_RS03330 5af64047c8aee7a6845b647e42dc4d57 451 PANTHER PTHR31223 83 339 2.1E-180 T 22-04-2016 LK04_RS03330 5af64047c8aee7a6845b647e42dc4d57 451 PANTHER PTHR31223:SF12 356 381 2.1E-180 T 22-04-2016 LK04_RS03330 5af64047c8aee7a6845b647e42dc4d57 451 PANTHER PTHR31223:SF12 83 339 2.1E-180 T 22-04-2016 LK04_RS03330 5af64047c8aee7a6845b647e42dc4d57 451 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 1.4E-56 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 LK04_RS03330 5af64047c8aee7a6845b647e42dc4d57 451 Gene3D G3DSA:3.40.50.450 122 449 1.8E-122 T 22-04-2016 LK04_RS03330 5af64047c8aee7a6845b647e42dc4d57 451 SUPERFAMILY SSF102405 118 327 1.68E-41 T 22-04-2016 LK04_RS03330 5af64047c8aee7a6845b647e42dc4d57 451 Pfam PF03641 Possible lysine decarboxylase 187 326 2.9E-33 T 22-04-2016 IPR031100 LOG family LK04_RS06080 4d55ba76e7c74001d6bc907fd70befd0 250 PANTHER PTHR22916 10 240 9.4E-33 T 22-04-2016 LK04_RS06080 4d55ba76e7c74001d6bc907fd70befd0 250 Pfam PF00535 Glycosyl transferase family 2 10 136 2.5E-29 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS06080 4d55ba76e7c74001d6bc907fd70befd0 250 SUPERFAMILY SSF53448 8 232 5.57E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06080 4d55ba76e7c74001d6bc907fd70befd0 250 Gene3D G3DSA:3.90.550.10 8 235 1.4E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS02205 32da208b2c8f312a663604df67084b4a 329 SUPERFAMILY SSF53850 26 316 1.63E-54 T 22-04-2016 LK04_RS02205 32da208b2c8f312a663604df67084b4a 329 PIRSF PIRSF002825 2 327 5.8E-50 T 22-04-2016 IPR026045 Ferric binding protein LK04_RS02205 32da208b2c8f312a663604df67084b4a 329 Gene3D G3DSA:3.40.190.10 262 313 1.8E-42 T 22-04-2016 LK04_RS02205 32da208b2c8f312a663604df67084b4a 329 Gene3D G3DSA:3.40.190.10 2 127 1.8E-42 T 22-04-2016 LK04_RS02205 32da208b2c8f312a663604df67084b4a 329 PANTHER PTHR30006:SF6 1 327 6.1E-40 T 22-04-2016 LK04_RS02205 32da208b2c8f312a663604df67084b4a 329 Gene3D G3DSA:3.40.190.10 130 261 1.3E-24 T 22-04-2016 LK04_RS02205 32da208b2c8f312a663604df67084b4a 329 Pfam PF13531 Bacterial extracellular solute-binding protein 39 282 7.6E-23 T 22-04-2016 LK04_RS02205 32da208b2c8f312a663604df67084b4a 329 PANTHER PTHR30006 1 327 6.1E-40 T 22-04-2016 LK04_RS00810 3084e926fa1d90a02e8a088a30070c1b 276 PANTHER PTHR10516 141 259 2.8E-51 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LK04_RS00810 3084e926fa1d90a02e8a088a30070c1b 276 Gene3D G3DSA:3.10.50.40 143 256 1.6E-44 T 22-04-2016 LK04_RS00810 3084e926fa1d90a02e8a088a30070c1b 276 Gene3D G3DSA:1.10.287.460 40 142 6.3E-43 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LK04_RS00810 3084e926fa1d90a02e8a088a30070c1b 276 SUPERFAMILY SSF54534 50 256 3.1E-65 T 22-04-2016 LK04_RS00810 3084e926fa1d90a02e8a088a30070c1b 276 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 39 159 1.1E-37 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LK04_RS00810 3084e926fa1d90a02e8a088a30070c1b 276 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 167 253 5.1E-28 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LK04_RS01120 9e0c7cb64ede7b786f3afc6544a790bb 392 PANTHER PTHR30085:SF1 2 171 2.6E-163 T 22-04-2016 LK04_RS01120 9e0c7cb64ede7b786f3afc6544a790bb 392 PANTHER PTHR30085:SF1 250 392 2.6E-163 T 22-04-2016 LK04_RS01120 9e0c7cb64ede7b786f3afc6544a790bb 392 SUPERFAMILY SSF161098 83 153 6.54E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS01120 9e0c7cb64ede7b786f3afc6544a790bb 392 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 82 146 2.5E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS01120 9e0c7cb64ede7b786f3afc6544a790bb 392 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 261 386 4.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS01120 9e0c7cb64ede7b786f3afc6544a790bb 392 Gene3D G3DSA:1.10.3720.10 184 387 4.1E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS01120 9e0c7cb64ede7b786f3afc6544a790bb 392 Gene3D G3DSA:1.10.3720.10 81 152 2.5E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS01120 9e0c7cb64ede7b786f3afc6544a790bb 392 PANTHER PTHR30085 2 171 2.6E-163 T 22-04-2016 LK04_RS01120 9e0c7cb64ede7b786f3afc6544a790bb 392 PANTHER PTHR30085 250 392 2.6E-163 T 22-04-2016 LK04_RS01120 9e0c7cb64ede7b786f3afc6544a790bb 392 SUPERFAMILY SSF161098 183 373 4.19E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14370 9e43a063ef866036b62d05159fb5a5e4 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 4.4E-26 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS14370 9e43a063ef866036b62d05159fb5a5e4 102 SUPERFAMILY SSF52794 1 101 2.17E-35 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS14370 9e43a063ef866036b62d05159fb5a5e4 102 PANTHER PTHR34581 3 100 5.2E-44 T 22-04-2016 LK04_RS14370 9e43a063ef866036b62d05159fb5a5e4 102 Gene3D G3DSA:3.40.50.270 1 101 6.4E-39 T 22-04-2016 LK04_RS14370 9e43a063ef866036b62d05159fb5a5e4 102 PANTHER PTHR34581:SF2 3 100 5.2E-44 T 22-04-2016 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 341 3.0E-7 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 PANTHER PTHR11076 1 347 9.5E-209 T 22-04-2016 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 SUPERFAMILY SSF56672 1 234 3.83E-94 T 22-04-2016 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 SUPERFAMILY SSF100879 241 349 1.04E-25 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 Gene3D G3DSA:1.10.150.20 165 237 6.5E-25 T 22-04-2016 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 36.897 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 Pfam PF00817 impB/mucB/samB family 7 154 5.7E-49 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 Pfam PF11798 IMS family HHH motif 170 197 1.3E-5 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 PANTHER PTHR11076:SF32 1 347 9.5E-209 T 22-04-2016 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 Gene3D G3DSA:3.30.1490.100 238 350 7.1E-42 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS14610 c49f61cdaafea1a4ec25039e858af769 351 Gene3D G3DSA:3.30.70.270 66 164 1.4E-34 T 22-04-2016 LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 PANTHER PTHR10210:SF41 1 312 1.9E-188 T 22-04-2016 LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 SUPERFAMILY SSF53271 66 303 2.74E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 126 141 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 Gene3D G3DSA:3.40.50.2020 157 282 1.1E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 Gene3D G3DSA:3.40.50.2020 1 156 5.6E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 2.3E-127 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 SMART SM01400 1 118 5.7E-76 T 22-04-2016 LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 PANTHER PTHR10210 1 312 1.9E-188 T 22-04-2016 LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 310 4.8E-30 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 118 2.0E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LK04_RS07200 ed96e91efefb6e8f43a4efe44729490f 312 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 311 49.692 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 SUPERFAMILY SSF141371 552 644 6.87E-6 T 22-04-2016 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 Pfam PF03552 Cellulose synthase 302 516 7.9E-10 T 22-04-2016 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 SUPERFAMILY SSF53448 129 409 6.28E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 Pfam PF00535 Glycosyl transferase family 2 130 301 8.1E-36 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 Pfam PF07238 PilZ domain 550 644 1.1E-5 T 22-04-2016 IPR009875 PilZ domain GO:0035438 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PANTHER PTHR10587 33 568 3.3E-85 T 22-04-2016 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 5 674 3.6E-264 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 Gene3D G3DSA:3.90.550.10 127 362 9.4E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PANTHER PTHR10587:SF94 33 568 3.3E-85 T 22-04-2016 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PRINTS PR01439 Cellulose synthase subunit A signature 407 426 3.8E-60 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PRINTS PR01439 Cellulose synthase subunit A signature 447 466 3.8E-60 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PRINTS PR01439 Cellulose synthase subunit A signature 136 155 3.8E-60 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PRINTS PR01439 Cellulose synthase subunit A signature 378 404 3.8E-60 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PRINTS PR01439 Cellulose synthase subunit A signature 53 73 3.8E-60 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PRINTS PR01439 Cellulose synthase subunit A signature 487 511 3.8E-60 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PRINTS PR01439 Cellulose synthase subunit A signature 81 106 3.8E-60 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PRINTS PR01439 Cellulose synthase subunit A signature 523 544 3.8E-60 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS18315 7a238feef1655b8a53964b3fc909991d 701 PRINTS PR01439 Cellulose synthase subunit A signature 217 241 3.8E-60 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LK04_RS14480 a3b01d190dfb3d28a6ff37eb89a460b8 246 Gene3D G3DSA:3.40.50.2300 6 129 5.4E-42 T 22-04-2016 LK04_RS14480 a3b01d190dfb3d28a6ff37eb89a460b8 246 SUPERFAMILY SSF46894 140 236 1.36E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS14480 a3b01d190dfb3d28a6ff37eb89a460b8 246 Gene3D G3DSA:1.10.10.10 138 237 2.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14480 a3b01d190dfb3d28a6ff37eb89a460b8 246 SUPERFAMILY SSF52172 6 135 1.08E-42 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS14480 a3b01d190dfb3d28a6ff37eb89a460b8 246 PANTHER PTHR26402 5 239 6.7E-98 T 22-04-2016 LK04_RS14480 a3b01d190dfb3d28a6ff37eb89a460b8 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 235 9.6E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS14480 a3b01d190dfb3d28a6ff37eb89a460b8 246 SMART SM00862 159 235 1.6E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS14480 a3b01d190dfb3d28a6ff37eb89a460b8 246 Pfam PF00072 Response regulator receiver domain 7 118 2.8E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS14480 a3b01d190dfb3d28a6ff37eb89a460b8 246 PANTHER PTHR26402:SF528 5 239 6.7E-98 T 22-04-2016 LK04_RS14480 a3b01d190dfb3d28a6ff37eb89a460b8 246 SMART SM00448 5 117 8.0E-43 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS17505 44b0a3d4f6920e884d541ec02be61202 328 PANTHER PTHR30489 30 327 6.6E-55 T 22-04-2016 LK04_RS17505 44b0a3d4f6920e884d541ec02be61202 328 Pfam PF02687 FtsX-like permease family 204 318 1.3E-10 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LK04_RS17505 44b0a3d4f6920e884d541ec02be61202 328 PIRSF PIRSF003097 27 324 2.9E-95 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 LK04_RS17505 44b0a3d4f6920e884d541ec02be61202 328 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 28 327 1.4E-133 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 LK04_RS01310 2010d58de767fbe34302a95f4e09bc96 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS01310 2010d58de767fbe34302a95f4e09bc96 379 PANTHER PTHR30002 2 371 3.8E-210 T 22-04-2016 LK04_RS01310 2010d58de767fbe34302a95f4e09bc96 379 SUPERFAMILY SSF54862 169 320 2.68E-18 T 22-04-2016 LK04_RS01310 2010d58de767fbe34302a95f4e09bc96 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 3.9E-153 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS01310 2010d58de767fbe34302a95f4e09bc96 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 2.9E-24 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS01310 2010d58de767fbe34302a95f4e09bc96 379 Pfam PF13484 4Fe-4S double cluster binding domain 192 256 3.1E-19 T 22-04-2016 LK04_RS01310 2010d58de767fbe34302a95f4e09bc96 379 PANTHER PTHR30002:SF4 2 371 3.8E-210 T 22-04-2016 LK04_RS01310 2010d58de767fbe34302a95f4e09bc96 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.834 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS01310 2010d58de767fbe34302a95f4e09bc96 379 Gene3D G3DSA:3.30.70.20 189 256 5.6E-6 T 22-04-2016 LK04_RS06275 6e7953c70957e1b953ac344ae24a2f07 471 PANTHER PTHR20852:SF7 2 468 7.4E-117 T 22-04-2016 LK04_RS06275 6e7953c70957e1b953ac344ae24a2f07 471 SMART SM01230 132 389 5.1E-94 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS06275 6e7953c70957e1b953ac344ae24a2f07 471 Gene3D G3DSA:3.10.20.70 26 135 1.0E-9 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS06275 6e7953c70957e1b953ac344ae24a2f07 471 Pfam PF00120 Glutamine synthetase, catalytic domain 133 466 8.0E-100 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS06275 6e7953c70957e1b953ac344ae24a2f07 471 PANTHER PTHR20852 2 468 7.4E-117 T 22-04-2016 LK04_RS06275 6e7953c70957e1b953ac344ae24a2f07 471 SUPERFAMILY SSF54368 26 131 5.23E-9 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS06275 6e7953c70957e1b953ac344ae24a2f07 471 SUPERFAMILY SSF55931 133 468 1.44E-98 T 22-04-2016 LK04_RS06275 6e7953c70957e1b953ac344ae24a2f07 471 Gene3D G3DSA:3.30.590.10 136 457 5.3E-90 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 LK04_RS06275 6e7953c70957e1b953ac344ae24a2f07 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 270 285 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 516 656 2.0E-56 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 438 514 1.4E-18 T 22-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 Gene3D G3DSA:1.10.8.60 167 242 3.4E-34 T 22-04-2016 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 Gene3D G3DSA:1.20.272.10 243 362 4.0E-47 T 22-04-2016 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 SMART SM00382 37 178 5.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 PANTHER PTHR11669:SF0 1 413 3.4E-182 T 22-04-2016 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 SUPERFAMILY SSF52540 35 222 7.63E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 SUPERFAMILY SSF48019 243 367 3.74E-34 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 1.7E-135 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 Gene3D G3DSA:3.40.50.300 15 166 6.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 364 1.5E-32 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.0E-42 T 22-04-2016 LK04_RS13810 bb3147a45e1e0da0ea5458a1722653ba 659 PANTHER PTHR11669 1 413 3.4E-182 T 22-04-2016 LK04_RS15040 cf58e0921322be445a0bb41519b2f59f 267 Pfam PF01497 Periplasmic binding protein 23 221 4.8E-22 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LK04_RS15040 cf58e0921322be445a0bb41519b2f59f 267 Gene3D G3DSA:3.40.50.1980 141 261 2.6E-33 T 22-04-2016 LK04_RS15040 cf58e0921322be445a0bb41519b2f59f 267 PANTHER PTHR30535 22 261 5.0E-47 T 22-04-2016 LK04_RS15040 cf58e0921322be445a0bb41519b2f59f 267 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 263 44.206 T 22-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 LK04_RS15040 cf58e0921322be445a0bb41519b2f59f 267 Gene3D G3DSA:3.40.50.1980 21 134 1.9E-28 T 22-04-2016 LK04_RS15040 cf58e0921322be445a0bb41519b2f59f 267 SUPERFAMILY SSF53807 21 261 3.3E-52 T 22-04-2016 LK04_RS17260 5e77536fcc4011f788cac252bb752656 175 PANTHER PTHR11080 7 174 1.4E-23 T 22-04-2016 LK04_RS17260 5e77536fcc4011f788cac252bb752656 175 Pfam PF00857 Isochorismatase family 5 139 9.0E-26 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS17260 5e77536fcc4011f788cac252bb752656 175 Gene3D G3DSA:3.40.50.850 2 143 4.9E-34 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS17260 5e77536fcc4011f788cac252bb752656 175 SUPERFAMILY SSF52499 2 154 1.15E-37 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS12290 050bc60621852ac9742ed580024640b2 83 Pfam PF07214 Protein of unknown function (DUF1418) 1 80 2.1E-22 T 22-04-2016 IPR010815 Protein of unknown function DUF1418 LK04_RS09445 a8230fcbbdf9dd80b099cd07615210b8 167 Gene3D G3DSA:3.40.30.10 22 153 3.0E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS09445 a8230fcbbdf9dd80b099cd07615210b8 167 SUPERFAMILY SSF52833 42 150 3.02E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS09445 a8230fcbbdf9dd80b099cd07615210b8 167 Pfam PF08534 Redoxin 47 147 1.3E-10 T 22-04-2016 IPR013740 Redoxin GO:0016491 LK04_RS09445 a8230fcbbdf9dd80b099cd07615210b8 167 PANTHER PTHR10681 44 152 4.4E-19 T 22-04-2016 LK04_RS09445 a8230fcbbdf9dd80b099cd07615210b8 167 PANTHER PTHR10681:SF106 44 152 4.4E-19 T 22-04-2016 LK04_RS03840 fea41bef3bdaf12b930385059ddbd5d1 469 Pfam PF00324 Amino acid permease 20 459 1.3E-116 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LK04_RS03840 fea41bef3bdaf12b930385059ddbd5d1 469 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LK04_RS03840 fea41bef3bdaf12b930385059ddbd5d1 469 PANTHER PTHR11785:SF399 8 463 3.0E-277 T 22-04-2016 LK04_RS03840 fea41bef3bdaf12b930385059ddbd5d1 469 PIRSF PIRSF006060 1 468 1.3E-82 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS03840 fea41bef3bdaf12b930385059ddbd5d1 469 PANTHER PTHR11785 8 463 3.0E-277 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS00115 78ca3799ceec9d78e42011f4dfd388dd 342 PANTHER PTHR11695 15 340 2.8E-111 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS00115 78ca3799ceec9d78e42011f4dfd388dd 342 PANTHER PTHR11695:SF38 15 340 2.8E-111 T 22-04-2016 LK04_RS00115 78ca3799ceec9d78e42011f4dfd388dd 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 133 8.4E-33 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LK04_RS00115 78ca3799ceec9d78e42011f4dfd388dd 342 Gene3D G3DSA:3.40.50.720 166 284 2.5E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00115 78ca3799ceec9d78e42011f4dfd388dd 342 Gene3D G3DSA:3.90.180.10 2 165 1.4E-55 T 22-04-2016 IPR011032 GroES-like LK04_RS00115 78ca3799ceec9d78e42011f4dfd388dd 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LK04_RS00115 78ca3799ceec9d78e42011f4dfd388dd 342 SMART SM00829 10 338 0.0033 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS00115 78ca3799ceec9d78e42011f4dfd388dd 342 Pfam PF00107 Zinc-binding dehydrogenase 173 300 4.6E-21 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS00115 78ca3799ceec9d78e42011f4dfd388dd 342 SUPERFAMILY SSF50129 2 172 1.13E-51 T 22-04-2016 IPR011032 GroES-like LK04_RS00115 78ca3799ceec9d78e42011f4dfd388dd 342 SUPERFAMILY SSF51735 140 308 4.64E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06680 4e66a5708d8dca7e71aa0da13fdea926 256 Pfam PF12706 Beta-lactamase superfamily domain 48 219 7.4E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS06680 4e66a5708d8dca7e71aa0da13fdea926 256 Gene3D G3DSA:3.60.15.10 1 248 6.2E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS06680 4e66a5708d8dca7e71aa0da13fdea926 256 SMART SM00849 36 197 0.005 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS06680 4e66a5708d8dca7e71aa0da13fdea926 256 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 245 4.0E-109 T 22-04-2016 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 LK04_RS06680 4e66a5708d8dca7e71aa0da13fdea926 256 PANTHER PTHR12553 1 248 1.7E-39 T 22-04-2016 LK04_RS06680 4e66a5708d8dca7e71aa0da13fdea926 256 PANTHER PTHR12553:SF7 1 248 1.7E-39 T 22-04-2016 LK04_RS06680 4e66a5708d8dca7e71aa0da13fdea926 256 SUPERFAMILY SSF56281 1 246 4.18E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS11485 e52149393faae0ed118fc48e2041a296 191 Pfam PF04264 YceI-like domain 28 186 4.0E-39 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LK04_RS11485 e52149393faae0ed118fc48e2041a296 191 PANTHER PTHR34406 1 191 3.7E-59 T 22-04-2016 LK04_RS11485 e52149393faae0ed118fc48e2041a296 191 Gene3D G3DSA:2.40.128.110 23 191 5.6E-59 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LK04_RS11485 e52149393faae0ed118fc48e2041a296 191 PANTHER PTHR34406:SF1 1 191 3.7E-59 T 22-04-2016 LK04_RS11485 e52149393faae0ed118fc48e2041a296 191 SUPERFAMILY SSF101874 23 191 3.92E-53 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LK04_RS11485 e52149393faae0ed118fc48e2041a296 191 SMART SM00867 25 189 8.4E-69 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LK04_RS11020 1b7733de7cce3a84a3a91aa545bffdb9 366 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 337 4.5E-48 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS11020 1b7733de7cce3a84a3a91aa545bffdb9 366 PANTHER PTHR32196:SF21 17 361 3.2E-132 T 22-04-2016 LK04_RS11020 1b7733de7cce3a84a3a91aa545bffdb9 366 PANTHER PTHR32196 17 361 3.2E-132 T 22-04-2016 LK04_RS03620 bedd768fcaa25f2c140d671b47c8a27d 142 PANTHER PTHR30353:SF12 9 141 1.5E-47 T 22-04-2016 LK04_RS03620 bedd768fcaa25f2c140d671b47c8a27d 142 PANTHER PTHR30353 9 141 1.5E-47 T 22-04-2016 IPR032818 DedA family LK04_RS01455 dbb51601b8bdd332c3327d1b4d0459de 68 Gene3D G3DSA:3.30.1910.10 1 64 2.5E-37 T 22-04-2016 LK04_RS01455 dbb51601b8bdd332c3327d1b4d0459de 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 4.0E-27 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 LK04_RS01455 dbb51601b8bdd332c3327d1b4d0459de 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 6.0E-31 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 LK04_RS19515 21459adfd63fd1ae25b33f6181f15d67 157 SUPERFAMILY SSF75217 1 152 4.71E-45 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LK04_RS19515 21459adfd63fd1ae25b33f6181f15d67 157 PANTHER PTHR12029 1 157 9.3E-83 T 22-04-2016 LK04_RS19515 21459adfd63fd1ae25b33f6181f15d67 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 1.5E-71 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LK04_RS19515 21459adfd63fd1ae25b33f6181f15d67 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 7.6E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LK04_RS19515 21459adfd63fd1ae25b33f6181f15d67 157 PANTHER PTHR12029:SF31 1 157 9.3E-83 T 22-04-2016 LK04_RS19515 21459adfd63fd1ae25b33f6181f15d67 157 Gene3D G3DSA:3.40.1280.10 1 153 3.9E-70 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LK04_RS19515 21459adfd63fd1ae25b33f6181f15d67 157 PIRSF PIRSF029256 1 154 1.3E-70 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LK04_RS19515 21459adfd63fd1ae25b33f6181f15d67 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.645 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LK04_RS12580 f3fe0a28e460c2a083470fab6d8b26d4 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.6E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS12580 f3fe0a28e460c2a083470fab6d8b26d4 298 Gene3D G3DSA:1.10.10.10 5 86 3.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12580 f3fe0a28e460c2a083470fab6d8b26d4 298 Gene3D G3DSA:3.40.190.10 92 202 1.1E-19 T 22-04-2016 LK04_RS12580 f3fe0a28e460c2a083470fab6d8b26d4 298 Pfam PF03466 LysR substrate binding domain 92 289 1.1E-32 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS12580 f3fe0a28e460c2a083470fab6d8b26d4 298 SUPERFAMILY SSF46785 6 90 2.35E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12580 f3fe0a28e460c2a083470fab6d8b26d4 298 PANTHER PTHR30126 5 294 2.1E-90 T 22-04-2016 LK04_RS12580 f3fe0a28e460c2a083470fab6d8b26d4 298 PANTHER PTHR30126:SF16 5 294 2.1E-90 T 22-04-2016 LK04_RS12580 f3fe0a28e460c2a083470fab6d8b26d4 298 SUPERFAMILY SSF53850 92 292 2.17E-33 T 22-04-2016 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 PANTHER PTHR11080:SF4 6 261 1.2E-145 T 22-04-2016 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 Gene3D G3DSA:1.10.1200.10 229 280 1.3E-4 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 Pfam PF00857 Isochorismatase family 32 205 1.8E-39 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 Gene3D G3DSA:3.40.50.850 1 228 1.0E-75 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 PANTHER PTHR11080 6 261 1.2E-145 T 22-04-2016 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 PRINTS PR01398 Isochorismatase signature 63 80 3.9E-49 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 PRINTS PR01398 Isochorismatase signature 168 186 3.9E-49 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 PRINTS PR01398 Isochorismatase signature 112 134 3.9E-49 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 PRINTS PR01398 Isochorismatase signature 186 203 3.9E-49 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 PRINTS PR01398 Isochorismatase signature 80 99 3.9E-49 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 PRINTS PR01398 Isochorismatase signature 2 14 3.9E-49 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 SUPERFAMILY SSF52499 1 207 1.06E-64 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 Pfam PF00550 Phosphopantetheine attachment site 215 273 5.0E-6 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 SUPERFAMILY SSF47336 214 278 4.06E-6 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS16525 ebd41ef2f13620e9f4e1e78d337e1b98 284 PIRSF PIRSF001111 1 284 1.1E-129 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 LK04_RS09095 710ae2cf5637ec83c81e6b87fc70cb76 285 SUPERFAMILY SSF51735 6 123 8.72E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09095 710ae2cf5637ec83c81e6b87fc70cb76 285 Gene3D G3DSA:1.10.3640.10 178 279 5.6E-44 T 22-04-2016 LK04_RS09095 710ae2cf5637ec83c81e6b87fc70cb76 285 Pfam PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term 126 278 6.9E-59 T 22-04-2016 IPR031663 Phosphogluconate dehydrogenase (decarboxylating) , C-terminal LK04_RS09095 710ae2cf5637ec83c81e6b87fc70cb76 285 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 92 8.7E-7 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LK04_RS09095 710ae2cf5637ec83c81e6b87fc70cb76 285 Gene3D G3DSA:3.40.50.720 6 175 2.9E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07370 a3123c76d963487bba037cd3b53273e6 365 PANTHER PTHR11496:SF57 5 363 2.3E-152 T 22-04-2016 LK04_RS07370 a3123c76d963487bba037cd3b53273e6 365 Gene3D G3DSA:1.20.1090.10 161 363 2.5E-61 T 22-04-2016 LK04_RS07370 a3123c76d963487bba037cd3b53273e6 365 PIRSF PIRSF000112 1 363 1.5E-98 T 22-04-2016 LK04_RS07370 a3123c76d963487bba037cd3b53273e6 365 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 326 2.6E-63 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 LK04_RS07370 a3123c76d963487bba037cd3b53273e6 365 SUPERFAMILY SSF56796 2 358 5.63E-89 T 22-04-2016 LK04_RS07370 a3123c76d963487bba037cd3b53273e6 365 Gene3D G3DSA:3.40.50.1970 2 159 4.4E-44 T 22-04-2016 LK04_RS07370 a3123c76d963487bba037cd3b53273e6 365 PANTHER PTHR11496 5 363 2.3E-152 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 PANTHER PTHR30582:SF10 300 419 1.4E-234 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 PANTHER PTHR30582:SF10 22 228 1.4E-234 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 PANTHER PTHR30582:SF10 456 601 1.4E-234 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 Pfam PF01471 Putative peptidoglycan binding domain 301 335 1.1E-5 T 22-04-2016 IPR002477 Peptidoglycan binding-like LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 SUPERFAMILY SSF47090 298 343 4.47E-9 T 22-04-2016 IPR002477 Peptidoglycan binding-like LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 Gene3D G3DSA:2.40.440.10 357 406 9.1E-14 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 Gene3D G3DSA:2.40.440.10 474 522 9.1E-14 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 SUPERFAMILY SSF141523 472 521 9.94E-20 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 SUPERFAMILY SSF141523 364 415 9.94E-20 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 Pfam PF03734 L,D-transpeptidase catalytic domain 363 531 1.1E-29 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 PANTHER PTHR30582 300 419 1.4E-234 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 PANTHER PTHR30582 22 228 1.4E-234 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 PANTHER PTHR30582 456 601 1.4E-234 T 22-04-2016 LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 Gene3D G3DSA:1.10.101.10 209 244 2.7E-19 T 22-04-2016 IPR002477 Peptidoglycan binding-like LK04_RS12000 0a3796d231cddd0dec0b7c2b3d20a830 603 Gene3D G3DSA:1.10.101.10 301 344 2.7E-19 T 22-04-2016 IPR002477 Peptidoglycan binding-like LK04_RS13195 e0a283c20b48e80a79c798d551bc6472 254 Gene3D G3DSA:3.40.50.1820 9 253 1.6E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS13195 e0a283c20b48e80a79c798d551bc6472 254 PANTHER PTHR10992:SF768 13 254 4.8E-71 T 22-04-2016 LK04_RS13195 e0a283c20b48e80a79c798d551bc6472 254 PANTHER PTHR10992 13 254 4.8E-71 T 22-04-2016 LK04_RS13195 e0a283c20b48e80a79c798d551bc6472 254 SUPERFAMILY SSF53474 11 253 4.19E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS13195 e0a283c20b48e80a79c798d551bc6472 254 Pfam PF12697 Alpha/beta hydrolase family 19 246 1.9E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS13195 e0a283c20b48e80a79c798d551bc6472 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 3.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS13195 e0a283c20b48e80a79c798d551bc6472 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 3.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS07850 d4d61a834f0d44d4fa054b637a22f262 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 22-04-2016 IPR019897 RidA, conserved site LK04_RS07850 d4d61a834f0d44d4fa054b637a22f262 114 SUPERFAMILY SSF55298 2 113 1.88E-28 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LK04_RS07850 d4d61a834f0d44d4fa054b637a22f262 114 Gene3D G3DSA:3.30.1330.40 6 113 4.0E-22 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LK04_RS07850 d4d61a834f0d44d4fa054b637a22f262 114 PANTHER PTHR11803 1 114 6.9E-33 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family LK04_RS07850 d4d61a834f0d44d4fa054b637a22f262 114 Pfam PF01042 Endoribonuclease L-PSP 3 113 2.0E-24 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family LK04_RS07850 d4d61a834f0d44d4fa054b637a22f262 114 PANTHER PTHR11803:SF17 1 114 6.9E-33 T 22-04-2016 LK04_RS00655 835a612916ddd39c7d2ebd9a5319d95a 227 Gene3D G3DSA:3.20.20.70 1 222 2.8E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS00655 835a612916ddd39c7d2ebd9a5319d95a 227 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 7.5E-95 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LK04_RS00655 835a612916ddd39c7d2ebd9a5319d95a 227 PANTHER PTHR11749 2 223 1.6E-140 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LK04_RS00655 835a612916ddd39c7d2ebd9a5319d95a 227 PANTHER PTHR11749:SF7 2 223 1.6E-140 T 22-04-2016 LK04_RS00655 835a612916ddd39c7d2ebd9a5319d95a 227 PIRSF PIRSF001461 1 226 1.0E-103 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LK04_RS00655 835a612916ddd39c7d2ebd9a5319d95a 227 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LK04_RS00655 835a612916ddd39c7d2ebd9a5319d95a 227 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 5.2E-89 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LK04_RS00655 835a612916ddd39c7d2ebd9a5319d95a 227 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LK04_RS00655 835a612916ddd39c7d2ebd9a5319d95a 227 SUPERFAMILY SSF51366 3 218 1.88E-74 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LK04_RS18845 f0856e92a018c0ec490789b848cdecee 301 Pfam PF00892 EamA-like transporter family 6 131 4.8E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS18845 f0856e92a018c0ec490789b848cdecee 301 Pfam PF00892 EamA-like transporter family 148 288 2.5E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS18845 f0856e92a018c0ec490789b848cdecee 301 PANTHER PTHR32322 4 290 7.9E-90 T 22-04-2016 LK04_RS18845 f0856e92a018c0ec490789b848cdecee 301 SUPERFAMILY SSF103481 184 292 1.44E-10 T 22-04-2016 LK04_RS18845 f0856e92a018c0ec490789b848cdecee 301 PANTHER PTHR32322:SF9 4 290 7.9E-90 T 22-04-2016 LK04_RS18845 f0856e92a018c0ec490789b848cdecee 301 SUPERFAMILY SSF103481 42 134 4.32E-11 T 22-04-2016 LK04_RS04350 ead186717484a102038832e68828e4c7 115 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 2 115 1.9E-51 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 LK04_RS04350 ead186717484a102038832e68828e4c7 115 PANTHER PTHR30041:SF4 2 115 7.9E-64 T 22-04-2016 LK04_RS04350 ead186717484a102038832e68828e4c7 115 PANTHER PTHR30041 2 115 7.9E-64 T 22-04-2016 LK04_RS04350 ead186717484a102038832e68828e4c7 115 Pfam PF03960 ArsC family 5 114 3.1E-22 T 22-04-2016 IPR006660 Arsenate reductase-like LK04_RS04350 ead186717484a102038832e68828e4c7 115 Gene3D G3DSA:3.40.30.10 1 115 1.3E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS04350 ead186717484a102038832e68828e4c7 115 SUPERFAMILY SSF52833 1 115 3.25E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS11835 bbb4f1b5f304449478ce683fdd8623a4 153 Gene3D G3DSA:3.40.50.1380 4 151 1.7E-65 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS11835 bbb4f1b5f304449478ce683fdd8623a4 153 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 38.679 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 LK04_RS11835 bbb4f1b5f304449478ce683fdd8623a4 153 SMART SM00851 25 118 6.1E-25 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS11835 bbb4f1b5f304449478ce683fdd8623a4 153 SUPERFAMILY SSF52335 4 151 6.15E-58 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS11835 bbb4f1b5f304449478ce683fdd8623a4 153 PIRSF PIRSF006614 8 151 3.7E-66 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 LK04_RS11835 bbb4f1b5f304449478ce683fdd8623a4 153 PANTHER PTHR30492 2 151 1.1E-88 T 22-04-2016 LK04_RS11835 bbb4f1b5f304449478ce683fdd8623a4 153 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 LK04_RS11835 bbb4f1b5f304449478ce683fdd8623a4 153 Pfam PF02142 MGS-like domain 26 118 1.1E-17 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LK04_RS11835 bbb4f1b5f304449478ce683fdd8623a4 153 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.9E-69 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 LK04_RS06050 495d779b3b335710345d258f826711c6 521 Pfam PF03741 Integral membrane protein TerC family 15 204 2.0E-47 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 LK04_RS06050 495d779b3b335710345d258f826711c6 521 SMART SM01091 438 517 2.9E-21 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS06050 495d779b3b335710345d258f826711c6 521 PANTHER PTHR22777:SF14 1 515 2.5E-288 T 22-04-2016 LK04_RS06050 495d779b3b335710345d258f826711c6 521 Gene3D G3DSA:3.10.580.10 289 414 5.1E-13 T 22-04-2016 LK04_RS06050 495d779b3b335710345d258f826711c6 521 Pfam PF03471 Transporter associated domain 440 514 5.9E-18 T 22-04-2016 IPR005170 Transporter-associated domain LK04_RS06050 495d779b3b335710345d258f826711c6 521 Pfam PF00571 CBS domain 372 421 3.6E-8 T 22-04-2016 IPR000644 CBS domain LK04_RS06050 495d779b3b335710345d258f826711c6 521 Gene3D G3DSA:3.30.465.10 415 514 1.7E-23 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS06050 495d779b3b335710345d258f826711c6 521 SUPERFAMILY SSF54631 291 423 2.68E-23 T 22-04-2016 LK04_RS06050 495d779b3b335710345d258f826711c6 521 SUPERFAMILY SSF56176 436 518 1.88E-18 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS06050 495d779b3b335710345d258f826711c6 521 PANTHER PTHR22777 1 515 2.5E-288 T 22-04-2016 LK04_RS14620 e3ec1f39d92612740eda34b01718ecb1 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 1.5E-115 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 LK04_RS14620 e3ec1f39d92612740eda34b01718ecb1 255 SUPERFAMILY SSF56235 2 252 8.59E-52 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS14620 e3ec1f39d92612740eda34b01718ecb1 255 PANTHER PTHR11907:SF10 1 255 1.3E-130 T 22-04-2016 LK04_RS14620 e3ec1f39d92612740eda34b01718ecb1 255 PANTHER PTHR11907 1 255 1.3E-130 T 22-04-2016 LK04_RS14620 e3ec1f39d92612740eda34b01718ecb1 255 Gene3D G3DSA:3.60.20.10 1 248 8.4E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS11225 94682d1f482060a2bd9c47fa5814c134 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 51.187 T 22-04-2016 IPR022987 Uncharacterised protein family UPF0227 LK04_RS11225 94682d1f482060a2bd9c47fa5814c134 180 PANTHER PTHR35602:SF2 1 179 3.3E-128 T 22-04-2016 LK04_RS11225 94682d1f482060a2bd9c47fa5814c134 180 SUPERFAMILY SSF53474 2 176 2.35E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS11225 94682d1f482060a2bd9c47fa5814c134 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 6.5E-68 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA LK04_RS11225 94682d1f482060a2bd9c47fa5814c134 180 PANTHER PTHR35602 1 179 3.3E-128 T 22-04-2016 LK04_RS15250 513d4bc45a451cc421167e0025223298 180 SMART SM00972 118 177 5.2E-18 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS15250 513d4bc45a451cc421167e0025223298 180 Pfam PF05229 Spore Coat Protein U domain 29 177 1.7E-29 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS15250 513d4bc45a451cc421167e0025223298 180 PANTHER PTHR37089:SF2 13 180 6.0E-34 T 22-04-2016 LK04_RS15250 513d4bc45a451cc421167e0025223298 180 PANTHER PTHR37089 13 180 6.0E-34 T 22-04-2016 LK04_RS19840 f5f6843b67de821408196433165b1a16 195 Pfam PF01810 LysE type translocator 12 182 1.1E-14 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS19840 f5f6843b67de821408196433165b1a16 195 PANTHER PTHR30086:SF12 5 195 2.0E-38 T 22-04-2016 LK04_RS19840 f5f6843b67de821408196433165b1a16 195 PANTHER PTHR30086 5 195 2.0E-38 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS10705 edc85eed1addbf53932a7825cf359a52 262 PANTHER PTHR10788:SF42 9 252 6.0E-91 T 22-04-2016 LK04_RS10705 edc85eed1addbf53932a7825cf359a52 262 PANTHER PTHR10788 9 252 6.0E-91 T 22-04-2016 LK04_RS10705 edc85eed1addbf53932a7825cf359a52 262 Gene3D G3DSA:3.40.50.1000 169 251 7.6E-44 T 22-04-2016 IPR023214 HAD-like domain LK04_RS10705 edc85eed1addbf53932a7825cf359a52 262 Gene3D G3DSA:3.40.50.1000 20 94 7.6E-44 T 22-04-2016 IPR023214 HAD-like domain LK04_RS10705 edc85eed1addbf53932a7825cf359a52 262 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 209 3.7E-17 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LK04_RS10705 edc85eed1addbf53932a7825cf359a52 262 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 19 247 8.7E-59 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 LK04_RS10705 edc85eed1addbf53932a7825cf359a52 262 SUPERFAMILY SSF56784 20 249 5.78E-42 T 22-04-2016 IPR023214 HAD-like domain LK04_RS10705 edc85eed1addbf53932a7825cf359a52 262 Pfam PF02358 Trehalose-phosphatase 22 236 6.6E-46 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 LK04_RS18815 3ca4cc4dd7d3c4d98b308c610988385d 205 PANTHER PTHR30246:SF1 1 205 5.6E-69 T 22-04-2016 LK04_RS18815 3ca4cc4dd7d3c4d98b308c610988385d 205 Gene3D G3DSA:3.20.20.70 3 202 4.2E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS18815 3ca4cc4dd7d3c4d98b308c610988385d 205 Pfam PF01081 KDPG and KHG aldolase 5 182 9.7E-25 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LK04_RS18815 3ca4cc4dd7d3c4d98b308c610988385d 205 PANTHER PTHR30246 1 205 5.6E-69 T 22-04-2016 LK04_RS18815 3ca4cc4dd7d3c4d98b308c610988385d 205 SUPERFAMILY SSF51569 3 203 1.06E-53 T 22-04-2016 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.542 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 3.4E-149 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 SUPERFAMILY SSF55681 8 292 2.29E-133 T 22-04-2016 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 Gene3D G3DSA:1.20.58.180 215 298 7.6E-37 T 22-04-2016 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 1.3E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 1.3E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 1.3E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 1.3E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 1.3E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 1.3E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 5.0E-176 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 PANTHER PTHR30075 1 302 4.3E-278 T 22-04-2016 LK04_RS18570 6da0253a1315172183e589709c5baa6e 303 Gene3D G3DSA:3.30.930.10 4 213 2.3E-105 T 22-04-2016 LK04_RS18885 17bf4e9b23a47c3b10c5febf312d4f68 324 Gene3D G3DSA:3.40.50.720 2 113 1.5E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18885 17bf4e9b23a47c3b10c5febf312d4f68 324 PANTHER PTHR10996:SF118 1 322 3.9E-144 T 22-04-2016 LK04_RS18885 17bf4e9b23a47c3b10c5febf312d4f68 324 SUPERFAMILY SSF51735 100 288 9.72E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18885 17bf4e9b23a47c3b10c5febf312d4f68 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 319 2.4E-24 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LK04_RS18885 17bf4e9b23a47c3b10c5febf312d4f68 324 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 64.78 T 22-04-2016 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 LK04_RS18885 17bf4e9b23a47c3b10c5febf312d4f68 324 SUPERFAMILY SSF52283 1 134 1.13E-27 T 22-04-2016 LK04_RS18885 17bf4e9b23a47c3b10c5febf312d4f68 324 Gene3D G3DSA:3.40.50.720 114 287 5.2E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS18885 17bf4e9b23a47c3b10c5febf312d4f68 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 6.4E-63 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS18885 17bf4e9b23a47c3b10c5febf312d4f68 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LK04_RS18885 17bf4e9b23a47c3b10c5febf312d4f68 324 PANTHER PTHR10996 1 322 3.9E-144 T 22-04-2016 LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 SUPERFAMILY SSF52540 7 228 1.28E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 SUPERFAMILY SSF52540 1117 1199 1.28E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1102 1181 4.7E-16 T 22-04-2016 LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 Gene3D G3DSA:3.40.50.300 1 164 4.9E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 Gene3D G3DSA:3.40.1140.10 1100 1200 2.0E-7 T 22-04-2016 LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 PANTHER PTHR32114 2 493 4.9E-106 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 PANTHER PTHR32114 819 1224 4.9E-106 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 PANTHER PTHR32114 519 731 4.9E-106 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 PANTHER PTHR32114:SF2 2 493 4.9E-106 T 22-04-2016 LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 PANTHER PTHR32114:SF2 819 1224 4.9E-106 T 22-04-2016 LK04_RS14210 f520963630d4f04d3edcf33f87c0c871 1225 PANTHER PTHR32114:SF2 519 731 4.9E-106 T 22-04-2016 LK04_RS12620 1b319f5ca87d2b3c8a627b7954ea8c3e 292 PANTHER PTHR30450:SF2 54 292 1.5E-126 T 22-04-2016 LK04_RS12620 1b319f5ca87d2b3c8a627b7954ea8c3e 292 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 70 179 1.2E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS12620 1b319f5ca87d2b3c8a627b7954ea8c3e 292 SUPERFAMILY SSF161098 71 270 7.85E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12620 1b319f5ca87d2b3c8a627b7954ea8c3e 292 PANTHER PTHR30450 54 292 1.5E-126 T 22-04-2016 LK04_RS12620 1b319f5ca87d2b3c8a627b7954ea8c3e 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 282 1.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12620 1b319f5ca87d2b3c8a627b7954ea8c3e 292 Gene3D G3DSA:1.10.3720.10 65 285 7.4E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS19545 b061e9c2e9b3bec7f5dd1b1d436006d7 329 Pfam PF13531 Bacterial extracellular solute-binding protein 31 280 1.3E-45 T 22-04-2016 LK04_RS19545 b061e9c2e9b3bec7f5dd1b1d436006d7 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 LK04_RS19545 b061e9c2e9b3bec7f5dd1b1d436006d7 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 LK04_RS19545 b061e9c2e9b3bec7f5dd1b1d436006d7 329 SUPERFAMILY SSF53850 21 327 1.02E-90 T 22-04-2016 LK04_RS19545 b061e9c2e9b3bec7f5dd1b1d436006d7 329 Gene3D G3DSA:3.40.190.10 21 165 1.3E-49 T 22-04-2016 LK04_RS19545 b061e9c2e9b3bec7f5dd1b1d436006d7 329 Gene3D G3DSA:3.40.190.10 174 294 6.4E-31 T 22-04-2016 LK04_RS19545 b061e9c2e9b3bec7f5dd1b1d436006d7 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 3.2E-174 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 LK04_RS19545 b061e9c2e9b3bec7f5dd1b1d436006d7 329 PANTHER PTHR30368 4 329 6.4E-188 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 LK04_RS19545 b061e9c2e9b3bec7f5dd1b1d436006d7 329 PANTHER PTHR30368:SF2 4 329 6.4E-188 T 22-04-2016 LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 1 294 66.626 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 Gene3D G3DSA:1.10.1040.10 164 292 1.9E-42 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 PANTHER PTHR22981 1 294 6.5E-205 T 22-04-2016 LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 PANTHER PTHR22981:SF78 1 294 6.5E-205 T 22-04-2016 LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 PIRSF PIRSF000103 1 292 3.3E-90 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 Gene3D G3DSA:3.40.50.720 1 162 1.1E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 281 1.0E-37 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 SUPERFAMILY SSF48179 162 291 1.9E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 2 292 3.9E-142 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 SUPERFAMILY SSF51735 1 162 6.82E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS03390 63312f7a5b88dab1ecc9b2510f890eb9 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 9.9E-51 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LK04_RS08490 5966019ec801b362cee86c7797330c2c 62 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 15 62 6.0E-17 T 22-04-2016 LK04_RS08490 5966019ec801b362cee86c7797330c2c 62 Pfam PF13617 YnbE-like lipoprotein 6 60 2.7E-29 T 22-04-2016 IPR025985 YnbE-like lipoprotein LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 Gene3D G3DSA:1.10.8.50 127 262 1.2E-32 T 22-04-2016 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 Gene3D G3DSA:3.20.190.10 2 104 1.0E-16 T 22-04-2016 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 SMART SM01232 126 220 1.4E-13 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 205 8.2E-10 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 Pfam PF06827 Zinc finger found in FPG and IleRS 234 262 2.3E-7 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 2.4E-9 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 SUPERFAMILY SSF46946 126 215 8.1E-17 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 ProSitePatterns PS01242 Zinc finger FPG-type signature. 237 261 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 PANTHER PTHR22993:SF14 1 262 7.2E-141 T 22-04-2016 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 SMART SM00898 2 110 5.4E-16 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 SUPERFAMILY SSF57716 224 262 1.09E-10 T 22-04-2016 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 SUPERFAMILY SSF81624 2 127 5.63E-25 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LK04_RS13125 c54a6c80b38da45e0c4189b285276bee 262 PANTHER PTHR22993 1 262 7.2E-141 T 22-04-2016 LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 Hamap MF_00551 Uridine kinase [udk]. 5 212 39.087 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 TIGRFAM TIGR00235 udk: uridine kinase 5 211 5.1E-94 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 PRINTS PR00988 Uridine kinase signature 87 102 6.6E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 PRINTS PR00988 Uridine kinase signature 179 192 6.6E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 PRINTS PR00988 Uridine kinase signature 42 53 6.6E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 PRINTS PR00988 Uridine kinase signature 8 25 6.6E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 PRINTS PR00988 Uridine kinase signature 157 168 6.6E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 PRINTS PR00988 Uridine kinase signature 143 153 6.6E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 SUPERFAMILY SSF52540 8 205 3.01E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 PANTHER PTHR10285 1 212 2.9E-90 T 22-04-2016 LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 Gene3D G3DSA:3.40.50.300 3 205 3.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06035 c6eafb50d4461d48d7f5e50dd7b1a6ee 212 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 6.9E-44 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 SMART SM00319 50 190 1.3E-6 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 Pfam PF00672 HAMP domain 209 277 2.9E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 SUPERFAMILY SSF58104 248 529 9.42E-74 T 22-04-2016 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 306 328 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 PANTHER PTHR32089:SF35 1 531 5.6E-234 T 22-04-2016 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 SMART SM00304 228 280 2.7E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 527 4.7E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 3.9E-45 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 3.9E-45 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 46 61 3.9E-45 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 3.9E-45 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 SMART SM00283 281 528 1.7E-86 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 PANTHER PTHR32089 1 531 5.6E-234 T 22-04-2016 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 Pfam PF02203 Tar ligand binding domain homologue 16 189 1.3E-27 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 Gene3D G3DSA:1.10.287.950 296 500 9.2E-63 T 22-04-2016 LK04_RS06885 02e81153257bd3f3d9bd0fc03dcf851f 568 SUPERFAMILY SSF47170 40 179 6.8E-15 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 PANTHER PTHR13794:SF61 194 396 8.3E-113 T 22-04-2016 LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 PANTHER PTHR13794:SF61 3 153 8.3E-113 T 22-04-2016 LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 SMART SM00922 133 270 4.2E-12 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 PANTHER PTHR13794 194 396 8.3E-113 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 PANTHER PTHR13794 3 153 8.3E-113 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 SUPERFAMILY SSF51604 103 399 2.75E-67 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 Gene3D G3DSA:3.30.390.10 2 124 1.7E-43 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 Gene3D G3DSA:3.20.20.120 125 379 1.4E-73 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 SUPERFAMILY SSF54826 5 120 1.93E-28 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 19 115 9.2E-22 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 220 251 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 Pfam PF13378 Enolase C-terminal domain-like 205 390 2.7E-42 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS10840 bcc31dcfa5b485179a960f7693b683fc 417 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 90 115 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LK04_RS17965 1a3b609df3190dc964d3aa82a5870270 426 SUPERFAMILY SSF48452 37 86 3.23E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS17965 1a3b609df3190dc964d3aa82a5870270 426 Gene3D G3DSA:1.25.40.10 38 125 1.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS07385 0836278a050304f50a1b6cd41132581f 242 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 3 242 42.253 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 LK04_RS07385 0836278a050304f50a1b6cd41132581f 242 Gene3D G3DSA:3.40.50.150 19 241 2.3E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS07385 0836278a050304f50a1b6cd41132581f 242 Pfam PF13649 Methyltransferase domain 60 158 4.0E-13 T 22-04-2016 LK04_RS07385 0836278a050304f50a1b6cd41132581f 242 PANTHER PTHR10108 1 241 1.2E-111 T 22-04-2016 LK04_RS07385 0836278a050304f50a1b6cd41132581f 242 PANTHER PTHR10108:SF809 1 241 1.2E-111 T 22-04-2016 LK04_RS07385 0836278a050304f50a1b6cd41132581f 242 SUPERFAMILY SSF53335 20 242 5.83E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS07385 0836278a050304f50a1b6cd41132581f 242 PIRSF PIRSF006325 1 242 2.6E-129 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 LK04_RS07385 0836278a050304f50a1b6cd41132581f 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 7.7E-127 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 519 3.8E-221 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 PANTHER PTHR11632 3 539 1.1E-265 T 22-04-2016 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 Gene3D G3DSA:3.90.700.10 244 348 5.7E-37 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 Gene3D G3DSA:1.20.58.100 414 521 1.4E-33 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 PANTHER PTHR11632:SF27 3 539 1.1E-265 T 22-04-2016 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 Pfam PF00890 FAD binding domain 10 392 3.0E-100 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 4.7E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 SUPERFAMILY SSF46977 425 525 1.7E-29 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 4.5E-10 T 22-04-2016 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 4.5E-10 T 22-04-2016 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 SUPERFAMILY SSF51905 5 255 1.99E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 SUPERFAMILY SSF51905 356 447 1.99E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 Gene3D G3DSA:3.50.50.60 349 410 2.4E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 Gene3D G3DSA:3.50.50.60 3 243 2.4E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS03995 c16afa0b7176b25207403730a7512cd7 539 SUPERFAMILY SSF56425 238 353 4.04E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LK04_RS12500 b4ac536823fca48c35c2e4beee77ac5e 209 PANTHER PTHR33798:SF4 2 208 9.4E-86 T 22-04-2016 LK04_RS12500 b4ac536823fca48c35c2e4beee77ac5e 209 SUPERFAMILY SSF50475 1 192 1.86E-49 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS12500 b4ac536823fca48c35c2e4beee77ac5e 209 Pfam PF01613 Flavin reductase like domain 26 170 4.2E-18 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LK04_RS12500 b4ac536823fca48c35c2e4beee77ac5e 209 PANTHER PTHR33798 2 208 9.4E-86 T 22-04-2016 LK04_RS12500 b4ac536823fca48c35c2e4beee77ac5e 209 Gene3D G3DSA:2.30.110.10 13 187 6.6E-66 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS12500 b4ac536823fca48c35c2e4beee77ac5e 209 SMART SM00903 24 175 6.0E-14 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LK04_RS05555 9e05b509ec169aabbfb4f3a39b1326cd 150 PANTHER PTHR23091 12 150 3.6E-40 T 22-04-2016 LK04_RS05555 9e05b509ec169aabbfb4f3a39b1326cd 150 Gene3D G3DSA:3.40.630.30 2 150 3.4E-47 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS05555 9e05b509ec169aabbfb4f3a39b1326cd 150 SUPERFAMILY SSF55729 1 149 2.48E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS05555 9e05b509ec169aabbfb4f3a39b1326cd 150 Pfam PF13673 Acetyltransferase (GNAT) domain 43 150 2.7E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS05555 9e05b509ec169aabbfb4f3a39b1326cd 150 PANTHER PTHR23091:SF275 12 150 3.6E-40 T 22-04-2016 LK04_RS18530 3cfabb97f3d5b42131d52af3b7fce6f2 213 SUPERFAMILY SSF81342 4 209 2.35E-53 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 LK04_RS18530 3cfabb97f3d5b42131d52af3b7fce6f2 213 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 6 205 1.3E-68 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 LK04_RS18530 3cfabb97f3d5b42131d52af3b7fce6f2 213 Gene3D G3DSA:1.20.950.20 1 211 4.6E-71 T 22-04-2016 LK04_RS18530 3cfabb97f3d5b42131d52af3b7fce6f2 213 PANTHER PTHR30074 1 213 6.1E-94 T 22-04-2016 LK04_RS18530 3cfabb97f3d5b42131d52af3b7fce6f2 213 Pfam PF01292 Prokaryotic cytochrome b561 9 184 1.7E-23 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 PANTHER PTHR24221:SF260 147 713 1.1E-300 T 22-04-2016 LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 PANTHER PTHR24221:SF260 87 111 1.1E-300 T 22-04-2016 LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 Gene3D G3DSA:3.90.70.10 27 133 3.2E-15 T 22-04-2016 LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 Pfam PF00005 ABC transporter 511 656 2.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 PANTHER PTHR24221 147 713 1.1E-300 T 22-04-2016 LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 PANTHER PTHR24221 87 111 1.1E-300 T 22-04-2016 LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 SUPERFAMILY SSF90123 161 472 1.19E-53 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 Gene3D G3DSA:3.40.50.300 491 711 4.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 SUPERFAMILY SSF52540 480 705 1.81E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 SMART SM00382 516 702 1.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 Pfam PF00664 ABC transporter transmembrane region 178 443 4.3E-24 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 Gene3D G3DSA:1.20.1560.10 162 472 7.5E-51 T 22-04-2016 LK04_RS02790 9ec6778f35ba229432d6f063ae0649d9 727 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 27 713 1.2E-229 T 22-04-2016 IPR017750 ATPase, type I secretion system LK04_RS04450 d0939496670a20be077c7a653e4ab777 62 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 3.1E-32 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 LK04_RS03775 0e0748026620d24e0e6f32d7e20c6365 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 12 497 2.7E-212 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LK04_RS03775 0e0748026620d24e0e6f32d7e20c6365 511 PANTHER PTHR23501 3 503 0.0 T 22-04-2016 LK04_RS03775 0e0748026620d24e0e6f32d7e20c6365 511 Gene3D G3DSA:1.20.1250.20 15 194 2.9E-32 T 22-04-2016 LK04_RS03775 0e0748026620d24e0e6f32d7e20c6365 511 Pfam PF07690 Major Facilitator Superfamily 18 412 2.7E-53 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS03775 0e0748026620d24e0e6f32d7e20c6365 511 Gene3D G3DSA:1.20.1250.20 265 423 2.9E-24 T 22-04-2016 LK04_RS03775 0e0748026620d24e0e6f32d7e20c6365 511 Gene3D G3DSA:1.20.1250.20 475 500 2.9E-24 T 22-04-2016 LK04_RS03775 0e0748026620d24e0e6f32d7e20c6365 511 SUPERFAMILY SSF103473 250 422 3.92E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS03775 0e0748026620d24e0e6f32d7e20c6365 511 SUPERFAMILY SSF103473 474 499 3.92E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS03775 0e0748026620d24e0e6f32d7e20c6365 511 SUPERFAMILY SSF103473 10 195 3.92E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS03775 0e0748026620d24e0e6f32d7e20c6365 511 PANTHER PTHR23501:SF52 3 503 0.0 T 22-04-2016 LK04_RS05250 119cda1abeca257a96ca3ec01bdacd76 94 PANTHER PTHR38769 1 94 7.9E-28 T 22-04-2016 LK04_RS05250 119cda1abeca257a96ca3ec01bdacd76 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 2.1E-38 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 LK04_RS05250 119cda1abeca257a96ca3ec01bdacd76 94 Gene3D G3DSA:3.30.70.860 23 94 6.5E-30 T 22-04-2016 LK04_RS05250 119cda1abeca257a96ca3ec01bdacd76 94 PANTHER PTHR38769:SF1 1 94 7.9E-28 T 22-04-2016 LK04_RS05250 119cda1abeca257a96ca3ec01bdacd76 94 Pfam PF04175 Protein of unknown function (DUF406) 3 94 6.7E-37 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 Gene3D G3DSA:3.30.559.10 165 402 2.0E-92 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 SUPERFAMILY SSF51230 2 95 4.06E-25 T 22-04-2016 IPR011053 Single hybrid motif LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 Pfam PF00364 Biotin-requiring enzyme 5 76 1.6E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 Gene3D G3DSA:2.40.50.100 1 96 2.4E-26 T 22-04-2016 LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 402 1.0E-81 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 Gene3D G3DSA:4.10.320.10 114 153 1.1E-20 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 PANTHER PTHR23151:SF47 4 404 7.8E-247 T 22-04-2016 LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 Pfam PF02817 e3 binding domain 114 147 1.0E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 SUPERFAMILY SSF47005 107 151 5.75E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 404 3.7E-192 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 PANTHER PTHR23151 4 404 7.8E-247 T 22-04-2016 LK04_RS13090 e8e292e33c2df6f6ecd509691052a629 404 SUPERFAMILY SSF52777 174 403 1.87E-89 T 22-04-2016 LK04_RS06970 913e8982b6bb940e0385018ca64aa429 403 SUPERFAMILY SSF141868 171 390 1.96E-53 T 22-04-2016 IPR001633 EAL domain LK04_RS06970 913e8982b6bb940e0385018ca64aa429 403 SUPERFAMILY SSF54975 1 132 3.01E-35 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LK04_RS06970 913e8982b6bb940e0385018ca64aa429 403 SMART SM01034 2 94 4.3E-36 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 LK04_RS06970 913e8982b6bb940e0385018ca64aa429 403 Pfam PF00563 EAL domain 173 389 2.2E-50 T 22-04-2016 IPR001633 EAL domain LK04_RS06970 913e8982b6bb940e0385018ca64aa429 403 PANTHER PTHR33121 33 402 7.0E-149 T 22-04-2016 LK04_RS06970 913e8982b6bb940e0385018ca64aa429 403 PANTHER PTHR33121:SF15 33 402 7.0E-149 T 22-04-2016 LK04_RS06970 913e8982b6bb940e0385018ca64aa429 403 Pfam PF04940 Sensors of blue-light using FAD 2 92 6.8E-25 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 LK04_RS06970 913e8982b6bb940e0385018ca64aa429 403 Gene3D G3DSA:3.20.20.450 173 390 1.3E-48 T 22-04-2016 IPR001633 EAL domain LK04_RS06970 913e8982b6bb940e0385018ca64aa429 403 SMART SM00052 147 394 4.4E-43 T 22-04-2016 IPR001633 EAL domain LK04_RS08515 904641785c264c942062b567decbeebe 157 Hamap MF_00546 Acid shock protein [asr]. 1 127 14.925 T 22-04-2016 IPR023497 Acid shock protein LK04_RS02945 9ef57f316fcf05aaf3f927ce5c2830d2 109 Pfam PF05164 Cell division protein ZapA 6 90 2.5E-20 T 22-04-2016 IPR007838 Cell division protein ZapA-like LK04_RS02945 9ef57f316fcf05aaf3f927ce5c2830d2 109 PANTHER PTHR34981 2 109 1.0E-31 T 22-04-2016 LK04_RS02945 9ef57f316fcf05aaf3f927ce5c2830d2 109 SUPERFAMILY SSF102829 6 95 6.15E-26 T 22-04-2016 IPR007838 Cell division protein ZapA-like LK04_RS02945 9ef57f316fcf05aaf3f927ce5c2830d2 109 PANTHER PTHR34981:SF1 2 109 1.0E-31 T 22-04-2016 LK04_RS02945 9ef57f316fcf05aaf3f927ce5c2830d2 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 34.033 T 22-04-2016 IPR023771 Cell division protein ZapA, eubacteria LK04_RS04300 7a3cf943ca58559bab84ac651a92778a 507 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 14 307 5.9E-97 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 LK04_RS04300 7a3cf943ca58559bab84ac651a92778a 507 Gene3D G3DSA:3.30.420.40 6 132 5.6E-44 T 22-04-2016 LK04_RS04300 7a3cf943ca58559bab84ac651a92778a 507 SUPERFAMILY SSF53067 138 311 4.58E-45 T 22-04-2016 LK04_RS04300 7a3cf943ca58559bab84ac651a92778a 507 Gene3D G3DSA:3.30.420.150 133 312 2.0E-51 T 22-04-2016 LK04_RS04300 7a3cf943ca58559bab84ac651a92778a 507 PANTHER PTHR30005 1 507 6.1E-242 T 22-04-2016 LK04_RS04300 7a3cf943ca58559bab84ac651a92778a 507 SUPERFAMILY SSF109604 314 505 3.39E-52 T 22-04-2016 LK04_RS04300 7a3cf943ca58559bab84ac651a92778a 507 Pfam PF02541 Ppx/GppA phosphatase family 27 309 3.2E-97 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 LK04_RS04300 7a3cf943ca58559bab84ac651a92778a 507 PANTHER PTHR30005:SF4 1 507 6.1E-242 T 22-04-2016 LK04_RS04300 7a3cf943ca58559bab84ac651a92778a 507 PIRSF PIRSF001267 4 507 3.4E-200 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 LK04_RS04300 7a3cf943ca58559bab84ac651a92778a 507 SUPERFAMILY SSF53067 14 134 2.85E-36 T 22-04-2016 LK04_RS00140 257baa573147bdbc4c88d570aeffa986 313 SUPERFAMILY SSF47616 159 292 1.39E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS00140 257baa573147bdbc4c88d570aeffa986 313 Gene3D G3DSA:3.40.30.10 29 170 9.3E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS00140 257baa573147bdbc4c88d570aeffa986 313 SUPERFAMILY SSF52833 31 155 5.12E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS00140 257baa573147bdbc4c88d570aeffa986 313 Gene3D G3DSA:1.20.1050.10 171 283 8.6E-23 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS00140 257baa573147bdbc4c88d570aeffa986 313 Pfam PF13410 Glutathione S-transferase, C-terminal domain 198 269 8.3E-13 T 22-04-2016 LK04_RS00140 257baa573147bdbc4c88d570aeffa986 313 PIRSF PIRSF015753 5 312 1.1E-123 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 LK04_RS00140 257baa573147bdbc4c88d570aeffa986 313 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 151 2.0E-21 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS00140 257baa573147bdbc4c88d570aeffa986 313 PANTHER PTHR32419 7 308 5.5E-158 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 LK04_RS07250 32129b56106b4f250e8062c5a9950f86 240 PANTHER PTHR12192:SF9 1 234 5.1E-100 T 22-04-2016 LK04_RS07250 32129b56106b4f250e8062c5a9950f86 240 SUPERFAMILY SSF110857 65 178 8.11E-10 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like LK04_RS07250 32129b56106b4f250e8062c5a9950f86 240 Pfam PF04752 ChaC-like protein 65 232 1.1E-46 T 22-04-2016 IPR006840 ChaC-like protein LK04_RS07250 32129b56106b4f250e8062c5a9950f86 240 PANTHER PTHR12192 1 234 5.1E-100 T 22-04-2016 IPR006840 ChaC-like protein LK04_RS07250 32129b56106b4f250e8062c5a9950f86 240 Gene3D G3DSA:3.10.490.10 59 227 4.7E-42 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 Gene3D G3DSA:3.30.1730.10 5 166 7.2E-60 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 Hamap MF_01932 AMP nucleosidase [amn]. 3 482 58.582 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 164 7.7E-53 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 11 482 1.0E-226 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 PANTHER PTHR21234 178 223 6.4E-133 T 22-04-2016 IPR018017 Nucleoside phosphorylase LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 PANTHER PTHR21234 247 482 6.4E-133 T 22-04-2016 IPR018017 Nucleoside phosphorylase LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 PANTHER PTHR21234:SF11 178 223 6.4E-133 T 22-04-2016 LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 PANTHER PTHR21234:SF11 247 482 6.4E-133 T 22-04-2016 LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 Gene3D G3DSA:3.40.50.1580 172 464 3.8E-114 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 SUPERFAMILY SSF53167 11 482 1.13E-151 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS06755 1e1a9233d05c4d16092bc8a57c5d067d 482 Pfam PF01048 Phosphorylase superfamily 267 428 2.0E-18 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS04590 81da5ad9bfb7bb1d3e2987ab1a88fad8 285 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 59 274 3.0E-49 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS04590 81da5ad9bfb7bb1d3e2987ab1a88fad8 285 SUPERFAMILY SSF53187 201 278 2.23E-52 T 22-04-2016 LK04_RS04590 81da5ad9bfb7bb1d3e2987ab1a88fad8 285 SUPERFAMILY SSF53187 57 153 2.23E-52 T 22-04-2016 LK04_RS04590 81da5ad9bfb7bb1d3e2987ab1a88fad8 285 Gene3D G3DSA:3.40.630.40 57 154 6.4E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS04590 81da5ad9bfb7bb1d3e2987ab1a88fad8 285 Gene3D G3DSA:3.40.630.40 202 278 6.4E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS04590 81da5ad9bfb7bb1d3e2987ab1a88fad8 285 PANTHER PTHR30404 32 281 5.3E-140 T 22-04-2016 LK04_RS04590 81da5ad9bfb7bb1d3e2987ab1a88fad8 285 SMART SM00646 119 274 2.2E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS04590 81da5ad9bfb7bb1d3e2987ab1a88fad8 285 PANTHER PTHR30404:SF2 32 281 5.3E-140 T 22-04-2016 LK04_RS16685 ef752023f72a9f9c15eac82697e9031a 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.7E-48 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 LK04_RS16685 ef752023f72a9f9c15eac82697e9031a 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.996 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid LK04_RS16685 ef752023f72a9f9c15eac82697e9031a 130 PANTHER PTHR21569 1 130 1.3E-75 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 LK04_RS16685 ef752023f72a9f9c15eac82697e9031a 130 SUPERFAMILY SSF54211 6 130 3.26E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LK04_RS16685 ef752023f72a9f9c15eac82697e9031a 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 LK04_RS16685 ef752023f72a9f9c15eac82697e9031a 130 Gene3D G3DSA:3.30.230.10 5 130 4.2E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LK04_RS06200 14a6adb40ae2861086d0f6b682907e0d 258 PANTHER PTHR21235 1 258 5.3E-115 T 22-04-2016 LK04_RS06200 14a6adb40ae2861086d0f6b682907e0d 258 Pfam PF00977 Histidine biosynthesis protein 5 239 3.0E-76 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 LK04_RS06200 14a6adb40ae2861086d0f6b682907e0d 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.262 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 LK04_RS06200 14a6adb40ae2861086d0f6b682907e0d 258 Gene3D G3DSA:3.20.20.70 4 256 7.8E-86 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS06200 14a6adb40ae2861086d0f6b682907e0d 258 SUPERFAMILY SSF51366 1 256 9.42E-72 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LK04_RS06200 14a6adb40ae2861086d0f6b682907e0d 258 PANTHER PTHR21235:SF2 1 258 5.3E-115 T 22-04-2016 LK04_RS06200 14a6adb40ae2861086d0f6b682907e0d 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 3.9E-115 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 LK04_RS08920 1f2f802c5d5ca05a5394f79b855cd78c 335 PANTHER PTHR32196 21 321 3.6E-74 T 22-04-2016 LK04_RS08920 1f2f802c5d5ca05a5394f79b855cd78c 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 320 4.9E-31 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS08920 1f2f802c5d5ca05a5394f79b855cd78c 335 PANTHER PTHR32196:SF39 21 321 3.6E-74 T 22-04-2016 LK04_RS17680 ff877af360736f587ff41efe036b5faf 309 PANTHER PTHR20919 2 309 7.4E-158 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 LK04_RS17680 ff877af360736f587ff41efe036b5faf 309 PANTHER PTHR20919:SF0 2 309 7.4E-158 T 22-04-2016 LK04_RS17680 ff877af360736f587ff41efe036b5faf 309 SUPERFAMILY SSF52317 17 297 4.15E-100 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS17680 ff877af360736f587ff41efe036b5faf 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.8E-157 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 LK04_RS17680 ff877af360736f587ff41efe036b5faf 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-127 T 22-04-2016 LK04_RS17680 ff877af360736f587ff41efe036b5faf 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.253 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 LK04_RS17680 ff877af360736f587ff41efe036b5faf 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 7.7E-130 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 LK04_RS17680 ff877af360736f587ff41efe036b5faf 309 Gene3D G3DSA:3.40.50.880 34 301 1.1E-119 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS17680 ff877af360736f587ff41efe036b5faf 309 PIRSF PIRSF000450 1 308 2.6E-144 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 LK04_RS13475 db7eff5b466c79c67a6c02e7f936ad79 360 Gene3D G3DSA:1.10.1530.10 6 75 1.3E-20 T 22-04-2016 LK04_RS13475 db7eff5b466c79c67a6c02e7f936ad79 360 PANTHER PTHR11091 6 356 9.8E-175 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS13475 db7eff5b466c79c67a6c02e7f936ad79 360 SUPERFAMILY SSF89733 6 345 7.19E-100 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS13475 db7eff5b466c79c67a6c02e7f936ad79 360 Gene3D G3DSA:3.30.1370.60 76 272 7.8E-77 T 22-04-2016 LK04_RS13475 db7eff5b466c79c67a6c02e7f936ad79 360 PANTHER PTHR11091:SF2 6 356 9.8E-175 T 22-04-2016 LK04_RS13475 db7eff5b466c79c67a6c02e7f936ad79 360 Pfam PF02615 Malate/L-lactate dehydrogenase 8 338 2.2E-108 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS13475 db7eff5b466c79c67a6c02e7f936ad79 360 Gene3D G3DSA:1.10.1530.10 273 354 1.3E-8 T 22-04-2016 LK04_RS06135 85e5da142d49000c6ba0fc66466e1fae 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 2.8E-83 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LK04_RS06135 85e5da142d49000c6ba0fc66466e1fae 182 Gene3D G3DSA:2.60.120.10 1 178 1.9E-82 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS06135 85e5da142d49000c6ba0fc66466e1fae 182 SUPERFAMILY SSF51182 1 179 5.34E-78 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS06135 85e5da142d49000c6ba0fc66466e1fae 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 8.5E-75 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LK04_RS06135 85e5da142d49000c6ba0fc66466e1fae 182 PANTHER PTHR21047:SF2 1 175 5.2E-80 T 22-04-2016 LK04_RS06135 85e5da142d49000c6ba0fc66466e1fae 182 PANTHER PTHR21047 1 175 5.2E-80 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LK04_RS06135 85e5da142d49000c6ba0fc66466e1fae 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 169 8.0E-79 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LK04_RS11955 88ffec14c37c6484adb67b0ae05deb5d 262 Gene3D G3DSA:1.10.3720.10 53 249 6.5E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS11955 88ffec14c37c6484adb67b0ae05deb5d 262 SUPERFAMILY SSF161098 56 237 1.53E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS11955 88ffec14c37c6484adb67b0ae05deb5d 262 PANTHER PTHR30151:SF22 4 262 2.8E-185 T 22-04-2016 LK04_RS11955 88ffec14c37c6484adb67b0ae05deb5d 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 7.3E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS11955 88ffec14c37c6484adb67b0ae05deb5d 262 PANTHER PTHR30151 4 262 2.8E-185 T 22-04-2016 LK04_RS10270 0b562946dd12962c6bf5bf03ee68ba1d 222 SMART SM00479 18 203 3.2E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LK04_RS10270 0b562946dd12962c6bf5bf03ee68ba1d 222 SUPERFAMILY SSF53098 8 207 7.05E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS10270 0b562946dd12962c6bf5bf03ee68ba1d 222 Gene3D G3DSA:3.30.420.10 10 209 2.1E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS10270 0b562946dd12962c6bf5bf03ee68ba1d 222 Hamap MF_00157 Ribonuclease T [rnt]. 1 222 118.7 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 LK04_RS10270 0b562946dd12962c6bf5bf03ee68ba1d 222 PANTHER PTHR30231:SF2 1 214 1.2E-116 T 22-04-2016 LK04_RS10270 0b562946dd12962c6bf5bf03ee68ba1d 222 Pfam PF00929 Exonuclease 20 194 3.7E-38 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LK04_RS10270 0b562946dd12962c6bf5bf03ee68ba1d 222 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 1.8E-106 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 LK04_RS10270 0b562946dd12962c6bf5bf03ee68ba1d 222 PANTHER PTHR30231 1 214 1.2E-116 T 22-04-2016 LK04_RS11230 5ec1d9cd130d9fa52229cbb6e1991741 347 SUPERFAMILY SSF51445 7 315 1.37E-87 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS11230 5ec1d9cd130d9fa52229cbb6e1991741 347 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 307 2.9E-98 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LK04_RS11230 5ec1d9cd130d9fa52229cbb6e1991741 347 Gene3D G3DSA:3.20.20.300 8 324 2.4E-99 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LK04_RS11230 5ec1d9cd130d9fa52229cbb6e1991741 347 PANTHER PTHR30480:SF7 9 327 6.3E-141 T 22-04-2016 LK04_RS11230 5ec1d9cd130d9fa52229cbb6e1991741 347 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 8 337 48.502 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 LK04_RS11230 5ec1d9cd130d9fa52229cbb6e1991741 347 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 239 256 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 LK04_RS11230 5ec1d9cd130d9fa52229cbb6e1991741 347 PANTHER PTHR30480 9 327 6.3E-141 T 22-04-2016 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 SUPERFAMILY SSF52218 48 192 8.19E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 Gene3D G3DSA:2.40.30.10 216 264 1.3E-40 T 22-04-2016 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 Gene3D G3DSA:2.40.30.10 369 440 1.3E-40 T 22-04-2016 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 Gene3D G3DSA:3.40.50.80 441 583 3.4E-57 T 22-04-2016 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00369 Flavodoxin signature 132 142 2.4E-13 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00369 Flavodoxin signature 52 65 2.4E-13 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00369 Flavodoxin signature 100 111 2.4E-13 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00369 Flavodoxin signature 156 175 2.4E-13 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 Gene3D G3DSA:3.40.50.360 46 193 6.2E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 Pfam PF00667 FAD binding domain 216 409 5.5E-33 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 Pfam PF00258 Flavodoxin 53 176 2.1E-29 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PANTHER PTHR19384 46 584 5.8E-190 T 22-04-2016 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 Pfam PF00175 Oxidoreductase NAD-binding domain 442 548 2.0E-18 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 Gene3D G3DSA:1.20.990.10 265 368 5.6E-16 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 SUPERFAMILY SSF63380 214 431 2.27E-58 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 466 475 8.5E-31 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 371 378 8.5E-31 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 479 490 8.5E-31 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 254 264 8.5E-31 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 441 460 8.5E-31 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 404 413 8.5E-31 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 510 526 8.5E-31 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 533 541 8.5E-31 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 PIRSF PIRSF000207 8 584 7.6E-226 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LK04_RS16670 0ff7c039ccda20a5c2d4c7de7b9fe341 584 SUPERFAMILY SSF52343 430 584 2.23E-50 T 22-04-2016 LK04_RS14660 1465ccd36c3c891e07dac296e91a3873 386 Pfam PF00155 Aminotransferase class I and II 31 383 4.0E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS14660 1465ccd36c3c891e07dac296e91a3873 386 SUPERFAMILY SSF53383 11 385 1.46E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS14660 1465ccd36c3c891e07dac296e91a3873 386 Gene3D G3DSA:3.40.640.10 45 272 9.8E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS14660 1465ccd36c3c891e07dac296e91a3873 386 Gene3D G3DSA:3.90.1150.10 273 383 2.8E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS14660 1465ccd36c3c891e07dac296e91a3873 386 PANTHER PTHR11751:SF301 11 386 5.3E-150 T 22-04-2016 LK04_RS14660 1465ccd36c3c891e07dac296e91a3873 386 PANTHER PTHR11751 11 386 5.3E-150 T 22-04-2016 LK04_RS00700 1d7d471eeb31d58bab7b39fd17cc5833 190 PANTHER PTHR11071 32 189 1.2E-66 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LK04_RS00700 1d7d471eeb31d58bab7b39fd17cc5833 190 SUPERFAMILY SSF50891 26 189 1.46E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS00700 1d7d471eeb31d58bab7b39fd17cc5833 190 Gene3D G3DSA:2.40.100.10 27 189 1.4E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS00700 1d7d471eeb31d58bab7b39fd17cc5833 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 2.8E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LK04_RS00700 1d7d471eeb31d58bab7b39fd17cc5833 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 82 2.8E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LK04_RS00700 1d7d471eeb31d58bab7b39fd17cc5833 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 2.8E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LK04_RS00700 1d7d471eeb31d58bab7b39fd17cc5833 190 PANTHER PTHR11071:SF265 32 189 1.2E-66 T 22-04-2016 LK04_RS00700 1d7d471eeb31d58bab7b39fd17cc5833 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 188 2.1E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LK04_RS00700 1d7d471eeb31d58bab7b39fd17cc5833 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 65 82 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 LK04_RS05265 452a1823f5d1a75615c08f090f91f415 160 Gene3D G3DSA:3.40.50.1240 1 157 5.5E-40 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS05265 452a1823f5d1a75615c08f090f91f415 160 SUPERFAMILY SSF53254 1 143 7.85E-15 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS05265 452a1823f5d1a75615c08f090f91f415 160 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 70 8.8E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LK04_RS05265 452a1823f5d1a75615c08f090f91f415 160 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 4.8E-49 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- LK04_RS05265 452a1823f5d1a75615c08f090f91f415 160 PANTHER PTHR23029 1 77 9.2E-12 T 22-04-2016 LK04_RS04140 2a781dbde66d06e437e5f5d009fcca56 247 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 239 8.1E-87 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LK04_RS04140 2a781dbde66d06e437e5f5d009fcca56 247 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.4E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LK04_RS04140 2a781dbde66d06e437e5f5d009fcca56 247 PANTHER PTHR12029 3 180 6.1E-48 T 22-04-2016 LK04_RS04140 2a781dbde66d06e437e5f5d009fcca56 247 Gene3D G3DSA:3.40.1280.10 4 175 2.8E-34 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LK04_RS04140 2a781dbde66d06e437e5f5d009fcca56 247 PIRSF PIRSF004808 1 244 6.3E-77 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LK04_RS04140 2a781dbde66d06e437e5f5d009fcca56 247 SUPERFAMILY SSF75217 4 164 2.75E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LK04_RS18575 2cd72658623373bc72de73151ace43d3 130 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 13 129 4.6E-33 T 22-04-2016 IPR006056 RidA family LK04_RS18575 2cd72658623373bc72de73151ace43d3 130 Gene3D G3DSA:3.30.1330.40 12 129 7.5E-37 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LK04_RS18575 2cd72658623373bc72de73151ace43d3 130 SUPERFAMILY SSF55298 10 130 1.41E-36 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LK04_RS18575 2cd72658623373bc72de73151ace43d3 130 Pfam PF01042 Endoribonuclease L-PSP 15 129 1.7E-31 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family LK04_RS18575 2cd72658623373bc72de73151ace43d3 130 PANTHER PTHR11803 20 130 1.2E-41 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 PANTHER PTHR11353 2 550 2.6E-254 T 22-04-2016 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 Gene3D G3DSA:1.10.560.10 369 520 3.5E-40 T 22-04-2016 IPR027413 GroEL-like equatorial domain LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 7.4E-255 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 Gene3D G3DSA:1.10.560.10 3 188 8.5E-48 T 22-04-2016 IPR027413 GroEL-like equatorial domain LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 SUPERFAMILY SSF52029 185 376 1.03E-82 T 22-04-2016 IPR027409 GroEL-like apical domain LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 SUPERFAMILY SSF54849 137 203 5.04E-24 T 22-04-2016 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 549 41.71 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 SUPERFAMILY SSF48592 406 523 1.3E-76 T 22-04-2016 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 SUPERFAMILY SSF48592 7 134 1.3E-76 T 22-04-2016 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 3.4E-94 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 Gene3D G3DSA:3.50.7.10 189 368 2.3E-98 T 22-04-2016 IPR027409 GroEL-like apical domain LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LK04_RS16745 d1075692a05a235afdda74d7fee329a1 550 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LK04_RS11240 1ecedddbe6063958ba45cee42e8bd7f9 198 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 194 1.0E-52 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB LK04_RS11240 1ecedddbe6063958ba45cee42e8bd7f9 198 Pfam PF13036 Peptidoglycan-synthase activator LpoB 11 194 1.2E-48 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB LK04_RS11240 1ecedddbe6063958ba45cee42e8bd7f9 198 PANTHER PTHR40593 3 197 1.7E-63 T 22-04-2016 LK04_RS11240 1ecedddbe6063958ba45cee42e8bd7f9 198 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 4 197 34.925 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB LK04_RS00935 fe2eb265ef62d1ff78915a1b65100516 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 6.1E-27 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00935 fe2eb265ef62d1ff78915a1b65100516 101 PANTHER PTHR19836 1 101 6.0E-62 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00935 fe2eb265ef62d1ff78915a1b65100516 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.053 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid LK04_RS00935 fe2eb265ef62d1ff78915a1b65100516 101 Gene3D G3DSA:4.10.830.10 41 101 2.0E-31 T 22-04-2016 LK04_RS00935 fe2eb265ef62d1ff78915a1b65100516 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 LK04_RS00935 fe2eb265ef62d1ff78915a1b65100516 101 SUPERFAMILY SSF57716 2 101 1.07E-37 T 22-04-2016 LK04_RS05000 e43299d7286026dcc2a43bcce2b315e8 334 Pfam PF06147 Protein of unknown function (DUF968) 133 331 1.3E-77 T 22-04-2016 IPR010373 Protein of unknown function DUF968 LK04_RS05000 e43299d7286026dcc2a43bcce2b315e8 334 SMART SM00507 251 300 1.6E-5 T 22-04-2016 IPR003615 HNH nuclease LK04_RS09400 f4729ce2b9d3a67f3332947a18a05eb4 367 PANTHER PTHR22893:SF7 1 354 3.6E-147 T 22-04-2016 LK04_RS09400 f4729ce2b9d3a67f3332947a18a05eb4 367 SUPERFAMILY SSF51395 1 352 6.11E-109 T 22-04-2016 LK04_RS09400 f4729ce2b9d3a67f3332947a18a05eb4 367 PANTHER PTHR22893 1 354 3.6E-147 T 22-04-2016 LK04_RS09400 f4729ce2b9d3a67f3332947a18a05eb4 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 340 2.2E-57 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LK04_RS09400 f4729ce2b9d3a67f3332947a18a05eb4 367 Gene3D G3DSA:3.20.20.70 1 353 2.1E-119 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 SUPERFAMILY SSF52096 25 282 2.49E-90 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 8.4E-150 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 PANTHER PTHR22855:SF17 1 288 1.8E-181 T 22-04-2016 LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 Gene3D G3DSA:3.90.226.10 19 281 1.6E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.595 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.5E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.5E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.5E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.5E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.5E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 Pfam PF01039 Carboxyl transferase domain 58 240 5.4E-19 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS05365 0b2dd208b524fe9bed9de16898380d0d 302 PANTHER PTHR22855 1 288 1.8E-181 T 22-04-2016 LK04_RS05100 3c6878543e9284f153b635f0f5705d8f 107 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 5 86 2.1E-7 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 SUPERFAMILY SSF82866 290 490 5.62E-48 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.8E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.8E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.8E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.8E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 6.8E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.8E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.8E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 6.8E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.8E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 Gene3D G3DSA:1.10.3850.10 830 1044 5.5E-56 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 SUPERFAMILY SSF82693 268 324 1.83E-22 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 SUPERFAMILY SSF82714 709 777 7.72E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PANTHER PTHR32063 810 1065 0.0 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PANTHER PTHR32063 1 780 0.0 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 Gene3D G3DSA:3.30.2090.10 710 822 4.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 Gene3D G3DSA:3.30.2090.10 182 266 1.3E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 Gene3D G3DSA:3.30.70.1430 562 647 2.2E-8 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 SUPERFAMILY SSF82714 183 266 7.19E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 SUPERFAMILY SSF82866 823 1046 1.44E-45 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 Gene3D G3DSA:1.20.1640.10 285 499 1.5E-58 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 Pfam PF00873 AcrB/AcrD/AcrF family 4 1043 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 SUPERFAMILY SSF82693 40 130 1.73E-23 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 SUPERFAMILY SSF82693 137 182 1.83E-22 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PANTHER PTHR32063:SF21 810 1065 0.0 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 PANTHER PTHR32063:SF21 1 780 0.0 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 SUPERFAMILY SSF82693 556 652 3.66E-13 T 22-04-2016 LK04_RS03155 90e4f399d8f7875fe6de67b829d1d512 1065 Gene3D G3DSA:3.30.70.1430 40 141 9.7E-30 T 22-04-2016 LK04_RS18470 417b99a1013d29a79c33fb3e2b2fa9b3 177 Gene3D G3DSA:1.20.120.330 1 167 3.5E-76 T 22-04-2016 LK04_RS18470 417b99a1013d29a79c33fb3e2b2fa9b3 177 SUPERFAMILY SSF158668 5 166 4.71E-57 T 22-04-2016 LK04_RS18470 417b99a1013d29a79c33fb3e2b2fa9b3 177 PANTHER PTHR37941 1 173 1.2E-49 T 22-04-2016 LK04_RS18470 417b99a1013d29a79c33fb3e2b2fa9b3 177 Pfam PF05068 Mannitol repressor 8 166 4.5E-61 T 22-04-2016 IPR007761 Mannitol repressor LK04_RS18385 a6cc1c3f17ff2019d9ab1c5bdf0d568c 98 PANTHER PTHR36511:SF1 1 97 5.5E-31 T 22-04-2016 LK04_RS18385 a6cc1c3f17ff2019d9ab1c5bdf0d568c 98 Gene3D G3DSA:1.10.260.40 41 91 2.2E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS18385 a6cc1c3f17ff2019d9ab1c5bdf0d568c 98 PANTHER PTHR36511 1 97 5.5E-31 T 22-04-2016 LK04_RS18385 a6cc1c3f17ff2019d9ab1c5bdf0d568c 98 SUPERFAMILY SSF47413 42 89 1.5E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS18385 a6cc1c3f17ff2019d9ab1c5bdf0d568c 98 Pfam PF01381 Helix-turn-helix 42 77 1.7E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PIRSF PIRSF000099 2 431 1.1E-166 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 231 263 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 37 427 5.5E-159 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 Gene3D G3DSA:3.40.50.1980 31 241 5.2E-81 T 22-04-2016 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PANTHER PTHR21256 1 434 1.4E-294 T 22-04-2016 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 SUPERFAMILY SSF53720 9 428 3.92E-85 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 428 40.842 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PANTHER PTHR21256:SF14 1 434 1.4E-294 T 22-04-2016 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 Pfam PF00815 Histidinol dehydrogenase 29 428 4.1E-163 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PRINTS PR00083 Histidinol dehydrogenase signature 253 272 9.72E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 9.72E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 9.72E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PRINTS PR00083 Histidinol dehydrogenase signature 110 137 9.72E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 9.72E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PRINTS PR00083 Histidinol dehydrogenase signature 231 252 9.72E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 9.72E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS06225 c69c7982543795b03586f5e91c25776f 435 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 9.72E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 PIRSF PIRSF006769 1 367 4.4E-134 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 PANTHER PTHR11079:SF10 3 232 1.6E-71 T 22-04-2016 LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 Pfam PF01872 RibD C-terminal domain 147 360 4.0E-57 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 Gene3D G3DSA:3.40.430.10 129 363 1.4E-66 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 SUPERFAMILY SSF53597 144 363 1.2E-56 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 PANTHER PTHR11079 3 232 1.6E-71 T 22-04-2016 LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 362 3.7E-148 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 Gene3D G3DSA:3.40.140.10 2 128 3.7E-37 T 22-04-2016 LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 1.4E-21 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 SUPERFAMILY SSF53927 3 145 1.42E-50 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LK04_RS14110 a1b7dc9cd70ec04220e728be82bd91c5 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 365 5.8E-75 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 LK04_RS00080 38dba22ec6d7773b01d48a93e3d0adf9 299 PANTHER PTHR30465 16 299 6.0E-116 T 22-04-2016 LK04_RS00080 38dba22ec6d7773b01d48a93e3d0adf9 299 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 75 1.2E-13 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS00080 38dba22ec6d7773b01d48a93e3d0adf9 299 PANTHER PTHR30465:SF10 16 299 6.0E-116 T 22-04-2016 LK04_RS00080 38dba22ec6d7773b01d48a93e3d0adf9 299 SUPERFAMILY SSF161098 91 280 3.01E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00080 38dba22ec6d7773b01d48a93e3d0adf9 299 Gene3D G3DSA:1.10.3720.10 88 296 4.3E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00080 38dba22ec6d7773b01d48a93e3d0adf9 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 297 5.6E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14915 47e831a12fcdfa57b0541d2e3c652ef9 208 Gene3D G3DSA:3.30.420.10 10 151 4.3E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS14915 47e831a12fcdfa57b0541d2e3c652ef9 208 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.745 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 LK04_RS14915 47e831a12fcdfa57b0541d2e3c652ef9 208 Pfam PF01351 Ribonuclease HII 13 189 2.5E-40 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain LK04_RS14915 47e831a12fcdfa57b0541d2e3c652ef9 208 PANTHER PTHR10954 1 194 1.5E-86 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 LK04_RS14915 47e831a12fcdfa57b0541d2e3c652ef9 208 SUPERFAMILY SSF53098 4 194 9.41E-72 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS08130 1be1284a87754ea1aed218935935d352 107 SUPERFAMILY SSF102816 1 107 1.57E-49 T 22-04-2016 IPR007376 dsDNA mimic, putative LK04_RS08130 1be1284a87754ea1aed218935935d352 107 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 107 33.695 T 22-04-2016 IPR007376 dsDNA mimic, putative LK04_RS08130 1be1284a87754ea1aed218935935d352 107 Gene3D G3DSA:3.10.450.140 7 107 3.0E-48 T 22-04-2016 IPR007376 dsDNA mimic, putative LK04_RS08130 1be1284a87754ea1aed218935935d352 107 PIRSF PIRSF004916 1 107 6.8E-54 T 22-04-2016 IPR007376 dsDNA mimic, putative LK04_RS08130 1be1284a87754ea1aed218935935d352 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 107 4.0E-50 T 22-04-2016 IPR007376 dsDNA mimic, putative LK04_RS08130 1be1284a87754ea1aed218935935d352 107 Pfam PF04269 Protein of unknown function, DUF440 6 107 6.1E-45 T 22-04-2016 IPR007376 dsDNA mimic, putative LK04_RS07300 30772a646269bec5725d2690a1c06ec0 417 SUPERFAMILY SSF53850 43 278 1.71E-32 T 22-04-2016 LK04_RS07300 30772a646269bec5725d2690a1c06ec0 417 Gene3D G3DSA:3.40.190.10 163 267 3.2E-6 T 22-04-2016 LK04_RS07300 30772a646269bec5725d2690a1c06ec0 417 PANTHER PTHR30024 6 415 7.7E-144 T 22-04-2016 LK04_RS07300 30772a646269bec5725d2690a1c06ec0 417 PANTHER PTHR30024:SF7 6 415 7.7E-144 T 22-04-2016 LK04_RS07300 30772a646269bec5725d2690a1c06ec0 417 Pfam PF13379 NMT1-like family 39 290 3.9E-108 T 22-04-2016 LK04_RS05300 fff1bdf656c57bcd8765a5c04f6c263b 93 Pfam PF08891 YfcL protein 4 86 3.2E-35 T 22-04-2016 IPR014987 Uncharacterised protein family YfcL LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 SUPERFAMILY SSF55347 135 355 3.42E-79 T 22-04-2016 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 1.2E-215 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 PANTHER PTHR10174 202 369 5.7E-161 T 22-04-2016 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 PANTHER PTHR10174 104 180 5.7E-161 T 22-04-2016 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.335 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 354 1.4E-59 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 Gene3D G3DSA:3.30.360.10 144 351 1.5E-77 T 22-04-2016 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 Gene3D G3DSA:3.40.50.720 1 143 2.2E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 SUPERFAMILY SSF51735 1 148 1.79E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 PANTHER PTHR10174:SF116 202 369 5.7E-161 T 22-04-2016 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 PANTHER PTHR10174:SF116 104 180 5.7E-161 T 22-04-2016 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 122 2.1E-24 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 SMART SM00859 3 123 3.0E-25 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LK04_RS17590 1bccbd5f0baa68316dd7d0d9ad6a44e3 369 PIRSF PIRSF000148 1 369 3.0E-71 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LK04_RS17745 e4b7bba5f75d8469b6a450313eb2d485 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 44.605 T 22-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 LK04_RS17745 e4b7bba5f75d8469b6a450313eb2d485 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LK04_RS17745 e4b7bba5f75d8469b6a450313eb2d485 257 SUPERFAMILY SSF55811 3 96 8.11E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS17745 e4b7bba5f75d8469b6a450313eb2d485 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 9.6E-8 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 LK04_RS17745 e4b7bba5f75d8469b6a450313eb2d485 257 Gene3D G3DSA:3.90.79.10 93 244 9.1E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS17745 e4b7bba5f75d8469b6a450313eb2d485 257 PANTHER PTHR22769:SF7 85 257 6.0E-52 T 22-04-2016 LK04_RS17745 e4b7bba5f75d8469b6a450313eb2d485 257 SUPERFAMILY SSF55811 79 239 4.6E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS17745 e4b7bba5f75d8469b6a450313eb2d485 257 Pfam PF00293 NUDIX domain 132 244 1.1E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS17745 e4b7bba5f75d8469b6a450313eb2d485 257 PANTHER PTHR22769 85 257 6.0E-52 T 22-04-2016 LK04_RS17950 7997d5d974f80340125d30b290e476e0 201 Pfam PF02036 SCP-2 sterol transfer family 15 113 3.4E-21 T 22-04-2016 IPR003033 SCP2 sterol-binding domain LK04_RS17950 7997d5d974f80340125d30b290e476e0 201 PANTHER PTHR38693:SF1 1 201 1.4E-60 T 22-04-2016 LK04_RS17950 7997d5d974f80340125d30b290e476e0 201 PANTHER PTHR38693 1 201 1.4E-60 T 22-04-2016 LK04_RS17950 7997d5d974f80340125d30b290e476e0 201 SUPERFAMILY SSF55718 11 116 1.47E-8 T 22-04-2016 IPR003033 SCP2 sterol-binding domain LK04_RS10055 84d4c0daa0f68789053d77aa2f0791d1 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 316 3.7E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS10055 84d4c0daa0f68789053d77aa2f0791d1 328 PANTHER PTHR32196 21 326 1.4E-228 T 22-04-2016 LK04_RS10055 84d4c0daa0f68789053d77aa2f0791d1 328 PANTHER PTHR32196:SF37 21 326 1.4E-228 T 22-04-2016 LK04_RS10100 632ef17492644012f934d4a83a5eb106 318 SUPERFAMILY SSF53822 23 307 3.7E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS10100 632ef17492644012f934d4a83a5eb106 318 PANTHER PTHR32196 1 280 1.0E-152 T 22-04-2016 LK04_RS10100 632ef17492644012f934d4a83a5eb106 318 Gene3D G3DSA:3.40.50.2300 24 139 1.1E-28 T 22-04-2016 LK04_RS10100 632ef17492644012f934d4a83a5eb106 318 Gene3D G3DSA:3.40.50.2300 140 307 1.1E-44 T 22-04-2016 LK04_RS10100 632ef17492644012f934d4a83a5eb106 318 PANTHER PTHR32196:SF20 1 280 1.0E-152 T 22-04-2016 LK04_RS10100 632ef17492644012f934d4a83a5eb106 318 Pfam PF13407 Periplasmic binding protein domain 26 274 4.0E-44 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS14665 69f8032a61383ca4da3a3fec338c7c9f 256 Pfam PF00795 Carbon-nitrogen hydrolase 17 241 2.0E-30 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS14665 69f8032a61383ca4da3a3fec338c7c9f 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site LK04_RS14665 69f8032a61383ca4da3a3fec338c7c9f 256 PANTHER PTHR23088:SF28 1 251 2.6E-135 T 22-04-2016 LK04_RS14665 69f8032a61383ca4da3a3fec338c7c9f 256 PANTHER PTHR23088 1 251 2.6E-135 T 22-04-2016 LK04_RS14665 69f8032a61383ca4da3a3fec338c7c9f 256 SUPERFAMILY SSF56317 1 249 4.19E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS14665 69f8032a61383ca4da3a3fec338c7c9f 256 Gene3D G3DSA:3.60.110.10 1 253 3.4E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS00465 b3b53234a9d1e00bad5e0acc37b0a64c 637 Pfam PF00294 pfkB family carbohydrate kinase 9 324 1.8E-44 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS00465 b3b53234a9d1e00bad5e0acc37b0a64c 637 SUPERFAMILY SSF53613 7 332 2.81E-72 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS00465 b3b53234a9d1e00bad5e0acc37b0a64c 637 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 327 635 1.6E-140 T 22-04-2016 IPR018659 Protein of unknown function DUF2090 LK04_RS00465 b3b53234a9d1e00bad5e0acc37b0a64c 637 PANTHER PTHR10584 2 356 1.1E-184 T 22-04-2016 LK04_RS00465 b3b53234a9d1e00bad5e0acc37b0a64c 637 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 276 289 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LK04_RS00465 b3b53234a9d1e00bad5e0acc37b0a64c 637 PANTHER PTHR10584:SF194 2 356 1.1E-184 T 22-04-2016 LK04_RS00465 b3b53234a9d1e00bad5e0acc37b0a64c 637 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 8 332 7.5E-124 T 22-04-2016 IPR030830 5-dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92|UniPathway: UPA00076 LK04_RS00465 b3b53234a9d1e00bad5e0acc37b0a64c 637 Gene3D G3DSA:3.40.1190.20 3 335 6.5E-85 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS18895 0dcb9479eecb14347cef4e1e718ca7d7 312 SUPERFAMILY SSF53613 1 309 1.43E-84 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS18895 0dcb9479eecb14347cef4e1e718ca7d7 312 PANTHER PTHR10584 1 311 4.9E-99 T 22-04-2016 LK04_RS18895 0dcb9479eecb14347cef4e1e718ca7d7 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LK04_RS18895 0dcb9479eecb14347cef4e1e718ca7d7 312 PANTHER PTHR10584:SF186 1 311 4.9E-99 T 22-04-2016 LK04_RS18895 0dcb9479eecb14347cef4e1e718ca7d7 312 Pfam PF00294 pfkB family carbohydrate kinase 5 305 7.4E-60 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS18895 0dcb9479eecb14347cef4e1e718ca7d7 312 Gene3D G3DSA:3.40.1190.20 1 309 6.4E-92 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS06390 d631393918676ebbdfd996f26548888c 535 PANTHER PTHR30290 28 532 1.8E-105 T 22-04-2016 LK04_RS06390 d631393918676ebbdfd996f26548888c 535 SUPERFAMILY SSF53850 25 532 1.09E-113 T 22-04-2016 LK04_RS06390 d631393918676ebbdfd996f26548888c 535 PIRSF PIRSF002741 2 534 6.9E-77 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS06390 d631393918676ebbdfd996f26548888c 535 Gene3D G3DSA:3.40.190.10 189 290 3.9E-29 T 22-04-2016 LK04_RS06390 d631393918676ebbdfd996f26548888c 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 451 4.9E-77 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS06390 d631393918676ebbdfd996f26548888c 535 Gene3D G3DSA:3.90.76.10 38 188 1.5E-33 T 22-04-2016 LK04_RS06390 d631393918676ebbdfd996f26548888c 535 Gene3D G3DSA:3.10.105.10 291 501 3.0E-44 T 22-04-2016 LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 Gene3D G3DSA:3.40.50.720 2 247 8.5E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PANTHER PTHR24322 11 139 9.4E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PANTHER PTHR24322 155 187 9.4E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 SUPERFAMILY SSF51735 5 247 4.14E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PANTHER PTHR24322:SF608 11 139 9.4E-52 T 22-04-2016 LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PANTHER PTHR24322:SF608 155 187 9.4E-52 T 22-04-2016 LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 5.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS16365 08cdea3744eb63af038ab1ebb730a315 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 248 7.2E-62 T 22-04-2016 LK04_RS16820 890944a8869151195bfaab6702604d10 256 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 245 40.821 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF LK04_RS16820 890944a8869151195bfaab6702604d10 256 SUPERFAMILY SSF88713 1 251 1.7E-85 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LK04_RS16820 890944a8869151195bfaab6702604d10 256 PANTHER PTHR30292 1 252 2.6E-111 T 22-04-2016 LK04_RS16820 890944a8869151195bfaab6702604d10 256 Pfam PF03746 LamB/YcsF family 3 240 2.4E-89 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF LK04_RS16820 890944a8869151195bfaab6702604d10 256 PANTHER PTHR30292:SF0 1 252 2.6E-111 T 22-04-2016 LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 247 8.7E-60 T 22-04-2016 LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PANTHER PTHR24322 157 188 1.6E-70 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PANTHER PTHR24322 11 141 1.6E-70 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 Gene3D G3DSA:3.40.50.720 5 250 7.4E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 SUPERFAMILY SSF51735 5 249 7.27E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 7.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 7.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 7.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PANTHER PTHR24322:SF402 157 188 1.6E-70 T 22-04-2016 LK04_RS12750 8f4716c833dfd174fd602a4b4e011825 259 PANTHER PTHR24322:SF402 11 141 1.6E-70 T 22-04-2016 LK04_RS10420 ef35f9966a154354c5ce90d5de175f0f 153 PANTHER PTHR21666:SF210 1 153 2.9E-39 T 22-04-2016 LK04_RS10420 ef35f9966a154354c5ce90d5de175f0f 153 Pfam PF00877 NlpC/P60 family 46 152 1.0E-27 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS10420 ef35f9966a154354c5ce90d5de175f0f 153 Gene3D G3DSA:3.90.1720.10 35 153 2.5E-38 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS10420 ef35f9966a154354c5ce90d5de175f0f 153 PANTHER PTHR21666 1 153 2.9E-39 T 22-04-2016 LK04_RS10420 ef35f9966a154354c5ce90d5de175f0f 153 SUPERFAMILY SSF54001 33 153 1.22E-38 T 22-04-2016 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 SUPERFAMILY SSF56059 97 302 2.98E-54 T 22-04-2016 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 7.0E-102 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 SUPERFAMILY SSF52440 3 96 3.84E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 2.0E-64 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 34.633 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 PIRSF PIRSF039102 40 306 2.4E-89 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 Gene3D G3DSA:3.30.470.20 180 305 2.8E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 Gene3D G3DSA:3.30.470.20 85 103 2.8E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 4.9E-18 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 Gene3D G3DSA:3.40.50.20 3 84 9.8E-26 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 Gene3D G3DSA:3.30.1490.20 120 179 4.2E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LK04_RS15395 0f823754eb7359512ace9f9fe992f03a 306 PANTHER PTHR23132 1 305 9.2E-90 T 22-04-2016 LK04_RS10835 04874ae3595726935bb6296c7f772540 311 PANTHER PTHR11358 45 268 6.2E-15 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LK04_RS10835 04874ae3595726935bb6296c7f772540 311 Gene3D G3DSA:3.40.800.10 4 302 1.7E-39 T 22-04-2016 IPR023696 Ureohydrolase domain LK04_RS10835 04874ae3595726935bb6296c7f772540 311 SUPERFAMILY SSF52768 4 302 3.42E-40 T 22-04-2016 LK04_RS10835 04874ae3595726935bb6296c7f772540 311 Pfam PF00491 Arginase family 66 300 2.9E-20 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LK04_RS18825 bbc23872a3f235291cbb4278e4ad7b59 430 SUPERFAMILY SSF103473 7 426 2.09E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS18825 bbc23872a3f235291cbb4278e4ad7b59 430 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 23 423 6.6E-140 T 22-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS18825 bbc23872a3f235291cbb4278e4ad7b59 430 PIRSF PIRSF002808 1 429 1.3E-34 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS18825 bbc23872a3f235291cbb4278e4ad7b59 430 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 22 405 9.1E-124 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS18825 bbc23872a3f235291cbb4278e4ad7b59 430 PANTHER PTHR11662 2 423 2.3E-163 T 22-04-2016 LK04_RS18825 bbc23872a3f235291cbb4278e4ad7b59 430 PANTHER PTHR11662:SF277 2 423 2.3E-163 T 22-04-2016 LK04_RS18825 bbc23872a3f235291cbb4278e4ad7b59 430 Gene3D G3DSA:1.20.1250.20 237 425 1.1E-26 T 22-04-2016 LK04_RS18825 bbc23872a3f235291cbb4278e4ad7b59 430 Pfam PF07690 Major Facilitator Superfamily 21 389 2.6E-56 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS18825 bbc23872a3f235291cbb4278e4ad7b59 430 Gene3D G3DSA:1.20.1250.20 9 197 4.3E-46 T 22-04-2016 LK04_RS07955 d5e08a6e652b6782011c1c01174dca73 425 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 41.851 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 LK04_RS07955 d5e08a6e652b6782011c1c01174dca73 425 PANTHER PTHR30510 1 425 5.2E-196 T 22-04-2016 LK04_RS07955 d5e08a6e652b6782011c1c01174dca73 425 Pfam PF04285 Protein of unknown function (DUF444) 4 421 2.1E-187 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 LK04_RS03095 2458ef65f92d49b991ea59bc3c9e83ae 387 Pfam PF07690 Major Facilitator Superfamily 8 316 3.2E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS03095 2458ef65f92d49b991ea59bc3c9e83ae 387 PANTHER PTHR23501 1 377 3.3E-165 T 22-04-2016 LK04_RS03095 2458ef65f92d49b991ea59bc3c9e83ae 387 SUPERFAMILY SSF103473 3 377 1.57E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS03095 2458ef65f92d49b991ea59bc3c9e83ae 387 Gene3D G3DSA:1.20.1250.20 5 185 9.0E-30 T 22-04-2016 LK04_RS03095 2458ef65f92d49b991ea59bc3c9e83ae 387 Gene3D G3DSA:1.20.1250.20 200 379 7.0E-14 T 22-04-2016 LK04_RS03095 2458ef65f92d49b991ea59bc3c9e83ae 387 PANTHER PTHR23501:SF4 1 377 3.3E-165 T 22-04-2016 LK04_RS06305 f3b69b5a6737a04ab451a3217c854af9 259 PIRSF PIRSF006241 1 259 4.3E-87 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 LK04_RS06305 f3b69b5a6737a04ab451a3217c854af9 259 PANTHER PTHR12110:SF12 1 257 9.8E-139 T 22-04-2016 LK04_RS06305 f3b69b5a6737a04ab451a3217c854af9 259 Gene3D G3DSA:3.20.20.150 1 257 3.1E-90 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS06305 f3b69b5a6737a04ab451a3217c854af9 259 PANTHER PTHR12110 1 257 9.8E-139 T 22-04-2016 LK04_RS06305 f3b69b5a6737a04ab451a3217c854af9 259 SUPERFAMILY SSF51658 1 258 3.32E-84 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS06305 f3b69b5a6737a04ab451a3217c854af9 259 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.7E-34 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS13605 ad4ee961d349004855d2eaa40507cf3a 293 PANTHER PTHR23024:SF47 61 293 6.0E-47 T 22-04-2016 LK04_RS13605 ad4ee961d349004855d2eaa40507cf3a 293 PANTHER PTHR23024 61 293 6.0E-47 T 22-04-2016 LK04_RS13605 ad4ee961d349004855d2eaa40507cf3a 293 Pfam PF07859 alpha/beta hydrolase fold 74 271 9.6E-45 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LK04_RS13605 ad4ee961d349004855d2eaa40507cf3a 293 Gene3D G3DSA:3.40.50.1820 38 292 1.2E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS13605 ad4ee961d349004855d2eaa40507cf3a 293 SUPERFAMILY SSF53474 40 293 2.57E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 3.3E-128 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 PANTHER PTHR11265 1 313 1.1E-153 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 38.38 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 Gene3D G3DSA:3.40.50.150 7 110 1.6E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 Gene3D G3DSA:3.40.50.150 216 311 1.6E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 PANTHER PTHR11265:SF0 1 313 1.1E-153 T 22-04-2016 LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 PIRSF PIRSF004486 1 312 1.6E-100 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 SUPERFAMILY SSF53335 7 113 1.46E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 SUPERFAMILY SSF53335 213 310 1.46E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 Gene3D G3DSA:1.10.150.170 112 215 5.7E-37 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 SUPERFAMILY SSF81799 114 213 2.62E-34 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS15445 fcd733b23a9767300f65617442bd84b5 313 Pfam PF01795 MraW methylase family 4 310 1.2E-117 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PANTHER PTHR11922 1 523 9.8E-294 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PANTHER PTHR11922:SF2 1 523 9.8E-294 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PRINTS PR00097 Anthranilate synthase component II signature 82 93 1.4E-6 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PRINTS PR00097 Anthranilate synthase component II signature 178 191 1.4E-6 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PRINTS PR00097 Anthranilate synthase component II signature 55 64 1.4E-6 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 SUPERFAMILY SSF52317 6 205 1.47E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 Gene3D G3DSA:3.30.300.10 402 526 1.4E-53 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 Gene3D G3DSA:3.40.50.620 224 400 1.0E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 SUPERFAMILY SSF52402 198 421 6.17E-59 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 8 526 56.555 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 SUPERFAMILY SSF54810 406 526 1.83E-51 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 Pfam PF02540 NAD synthase 216 258 8.5E-7 T 22-04-2016 IPR022310 NAD/GMP synthase LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 52 66 3.5E-6 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 82 98 3.5E-6 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 11 25 3.5E-6 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 526 1.4E-155 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 Pfam PF00117 Glutamine amidotransferase class-I 13 200 1.9E-40 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 Gene3D G3DSA:3.40.50.880 3 223 2.6E-61 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 Pfam PF00958 GMP synthase C terminal domain 434 525 7.0E-44 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 1.2E-7 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 55 64 1.2E-7 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 178 191 1.2E-7 T 22-04-2016 LK04_RS04255 c893db6b4d44ebdc73444121405be730 526 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 11 206 3.7E-84 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LK04_RS09070 6fdecfc31979c2767d57d56ec21bab70 272 Gene3D G3DSA:1.10.3720.10 12 260 1.9E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09070 6fdecfc31979c2767d57d56ec21bab70 272 PANTHER PTHR32243 1 272 7.8E-84 T 22-04-2016 LK04_RS09070 6fdecfc31979c2767d57d56ec21bab70 272 PANTHER PTHR32243:SF7 1 272 7.8E-84 T 22-04-2016 LK04_RS09070 6fdecfc31979c2767d57d56ec21bab70 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 262 1.8E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09070 6fdecfc31979c2767d57d56ec21bab70 272 SUPERFAMILY SSF161098 12 271 4.21E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.5E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.5E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.5E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 Gene3D G3DSA:3.40.190.10 90 177 9.6E-28 T 22-04-2016 LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.2E-24 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 PANTHER PTHR30346 1 292 3.5E-114 T 22-04-2016 LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 Pfam PF03466 LysR substrate binding domain 89 293 1.3E-46 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 PANTHER PTHR30346:SF7 1 292 3.5E-114 T 22-04-2016 LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 Gene3D G3DSA:1.10.10.10 1 82 3.8E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 Gene3D G3DSA:3.40.190.10 178 269 1.6E-26 T 22-04-2016 LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 SUPERFAMILY SSF46785 4 89 1.43E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08715 18e985d26babbc2d18318cb60c569a8a 298 SUPERFAMILY SSF53850 90 295 1.71E-39 T 22-04-2016 LK04_RS01165 6b9e5652a42858feb0ff65c2a5d83a93 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 73.872 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LK04_RS01165 6b9e5652a42858feb0ff65c2a5d83a93 150 SUPERFAMILY SSF52304 6 148 1.96E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LK04_RS01165 6b9e5652a42858feb0ff65c2a5d83a93 150 Pfam PF01220 Dehydroquinase class II 7 142 6.2E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LK04_RS01165 6b9e5652a42858feb0ff65c2a5d83a93 150 PANTHER PTHR21272 2 146 4.8E-89 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LK04_RS01165 6b9e5652a42858feb0ff65c2a5d83a93 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 6.3E-63 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LK04_RS01165 6b9e5652a42858feb0ff65c2a5d83a93 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 150 2.0E-56 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LK04_RS01165 6b9e5652a42858feb0ff65c2a5d83a93 150 Gene3D G3DSA:3.40.50.9100 5 147 4.0E-68 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LK04_RS01165 6b9e5652a42858feb0ff65c2a5d83a93 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LK04_RS01165 6b9e5652a42858feb0ff65c2a5d83a93 150 PIRSF PIRSF001399 3 149 8.3E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LK04_RS04705 363326ac3b0d9ceccac2bd706631251e 116 Pfam PF14282 FlxA-like protein 5 109 2.3E-27 T 22-04-2016 IPR025577 FlxA-like protein LK04_RS02900 a4d32e3aef571a3ec25783ca559371a9 758 Pfam PF12831 FAD dependent oxidoreductase 20 432 7.1E-95 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02900 a4d32e3aef571a3ec25783ca559371a9 758 Gene3D G3DSA:3.40.50.720 16 170 8.6E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02900 a4d32e3aef571a3ec25783ca559371a9 758 SUPERFAMILY SSF51905 12 171 1.34E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS02900 a4d32e3aef571a3ec25783ca559371a9 758 SUPERFAMILY SSF51905 358 407 1.34E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS05735 4c3920d7f34a1a9ae0b3dde18f1f2b69 521 PANTHER PTHR33121 237 518 9.5E-102 T 22-04-2016 LK04_RS05735 4c3920d7f34a1a9ae0b3dde18f1f2b69 521 Pfam PF00563 EAL domain 271 504 2.1E-63 T 22-04-2016 IPR001633 EAL domain LK04_RS05735 4c3920d7f34a1a9ae0b3dde18f1f2b69 521 PANTHER PTHR33121:SF1 237 518 9.5E-102 T 22-04-2016 LK04_RS05735 4c3920d7f34a1a9ae0b3dde18f1f2b69 521 SUPERFAMILY SSF141868 271 516 1.09E-71 T 22-04-2016 IPR001633 EAL domain LK04_RS05735 4c3920d7f34a1a9ae0b3dde18f1f2b69 521 Pfam PF12792 CSS motif domain associated with EAL 46 234 4.9E-31 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LK04_RS05735 4c3920d7f34a1a9ae0b3dde18f1f2b69 521 Gene3D G3DSA:3.20.20.450 271 517 4.7E-74 T 22-04-2016 IPR001633 EAL domain LK04_RS05735 4c3920d7f34a1a9ae0b3dde18f1f2b69 521 SMART SM00052 264 509 1.9E-87 T 22-04-2016 IPR001633 EAL domain LK04_RS18770 24c0f9cd22f9cf04af5af6499c14e07b 361 PANTHER PTHR32182:SF0 1 355 1.3E-75 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LK04_RS18770 24c0f9cd22f9cf04af5af6499c14e07b 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 99.462 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LK04_RS18770 24c0f9cd22f9cf04af5af6499c14e07b 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 LK04_RS18770 24c0f9cd22f9cf04af5af6499c14e07b 361 PANTHER PTHR32182 1 355 1.3E-75 T 22-04-2016 LK04_RS18770 24c0f9cd22f9cf04af5af6499c14e07b 361 SUPERFAMILY SSF52540 1 342 9.94E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18770 24c0f9cd22f9cf04af5af6499c14e07b 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 2.0E-135 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LK04_RS18770 24c0f9cd22f9cf04af5af6499c14e07b 361 Gene3D G3DSA:3.40.50.300 230 343 5.7E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18770 24c0f9cd22f9cf04af5af6499c14e07b 361 Gene3D G3DSA:3.40.50.300 1 171 5.7E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18770 24c0f9cd22f9cf04af5af6499c14e07b 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 LK04_RS18770 24c0f9cd22f9cf04af5af6499c14e07b 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 353 9.5E-40 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal LK04_RS02480 5d396869f180de42d6fef93ec5e30078 181 Pfam PF01638 HxlR-like helix-turn-helix 20 106 2.0E-21 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type LK04_RS02480 5d396869f180de42d6fef93ec5e30078 181 SUPERFAMILY SSF46785 6 144 2.43E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02480 5d396869f180de42d6fef93ec5e30078 181 Gene3D G3DSA:1.10.10.10 2 109 7.6E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02480 5d396869f180de42d6fef93ec5e30078 181 PANTHER PTHR33204:SF10 1 160 1.1E-51 T 22-04-2016 LK04_RS02480 5d396869f180de42d6fef93ec5e30078 181 PANTHER PTHR33204 1 160 1.1E-51 T 22-04-2016 LK04_RS01980 3972e5418adcc6a4d5846afb96736573 490 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 437 1.0E-133 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LK04_RS01980 3972e5418adcc6a4d5846afb96736573 490 Gene3D G3DSA:1.20.1600.10 14 432 1.9E-92 T 22-04-2016 LK04_RS01980 3972e5418adcc6a4d5846afb96736573 490 SUPERFAMILY SSF56954 25 445 3.66E-99 T 22-04-2016 LK04_RS01980 3972e5418adcc6a4d5846afb96736573 490 PANTHER PTHR30026 1 451 2.1E-167 T 22-04-2016 LK04_RS01980 3972e5418adcc6a4d5846afb96736573 490 Pfam PF02321 Outer membrane efflux protein 25 209 4.5E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS01980 3972e5418adcc6a4d5846afb96736573 490 Pfam PF02321 Outer membrane efflux protein 232 425 1.0E-35 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS01980 3972e5418adcc6a4d5846afb96736573 490 PANTHER PTHR30026:SF3 1 451 2.1E-167 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LK04_RS09425 fbcbb2a1fe3695bc5bc343631a93c084 301 Gene3D G3DSA:1.10.3720.10 93 298 2.9E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09425 fbcbb2a1fe3695bc5bc343631a93c084 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 77 1.1E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS09425 fbcbb2a1fe3695bc5bc343631a93c084 301 SUPERFAMILY SSF161098 95 282 4.58E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09425 fbcbb2a1fe3695bc5bc343631a93c084 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 5.8E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09425 fbcbb2a1fe3695bc5bc343631a93c084 301 PANTHER PTHR30465:SF10 18 301 3.9E-111 T 22-04-2016 LK04_RS09425 fbcbb2a1fe3695bc5bc343631a93c084 301 PANTHER PTHR30465 18 301 3.9E-111 T 22-04-2016 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 PANTHER PTHR32282:SF5 2 310 2.8E-283 T 22-04-2016 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 Pfam PF00912 Transglycosylase 55 229 3.2E-65 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 SUPERFAMILY SSF56601 671 835 9.33E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 SUPERFAMILY SSF56601 422 610 9.33E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 SUPERFAMILY SSF56601 211 233 9.33E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 SUPERFAMILY SSF56601 262 313 9.33E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 SUPERFAMILY SSF53955 43 256 7.31E-81 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 PANTHER PTHR32282 421 612 2.8E-283 T 22-04-2016 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 PANTHER PTHR32282:SF5 421 612 2.8E-283 T 22-04-2016 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 PANTHER PTHR32282:SF5 671 842 2.8E-283 T 22-04-2016 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 PANTHER PTHR32282 2 310 2.8E-283 T 22-04-2016 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 2.1E-29 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 Gene3D G3DSA:3.40.710.10 422 611 2.5E-129 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 Gene3D G3DSA:3.40.710.10 672 832 2.5E-129 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 Gene3D G3DSA:3.40.710.10 232 313 2.5E-129 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 608 4.0E-23 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 781 2.1E-173 T 22-04-2016 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 PANTHER PTHR32282 671 842 2.8E-283 T 22-04-2016 LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 Gene3D G3DSA:2.40.50.140 347 421 3.7E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS00605 08a3eff1a17eb77864d7ea793298a932 849 Gene3D G3DSA:1.10.3810.10 55 231 3.4E-76 T 22-04-2016 LK04_RS11575 a6bf932236bad5a8c50448b789e4f95c 203 SUPERFAMILY SSF89392 21 186 7.06E-19 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX LK04_RS11575 a6bf932236bad5a8c50448b789e4f95c 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 188 1.0E-8 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like LK04_RS11575 a6bf932236bad5a8c50448b789e4f95c 203 Gene3D G3DSA:2.50.20.10 21 188 1.8E-15 T 22-04-2016 LK04_RS11915 ab9caa15136f1e60fbb53eccd5b3d66c 180 Pfam PF07126 Cell-division protein ZapC 2 170 1.3E-72 T 22-04-2016 IPR009809 Cell division protein ZapC LK04_RS11915 ab9caa15136f1e60fbb53eccd5b3d66c 180 PIRSF PIRSF010252 1 179 5.4E-63 T 22-04-2016 IPR009809 Cell division protein ZapC LK04_RS11915 ab9caa15136f1e60fbb53eccd5b3d66c 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 39.385 T 22-04-2016 IPR009809 Cell division protein ZapC LK04_RS19320 2c21a329848da92280a28ed5e4afb597 429 SUPERFAMILY SSF56935 25 429 1.88E-130 T 22-04-2016 LK04_RS19320 2c21a329848da92280a28ed5e4afb597 429 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 424 1.0E-154 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 LK04_RS19320 2c21a329848da92280a28ed5e4afb597 429 Gene3D G3DSA:2.40.170.10 25 429 2.5E-147 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 LK04_RS19320 2c21a329848da92280a28ed5e4afb597 429 Pfam PF02264 LamB porin 27 429 2.6E-130 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 LK04_RS19320 2c21a329848da92280a28ed5e4afb597 429 PANTHER PTHR38762 1 429 3.5E-150 T 22-04-2016 LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 PANTHER PTHR11751:SF389 9 111 4.1E-41 T 22-04-2016 LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 6.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 6.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 Gene3D G3DSA:1.10.10.10 6 77 3.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 Gene3D G3DSA:1.20.120.530 92 232 7.5E-32 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 SMART SM00345 14 73 3.0E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 SMART SM00895 95 224 2.7E-21 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 PANTHER PTHR11751 9 111 4.1E-41 T 22-04-2016 LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 SUPERFAMILY SSF48008 93 232 5.23E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 SUPERFAMILY SSF46785 4 77 2.85E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 3.4E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS09390 c859d739b2aef95b017a8f3e5c1709f9 260 Pfam PF07729 FCD domain 95 223 8.4E-22 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 PANTHER PTHR24423 180 462 3.7E-138 T 22-04-2016 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 457 3.1E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 PANTHER PTHR24423:SF531 180 462 3.7E-138 T 22-04-2016 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 4.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 4.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 4.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 SUPERFAMILY SSF47384 222 303 4.51E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 Gene3D G3DSA:1.10.287.130 231 289 5.8E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 SUPERFAMILY SSF158472 187 235 3.53E-10 T 22-04-2016 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 SMART SM00388 239 303 7.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 303 2.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 Pfam PF00672 HAMP domain 167 234 8.1E-17 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 SMART SM00304 186 238 2.0E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 SMART SM00387 348 460 2.9E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 Gene3D G3DSA:3.30.565.10 290 460 1.1E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS05985 ae2f18f4babbee89bd4f01818d9cf650 463 SUPERFAMILY SSF55874 292 460 6.02E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 27.732 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 Gene3D G3DSA:1.20.1640.10 113 303 1.0E-24 T 22-04-2016 LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 Pfam PF07549 SecD/SecF GG Motif 41 66 5.9E-11 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 1.3E-82 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 Pfam PF02355 Protein export membrane protein 115 300 3.6E-66 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 SUPERFAMILY SSF82866 79 302 1.57E-38 T 22-04-2016 LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 2.7E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 2.7E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 2.7E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 2.7E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 PANTHER PTHR30081 6 317 2.4E-85 T 22-04-2016 LK04_RS14130 8262440bb0a8c17fed6fb3316cbb06e0 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 124 288 1.0E-52 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LK04_RS16865 24d14e437f9711d1e4edfc38defef88c 307 Pfam PF01261 Xylose isomerase-like TIM barrel 29 259 8.4E-36 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS16865 24d14e437f9711d1e4edfc38defef88c 307 Gene3D G3DSA:3.20.20.150 1 305 5.0E-73 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS16865 24d14e437f9711d1e4edfc38defef88c 307 PANTHER PTHR12110:SF4 92 285 6.9E-31 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 LK04_RS16865 24d14e437f9711d1e4edfc38defef88c 307 PANTHER PTHR12110:SF4 25 70 6.9E-31 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 LK04_RS16865 24d14e437f9711d1e4edfc38defef88c 307 SUPERFAMILY SSF51658 3 304 2.36E-51 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS16865 24d14e437f9711d1e4edfc38defef88c 307 PANTHER PTHR12110 92 285 6.9E-31 T 22-04-2016 LK04_RS16865 24d14e437f9711d1e4edfc38defef88c 307 PANTHER PTHR12110 25 70 6.9E-31 T 22-04-2016 LK04_RS16270 4b9ce8405b49a819218289fe8a3ba1c8 167 PANTHER PTHR13947 1 167 1.2E-56 T 22-04-2016 LK04_RS16270 4b9ce8405b49a819218289fe8a3ba1c8 167 Gene3D G3DSA:3.40.630.30 8 166 8.6E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS16270 4b9ce8405b49a819218289fe8a3ba1c8 167 PANTHER PTHR13947:SF7 1 167 1.2E-56 T 22-04-2016 LK04_RS16270 4b9ce8405b49a819218289fe8a3ba1c8 167 Pfam PF00583 Acetyltransferase (GNAT) family 66 145 9.5E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS16270 4b9ce8405b49a819218289fe8a3ba1c8 167 SUPERFAMILY SSF55729 8 167 7.89E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS02330 8bd51653194c05537afca724e0b78562 205 SUPERFAMILY SSF52833 1 84 3.03E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS02330 8bd51653194c05537afca724e0b78562 205 Gene3D G3DSA:1.20.1050.10 86 194 5.0E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS02330 8bd51653194c05537afca724e0b78562 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 4.0E-18 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS02330 8bd51653194c05537afca724e0b78562 205 Gene3D G3DSA:3.40.30.10 1 85 4.1E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS02330 8bd51653194c05537afca724e0b78562 205 PANTHER PTHR11260 1 191 1.6E-48 T 22-04-2016 LK04_RS02330 8bd51653194c05537afca724e0b78562 205 SUPERFAMILY SSF47616 71 193 3.62E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS02330 8bd51653194c05537afca724e0b78562 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 123 189 9.8E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal LK04_RS06120 52576d3b6c0c7c34ceeb0bb416eccc80 359 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 328 1.0E-95 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06120 52576d3b6c0c7c34ceeb0bb416eccc80 359 Gene3D G3DSA:3.90.25.10 198 352 7.2E-59 T 22-04-2016 LK04_RS06120 52576d3b6c0c7c34ceeb0bb416eccc80 359 PANTHER PTHR10366 2 355 4.4E-180 T 22-04-2016 LK04_RS06120 52576d3b6c0c7c34ceeb0bb416eccc80 359 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 341 3.7E-152 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LK04_RS06120 52576d3b6c0c7c34ceeb0bb416eccc80 359 PANTHER PTHR10366:SF41 2 355 4.4E-180 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LK04_RS06120 52576d3b6c0c7c34ceeb0bb416eccc80 359 Gene3D G3DSA:3.40.50.720 1 197 7.0E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS06120 52576d3b6c0c7c34ceeb0bb416eccc80 359 SUPERFAMILY SSF51735 1 339 2.38E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 PANTHER PTHR10836 1 332 8.0E-249 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 SMART SM00846 3 150 9.7E-97 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.0E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 2.0E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.0E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.0E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.0E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 4.6E-60 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 7.2E-71 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 SUPERFAMILY SSF51735 3 166 4.02E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 5.4E-134 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 PIRSF PIRSF000149 1 332 9.1E-134 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 SUPERFAMILY SSF55347 149 312 1.71E-80 T 22-04-2016 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 Gene3D G3DSA:3.40.50.720 1 158 2.3E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS07980 df999f3e8bf731309989a4958bdde5b9 332 Gene3D G3DSA:3.30.360.10 159 314 5.5E-86 T 22-04-2016 LK04_RS14680 8ce39ae68bf9da52346229d8e3baee01 164 Gene3D G3DSA:1.10.3330.10 11 162 3.6E-44 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 LK04_RS14680 8ce39ae68bf9da52346229d8e3baee01 164 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 6 162 4.0E-55 T 22-04-2016 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 LK04_RS14680 8ce39ae68bf9da52346229d8e3baee01 164 SUPERFAMILY SSF158694 2 161 2.88E-44 T 22-04-2016 LK04_RS14680 8ce39ae68bf9da52346229d8e3baee01 164 Pfam PF09349 OHCU decarboxylase 7 160 1.0E-38 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 LK04_RS13660 fc1faf0f359b5edbb3ab213850bda679 70 Pfam PF13275 S4 domain 10 69 1.3E-25 T 22-04-2016 LK04_RS13660 fc1faf0f359b5edbb3ab213850bda679 70 PANTHER PTHR32319 8 69 7.2E-26 T 22-04-2016 LK04_RS13660 fc1faf0f359b5edbb3ab213850bda679 70 Gene3D G3DSA:3.10.290.10 3 69 7.6E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS13660 fc1faf0f359b5edbb3ab213850bda679 70 SUPERFAMILY SSF55174 8 69 2.88E-20 T 22-04-2016 LK04_RS16105 a9058fd66415a7b568dd6542c83f978a 393 Pfam PF00144 Beta-lactamase 45 373 2.9E-46 T 22-04-2016 IPR001466 Beta-lactamase-related LK04_RS16105 a9058fd66415a7b568dd6542c83f978a 393 Gene3D G3DSA:3.40.710.10 41 376 3.1E-63 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS16105 a9058fd66415a7b568dd6542c83f978a 393 PANTHER PTHR22935 43 385 3.1E-43 T 22-04-2016 LK04_RS16105 a9058fd66415a7b568dd6542c83f978a 393 SUPERFAMILY SSF56601 43 381 6.8E-62 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS02630 f3c5953ee5a3c984d9be58f8b5530f9e 259 SUPERFAMILY SSF52540 6 235 4.95E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02630 f3c5953ee5a3c984d9be58f8b5530f9e 259 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS02630 f3c5953ee5a3c984d9be58f8b5530f9e 259 PANTHER PTHR24220:SF558 6 255 2.9E-87 T 22-04-2016 LK04_RS02630 f3c5953ee5a3c984d9be58f8b5530f9e 259 SMART SM00382 29 218 2.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS02630 f3c5953ee5a3c984d9be58f8b5530f9e 259 Gene3D G3DSA:3.40.50.300 7 240 7.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02630 f3c5953ee5a3c984d9be58f8b5530f9e 259 PANTHER PTHR24220 6 255 2.9E-87 T 22-04-2016 LK04_RS02630 f3c5953ee5a3c984d9be58f8b5530f9e 259 Pfam PF00005 ABC transporter 21 168 2.9E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS10720 121cb15c67717e189aae9a790e90b8e9 170 SUPERFAMILY SSF55729 1 154 1.1E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS10720 121cb15c67717e189aae9a790e90b8e9 170 Pfam PF00583 Acetyltransferase (GNAT) family 66 146 1.3E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS10720 121cb15c67717e189aae9a790e90b8e9 170 Gene3D G3DSA:3.40.630.30 1 153 1.3E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS13505 5d0088772062bec6d141b2b2c3f03d6b 79 Gene3D G3DSA:3.30.40.10 7 60 4.8E-4 T 22-04-2016 IPR013083 Zinc finger, RING/FYVE/PHD-type LK04_RS13505 5d0088772062bec6d141b2b2c3f03d6b 79 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 5.2E-30 T 22-04-2016 IPR010696 Protein of unknown function DUF1272 LK04_RS11105 5ef63d2bef817c1fdee7c753145d62b3 63 Gene3D G3DSA:3.30.920.30 1 60 1.8E-25 T 22-04-2016 LK04_RS11105 5ef63d2bef817c1fdee7c753145d62b3 63 SUPERFAMILY SSF54786 1 60 4.71E-19 T 22-04-2016 LK04_RS11105 5ef63d2bef817c1fdee7c753145d62b3 63 PANTHER PTHR34873:SF3 1 62 5.6E-17 T 22-04-2016 LK04_RS11105 5ef63d2bef817c1fdee7c753145d62b3 63 PANTHER PTHR34873 1 62 5.6E-17 T 22-04-2016 LK04_RS11105 5ef63d2bef817c1fdee7c753145d62b3 63 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 59 1.0E-21 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 LK04_RS10515 75e69cf288fec064dd968a3a3832a599 196 PANTHER PTHR35531:SF1 1 193 2.2E-56 T 22-04-2016 LK04_RS10515 75e69cf288fec064dd968a3a3832a599 196 PANTHER PTHR35531 1 193 2.2E-56 T 22-04-2016 LK04_RS10515 75e69cf288fec064dd968a3a3832a599 196 PIRSF PIRSF030780 1 195 1.4E-97 T 22-04-2016 IPR016956 Inner membrane protein YdjM LK04_RS10515 75e69cf288fec064dd968a3a3832a599 196 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 157 2.0E-32 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase LK04_RS17100 dc9e2497b17c941a93d12c201c0b99b2 244 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 63 217 1.3E-40 T 22-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 LK04_RS01970 9e96c4d9fcedfc8d05a411d8a91bfd86 387 PANTHER PTHR30094 6 387 3.6E-161 T 22-04-2016 LK04_RS01970 9e96c4d9fcedfc8d05a411d8a91bfd86 387 PANTHER PTHR30094:SF0 6 387 3.6E-161 T 22-04-2016 LK04_RS01970 9e96c4d9fcedfc8d05a411d8a91bfd86 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 385 4.5E-164 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain LK04_RS01970 9e96c4d9fcedfc8d05a411d8a91bfd86 387 SUPERFAMILY SSF52440 174 279 5.47E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LK04_RS01970 9e96c4d9fcedfc8d05a411d8a91bfd86 387 SUPERFAMILY SSF56059 1 168 2.88E-95 T 22-04-2016 LK04_RS01970 9e96c4d9fcedfc8d05a411d8a91bfd86 387 SUPERFAMILY SSF56059 266 383 2.88E-95 T 22-04-2016 LK04_RS05200 ebb7394f65f7f5c70ec186d7ffa390af 77 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 57 2.6E-18 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 LK04_RS05200 ebb7394f65f7f5c70ec186d7ffa390af 77 PANTHER PTHR37531 2 74 8.5E-28 T 22-04-2016 LK04_RS05200 ebb7394f65f7f5c70ec186d7ffa390af 77 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 3.6E-17 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 LK04_RS05200 ebb7394f65f7f5c70ec186d7ffa390af 77 PANTHER PTHR37531:SF1 2 74 8.5E-28 T 22-04-2016 LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 PANTHER PTHR30363:SF16 1 246 1.1E-108 T 22-04-2016 LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.2E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.2E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 SMART SM01134 67 227 6.6E-53 T 22-04-2016 LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 Pfam PF00455 DeoR C terminal sensor domain 72 225 1.8E-41 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 1.1E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 SUPERFAMILY SSF46785 2 58 2.94E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 SUPERFAMILY SSF100950 70 227 1.09E-24 T 22-04-2016 LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 Gene3D G3DSA:3.40.50.1360 72 206 1.1E-9 T 22-04-2016 LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 PANTHER PTHR30363 1 246 1.1E-108 T 22-04-2016 LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 Gene3D G3DSA:1.10.10.10 1 52 9.0E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08885 cabf6654bf21ed6970b00397dd5225e4 246 SMART SM00420 4 56 5.5E-21 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS04185 523653526ab6da669587fad31cb2d60f 389 PANTHER PTHR30544 17 389 8.1E-210 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS04185 523653526ab6da669587fad31cb2d60f 389 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 22 369 74.828 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS04185 523653526ab6da669587fad31cb2d60f 389 Pfam PF04055 Radical SAM superfamily 125 294 4.5E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS04185 523653526ab6da669587fad31cb2d60f 389 PIRSF PIRSF006004 17 382 5.8E-146 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS04185 523653526ab6da669587fad31cb2d60f 389 Gene3D G3DSA:3.20.20.70 122 327 5.2E-16 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS04185 523653526ab6da669587fad31cb2d60f 389 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 19 374 7.5E-172 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS04185 523653526ab6da669587fad31cb2d60f 389 SUPERFAMILY SSF102114 121 332 3.66E-14 T 22-04-2016 LK04_RS04185 523653526ab6da669587fad31cb2d60f 389 PANTHER PTHR30544:SF5 17 389 8.1E-210 T 22-04-2016 LK04_RS03665 0dea9432de4d1b228b5d29c21d01f769 116 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03665 0dea9432de4d1b228b5d29c21d01f769 116 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03665 0dea9432de4d1b228b5d29c21d01f769 116 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03665 0dea9432de4d1b228b5d29c21d01f769 116 SUPERFAMILY SSF50104 2 115 2.61E-47 T 22-04-2016 IPR008991 Translation protein SH3-like domain LK04_RS03665 0dea9432de4d1b228b5d29c21d01f769 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.0E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03665 0dea9432de4d1b228b5d29c21d01f769 116 PIRSF PIRSF002191 1 116 3.2E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03665 0dea9432de4d1b228b5d29c21d01f769 116 PANTHER PTHR15680 1 114 4.5E-58 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03665 0dea9432de4d1b228b5d29c21d01f769 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03665 0dea9432de4d1b228b5d29c21d01f769 116 Pfam PF01245 Ribosomal protein L19 3 113 1.2E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03665 0dea9432de4d1b228b5d29c21d01f769 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.404 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS12455 f99b8ac9e4c7fe595ce86337bd6d5e5c 170 PANTHER PTHR35892:SF3 2 170 3.2E-107 T 22-04-2016 LK04_RS12455 f99b8ac9e4c7fe595ce86337bd6d5e5c 170 PANTHER PTHR35892 2 170 3.2E-107 T 22-04-2016 LK04_RS12455 f99b8ac9e4c7fe595ce86337bd6d5e5c 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 83 106 2.5E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 LK04_RS12455 f99b8ac9e4c7fe595ce86337bd6d5e5c 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 44 56 2.5E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 LK04_RS12455 f99b8ac9e4c7fe595ce86337bd6d5e5c 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 158 169 2.5E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 LK04_RS12455 f99b8ac9e4c7fe595ce86337bd6d5e5c 170 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 131 152 2.5E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 LK04_RS12455 f99b8ac9e4c7fe595ce86337bd6d5e5c 170 Pfam PF13505 Outer membrane protein beta-barrel domain 9 170 3.7E-21 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel LK04_RS12455 f99b8ac9e4c7fe595ce86337bd6d5e5c 170 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 45 53 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 LK04_RS12455 f99b8ac9e4c7fe595ce86337bd6d5e5c 170 Gene3D G3DSA:2.40.160.20 24 170 3.6E-41 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS12455 f99b8ac9e4c7fe595ce86337bd6d5e5c 170 SUPERFAMILY SSF56925 26 170 6.28E-28 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS09880 63b2c165fe7b5ae1b7256a59b7d15531 81 Pfam PF16080 Bacteriophage holin family HP1 6 66 8.1E-12 T 22-04-2016 IPR032118 Bacteriophage holin HP1 family LK04_RS14615 33f41b6ac49845c1bf93b40000c4c3fc 247 PANTHER PTHR36699 6 216 7.9E-62 T 22-04-2016 LK04_RS14615 33f41b6ac49845c1bf93b40000c4c3fc 247 Pfam PF03734 L,D-transpeptidase catalytic domain 46 160 6.0E-6 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 LK04_RS14615 33f41b6ac49845c1bf93b40000c4c3fc 247 SUPERFAMILY SSF141523 42 159 1.44E-8 T 22-04-2016 LK04_RS16960 910e67cdfcd3dae6324d92e6ab0a256a 356 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 349 5.3E-88 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS16960 910e67cdfcd3dae6324d92e6ab0a256a 356 SUPERFAMILY SSF53659 4 356 5.57E-117 T 22-04-2016 LK04_RS16960 910e67cdfcd3dae6324d92e6ab0a256a 356 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 4 355 6.4E-173 T 22-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 LK04_RS16960 910e67cdfcd3dae6324d92e6ab0a256a 356 PANTHER PTHR11835 1 356 6.0E-223 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LK04_RS16960 910e67cdfcd3dae6324d92e6ab0a256a 356 Gene3D G3DSA:3.40.718.10 5 346 2.6E-119 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS16960 910e67cdfcd3dae6324d92e6ab0a256a 356 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LK04_RS16960 910e67cdfcd3dae6324d92e6ab0a256a 356 PANTHER PTHR11835:SF37 1 356 6.0E-223 T 22-04-2016 LK04_RS16960 910e67cdfcd3dae6324d92e6ab0a256a 356 SMART SM01329 7 352 4.3E-181 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS12690 5292b04c0319f11d61db0f65e55e1032 389 PANTHER PTHR22604 2 355 3.2E-83 T 22-04-2016 LK04_RS12690 5292b04c0319f11d61db0f65e55e1032 389 Gene3D G3DSA:3.40.50.720 1 145 2.7E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS12690 5292b04c0319f11d61db0f65e55e1032 389 SUPERFAMILY SSF51735 2 159 2.57E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS12690 5292b04c0319f11d61db0f65e55e1032 389 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 1.3E-12 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS12690 5292b04c0319f11d61db0f65e55e1032 389 Gene3D G3DSA:3.30.360.10 297 346 6.3E-49 T 22-04-2016 LK04_RS12690 5292b04c0319f11d61db0f65e55e1032 389 Gene3D G3DSA:3.30.360.10 146 258 6.3E-49 T 22-04-2016 LK04_RS12690 5292b04c0319f11d61db0f65e55e1032 389 SUPERFAMILY SSF55347 132 262 4.25E-31 T 22-04-2016 LK04_RS12690 5292b04c0319f11d61db0f65e55e1032 389 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 123 1.5E-29 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS12690 5292b04c0319f11d61db0f65e55e1032 389 PANTHER PTHR22604:SF120 2 355 3.2E-83 T 22-04-2016 LK04_RS16435 27f2797d1fc8177cc0b8712c31f7d5b1 277 PANTHER PTHR20941:SF1 15 277 3.2E-128 T 22-04-2016 LK04_RS16435 27f2797d1fc8177cc0b8712c31f7d5b1 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 LK04_RS16435 27f2797d1fc8177cc0b8712c31f7d5b1 277 Gene3D G3DSA:3.20.20.20 13 274 2.9E-111 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 LK04_RS16435 27f2797d1fc8177cc0b8712c31f7d5b1 277 Pfam PF00809 Pterin binding enzyme 18 257 1.6E-89 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 LK04_RS16435 27f2797d1fc8177cc0b8712c31f7d5b1 277 PANTHER PTHR20941 15 277 3.2E-128 T 22-04-2016 LK04_RS16435 27f2797d1fc8177cc0b8712c31f7d5b1 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 1.2E-102 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 LK04_RS16435 27f2797d1fc8177cc0b8712c31f7d5b1 277 SUPERFAMILY SSF51717 9 274 2.75E-104 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 LK04_RS16435 27f2797d1fc8177cc0b8712c31f7d5b1 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 LK04_RS17785 b2a14e7a5ef28fe20a6b8c23af60792e 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.535 T 22-04-2016 IPR022973 Ribosomal protein L10 LK04_RS17785 b2a14e7a5ef28fe20a6b8c23af60792e 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 22-04-2016 LK04_RS17785 b2a14e7a5ef28fe20a6b8c23af60792e 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS17785 b2a14e7a5ef28fe20a6b8c23af60792e 165 Pfam PF00466 Ribosomal protein L10 6 101 2.0E-24 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 LK04_RS17785 b2a14e7a5ef28fe20a6b8c23af60792e 165 PANTHER PTHR11560 1 165 9.2E-60 T 22-04-2016 LK04_RS17785 b2a14e7a5ef28fe20a6b8c23af60792e 165 SUPERFAMILY SSF160369 4 160 3.27E-47 T 22-04-2016 LK04_RS02850 d6c996986b147fa8e5ddba075a81e130 259 PIRSF PIRSF006648 2 254 2.3E-14 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS02850 d6c996986b147fa8e5ddba075a81e130 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 63 85 7.8E-28 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS02850 d6c996986b147fa8e5ddba075a81e130 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 32 53 7.8E-28 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS02850 d6c996986b147fa8e5ddba075a81e130 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 140 164 7.8E-28 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS02850 d6c996986b147fa8e5ddba075a81e130 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 7.8E-28 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS02850 d6c996986b147fa8e5ddba075a81e130 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 7.8E-28 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS02850 d6c996986b147fa8e5ddba075a81e130 259 Pfam PF01061 ABC-2 type transporter 13 218 2.5E-16 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 LK04_RS02850 d6c996986b147fa8e5ddba075a81e130 259 PANTHER PTHR30413 12 259 1.0E-23 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS14850 6cdc5c58e2f43ee76c4094cf72c2519c 271 SUPERFAMILY SSF53850 33 271 3.63E-84 T 22-04-2016 LK04_RS14850 6cdc5c58e2f43ee76c4094cf72c2519c 271 Pfam PF03180 NLPA lipoprotein 33 271 2.1E-101 T 22-04-2016 IPR004872 Lipoprotein NlpA family LK04_RS14850 6cdc5c58e2f43ee76c4094cf72c2519c 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 2.9E-147 T 22-04-2016 IPR004872 Lipoprotein NlpA family LK04_RS14850 6cdc5c58e2f43ee76c4094cf72c2519c 271 PANTHER PTHR30429:SF1 3 271 6.6E-156 T 22-04-2016 LK04_RS14850 6cdc5c58e2f43ee76c4094cf72c2519c 271 PANTHER PTHR30429 3 271 6.6E-156 T 22-04-2016 IPR004872 Lipoprotein NlpA family LK04_RS14850 6cdc5c58e2f43ee76c4094cf72c2519c 271 PIRSF PIRSF002854 1 271 4.0E-107 T 22-04-2016 IPR004872 Lipoprotein NlpA family LK04_RS14850 6cdc5c58e2f43ee76c4094cf72c2519c 271 Gene3D G3DSA:3.40.190.10 30 162 1.9E-61 T 22-04-2016 LK04_RS15510 e7952927bc532d402e6bc7b7dcfc975e 233 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS15510 e7952927bc532d402e6bc7b7dcfc975e 233 SUPERFAMILY SSF52540 1 221 1.52E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15510 e7952927bc532d402e6bc7b7dcfc975e 233 Gene3D G3DSA:3.40.50.300 1 224 1.8E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15510 e7952927bc532d402e6bc7b7dcfc975e 233 PANTHER PTHR24220:SF439 1 230 2.2E-93 T 22-04-2016 LK04_RS15510 e7952927bc532d402e6bc7b7dcfc975e 233 SMART SM00382 24 214 1.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS15510 e7952927bc532d402e6bc7b7dcfc975e 233 PANTHER PTHR24220 1 230 2.2E-93 T 22-04-2016 LK04_RS15510 e7952927bc532d402e6bc7b7dcfc975e 233 Pfam PF00005 ABC transporter 19 157 6.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS15510 e7952927bc532d402e6bc7b7dcfc975e 233 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 6.2E-99 T 22-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 LK04_RS11370 0bfec6b76604a88e87ccab271f5b973f 236 PANTHER PTHR34933:SF1 17 236 1.1E-69 T 22-04-2016 LK04_RS11370 0bfec6b76604a88e87ccab271f5b973f 236 Hamap MF_00415 Flagellar L-ring protein [flgH]. 6 234 27.28 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LK04_RS11370 0bfec6b76604a88e87ccab271f5b973f 236 Pfam PF02107 Flagellar L-ring protein 50 235 2.3E-59 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LK04_RS11370 0bfec6b76604a88e87ccab271f5b973f 236 PANTHER PTHR34933 17 236 1.1E-69 T 22-04-2016 LK04_RS11370 0bfec6b76604a88e87ccab271f5b973f 236 PRINTS PR01008 Flagellar L-ring protein signature 176 192 6.2E-34 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LK04_RS11370 0bfec6b76604a88e87ccab271f5b973f 236 PRINTS PR01008 Flagellar L-ring protein signature 197 211 6.2E-34 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LK04_RS11370 0bfec6b76604a88e87ccab271f5b973f 236 PRINTS PR01008 Flagellar L-ring protein signature 150 165 6.2E-34 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LK04_RS11370 0bfec6b76604a88e87ccab271f5b973f 236 PRINTS PR01008 Flagellar L-ring protein signature 75 87 6.2E-34 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LK04_RS11370 0bfec6b76604a88e87ccab271f5b973f 236 PRINTS PR01008 Flagellar L-ring protein signature 213 227 6.2E-34 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 SUPERFAMILY SSF56801 30 564 2.09E-155 T 22-04-2016 LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 Gene3D G3DSA:3.30.300.30 466 564 1.8E-30 T 22-04-2016 LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 Gene3D G3DSA:3.40.50.980 35 162 1.6E-43 T 22-04-2016 LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 Gene3D G3DSA:3.40.50.980 196 227 1.6E-43 T 22-04-2016 LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 PANTHER PTHR24096 19 164 4.8E-180 T 22-04-2016 LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 PANTHER PTHR24096 187 564 4.8E-180 T 22-04-2016 LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 480 554 3.1E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 Gene3D G3DSA:3.40.50.980 228 390 1.6E-41 T 22-04-2016 LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 ProSitePatterns PS00455 Putative AMP-binding domain signature. 222 233 - T 22-04-2016 IPR020845 AMP-binding, conserved site LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 Pfam PF00501 AMP-binding enzyme 40 471 1.9E-111 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LK04_RS07870 bf765fc9bde93f438edaefcb785993b2 569 Gene3D G3DSA:2.30.38.10 391 462 5.5E-30 T 22-04-2016 LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 PANTHER PTHR11014:SF63 3 377 1.6E-139 T 22-04-2016 LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 PANTHER PTHR11014 3 377 1.6E-139 T 22-04-2016 LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 6 360 1.3E-105 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 Pfam PF01546 Peptidase family M20/M25/M40 65 370 7.7E-31 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 SUPERFAMILY SSF53187 3 189 8.68E-82 T 22-04-2016 LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 SUPERFAMILY SSF53187 290 373 8.68E-82 T 22-04-2016 LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 Pfam PF07687 Peptidase dimerisation domain 177 273 3.2E-8 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 SUPERFAMILY SSF55031 175 288 4.97E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 Gene3D G3DSA:3.40.630.10 290 374 1.1E-94 T 22-04-2016 LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 Gene3D G3DSA:3.40.630.10 4 170 1.1E-94 T 22-04-2016 LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 Gene3D G3DSA:3.30.70.360 173 289 5.1E-38 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS06595 ae76eb13b375d79f4487426bcfbbe79e 379 PIRSF PIRSF005962 1 376 3.3E-119 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LK04_RS05355 c2ab36c4a0edc7bc61a7e5da3deb7421 267 Pfam PF01416 tRNA pseudouridine synthase 150 250 4.7E-27 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05355 c2ab36c4a0edc7bc61a7e5da3deb7421 267 Pfam PF01416 tRNA pseudouridine synthase 14 109 1.6E-8 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05355 c2ab36c4a0edc7bc61a7e5da3deb7421 267 SUPERFAMILY SSF55120 6 261 2.45E-91 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05355 c2ab36c4a0edc7bc61a7e5da3deb7421 267 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 7 249 35.153 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05355 c2ab36c4a0edc7bc61a7e5da3deb7421 267 PANTHER PTHR11142 2 265 3.1E-98 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05355 c2ab36c4a0edc7bc61a7e5da3deb7421 267 Gene3D G3DSA:3.30.70.580 7 110 8.7E-39 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05355 c2ab36c4a0edc7bc61a7e5da3deb7421 267 PIRSF PIRSF001430 6 260 4.7E-76 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05355 c2ab36c4a0edc7bc61a7e5da3deb7421 267 Gene3D G3DSA:3.30.70.660 112 247 5.0E-45 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05355 c2ab36c4a0edc7bc61a7e5da3deb7421 267 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 8 244 5.6E-78 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS05170 43cf7be8d8a7d5c0dc092203f0cb8387 92 Gene3D G3DSA:3.30.920.30 8 76 1.6E-7 T 22-04-2016 LK04_RS05170 43cf7be8d8a7d5c0dc092203f0cb8387 92 SUPERFAMILY SSF54786 9 77 9.42E-5 T 22-04-2016 LK04_RS16945 7d219a87fe65a6102c37108b63a3f29e 393 Gene3D G3DSA:2.120.10.10 32 276 1.2E-72 T 22-04-2016 IPR011040 Sialidases LK04_RS16945 7d219a87fe65a6102c37108b63a3f29e 393 Gene3D G3DSA:2.120.10.10 312 391 1.2E-72 T 22-04-2016 IPR011040 Sialidases LK04_RS16945 7d219a87fe65a6102c37108b63a3f29e 393 PANTHER PTHR33307 33 287 1.7E-81 T 22-04-2016 LK04_RS16945 7d219a87fe65a6102c37108b63a3f29e 393 PANTHER PTHR33307 338 387 1.7E-81 T 22-04-2016 LK04_RS16945 7d219a87fe65a6102c37108b63a3f29e 393 SUPERFAMILY SSF50939 310 392 1.57E-59 T 22-04-2016 IPR011040 Sialidases LK04_RS16945 7d219a87fe65a6102c37108b63a3f29e 393 SUPERFAMILY SSF50939 33 272 1.57E-59 T 22-04-2016 IPR011040 Sialidases LK04_RS16945 7d219a87fe65a6102c37108b63a3f29e 393 Pfam PF13088 BNR repeat-like domain 46 372 7.5E-70 T 22-04-2016 IPR011040 Sialidases LK04_RS16945 7d219a87fe65a6102c37108b63a3f29e 393 PANTHER PTHR33307:SF3 33 287 1.7E-81 T 22-04-2016 LK04_RS16945 7d219a87fe65a6102c37108b63a3f29e 393 PANTHER PTHR33307:SF3 338 387 1.7E-81 T 22-04-2016 LK04_RS15205 a090f7dbd546eb54a33017c933bb91bd 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 9.7E-60 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS15205 a090f7dbd546eb54a33017c933bb91bd 317 SUPERFAMILY SSF51735 100 282 7.71E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15205 a090f7dbd546eb54a33017c933bb91bd 317 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 221 237 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LK04_RS15205 a090f7dbd546eb54a33017c933bb91bd 317 Gene3D G3DSA:3.40.50.720 1 109 1.2E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15205 a090f7dbd546eb54a33017c933bb91bd 317 SUPERFAMILY SSF52283 3 133 3.02E-29 T 22-04-2016 LK04_RS15205 a090f7dbd546eb54a33017c933bb91bd 317 Gene3D G3DSA:3.40.50.720 110 283 1.3E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15205 a090f7dbd546eb54a33017c933bb91bd 317 PANTHER PTHR10996 13 312 8.3E-105 T 22-04-2016 LK04_RS15205 a090f7dbd546eb54a33017c933bb91bd 317 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 171 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LK04_RS15205 a090f7dbd546eb54a33017c933bb91bd 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 16 314 1.8E-25 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LK04_RS18920 d90a36afead3e803cb4138032c83b467 186 SUPERFAMILY SSF48150 1 184 5.76E-80 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LK04_RS18920 d90a36afead3e803cb4138032c83b467 186 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 181 2.4E-80 T 22-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 LK04_RS18920 d90a36afead3e803cb4138032c83b467 186 Gene3D G3DSA:1.10.340.30 1 182 1.1E-83 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LK04_RS18920 d90a36afead3e803cb4138032c83b467 186 PANTHER PTHR30037:SF4 1 184 2.8E-107 T 22-04-2016 LK04_RS18920 d90a36afead3e803cb4138032c83b467 186 PANTHER PTHR30037 1 184 2.8E-107 T 22-04-2016 LK04_RS18920 d90a36afead3e803cb4138032c83b467 186 Pfam PF03352 Methyladenine glycosylase 6 182 4.3E-78 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 LK04_RS06790 b17842b570b223ed09c4ef502bb6cab4 470 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 434 1.7E-70 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS06790 b17842b570b223ed09c4ef502bb6cab4 470 Pfam PF01554 MatE 260 421 4.3E-23 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS06790 b17842b570b223ed09c4ef502bb6cab4 470 Pfam PF01554 MatE 30 190 4.5E-33 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS06790 b17842b570b223ed09c4ef502bb6cab4 470 PANTHER PTHR11206:SF95 22 457 3.6E-95 T 22-04-2016 LK04_RS06790 b17842b570b223ed09c4ef502bb6cab4 470 PIRSF PIRSF006603 12 467 6.5E-74 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS06790 b17842b570b223ed09c4ef502bb6cab4 470 PANTHER PTHR11206 22 457 3.6E-95 T 22-04-2016 LK04_RS01505 100219dfb7f2fa579713f5214fb4c5d0 87 SUPERFAMILY SSF47413 3 71 3.82E-29 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS01505 100219dfb7f2fa579713f5214fb4c5d0 87 Gene3D G3DSA:1.10.260.40 4 72 5.5E-39 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS01505 100219dfb7f2fa579713f5214fb4c5d0 87 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 80 4.7E-37 T 22-04-2016 LK04_RS06495 d2cbf83c7563af1e46cc59f5de012413 434 Pfam PF00296 Luciferase-like monooxygenase 28 379 9.7E-55 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS06495 d2cbf83c7563af1e46cc59f5de012413 434 SUPERFAMILY SSF51679 23 427 9.42E-93 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS06495 d2cbf83c7563af1e46cc59f5de012413 434 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 31 422 2.5E-104 T 22-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LK04_RS06495 d2cbf83c7563af1e46cc59f5de012413 434 PANTHER PTHR30011 36 427 5.1E-81 T 22-04-2016 LK04_RS06495 d2cbf83c7563af1e46cc59f5de012413 434 PANTHER PTHR30011:SF18 36 427 5.1E-81 T 22-04-2016 LK04_RS06495 d2cbf83c7563af1e46cc59f5de012413 434 PIRSF PIRSF000337 11 432 3.2E-105 T 22-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LK04_RS06495 d2cbf83c7563af1e46cc59f5de012413 434 Gene3D G3DSA:3.20.20.30 23 298 3.2E-96 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS06495 d2cbf83c7563af1e46cc59f5de012413 434 Gene3D G3DSA:3.20.20.30 342 427 3.2E-96 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS07750 d18eafabf65071eee501e64cd505f97e 228 Gene3D G3DSA:1.10.1710.10 4 118 2.6E-35 T 22-04-2016 IPR016103 ProQ/FinO domain LK04_RS07750 d18eafabf65071eee501e64cd505f97e 228 SMART SM00945 5 119 8.4E-59 T 22-04-2016 IPR016103 ProQ/FinO domain LK04_RS07750 d18eafabf65071eee501e64cd505f97e 228 SUPERFAMILY SSF48657 5 119 1.96E-38 T 22-04-2016 IPR016103 ProQ/FinO domain LK04_RS07750 d18eafabf65071eee501e64cd505f97e 228 PANTHER PTHR38106 1 228 6.8E-84 T 22-04-2016 LK04_RS07750 d18eafabf65071eee501e64cd505f97e 228 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 228 29.709 T 22-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 LK04_RS07750 d18eafabf65071eee501e64cd505f97e 228 PANTHER PTHR38106:SF1 1 228 6.8E-84 T 22-04-2016 LK04_RS07750 d18eafabf65071eee501e64cd505f97e 228 Pfam PF04352 ProQ/FINO family 8 115 2.8E-42 T 22-04-2016 IPR016103 ProQ/FinO domain LK04_RS01630 5b18be0967648cd4d6ed01baf46d2bfb 324 PIRSF PIRSF015753 5 324 1.1E-129 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 LK04_RS01630 5b18be0967648cd4d6ed01baf46d2bfb 324 Gene3D G3DSA:1.20.1050.10 179 289 1.7E-25 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS01630 5b18be0967648cd4d6ed01baf46d2bfb 324 PANTHER PTHR32419:SF6 1 323 8.0E-171 T 22-04-2016 LK04_RS01630 5b18be0967648cd4d6ed01baf46d2bfb 324 SUPERFAMILY SSF52833 126 162 3.21E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS01630 5b18be0967648cd4d6ed01baf46d2bfb 324 SUPERFAMILY SSF52833 42 99 3.21E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS01630 5b18be0967648cd4d6ed01baf46d2bfb 324 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 259 6.1E-11 T 22-04-2016 LK04_RS01630 5b18be0967648cd4d6ed01baf46d2bfb 324 Gene3D G3DSA:3.40.30.10 38 178 4.2E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS01630 5b18be0967648cd4d6ed01baf46d2bfb 324 PANTHER PTHR32419 1 323 8.0E-171 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 LK04_RS01630 5b18be0967648cd4d6ed01baf46d2bfb 324 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 2.7E-23 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS01630 5b18be0967648cd4d6ed01baf46d2bfb 324 SUPERFAMILY SSF47616 176 323 4.46E-34 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS16005 50c140ba59608262bf88237f3b533528 94 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 22 92 6.0E-8 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 LK04_RS16005 50c140ba59608262bf88237f3b533528 94 Pfam PF07256 Protein of unknown function (DUF1435) 17 91 2.2E-35 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 LK04_RS09695 24d26565ab7542913f7e44d244bc7d69 308 Gene3D G3DSA:3.50.14.10 7 173 1.4E-83 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LK04_RS09695 24d26565ab7542913f7e44d244bc7d69 308 Gene3D G3DSA:3.50.14.10 236 279 1.4E-83 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LK04_RS09695 24d26565ab7542913f7e44d244bc7d69 308 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 11 306 2.2E-130 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LK04_RS09695 24d26565ab7542913f7e44d244bc7d69 308 SUPERFAMILY SSF56596 6 304 6.28E-101 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LK04_RS09695 24d26565ab7542913f7e44d244bc7d69 308 Gene3D G3DSA:3.30.54.10 174 235 3.3E-32 T 22-04-2016 LK04_RS09695 24d26565ab7542913f7e44d244bc7d69 308 Gene3D G3DSA:3.30.54.10 293 306 3.3E-32 T 22-04-2016 LK04_RS09695 24d26565ab7542913f7e44d244bc7d69 308 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 10 304 8.9E-130 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LK04_RS09695 24d26565ab7542913f7e44d244bc7d69 308 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 307 44.268 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LK04_RS07905 46daa24aa8b2ea57287c2e6569c69695 148 PANTHER PTHR37421 1 148 1.8E-76 T 22-04-2016 LK04_RS07905 46daa24aa8b2ea57287c2e6569c69695 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 40.732 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 LK04_RS07905 46daa24aa8b2ea57287c2e6569c69695 148 PANTHER PTHR37421:SF1 1 148 1.8E-76 T 22-04-2016 LK04_RS07905 46daa24aa8b2ea57287c2e6569c69695 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 2.2E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein LK04_RS07905 46daa24aa8b2ea57287c2e6569c69695 148 PIRSF PIRSF006173 1 145 4.8E-65 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 LK04_RS08110 cc578f45a461e0a924fa47b35380fbe7 306 PANTHER PTHR30465 1 306 9.2E-158 T 22-04-2016 LK04_RS08110 cc578f45a461e0a924fa47b35380fbe7 306 SUPERFAMILY SSF161098 90 291 3.53E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08110 cc578f45a461e0a924fa47b35380fbe7 306 Gene3D G3DSA:1.10.3720.10 89 302 4.4E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08110 cc578f45a461e0a924fa47b35380fbe7 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 2.0E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08110 cc578f45a461e0a924fa47b35380fbe7 306 PANTHER PTHR30465:SF74 1 306 9.2E-158 T 22-04-2016 LK04_RS13050 22328a2eaf4afb988f059d6ff116bdcf 134 Gene3D G3DSA:3.10.129.10 4 133 3.3E-46 T 22-04-2016 IPR029069 HotDog domain LK04_RS13050 22328a2eaf4afb988f059d6ff116bdcf 134 PANTHER PTHR31793 1 134 1.1E-50 T 22-04-2016 LK04_RS13050 22328a2eaf4afb988f059d6ff116bdcf 134 Pfam PF03061 Thioesterase superfamily 20 103 3.2E-18 T 22-04-2016 IPR006683 Thioesterase domain LK04_RS13050 22328a2eaf4afb988f059d6ff116bdcf 134 PIRSF PIRSF003230 1 134 3.4E-48 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LK04_RS13050 22328a2eaf4afb988f059d6ff116bdcf 134 SUPERFAMILY SSF54637 4 133 2.18E-38 T 22-04-2016 IPR029069 HotDog domain LK04_RS13050 22328a2eaf4afb988f059d6ff116bdcf 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 1.0E-43 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LK04_RS13050 22328a2eaf4afb988f059d6ff116bdcf 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 5.4E-50 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- LK04_RS13050 22328a2eaf4afb988f059d6ff116bdcf 134 PANTHER PTHR31793:SF9 1 134 1.1E-50 T 22-04-2016 LK04_RS13050 22328a2eaf4afb988f059d6ff116bdcf 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 22-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 PANTHER PTHR34156 2 317 3.9E-187 T 22-04-2016 LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 SUPERFAMILY SSF159871 3 95 1.28E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 Gene3D G3DSA:3.30.1660.10 110 176 5.0E-27 T 22-04-2016 IPR025543 Dodecin-like LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 Gene3D G3DSA:3.30.1660.10 24 91 2.5E-26 T 22-04-2016 IPR025543 Dodecin-like LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 Gene3D G3DSA:3.30.1660.10 252 318 9.6E-25 T 22-04-2016 IPR025543 Dodecin-like LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 SUPERFAMILY SSF159871 246 318 1.44E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 PANTHER PTHR34156:SF2 2 317 3.9E-187 T 22-04-2016 LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 SUPERFAMILY SSF159871 108 179 2.09E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 Pfam PF07338 Protein of unknown function (DUF1471) 262 318 1.4E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 Pfam PF07338 Protein of unknown function (DUF1471) 34 91 4.5E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS08545 4532c08d86d79f4ef7e595d95d44b1d9 318 Pfam PF07338 Protein of unknown function (DUF1471) 120 176 5.5E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS04980 3efd57ef4ccffbb3cb2f9075c8aa2fd2 272 Gene3D G3DSA:3.90.1530.10 25 88 2.0E-6 T 22-04-2016 LK04_RS04980 3efd57ef4ccffbb3cb2f9075c8aa2fd2 272 SUPERFAMILY SSF109709 121 195 6.41E-13 T 22-04-2016 LK04_RS04980 3efd57ef4ccffbb3cb2f9075c8aa2fd2 272 SUPERFAMILY SSF110849 15 115 3.84E-7 T 22-04-2016 IPR003115 ParB/Sulfiredoxin LK04_RS06220 9c2b9aaf6ac1e12049cecbe8782db6c2 356 Pfam PF00155 Aminotransferase class I and II 43 348 1.1E-59 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS06220 9c2b9aaf6ac1e12049cecbe8782db6c2 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 352 55.303 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 LK04_RS06220 9c2b9aaf6ac1e12049cecbe8782db6c2 356 PANTHER PTHR11751 5 355 1.3E-97 T 22-04-2016 LK04_RS06220 9c2b9aaf6ac1e12049cecbe8782db6c2 356 Gene3D G3DSA:3.40.640.10 47 251 5.5E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS06220 9c2b9aaf6ac1e12049cecbe8782db6c2 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 350 2.7E-119 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 LK04_RS06220 9c2b9aaf6ac1e12049cecbe8782db6c2 356 Gene3D G3DSA:3.90.1150.10 252 351 9.1E-26 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS06220 9c2b9aaf6ac1e12049cecbe8782db6c2 356 SUPERFAMILY SSF53383 5 350 2.39E-80 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS06220 9c2b9aaf6ac1e12049cecbe8782db6c2 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 LK04_RS06220 9c2b9aaf6ac1e12049cecbe8782db6c2 356 PANTHER PTHR11751:SF398 5 355 1.3E-97 T 22-04-2016 LK04_RS04405 d53337ed87b1233fd17c4860f72a2ef9 355 PANTHER PTHR21716:SF19 7 352 2.5E-149 T 22-04-2016 LK04_RS04405 d53337ed87b1233fd17c4860f72a2ef9 355 PANTHER PTHR21716 7 352 2.5E-149 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LK04_RS04405 d53337ed87b1233fd17c4860f72a2ef9 355 Pfam PF01594 Domain of unknown function DUF20 20 345 1.4E-76 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 Gene3D G3DSA:3.40.50.970 327 533 7.0E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 Gene3D G3DSA:3.40.50.920 538 663 1.9E-50 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 SUPERFAMILY SSF52922 533 663 4.45E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 SUPERFAMILY SSF52518 333 525 8.66E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 SMART SM00861 355 525 1.3E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.5E-44 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 PANTHER PTHR11624:SF85 334 663 0.0 T 22-04-2016 LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 PANTHER PTHR11624:SF85 1 310 0.0 T 22-04-2016 LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 334 4.8E-167 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 PANTHER PTHR11624 334 663 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 PANTHER PTHR11624 1 310 0.0 T 22-04-2016 IPR033247 Transketolase family LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 4.3E-19 T 22-04-2016 IPR033248 Transketolase, C-terminal domain LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 SUPERFAMILY SSF52518 5 329 4.29E-119 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 LK04_RS09125 1d898322771e3b6ad7dcb14d31c66237 663 Gene3D G3DSA:3.40.50.970 4 321 9.7E-132 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 SUPERFAMILY SSF53335 100 568 5.11E-141 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 SUPERFAMILY SSF53335 10 49 5.11E-141 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 PANTHER PTHR30408 199 548 6.7E-183 T 22-04-2016 LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 331 343 8.770102E-20 T 22-04-2016 LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 249 263 8.770102E-20 T 22-04-2016 LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 365 389 8.770102E-20 T 22-04-2016 LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 226 242 8.770102E-20 T 22-04-2016 LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 Gene3D G3DSA:3.40.50.150 228 466 1.9E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 Pfam PF12161 HsdM N-terminal domain 12 183 4.0E-20 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 Pfam PF02384 N-6 DNA Methylase 202 528 2.1E-121 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 LK04_RS01835 a139f3fe2106b19f13a299e8d0b0a721 569 PANTHER PTHR30408:SF8 199 548 6.7E-183 T 22-04-2016 LK04_RS07115 c20f4f772580c94096d3cfa639c6e4a8 426 PANTHER PTHR30521:SF4 47 426 1.8E-180 T 22-04-2016 LK04_RS07115 c20f4f772580c94096d3cfa639c6e4a8 426 Pfam PF04261 Dyp-type peroxidase family 64 412 3.0E-113 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- LK04_RS07115 c20f4f772580c94096d3cfa639c6e4a8 426 SUPERFAMILY SSF54909 57 419 1.04E-96 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS07115 c20f4f772580c94096d3cfa639c6e4a8 426 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 64 412 9.0E-100 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- LK04_RS07115 c20f4f772580c94096d3cfa639c6e4a8 426 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 4 425 9.5E-174 T 22-04-2016 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 KEGG: 00480+1.11.1.- LK04_RS07115 c20f4f772580c94096d3cfa639c6e4a8 426 PANTHER PTHR30521 47 426 1.8E-180 T 22-04-2016 LK04_RS10165 0ab4ee5dfac0f07cefe5a8817b9d087d 302 PANTHER PTHR30537:SF5 1 285 2.0E-91 T 22-04-2016 LK04_RS10165 0ab4ee5dfac0f07cefe5a8817b9d087d 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.5E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS10165 0ab4ee5dfac0f07cefe5a8817b9d087d 302 SUPERFAMILY SSF53850 86 288 7.06E-44 T 22-04-2016 LK04_RS10165 0ab4ee5dfac0f07cefe5a8817b9d087d 302 SUPERFAMILY SSF46785 4 109 2.13E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10165 0ab4ee5dfac0f07cefe5a8817b9d087d 302 Gene3D G3DSA:1.10.10.10 3 85 2.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10165 0ab4ee5dfac0f07cefe5a8817b9d087d 302 Pfam PF03466 LysR substrate binding domain 86 285 1.2E-40 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS10165 0ab4ee5dfac0f07cefe5a8817b9d087d 302 Gene3D G3DSA:3.40.190.10 176 253 4.0E-5 T 22-04-2016 LK04_RS10165 0ab4ee5dfac0f07cefe5a8817b9d087d 302 PANTHER PTHR30537 1 285 2.0E-91 T 22-04-2016 LK04_RS10165 0ab4ee5dfac0f07cefe5a8817b9d087d 302 Gene3D G3DSA:3.40.190.10 90 175 1.8E-24 T 22-04-2016 LK04_RS10885 a4a7f5659043be841836c3769ea5e779 178 SUPERFAMILY SSF55068 3 168 2.09E-69 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LK04_RS10885 a4a7f5659043be841836c3769ea5e779 178 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 149 1.7E-55 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LK04_RS10885 a4a7f5659043be841836c3769ea5e779 178 PANTHER PTHR10173:SF34 1 157 2.0E-72 T 22-04-2016 LK04_RS10885 a4a7f5659043be841836c3769ea5e779 178 Gene3D G3DSA:3.30.1060.10 3 150 1.2E-66 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LK04_RS10885 a4a7f5659043be841836c3769ea5e779 178 Pfam PF01625 Peptide methionine sulfoxide reductase 6 156 9.0E-61 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LK04_RS10885 a4a7f5659043be841836c3769ea5e779 178 PANTHER PTHR10173 1 157 2.0E-72 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 LK04_RS10885 a4a7f5659043be841836c3769ea5e779 178 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 160 34.18 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 89 102 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 Gene3D G3DSA:3.30.540.10 9 160 7.1E-46 T 22-04-2016 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 PANTHER PTHR20854 4 231 2.7E-53 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 214 238 2.7E-32 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 138 161 2.7E-32 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 183 204 2.7E-32 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 47 67 2.7E-32 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 69 85 2.7E-32 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 2.7E-32 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 Gene3D G3DSA:3.40.190.80 161 265 1.9E-15 T 22-04-2016 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 PANTHER PTHR20854:SF4 4 231 2.7E-53 T 22-04-2016 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 Pfam PF00459 Inositol monophosphatase family 10 246 8.1E-50 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LK04_RS14160 5dc3e983838523df11a62c39d38e88bd 269 SUPERFAMILY SSF56655 9 265 7.72E-63 T 22-04-2016 LK04_RS08150 3a82f3fdddefa8efb935facb388c1aab 138 SUPERFAMILY SSF54637 7 132 5.45E-40 T 22-04-2016 IPR029069 HotDog domain LK04_RS08150 3a82f3fdddefa8efb935facb388c1aab 138 PANTHER PTHR11049:SF5 1 135 2.6E-73 T 22-04-2016 LK04_RS08150 3a82f3fdddefa8efb935facb388c1aab 138 PANTHER PTHR11049 1 135 2.6E-73 T 22-04-2016 LK04_RS08150 3a82f3fdddefa8efb935facb388c1aab 138 Pfam PF03061 Thioesterase superfamily 26 98 1.7E-20 T 22-04-2016 IPR006683 Thioesterase domain LK04_RS08150 3a82f3fdddefa8efb935facb388c1aab 138 Gene3D G3DSA:3.10.129.10 4 131 7.5E-43 T 22-04-2016 IPR029069 HotDog domain LK04_RS05270 c2f3c8d9315308723d732850d8b1a8d6 182 Pfam PF01713 Smr domain 97 171 3.2E-17 T 22-04-2016 IPR002625 Smr domain LK04_RS05270 c2f3c8d9315308723d732850d8b1a8d6 182 PANTHER PTHR35562:SF1 1 182 6.1E-112 T 22-04-2016 LK04_RS05270 c2f3c8d9315308723d732850d8b1a8d6 182 PANTHER PTHR35562 1 182 6.1E-112 T 22-04-2016 LK04_RS05270 c2f3c8d9315308723d732850d8b1a8d6 182 SUPERFAMILY SSF160443 95 149 3.79E-9 T 22-04-2016 IPR002625 Smr domain LK04_RS05270 c2f3c8d9315308723d732850d8b1a8d6 182 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 41.394 T 22-04-2016 IPR022990 Uncharacterised protein family UPF0115 LK04_RS05270 c2f3c8d9315308723d732850d8b1a8d6 182 SMART SM00463 94 172 1.6E-21 T 22-04-2016 IPR002625 Smr domain LK04_RS08470 cbcddbcef4f5c3deb432e8b63b0ec35b 218 PANTHER PTHR33778 1 143 4.1E-60 T 22-04-2016 LK04_RS08470 cbcddbcef4f5c3deb432e8b63b0ec35b 218 PRINTS PR01837 MgtC/SapB protein signature 31 49 2.3E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LK04_RS08470 cbcddbcef4f5c3deb432e8b63b0ec35b 218 PRINTS PR01837 MgtC/SapB protein signature 12 31 2.3E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LK04_RS08470 cbcddbcef4f5c3deb432e8b63b0ec35b 218 PRINTS PR01837 MgtC/SapB protein signature 92 116 2.3E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LK04_RS08470 cbcddbcef4f5c3deb432e8b63b0ec35b 218 PRINTS PR01837 MgtC/SapB protein signature 65 87 2.3E-48 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LK04_RS08470 cbcddbcef4f5c3deb432e8b63b0ec35b 218 Pfam PF02308 MgtC family 9 138 4.7E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LK04_RS04200 efa25666f6625c45ebe45d486a6801da 373 SUPERFAMILY SSF56014 265 353 3.55E-10 T 22-04-2016 LK04_RS04200 efa25666f6625c45ebe45d486a6801da 373 Pfam PF04551 GcpE protein 14 354 8.2E-131 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 LK04_RS04200 efa25666f6625c45ebe45d486a6801da 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 1.5E-123 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 LK04_RS04200 efa25666f6625c45ebe45d486a6801da 373 PIRSF PIRSF004640 1 364 4.8E-146 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 LK04_RS04200 efa25666f6625c45ebe45d486a6801da 373 Gene3D G3DSA:3.20.20.70 31 132 5.0E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS04200 efa25666f6625c45ebe45d486a6801da 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 34.327 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 LK04_RS04200 efa25666f6625c45ebe45d486a6801da 373 PANTHER PTHR30454 1 372 1.8E-223 T 22-04-2016 LK04_RS04200 efa25666f6625c45ebe45d486a6801da 373 SUPERFAMILY SSF51604 23 138 8.83E-10 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS11410 5ec447a4379b65d83d87032936df3b5f 102 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 94 2.1E-18 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 LK04_RS11410 5ec447a4379b65d83d87032936df3b5f 102 SUPERFAMILY SSF101498 4 93 3.01E-13 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 LK04_RS11410 5ec447a4379b65d83d87032936df3b5f 102 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 92 6.1E-10 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal LK04_RS00210 450279d8125fc571cc9e178080eead1f 190 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 2 187 6.7E-79 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LK04_RS00210 450279d8125fc571cc9e178080eead1f 190 Pfam PF02669 K+-transporting ATPase, c chain 5 186 4.7E-71 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LK04_RS00210 450279d8125fc571cc9e178080eead1f 190 PIRSF PIRSF001296 1 190 1.9E-74 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LK04_RS00210 450279d8125fc571cc9e178080eead1f 190 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 34.013 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LK04_RS00210 450279d8125fc571cc9e178080eead1f 190 PANTHER PTHR30042:SF2 1 190 4.1E-88 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LK04_RS00210 450279d8125fc571cc9e178080eead1f 190 PANTHER PTHR30042 1 190 4.1E-88 T 22-04-2016 LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 Gene3D G3DSA:1.10.10.10 1 86 1.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 PANTHER PTHR30427:SF1 1 293 9.4E-58 T 22-04-2016 LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 PANTHER PTHR30427 1 293 9.4E-58 T 22-04-2016 LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 Gene3D G3DSA:3.40.190.10 93 179 3.5E-13 T 22-04-2016 LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 Pfam PF03466 LysR substrate binding domain 87 287 3.5E-33 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 Gene3D G3DSA:3.40.190.10 180 259 1.1E-9 T 22-04-2016 LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 SUPERFAMILY SSF53850 90 290 2.85E-33 T 22-04-2016 LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 SUPERFAMILY SSF46785 1 110 3.63E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00100 bdd713bae1d2a1eeaf8b88df112fc3ec 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 Pfam PF08482 ATP-dependent helicase C-terminal 677 809 3.2E-52 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 17 820 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 Pfam PF00271 Helicase conserved C-terminal domain 219 340 5.1E-11 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 Gene3D G3DSA:3.40.50.300 16 173 2.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 PIRSF PIRSF005496 12 823 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 SMART SM00487 15 199 8.6E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 SMART SM00490 239 341 1.0E-13 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 SMART SM00847 401 489 2.8E-5 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 Pfam PF04408 Helicase associated domain (HA2) 402 457 3.3E-8 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 Gene3D G3DSA:3.40.50.300 211 353 2.2E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 SUPERFAMILY SSF52540 29 352 1.72E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 Pfam PF00270 DEAD/DEAH box helicase 24 176 1.3E-9 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS15085 0c254e563959cb6f077f9b9c84940c29 823 PANTHER PTHR18934 17 433 1.8E-146 T 22-04-2016 LK04_RS19000 58b6a2e776807ec41d7e715e39e5724e 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 2.0E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19000 58b6a2e776807ec41d7e715e39e5724e 139 PANTHER PTHR13822 1 139 1.6E-50 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19000 58b6a2e776807ec41d7e715e39e5724e 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 5.1E-46 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19000 58b6a2e776807ec41d7e715e39e5724e 139 SUPERFAMILY SSF51344 3 86 7.19E-25 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19000 58b6a2e776807ec41d7e715e39e5724e 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 133 6.4E-14 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain LK04_RS19000 58b6a2e776807ec41d7e715e39e5724e 139 Gene3D G3DSA:2.60.15.10 3 91 3.3E-30 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19000 58b6a2e776807ec41d7e715e39e5724e 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 7.0E-38 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS19000 58b6a2e776807ec41d7e715e39e5724e 139 SUPERFAMILY SSF46604 88 137 1.36E-15 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain LK04_RS19000 58b6a2e776807ec41d7e715e39e5724e 139 Gene3D G3DSA:1.20.5.440 92 134 9.2E-25 T 22-04-2016 LK04_RS19000 58b6a2e776807ec41d7e715e39e5724e 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.498 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 SMART SM00345 18 76 1.9E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 SMART SM00895 86 210 1.5E-13 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 Pfam PF07729 FCD domain 86 209 4.8E-19 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 SUPERFAMILY SSF48008 82 217 1.83E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 PANTHER PTHR11751 16 102 3.4E-24 T 22-04-2016 LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.1E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.1E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 SUPERFAMILY SSF46785 11 103 2.11E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 Gene3D G3DSA:1.20.120.530 80 218 3.5E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.5E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS15880 a4f3840c1ce7d03593b47b4e258e44b1 232 Gene3D G3DSA:1.10.10.10 3 77 2.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03795 14bb6a32f80d333d301d0aeeb157fd2a 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 312 4.2E-54 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LK04_RS03795 14bb6a32f80d333d301d0aeeb157fd2a 331 Gene3D G3DSA:3.40.190.10 264 330 8.0E-56 T 22-04-2016 LK04_RS03795 14bb6a32f80d333d301d0aeeb157fd2a 331 Gene3D G3DSA:3.40.190.10 23 112 8.0E-56 T 22-04-2016 LK04_RS03795 14bb6a32f80d333d301d0aeeb157fd2a 331 SUPERFAMILY SSF53850 24 328 1.92E-93 T 22-04-2016 LK04_RS03795 14bb6a32f80d333d301d0aeeb157fd2a 331 Gene3D G3DSA:3.40.190.100 113 263 1.4E-56 T 22-04-2016 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 SUPERFAMILY SSF52374 1 313 3.84E-100 T 22-04-2016 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 SMART SM00840 341 402 2.5E-29 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 1.8E-194 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 6.2E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 6.2E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 6.2E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 6.2E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 SUPERFAMILY SSF47323 316 460 3.01E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.6E-143 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 Gene3D G3DSA:1.20.120.640 306 392 1.4E-27 T 22-04-2016 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 Gene3D G3DSA:3.40.50.620 20 304 8.0E-111 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.397 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 Pfam PF09190 DALR domain 341 402 6.2E-26 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LK04_RS13665 b9cbe1bdda9b96d80e6ee9cfa05acbf1 461 PANTHER PTHR10890 1 460 4.2E-251 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LK04_RS05360 6cd8772db9e1432ee89bcdda5ac6500f 220 PANTHER PTHR30353:SF0 1 218 6.6E-101 T 22-04-2016 LK04_RS05360 6cd8772db9e1432ee89bcdda5ac6500f 220 Pfam PF09335 SNARE associated Golgi protein 49 177 6.2E-25 T 22-04-2016 IPR032816 SNARE associated Golgi protein LK04_RS05360 6cd8772db9e1432ee89bcdda5ac6500f 220 PANTHER PTHR30353 1 218 6.6E-101 T 22-04-2016 IPR032818 DedA family LK04_RS05225 736e499eb4d9e9c10ab00712825e70be 403 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 112 3.1E-24 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI LK04_RS05225 736e499eb4d9e9c10ab00712825e70be 403 Gene3D G3DSA:1.25.40.10 155 204 8.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS05225 736e499eb4d9e9c10ab00712825e70be 403 Gene3D G3DSA:1.25.40.10 205 284 5.7E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS05225 736e499eb4d9e9c10ab00712825e70be 403 PANTHER PTHR30009:SF10 89 309 6.9E-84 T 22-04-2016 LK04_RS05225 736e499eb4d9e9c10ab00712825e70be 403 SUPERFAMILY SSF48452 160 266 8.65E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS05225 736e499eb4d9e9c10ab00712825e70be 403 PANTHER PTHR30009 89 309 6.9E-84 T 22-04-2016 LK04_RS05225 736e499eb4d9e9c10ab00712825e70be 403 Pfam PF14559 Tetratricopeptide repeat 178 242 1.6E-6 T 22-04-2016 LK04_RS10180 8e875fe8d2f79b881845bc2a7e0d2675 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 286 4.1E-133 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS10180 8e875fe8d2f79b881845bc2a7e0d2675 286 PANTHER PTHR10534:SF0 1 286 2.9E-137 T 22-04-2016 LK04_RS10180 8e875fe8d2f79b881845bc2a7e0d2675 286 Pfam PF08543 Phosphomethylpyrimidine kinase 74 263 1.6E-16 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 LK04_RS10180 8e875fe8d2f79b881845bc2a7e0d2675 286 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 1 286 54.656 T 22-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS10180 8e875fe8d2f79b881845bc2a7e0d2675 286 PANTHER PTHR10534 1 286 2.9E-137 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LK04_RS10180 8e875fe8d2f79b881845bc2a7e0d2675 286 SUPERFAMILY SSF53613 1 281 2.13E-77 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS10180 8e875fe8d2f79b881845bc2a7e0d2675 286 Gene3D G3DSA:3.40.1190.20 1 285 2.1E-90 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS11785 acf1da467d38fd9c67efa9d67ba48fd0 542 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 37 370 3.0E-20 T 22-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 LK04_RS11785 acf1da467d38fd9c67efa9d67ba48fd0 542 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 313 329 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site LK04_RS11785 acf1da467d38fd9c67efa9d67ba48fd0 542 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 38 52 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site LK04_RS11785 acf1da467d38fd9c67efa9d67ba48fd0 542 SUPERFAMILY SSF53254 35 418 4.04E-77 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS11785 acf1da467d38fd9c67efa9d67ba48fd0 542 PANTHER PTHR11567:SF135 33 448 2.7E-168 T 22-04-2016 LK04_RS11785 acf1da467d38fd9c67efa9d67ba48fd0 542 Gene3D G3DSA:3.40.50.1240 283 421 6.0E-79 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS11785 acf1da467d38fd9c67efa9d67ba48fd0 542 Gene3D G3DSA:3.40.50.1240 35 148 6.0E-79 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS11785 acf1da467d38fd9c67efa9d67ba48fd0 542 Gene3D G3DSA:3.40.50.1240 149 281 1.4E-61 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS11785 acf1da467d38fd9c67efa9d67ba48fd0 542 PANTHER PTHR11567 33 448 2.7E-168 T 22-04-2016 LK04_RS11430 9a974a5cfa38da1c9d4b009a3611779b 209 SUPERFAMILY SSF46785 2 84 3.33E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS11430 9a974a5cfa38da1c9d4b009a3611779b 209 Pfam PF04337 Protein of unknown function, DUF480 5 158 6.9E-64 T 22-04-2016 IPR007432 Protein of unknown function DUF480 LK04_RS11430 9a974a5cfa38da1c9d4b009a3611779b 209 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 206 33.57 T 22-04-2016 IPR007432 Protein of unknown function DUF480 LK04_RS11430 9a974a5cfa38da1c9d4b009a3611779b 209 Gene3D G3DSA:1.10.10.10 3 87 3.3E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS11430 9a974a5cfa38da1c9d4b009a3611779b 209 Gene3D G3DSA:1.10.10.10 95 171 3.3E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS11430 9a974a5cfa38da1c9d4b009a3611779b 209 PANTHER PTHR38768:SF1 1 207 3.5E-82 T 22-04-2016 LK04_RS11430 9a974a5cfa38da1c9d4b009a3611779b 209 SUPERFAMILY SSF46785 90 171 5.75E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS11430 9a974a5cfa38da1c9d4b009a3611779b 209 PANTHER PTHR38768 1 207 3.5E-82 T 22-04-2016 LK04_RS08745 81c5b9ff025948408269887bbd1b84fd 308 SUPERFAMILY SSF53850 33 307 6.88E-63 T 22-04-2016 LK04_RS08745 81c5b9ff025948408269887bbd1b84fd 308 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 33 303 1.1E-66 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LK04_RS08745 81c5b9ff025948408269887bbd1b84fd 308 PANTHER PTHR30177 28 308 1.7E-108 T 22-04-2016 LK04_RS08745 81c5b9ff025948408269887bbd1b84fd 308 Gene3D G3DSA:3.40.190.120 134 246 1.7E-34 T 22-04-2016 LK04_RS08745 81c5b9ff025948408269887bbd1b84fd 308 PANTHER PTHR30177:SF9 28 308 1.7E-108 T 22-04-2016 LK04_RS08745 81c5b9ff025948408269887bbd1b84fd 308 Gene3D G3DSA:3.40.190.10 252 308 4.0E-53 T 22-04-2016 LK04_RS08745 81c5b9ff025948408269887bbd1b84fd 308 Gene3D G3DSA:3.40.190.10 31 133 4.0E-53 T 22-04-2016 LK04_RS11880 f95751ffa1d01f5d744f475519c40fea 172 Pfam PF07977 FabA-like domain 29 158 1.9E-54 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LK04_RS11880 f95751ffa1d01f5d744f475519c40fea 172 Gene3D G3DSA:3.10.129.10 2 169 2.9E-61 T 22-04-2016 IPR029069 HotDog domain LK04_RS11880 f95751ffa1d01f5d744f475519c40fea 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.049 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LK04_RS11880 f95751ffa1d01f5d744f475519c40fea 172 SUPERFAMILY SSF54637 3 169 2.44E-56 T 22-04-2016 IPR029069 HotDog domain LK04_RS11880 f95751ffa1d01f5d744f475519c40fea 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.6E-94 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LK04_RS19415 c0f4080b079af142c9a4afa423f11903 377 Pfam PF13439 Glycosyltransferase Family 4 17 183 3.8E-19 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LK04_RS19415 c0f4080b079af142c9a4afa423f11903 377 Gene3D G3DSA:3.40.50.2000 165 344 1.2E-25 T 22-04-2016 LK04_RS19415 c0f4080b079af142c9a4afa423f11903 377 PANTHER PTHR12526 3 375 4.4E-51 T 22-04-2016 LK04_RS19415 c0f4080b079af142c9a4afa423f11903 377 Pfam PF00534 Glycosyl transferases group 1 195 336 1.4E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LK04_RS19415 c0f4080b079af142c9a4afa423f11903 377 SUPERFAMILY SSF53756 5 373 1.08E-66 T 22-04-2016 LK04_RS00185 80d179419b015657067e367a58d83fe5 110 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 84 5.1E-27 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 LK04_RS00185 80d179419b015657067e367a58d83fe5 110 SMART SM00530 14 70 8.8E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS00185 80d179419b015657067e367a58d83fe5 110 Gene3D G3DSA:1.10.260.40 1 87 7.3E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS00185 80d179419b015657067e367a58d83fe5 110 Pfam PF01381 Helix-turn-helix 18 69 1.6E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS00185 80d179419b015657067e367a58d83fe5 110 PANTHER PTHR36924 2 108 4.1E-41 T 22-04-2016 LK04_RS00185 80d179419b015657067e367a58d83fe5 110 PANTHER PTHR36924:SF2 2 108 4.1E-41 T 22-04-2016 LK04_RS00185 80d179419b015657067e367a58d83fe5 110 SUPERFAMILY SSF47413 12 87 4.55E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS09115 1c3c9d39873e20b7119f9b57f3658812 444 PANTHER PTHR11662:SF3 1 437 4.0E-143 T 22-04-2016 LK04_RS09115 1c3c9d39873e20b7119f9b57f3658812 444 Gene3D G3DSA:1.20.1250.20 16 217 3.6E-40 T 22-04-2016 LK04_RS09115 1c3c9d39873e20b7119f9b57f3658812 444 Gene3D G3DSA:1.20.1250.20 239 438 7.1E-15 T 22-04-2016 LK04_RS09115 1c3c9d39873e20b7119f9b57f3658812 444 SUPERFAMILY SSF103473 9 433 3.79E-77 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS09115 1c3c9d39873e20b7119f9b57f3658812 444 Pfam PF07690 Major Facilitator Superfamily 25 392 1.2E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS09115 1c3c9d39873e20b7119f9b57f3658812 444 PANTHER PTHR11662 1 437 4.0E-143 T 22-04-2016 LK04_RS18370 daa9a91cf367dc102c57fccb9070cf88 142 Pfam PF02566 OsmC-like protein 44 138 1.2E-15 T 22-04-2016 IPR003718 OsmC/Ohr family LK04_RS18370 daa9a91cf367dc102c57fccb9070cf88 142 Gene3D G3DSA:3.30.300.20 48 140 1.4E-35 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LK04_RS18370 daa9a91cf367dc102c57fccb9070cf88 142 PANTHER PTHR33797:SF2 1 140 3.4E-68 T 22-04-2016 LK04_RS18370 daa9a91cf367dc102c57fccb9070cf88 142 SUPERFAMILY SSF82784 1 140 5.23E-44 T 22-04-2016 IPR003718 OsmC/Ohr family LK04_RS18370 daa9a91cf367dc102c57fccb9070cf88 142 Gene3D G3DSA:2.20.25.10 1 45 1.8E-23 T 22-04-2016 LK04_RS18370 daa9a91cf367dc102c57fccb9070cf88 142 PANTHER PTHR33797 1 140 3.4E-68 T 22-04-2016 LK04_RS18370 daa9a91cf367dc102c57fccb9070cf88 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 3.9E-54 T 22-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PANTHER PTHR34982:SF1 6 227 2.0E-53 T 22-04-2016 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PRINTS PR01003 Flagellar assembly protein FliH signature 58 80 6.8E-81 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PRINTS PR01003 Flagellar assembly protein FliH signature 161 188 6.8E-81 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PRINTS PR01003 Flagellar assembly protein FliH signature 206 231 6.8E-81 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PRINTS PR01003 Flagellar assembly protein FliH signature 120 137 6.8E-81 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PRINTS PR01003 Flagellar assembly protein FliH signature 189 205 6.8E-81 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 6.8E-81 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PRINTS PR01003 Flagellar assembly protein FliH signature 100 119 6.8E-81 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PRINTS PR01003 Flagellar assembly protein FliH signature 81 99 6.8E-81 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PRINTS PR01003 Flagellar assembly protein FliH signature 138 160 6.8E-81 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 Pfam PF02108 Flagellar assembly protein FliH 100 224 2.1E-40 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE LK04_RS06945 8dd1ce87813859edda351648990fe60b 233 PANTHER PTHR34982 6 227 2.0E-53 T 22-04-2016 LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 Gene3D G3DSA:3.40.50.720 1 146 1.8E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 9.3E-135 T 22-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.905 T 22-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 Gene3D G3DSA:3.90.110.10 148 311 2.6E-62 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 310 6.3E-50 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 PANTHER PTHR11540 1 311 5.4E-223 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 7.1E-45 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 PANTHER PTHR11540:SF22 1 311 5.4E-223 T 22-04-2016 LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 SUPERFAMILY SSF51735 1 145 8.89E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 SUPERFAMILY SSF56327 147 310 2.32E-41 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LK04_RS01270 04020eb8ce0cb977367fc018f7ebd6bc 311 PIRSF PIRSF000102 1 309 1.7E-57 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LK04_RS10005 f5dc03eba89ee610fe1423a81c66c06d 294 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 22 205 9.9E-57 T 22-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 LK04_RS10005 f5dc03eba89ee610fe1423a81c66c06d 294 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 21 199 1.0E-52 T 22-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 LK04_RS10005 f5dc03eba89ee610fe1423a81c66c06d 294 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 87 93 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS10560 96626dc9abfa2cd2f6aa1b42b912be21 442 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 441 8.7E-236 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 LK04_RS10560 96626dc9abfa2cd2f6aa1b42b912be21 442 PANTHER PTHR30420:SF2 2 442 5.7E-301 T 22-04-2016 LK04_RS10560 96626dc9abfa2cd2f6aa1b42b912be21 442 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 442 59.173 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 LK04_RS10560 96626dc9abfa2cd2f6aa1b42b912be21 442 PANTHER PTHR30420 2 442 5.7E-301 T 22-04-2016 LK04_RS10560 96626dc9abfa2cd2f6aa1b42b912be21 442 Pfam PF04996 Succinylarginine dihydrolase 3 441 1.8E-217 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 LK04_RS10560 96626dc9abfa2cd2f6aa1b42b912be21 442 Gene3D G3DSA:3.75.10.20 1 442 2.4E-228 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 LK04_RS10560 96626dc9abfa2cd2f6aa1b42b912be21 442 SUPERFAMILY SSF55909 3 442 1.37E-204 T 22-04-2016 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 Gene3D G3DSA:2.40.50.140 16 154 2.9E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 SUPERFAMILY SSF55681 162 502 2.13E-124 T 22-04-2016 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 503 8.8E-234 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 PANTHER PTHR22594:SF4 1 503 3.5E-288 T 22-04-2016 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 SUPERFAMILY SSF50249 13 155 1.52E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 2.8E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 506 45.583 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 PANTHER PTHR22594 1 503 3.5E-288 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.1E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.1E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.1E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.1E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.1E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.3E-83 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 Gene3D G3DSA:3.30.930.10 157 500 2.2E-124 T 22-04-2016 LK04_RS03050 60f17f235e1b02470ece42965f0012d6 506 PIRSF PIRSF039101 1 506 1.6E-204 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 LK04_RS08640 9d419b5cef4baa8fa0e9b6daf9bdc189 424 PANTHER PTHR23508 19 417 3.9E-112 T 22-04-2016 LK04_RS08640 9d419b5cef4baa8fa0e9b6daf9bdc189 424 SUPERFAMILY SSF103473 16 421 8.76E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS08640 9d419b5cef4baa8fa0e9b6daf9bdc189 424 Pfam PF07690 Major Facilitator Superfamily 25 287 1.1E-18 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS08640 9d419b5cef4baa8fa0e9b6daf9bdc189 424 Gene3D G3DSA:1.20.1250.20 18 223 9.0E-23 T 22-04-2016 LK04_RS08640 9d419b5cef4baa8fa0e9b6daf9bdc189 424 Gene3D G3DSA:1.20.1250.20 226 418 2.4E-18 T 22-04-2016 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 Gene3D G3DSA:1.10.1660.10 66 145 3.4E-15 T 22-04-2016 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 PANTHER PTHR30204:SF0 4 142 8.7E-72 T 22-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 9.8E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 9.8E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 9.8E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 PANTHER PTHR30204 4 142 8.7E-72 T 22-04-2016 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 Pfam PF00376 MerR family regulatory protein 13 49 5.4E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 SUPERFAMILY SSF46955 12 134 9.89E-27 T 22-04-2016 IPR009061 Putative DNA-binding domain LK04_RS17220 d534966f32166c1b8a110359655c137d 158 Pfam PF09278 MerR, DNA binding 54 119 1.4E-14 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding LK04_RS17220 d534966f32166c1b8a110359655c137d 158 SMART SM00422 12 80 3.2E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 Gene3D G3DSA:1.10.1660.10 11 65 9.7E-18 T 22-04-2016 LK04_RS17220 d534966f32166c1b8a110359655c137d 158 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 150 2.9E-66 T 22-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 LK04_RS06110 f7713da0df077ae7b546db8e5648a609 297 PANTHER PTHR22572:SF118 5 280 9.0E-180 T 22-04-2016 LK04_RS06110 f7713da0df077ae7b546db8e5648a609 297 Pfam PF00483 Nucleotidyl transferase 5 272 2.7E-24 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LK04_RS06110 f7713da0df077ae7b546db8e5648a609 297 SUPERFAMILY SSF53448 1 284 7.66E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06110 f7713da0df077ae7b546db8e5648a609 297 Gene3D G3DSA:3.90.550.10 3 278 2.4E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06110 f7713da0df077ae7b546db8e5648a609 297 PANTHER PTHR22572 5 280 9.0E-180 T 22-04-2016 LK04_RS06205 92871e2f0b0eb3249d6857ae3a07fe90 245 SUPERFAMILY SSF51366 1 244 1.21E-67 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LK04_RS06205 92871e2f0b0eb3249d6857ae3a07fe90 245 PANTHER PTHR21235 1 244 3.7E-111 T 22-04-2016 LK04_RS06205 92871e2f0b0eb3249d6857ae3a07fe90 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 237 8.8E-78 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 LK04_RS06205 92871e2f0b0eb3249d6857ae3a07fe90 245 PANTHER PTHR21235:SF15 1 244 3.7E-111 T 22-04-2016 LK04_RS06205 92871e2f0b0eb3249d6857ae3a07fe90 245 Pfam PF00977 Histidine biosynthesis protein 1 234 7.7E-76 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 LK04_RS06205 92871e2f0b0eb3249d6857ae3a07fe90 245 Gene3D G3DSA:3.20.20.70 1 243 3.3E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS06205 92871e2f0b0eb3249d6857ae3a07fe90 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.819 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 LK04_RS10170 a051fd7674f331ec0fc10e6a51129bbe 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 190 8.9E-15 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal LK04_RS10170 a051fd7674f331ec0fc10e6a51129bbe 202 SUPERFAMILY SSF47616 84 200 2.92E-29 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS10170 a051fd7674f331ec0fc10e6a51129bbe 202 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 75 1.9E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS10170 a051fd7674f331ec0fc10e6a51129bbe 202 Gene3D G3DSA:3.40.30.10 2 90 6.8E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS10170 a051fd7674f331ec0fc10e6a51129bbe 202 PANTHER PTHR11260 1 196 1.2E-104 T 22-04-2016 LK04_RS10170 a051fd7674f331ec0fc10e6a51129bbe 202 SUPERFAMILY SSF52833 2 79 1.28E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS10170 a051fd7674f331ec0fc10e6a51129bbe 202 Gene3D G3DSA:1.20.1050.10 91 189 1.2E-39 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS10170 a051fd7674f331ec0fc10e6a51129bbe 202 PANTHER PTHR11260:SF154 1 196 1.2E-104 T 22-04-2016 LK04_RS03750 32d5f5995bf2a1b58b623fe7069a50d6 451 SMART SM00155 352 379 0.0031 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LK04_RS03750 32d5f5995bf2a1b58b623fe7069a50d6 451 SMART SM00155 133 159 0.029 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LK04_RS03750 32d5f5995bf2a1b58b623fe7069a50d6 451 SUPERFAMILY SSF56024 254 393 1.29E-18 T 22-04-2016 LK04_RS03750 32d5f5995bf2a1b58b623fe7069a50d6 451 SUPERFAMILY SSF56024 9 201 1.85E-26 T 22-04-2016 LK04_RS03750 32d5f5995bf2a1b58b623fe7069a50d6 451 PANTHER PTHR12586 1 450 6.0E-262 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LK04_RS03750 32d5f5995bf2a1b58b623fe7069a50d6 451 PIRSF PIRSF000850 1 451 3.1E-246 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LK04_RS03750 32d5f5995bf2a1b58b623fe7069a50d6 451 Gene3D G3DSA:3.30.870.10 26 197 4.0E-15 T 22-04-2016 LK04_RS03750 32d5f5995bf2a1b58b623fe7069a50d6 451 Gene3D G3DSA:3.30.870.10 254 404 1.5E-15 T 22-04-2016 LK04_RS03750 32d5f5995bf2a1b58b623fe7069a50d6 451 Pfam PF13091 PLD-like domain 257 404 3.0E-23 T 22-04-2016 IPR025202 Phospholipase D-like domain LK04_RS03750 32d5f5995bf2a1b58b623fe7069a50d6 451 PANTHER PTHR12586:SF3 1 450 6.0E-262 T 22-04-2016 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 60.849 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 Gene3D G3DSA:3.30.499.10 334 465 1.6E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 Gene3D G3DSA:3.30.499.10 293 302 1.6E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PRINTS PR00415 Aconitase family signature 398 411 2.2E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PRINTS PR00415 Aconitase family signature 118 131 2.2E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PRINTS PR00415 Aconitase family signature 81 94 2.2E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PRINTS PR00415 Aconitase family signature 208 221 2.2E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PRINTS PR00415 Aconitase family signature 285 299 2.2E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PRINTS PR00415 Aconitase family signature 342 353 2.2E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PRINTS PR00415 Aconitase family signature 107 115 2.2E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PRINTS PR00415 Aconitase family signature 194 207 2.2E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PRINTS PR00415 Aconitase family signature 132 147 2.2E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 Gene3D G3DSA:3.30.499.10 4 157 2.1E-23 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 2 464 5.1E-268 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 SUPERFAMILY SSF53732 3 464 9.81E-169 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 Gene3D G3DSA:3.40.1060.10 165 279 1.6E-40 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 Pfam PF00330 Aconitase family (aconitate hydratase) 7 456 3.7E-156 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PANTHER PTHR11670:SF38 326 466 1.9E-271 T 22-04-2016 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PANTHER PTHR11670:SF38 2 306 1.9E-271 T 22-04-2016 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 ProSitePatterns PS01244 Aconitase family signature 2. 398 411 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PANTHER PTHR11670 326 466 1.9E-271 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15480 562d36bc5a5f13e8017f3798d3113724 468 PANTHER PTHR11670 2 306 1.9E-271 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS16595 a180168773d6c16577610351142f290d 271 PANTHER PTHR24220 10 261 4.1E-184 T 22-04-2016 LK04_RS16595 a180168773d6c16577610351142f290d 271 SUPERFAMILY SSF52540 8 236 4.19E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16595 a180168773d6c16577610351142f290d 271 Pfam PF00005 ABC transporter 25 172 2.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS16595 a180168773d6c16577610351142f290d 271 Gene3D G3DSA:3.40.50.300 5 238 2.4E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16595 a180168773d6c16577610351142f290d 271 SMART SM00382 33 229 5.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS16595 a180168773d6c16577610351142f290d 271 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS16595 a180168773d6c16577610351142f290d 271 PANTHER PTHR24220:SF368 10 261 4.1E-184 T 22-04-2016 LK04_RS16785 ca169d14052a61c15c8863bfa9cec24f 132 PANTHER PTHR33570 6 131 7.8E-51 T 22-04-2016 LK04_RS16785 ca169d14052a61c15c8863bfa9cec24f 132 Gene3D G3DSA:2.60.120.10 12 131 9.6E-36 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS16785 ca169d14052a61c15c8863bfa9cec24f 132 PANTHER PTHR33570:SF5 6 131 7.8E-51 T 22-04-2016 LK04_RS16785 ca169d14052a61c15c8863bfa9cec24f 132 SUPERFAMILY SSF51182 8 130 1.45E-32 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS16785 ca169d14052a61c15c8863bfa9cec24f 132 Pfam PF07883 Cupin domain 42 106 7.7E-11 T 22-04-2016 IPR013096 Cupin 2, conserved barrel LK04_RS13490 eec0601a81bdcb0c66d8a3c8afa83809 640 SUPERFAMILY SSF58104 358 639 2.75E-63 T 22-04-2016 LK04_RS13490 eec0601a81bdcb0c66d8a3c8afa83809 640 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 450 637 4.2E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS13490 eec0601a81bdcb0c66d8a3c8afa83809 640 Pfam PF00672 HAMP domain 319 385 3.6E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS13490 eec0601a81bdcb0c66d8a3c8afa83809 640 SMART SM00283 391 638 3.5E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS13490 eec0601a81bdcb0c66d8a3c8afa83809 640 PANTHER PTHR32089:SF63 310 640 4.7E-106 T 22-04-2016 LK04_RS13490 eec0601a81bdcb0c66d8a3c8afa83809 640 PANTHER PTHR32089 310 640 4.7E-106 T 22-04-2016 LK04_RS13490 eec0601a81bdcb0c66d8a3c8afa83809 640 SMART SM00304 336 390 2.7E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS13490 eec0601a81bdcb0c66d8a3c8afa83809 640 Gene3D G3DSA:1.10.287.950 407 609 6.3E-50 T 22-04-2016 LK04_RS13490 eec0601a81bdcb0c66d8a3c8afa83809 640 Pfam PF02743 Cache domain 43 297 5.8E-19 T 22-04-2016 IPR033479 Double Cache domain 1 LK04_RS13490 eec0601a81bdcb0c66d8a3c8afa83809 640 Gene3D G3DSA:3.30.450.20 164 312 8.2E-15 T 22-04-2016 LK04_RS02115 5ded1a7ee00c71b464f207d570c29d46 140 PANTHER PTHR30558 8 136 2.5E-74 T 22-04-2016 LK04_RS02115 5ded1a7ee00c71b464f207d570c29d46 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 2.0E-30 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 LK04_RS02115 5ded1a7ee00c71b464f207d570c29d46 140 PANTHER PTHR30558:SF9 8 136 2.5E-74 T 22-04-2016 LK04_RS02115 5ded1a7ee00c71b464f207d570c29d46 140 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 1.0E-66 T 22-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 LK04_RS02245 02f78493791596f400608310278e09c1 195 PANTHER PTHR34606:SF3 30 195 4.8E-58 T 22-04-2016 LK04_RS02245 02f78493791596f400608310278e09c1 195 SMART SM00749 132 195 1.2E-12 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LK04_RS02245 02f78493791596f400608310278e09c1 195 SMART SM00749 53 116 2.0E-9 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LK04_RS02245 02f78493791596f400608310278e09c1 195 Pfam PF04972 BON domain 128 194 1.2E-19 T 22-04-2016 IPR007055 BON domain LK04_RS02245 02f78493791596f400608310278e09c1 195 Pfam PF04972 BON domain 48 115 2.2E-20 T 22-04-2016 IPR007055 BON domain LK04_RS02245 02f78493791596f400608310278e09c1 195 PANTHER PTHR34606 30 195 4.8E-58 T 22-04-2016 LK04_RS04110 2e700717bfc7189f159903bc3c793612 417 PIRSF PIRSF000412 1 416 8.4E-174 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LK04_RS04110 2e700717bfc7189f159903bc3c793612 417 SUPERFAMILY SSF53383 8 416 8.94E-184 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS04110 2e700717bfc7189f159903bc3c793612 417 Gene3D G3DSA:3.40.640.10 37 285 4.9E-109 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS04110 2e700717bfc7189f159903bc3c793612 417 Gene3D G3DSA:3.90.1150.10 286 416 1.3E-55 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS04110 2e700717bfc7189f159903bc3c793612 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LK04_RS04110 2e700717bfc7189f159903bc3c793612 417 PANTHER PTHR11680 1 416 0.0 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LK04_RS04110 2e700717bfc7189f159903bc3c793612 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.9E-188 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LK04_RS04110 2e700717bfc7189f159903bc3c793612 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.013 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LK04_RS04110 2e700717bfc7189f159903bc3c793612 417 PANTHER PTHR11680:SF9 1 416 0.0 T 22-04-2016 LK04_RS02500 d6e353b5b7f785e6229dddf99ba026b0 354 Gene3D G3DSA:3.20.20.150 1 353 4.5E-142 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS02500 d6e353b5b7f785e6229dddf99ba026b0 354 PANTHER PTHR30387 1 354 1.5E-121 T 22-04-2016 LK04_RS02500 d6e353b5b7f785e6229dddf99ba026b0 354 SUPERFAMILY SSF51658 1 349 3.32E-84 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS02500 d6e353b5b7f785e6229dddf99ba026b0 354 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 352 7.4E-155 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 LK04_RS02500 d6e353b5b7f785e6229dddf99ba026b0 354 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 154 352 4.7E-65 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 LK04_RS02500 d6e353b5b7f785e6229dddf99ba026b0 354 PANTHER PTHR30387:SF2 1 354 1.5E-121 T 22-04-2016 LK04_RS02500 d6e353b5b7f785e6229dddf99ba026b0 354 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 354 164.158 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 LK04_RS05800 35e9a7900385ce8d706411cc39910219 359 Pfam PF01032 FecCD transport family 40 354 5.9E-86 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS05800 35e9a7900385ce8d706411cc39910219 359 PANTHER PTHR30472 17 359 3.3E-170 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS05800 35e9a7900385ce8d706411cc39910219 359 Gene3D G3DSA:1.10.3470.10 22 356 9.8E-100 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS05800 35e9a7900385ce8d706411cc39910219 359 SUPERFAMILY SSF81345 22 354 1.57E-79 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS05800 35e9a7900385ce8d706411cc39910219 359 PANTHER PTHR30472:SF25 17 359 3.3E-170 T 22-04-2016 LK04_RS00705 527b8b4f9aaa8690cbce19da1a7e87c8 197 Pfam PF02661 Fic/DOC family 58 152 7.6E-16 T 22-04-2016 IPR003812 Fido domain LK04_RS00705 527b8b4f9aaa8690cbce19da1a7e87c8 197 SUPERFAMILY SSF140931 42 194 5.1E-32 T 22-04-2016 IPR003812 Fido domain LK04_RS00705 527b8b4f9aaa8690cbce19da1a7e87c8 197 PANTHER PTHR39560 1 197 3.4E-46 T 22-04-2016 LK04_RS00705 527b8b4f9aaa8690cbce19da1a7e87c8 197 PANTHER PTHR39560:SF1 1 197 3.4E-46 T 22-04-2016 LK04_RS00705 527b8b4f9aaa8690cbce19da1a7e87c8 197 Gene3D G3DSA:1.10.3290.10 12 195 1.6E-50 T 22-04-2016 IPR003812 Fido domain LK04_RS04870 73804965a94d2fc1404d1c66c8090370 299 SUPERFAMILY SSF103481 189 291 4.45E-9 T 22-04-2016 LK04_RS04870 73804965a94d2fc1404d1c66c8090370 299 Pfam PF00892 EamA-like transporter family 151 287 1.5E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS04870 73804965a94d2fc1404d1c66c8090370 299 Pfam PF00892 EamA-like transporter family 3 136 2.2E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS04870 73804965a94d2fc1404d1c66c8090370 299 PANTHER PTHR32322:SF8 1 297 1.7E-50 T 22-04-2016 LK04_RS04870 73804965a94d2fc1404d1c66c8090370 299 SUPERFAMILY SSF103481 37 139 2.22E-14 T 22-04-2016 LK04_RS04870 73804965a94d2fc1404d1c66c8090370 299 PANTHER PTHR32322 1 297 1.7E-50 T 22-04-2016 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 PANTHER PTHR22976:SF1 3 343 3.4E-192 T 22-04-2016 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 TIGRFAM TIGR00433 bioB: biotin synthase 12 308 1.5E-123 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 SMART SM00876 218 310 1.2E-48 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 Gene3D G3DSA:3.20.20.70 3 311 2.3E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 PANTHER PTHR22976 3 343 3.4E-192 T 22-04-2016 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 Hamap MF_01694 Biotin synthase [bioB]. 3 311 41.355 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 Pfam PF04055 Radical SAM superfamily 48 200 2.5E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 218 308 5.4E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 PIRSF PIRSF001619 1 317 1.8E-137 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 SUPERFAMILY SSF102114 3 310 3.27E-92 T 22-04-2016 LK04_RS12890 62b15793f2045652264f0b3671a643bc 343 SMART SM00729 41 253 2.2E-39 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LK04_RS09605 7f8206920e496938027f965e8261f02c 141 Pfam PF12802 MarR family 30 87 5.5E-10 T 22-04-2016 LK04_RS09605 7f8206920e496938027f965e8261f02c 141 PANTHER PTHR39515 6 140 7.8E-28 T 22-04-2016 LK04_RS09605 7f8206920e496938027f965e8261f02c 141 SMART SM00347 24 125 1.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS09605 7f8206920e496938027f965e8261f02c 141 Gene3D G3DSA:1.10.10.10 30 94 2.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09605 7f8206920e496938027f965e8261f02c 141 Gene3D G3DSA:1.10.287.100 96 140 3.0E-17 T 22-04-2016 IPR013028 Transcription factor IIA, alpha subunit, N-terminal GO:0006367 LK04_RS09605 7f8206920e496938027f965e8261f02c 141 SUPERFAMILY SSF46785 5 140 1.37E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09605 7f8206920e496938027f965e8261f02c 141 PANTHER PTHR39515:SF2 6 140 7.8E-28 T 22-04-2016 LK04_RS10555 dd277d55998e80d2eb295c5b76dca71a 329 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 45 322 2.2E-65 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 LK04_RS10555 dd277d55998e80d2eb295c5b76dca71a 329 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 329 142.278 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 LK04_RS10555 dd277d55998e80d2eb295c5b76dca71a 329 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 7.0E-126 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 LK04_RS10555 dd277d55998e80d2eb295c5b76dca71a 329 PIRSF PIRSF017020 1 328 2.5E-116 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 LK04_RS10555 dd277d55998e80d2eb295c5b76dca71a 329 Gene3D G3DSA:3.40.630.10 35 236 4.0E-16 T 22-04-2016 LK04_RS10555 dd277d55998e80d2eb295c5b76dca71a 329 PANTHER PTHR15162 1 324 5.6E-76 T 22-04-2016 LK04_RS10555 dd277d55998e80d2eb295c5b76dca71a 329 SUPERFAMILY SSF53187 1 320 1.95E-84 T 22-04-2016 LK04_RS02565 9ad40f3c4559fd823b43bc3c0eafdee0 147 Pfam PF03928 Haem-degrading 20 141 7.1E-26 T 22-04-2016 IPR005624 Haem-degrading LK04_RS02565 9ad40f3c4559fd823b43bc3c0eafdee0 147 PANTHER PTHR34309:SF4 19 144 1.4E-27 T 22-04-2016 LK04_RS02565 9ad40f3c4559fd823b43bc3c0eafdee0 147 SUPERFAMILY SSF143744 16 144 4.97E-33 T 22-04-2016 LK04_RS02565 9ad40f3c4559fd823b43bc3c0eafdee0 147 PANTHER PTHR34309 19 144 1.4E-27 T 22-04-2016 LK04_RS08400 c4b0115319e27686910dfdffc80ed617 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 9.5E-35 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 LK04_RS08400 c4b0115319e27686910dfdffc80ed617 75 Pfam PF06667 Phage shock protein B 3 74 4.8E-34 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 LK04_RS13245 be6c144171dd9ab88088d2df1cd2e526 250 PANTHER PTHR19288:SF40 3 247 3.3E-163 T 22-04-2016 LK04_RS13245 be6c144171dd9ab88088d2df1cd2e526 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 7.6E-61 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA LK04_RS13245 be6c144171dd9ab88088d2df1cd2e526 250 Gene3D G3DSA:3.40.50.10410 83 173 6.8E-32 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain LK04_RS13245 be6c144171dd9ab88088d2df1cd2e526 250 Pfam PF13242 HAD-hyrolase-like 174 246 3.0E-21 T 22-04-2016 LK04_RS13245 be6c144171dd9ab88088d2df1cd2e526 250 Gene3D G3DSA:3.40.50.1000 174 247 5.6E-41 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13245 be6c144171dd9ab88088d2df1cd2e526 250 Gene3D G3DSA:3.40.50.1000 1 79 5.6E-41 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13245 be6c144171dd9ab88088d2df1cd2e526 250 PANTHER PTHR19288 3 247 3.3E-163 T 22-04-2016 LK04_RS13245 be6c144171dd9ab88088d2df1cd2e526 250 SUPERFAMILY SSF56784 1 247 1.0E-64 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13245 be6c144171dd9ab88088d2df1cd2e526 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.2E-22 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA LK04_RS12585 1ed04b31f9f9977608e26ac667211bc5 319 PANTHER PTHR11358:SF27 1 316 1.1E-184 T 22-04-2016 LK04_RS12585 1ed04b31f9f9977608e26ac667211bc5 319 SUPERFAMILY SSF52768 13 308 9.36E-97 T 22-04-2016 LK04_RS12585 1ed04b31f9f9977608e26ac667211bc5 319 Gene3D G3DSA:3.40.800.10 7 309 1.1E-116 T 22-04-2016 IPR023696 Ureohydrolase domain LK04_RS12585 1ed04b31f9f9977608e26ac667211bc5 319 TIGRFAM TIGR01230 agmatinase: agmatinase 34 307 6.9E-60 T 22-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 LK04_RS12585 1ed04b31f9f9977608e26ac667211bc5 319 Pfam PF00491 Arginase family 35 306 2.9E-82 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LK04_RS12585 1ed04b31f9f9977608e26ac667211bc5 319 ProSitePatterns PS01053 Arginase family signature. 237 258 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 LK04_RS12585 1ed04b31f9f9977608e26ac667211bc5 319 PANTHER PTHR11358 1 316 1.1E-184 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LK04_RS12585 1ed04b31f9f9977608e26ac667211bc5 319 PIRSF PIRSF036979 14 312 1.4E-98 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LK04_RS12585 1ed04b31f9f9977608e26ac667211bc5 319 PRINTS PR00116 Arginase signature 121 136 5.5E-14 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LK04_RS12585 1ed04b31f9f9977608e26ac667211bc5 319 PRINTS PR00116 Arginase signature 234 263 5.5E-14 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 PANTHER PTHR11552:SF139 6 125 1.6E-81 T 22-04-2016 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 PANTHER PTHR11552:SF139 141 584 1.6E-81 T 22-04-2016 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 PANTHER PTHR11552 6 125 1.6E-81 T 22-04-2016 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 PANTHER PTHR11552 141 584 1.6E-81 T 22-04-2016 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 Gene3D G3DSA:3.50.50.60 452 465 9.0E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 Gene3D G3DSA:3.50.50.60 243 349 9.0E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 Gene3D G3DSA:3.50.50.60 510 577 9.0E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 Gene3D G3DSA:3.50.50.60 6 158 9.0E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 SUPERFAMILY SSF51905 6 341 1.3E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 SUPERFAMILY SSF51905 519 580 1.3E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 Pfam PF00732 GMC oxidoreductase 201 343 9.8E-9 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LK04_RS16220 89b9ce790a76da2928f1d1acd356460f 589 Pfam PF05199 GMC oxidoreductase 450 569 1.1E-12 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 SUPERFAMILY SSF52540 262 491 6.45E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 PANTHER PTHR24220:SF308 18 394 2.4E-141 T 22-04-2016 LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 Pfam PF00005 ABC transporter 285 439 1.2E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 Pfam PF00005 ABC transporter 32 181 3.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 Gene3D G3DSA:3.40.50.300 266 491 1.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 Gene3D G3DSA:3.40.50.300 13 239 7.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 PANTHER PTHR24220 18 394 2.4E-141 T 22-04-2016 LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 ProSitePatterns PS00211 ABC transporters family signature. 412 426 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 SMART SM00382 294 488 2.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 SMART SM00382 41 229 1.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08955 cace5563f55412ce939c79cc2ef746e5 512 SUPERFAMILY SSF52540 15 239 2.88E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10855 516daf280d533898e09b5adef73f7414 455 Gene3D G3DSA:1.20.1250.20 5 205 5.4E-47 T 22-04-2016 LK04_RS10855 516daf280d533898e09b5adef73f7414 455 PANTHER PTHR11662:SF18 1 453 3.3E-133 T 22-04-2016 LK04_RS10855 516daf280d533898e09b5adef73f7414 455 PANTHER PTHR11662 1 453 3.3E-133 T 22-04-2016 LK04_RS10855 516daf280d533898e09b5adef73f7414 455 PIRSF PIRSF002808 2 443 1.0E-43 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS10855 516daf280d533898e09b5adef73f7414 455 Pfam PF07690 Major Facilitator Superfamily 16 391 4.8E-57 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS10855 516daf280d533898e09b5adef73f7414 455 Gene3D G3DSA:1.20.1250.20 234 430 6.4E-31 T 22-04-2016 LK04_RS10855 516daf280d533898e09b5adef73f7414 455 SUPERFAMILY SSF103473 4 426 1.44E-80 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS17310 29aaf9ae3dfe4a19a4fad9ce5e962689 88 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 62 3.9E-26 T 22-04-2016 IPR014318 Phage shock protein, PspG LK04_RS17310 29aaf9ae3dfe4a19a4fad9ce5e962689 88 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 63 3.7E-25 T 22-04-2016 IPR014318 Phage shock protein, PspG LK04_RS12510 1cd0ece59628802903800a5134f80b1f 266 Pfam PF00005 ABC transporter 24 183 6.7E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12510 1cd0ece59628802903800a5134f80b1f 266 PANTHER PTHR24220:SF472 10 257 7.8E-137 T 22-04-2016 LK04_RS12510 1cd0ece59628802903800a5134f80b1f 266 PIRSF PIRSF039085 5 259 2.4E-115 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS12510 1cd0ece59628802903800a5134f80b1f 266 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS12510 1cd0ece59628802903800a5134f80b1f 266 PANTHER PTHR24220 10 257 7.8E-137 T 22-04-2016 LK04_RS12510 1cd0ece59628802903800a5134f80b1f 266 Gene3D G3DSA:3.40.50.300 9 255 2.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12510 1cd0ece59628802903800a5134f80b1f 266 SMART SM00382 33 231 2.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12510 1cd0ece59628802903800a5134f80b1f 266 SUPERFAMILY SSF52540 9 252 1.98E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01350 d85c44f7b9ed3c61feb12508848a5028 412 Pfam PF12221 Bacterial membrane protein N terminal 1 58 6.3E-15 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal LK04_RS01350 d85c44f7b9ed3c61feb12508848a5028 412 SMART SM00244 89 249 7.0E-42 T 22-04-2016 IPR001107 Band 7 domain LK04_RS01350 d85c44f7b9ed3c61feb12508848a5028 412 TIGRFAM TIGR01933 hflK: HflK protein 91 350 2.6E-120 T 22-04-2016 IPR010201 HflK GO:0016021 LK04_RS01350 d85c44f7b9ed3c61feb12508848a5028 412 Pfam PF01145 SPFH domain / Band 7 family 93 264 6.3E-30 T 22-04-2016 IPR001107 Band 7 domain LK04_RS01350 d85c44f7b9ed3c61feb12508848a5028 412 PANTHER PTHR10264 13 384 9.8E-188 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS01350 d85c44f7b9ed3c61feb12508848a5028 412 SUPERFAMILY SSF117892 122 255 7.06E-20 T 22-04-2016 IPR001107 Band 7 domain LK04_RS01350 d85c44f7b9ed3c61feb12508848a5028 412 PANTHER PTHR10264:SF51 13 384 9.8E-188 T 22-04-2016 IPR010201 HflK GO:0016021 LK04_RS01350 d85c44f7b9ed3c61feb12508848a5028 412 PRINTS PR00721 Stomatin signature 96 118 4.7E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS01350 d85c44f7b9ed3c61feb12508848a5028 412 PRINTS PR00721 Stomatin signature 143 164 4.7E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS01350 d85c44f7b9ed3c61feb12508848a5028 412 PRINTS PR00721 Stomatin signature 178 195 4.7E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LK04_RS07580 fb565324b8e0b11a05617de66922167c 196 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 117 4.7E-46 T 22-04-2016 IPR006531 Gp5 N-terminal LK04_RS07580 fb565324b8e0b11a05617de66922167c 196 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 10 194 2.8E-58 T 22-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 LK04_RS14970 ec46d233f751edb13d69a648ad9a3f6b 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.2E-79 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 LK04_RS14970 ec46d233f751edb13d69a648ad9a3f6b 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.702 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 LK04_RS14970 ec46d233f751edb13d69a648ad9a3f6b 185 Gene3D G3DSA:1.10.132.20 67 184 1.3E-44 T 22-04-2016 IPR023584 Ribosome recycling factor domain LK04_RS14970 ec46d233f751edb13d69a648ad9a3f6b 185 SUPERFAMILY SSF55194 2 184 9.29E-72 T 22-04-2016 IPR023584 Ribosome recycling factor domain LK04_RS14970 ec46d233f751edb13d69a648ad9a3f6b 185 Pfam PF01765 Ribosome recycling factor 20 183 9.4E-63 T 22-04-2016 IPR023584 Ribosome recycling factor domain LK04_RS14970 ec46d233f751edb13d69a648ad9a3f6b 185 PANTHER PTHR20982 1 185 5.3E-84 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 LK04_RS15695 9f077cfd8c4ab81bdfb9519c8f3f29e1 282 SUPERFAMILY SSF56436 31 280 4.52E-50 T 22-04-2016 IPR016187 C-type lectin fold LK04_RS15695 9f077cfd8c4ab81bdfb9519c8f3f29e1 282 Gene3D G3DSA:3.90.1580.10 31 280 3.1E-49 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme LK04_RS15695 9f077cfd8c4ab81bdfb9519c8f3f29e1 282 PANTHER PTHR23150 12 242 4.2E-29 T 22-04-2016 LK04_RS15695 9f077cfd8c4ab81bdfb9519c8f3f29e1 282 PANTHER PTHR23150:SF19 12 242 4.2E-29 T 22-04-2016 LK04_RS15695 9f077cfd8c4ab81bdfb9519c8f3f29e1 282 Pfam PF03781 Sulfatase-modifying factor enzyme 1 30 245 1.1E-39 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme LK04_RS12160 8e607a00e4b53637953d4c1a569da5db 230 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 213 8.8E-79 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 LK04_RS12160 8e607a00e4b53637953d4c1a569da5db 230 PANTHER PTHR30098 1 230 7.8E-85 T 22-04-2016 LK04_RS12160 8e607a00e4b53637953d4c1a569da5db 230 PANTHER PTHR30098:SF2 1 230 7.8E-85 T 22-04-2016 LK04_RS12160 8e607a00e4b53637953d4c1a569da5db 230 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 230 96.673 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 LK04_RS12160 8e607a00e4b53637953d4c1a569da5db 230 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 6.8E-70 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 LK04_RS12160 8e607a00e4b53637953d4c1a569da5db 230 SUPERFAMILY SSF55729 2 228 2.28E-92 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS00750 087518c24711dda1e19e9ad4177cd495 200 PANTHER PTHR30086 1 190 1.1E-84 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS00750 087518c24711dda1e19e9ad4177cd495 200 Pfam PF01810 LysE type translocator 16 191 1.1E-18 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS00750 087518c24711dda1e19e9ad4177cd495 200 PANTHER PTHR30086:SF12 1 190 1.1E-84 T 22-04-2016 LK04_RS05160 1ae3c9198ff3969682d56343f46e96ec 80 Pfam PF06183 DinI-like family 21 76 3.3E-20 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like LK04_RS05160 1ae3c9198ff3969682d56343f46e96ec 80 PANTHER PTHR36572:SF1 2 79 1.6E-36 T 22-04-2016 LK04_RS05160 1ae3c9198ff3969682d56343f46e96ec 80 SUPERFAMILY SSF54857 2 77 1.96E-21 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like LK04_RS05160 1ae3c9198ff3969682d56343f46e96ec 80 Gene3D G3DSA:3.30.910.10 2 77 3.1E-23 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like LK04_RS05160 1ae3c9198ff3969682d56343f46e96ec 80 PANTHER PTHR36572 2 79 1.6E-36 T 22-04-2016 LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 SUPERFAMILY SSF69189 286 379 4.71E-27 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 1.1E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 1.1E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 1.1E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 PANTHER PTHR21581:SF4 18 401 8.8E-264 T 22-04-2016 LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 Gene3D G3DSA:2.60.410.10 286 377 8.5E-33 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 266 2.0E-100 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 SUPERFAMILY SSF56601 13 286 2.47E-83 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 SMART SM00936 286 377 7.5E-37 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 Gene3D G3DSA:3.40.710.10 30 285 1.2E-96 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 377 3.5E-26 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LK04_RS12320 f5a8aa15641cfe1bbd483e6df22a2db5 401 PANTHER PTHR21581 18 401 8.8E-264 T 22-04-2016 LK04_RS07760 6ba1b28d4d522309eabee99f618683a4 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 26.352 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 LK04_RS07760 6ba1b28d4d522309eabee99f618683a4 293 PANTHER PTHR10120:SF19 1 288 3.0E-111 T 22-04-2016 LK04_RS07760 6ba1b28d4d522309eabee99f618683a4 293 PANTHER PTHR10120 1 288 3.0E-111 T 22-04-2016 LK04_RS07760 6ba1b28d4d522309eabee99f618683a4 293 Pfam PF01435 Peptidase family M48 74 288 5.0E-39 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LK04_RS07760 6ba1b28d4d522309eabee99f618683a4 293 Gene3D G3DSA:3.30.2010.10 69 156 7.1E-32 T 22-04-2016 LK04_RS17150 dfa52491325b46ec1278af21a40d5f8a 303 PANTHER PTHR10088:SF5 5 299 8.3E-152 T 22-04-2016 LK04_RS17150 dfa52491325b46ec1278af21a40d5f8a 303 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.007 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 LK04_RS17150 dfa52491325b46ec1278af21a40d5f8a 303 SUPERFAMILY SSF53697 7 251 2.83E-72 T 22-04-2016 LK04_RS17150 dfa52491325b46ec1278af21a40d5f8a 303 PANTHER PTHR10088 5 299 8.3E-152 T 22-04-2016 LK04_RS17150 dfa52491325b46ec1278af21a40d5f8a 303 Pfam PF01380 SIS domain 133 212 1.2E-9 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS17150 dfa52491325b46ec1278af21a40d5f8a 303 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 LK04_RS17150 dfa52491325b46ec1278af21a40d5f8a 303 Gene3D G3DSA:3.40.50.10490 6 251 2.5E-92 T 22-04-2016 LK04_RS17150 dfa52491325b46ec1278af21a40d5f8a 303 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 2.6E-132 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 LK04_RS01525 177f9cebfbe9ff457ec6d337de70c3ec 446 PANTHER PTHR30624:SF1 2 446 1.4E-187 T 22-04-2016 LK04_RS01525 177f9cebfbe9ff457ec6d337de70c3ec 446 SUPERFAMILY SSF111283 13 445 3.14E-131 T 22-04-2016 LK04_RS01525 177f9cebfbe9ff457ec6d337de70c3ec 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 1.9E-55 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS01525 177f9cebfbe9ff457ec6d337de70c3ec 446 PANTHER PTHR30624 2 446 1.4E-187 T 22-04-2016 LK04_RS11435 25776cc342b517ab400b14e6afef8c1a 197 SUPERFAMILY SSF55729 12 185 5.22E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS11435 25776cc342b517ab400b14e6afef8c1a 197 Gene3D G3DSA:3.40.630.30 9 186 1.8E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS11435 25776cc342b517ab400b14e6afef8c1a 197 PANTHER PTHR13256:SF24 9 190 7.5E-84 T 22-04-2016 LK04_RS11435 25776cc342b517ab400b14e6afef8c1a 197 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 7.5E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS11435 25776cc342b517ab400b14e6afef8c1a 197 PANTHER PTHR13256 9 190 7.5E-84 T 22-04-2016 LK04_RS02950 b0b2a2bb7e81df42aadba16163f79fa3 193 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 191 36.271 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 LK04_RS02950 b0b2a2bb7e81df42aadba16163f79fa3 193 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 13 166 1.2E-13 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 LK04_RS02950 b0b2a2bb7e81df42aadba16163f79fa3 193 SUPERFAMILY SSF101327 8 176 1.03E-52 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 LK04_RS02950 b0b2a2bb7e81df42aadba16163f79fa3 193 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 177 8.3E-39 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 LK04_RS02950 b0b2a2bb7e81df42aadba16163f79fa3 193 PANTHER PTHR37528 2 193 1.1E-58 T 22-04-2016 LK04_RS15100 69e3a9aa518a70626719783dcc41116b 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 1.8E-51 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 LK04_RS15100 69e3a9aa518a70626719783dcc41116b 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LK04_RS15100 69e3a9aa518a70626719783dcc41116b 151 SUPERFAMILY SSF109635 9 109 1.44E-37 T 22-04-2016 LK04_RS15100 69e3a9aa518a70626719783dcc41116b 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.147 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 LK04_RS15100 69e3a9aa518a70626719783dcc41116b 151 SUPERFAMILY SSF57716 111 149 1.21E-9 T 22-04-2016 LK04_RS15100 69e3a9aa518a70626719783dcc41116b 151 PANTHER PTHR33823 8 149 3.4E-70 T 22-04-2016 LK04_RS15100 69e3a9aa518a70626719783dcc41116b 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 4.5E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 LK04_RS15100 69e3a9aa518a70626719783dcc41116b 151 PANTHER PTHR33823:SF2 8 149 3.4E-70 T 22-04-2016 LK04_RS12410 e4c00698d431d11b48390a344e0247ed 505 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 483 6.5E-128 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LK04_RS12410 e4c00698d431d11b48390a344e0247ed 505 Pfam PF02321 Outer membrane efflux protein 303 481 2.2E-32 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS12410 e4c00698d431d11b48390a344e0247ed 505 Pfam PF02321 Outer membrane efflux protein 65 271 2.9E-35 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS12410 e4c00698d431d11b48390a344e0247ed 505 SUPERFAMILY SSF56954 4 486 1.7E-120 T 22-04-2016 LK04_RS12410 e4c00698d431d11b48390a344e0247ed 505 Gene3D G3DSA:1.20.1600.10 54 486 2.2E-125 T 22-04-2016 LK04_RS12410 e4c00698d431d11b48390a344e0247ed 505 PANTHER PTHR30203 7 502 1.7E-137 T 22-04-2016 LK04_RS12410 e4c00698d431d11b48390a344e0247ed 505 PANTHER PTHR30203:SF3 7 502 1.7E-137 T 22-04-2016 LK04_RS17560 55a862d63200b9407858b22d81dfa29f 815 PANTHER PTHR11468 14 815 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LK04_RS17560 55a862d63200b9407858b22d81dfa29f 815 Gene3D G3DSA:3.40.50.2000 480 795 2.1E-141 T 22-04-2016 LK04_RS17560 55a862d63200b9407858b22d81dfa29f 815 PANTHER PTHR11468:SF3 14 815 0.0 T 22-04-2016 LK04_RS17560 55a862d63200b9407858b22d81dfa29f 815 SUPERFAMILY SSF53756 9 814 0.0 T 22-04-2016 LK04_RS17560 55a862d63200b9407858b22d81dfa29f 815 Gene3D G3DSA:3.40.50.2000 11 479 1.8E-208 T 22-04-2016 LK04_RS17560 55a862d63200b9407858b22d81dfa29f 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 15 810 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LK04_RS17560 55a862d63200b9407858b22d81dfa29f 815 PIRSF PIRSF000460 2 815 2.7E-233 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LK04_RS17560 55a862d63200b9407858b22d81dfa29f 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LK04_RS17560 55a862d63200b9407858b22d81dfa29f 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LK04_RS10240 300606bb3ab403d604cf236b43887bcd 298 Pfam PF00248 Aldo/keto reductase family 16 291 1.8E-59 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS10240 300606bb3ab403d604cf236b43887bcd 298 PANTHER PTHR11732 2 298 3.0E-149 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS10240 300606bb3ab403d604cf236b43887bcd 298 SUPERFAMILY SSF51430 4 295 1.09E-70 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS10240 300606bb3ab403d604cf236b43887bcd 298 Gene3D G3DSA:3.20.20.100 4 292 3.2E-64 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS10240 300606bb3ab403d604cf236b43887bcd 298 PANTHER PTHR11732:SF10 2 298 3.0E-149 T 22-04-2016 LK04_RS10240 300606bb3ab403d604cf236b43887bcd 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 2.1E-6 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS10240 300606bb3ab403d604cf236b43887bcd 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 2.1E-6 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS17880 c527386739284464bd22b11576b0036d 483 PANTHER PTHR32024 1 483 9.3E-280 T 22-04-2016 LK04_RS17880 c527386739284464bd22b11576b0036d 483 PIRSF PIRSF006247 1 483 6.6E-184 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 LK04_RS17880 c527386739284464bd22b11576b0036d 483 PANTHER PTHR32024:SF2 1 483 9.3E-280 T 22-04-2016 LK04_RS17880 c527386739284464bd22b11576b0036d 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 4.4E-129 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 LK04_RS17880 c527386739284464bd22b11576b0036d 483 Pfam PF02386 Cation transport protein 37 477 2.9E-94 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 LK04_RS07185 24940ace1e3f6f5da511c418b3fa6ba7 195 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 1.2E-54 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LK04_RS07185 24940ace1e3f6f5da511c418b3fa6ba7 195 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 190 5.5E-71 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LK04_RS07185 24940ace1e3f6f5da511c418b3fa6ba7 195 PANTHER PTHR17224 1 195 6.1E-85 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LK04_RS07185 24940ace1e3f6f5da511c418b3fa6ba7 195 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 LK04_RS07185 24940ace1e3f6f5da511c418b3fa6ba7 195 Gene3D G3DSA:3.40.50.1470 4 193 1.6E-72 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LK04_RS07185 24940ace1e3f6f5da511c418b3fa6ba7 195 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 36.722 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LK04_RS07185 24940ace1e3f6f5da511c418b3fa6ba7 195 SUPERFAMILY SSF53178 4 193 7.46E-71 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LK04_RS07185 24940ace1e3f6f5da511c418b3fa6ba7 195 PANTHER PTHR17224:SF1 1 195 6.1E-85 T 22-04-2016 LK04_RS07185 24940ace1e3f6f5da511c418b3fa6ba7 195 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 LK04_RS07065 5d0f85911380d922071dd0e2d267eb0c 328 PANTHER PTHR10314:SF105 6 317 1.8E-146 T 22-04-2016 LK04_RS07065 5d0f85911380d922071dd0e2d267eb0c 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 14 316 9.3E-55 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS07065 5d0f85911380d922071dd0e2d267eb0c 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 64.815 T 22-04-2016 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 LK04_RS07065 5d0f85911380d922071dd0e2d267eb0c 328 PIRSF PIRSF006278 1 328 3.1E-95 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase LK04_RS07065 5d0f85911380d922071dd0e2d267eb0c 328 PANTHER PTHR10314 6 317 1.8E-146 T 22-04-2016 LK04_RS07065 5d0f85911380d922071dd0e2d267eb0c 328 SUPERFAMILY SSF53686 7 325 1.57E-84 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LK04_RS07065 5d0f85911380d922071dd0e2d267eb0c 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 327 5.7E-125 T 22-04-2016 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 LK04_RS07065 5d0f85911380d922071dd0e2d267eb0c 328 Gene3D G3DSA:3.40.50.1100 112 325 4.8E-67 T 22-04-2016 LK04_RS04410 0350c957a45c051f468c8ea03c843acc 155 PIRSF PIRSF000239 1 155 1.6E-16 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 LK04_RS04410 0350c957a45c051f468c8ea03c843acc 155 SUPERFAMILY SSF52833 3 154 5.7E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS04410 0350c957a45c051f468c8ea03c843acc 155 PANTHER PTHR10681 1 154 5.8E-49 T 22-04-2016 LK04_RS04410 0350c957a45c051f468c8ea03c843acc 155 Pfam PF00578 AhpC/TSA family 7 134 7.5E-38 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LK04_RS04410 0350c957a45c051f468c8ea03c843acc 155 Gene3D G3DSA:3.40.30.10 2 154 1.1E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS09110 da8ed31825857e2325e4994d3c0659e7 581 Gene3D G3DSA:3.30.1180.20 183 334 9.9E-49 T 22-04-2016 LK04_RS09110 da8ed31825857e2325e4994d3c0659e7 581 Pfam PF02734 DAK2 domain 394 567 5.6E-47 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 LK04_RS09110 da8ed31825857e2325e4994d3c0659e7 581 SUPERFAMILY SSF101473 365 568 2.49E-47 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 LK04_RS09110 da8ed31825857e2325e4994d3c0659e7 581 SUPERFAMILY SSF82549 12 333 2.88E-105 T 22-04-2016 LK04_RS09110 da8ed31825857e2325e4994d3c0659e7 581 Pfam PF02733 Dak1 domain 17 330 1.6E-109 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 LK04_RS09110 da8ed31825857e2325e4994d3c0659e7 581 SMART SM01120 393 569 5.2E-60 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 LK04_RS09110 da8ed31825857e2325e4994d3c0659e7 581 PANTHER PTHR28629 1 573 2.1E-178 T 22-04-2016 LK04_RS09110 da8ed31825857e2325e4994d3c0659e7 581 Gene3D G3DSA:3.40.50.10440 13 181 5.2E-56 T 22-04-2016 LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 PANTHER PTHR30363 11 267 4.5E-62 T 22-04-2016 LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 SUPERFAMILY SSF46785 11 80 1.38E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 104 115 - T 22-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 Pfam PF00455 DeoR C terminal sensor domain 83 242 2.1E-42 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 SMART SM01134 81 243 3.4E-56 T 22-04-2016 LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 Gene3D G3DSA:3.40.50.1360 84 231 1.4E-11 T 22-04-2016 LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 SUPERFAMILY SSF100950 82 243 8.48E-24 T 22-04-2016 LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 Gene3D G3DSA:1.10.10.10 10 64 5.0E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 SMART SM00420 14 66 7.7E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 PANTHER PTHR30363:SF1 11 267 4.5E-62 T 22-04-2016 LK04_RS10630 b13b728b524cb526efcad6142f8b92db 273 Pfam PF08220 DeoR-like helix-turn-helix domain 14 68 7.1E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS10925 a1463425bdb8583a0b61085b011a6c03 503 PANTHER PTHR10283 17 85 6.4E-167 T 22-04-2016 LK04_RS10925 a1463425bdb8583a0b61085b011a6c03 503 PANTHER PTHR10283 102 502 6.4E-167 T 22-04-2016 LK04_RS10925 a1463425bdb8583a0b61085b011a6c03 503 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 41 498 1.9E-152 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS10925 a1463425bdb8583a0b61085b011a6c03 503 PANTHER PTHR10283:SF13 17 85 6.4E-167 T 22-04-2016 IPR030676 Citrate carrier CitT-related LK04_RS10925 a1463425bdb8583a0b61085b011a6c03 503 PANTHER PTHR10283:SF13 102 502 6.4E-167 T 22-04-2016 IPR030676 Citrate carrier CitT-related LK04_RS10925 a1463425bdb8583a0b61085b011a6c03 503 Pfam PF00939 Sodium:sulfate symporter transmembrane region 23 501 2.2E-151 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS10925 a1463425bdb8583a0b61085b011a6c03 503 PIRSF PIRSF002457 9 503 5.9E-136 T 22-04-2016 IPR030676 Citrate carrier CitT-related LK04_RS18620 a1490ee250dc59161be13d8098fc580c 331 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 38.231 T 22-04-2016 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 UniPathway: UPA00566 LK04_RS18620 a1490ee250dc59161be13d8098fc580c 331 Pfam PF01757 Acyltransferase family 5 319 1.1E-30 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LK04_RS13405 c31d119c83a4f32d569f154c5df8cc40 216 SUPERFAMILY SSF55681 4 205 1.74E-69 T 22-04-2016 LK04_RS13405 c31d119c83a4f32d569f154c5df8cc40 216 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 8.8E-6 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LK04_RS13405 c31d119c83a4f32d569f154c5df8cc40 216 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 1.0E-17 T 22-04-2016 LK04_RS13405 c31d119c83a4f32d569f154c5df8cc40 216 PIRSF PIRSF016262 1 214 1.4E-55 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LK04_RS13405 c31d119c83a4f32d569f154c5df8cc40 216 Gene3D G3DSA:3.90.1550.10 4 202 2.5E-69 T 22-04-2016 LK04_RS13405 c31d119c83a4f32d569f154c5df8cc40 216 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 36.903 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LK04_RS13405 c31d119c83a4f32d569f154c5df8cc40 216 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 27 202 2.0E-74 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LK04_RS13405 c31d119c83a4f32d569f154c5df8cc40 216 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LK04_RS13405 c31d119c83a4f32d569f154c5df8cc40 216 PANTHER PTHR10993 6 216 1.1E-81 T 22-04-2016 LK04_RS11950 620e0ffeda80fcdae772b1be6b218cc1 381 PANTHER PTHR30011 1 379 2.5E-211 T 22-04-2016 LK04_RS11950 620e0ffeda80fcdae772b1be6b218cc1 381 SUPERFAMILY SSF51679 5 349 7.07E-99 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS11950 620e0ffeda80fcdae772b1be6b218cc1 381 Gene3D G3DSA:3.20.20.30 5 253 9.2E-105 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS11950 620e0ffeda80fcdae772b1be6b218cc1 381 Gene3D G3DSA:3.20.20.30 287 350 9.2E-105 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS11950 620e0ffeda80fcdae772b1be6b218cc1 381 Pfam PF00296 Luciferase-like monooxygenase 5 325 1.8E-87 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS11950 620e0ffeda80fcdae772b1be6b218cc1 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 70.139 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 LK04_RS11950 620e0ffeda80fcdae772b1be6b218cc1 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 5 349 3.4E-191 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 LK04_RS11950 620e0ffeda80fcdae772b1be6b218cc1 381 PANTHER PTHR30011:SF1 1 379 2.5E-211 T 22-04-2016 LK04_RS06345 914720bafdbdde73654225280fe9c283 255 Gene3D G3DSA:3.40.50.620 27 174 2.4E-45 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS06345 914720bafdbdde73654225280fe9c283 255 PANTHER PTHR30336:SF5 89 247 1.3E-20 T 22-04-2016 LK04_RS06345 914720bafdbdde73654225280fe9c283 255 PANTHER PTHR30336:SF5 59 69 1.3E-20 T 22-04-2016 LK04_RS06345 914720bafdbdde73654225280fe9c283 255 PANTHER PTHR30336 89 247 1.3E-20 T 22-04-2016 LK04_RS06345 914720bafdbdde73654225280fe9c283 255 PANTHER PTHR30336 59 69 1.3E-20 T 22-04-2016 LK04_RS06345 914720bafdbdde73654225280fe9c283 255 Pfam PF02698 DUF218 domain 44 171 5.4E-12 T 22-04-2016 IPR003848 Domain of unknown function DUF218 LK04_RS09170 9e6cec9c5bd88067c65e1d4756b6d4eb 764 SUPERFAMILY SSF141571 544 683 4.45E-22 T 22-04-2016 LK04_RS09170 9e6cec9c5bd88067c65e1d4756b6d4eb 764 PANTHER PTHR14136:SF0 482 748 4.3E-21 T 22-04-2016 LK04_RS09170 9e6cec9c5bd88067c65e1d4756b6d4eb 764 Pfam PF00805 Pentapeptide repeats (8 copies) 452 490 2.0E-10 T 22-04-2016 IPR001646 Pentapeptide repeat LK04_RS09170 9e6cec9c5bd88067c65e1d4756b6d4eb 764 PANTHER PTHR14136 482 748 4.3E-21 T 22-04-2016 LK04_RS09170 9e6cec9c5bd88067c65e1d4756b6d4eb 764 Pfam PF13599 Pentapeptide repeats (9 copies) 501 573 7.3E-7 T 22-04-2016 IPR001646 Pentapeptide repeat LK04_RS09170 9e6cec9c5bd88067c65e1d4756b6d4eb 764 Pfam PF13599 Pentapeptide repeats (9 copies) 636 701 5.6E-9 T 22-04-2016 IPR001646 Pentapeptide repeat LK04_RS09170 9e6cec9c5bd88067c65e1d4756b6d4eb 764 SUPERFAMILY SSF141571 435 569 4.58E-26 T 22-04-2016 LK04_RS09170 9e6cec9c5bd88067c65e1d4756b6d4eb 764 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 106 229 2.2E-28 T 22-04-2016 IPR018683 Domain of unknown function DUF2169 LK04_RS09170 9e6cec9c5bd88067c65e1d4756b6d4eb 764 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 20 102 2.5E-9 T 22-04-2016 IPR018683 Domain of unknown function DUF2169 LK04_RS07785 c7f00a82cf8c19297141ad55cb177db8 334 SUPERFAMILY SSF56281 72 291 3.67E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS07785 c7f00a82cf8c19297141ad55cb177db8 334 Pfam PF12706 Beta-lactamase superfamily domain 88 286 1.6E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS07785 c7f00a82cf8c19297141ad55cb177db8 334 PANTHER PTHR15032:SF4 34 332 1.5E-117 T 22-04-2016 LK04_RS07785 c7f00a82cf8c19297141ad55cb177db8 334 Gene3D G3DSA:3.60.15.10 62 329 1.8E-83 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS07785 c7f00a82cf8c19297141ad55cb177db8 334 PANTHER PTHR15032 34 332 1.5E-117 T 22-04-2016 LK04_RS06355 46c69fd4a1a8c4a5cf08f20cf63dd6b3 509 SUPERFAMILY SSF53720 20 503 1.57E-99 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS06355 46c69fd4a1a8c4a5cf08f20cf63dd6b3 509 Pfam PF00171 Aldehyde dehydrogenase family 20 418 3.2E-46 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS06355 46c69fd4a1a8c4a5cf08f20cf63dd6b3 509 Gene3D G3DSA:3.40.309.10 268 456 2.3E-53 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS06355 46c69fd4a1a8c4a5cf08f20cf63dd6b3 509 PANTHER PTHR11699 8 465 8.7E-140 T 22-04-2016 LK04_RS06355 46c69fd4a1a8c4a5cf08f20cf63dd6b3 509 PANTHER PTHR11699:SF10 8 465 8.7E-140 T 22-04-2016 LK04_RS06355 46c69fd4a1a8c4a5cf08f20cf63dd6b3 509 Gene3D G3DSA:3.40.605.10 7 260 5.5E-44 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS07540 2d407494333a69ace67e7bf2cf9a90a5 169 PANTHER PTHR35861 1 169 1.4E-49 T 22-04-2016 LK04_RS07540 2d407494333a69ace67e7bf2cf9a90a5 169 Pfam PF04985 Phage tail tube protein FII 4 167 6.2E-58 T 22-04-2016 IPR006498 Tail tube protein LK04_RS07540 2d407494333a69ace67e7bf2cf9a90a5 169 PANTHER PTHR35861:SF2 1 169 1.4E-49 T 22-04-2016 LK04_RS07540 2d407494333a69ace67e7bf2cf9a90a5 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 168 7.3E-45 T 22-04-2016 IPR006498 Tail tube protein LK04_RS07270 99f8e88a099a2912fe2b9f771bb8fc39 371 Gene3D G3DSA:2.60.200.20 13 105 4.8E-14 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 LK04_RS07270 99f8e88a099a2912fe2b9f771bb8fc39 371 Pfam PF00498 FHA domain 25 93 2.0E-10 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 LK04_RS07270 99f8e88a099a2912fe2b9f771bb8fc39 371 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 114 358 4.5E-43 T 22-04-2016 IPR017735 Type VI secretion system, FHA domain-containing protein LK04_RS07270 99f8e88a099a2912fe2b9f771bb8fc39 371 SUPERFAMILY SSF49879 5 103 1.19E-17 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 LK04_RS11405 b183afa20b4c71e8eea45335754d9aab 219 SMART SM00858 95 157 3.1E-9 T 22-04-2016 IPR013974 SAF domain LK04_RS11405 b183afa20b4c71e8eea45335754d9aab 219 Pfam PF13144 Chaperone for flagella basal body P-ring formation 26 215 6.1E-42 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal LK04_RS11405 b183afa20b4c71e8eea45335754d9aab 219 PANTHER PTHR36307 66 217 1.2E-28 T 22-04-2016 LK04_RS11405 b183afa20b4c71e8eea45335754d9aab 219 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 1.5E-39 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal LK04_RS09080 0b1f98414ae0465ece29d03a5c2aa62e 425 PANTHER PTHR30061 1 425 1.0E-91 T 22-04-2016 LK04_RS09080 0b1f98414ae0465ece29d03a5c2aa62e 425 SUPERFAMILY SSF53850 29 418 4.73E-74 T 22-04-2016 LK04_RS09080 0b1f98414ae0465ece29d03a5c2aa62e 425 Gene3D G3DSA:3.40.190.10 152 352 5.3E-46 T 22-04-2016 LK04_RS09080 0b1f98414ae0465ece29d03a5c2aa62e 425 Pfam PF13416 Bacterial extracellular solute-binding protein 47 359 7.6E-46 T 22-04-2016 LK04_RS09080 0b1f98414ae0465ece29d03a5c2aa62e 425 Gene3D G3DSA:3.40.190.10 40 151 1.9E-5 T 22-04-2016 LK04_RS09080 0b1f98414ae0465ece29d03a5c2aa62e 425 PANTHER PTHR30061:SF7 1 425 1.0E-91 T 22-04-2016 LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 PIRSF PIRSF000161 2 270 4.3E-94 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 PANTHER PTHR20836:SF0 1 271 4.2E-101 T 22-04-2016 LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 152 169 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 Gene3D G3DSA:3.40.50.720 2 165 1.8E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 267 35.413 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 267 1.9E-106 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 266 4.2E-44 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 127 3.7E-43 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 SUPERFAMILY SSF51735 4 128 1.27E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 SUPERFAMILY SSF51735 238 268 1.27E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 SUPERFAMILY SSF55347 129 238 1.94E-37 T 22-04-2016 LK04_RS15590 e6e9f5fcd9f0e4ff543169583b5497ff 271 PANTHER PTHR20836 1 271 4.2E-101 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 Gene3D G3DSA:3.40.50.300 198 381 8.9E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 Gene3D G3DSA:3.40.50.300 456 632 2.7E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 Pfam PF00271 Helicase conserved C-terminal domain 521 589 5.1E-5 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 SMART SM00487 195 391 4.2E-15 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 SUPERFAMILY SSF52540 220 440 1.94E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 SUPERFAMILY SSF52540 503 601 1.94E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 Pfam PF00270 DEAD/DEAH box helicase 221 364 4.8E-12 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.302 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 PANTHER PTHR30580 1 731 7.6E-284 T 22-04-2016 LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 SMART SM00490 492 589 1.2E-8 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS19620 a2e5e80caeb7a214da94580e5d7169a5 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 4.5E-199 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 LK04_RS02410 6fde2b03e1797db77c673be8bdbf94b8 434 Gene3D G3DSA:1.20.1250.20 241 426 4.1E-24 T 22-04-2016 LK04_RS02410 6fde2b03e1797db77c673be8bdbf94b8 434 PANTHER PTHR11662 1 429 2.7E-163 T 22-04-2016 LK04_RS02410 6fde2b03e1797db77c673be8bdbf94b8 434 PANTHER PTHR11662:SF3 1 429 2.7E-163 T 22-04-2016 LK04_RS02410 6fde2b03e1797db77c673be8bdbf94b8 434 SUPERFAMILY SSF103473 4 421 5.89E-89 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02410 6fde2b03e1797db77c673be8bdbf94b8 434 Gene3D G3DSA:1.20.1250.20 10 213 1.5E-45 T 22-04-2016 LK04_RS02410 6fde2b03e1797db77c673be8bdbf94b8 434 Pfam PF07690 Major Facilitator Superfamily 21 384 9.2E-51 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS15825 1536829451387af7e606a9da34865572 238 Gene3D G3DSA:3.40.50.2300 2 124 3.3E-35 T 22-04-2016 LK04_RS15825 1536829451387af7e606a9da34865572 238 SMART SM00862 156 232 7.7E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS15825 1536829451387af7e606a9da34865572 238 Gene3D G3DSA:1.10.10.10 135 234 3.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15825 1536829451387af7e606a9da34865572 238 Pfam PF00072 Response regulator receiver domain 6 113 5.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS15825 1536829451387af7e606a9da34865572 238 PANTHER PTHR26402 4 238 3.4E-153 T 22-04-2016 LK04_RS15825 1536829451387af7e606a9da34865572 238 PANTHER PTHR26402:SF586 4 238 3.4E-153 T 22-04-2016 LK04_RS15825 1536829451387af7e606a9da34865572 238 SMART SM00448 4 114 5.1E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS15825 1536829451387af7e606a9da34865572 238 SUPERFAMILY SSF52172 2 125 6.4E-36 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS15825 1536829451387af7e606a9da34865572 238 SUPERFAMILY SSF46894 136 234 1.39E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS15825 1536829451387af7e606a9da34865572 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 1.2E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS02515 6fdee7075976c2629b864735e72c71b8 186 SUPERFAMILY SSF54909 5 98 1.04E-17 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS02515 6fdee7075976c2629b864735e72c71b8 186 PANTHER PTHR40057 2 185 6.6E-28 T 22-04-2016 LK04_RS02515 6fdee7075976c2629b864735e72c71b8 186 PANTHER PTHR40057:SF1 2 185 6.6E-28 T 22-04-2016 LK04_RS02515 6fdee7075976c2629b864735e72c71b8 186 Gene3D G3DSA:3.30.70.900 11 96 3.6E-12 T 22-04-2016 LK04_RS02515 6fdee7075976c2629b864735e72c71b8 186 Pfam PF03992 Antibiotic biosynthesis monooxygenase 10 80 3.6E-5 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain LK04_RS04490 d1a3def54fe24f4d0049f49719323f36 500 PIRSF PIRSF006060 20 494 9.2E-67 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS04490 d1a3def54fe24f4d0049f49719323f36 500 PANTHER PTHR11785 1 499 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS04490 d1a3def54fe24f4d0049f49719323f36 500 PANTHER PTHR11785:SF25 1 499 0.0 T 22-04-2016 LK04_RS04490 d1a3def54fe24f4d0049f49719323f36 500 Pfam PF00324 Amino acid permease 35 471 5.7E-125 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LK04_RS04490 d1a3def54fe24f4d0049f49719323f36 500 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 SUPERFAMILY SSF53850 91 298 2.1E-32 T 22-04-2016 LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 PANTHER PTHR30126 1 295 4.8E-50 T 22-04-2016 LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 Gene3D G3DSA:3.40.190.10 176 260 1.7E-11 T 22-04-2016 LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 Pfam PF03466 LysR substrate binding domain 89 295 2.1E-30 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 Gene3D G3DSA:3.40.190.10 91 175 2.2E-15 T 22-04-2016 LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.5E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 Gene3D G3DSA:1.10.10.10 4 85 2.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08630 faa29ee250d276ce76f5b3babfc88c9f 301 SUPERFAMILY SSF46785 5 111 9.52E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09365 7c1f24ce05458d3a48119e338147991b 797 Pfam PF17137 Domain of unknown function (DUF5110) 700 767 1.6E-7 T 22-04-2016 IPR033403 Domain of unknown function DUF5110 LK04_RS09365 7c1f24ce05458d3a48119e338147991b 797 SUPERFAMILY SSF51445 247 594 2.08E-71 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS09365 7c1f24ce05458d3a48119e338147991b 797 Pfam PF01055 Glycosyl hydrolases family 31 238 682 1.7E-117 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 LK04_RS09365 7c1f24ce05458d3a48119e338147991b 797 PANTHER PTHR22762:SF7 9 783 4.2E-262 T 22-04-2016 LK04_RS09365 7c1f24ce05458d3a48119e338147991b 797 Pfam PF13802 Galactose mutarotase-like 146 213 2.6E-22 T 22-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain LK04_RS09365 7c1f24ce05458d3a48119e338147991b 797 PANTHER PTHR22762 9 783 4.2E-262 T 22-04-2016 LK04_RS09365 7c1f24ce05458d3a48119e338147991b 797 SUPERFAMILY SSF51011 597 678 5.47E-19 T 22-04-2016 LK04_RS09365 7c1f24ce05458d3a48119e338147991b 797 SUPERFAMILY SSF74650 2 242 7.85E-43 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LK04_RS15980 11b0b22f7d5827c11713a3c0be27c4a4 136 Gene3D G3DSA:3.40.50.10220 26 134 1.1E-34 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15980 11b0b22f7d5827c11713a3c0be27c4a4 136 PIRSF PIRSF029225 2 131 3.0E-40 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15980 11b0b22f7d5827c11713a3c0be27c4a4 136 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 38 125 1.0E-17 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15980 11b0b22f7d5827c11713a3c0be27c4a4 136 Pfam PF03603 DNA polymerase III psi subunit 3 127 3.6E-44 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS15980 11b0b22f7d5827c11713a3c0be27c4a4 136 SUPERFAMILY SSF102220 28 134 2.09E-28 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LK04_RS00095 21a33cae9836791b0e0df304b98c12a9 351 ProSitePatterns PS00869 Renal dipeptidase active site. 132 154 - T 22-04-2016 IPR000180 Membrane dipeptidase, active site GO:0006508|GO:0008235|GO:0008239|GO:0016805 MetaCyc: PWY-7533 LK04_RS00095 21a33cae9836791b0e0df304b98c12a9 351 Gene3D G3DSA:3.20.20.140 8 350 3.4E-101 T 22-04-2016 LK04_RS00095 21a33cae9836791b0e0df304b98c12a9 351 SUPERFAMILY SSF51556 8 349 1.7E-85 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS00095 21a33cae9836791b0e0df304b98c12a9 351 PANTHER PTHR10443 8 349 2.4E-79 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 LK04_RS00095 21a33cae9836791b0e0df304b98c12a9 351 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 7 346 3.0E-94 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 LK04_RS16480 f704647a406ff31646ebd0177b464d54 403 Pfam PF11806 Domain of unknown function (DUF3327) 34 160 5.1E-43 T 22-04-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 LK04_RS16480 f704647a406ff31646ebd0177b464d54 403 PANTHER PTHR10907:SF55 74 359 3.0E-62 T 22-04-2016 LK04_RS16480 f704647a406ff31646ebd0177b464d54 403 Gene3D G3DSA:2.60.40.10 7 148 1.7E-48 T 22-04-2016 IPR013783 Immunoglobulin-like fold LK04_RS16480 f704647a406ff31646ebd0177b464d54 403 SUPERFAMILY SSF53474 169 400 1.67E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS16480 f704647a406ff31646ebd0177b464d54 403 SUPERFAMILY SSF81296 7 155 8.12E-43 T 22-04-2016 IPR014756 Immunoglobulin E-set LK04_RS16480 f704647a406ff31646ebd0177b464d54 403 Gene3D G3DSA:3.40.50.1820 153 400 1.7E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS16480 f704647a406ff31646ebd0177b464d54 403 PANTHER PTHR10907 74 359 3.0E-62 T 22-04-2016 LK04_RS16480 f704647a406ff31646ebd0177b464d54 403 Pfam PF00756 Putative esterase 180 396 2.0E-35 T 22-04-2016 IPR000801 Putative esterase LK04_RS06880 26210759f886696243a161b7f1bc0066 64 Pfam PF10781 Dextransucrase DSRB 1 60 5.9E-37 T 22-04-2016 IPR019717 Dextransucrase DSRB LK04_RS06880 26210759f886696243a161b7f1bc0066 64 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 27.057 T 22-04-2016 IPR019717 Dextransucrase DSRB LK04_RS11140 9559a0f4c9b88c106eaf6f4e4f874280 212 SUPERFAMILY SSF55120 33 207 2.08E-40 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS11140 9559a0f4c9b88c106eaf6f4e4f874280 212 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 69 83 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LK04_RS11140 9559a0f4c9b88c106eaf6f4e4f874280 212 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 38 208 2.6E-55 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LK04_RS11140 9559a0f4c9b88c106eaf6f4e4f874280 212 PANTHER PTHR21600 1 135 1.1E-86 T 22-04-2016 LK04_RS11140 9559a0f4c9b88c106eaf6f4e4f874280 212 PANTHER PTHR21600 153 210 1.1E-86 T 22-04-2016 LK04_RS11140 9559a0f4c9b88c106eaf6f4e4f874280 212 Pfam PF00849 RNA pseudouridylate synthase 61 179 8.9E-11 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS11140 9559a0f4c9b88c106eaf6f4e4f874280 212 PANTHER PTHR21600:SF23 1 135 1.1E-86 T 22-04-2016 LK04_RS11140 9559a0f4c9b88c106eaf6f4e4f874280 212 PANTHER PTHR21600:SF23 153 210 1.1E-86 T 22-04-2016 LK04_RS18020 3e2d0271d914741ce0a14813712368b1 207 PANTHER PTHR30086 1 207 1.8E-123 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS18020 3e2d0271d914741ce0a14813712368b1 207 PIRSF PIRSF006324 1 207 1.1E-40 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS18020 3e2d0271d914741ce0a14813712368b1 207 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 203 1.1E-63 T 22-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 LK04_RS18020 3e2d0271d914741ce0a14813712368b1 207 Pfam PF01810 LysE type translocator 14 206 4.8E-51 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS18020 3e2d0271d914741ce0a14813712368b1 207 PANTHER PTHR30086:SF1 1 207 1.8E-123 T 22-04-2016 LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 Gene3D G3DSA:1.20.1250.20 265 422 1.7E-11 T 22-04-2016 LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 Gene3D G3DSA:1.20.1250.20 18 185 8.8E-19 T 22-04-2016 LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 Gene3D G3DSA:1.20.1250.20 473 499 1.7E-11 T 22-04-2016 LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 PANTHER PTHR23501 13 502 5.5E-62 T 22-04-2016 LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 2.1E-5 T 22-04-2016 LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 402 421 2.1E-5 T 22-04-2016 LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 79 101 2.1E-5 T 22-04-2016 LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 Pfam PF07690 Major Facilitator Superfamily 20 409 2.1E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 SUPERFAMILY SSF103473 472 501 7.72E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 SUPERFAMILY SSF103473 8 199 7.72E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05235 db17532e5b61ae7ff8a6add025bef94e 503 SUPERFAMILY SSF103473 250 421 7.72E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS04195 833494cc8654986f372cc438b99532f0 337 Gene3D G3DSA:1.10.260.40 8 81 2.3E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS04195 833494cc8654986f372cc438b99532f0 337 Pfam PF13413 Helix-turn-helix domain 18 78 7.2E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS04195 833494cc8654986f372cc438b99532f0 337 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 337 42.986 T 22-04-2016 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 LK04_RS04195 833494cc8654986f372cc438b99532f0 337 PANTHER PTHR34475 2 334 7.8E-49 T 22-04-2016 LK04_RS04195 833494cc8654986f372cc438b99532f0 337 SUPERFAMILY SSF47413 14 81 4.5E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS04195 833494cc8654986f372cc438b99532f0 337 Pfam PF13464 Domain of unknown function (DUF4115) 260 334 5.8E-24 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 LK04_RS04195 833494cc8654986f372cc438b99532f0 337 SMART SM00530 18 79 9.5E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS04195 833494cc8654986f372cc438b99532f0 337 PANTHER PTHR34475:SF1 2 334 7.8E-49 T 22-04-2016 LK04_RS06465 9fdba92c85ae9bc3bf0de727b889b094 460 Pfam PF04030 D-arabinono-1,4-lactone oxidase 189 456 1.4E-45 T 22-04-2016 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 LK04_RS06465 9fdba92c85ae9bc3bf0de727b889b094 460 SUPERFAMILY SSF56176 22 195 1.54E-29 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS06465 9fdba92c85ae9bc3bf0de727b889b094 460 PANTHER PTHR13878:SF63 24 459 5.3E-68 T 22-04-2016 LK04_RS06465 9fdba92c85ae9bc3bf0de727b889b094 460 Pfam PF01565 FAD binding domain 36 165 2.9E-17 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LK04_RS06465 9fdba92c85ae9bc3bf0de727b889b094 460 PANTHER PTHR13878 24 459 5.3E-68 T 22-04-2016 LK04_RS06465 9fdba92c85ae9bc3bf0de727b889b094 460 Gene3D G3DSA:3.30.465.10 91 194 1.1E-20 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS06465 9fdba92c85ae9bc3bf0de727b889b094 460 PIRSF PIRSF000136 11 460 3.6E-58 T 22-04-2016 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 LK04_RS06465 9fdba92c85ae9bc3bf0de727b889b094 460 SUPERFAMILY SSF55103 182 451 2.78E-8 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LK04_RS15975 875c728dec992279dcecd2f8a9aa8598 146 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 15 142 1.7E-38 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 LK04_RS15975 875c728dec992279dcecd2f8a9aa8598 146 SUPERFAMILY SSF55729 1 146 2.53E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS15975 875c728dec992279dcecd2f8a9aa8598 146 Gene3D G3DSA:3.40.630.30 3 146 3.8E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS15975 875c728dec992279dcecd2f8a9aa8598 146 PANTHER PTHR23091 2 146 1.3E-31 T 22-04-2016 LK04_RS15975 875c728dec992279dcecd2f8a9aa8598 146 PANTHER PTHR23091:SF247 2 146 1.3E-31 T 22-04-2016 LK04_RS15975 875c728dec992279dcecd2f8a9aa8598 146 Pfam PF00583 Acetyltransferase (GNAT) family 46 121 2.9E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS11125 f452b683b1fd323e994ceee9a4342201 308 PANTHER PTHR10859 2 307 4.4E-165 T 22-04-2016 LK04_RS11125 f452b683b1fd323e994ceee9a4342201 308 SUPERFAMILY SSF53448 2 244 7.03E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS11125 f452b683b1fd323e994ceee9a4342201 308 PANTHER PTHR10859:SF81 2 307 4.4E-165 T 22-04-2016 LK04_RS11125 f452b683b1fd323e994ceee9a4342201 308 Gene3D G3DSA:3.90.550.10 2 148 1.8E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS11125 f452b683b1fd323e994ceee9a4342201 308 Pfam PF00535 Glycosyl transferase family 2 4 163 1.2E-27 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS11150 003e8ec525404e2f3ae1907be6894941 370 Gene3D G3DSA:2.30.30.280 214 281 1.3E-32 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 LK04_RS11150 003e8ec525404e2f3ae1907be6894941 370 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.469 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 LK04_RS11150 003e8ec525404e2f3ae1907be6894941 370 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 6.9E-157 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 LK04_RS11150 003e8ec525404e2f3ae1907be6894941 370 Pfam PF03054 tRNA methyl transferase 7 361 1.2E-141 T 22-04-2016 LK04_RS11150 003e8ec525404e2f3ae1907be6894941 370 Gene3D G3DSA:2.40.30.10 283 364 6.5E-32 T 22-04-2016 LK04_RS11150 003e8ec525404e2f3ae1907be6894941 370 PANTHER PTHR11933:SF10 1 366 1.4E-219 T 22-04-2016 LK04_RS11150 003e8ec525404e2f3ae1907be6894941 370 SUPERFAMILY SSF52402 5 245 3.53E-56 T 22-04-2016 LK04_RS11150 003e8ec525404e2f3ae1907be6894941 370 Gene3D G3DSA:3.40.50.620 4 212 8.1E-98 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS11150 003e8ec525404e2f3ae1907be6894941 370 PANTHER PTHR11933 1 366 1.4E-219 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 SUPERFAMILY SSF56954 3 27 5.36E-97 T 22-04-2016 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 SUPERFAMILY SSF56954 56 464 5.36E-97 T 22-04-2016 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 PANTHER PTHR30203:SF15 1 464 9.6E-147 T 22-04-2016 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 Gene3D G3DSA:1.20.1600.10 351 465 2.3E-85 T 22-04-2016 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 Gene3D G3DSA:1.20.1600.10 141 313 2.3E-85 T 22-04-2016 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 Gene3D G3DSA:1.20.1600.10 54 91 2.3E-85 T 22-04-2016 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 Pfam PF02321 Outer membrane efflux protein 66 253 6.9E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 Pfam PF02321 Outer membrane efflux protein 282 462 2.9E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 Gene3D G3DSA:2.20.200.10 314 349 2.0E-19 T 22-04-2016 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 Gene3D G3DSA:2.20.200.10 101 140 2.0E-19 T 22-04-2016 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 PANTHER PTHR30203 1 464 9.6E-147 T 22-04-2016 LK04_RS09150 e7a4bb3c4dfef0ae3e49e02e979b139a 474 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 464 5.3E-110 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LK04_RS19605 69611c5e1d054e06c987a7389de33e6b 149 SUPERFAMILY SSF56235 1 145 2.44E-45 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS19605 69611c5e1d054e06c987a7389de33e6b 149 Gene3D G3DSA:3.60.20.10 1 145 4.9E-71 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS19605 69611c5e1d054e06c987a7389de33e6b 149 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 1 145 1.7E-72 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 LK04_RS19605 69611c5e1d054e06c987a7389de33e6b 149 Pfam PF00227 Proteasome subunit 2 142 6.5E-15 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 LK04_RS19605 69611c5e1d054e06c987a7389de33e6b 149 PANTHER PTHR32194 1 145 3.1E-103 T 22-04-2016 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PANTHER PTHR13697 1 313 3.8E-29 T 22-04-2016 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 Gene3D G3DSA:3.40.50.450 1 208 1.8E-42 T 22-04-2016 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PIRSF PIRSF000532 1 326 6.2E-61 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 116 133 4.52E-34 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 244 266 4.52E-34 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 152 4.52E-34 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 4.52E-34 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 155 171 4.52E-34 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 173 190 4.52E-34 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 89 105 4.52E-34 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 208 220 4.52E-34 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 Pfam PF00365 Phosphofructokinase 2 279 2.4E-55 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 SUPERFAMILY SSF53784 1 323 2.49E-67 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 LK04_RS09515 c910163db4540b6d4619515c1ba5ed7d 326 PANTHER PTHR13697:SF2 1 313 3.8E-29 T 22-04-2016 LK04_RS18095 cdfbb63037bd4c67d46c06937612ed43 246 Gene3D G3DSA:3.40.50.10090 5 117 1.1E-10 T 22-04-2016 LK04_RS18095 cdfbb63037bd4c67d46c06937612ed43 246 Gene3D G3DSA:3.40.50.10090 123 245 4.0E-9 T 22-04-2016 LK04_RS18095 cdfbb63037bd4c67d46c06937612ed43 246 PANTHER PTHR38042:SF1 1 246 9.8E-73 T 22-04-2016 LK04_RS18095 cdfbb63037bd4c67d46c06937612ed43 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 13 242 4.1E-37 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18095 cdfbb63037bd4c67d46c06937612ed43 246 SUPERFAMILY SSF69618 1 245 2.22E-52 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS18095 cdfbb63037bd4c67d46c06937612ed43 246 PANTHER PTHR38042 1 246 9.8E-73 T 22-04-2016 LK04_RS02995 d4e1976e51a38067c139edb654670a10 243 SUPERFAMILY SSF46689 7 71 1.43E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02995 d4e1976e51a38067c139edb654670a10 243 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 66 8.5E-15 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LK04_RS02995 d4e1976e51a38067c139edb654670a10 243 SUPERFAMILY SSF53697 89 230 2.49E-29 T 22-04-2016 LK04_RS02995 d4e1976e51a38067c139edb654670a10 243 PANTHER PTHR10937:SF9 5 235 2.8E-45 T 22-04-2016 LK04_RS02995 d4e1976e51a38067c139edb654670a10 243 PANTHER PTHR10937 5 235 2.8E-45 T 22-04-2016 LK04_RS02995 d4e1976e51a38067c139edb654670a10 243 Pfam PF01380 SIS domain 107 211 2.0E-17 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS02995 d4e1976e51a38067c139edb654670a10 243 Gene3D G3DSA:1.10.10.10 7 58 3.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02995 d4e1976e51a38067c139edb654670a10 243 Gene3D G3DSA:3.40.50.10490 59 230 1.3E-29 T 22-04-2016 LK04_RS02380 72fac45e89b416d03fba132b50179909 840 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 318 328 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site LK04_RS02380 72fac45e89b416d03fba132b50179909 840 PANTHER PTHR30451 3 838 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LK04_RS02380 72fac45e89b416d03fba132b50179909 840 Pfam PF13954 PapC N-terminal domain 37 181 6.3E-41 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 LK04_RS02380 72fac45e89b416d03fba132b50179909 840 Pfam PF00577 Outer membrane usher protein 200 750 1.7E-180 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LK04_RS02380 72fac45e89b416d03fba132b50179909 840 SUPERFAMILY SSF141729 35 156 1.57E-33 T 22-04-2016 LK04_RS02380 72fac45e89b416d03fba132b50179909 840 Pfam PF13953 PapC C-terminal domain 761 818 1.0E-15 T 22-04-2016 IPR025949 PapC-like, C-terminal domain LK04_RS02380 72fac45e89b416d03fba132b50179909 840 PANTHER PTHR30451:SF10 3 838 0.0 T 22-04-2016 LK04_RS03525 100127af29d7add8329630e686bba61f 372 Gene3D G3DSA:3.10.350.10 117 161 3.4E-10 T 22-04-2016 IPR018392 LysM domain LK04_RS03525 100127af29d7add8329630e686bba61f 372 SUPERFAMILY SSF51261 119 369 2.46E-51 T 22-04-2016 IPR011055 Duplicated hybrid motif LK04_RS03525 100127af29d7add8329630e686bba61f 372 Pfam PF01551 Peptidase family M23 272 365 4.0E-32 T 22-04-2016 IPR016047 Peptidase M23 LK04_RS03525 100127af29d7add8329630e686bba61f 372 PANTHER PTHR21666:SF222 222 370 8.0E-61 T 22-04-2016 LK04_RS03525 100127af29d7add8329630e686bba61f 372 Gene3D G3DSA:2.70.70.10 235 370 2.1E-42 T 22-04-2016 LK04_RS03525 100127af29d7add8329630e686bba61f 372 Pfam PF01476 LysM domain 119 161 1.6E-8 T 22-04-2016 IPR018392 LysM domain LK04_RS03525 100127af29d7add8329630e686bba61f 372 PANTHER PTHR21666 222 370 8.0E-61 T 22-04-2016 LK04_RS03525 100127af29d7add8329630e686bba61f 372 SMART SM00257 118 162 2.2E-9 T 22-04-2016 IPR018392 LysM domain LK04_RS12905 81d07e16aeeb0595f5b547f891e6df01 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 330 54.106 T 22-04-2016 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 LK04_RS12905 81d07e16aeeb0595f5b547f891e6df01 331 Gene3D G3DSA:2.130.10.10 4 327 3.8E-79 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LK04_RS12905 81d07e16aeeb0595f5b547f891e6df01 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 7 326 2.8E-84 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 LK04_RS12905 81d07e16aeeb0595f5b547f891e6df01 331 PANTHER PTHR30344:SF1 6 331 4.3E-91 T 22-04-2016 LK04_RS12905 81d07e16aeeb0595f5b547f891e6df01 331 SUPERFAMILY SSF50974 26 328 5.1E-48 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal LK04_RS12905 81d07e16aeeb0595f5b547f891e6df01 331 PANTHER PTHR30344 6 331 4.3E-91 T 22-04-2016 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 7.1E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 7.1E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 7.1E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 1.3E-126 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 PIRSF PIRSF500176 2 332 6.6E-114 T 22-04-2016 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 PANTHER PTHR11707 1 337 1.2E-253 T 22-04-2016 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 Gene3D G3DSA:3.40.50.1170 4 197 1.9E-78 T 22-04-2016 IPR027474 L-asparaginase, N-terminal LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 PANTHER PTHR11707:SF31 1 337 1.2E-253 T 22-04-2016 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 SUPERFAMILY SSF53774 3 335 4.06E-109 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 Gene3D G3DSA:3.40.50.40 211 335 3.6E-49 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 Pfam PF00710 Asparaginase, N-terminal 5 188 2.6E-65 T 22-04-2016 IPR027474 L-asparaginase, N-terminal LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 PIRSF PIRSF001220 1 334 2.2E-95 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LK04_RS08000 e1e2be4f1fe2fcf7c65a5c5050296d3e 337 SMART SM00870 5 323 4.5E-134 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LK04_RS00930 3574d03f560ff2ea1d71e419743f7510 179 SUPERFAMILY SSF55282 4 179 6.12E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain LK04_RS00930 3574d03f560ff2ea1d71e419743f7510 179 PANTHER PTHR11994 1 178 7.3E-104 T 22-04-2016 LK04_RS00930 3574d03f560ff2ea1d71e419743f7510 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 8.2E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal LK04_RS00930 3574d03f560ff2ea1d71e419743f7510 179 Pfam PF00281 Ribosomal protein L5 24 80 9.4E-29 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal LK04_RS00930 3574d03f560ff2ea1d71e419743f7510 179 Gene3D G3DSA:3.30.1440.10 2 179 1.9E-80 T 22-04-2016 IPR022803 Ribosomal protein L5 domain LK04_RS00930 3574d03f560ff2ea1d71e419743f7510 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.747 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00930 3574d03f560ff2ea1d71e419743f7510 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00930 3574d03f560ff2ea1d71e419743f7510 179 PIRSF PIRSF002161 1 179 4.1E-66 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 LK04_RS14775 f9cfd8e8add36d938e7fa987bb6e4d3d 244 Pfam PF08241 Methyltransferase domain 70 125 8.3E-10 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LK04_RS14775 f9cfd8e8add36d938e7fa987bb6e4d3d 244 Gene3D G3DSA:3.40.50.150 77 183 9.9E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS14775 f9cfd8e8add36d938e7fa987bb6e4d3d 244 PANTHER PTHR10108:SF836 77 219 9.2E-68 T 22-04-2016 LK04_RS14775 f9cfd8e8add36d938e7fa987bb6e4d3d 244 SUPERFAMILY SSF53335 77 184 1.82E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS14775 f9cfd8e8add36d938e7fa987bb6e4d3d 244 PANTHER PTHR10108 77 219 9.2E-68 T 22-04-2016 LK04_RS02130 9da150704e8caee9c5e81c4efffaaf9e 811 Pfam PF13953 PapC C-terminal domain 714 772 3.2E-7 T 22-04-2016 IPR025949 PapC-like, C-terminal domain LK04_RS02130 9da150704e8caee9c5e81c4efffaaf9e 811 PANTHER PTHR30451 33 792 1.4E-215 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LK04_RS02130 9da150704e8caee9c5e81c4efffaaf9e 811 PANTHER PTHR30451:SF5 33 792 1.4E-215 T 22-04-2016 LK04_RS02130 9da150704e8caee9c5e81c4efffaaf9e 811 Pfam PF00577 Outer membrane usher protein 228 683 5.4E-32 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LK04_RS04120 69313bd52bd9205a84d214d2d09b82d2 422 SUPERFAMILY SSF63520 204 329 1.57E-12 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS04120 69313bd52bd9205a84d214d2d09b82d2 422 Pfam PF00874 PRD domain 237 325 5.6E-10 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS04120 69313bd52bd9205a84d214d2d09b82d2 422 Gene3D G3DSA:1.10.1790.10 229 329 1.1E-11 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS16045 8dac9d5d80893e56ca81edfdc9d40c77 464 Gene3D G3DSA:1.20.1250.20 34 240 2.2E-24 T 22-04-2016 LK04_RS16045 8dac9d5d80893e56ca81edfdc9d40c77 464 Gene3D G3DSA:1.20.1250.20 266 455 2.0E-14 T 22-04-2016 LK04_RS16045 8dac9d5d80893e56ca81edfdc9d40c77 464 PANTHER PTHR23508:SF6 33 463 1.3E-129 T 22-04-2016 LK04_RS16045 8dac9d5d80893e56ca81edfdc9d40c77 464 PANTHER PTHR23508 33 463 1.3E-129 T 22-04-2016 LK04_RS16045 8dac9d5d80893e56ca81edfdc9d40c77 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 324 339 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS16045 8dac9d5d80893e56ca81edfdc9d40c77 464 Pfam PF00083 Sugar (and other) transporter 78 458 2.7E-29 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS16045 8dac9d5d80893e56ca81edfdc9d40c77 464 SUPERFAMILY SSF103473 18 458 6.54E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS19240 62165ddb621d5bdcbbde2f7ac3f247a8 559 Pfam PF05170 AsmA family 2 542 1.7E-17 T 22-04-2016 IPR007844 AsmA LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 PANTHER PTHR10055 2 334 1.1E-187 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 1.5E-117 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 PANTHER PTHR10055:SF10 2 334 1.1E-187 T 22-04-2016 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 Gene3D G3DSA:3.40.50.620 4 205 1.8E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 1.2E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 1.2E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 1.2E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.2E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 Gene3D G3DSA:1.10.240.10 206 324 6.2E-20 T 22-04-2016 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.361 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 SUPERFAMILY SSF52374 5 330 3.66E-97 T 22-04-2016 LK04_RS00665 53a879ab95280628fc7fb6035a065358 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 1.1E-85 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS19420 136afbd905110a325cfc8e27559c329b 358 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 14 356 2.8E-146 T 22-04-2016 IPR011916 Lipopolysaccharide heptosyltransferase III, putative KEGG: 00231+2.-.-.-|UniPathway: UPA00958 LK04_RS19420 136afbd905110a325cfc8e27559c329b 358 Gene3D G3DSA:3.40.50.2000 12 167 4.3E-46 T 22-04-2016 LK04_RS19420 136afbd905110a325cfc8e27559c329b 358 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 86 326 1.0E-52 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 LK04_RS19420 136afbd905110a325cfc8e27559c329b 358 SUPERFAMILY SSF53756 12 357 3.77E-91 T 22-04-2016 LK04_RS19420 136afbd905110a325cfc8e27559c329b 358 Gene3D G3DSA:3.40.50.2000 185 357 2.5E-53 T 22-04-2016 LK04_RS19420 136afbd905110a325cfc8e27559c329b 358 PANTHER PTHR30160:SF1 11 333 6.9E-87 T 22-04-2016 LK04_RS19420 136afbd905110a325cfc8e27559c329b 358 PANTHER PTHR30160 11 333 6.9E-87 T 22-04-2016 LK04_RS12060 442cbaf9e2bfacd5037350a71f6e219a 752 SMART SM00849 506 687 2.1E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS12060 442cbaf9e2bfacd5037350a71f6e219a 752 SUPERFAMILY SSF56281 494 740 3.52E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS12060 442cbaf9e2bfacd5037350a71f6e219a 752 Gene3D G3DSA:3.60.15.10 492 701 4.2E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS12060 442cbaf9e2bfacd5037350a71f6e219a 752 PANTHER PTHR30619:SF2 1 747 7.4E-187 T 22-04-2016 LK04_RS12060 442cbaf9e2bfacd5037350a71f6e219a 752 PANTHER PTHR30619 1 747 7.4E-187 T 22-04-2016 LK04_RS12060 442cbaf9e2bfacd5037350a71f6e219a 752 Pfam PF13567 Domain of unknown function (DUF4131) 16 165 1.6E-8 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 LK04_RS12060 442cbaf9e2bfacd5037350a71f6e219a 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 68 716 1.4E-171 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 LK04_RS12060 442cbaf9e2bfacd5037350a71f6e219a 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 224 407 3.5E-37 T 22-04-2016 IPR004477 ComEC/Rec2-related protein LK04_RS12060 442cbaf9e2bfacd5037350a71f6e219a 752 Pfam PF03772 Competence protein 203 466 8.8E-54 T 22-04-2016 IPR004477 ComEC/Rec2-related protein LK04_RS12060 442cbaf9e2bfacd5037350a71f6e219a 752 Pfam PF00753 Metallo-beta-lactamase superfamily 505 668 2.5E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS10950 015650c2ae285cd2a6c3dbc5074435a2 294 PANTHER PTHR32322:SF9 4 294 4.5E-46 T 22-04-2016 LK04_RS10950 015650c2ae285cd2a6c3dbc5074435a2 294 SUPERFAMILY SSF103481 39 132 1.57E-14 T 22-04-2016 LK04_RS10950 015650c2ae285cd2a6c3dbc5074435a2 294 SUPERFAMILY SSF103481 199 276 2.35E-11 T 22-04-2016 LK04_RS10950 015650c2ae285cd2a6c3dbc5074435a2 294 PANTHER PTHR32322 4 294 4.5E-46 T 22-04-2016 LK04_RS10950 015650c2ae285cd2a6c3dbc5074435a2 294 Pfam PF00892 EamA-like transporter family 7 130 1.7E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS10950 015650c2ae285cd2a6c3dbc5074435a2 294 Pfam PF00892 EamA-like transporter family 139 276 1.1E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS08925 f6d64a968b363590057b677c521f43aa 183 PANTHER PTHR13256:SF10 1 179 6.7E-28 T 22-04-2016 LK04_RS08925 f6d64a968b363590057b677c521f43aa 183 SUPERFAMILY SSF55729 5 172 1.01E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS08925 f6d64a968b363590057b677c521f43aa 183 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 1.1E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS08925 f6d64a968b363590057b677c521f43aa 183 Gene3D G3DSA:3.40.630.30 7 177 2.2E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS08925 f6d64a968b363590057b677c521f43aa 183 PANTHER PTHR13256 1 179 6.7E-28 T 22-04-2016 LK04_RS16975 f406a58dfd1294a469347f8d4cc87b86 446 SUPERFAMILY SSF53850 35 441 4.26E-64 T 22-04-2016 LK04_RS16975 f406a58dfd1294a469347f8d4cc87b86 446 PANTHER PTHR30061:SF1 1 442 2.7E-55 T 22-04-2016 LK04_RS16975 f406a58dfd1294a469347f8d4cc87b86 446 Gene3D G3DSA:3.40.190.10 164 369 1.2E-35 T 22-04-2016 LK04_RS16975 f406a58dfd1294a469347f8d4cc87b86 446 PANTHER PTHR30061 1 442 2.7E-55 T 22-04-2016 LK04_RS16975 f406a58dfd1294a469347f8d4cc87b86 446 Pfam PF13416 Bacterial extracellular solute-binding protein 58 371 5.5E-35 T 22-04-2016 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.2E-45 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 SUPERFAMILY SSF55973 3 109 8.63E-48 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 Gene3D G3DSA:3.30.300.10 136 233 1.2E-43 T 22-04-2016 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.541 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 Gene3D G3DSA:3.30.300.10 244 381 4.9E-72 T 22-04-2016 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 SUPERFAMILY SSF55973 233 381 3.22E-71 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 PIRSF PIRSF000497 1 382 1.6E-175 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 Gene3D G3DSA:3.30.300.10 11 135 9.6E-51 T 22-04-2016 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 4.1E-199 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 SUPERFAMILY SSF55973 111 232 3.22E-51 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 PANTHER PTHR11964 1 376 5.9E-289 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 5.8E-70 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS02760 6ee054e899e4f99e87cb7e7add4e8324 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.6E-43 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LK04_RS01975 c3a493eede50f396fc86132b5b980232 230 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 230 37.07 T 22-04-2016 IPR009576 Biofilm formation YgiB LK04_RS01975 c3a493eede50f396fc86132b5b980232 230 Pfam PF06693 Protein of unknown function (DUF1190) 41 209 5.1E-58 T 22-04-2016 IPR009576 Biofilm formation YgiB LK04_RS03415 c6b15de9dd5b6797c803df1e9980fd1b 268 SUPERFAMILY SSF101386 2 105 7.85E-27 T 22-04-2016 LK04_RS03415 c6b15de9dd5b6797c803df1e9980fd1b 268 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 7.6E-115 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG LK04_RS03415 c6b15de9dd5b6797c803df1e9980fd1b 268 Gene3D G3DSA:1.10.287.1080 19 74 2.2E-7 T 22-04-2016 LK04_RS03415 c6b15de9dd5b6797c803df1e9980fd1b 268 Gene3D G3DSA:1.10.287.1080 131 221 2.1E-13 T 22-04-2016 LK04_RS03415 c6b15de9dd5b6797c803df1e9980fd1b 268 SUPERFAMILY SSF101386 135 236 2.8E-24 T 22-04-2016 LK04_RS03415 c6b15de9dd5b6797c803df1e9980fd1b 268 PANTHER PTHR30522 1 263 1.6E-131 T 22-04-2016 LK04_RS03415 c6b15de9dd5b6797c803df1e9980fd1b 268 PANTHER PTHR30522:SF0 1 263 1.6E-131 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG LK04_RS03415 c6b15de9dd5b6797c803df1e9980fd1b 268 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 167 229 1.2E-8 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LK04_RS03415 c6b15de9dd5b6797c803df1e9980fd1b 268 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 3.2E-27 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 PIRSF PIRSF000521 30 424 2.5E-28 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 Gene3D G3DSA:3.90.1150.10 3 62 3.6E-62 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 Gene3D G3DSA:3.90.1150.10 333 423 3.6E-62 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 SUPERFAMILY SSF53383 4 423 1.21E-131 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 422 7.9E-182 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 Pfam PF00202 Aminotransferase class-III 27 422 3.9E-127 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 425 50.025 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 PANTHER PTHR11986:SF8 3 430 8.7E-208 T 22-04-2016 LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 Gene3D G3DSA:3.40.640.10 63 330 1.0E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS12895 7f5ddd28f699a1bff8bc8ebc8d3896b6 430 PANTHER PTHR11986 3 430 8.7E-208 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LK04_RS16625 71ea10a6c7f2955607796a59748d724a 241 SUPERFAMILY SSF52540 4 236 1.27E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16625 71ea10a6c7f2955607796a59748d724a 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 2.8E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LK04_RS16625 71ea10a6c7f2955607796a59748d724a 241 SMART SM00382 28 231 1.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS16625 71ea10a6c7f2955607796a59748d724a 241 Pfam PF00005 ABC transporter 20 166 1.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS16625 71ea10a6c7f2955607796a59748d724a 241 Gene3D G3DSA:3.40.50.300 4 235 8.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16625 71ea10a6c7f2955607796a59748d724a 241 PANTHER PTHR24220 5 238 3.2E-150 T 22-04-2016 LK04_RS16625 71ea10a6c7f2955607796a59748d724a 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS16625 71ea10a6c7f2955607796a59748d724a 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 8.7E-122 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 LK04_RS16625 71ea10a6c7f2955607796a59748d724a 241 PANTHER PTHR24220:SF497 5 238 3.2E-150 T 22-04-2016 LK04_RS12870 4c4f18ef5625ff6adf3db7f3f954be1d 238 SMART SM00382 26 216 3.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12870 4c4f18ef5625ff6adf3db7f3f954be1d 238 SUPERFAMILY SSF52540 2 226 1.23E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12870 4c4f18ef5625ff6adf3db7f3f954be1d 238 PANTHER PTHR24220:SF404 3 228 6.9E-95 T 22-04-2016 LK04_RS12870 4c4f18ef5625ff6adf3db7f3f954be1d 238 PANTHER PTHR24220 3 228 6.9E-95 T 22-04-2016 LK04_RS12870 4c4f18ef5625ff6adf3db7f3f954be1d 238 Gene3D G3DSA:3.40.50.300 1 226 1.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12870 4c4f18ef5625ff6adf3db7f3f954be1d 238 Pfam PF00005 ABC transporter 19 166 1.1E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 228 3.4E-95 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 PANTHER PTHR24423 594 879 2.4E-129 T 22-04-2016 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 PANTHER PTHR24423 22 195 2.4E-129 T 22-04-2016 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 Gene3D G3DSA:1.10.287.130 655 723 3.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 SUPERFAMILY SSF52402 251 350 7.2E-8 T 22-04-2016 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 Pfam PF13493 Domain of unknown function (DUF4118) 400 504 8.8E-28 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 878 3.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 859 3.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 808 822 3.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 826 836 3.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 771 880 1.6E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 Gene3D G3DSA:1.20.120.620 395 499 5.7E-36 T 22-04-2016 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 SUPERFAMILY SSF55781 506 658 3.92E-5 T 22-04-2016 IPR029016 GAF domain-like LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 PANTHER PTHR24423:SF562 594 879 2.4E-129 T 22-04-2016 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 PANTHER PTHR24423:SF562 22 195 2.4E-129 T 22-04-2016 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 SMART SM00387 771 881 6.5E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 Pfam PF00512 His Kinase A (phospho-acceptor) domain 661 727 3.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 SMART SM00388 660 727 8.9E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 SUPERFAMILY SSF47384 654 728 1.26E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 Gene3D G3DSA:3.30.565.10 729 884 1.6E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 SUPERFAMILY SSF55874 717 882 4.45E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 Gene3D G3DSA:3.40.50.300 20 227 5.2E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00215 3be982f88c46b2e679f626ff775cfdaf 891 Gene3D G3DSA:3.40.50.620 242 350 3.5E-8 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS02485 65cb69a8dba20afd693c10b2b7fa1a50 346 SUPERFAMILY SSF111369 47 102 7.85E-8 T 22-04-2016 LK04_RS02485 65cb69a8dba20afd693c10b2b7fa1a50 346 PANTHER PTHR30386:SF7 1 346 4.8E-93 T 22-04-2016 LK04_RS02485 65cb69a8dba20afd693c10b2b7fa1a50 346 SUPERFAMILY SSF111369 185 279 1.03E-14 T 22-04-2016 LK04_RS02485 65cb69a8dba20afd693c10b2b7fa1a50 346 PANTHER PTHR30386 1 346 4.8E-93 T 22-04-2016 LK04_RS02485 65cb69a8dba20afd693c10b2b7fa1a50 346 Gene3D G3DSA:2.40.50.100 49 80 8.3E-19 T 22-04-2016 LK04_RS02485 65cb69a8dba20afd693c10b2b7fa1a50 346 Gene3D G3DSA:2.40.50.100 211 245 8.3E-19 T 22-04-2016 LK04_RS02485 65cb69a8dba20afd693c10b2b7fa1a50 346 Pfam PF13533 Biotin-lipoyl like 49 94 5.1E-14 T 22-04-2016 LK04_RS02485 65cb69a8dba20afd693c10b2b7fa1a50 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 155 290 8.7E-19 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS12175 9993361b2af5a54ae706d0cb850a5dc8 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 9.8E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 LK04_RS12175 9993361b2af5a54ae706d0cb850a5dc8 106 SUPERFAMILY SSF54736 21 105 3.98E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LK04_RS12175 9993361b2af5a54ae706d0cb850a5dc8 106 PANTHER PTHR33473 1 106 9.8E-46 T 22-04-2016 LK04_RS12175 9993361b2af5a54ae706d0cb850a5dc8 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 2 101 28.223 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS LK04_RS12175 9993361b2af5a54ae706d0cb850a5dc8 106 Gene3D G3DSA:3.30.1390.10 4 106 4.6E-44 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LK04_RS19555 803e73570d7a458e9b8f74aa4cce1927 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LK04_RS19555 803e73570d7a458e9b8f74aa4cce1927 255 SUPERFAMILY SSF51351 1 249 7.59E-92 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LK04_RS19555 803e73570d7a458e9b8f74aa4cce1927 255 Pfam PF00121 Triosephosphate isomerase 5 246 8.4E-94 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LK04_RS19555 803e73570d7a458e9b8f74aa4cce1927 255 Gene3D G3DSA:3.20.20.70 1 250 2.2E-103 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS19555 803e73570d7a458e9b8f74aa4cce1927 255 PANTHER PTHR21139 1 255 6.0E-134 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LK04_RS19555 803e73570d7a458e9b8f74aa4cce1927 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.816 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LK04_RS19555 803e73570d7a458e9b8f74aa4cce1927 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 2.3E-98 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LK04_RS16750 41795b82bf6a420570b99735661a3552 97 SMART SM00883 2 95 3.5E-48 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LK04_RS16750 41795b82bf6a420570b99735661a3552 97 PANTHER PTHR10772 1 96 5.8E-38 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LK04_RS16750 41795b82bf6a420570b99735661a3552 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 6.2E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LK04_RS16750 41795b82bf6a420570b99735661a3552 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 LK04_RS16750 41795b82bf6a420570b99735661a3552 97 SUPERFAMILY SSF50129 1 96 5.65E-31 T 22-04-2016 IPR011032 GroES-like LK04_RS16750 41795b82bf6a420570b99735661a3552 97 Gene3D G3DSA:2.30.33.40 1 96 4.0E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LK04_RS16750 41795b82bf6a420570b99735661a3552 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.807 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LK04_RS16750 41795b82bf6a420570b99735661a3552 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LK04_RS16750 41795b82bf6a420570b99735661a3552 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.9E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LK04_RS16750 41795b82bf6a420570b99735661a3552 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.9E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LK04_RS16750 41795b82bf6a420570b99735661a3552 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.9E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LK04_RS11340 d87ed14767d4a82f8cadb71a59afbf24 318 SUPERFAMILY SSF55120 95 314 7.84E-65 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS11340 d87ed14767d4a82f8cadb71a59afbf24 318 SMART SM00363 20 79 4.5E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS11340 d87ed14767d4a82f8cadb71a59afbf24 318 Gene3D G3DSA:3.10.290.10 20 68 3.4E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS11340 d87ed14767d4a82f8cadb71a59afbf24 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS11340 d87ed14767d4a82f8cadb71a59afbf24 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 2.7E-93 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS11340 d87ed14767d4a82f8cadb71a59afbf24 318 PANTHER PTHR11079:SF84 1 316 1.7E-160 T 22-04-2016 LK04_RS11340 d87ed14767d4a82f8cadb71a59afbf24 318 Pfam PF00849 RNA pseudouridylate synthase 101 248 3.7E-29 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LK04_RS11340 d87ed14767d4a82f8cadb71a59afbf24 318 PANTHER PTHR11079 1 316 1.7E-160 T 22-04-2016 LK04_RS11340 d87ed14767d4a82f8cadb71a59afbf24 318 Pfam PF01479 S4 domain 20 66 4.0E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS11340 d87ed14767d4a82f8cadb71a59afbf24 318 SUPERFAMILY SSF55174 19 70 1.62E-8 T 22-04-2016 LK04_RS10360 6ba4a9a4083d076fd05ad4ceabb02d76 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS10360 6ba4a9a4083d076fd05ad4ceabb02d76 248 SUPERFAMILY SSF52540 2 231 3.59E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10360 6ba4a9a4083d076fd05ad4ceabb02d76 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 1.0E-114 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 LK04_RS10360 6ba4a9a4083d076fd05ad4ceabb02d76 248 SMART SM00382 26 223 7.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS10360 6ba4a9a4083d076fd05ad4ceabb02d76 248 PANTHER PTHR24220:SF85 3 248 2.8E-128 T 22-04-2016 LK04_RS10360 6ba4a9a4083d076fd05ad4ceabb02d76 248 Gene3D G3DSA:3.40.50.300 1 235 1.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10360 6ba4a9a4083d076fd05ad4ceabb02d76 248 Pfam PF00005 ABC transporter 17 172 3.5E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS10360 6ba4a9a4083d076fd05ad4ceabb02d76 248 PANTHER PTHR24220 3 248 2.8E-128 T 22-04-2016 LK04_RS16490 31d7ca7a5b22536164065b787bff8649 265 PANTHER PTHR24220 9 263 6.1E-154 T 22-04-2016 LK04_RS16490 31d7ca7a5b22536164065b787bff8649 265 Gene3D G3DSA:3.40.50.300 12 240 2.9E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16490 31d7ca7a5b22536164065b787bff8649 265 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS16490 31d7ca7a5b22536164065b787bff8649 265 Pfam PF00005 ABC transporter 24 171 7.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS16490 31d7ca7a5b22536164065b787bff8649 265 PANTHER PTHR24220:SF438 9 263 6.1E-154 T 22-04-2016 LK04_RS16490 31d7ca7a5b22536164065b787bff8649 265 SMART SM00382 32 229 1.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS16490 31d7ca7a5b22536164065b787bff8649 265 SUPERFAMILY SSF52540 9 233 1.59E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04595 050a7a040b8edb325a65121d78deb363 141 PIRSF PIRSF037663 1 132 1.4E-10 T 22-04-2016 IPR017255 Acetyltransferase, GNAT, predicted LK04_RS04595 050a7a040b8edb325a65121d78deb363 141 Pfam PF00583 Acetyltransferase (GNAT) family 48 124 7.2E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS04595 050a7a040b8edb325a65121d78deb363 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 47.715 T 22-04-2016 IPR023072 Acetyltransferase, YpeA GO:0016747 LK04_RS04595 050a7a040b8edb325a65121d78deb363 141 PANTHER PTHR23091 1 129 1.4E-29 T 22-04-2016 LK04_RS04595 050a7a040b8edb325a65121d78deb363 141 Gene3D G3DSA:3.40.630.30 1 121 6.6E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS04595 050a7a040b8edb325a65121d78deb363 141 PANTHER PTHR23091:SF274 1 129 1.4E-29 T 22-04-2016 LK04_RS04595 050a7a040b8edb325a65121d78deb363 141 SUPERFAMILY SSF55729 1 129 4.67E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS09920 e957836e99dd8e857e8414f74654ed0e 231 Pfam PF06992 Replication protein P 14 208 2.7E-52 T 22-04-2016 IPR009731 Replication P GO:0006270 LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 PANTHER PTHR24220:SF416 7 379 5.0E-171 T 22-04-2016 LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 PANTHER PTHR24220 7 379 5.0E-171 T 22-04-2016 LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 Pfam PF00005 ABC transporter 270 424 3.0E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 Pfam PF00005 ABC transporter 21 170 1.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 SMART SM00382 278 473 3.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 SMART SM00382 30 218 2.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 SUPERFAMILY SSF52540 5 230 1.49E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 Gene3D G3DSA:3.40.50.300 5 234 7.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 Gene3D G3DSA:3.40.50.300 267 485 2.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06520 c9c6b0cc523f7baf05c6adb2daa8b80f 494 SUPERFAMILY SSF52540 260 483 4.14E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07425 4fb5c5b8826ea3fd65de5e05978d300c 261 Pfam PF00950 ABC 3 transport family 2 257 1.3E-86 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 LK04_RS07425 4fb5c5b8826ea3fd65de5e05978d300c 261 PANTHER PTHR30477 9 259 1.8E-89 T 22-04-2016 LK04_RS07425 4fb5c5b8826ea3fd65de5e05978d300c 261 SUPERFAMILY SSF81345 3 257 1.44E-41 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS07425 4fb5c5b8826ea3fd65de5e05978d300c 261 PANTHER PTHR30477:SF0 9 259 1.8E-89 T 22-04-2016 LK04_RS07425 4fb5c5b8826ea3fd65de5e05978d300c 261 Gene3D G3DSA:1.10.3470.10 58 258 1.5E-12 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS10290 a52801125405fcd76ce701186fd10e85 303 Pfam PF03466 LysR substrate binding domain 88 289 1.6E-30 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS10290 a52801125405fcd76ce701186fd10e85 303 PANTHER PTHR30126:SF18 1 302 2.8E-164 T 22-04-2016 LK04_RS10290 a52801125405fcd76ce701186fd10e85 303 Gene3D G3DSA:3.40.190.10 172 256 2.7E-9 T 22-04-2016 LK04_RS10290 a52801125405fcd76ce701186fd10e85 303 PANTHER PTHR30126 1 302 2.8E-164 T 22-04-2016 LK04_RS10290 a52801125405fcd76ce701186fd10e85 303 Gene3D G3DSA:3.40.190.10 89 171 2.4E-12 T 22-04-2016 LK04_RS10290 a52801125405fcd76ce701186fd10e85 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.8E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS10290 a52801125405fcd76ce701186fd10e85 303 SUPERFAMILY SSF46785 6 88 3.48E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10290 a52801125405fcd76ce701186fd10e85 303 SUPERFAMILY SSF53850 89 290 2.79E-33 T 22-04-2016 LK04_RS10290 a52801125405fcd76ce701186fd10e85 303 Gene3D G3DSA:1.10.10.10 6 88 1.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 PANTHER PTHR32494:SF5 1 417 4.6E-160 T 22-04-2016 LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 PANTHER PTHR32494 1 417 4.6E-160 T 22-04-2016 LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 SUPERFAMILY SSF53187 10 231 1.37E-78 T 22-04-2016 LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 SUPERFAMILY SSF53187 344 417 1.37E-78 T 22-04-2016 LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 Gene3D G3DSA:3.40.630.10 11 233 1.3E-101 T 22-04-2016 LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 Gene3D G3DSA:3.40.630.10 359 418 1.3E-101 T 22-04-2016 LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 Pfam PF01546 Peptidase family M20/M25/M40 85 413 2.5E-25 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 SUPERFAMILY SSF55031 221 336 3.14E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 22 416 2.6E-116 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 Gene3D G3DSA:3.30.70.360 234 336 1.3E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LK04_RS14685 ea4c2711098afed2dd7ad12ba8b78180 419 PIRSF PIRSF001235 10 419 1.2E-130 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 LK04_RS10225 1e1b9a882ccdd988bcf5d7b30ce5bd30 666 Pfam PF04632 Fusaric acid resistance protein family 21 663 7.4E-166 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 LK04_RS10225 1e1b9a882ccdd988bcf5d7b30ce5bd30 666 PANTHER PTHR30509 309 644 2.9E-131 T 22-04-2016 LK04_RS10225 1e1b9a882ccdd988bcf5d7b30ce5bd30 666 PANTHER PTHR30509 8 258 2.9E-131 T 22-04-2016 LK04_RS10225 1e1b9a882ccdd988bcf5d7b30ce5bd30 666 PANTHER PTHR30509:SF1 309 644 2.9E-131 T 22-04-2016 LK04_RS10225 1e1b9a882ccdd988bcf5d7b30ce5bd30 666 PANTHER PTHR30509:SF1 8 258 2.9E-131 T 22-04-2016 LK04_RS09370 d0fdc4b436ce7037a155242e9bc56bab 433 Gene3D G3DSA:1.20.1250.20 19 209 3.4E-48 T 22-04-2016 LK04_RS09370 d0fdc4b436ce7037a155242e9bc56bab 433 Gene3D G3DSA:1.20.1250.20 233 430 1.2E-20 T 22-04-2016 LK04_RS09370 d0fdc4b436ce7037a155242e9bc56bab 433 PANTHER PTHR11662 15 433 4.9E-220 T 22-04-2016 LK04_RS09370 d0fdc4b436ce7037a155242e9bc56bab 433 PANTHER PTHR11662:SF285 15 433 4.9E-220 T 22-04-2016 LK04_RS09370 d0fdc4b436ce7037a155242e9bc56bab 433 Pfam PF07690 Major Facilitator Superfamily 31 390 3.0E-55 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS09370 d0fdc4b436ce7037a155242e9bc56bab 433 SUPERFAMILY SSF103473 14 431 1.15E-77 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS04620 5d8147b906bbfaeb5222448af11422c4 277 Gene3D G3DSA:1.10.3720.10 19 273 1.2E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04620 5d8147b906bbfaeb5222448af11422c4 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 4.8E-111 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 LK04_RS04620 5d8147b906bbfaeb5222448af11422c4 277 PANTHER PTHR30406:SF7 4 277 1.9E-200 T 22-04-2016 LK04_RS04620 5d8147b906bbfaeb5222448af11422c4 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 9.0E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04620 5d8147b906bbfaeb5222448af11422c4 277 SUPERFAMILY SSF161098 17 266 1.2E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04620 5d8147b906bbfaeb5222448af11422c4 277 PANTHER PTHR30406 4 277 1.9E-200 T 22-04-2016 LK04_RS04620 5d8147b906bbfaeb5222448af11422c4 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 269 3.1E-110 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 LK04_RS12650 5dc8636dc81d2750c236dc31525c9ea2 243 PANTHER PTHR30177 1 241 1.9E-118 T 22-04-2016 LK04_RS12650 5dc8636dc81d2750c236dc31525c9ea2 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 236 2.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12650 5dc8636dc81d2750c236dc31525c9ea2 243 PANTHER PTHR30177:SF11 1 241 1.9E-118 T 22-04-2016 LK04_RS12650 5dc8636dc81d2750c236dc31525c9ea2 243 Gene3D G3DSA:1.10.3720.10 40 239 7.4E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12650 5dc8636dc81d2750c236dc31525c9ea2 243 SUPERFAMILY SSF161098 45 233 6.15E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03880 965a2e2ec5d7418cc2210879ad59f23d 285 SUPERFAMILY SSF161098 78 263 7.59E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03880 965a2e2ec5d7418cc2210879ad59f23d 285 Gene3D G3DSA:1.10.3720.10 77 280 3.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03880 965a2e2ec5d7418cc2210879ad59f23d 285 PANTHER PTHR30465:SF10 1 285 5.9E-100 T 22-04-2016 LK04_RS03880 965a2e2ec5d7418cc2210879ad59f23d 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 282 5.1E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03880 965a2e2ec5d7418cc2210879ad59f23d 285 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 60 2.1E-5 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS03880 965a2e2ec5d7418cc2210879ad59f23d 285 PANTHER PTHR30465 1 285 5.9E-100 T 22-04-2016 LK04_RS08930 c735f97006059736aa5c7ccd0fea7948 318 Pfam PF04198 Putative sugar-binding domain 64 317 1.1E-75 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 LK04_RS08930 c735f97006059736aa5c7ccd0fea7948 318 Gene3D G3DSA:1.10.10.10 25 57 1.6E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08930 c735f97006059736aa5c7ccd0fea7948 318 Gene3D G3DSA:3.40.50.1360 60 317 4.0E-76 T 22-04-2016 LK04_RS08930 c735f97006059736aa5c7ccd0fea7948 318 SUPERFAMILY SSF100950 67 316 1.17E-66 T 22-04-2016 LK04_RS08930 c735f97006059736aa5c7ccd0fea7948 318 PANTHER PTHR34294 2 318 4.5E-78 T 22-04-2016 LK04_RS17040 7e9442961d0bad542083e9b50ea220d0 219 Pfam PF00072 Response regulator receiver domain 3 112 7.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS17040 7e9442961d0bad542083e9b50ea220d0 219 SMART SM00448 1 112 9.3E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS17040 7e9442961d0bad542083e9b50ea220d0 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 215 1.2E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS17040 7e9442961d0bad542083e9b50ea220d0 219 SMART SM00862 145 216 1.9E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS17040 7e9442961d0bad542083e9b50ea220d0 219 SUPERFAMILY SSF46894 118 216 2.72E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS17040 7e9442961d0bad542083e9b50ea220d0 219 PANTHER PTHR26402 1 216 4.2E-83 T 22-04-2016 LK04_RS17040 7e9442961d0bad542083e9b50ea220d0 219 PANTHER PTHR26402:SF279 1 216 4.2E-83 T 22-04-2016 LK04_RS17040 7e9442961d0bad542083e9b50ea220d0 219 Gene3D G3DSA:3.40.50.2300 1 121 3.3E-34 T 22-04-2016 LK04_RS17040 7e9442961d0bad542083e9b50ea220d0 219 Gene3D G3DSA:1.10.10.10 124 216 2.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17040 7e9442961d0bad542083e9b50ea220d0 219 SUPERFAMILY SSF52172 1 118 1.57E-34 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS12730 0999cc5075793e9c3dfc10663dd6a29c 814 PANTHER PTHR30347 227 805 3.5E-122 T 22-04-2016 LK04_RS12730 0999cc5075793e9c3dfc10663dd6a29c 814 SUPERFAMILY SSF50182 633 697 3.2E-15 T 22-04-2016 IPR010920 LSM domain LK04_RS12730 0999cc5075793e9c3dfc10663dd6a29c 814 PANTHER PTHR30347:SF3 227 805 3.5E-122 T 22-04-2016 LK04_RS12730 0999cc5075793e9c3dfc10663dd6a29c 814 Gene3D G3DSA:2.30.30.60 648 696 1.8E-15 T 22-04-2016 LK04_RS12730 0999cc5075793e9c3dfc10663dd6a29c 814 Pfam PF00924 Mechanosensitive ion channel 591 787 2.4E-39 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LK04_RS12730 0999cc5075793e9c3dfc10663dd6a29c 814 SUPERFAMILY SSF82689 706 796 2.75E-12 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LK04_RS12730 0999cc5075793e9c3dfc10663dd6a29c 814 Pfam PF12607 Protein of unknown function (DUF3772) 140 201 5.0E-18 T 22-04-2016 IPR022249 Domain of unknown function DUF3772 LK04_RS12730 0999cc5075793e9c3dfc10663dd6a29c 814 SUPERFAMILY SSF82861 548 631 9.68E-12 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LK04_RS12730 0999cc5075793e9c3dfc10663dd6a29c 814 Gene3D G3DSA:3.30.70.100 716 787 6.0E-10 T 22-04-2016 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 Gene3D G3DSA:3.40.50.300 443 663 1.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 518 536 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 Gene3D G3DSA:1.10.8.60 664 753 1.8E-31 T 22-04-2016 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 Gene3D G3DSA:1.10.1780.10 1 141 3.4E-45 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 327 3.0E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 647 7.1E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 SMART SM01086 653 744 2.7E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 SUPERFAMILY SSF81923 1 141 1.26E-57 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 PANTHER PTHR11638 1 755 0.0 T 22-04-2016 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 9.5E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 PANTHER PTHR11638:SF111 1 755 0.0 T 22-04-2016 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 SUPERFAMILY SSF52540 437 742 2.34E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 562 580 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 533 551 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 609 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 491 509 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 653 733 1.6E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 Gene3D G3DSA:1.10.8.60 351 435 9.6E-31 T 22-04-2016 LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 Gene3D G3DSA:3.40.50.300 167 350 3.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 SUPERFAMILY SSF52540 169 426 7.16E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 SMART SM00382 487 654 1.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12170 90267031d4ea0a0416a5b0525ad5c09f 759 SMART SM00382 206 351 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS18500 8a77abc8d66f98f73b247e1e021e3264 177 PANTHER PTHR33795:SF1 3 176 7.4E-34 T 22-04-2016 LK04_RS18500 8a77abc8d66f98f73b247e1e021e3264 177 SUPERFAMILY SSF48295 4 61 1.46E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 LK04_RS18500 8a77abc8d66f98f73b247e1e021e3264 177 Gene3D G3DSA:1.10.10.60 65 159 1.9E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18500 8a77abc8d66f98f73b247e1e021e3264 177 PANTHER PTHR33795 3 176 7.4E-34 T 22-04-2016 LK04_RS18500 8a77abc8d66f98f73b247e1e021e3264 177 SUPERFAMILY SSF46689 63 164 1.29E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18500 8a77abc8d66f98f73b247e1e021e3264 177 Pfam PF13518 Helix-turn-helix domain 9 59 1.7E-12 T 22-04-2016 LK04_RS18500 8a77abc8d66f98f73b247e1e021e3264 177 Pfam PF13518 Helix-turn-helix domain 68 110 2.8E-6 T 22-04-2016 LK04_RS18500 8a77abc8d66f98f73b247e1e021e3264 177 Gene3D G3DSA:1.10.10.10 4 57 2.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS09640 b3dd79c716d314b1fe6225589312008d 144 PRINTS PR00117 Barnase signature 124 142 6.7E-30 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 LK04_RS09640 b3dd79c716d314b1fe6225589312008d 144 PRINTS PR00117 Barnase signature 102 121 6.7E-30 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 LK04_RS09640 b3dd79c716d314b1fe6225589312008d 144 PRINTS PR00117 Barnase signature 41 58 6.7E-30 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 LK04_RS09640 b3dd79c716d314b1fe6225589312008d 144 PRINTS PR00117 Barnase signature 81 99 6.7E-30 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 LK04_RS09640 b3dd79c716d314b1fe6225589312008d 144 PRINTS PR00117 Barnase signature 61 78 6.7E-30 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 LK04_RS09640 b3dd79c716d314b1fe6225589312008d 144 SUPERFAMILY SSF53933 38 143 5.95E-35 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 LK04_RS09640 b3dd79c716d314b1fe6225589312008d 144 Gene3D G3DSA:3.10.450.30 37 143 2.9E-42 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 LK04_RS09640 b3dd79c716d314b1fe6225589312008d 144 Pfam PF00545 ribonuclease 54 142 1.6E-23 T 22-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 LK04_RS09640 b3dd79c716d314b1fe6225589312008d 144 PIRSF PIRSF001013 4 144 9.7E-57 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 LK04_RS13890 bb9540475b29b71396b8b30015fe626f 103 Gene3D G3DSA:1.10.10.10 5 90 7.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13890 bb9540475b29b71396b8b30015fe626f 103 PANTHER PTHR10815 1 102 5.9E-48 T 22-04-2016 LK04_RS13890 bb9540475b29b71396b8b30015fe626f 103 SUPERFAMILY SSF46767 5 87 7.98E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LK04_RS13890 bb9540475b29b71396b8b30015fe626f 103 PANTHER PTHR10815:SF2 1 102 5.9E-48 T 22-04-2016 LK04_RS13890 bb9540475b29b71396b8b30015fe626f 103 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 7 86 6.4E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LK04_RS11350 9c3e6e7643d4c2a50a0f135a5854136d 320 SUPERFAMILY SSF64518 1 318 4.45E-57 T 22-04-2016 LK04_RS11350 9c3e6e7643d4c2a50a0f135a5854136d 320 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 194 8.7E-66 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 LK04_RS11350 9c3e6e7643d4c2a50a0f135a5854136d 320 PANTHER PTHR30244 1 319 6.8E-84 T 22-04-2016 LK04_RS11350 9c3e6e7643d4c2a50a0f135a5854136d 320 Gene3D G3DSA:1.20.1330.10 220 265 6.6E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LK04_RS11350 9c3e6e7643d4c2a50a0f135a5854136d 320 Gene3D G3DSA:1.20.1330.10 61 176 6.6E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LK04_RS11350 9c3e6e7643d4c2a50a0f135a5854136d 320 Pfam PF00700 Bacterial flagellin C-terminal helical region 240 316 1.0E-4 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LK04_RS11350 9c3e6e7643d4c2a50a0f135a5854136d 320 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 1.2E-23 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LK04_RS11350 9c3e6e7643d4c2a50a0f135a5854136d 320 PANTHER PTHR30244:SF5 1 319 6.8E-84 T 22-04-2016 LK04_RS07405 011b096ca520ba05e0bb693a81055cd5 247 Pfam PF01709 Transcriptional regulator 5 236 1.4E-91 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LK04_RS07405 011b096ca520ba05e0bb693a81055cd5 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.3E-102 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LK04_RS07405 011b096ca520ba05e0bb693a81055cd5 247 SUPERFAMILY SSF75625 3 246 3.92E-94 T 22-04-2016 IPR029072 YebC-like LK04_RS07405 011b096ca520ba05e0bb693a81055cd5 247 Gene3D G3DSA:1.10.10.200 1 79 1.1E-32 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like LK04_RS07405 011b096ca520ba05e0bb693a81055cd5 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.624 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LK04_RS07405 011b096ca520ba05e0bb693a81055cd5 247 Gene3D G3DSA:3.30.1270.10 82 134 1.3E-41 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 LK04_RS07405 011b096ca520ba05e0bb693a81055cd5 247 Gene3D G3DSA:3.30.1270.10 212 246 1.3E-41 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 LK04_RS07405 011b096ca520ba05e0bb693a81055cd5 247 Gene3D G3DSA:3.30.70.980 135 205 5.4E-29 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 LK04_RS07405 011b096ca520ba05e0bb693a81055cd5 247 PANTHER PTHR12532 1 241 5.3E-118 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LK04_RS04575 d3140c2b97f80e3bdf8e4e03b4c6ddfa 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS04575 d3140c2b97f80e3bdf8e4e03b4c6ddfa 316 Gene3D G3DSA:3.20.20.70 1 315 1.2E-130 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS04575 d3140c2b97f80e3bdf8e4e03b4c6ddfa 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS04575 d3140c2b97f80e3bdf8e4e03b4c6ddfa 316 TIGRFAM TIGR00874 talAB: transaldolase 2 315 8.0E-155 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS04575 d3140c2b97f80e3bdf8e4e03b4c6ddfa 316 SUPERFAMILY SSF51569 1 315 1.47E-113 T 22-04-2016 LK04_RS04575 d3140c2b97f80e3bdf8e4e03b4c6ddfa 316 Pfam PF00923 Transaldolase 13 310 5.0E-100 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS04575 d3140c2b97f80e3bdf8e4e03b4c6ddfa 316 PANTHER PTHR10683 1 316 1.8E-201 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS04575 d3140c2b97f80e3bdf8e4e03b4c6ddfa 316 PANTHER PTHR10683:SF16 1 316 1.8E-201 T 22-04-2016 LK04_RS04575 d3140c2b97f80e3bdf8e4e03b4c6ddfa 316 Hamap MF_00492 Transaldolase [tal]. 1 316 52.235 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS04055 92e8b7f4ffae514f12c082ebc3e15db1 82 PANTHER PTHR24960 1 79 2.2E-29 T 22-04-2016 LK04_RS04055 92e8b7f4ffae514f12c082ebc3e15db1 82 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS04055 92e8b7f4ffae514f12c082ebc3e15db1 82 SUPERFAMILY SSF54862 5 66 4.51E-17 T 22-04-2016 LK04_RS04055 92e8b7f4ffae514f12c082ebc3e15db1 82 Pfam PF12838 4Fe-4S dicluster domain 8 56 4.1E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LK04_RS04055 92e8b7f4ffae514f12c082ebc3e15db1 82 Gene3D G3DSA:3.30.70.20 4 72 1.3E-16 T 22-04-2016 LK04_RS04055 92e8b7f4ffae514f12c082ebc3e15db1 82 PANTHER PTHR24960:SF38 1 79 2.2E-29 T 22-04-2016 LK04_RS06405 bdb8bdf0e017e78b0471e96e8907469a 330 Gene3D G3DSA:1.10.3720.10 114 321 2.5E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06405 bdb8bdf0e017e78b0471e96e8907469a 330 PANTHER PTHR30465:SF0 9 326 2.1E-89 T 22-04-2016 LK04_RS06405 bdb8bdf0e017e78b0471e96e8907469a 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 325 2.5E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06405 bdb8bdf0e017e78b0471e96e8907469a 330 SUPERFAMILY SSF161098 114 308 3.71E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06405 bdb8bdf0e017e78b0471e96e8907469a 330 PANTHER PTHR30465 9 326 2.1E-89 T 22-04-2016 LK04_RS18715 7296405cebdb5e51a9068a9d397746cf 249 Gene3D G3DSA:3.90.470.20 108 160 4.5E-5 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS18715 7296405cebdb5e51a9068a9d397746cf 249 SUPERFAMILY SSF56214 101 157 5.36E-5 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS18715 7296405cebdb5e51a9068a9d397746cf 249 Gene3D G3DSA:3.90.470.20 33 107 1.0E-5 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 45.993 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 Gene3D G3DSA:1.10.240.10 238 321 1.8E-42 T 22-04-2016 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 7.1E-140 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 Gene3D G3DSA:3.40.50.620 3 237 1.8E-103 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 PANTHER PTHR11766 5 423 1.3E-216 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 Gene3D G3DSA:3.10.290.10 322 423 7.4E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 SUPERFAMILY SSF55174 327 423 3.66E-20 T 22-04-2016 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 5.3E-31 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 5.3E-31 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 5.3E-31 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 5.3E-31 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 SUPERFAMILY SSF52374 4 328 2.36E-108 T 22-04-2016 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 8.5E-89 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 SMART SM00363 357 419 7.2E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS10185 2c204b50a98d1adb5c8701e7ccadc6d5 424 Pfam PF01479 S4 domain 359 403 8.1E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 PANTHER PTHR13794:SF47 4 149 4.8E-304 T 22-04-2016 LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 PANTHER PTHR13794:SF47 170 428 4.8E-304 T 22-04-2016 LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 SMART SM00922 182 282 3.9E-16 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 Gene3D G3DSA:3.30.390.10 6 115 3.1E-9 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 PANTHER PTHR13794 4 149 4.8E-304 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 PANTHER PTHR13794 170 428 4.8E-304 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 3 443 5.3E-269 T 22-04-2016 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499|UniPathway: UPA00564 LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 Gene3D G3DSA:3.20.20.120 181 395 2.4E-102 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 Gene3D G3DSA:3.20.20.120 116 149 2.4E-102 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 Pfam PF13378 Enolase C-terminal domain-like 186 402 4.7E-37 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 SUPERFAMILY SSF51604 136 412 6.54E-83 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LK04_RS03380 4118ecec697eb9580ffe9d5efd74e83e 443 SUPERFAMILY SSF54826 4 134 2.6E-30 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LK04_RS06720 8f98f57371d81a804ee7138d07544422 312 PANTHER PTHR32196:SF41 1 301 6.8E-140 T 22-04-2016 LK04_RS06720 8f98f57371d81a804ee7138d07544422 312 Gene3D G3DSA:3.40.50.2300 146 306 3.0E-45 T 22-04-2016 LK04_RS06720 8f98f57371d81a804ee7138d07544422 312 Gene3D G3DSA:3.40.50.2300 28 145 1.5E-37 T 22-04-2016 LK04_RS06720 8f98f57371d81a804ee7138d07544422 312 Pfam PF13407 Periplasmic binding protein domain 29 284 3.7E-54 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS06720 8f98f57371d81a804ee7138d07544422 312 PANTHER PTHR32196 1 301 6.8E-140 T 22-04-2016 LK04_RS06720 8f98f57371d81a804ee7138d07544422 312 SUPERFAMILY SSF53822 11 306 3.53E-77 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 SUPERFAMILY SSF51011 477 546 7.73E-9 T 22-04-2016 LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 Gene3D G3DSA:3.20.20.80 8 108 1.9E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 Gene3D G3DSA:3.20.20.80 178 475 1.9E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 PANTHER PTHR10357 453 516 8.9E-236 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 PANTHER PTHR10357 1 421 8.9E-236 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 Pfam PF00128 Alpha amylase, catalytic domain 32 373 2.3E-120 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 SMART SM00642 17 416 3.7E-145 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 SUPERFAMILY SSF51445 7 474 1.99E-151 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 Pfam PF11941 Domain of unknown function (DUF3459) 460 542 5.7E-7 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 9 546 3.2E-243 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 Gene3D G3DSA:2.60.40.1180 478 545 4.9E-11 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 PANTHER PTHR10357:SF170 453 516 8.9E-236 T 22-04-2016 LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 PANTHER PTHR10357:SF170 1 421 8.9E-236 T 22-04-2016 LK04_RS19325 56c6f79beb25cc17ffe941297080542f 549 Gene3D G3DSA:3.90.400.10 109 177 2.9E-26 T 22-04-2016 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 Gene3D G3DSA:3.90.930.12 2 82 8.6E-29 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.222 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.8E-72 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 Gene3D G3DSA:3.90.930.12 83 177 9.0E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 SUPERFAMILY SSF56053 1 82 2.4E-22 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 SUPERFAMILY SSF56053 83 177 4.8E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 PANTHER PTHR11655:SF14 1 176 4.6E-86 T 22-04-2016 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 PIRSF PIRSF002162 1 177 9.5E-41 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 PANTHER PTHR11655 1 176 4.6E-86 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 Pfam PF00347 Ribosomal protein L6 90 164 4.0E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS00945 95c73d65504a03e104ae5edefc89bbee 177 Pfam PF00347 Ribosomal protein L6 11 82 2.6E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LK04_RS13865 1e0d687cff2782cab7c002fb2b5813ba 218 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS13865 1e0d687cff2782cab7c002fb2b5813ba 218 SUPERFAMILY SSF52540 3 204 1.25E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13865 1e0d687cff2782cab7c002fb2b5813ba 218 Pfam PF00005 ABC transporter 20 158 1.6E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS13865 1e0d687cff2782cab7c002fb2b5813ba 218 PANTHER PTHR24220 3 200 4.1E-51 T 22-04-2016 LK04_RS13865 1e0d687cff2782cab7c002fb2b5813ba 218 SMART SM00382 26 206 2.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS13865 1e0d687cff2782cab7c002fb2b5813ba 218 Gene3D G3DSA:3.40.50.300 3 205 1.4E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13865 1e0d687cff2782cab7c002fb2b5813ba 218 PANTHER PTHR24220:SF581 3 200 4.1E-51 T 22-04-2016 LK04_RS02825 43ac2101a4bee804d20d3b2b885543ec 424 Pfam PF05159 Capsule polysaccharide biosynthesis protein 83 389 2.0E-86 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 LK04_RS11895 c209290bbb1c45b5b12cc1a6b5766b64 427 PANTHER PTHR30462 1 422 1.3E-228 T 22-04-2016 LK04_RS11895 c209290bbb1c45b5b12cc1a6b5766b64 427 PANTHER PTHR30462:SF3 1 422 1.3E-228 T 22-04-2016 LK04_RS11895 c209290bbb1c45b5b12cc1a6b5766b64 427 Pfam PF04403 Paraquat-inducible protein A 50 200 9.3E-40 T 22-04-2016 IPR007498 Paraquat-inducible protein A LK04_RS11895 c209290bbb1c45b5b12cc1a6b5766b64 427 Pfam PF04403 Paraquat-inducible protein A 253 409 5.3E-55 T 22-04-2016 IPR007498 Paraquat-inducible protein A LK04_RS11895 c209290bbb1c45b5b12cc1a6b5766b64 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 7.3E-155 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 LK04_RS12420 56dc12fda30dc873a0199586fa56f4da 376 SUPERFAMILY SSF111369 74 169 3.01E-12 T 22-04-2016 LK04_RS12420 56dc12fda30dc873a0199586fa56f4da 376 Gene3D G3DSA:2.40.50.100 245 277 1.2E-21 T 22-04-2016 LK04_RS12420 56dc12fda30dc873a0199586fa56f4da 376 Gene3D G3DSA:2.40.50.100 75 108 1.2E-21 T 22-04-2016 LK04_RS12420 56dc12fda30dc873a0199586fa56f4da 376 Pfam PF00529 HlyD membrane-fusion protein of T1SS 60 368 4.5E-7 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS12420 56dc12fda30dc873a0199586fa56f4da 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 321 3.8E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS12420 56dc12fda30dc873a0199586fa56f4da 376 PANTHER PTHR30386 39 376 4.0E-91 T 22-04-2016 LK04_RS12420 56dc12fda30dc873a0199586fa56f4da 376 PANTHER PTHR30386:SF7 39 376 4.0E-91 T 22-04-2016 LK04_RS12420 56dc12fda30dc873a0199586fa56f4da 376 SUPERFAMILY SSF111369 186 318 2.09E-16 T 22-04-2016 LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 Gene3D G3DSA:1.10.10.10 7 76 2.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 SMART SM00345 17 75 1.2E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 Gene3D G3DSA:1.20.120.530 79 214 1.9E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 SUPERFAMILY SSF48008 83 210 1.75E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 6.5E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 SMART SM00895 85 209 4.1E-13 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 SUPERFAMILY SSF46785 8 79 2.72E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 Pfam PF07729 FCD domain 89 208 5.0E-22 T 22-04-2016 IPR011711 GntR, C-terminal LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 PANTHER PTHR11751:SF362 3 101 1.4E-35 T 22-04-2016 LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.0E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.0E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS05935 cf49c59575d61cb4a813b784ec64c78f 228 PANTHER PTHR11751 3 101 1.4E-35 T 22-04-2016 LK04_RS18430 ebcdabef543dddb805b38ac7cde0e61e 353 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 298 6.2E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS18430 ebcdabef543dddb805b38ac7cde0e61e 353 SMART SM00382 39 231 1.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS18430 ebcdabef543dddb805b38ac7cde0e61e 353 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS18430 ebcdabef543dddb805b38ac7cde0e61e 353 PANTHER PTHR24220 6 332 3.1E-149 T 22-04-2016 LK04_RS18430 ebcdabef543dddb805b38ac7cde0e61e 353 SUPERFAMILY SSF52540 4 253 5.58E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18430 ebcdabef543dddb805b38ac7cde0e61e 353 PANTHER PTHR24220:SF336 6 332 3.1E-149 T 22-04-2016 LK04_RS18430 ebcdabef543dddb805b38ac7cde0e61e 353 Gene3D G3DSA:3.40.50.300 3 255 1.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18430 ebcdabef543dddb805b38ac7cde0e61e 353 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 8.2E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS18430 ebcdabef543dddb805b38ac7cde0e61e 353 Pfam PF00005 ABC transporter 31 181 2.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS01790 fe107a078603fc61c9492b3c25b64446 349 Pfam PF03235 Protein of unknown function DUF262 18 166 8.2E-20 T 22-04-2016 IPR004919 Domain of unknown function DUF262 LK04_RS01790 fe107a078603fc61c9492b3c25b64446 349 PANTHER PTHR39639 13 261 6.6E-15 T 22-04-2016 LK04_RS01380 95fcaae2c5bcc63f381b38abfcc8dde0 244 SUPERFAMILY SSF55315 2 75 4.94E-20 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LK04_RS01380 95fcaae2c5bcc63f381b38abfcc8dde0 244 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 76 6.5E-20 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LK04_RS01380 95fcaae2c5bcc63f381b38abfcc8dde0 244 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 6.8E-92 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 LK04_RS01380 95fcaae2c5bcc63f381b38abfcc8dde0 244 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.244 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB LK04_RS01380 95fcaae2c5bcc63f381b38abfcc8dde0 244 PANTHER PTHR12029 3 243 1.3E-82 T 22-04-2016 LK04_RS01380 95fcaae2c5bcc63f381b38abfcc8dde0 244 Gene3D G3DSA:3.30.1330.30 1 75 1.1E-26 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LK04_RS01380 95fcaae2c5bcc63f381b38abfcc8dde0 244 SMART SM00967 4 80 8.8E-22 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LK04_RS01380 95fcaae2c5bcc63f381b38abfcc8dde0 244 SUPERFAMILY SSF75217 86 243 4.77E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LK04_RS01380 95fcaae2c5bcc63f381b38abfcc8dde0 244 Pfam PF00588 SpoU rRNA Methylase family 96 236 5.8E-41 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LK04_RS01380 95fcaae2c5bcc63f381b38abfcc8dde0 244 Gene3D G3DSA:3.40.1280.10 93 242 1.3E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 SMART SM00347 46 148 1.3E-30 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 Pfam PF01047 MarR family 53 112 2.5E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 PANTHER PTHR18964 44 171 4.6E-50 T 22-04-2016 LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 Gene3D G3DSA:1.10.10.10 17 168 3.2E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 3.7E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 3.7E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 3.7E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 3.7E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 SUPERFAMILY SSF46785 20 167 2.28E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03785 2e2c183dee04b22e975229f96ece44c1 176 PANTHER PTHR18964:SF141 44 171 4.6E-50 T 22-04-2016 LK04_RS00060 48b0a770cd03ebe1a7cdaef1d9b570bc 278 Gene3D G3DSA:3.90.850.10 61 277 1.8E-66 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LK04_RS00060 48b0a770cd03ebe1a7cdaef1d9b570bc 278 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 76 277 2.6E-55 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LK04_RS00060 48b0a770cd03ebe1a7cdaef1d9b570bc 278 PANTHER PTHR11820:SF6 1 277 4.3E-93 T 22-04-2016 LK04_RS00060 48b0a770cd03ebe1a7cdaef1d9b570bc 278 PANTHER PTHR11820 1 277 4.3E-93 T 22-04-2016 LK04_RS00060 48b0a770cd03ebe1a7cdaef1d9b570bc 278 SUPERFAMILY SSF56529 63 277 2.35E-64 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LK04_RS06485 1baf6cfcaeaf5b7dc65b41599fcee91f 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 215 3.4E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06485 1baf6cfcaeaf5b7dc65b41599fcee91f 218 PANTHER PTHR30450 1 217 1.4E-104 T 22-04-2016 LK04_RS06485 1baf6cfcaeaf5b7dc65b41599fcee91f 218 PRINTS PR00173 Glutamate-aspartate symporter signature 153 172 1.4E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS06485 1baf6cfcaeaf5b7dc65b41599fcee91f 218 PRINTS PR00173 Glutamate-aspartate symporter signature 55 74 1.4E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS06485 1baf6cfcaeaf5b7dc65b41599fcee91f 218 PRINTS PR00173 Glutamate-aspartate symporter signature 17 36 1.4E-5 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS06485 1baf6cfcaeaf5b7dc65b41599fcee91f 218 Gene3D G3DSA:1.10.3720.10 8 216 1.9E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06485 1baf6cfcaeaf5b7dc65b41599fcee91f 218 SUPERFAMILY SSF161098 8 208 9.03E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06485 1baf6cfcaeaf5b7dc65b41599fcee91f 218 PANTHER PTHR30450:SF1 1 217 1.4E-104 T 22-04-2016 LK04_RS18425 492cb7a4cc4fbe6d4789dbc190d78468 331 SUPERFAMILY SSF52540 3 260 3.85E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18425 492cb7a4cc4fbe6d4789dbc190d78468 331 PANTHER PTHR24220 8 330 7.0E-145 T 22-04-2016 LK04_RS18425 492cb7a4cc4fbe6d4789dbc190d78468 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 8.8E-31 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS18425 492cb7a4cc4fbe6d4789dbc190d78468 331 Pfam PF00005 ABC transporter 24 182 1.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS18425 492cb7a4cc4fbe6d4789dbc190d78468 331 SMART SM00382 33 232 3.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS18425 492cb7a4cc4fbe6d4789dbc190d78468 331 PANTHER PTHR24220:SF535 8 330 7.0E-145 T 22-04-2016 LK04_RS18425 492cb7a4cc4fbe6d4789dbc190d78468 331 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS18425 492cb7a4cc4fbe6d4789dbc190d78468 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 5.8E-21 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS18425 492cb7a4cc4fbe6d4789dbc190d78468 331 Gene3D G3DSA:3.40.50.300 5 256 1.4E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16325 a5636cc485b49cb7be6a971c5fdef248 146 PIRSF PIRSF009554 2 145 2.9E-59 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 LK04_RS16325 a5636cc485b49cb7be6a971c5fdef248 146 SUPERFAMILY SSF50475 3 138 6.2E-18 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS16325 a5636cc485b49cb7be6a971c5fdef248 146 Gene3D G3DSA:2.30.110.10 11 111 1.1E-7 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LK04_RS16325 a5636cc485b49cb7be6a971c5fdef248 146 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 34.06 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 LK04_RS08165 242d378a45ded61a4345606329b60116 210 PANTHER PTHR36920:SF1 1 210 9.2E-87 T 22-04-2016 LK04_RS08165 242d378a45ded61a4345606329b60116 210 SUPERFAMILY SSF56925 22 210 1.7E-28 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS08165 242d378a45ded61a4345606329b60116 210 Gene3D G3DSA:2.40.160.20 21 210 1.7E-73 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS08165 242d378a45ded61a4345606329b60116 210 Pfam PF03922 OmpW family 22 210 1.6E-66 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 LK04_RS08165 242d378a45ded61a4345606329b60116 210 PANTHER PTHR36920 1 210 9.2E-87 T 22-04-2016 LK04_RS08165 242d378a45ded61a4345606329b60116 210 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 202 210 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 LK04_RS16775 30781408f5994f6c85e7af4893fded28 192 SUPERFAMILY SSF46689 2 64 2.87E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS16775 30781408f5994f6c85e7af4893fded28 192 PANTHER PTHR30055 1 192 1.7E-26 T 22-04-2016 LK04_RS16775 30781408f5994f6c85e7af4893fded28 192 Gene3D G3DSA:1.10.357.10 2 180 2.8E-16 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS16775 30781408f5994f6c85e7af4893fded28 192 PANTHER PTHR30055:SF92 1 192 1.7E-26 T 22-04-2016 LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 Gene3D G3DSA:3.90.650.10 146 322 1.5E-54 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 300 2.5E-10 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 3.6E-117 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 PANTHER PTHR30270:SF0 1 322 3.0E-143 T 22-04-2016 LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 PANTHER PTHR30270 1 322 3.0E-143 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 PIRSF PIRSF005303 1 322 2.9E-89 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 Gene3D G3DSA:3.30.1330.10 3 139 1.9E-45 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 9.1E-22 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 32.078 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 SUPERFAMILY SSF56042 143 308 4.19E-40 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LK04_RS14095 2cf3c891104639b1dd2f98fed77922a7 325 SUPERFAMILY SSF55326 4 138 1.43E-33 T 22-04-2016 LK04_RS18710 dc322b8af4226d6064444349c94b593b 437 PANTHER PTHR11119:SF9 1 423 2.7E-175 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 LK04_RS18710 dc322b8af4226d6064444349c94b593b 437 PIRSF PIRSF005353 1 436 3.9E-172 T 22-04-2016 IPR026033 Purine permease PbuG-like LK04_RS18710 dc322b8af4226d6064444349c94b593b 437 Pfam PF00860 Permease family 23 396 2.7E-44 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS18710 dc322b8af4226d6064444349c94b593b 437 PANTHER PTHR11119 1 423 2.7E-175 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS01520 d3f2088a2dbb314fa169d7126f44a70d 182 PIRSF PIRSF016183 10 182 8.4E-72 T 22-04-2016 IPR006839 Ribosome-associated, YjgA LK04_RS01520 d3f2088a2dbb314fa169d7126f44a70d 182 Gene3D G3DSA:1.10.60.30 112 181 5.8E-31 T 22-04-2016 IPR023153 PSPTO4464-like domain LK04_RS01520 d3f2088a2dbb314fa169d7126f44a70d 182 PANTHER PTHR38101:SF1 4 182 8.3E-85 T 22-04-2016 LK04_RS01520 d3f2088a2dbb314fa169d7126f44a70d 182 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 17 181 23.826 T 22-04-2016 IPR006839 Ribosome-associated, YjgA LK04_RS01520 d3f2088a2dbb314fa169d7126f44a70d 182 SUPERFAMILY SSF158710 38 180 4.32E-51 T 22-04-2016 LK04_RS01520 d3f2088a2dbb314fa169d7126f44a70d 182 PANTHER PTHR38101 4 182 8.3E-85 T 22-04-2016 LK04_RS01520 d3f2088a2dbb314fa169d7126f44a70d 182 Pfam PF04751 Protein of unknown function (DUF615) 27 177 2.0E-55 T 22-04-2016 IPR006839 Ribosome-associated, YjgA LK04_RS01520 d3f2088a2dbb314fa169d7126f44a70d 182 Gene3D G3DSA:1.10.60.30 37 111 1.5E-30 T 22-04-2016 IPR023153 PSPTO4464-like domain LK04_RS03090 f5768d68ab7b177791afe7fc5948b1e0 208 SUPERFAMILY SSF50494 44 206 1.68E-13 T 22-04-2016 IPR009003 Peptidase S1, PA clan LK04_RS02350 020302000fb5f2a383f12480a6833928 101 PANTHER PTHR34581 1 98 4.8E-40 T 22-04-2016 LK04_RS02350 020302000fb5f2a383f12480a6833928 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 94 1.0E-22 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS02350 020302000fb5f2a383f12480a6833928 101 PANTHER PTHR34581:SF2 1 98 4.8E-40 T 22-04-2016 LK04_RS02350 020302000fb5f2a383f12480a6833928 101 Gene3D G3DSA:3.40.50.270 1 99 3.2E-36 T 22-04-2016 LK04_RS02350 020302000fb5f2a383f12480a6833928 101 SUPERFAMILY SSF52794 1 99 4.45E-32 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS15850 8721bcdb7c220587d315fbb3953134cd 107 PANTHER PTHR38025:SF1 12 104 2.7E-38 T 22-04-2016 LK04_RS15850 8721bcdb7c220587d315fbb3953134cd 107 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 12 101 1.0E-26 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 LK04_RS15850 8721bcdb7c220587d315fbb3953134cd 107 PIRSF PIRSF003196 5 107 8.7E-37 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 LK04_RS15850 8721bcdb7c220587d315fbb3953134cd 107 PANTHER PTHR38025 12 104 2.7E-38 T 22-04-2016 LK04_RS15850 8721bcdb7c220587d315fbb3953134cd 107 SUPERFAMILY SSF48295 14 102 6.28E-25 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 LK04_RS15850 8721bcdb7c220587d315fbb3953134cd 107 TIGRFAM TIGR01321 TrpR: trp operon repressor 16 103 2.1E-33 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 LK04_RS15850 8721bcdb7c220587d315fbb3953134cd 107 Hamap MF_00475 Trp operon repressor [trpR]. 15 107 21.046 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 LK04_RS15850 8721bcdb7c220587d315fbb3953134cd 107 Gene3D G3DSA:1.10.1270.10 12 104 1.6E-39 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 LK04_RS15850 8721bcdb7c220587d315fbb3953134cd 107 Pfam PF01371 Trp repressor protein 18 102 9.5E-27 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 PANTHER PTHR10992 1 339 2.2E-78 T 22-04-2016 LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 PANTHER PTHR10992:SF827 1 339 2.2E-78 T 22-04-2016 LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 Gene3D G3DSA:3.40.50.1820 36 334 5.1E-78 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 PRINTS PR00412 Epoxide hydrolase signature 158 171 8.87E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 PRINTS PR00412 Epoxide hydrolase signature 314 336 8.87E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 PRINTS PR00412 Epoxide hydrolase signature 144 157 8.87E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 PRINTS PR00412 Epoxide hydrolase signature 99 114 8.87E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 SUPERFAMILY SSF53474 44 337 7.78E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 Pfam PF00561 alpha/beta hydrolase fold 74 209 2.3E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 114 9.33E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 171 9.33E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS00375 9a695ce063cade0b020e5fad58d463c5 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 144 157 9.33E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS10605 4f0860e8433898f0a38f11ba40dba293 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 320 1.9E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS10605 4f0860e8433898f0a38f11ba40dba293 355 PANTHER PTHR32196:SF21 2 345 8.3E-113 T 22-04-2016 LK04_RS10605 4f0860e8433898f0a38f11ba40dba293 355 PANTHER PTHR32196 2 345 8.3E-113 T 22-04-2016 LK04_RS00125 8e5d7418096e127f9bc72aa8a1f0b60a 125 PANTHER PTHR28259 1 121 2.3E-38 T 22-04-2016 LK04_RS00125 8e5d7418096e127f9bc72aa8a1f0b60a 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 2.2E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LK04_RS00125 8e5d7418096e127f9bc72aa8a1f0b60a 125 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 1.5E-32 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LK04_RS00125 8e5d7418096e127f9bc72aa8a1f0b60a 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.005 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 PRINTS PR00990 Ribokinase signature 126 145 2.94786E-27 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 PRINTS PR00990 Ribokinase signature 99 120 2.94786E-27 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 PRINTS PR00990 Ribokinase signature 311 322 2.94786E-27 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 PRINTS PR00990 Ribokinase signature 199 212 2.94786E-27 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 PRINTS PR00990 Ribokinase signature 267 282 2.94786E-27 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 Gene3D G3DSA:1.10.10.10 2 49 2.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 340 353 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 SUPERFAMILY SSF53613 96 395 1.5E-74 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 SMART SM00420 6 58 2.1E-13 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 PANTHER PTHR10584:SF166 78 397 5.5E-91 T 22-04-2016 LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 Pfam PF00294 pfkB family carbohydrate kinase 96 384 1.5E-61 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 Gene3D G3DSA:3.40.1190.20 95 397 3.8E-83 T 22-04-2016 IPR029056 Ribokinase-like LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.4E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 SUPERFAMILY SSF46785 3 61 7.9E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18780 16f32e500baffb9c15d720e579f9ef31 398 PANTHER PTHR10584 78 397 5.5E-91 T 22-04-2016 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 167 238 1.3E-20 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 166 235 3.8E-17 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 PRINTS PR01374 Gram-negative bacterial tonB protein signature 182 200 8.1E-35 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 PRINTS PR01374 Gram-negative bacterial tonB protein signature 201 218 8.1E-35 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 PRINTS PR01374 Gram-negative bacterial tonB protein signature 98 108 8.1E-35 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 182 8.1E-35 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 PANTHER PTHR33446:SF1 9 245 8.9E-37 T 22-04-2016 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 PANTHER PTHR33446 9 245 8.9E-37 T 22-04-2016 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 SUPERFAMILY SSF74653 165 227 6.15E-20 T 22-04-2016 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 Gene3D G3DSA:3.30.1150.10 138 240 1.2E-11 T 22-04-2016 LK04_RS08145 6e049c03fccea26efe15219b5997d115 245 Pfam PF16031 TonB N-terminal region 41 163 5.1E-23 T 22-04-2016 LK04_RS10800 4d977d3ffd9fa3c0eed97093353f1bfb 90 Pfam PF15567 Immunity protein 35 6 81 5.1E-17 T 22-04-2016 IPR029082 Immunity protein 35 LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 66 1.4E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 SMART SM00345 9 67 1.3E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 Gene3D G3DSA:3.40.1410.10 75 226 5.1E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.0E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.0E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 Gene3D G3DSA:1.10.10.10 6 71 3.1E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 SUPERFAMILY SSF46785 5 81 5.66E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 SUPERFAMILY SSF64288 55 228 2.04E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 Pfam PF07702 UTRA domain 88 225 1.9E-37 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 PANTHER PTHR11751 117 139 1.4E-31 T 22-04-2016 LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 PANTHER PTHR11751 9 70 1.4E-31 T 22-04-2016 LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 PANTHER PTHR11751:SF333 117 139 1.4E-31 T 22-04-2016 LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 PANTHER PTHR11751:SF333 9 70 1.4E-31 T 22-04-2016 LK04_RS17370 1d2fdc910161bb69437aa36aeb5443cb 232 SMART SM00866 88 227 5.7E-34 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LK04_RS07500 a97a6438a53dc7022be352d0619b8b7e 125 Pfam PF04234 CopC domain 28 124 2.1E-23 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 LK04_RS07500 a97a6438a53dc7022be352d0619b8b7e 125 PANTHER PTHR34820:SF1 1 124 2.4E-12 T 22-04-2016 IPR032694 Copper transport protein YcnJ GO:0006825 LK04_RS07500 a97a6438a53dc7022be352d0619b8b7e 125 PANTHER PTHR34820 1 124 2.4E-12 T 22-04-2016 LK04_RS07500 a97a6438a53dc7022be352d0619b8b7e 125 SUPERFAMILY SSF81296 27 125 1.54E-26 T 22-04-2016 IPR014756 Immunoglobulin E-set LK04_RS07500 a97a6438a53dc7022be352d0619b8b7e 125 Gene3D G3DSA:2.60.40.1220 27 125 1.2E-28 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like LK04_RS11655 3fc41fe4681867a99c1bdd85a81276b3 498 SUPERFAMILY SSF52091 408 485 6.47E-10 T 22-04-2016 IPR002645 STAS domain LK04_RS11655 3fc41fe4681867a99c1bdd85a81276b3 498 Gene3D G3DSA:3.30.750.24 409 483 3.1E-6 T 22-04-2016 IPR002645 STAS domain LK04_RS11655 3fc41fe4681867a99c1bdd85a81276b3 498 Pfam PF01740 STAS domain 417 483 2.0E-5 T 22-04-2016 IPR002645 STAS domain LK04_RS11655 3fc41fe4681867a99c1bdd85a81276b3 498 Pfam PF00916 Sulfate permease family 28 156 2.2E-16 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 LK04_RS11655 3fc41fe4681867a99c1bdd85a81276b3 498 Pfam PF00916 Sulfate permease family 172 351 2.9E-23 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 LK04_RS11655 3fc41fe4681867a99c1bdd85a81276b3 498 PANTHER PTHR11814 21 494 1.1E-182 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 LK04_RS11655 3fc41fe4681867a99c1bdd85a81276b3 498 PANTHER PTHR11814:SF76 21 494 1.1E-182 T 22-04-2016 LK04_RS04040 82eca1db5f48595102ecc277d276777c 242 Gene3D G3DSA:2.40.50.140 6 75 5.5E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS04040 82eca1db5f48595102ecc277d276777c 242 SUPERFAMILY SSF50249 4 75 1.88E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS04040 82eca1db5f48595102ecc277d276777c 242 PANTHER PTHR33991 1 241 1.7E-64 T 22-04-2016 LK04_RS04040 82eca1db5f48595102ecc277d276777c 242 Pfam PF02565 Recombination protein O C terminal 83 225 5.7E-23 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LK04_RS04040 82eca1db5f48595102ecc277d276777c 242 SUPERFAMILY SSF57863 85 204 1.75E-9 T 22-04-2016 LK04_RS04040 82eca1db5f48595102ecc277d276777c 242 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.782 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LK04_RS04040 82eca1db5f48595102ecc277d276777c 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 9.8E-40 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LK04_RS04040 82eca1db5f48595102ecc277d276777c 242 Pfam PF11967 Recombination protein O N terminal 4 76 1.5E-23 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal LK04_RS01435 c821cab735669d322bdc3d76846b2f5a 206 PANTHER PTHR10516:SF320 86 205 4.3E-63 T 22-04-2016 LK04_RS01435 c821cab735669d322bdc3d76846b2f5a 206 PANTHER PTHR10516:SF320 14 67 4.3E-63 T 22-04-2016 LK04_RS01435 c821cab735669d322bdc3d76846b2f5a 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 4.1E-22 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LK04_RS01435 c821cab735669d322bdc3d76846b2f5a 206 Gene3D G3DSA:1.10.287.460 2 88 3.2E-24 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LK04_RS01435 c821cab735669d322bdc3d76846b2f5a 206 Gene3D G3DSA:3.10.50.40 89 205 4.0E-49 T 22-04-2016 LK04_RS01435 c821cab735669d322bdc3d76846b2f5a 206 SUPERFAMILY SSF54534 8 205 2.55E-53 T 22-04-2016 LK04_RS01435 c821cab735669d322bdc3d76846b2f5a 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 2.9E-26 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LK04_RS01435 c821cab735669d322bdc3d76846b2f5a 206 PANTHER PTHR10516 86 205 4.3E-63 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LK04_RS01435 c821cab735669d322bdc3d76846b2f5a 206 PANTHER PTHR10516 14 67 4.3E-63 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 PIRSF PIRSF000876 1 346 3.9E-136 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 PANTHER PTHR24421 3 349 4.5E-179 T 22-04-2016 LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 SMART SM00448 4 119 1.3E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 Pfam PF00072 Response regulator receiver domain 6 109 3.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 SUPERFAMILY SSF52738 156 342 2.35E-74 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 PANTHER PTHR24421:SF21 3 349 4.5E-179 T 22-04-2016 LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 40.572 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 SUPERFAMILY SSF52172 1 108 7.54E-27 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 Pfam PF01339 CheB methylesterase 159 336 1.4E-61 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 Gene3D G3DSA:3.40.50.2300 2 108 2.5E-26 T 22-04-2016 LK04_RS10645 5835b67aaca8197d742689ed5a00fa7a 349 Gene3D G3DSA:3.40.50.180 155 341 2.4E-84 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LK04_RS16025 5e3e4411941d6e3c1ab39c3f3c991fe4 154 PANTHER PTHR30411:SF6 1 152 3.4E-71 T 22-04-2016 LK04_RS16025 5e3e4411941d6e3c1ab39c3f3c991fe4 154 Gene3D G3DSA:3.90.960.10 1 152 1.3E-47 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS16025 5e3e4411941d6e3c1ab39c3f3c991fe4 154 SUPERFAMILY SSF55826 5 152 1.7E-39 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS16025 5e3e4411941d6e3c1ab39c3f3c991fe4 154 PANTHER PTHR30411 1 152 3.4E-71 T 22-04-2016 LK04_RS16025 5e3e4411941d6e3c1ab39c3f3c991fe4 154 Pfam PF04073 Aminoacyl-tRNA editing domain 24 141 1.1E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LK04_RS07845 2c3e7fef0ef7fff0fc71f9868fb05490 65 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 57 18.457 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 LK04_RS07845 2c3e7fef0ef7fff0fc71f9868fb05490 65 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 2.0E-13 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 LK04_RS07845 2c3e7fef0ef7fff0fc71f9868fb05490 65 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 48 1.0E-25 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 LK04_RS19870 dd6fc3d22e240569e24e19a6a3af07e7 335 SUPERFAMILY SSF52540 3 331 2.66E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19870 dd6fc3d22e240569e24e19a6a3af07e7 335 Gene3D G3DSA:3.40.50.300 128 331 1.6E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19870 dd6fc3d22e240569e24e19a6a3af07e7 335 PANTHER PTHR40690 52 327 6.2E-65 T 22-04-2016 LK04_RS19870 dd6fc3d22e240569e24e19a6a3af07e7 335 Pfam PF07755 Protein of unknown function (DUF1611) 41 327 1.8E-107 T 22-04-2016 IPR011669 Protein of unknown function DUF1611 LK04_RS19870 dd6fc3d22e240569e24e19a6a3af07e7 335 Gene3D G3DSA:3.40.50.720 2 127 2.6E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19870 dd6fc3d22e240569e24e19a6a3af07e7 335 PIRSF PIRSF026760 3 334 3.6E-97 T 22-04-2016 IPR011669 Protein of unknown function DUF1611 LK04_RS19870 dd6fc3d22e240569e24e19a6a3af07e7 335 PANTHER PTHR40690:SF1 52 327 6.2E-65 T 22-04-2016 LK04_RS19315 163ecfa35090c12241b9261bdcad1d7d 307 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 49.311 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 LK04_RS19315 163ecfa35090c12241b9261bdcad1d7d 307 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 297 2.2E-97 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LK04_RS19315 163ecfa35090c12241b9261bdcad1d7d 307 PANTHER PTHR30606:SF7 3 307 4.8E-210 T 22-04-2016 LK04_RS19315 163ecfa35090c12241b9261bdcad1d7d 307 PIRSF PIRSF026649 3 306 6.3E-89 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LK04_RS19315 163ecfa35090c12241b9261bdcad1d7d 307 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 6.2E-135 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 LK04_RS19315 163ecfa35090c12241b9261bdcad1d7d 307 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 68.812 T 22-04-2016 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 LK04_RS19315 163ecfa35090c12241b9261bdcad1d7d 307 PANTHER PTHR30606 3 307 4.8E-210 T 22-04-2016 LK04_RS10490 1fd6ef6e40223a207785162a8cc53fa3 297 PANTHER PTHR12149 1 289 1.7E-105 T 22-04-2016 LK04_RS10490 1fd6ef6e40223a207785162a8cc53fa3 297 SUPERFAMILY SSF56112 5 272 6.08E-42 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS10490 1fd6ef6e40223a207785162a8cc53fa3 297 Gene3D G3DSA:3.90.1200.10 94 260 3.5E-11 T 22-04-2016 LK04_RS10490 1fd6ef6e40223a207785162a8cc53fa3 297 PANTHER PTHR12149:SF8 1 289 1.7E-105 T 22-04-2016 LK04_RS10490 1fd6ef6e40223a207785162a8cc53fa3 297 Pfam PF03881 Fructosamine kinase 1 285 8.6E-111 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase LK04_RS10490 1fd6ef6e40223a207785162a8cc53fa3 297 PIRSF PIRSF006221 1 287 6.1E-90 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase LK04_RS13580 002e52ebaca3878b6d953822d4563679 210 PANTHER PTHR10434 1 209 1.3E-59 T 22-04-2016 LK04_RS13580 002e52ebaca3878b6d953822d4563679 210 Gene3D G3DSA:3.40.1130.10 29 188 1.8E-17 T 22-04-2016 LK04_RS13580 002e52ebaca3878b6d953822d4563679 210 PANTHER PTHR10434:SF21 1 209 1.3E-59 T 22-04-2016 LK04_RS13580 002e52ebaca3878b6d953822d4563679 210 Pfam PF01553 Acyltransferase 24 154 1.4E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS13580 002e52ebaca3878b6d953822d4563679 210 SUPERFAMILY SSF69593 6 204 5.49E-35 T 22-04-2016 LK04_RS13580 002e52ebaca3878b6d953822d4563679 210 SMART SM00563 38 157 4.4E-28 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 2.0E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 2.0E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 2.0E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 PANTHER PTHR10744 6 82 4.4E-43 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 3.3E-37 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 Gene3D G3DSA:2.40.50.140 6 82 1.2E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 SUPERFAMILY SSF50249 5 82 1.37E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 5.0E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 Pfam PF00366 Ribosomal protein S17 10 76 5.6E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00915 67cc3d6f9e473d4b0ec9928577db37a8 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 25.573 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS09265 7a2eb2e36cad857577ef36955570c697 347 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 26 328 1.7E-98 T 22-04-2016 IPR010732 Type VI secretion, TssG-like LK04_RS09265 7a2eb2e36cad857577ef36955570c697 347 PANTHER PTHR35564 7 343 1.2E-76 T 22-04-2016 LK04_RS09265 7a2eb2e36cad857577ef36955570c697 347 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 26 328 3.7E-92 T 22-04-2016 IPR010732 Type VI secretion, TssG-like LK04_RS09265 7a2eb2e36cad857577ef36955570c697 347 PANTHER PTHR35564:SF1 7 343 1.2E-76 T 22-04-2016 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PANTHER PTHR11482:SF36 1 369 2.2E-278 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PANTHER PTHR11482:SF36 442 600 2.2E-278 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01180 Arginine decarboxylase signature 71 86 9.9E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01180 Arginine decarboxylase signature 467 488 9.9E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01180 Arginine decarboxylase signature 545 566 9.9E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01180 Arginine decarboxylase signature 95 109 9.9E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01180 Arginine decarboxylase signature 326 343 9.9E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01180 Arginine decarboxylase signature 199 221 9.9E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01180 Arginine decarboxylase signature 492 517 9.9E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01180 Arginine decarboxylase signature 175 196 9.9E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01180 Arginine decarboxylase signature 149 164 9.9E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 103 121 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 TIGRFAM TIGR01273 speA: arginine decarboxylase 11 636 7.4E-269 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PIRSF PIRSF001336 1 638 9.3E-251 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 103 121 4.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 4.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 125 137 4.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 545 558 4.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 4.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 370 564 1.9E-23 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 78 347 1.2E-70 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PANTHER PTHR11482 1 369 2.2E-278 T 22-04-2016 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 PANTHER PTHR11482 442 600 2.2E-278 T 22-04-2016 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 SUPERFAMILY SSF51419 71 348 1.07E-67 T 22-04-2016 IPR029066 PLP-binding barrel LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 637 42.441 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 Gene3D G3DSA:3.20.20.10 73 334 4.2E-61 T 22-04-2016 IPR029066 PLP-binding barrel LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 Gene3D G3DSA:2.40.37.10 335 359 7.2E-13 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 Gene3D G3DSA:2.40.37.10 458 590 7.2E-13 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LK04_RS02765 6fee641e44ebff57935a8d9253a4bb32 638 SUPERFAMILY SSF50621 459 564 2.55E-7 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LK04_RS14000 9542c57bd3d3132ad19d2651e8569ade 495 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 5.6E-121 T 22-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 LK04_RS14000 9542c57bd3d3132ad19d2651e8569ade 495 Pfam PF07690 Major Facilitator Superfamily 18 366 6.7E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS14000 9542c57bd3d3132ad19d2651e8569ade 495 Gene3D G3DSA:1.20.1250.20 16 201 1.1E-18 T 22-04-2016 LK04_RS14000 9542c57bd3d3132ad19d2651e8569ade 495 Gene3D G3DSA:1.20.1250.20 223 403 5.2E-12 T 22-04-2016 LK04_RS14000 9542c57bd3d3132ad19d2651e8569ade 495 SUPERFAMILY SSF103473 7 403 1.96E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS14000 9542c57bd3d3132ad19d2651e8569ade 495 PANTHER PTHR12778 3 400 2.6E-116 T 22-04-2016 LK04_RS09285 f0846f5c2a4c29556ab7582c48db6b56 267 Gene3D G3DSA:1.10.530.40 107 264 5.9E-31 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 LK04_RS09285 f0846f5c2a4c29556ab7582c48db6b56 267 Pfam PF01471 Putative peptidoglycan binding domain 17 65 8.2E-8 T 22-04-2016 IPR002477 Peptidoglycan binding-like LK04_RS09285 f0846f5c2a4c29556ab7582c48db6b56 267 Gene3D G3DSA:1.10.101.10 13 74 3.4E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like LK04_RS09285 f0846f5c2a4c29556ab7582c48db6b56 267 PANTHER PTHR38107:SF2 109 265 1.3E-12 T 22-04-2016 LK04_RS09285 f0846f5c2a4c29556ab7582c48db6b56 267 Pfam PF00959 Phage lysozyme 139 253 5.1E-13 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 LK04_RS09285 f0846f5c2a4c29556ab7582c48db6b56 267 PANTHER PTHR38107 109 265 1.3E-12 T 22-04-2016 LK04_RS09285 f0846f5c2a4c29556ab7582c48db6b56 267 SUPERFAMILY SSF53955 98 265 2.91E-29 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS09285 f0846f5c2a4c29556ab7582c48db6b56 267 SUPERFAMILY SSF47090 10 65 7.46E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like LK04_RS17615 987b217616b744fb630ade4a18a2ec16 307 Pfam PF01758 Sodium Bile acid symporter family 36 211 1.6E-38 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 LK04_RS17615 987b217616b744fb630ade4a18a2ec16 307 PANTHER PTHR10361 1 297 2.8E-88 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 LK04_RS14955 fabcb9dc89e1e62ff3609497963f3f34 285 Pfam PF01148 Cytidylyltransferase family 3 278 9.3E-69 T 22-04-2016 LK04_RS14955 fabcb9dc89e1e62ff3609497963f3f34 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 LK04_RS14955 fabcb9dc89e1e62ff3609497963f3f34 285 PANTHER PTHR13773 2 279 9.2E-87 T 22-04-2016 LK04_RS01500 fc7c5b01711239a252d6812681489822 96 SUPERFAMILY SSF47413 9 78 1.83E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS01500 fc7c5b01711239a252d6812681489822 96 Gene3D G3DSA:1.10.260.40 5 79 9.2E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS01500 fc7c5b01711239a252d6812681489822 96 SMART SM00530 14 73 1.5E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS01500 fc7c5b01711239a252d6812681489822 96 Pfam PF01381 Helix-turn-helix 15 73 4.6E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS11820 af7b976dbad0d6680bcc3c7ab08f3e79 105 SMART SM00992 3 102 8.7E-29 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 LK04_RS11820 af7b976dbad0d6680bcc3c7ab08f3e79 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 101 4.0E-29 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 LK04_RS11820 af7b976dbad0d6680bcc3c7ab08f3e79 105 SUPERFAMILY SSF141255 4 95 2.62E-27 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 LK04_RS11820 af7b976dbad0d6680bcc3c7ab08f3e79 105 PANTHER PTHR31350:SF6 1 90 1.5E-26 T 22-04-2016 LK04_RS11820 af7b976dbad0d6680bcc3c7ab08f3e79 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 2.4E-19 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 LK04_RS11820 af7b976dbad0d6680bcc3c7ab08f3e79 105 PANTHER PTHR31350 1 90 1.5E-26 T 22-04-2016 LK04_RS11820 af7b976dbad0d6680bcc3c7ab08f3e79 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 34.608 T 22-04-2016 IPR022866 Heat shock protein HspQ LK04_RS15315 d605a841392853c0944fea3275335b52 183 PANTHER PTHR30417:SF4 1 180 7.7E-89 T 22-04-2016 LK04_RS15315 d605a841392853c0944fea3275335b52 183 SUPERFAMILY SSF55846 3 179 2.49E-66 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LK04_RS15315 d605a841392853c0944fea3275335b52 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 62 167 6.2E-18 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LK04_RS15315 d605a841392853c0944fea3275335b52 183 Gene3D G3DSA:3.40.80.10 3 180 1.2E-67 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LK04_RS15315 d605a841392853c0944fea3275335b52 183 SMART SM00644 16 166 1.3E-51 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LK04_RS15315 d605a841392853c0944fea3275335b52 183 PANTHER PTHR30417 1 180 7.7E-89 T 22-04-2016 LK04_RS05530 bce35303373133b417a8fe10ff0a50fa 183 PANTHER PTHR33269 1 181 5.5E-102 T 22-04-2016 LK04_RS05530 bce35303373133b417a8fe10ff0a50fa 183 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 158 3.1E-36 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 LK04_RS05530 bce35303373133b417a8fe10ff0a50fa 183 PANTHER PTHR33269:SF2 1 181 5.5E-102 T 22-04-2016 LK04_RS15515 157e78893460233c586f9dd873678b92 254 PANTHER PTHR30353:SF7 1 252 6.2E-142 T 22-04-2016 LK04_RS15515 157e78893460233c586f9dd873678b92 254 PANTHER PTHR30353 1 252 6.2E-142 T 22-04-2016 IPR032818 DedA family LK04_RS15515 157e78893460233c586f9dd873678b92 254 Pfam PF09335 SNARE associated Golgi protein 36 159 1.1E-16 T 22-04-2016 IPR032816 SNARE associated Golgi protein LK04_RS01145 3de6159d90a0332cd21865845dd3bea9 481 PANTHER PTHR11819:SF125 2 477 1.4E-261 T 22-04-2016 LK04_RS01145 3de6159d90a0332cd21865845dd3bea9 481 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LK04_RS01145 3de6159d90a0332cd21865845dd3bea9 481 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 2.7E-219 T 22-04-2016 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 LK04_RS01145 3de6159d90a0332cd21865845dd3bea9 481 Pfam PF00474 Sodium:solute symporter family 36 432 5.1E-128 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS01145 3de6159d90a0332cd21865845dd3bea9 481 PANTHER PTHR11819 2 477 1.4E-261 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS01145 3de6159d90a0332cd21865845dd3bea9 481 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 4.0E-105 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS01145 3de6159d90a0332cd21865845dd3bea9 481 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LK04_RS13370 6ff1cfd6f3240e1a6e29a101d7f1f169 105 SUPERFAMILY SSF81301 4 105 6.87E-36 T 22-04-2016 LK04_RS13370 6ff1cfd6f3240e1a6e29a101d7f1f169 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 2.2E-27 T 22-04-2016 LK04_RS13370 6ff1cfd6f3240e1a6e29a101d7f1f169 105 Gene3D G3DSA:3.30.460.10 4 105 4.6E-37 T 22-04-2016 LK04_RS13370 6ff1cfd6f3240e1a6e29a101d7f1f169 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.3E-37 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LK04_RS13370 6ff1cfd6f3240e1a6e29a101d7f1f169 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.101 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LK04_RS13370 6ff1cfd6f3240e1a6e29a101d7f1f169 105 PANTHER PTHR21043 1 105 4.7E-45 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LK04_RS00855 8bf482cf8fe5c35352a27f52f4107329 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 7.4E-12 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain LK04_RS00855 8bf482cf8fe5c35352a27f52f4107329 64 PANTHER PTHR37424:SF1 2 64 3.3E-16 T 22-04-2016 LK04_RS00855 8bf482cf8fe5c35352a27f52f4107329 64 PANTHER PTHR37424 2 64 3.3E-16 T 22-04-2016 LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 SUPERFAMILY SSF46785 3 73 4.49E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 PANTHER PTHR30363 1 252 7.8E-125 T 22-04-2016 LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 9.9E-53 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 PANTHER PTHR30363:SF1 1 252 7.8E-125 T 22-04-2016 LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.2E-23 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 Gene3D G3DSA:1.10.10.10 2 58 5.0E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 SMART SM01134 72 233 6.5E-70 T 22-04-2016 LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 Gene3D G3DSA:3.30.750.70 72 153 4.5E-18 T 22-04-2016 LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 SMART SM00420 6 58 1.8E-25 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS00505 bb5e1cdbf6eb13656ee52c21956b5a06 252 SUPERFAMILY SSF100950 73 233 5.23E-29 T 22-04-2016 LK04_RS05975 c1f188f414a6a04c774bbdc3794ae69a 455 PANTHER PTHR30217:SF6 244 452 5.3E-235 T 22-04-2016 LK04_RS05975 c1f188f414a6a04c774bbdc3794ae69a 455 PANTHER PTHR30217:SF6 1 206 5.3E-235 T 22-04-2016 LK04_RS05975 c1f188f414a6a04c774bbdc3794ae69a 455 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS05975 c1f188f414a6a04c774bbdc3794ae69a 455 Pfam PF16325 Peptidase family U32 C-terminal domain 357 438 2.7E-20 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS05975 c1f188f414a6a04c774bbdc3794ae69a 455 PANTHER PTHR30217 244 452 5.3E-235 T 22-04-2016 LK04_RS05975 c1f188f414a6a04c774bbdc3794ae69a 455 PANTHER PTHR30217 1 206 5.3E-235 T 22-04-2016 LK04_RS05975 c1f188f414a6a04c774bbdc3794ae69a 455 Pfam PF01136 Peptidase family U32 76 341 2.5E-95 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS16835 d1397fa72f1151c3a1f27e371fe2779d 137 SUPERFAMILY SSF51230 46 132 2.39E-11 T 22-04-2016 IPR011053 Single hybrid motif LK04_RS16835 d1397fa72f1151c3a1f27e371fe2779d 137 Gene3D G3DSA:2.40.50.100 54 133 1.6E-10 T 22-04-2016 LK04_RS16835 d1397fa72f1151c3a1f27e371fe2779d 137 Pfam PF00364 Biotin-requiring enzyme 59 132 5.1E-9 T 22-04-2016 IPR000089 Biotin/lipoyl attachment LK04_RS08100 e7be6edfbd3691dc5191801d33aea522 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 464 6.6E-83 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS08100 e7be6edfbd3691dc5191801d33aea522 544 PIRSF PIRSF002741 1 544 3.9E-105 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS08100 e7be6edfbd3691dc5191801d33aea522 544 PANTHER PTHR30290 1 543 7.3E-182 T 22-04-2016 LK04_RS08100 e7be6edfbd3691dc5191801d33aea522 544 Gene3D G3DSA:3.90.76.10 50 223 7.1E-50 T 22-04-2016 LK04_RS08100 e7be6edfbd3691dc5191801d33aea522 544 PANTHER PTHR30290:SF10 1 543 7.3E-182 T 22-04-2016 LK04_RS08100 e7be6edfbd3691dc5191801d33aea522 544 SUPERFAMILY SSF53850 37 527 3.62E-137 T 22-04-2016 LK04_RS08100 e7be6edfbd3691dc5191801d33aea522 544 Gene3D G3DSA:3.10.105.10 299 512 7.8E-61 T 22-04-2016 LK04_RS07140 07fc7af5a2c21d4ffe56bc0da8d4554f 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 24 48 6.0E-5 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 LK04_RS07140 07fc7af5a2c21d4ffe56bc0da8d4554f 50 Pfam PF01848 Hok/gef family 16 46 3.2E-14 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 LK04_RS13060 3bf88bf872911c85b005c24b4de8fb04 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 5.4E-19 T 22-04-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545|UniPathway: UPA00705 LK04_RS13060 3bf88bf872911c85b005c24b4de8fb04 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 1.5E-14 T 22-04-2016 IPR012994 Membrane bound YbgT-like LK04_RS07805 6b467c6a123a9de5fa3adaf2a944c48a 281 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 10 279 1.7E-111 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 LK04_RS07805 6b467c6a123a9de5fa3adaf2a944c48a 281 PANTHER PTHR32502 1 281 1.1E-177 T 22-04-2016 LK04_RS07805 6b467c6a123a9de5fa3adaf2a944c48a 281 PANTHER PTHR32502:SF5 1 281 1.1E-177 T 22-04-2016 LK04_RS07805 6b467c6a123a9de5fa3adaf2a944c48a 281 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 9 279 5.3E-144 T 22-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 SUPERFAMILY SSF46785 165 245 1.15E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 SUPERFAMILY SSF51206 23 162 1.44E-31 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 SMART SM00100 30 151 6.8E-23 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 SMART SM00419 187 235 4.3E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 PANTHER PTHR24567:SF28 5 249 6.8E-132 T 22-04-2016 LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 Gene3D G3DSA:2.60.120.10 18 169 1.2E-39 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 3.1E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 Gene3D G3DSA:1.10.10.10 170 244 2.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.2E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.2E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 Pfam PF00325 Bacterial regulatory proteins, crp family 193 224 2.6E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LK04_RS08565 8db33a8db0fc6d2a335cb33e14f6c62d 250 PANTHER PTHR24567 5 249 6.8E-132 T 22-04-2016 LK04_RS14145 e63980951ca019c1aa7342f9ebbde801 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 5.2E-190 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS14145 e63980951ca019c1aa7342f9ebbde801 374 Gene3D G3DSA:3.20.20.105 1 366 6.2E-168 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS14145 e63980951ca019c1aa7342f9ebbde801 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 368 2.3E-179 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS14145 e63980951ca019c1aa7342f9ebbde801 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.281 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS14145 e63980951ca019c1aa7342f9ebbde801 374 PANTHER PTHR21148:SF26 1 364 3.2E-184 T 22-04-2016 LK04_RS14145 e63980951ca019c1aa7342f9ebbde801 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.3E-91 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS14145 e63980951ca019c1aa7342f9ebbde801 374 PANTHER PTHR21148 1 364 3.2E-184 T 22-04-2016 LK04_RS14145 e63980951ca019c1aa7342f9ebbde801 374 SUPERFAMILY SSF51713 2 364 5.36E-161 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LK04_RS00450 933793e58d7a4ede9b271d3331294bc4 501 Gene3D G3DSA:3.40.605.10 4 260 8.1E-92 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS00450 933793e58d7a4ede9b271d3331294bc4 501 PANTHER PTHR11699:SF188 1 497 0.0 T 22-04-2016 LK04_RS00450 933793e58d7a4ede9b271d3331294bc4 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 485 1.0E-197 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 LK04_RS00450 933793e58d7a4ede9b271d3331294bc4 501 Gene3D G3DSA:3.40.309.10 261 446 3.1E-65 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS00450 933793e58d7a4ede9b271d3331294bc4 501 SUPERFAMILY SSF53720 2 486 4.32E-147 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS00450 933793e58d7a4ede9b271d3331294bc4 501 Pfam PF00171 Aldehyde dehydrogenase family 15 480 3.2E-142 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS00450 933793e58d7a4ede9b271d3331294bc4 501 PANTHER PTHR11699 1 497 0.0 T 22-04-2016 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 SUPERFAMILY SSF55811 3 142 2.98E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 Pfam PF00293 NUDIX domain 5 141 2.7E-20 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 PANTHER PTHR22769 1 142 8.8E-52 T 22-04-2016 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.7E-5 T 22-04-2016 IPR020476 NUDIX hydrolase LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.7E-5 T 22-04-2016 IPR020476 NUDIX hydrolase LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 Gene3D G3DSA:3.90.79.10 3 142 5.2E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 4.1E-44 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 4.1E-44 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 4.1E-44 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 4.1E-44 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 4.1E-44 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 PANTHER PTHR22769:SF28 1 142 8.8E-52 T 22-04-2016 LK04_RS07400 022bf06057f376ab6b655d3d55a7dd6f 143 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 PANTHER PTHR30146:SF30 140 368 4.1E-28 T 22-04-2016 LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 SUPERFAMILY SSF53822 145 369 2.94E-30 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 Gene3D G3DSA:1.10.10.10 7 70 9.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 SMART SM00345 10 69 8.8E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 Gene3D G3DSA:3.40.50.2300 144 216 1.5E-7 T 22-04-2016 LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 Pfam PF13377 Periplasmic binding protein-like domain 216 368 1.3E-19 T 22-04-2016 LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 7.7E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 7.7E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 Gene3D G3DSA:3.40.50.2300 217 369 3.8E-32 T 22-04-2016 LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 1.1E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 SUPERFAMILY SSF46785 6 79 7.07E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08890 395f698e1f49c3c76c14a750b5b9bc8d 375 PANTHER PTHR30146 140 368 4.1E-28 T 22-04-2016 LK04_RS09675 ab1d784715f07a9d456237ed02d06921 262 Pfam PF00174 Oxidoreductase molybdopterin binding domain 107 251 2.8E-31 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LK04_RS09675 ab1d784715f07a9d456237ed02d06921 262 PANTHER PTHR19372:SF9 33 260 6.1E-98 T 22-04-2016 LK04_RS09675 ab1d784715f07a9d456237ed02d06921 262 PANTHER PTHR19372 33 260 6.1E-98 T 22-04-2016 LK04_RS09675 ab1d784715f07a9d456237ed02d06921 262 SUPERFAMILY SSF56524 59 261 1.44E-63 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LK04_RS09675 ab1d784715f07a9d456237ed02d06921 262 Gene3D G3DSA:3.90.420.10 102 260 1.1E-51 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 SUPERFAMILY SSF48239 1153 1411 7.4E-41 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 PIRSF PIRSF038980 21 1628 0.0 T 22-04-2016 IPR026284 Alpha-2-macroglobulin domain protein, bacteria LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 263 356 5.9E-18 T 22-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 SMART SM01360 944 1033 2.1E-18 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 PANTHER PTHR11412 362 624 1.3E-239 T 22-04-2016 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 PANTHER PTHR11412 640 937 1.3E-239 T 22-04-2016 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 PANTHER PTHR11412 1611 1618 1.3E-239 T 22-04-2016 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 PANTHER PTHR11412:SF104 362 624 1.3E-239 T 22-04-2016 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 PANTHER PTHR11412:SF104 640 937 1.3E-239 T 22-04-2016 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 PANTHER PTHR11412:SF104 1611 1618 1.3E-239 T 22-04-2016 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 Pfam PF00207 Alpha-2-macroglobulin family 951 1032 1.6E-6 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 732 879 3.4E-14 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 SMART SM01359 731 879 3.8E-37 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 Pfam PF01835 MG2 domain 362 453 1.6E-22 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 LK04_RS04170 dbe624c9afaf82545d8a87271c861ded 1628 Gene3D G3DSA:1.50.10.20 1153 1408 2.0E-33 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid LK04_RS06255 807d25629c7b9411c2cb372d486ae436 118 PIRSF PIRSF006298 1 117 6.2E-48 T 22-04-2016 IPR016480 Glucose translocase, bactoprenol-linked LK04_RS06255 807d25629c7b9411c2cb372d486ae436 118 Pfam PF04138 GtrA-like protein 7 115 9.8E-13 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 LK04_RS06255 807d25629c7b9411c2cb372d486ae436 118 PANTHER PTHR38459:SF1 1 118 4.2E-18 T 22-04-2016 LK04_RS06255 807d25629c7b9411c2cb372d486ae436 118 PANTHER PTHR38459 1 118 4.2E-18 T 22-04-2016 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 4.5E-42 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 PANTHER PTHR30314 1 382 4.0E-208 T 22-04-2016 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 374 38.038 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 333 3.0E-141 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 PRINTS PR00423 Cell division protein FtsZ signature 211 232 1.37E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 PRINTS PR00423 Cell division protein FtsZ signature 125 146 1.37E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 PRINTS PR00423 Cell division protein FtsZ signature 188 210 1.37E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 PRINTS PR00423 Cell division protein FtsZ signature 97 117 1.37E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 SUPERFAMILY SSF52490 12 207 1.44E-69 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 Gene3D G3DSA:3.40.50.1440 13 213 5.3E-93 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 SMART SM00865 206 324 8.3E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 SUPERFAMILY SSF55307 203 319 2.98E-42 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 PANTHER PTHR30314:SF3 1 382 4.0E-208 T 22-04-2016 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 Gene3D G3DSA:3.30.1330.20 214 321 8.7E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 Pfam PF12327 FtsZ family, C-terminal domain 221 315 8.6E-37 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal LK04_RS15380 80a6d766258bf95db0c3d3409ea82561 384 SMART SM00864 12 204 2.7E-111 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LK04_RS19705 ab34b360f737d3e1db7ccfab8951df29 623 Gene3D G3DSA:2.170.130.10 32 152 9.3E-40 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS19705 ab34b360f737d3e1db7ccfab8951df29 623 PANTHER PTHR30069:SF10 1 606 5.8E-293 T 22-04-2016 LK04_RS19705 ab34b360f737d3e1db7ccfab8951df29 623 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 623 36.157 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 LK04_RS19705 ab34b360f737d3e1db7ccfab8951df29 623 Pfam PF00593 TonB dependent receptor 398 622 1.0E-36 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS19705 ab34b360f737d3e1db7ccfab8951df29 623 Gene3D G3DSA:2.40.170.20 153 623 2.5E-97 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS19705 ab34b360f737d3e1db7ccfab8951df29 623 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 149 2.3E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS19705 ab34b360f737d3e1db7ccfab8951df29 623 PANTHER PTHR30069 1 606 5.8E-293 T 22-04-2016 LK04_RS19705 ab34b360f737d3e1db7ccfab8951df29 623 SUPERFAMILY SSF56935 32 623 4.4E-127 T 22-04-2016 LK04_RS19705 ab34b360f737d3e1db7ccfab8951df29 623 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 3 623 3.6E-234 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 LK04_RS15650 1c10a9fb19d543dc3a07a5cf6a28d019 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 1.9E-40 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS15650 1c10a9fb19d543dc3a07a5cf6a28d019 195 PANTHER PTHR10192 1 194 3.7E-89 T 22-04-2016 LK04_RS15650 1c10a9fb19d543dc3a07a5cf6a28d019 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 LK04_RS15650 1c10a9fb19d543dc3a07a5cf6a28d019 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 4.7E-29 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS15650 1c10a9fb19d543dc3a07a5cf6a28d019 195 Gene3D G3DSA:3.40.980.10 3 188 1.8E-50 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS15650 1c10a9fb19d543dc3a07a5cf6a28d019 195 SMART SM00852 7 153 6.8E-22 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS15650 1c10a9fb19d543dc3a07a5cf6a28d019 195 SUPERFAMILY SSF53218 3 188 3.14E-46 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS14360 a43525f75217d5b1e05206019b9416fc 104 Gene3D G3DSA:1.20.58.80 4 101 1.8E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS14360 a43525f75217d5b1e05206019b9416fc 104 PANTHER PTHR34382 1 104 3.1E-36 T 22-04-2016 LK04_RS14360 a43525f75217d5b1e05206019b9416fc 104 SUPERFAMILY SSF46973 5 99 1.2E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS14360 a43525f75217d5b1e05206019b9416fc 104 PANTHER PTHR34382:SF2 1 104 3.1E-36 T 22-04-2016 LK04_RS14360 a43525f75217d5b1e05206019b9416fc 104 PIRSF PIRSF000699 1 104 8.9E-32 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS14360 a43525f75217d5b1e05206019b9416fc 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 98 1.5E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.265808E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.265808E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.265808E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.265808E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.265808E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.265808E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 PIRSF PIRSF005419 13 695 9.8E-242 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 PANTHER PTHR30161:SF1 2 695 0.0 T 22-04-2016 LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 692 5.9E-280 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 PANTHER PTHR30161 2 695 0.0 T 22-04-2016 LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 22-04-2016 IPR025505 FHIPEP conserved site LK04_RS07335 2c056b42a6916bf72afe4c7e90008b31 695 Pfam PF00771 FHIPEP family 31 684 1.5E-268 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LK04_RS07860 40e44180be9574cecf105c44144ed12e 232 SUPERFAMILY SSF53067 5 107 4.66E-28 T 22-04-2016 LK04_RS07860 40e44180be9574cecf105c44144ed12e 232 SUPERFAMILY SSF53067 111 219 8.67E-31 T 22-04-2016 LK04_RS07860 40e44180be9574cecf105c44144ed12e 232 PANTHER PTHR11735:SF11 1 139 7.5E-58 T 22-04-2016 LK04_RS07860 40e44180be9574cecf105c44144ed12e 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 1.0E-66 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 LK04_RS07860 40e44180be9574cecf105c44144ed12e 232 Pfam PF00814 Glycoprotease family 30 152 7.8E-28 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LK04_RS07860 40e44180be9574cecf105c44144ed12e 232 PANTHER PTHR11735 1 139 7.5E-58 T 22-04-2016 LK04_RS07860 40e44180be9574cecf105c44144ed12e 232 Gene3D G3DSA:3.30.420.40 4 133 2.3E-42 T 22-04-2016 LK04_RS18155 eadf044f38ec5be08ff841dff6dc5292 232 Gene3D G3DSA:3.40.630.30 83 228 2.4E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS18155 eadf044f38ec5be08ff841dff6dc5292 232 Pfam PF00583 Acetyltransferase (GNAT) family 145 218 8.6E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS18155 eadf044f38ec5be08ff841dff6dc5292 232 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 229 5.9E-81 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 LK04_RS18155 eadf044f38ec5be08ff841dff6dc5292 232 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 43 229 44.784 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 LK04_RS18155 eadf044f38ec5be08ff841dff6dc5292 232 SUPERFAMILY SSF55729 82 229 3.77E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS18155 eadf044f38ec5be08ff841dff6dc5292 232 PANTHER PTHR23091 85 230 1.4E-15 T 22-04-2016 LK04_RS16590 6a1842315c996f1a1fdc6695b5511cb3 260 PANTHER PTHR30188:SF4 1 260 2.7E-123 T 22-04-2016 LK04_RS16590 6a1842315c996f1a1fdc6695b5511cb3 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 6.0E-104 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria LK04_RS16590 6a1842315c996f1a1fdc6695b5511cb3 260 Pfam PF02405 Permease MlaE 45 256 1.1E-73 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 LK04_RS16590 6a1842315c996f1a1fdc6695b5511cb3 260 PANTHER PTHR30188 1 260 2.7E-123 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 PANTHER PTHR34217:SF1 2 493 4.0E-244 T 22-04-2016 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 289 305 2.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 399 420 2.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 242 261 2.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 262 281 2.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 329 348 2.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 2.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 146 166 2.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 SUPERFAMILY SSF55486 3 493 4.92E-119 T 22-04-2016 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 492 1.7E-98 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 PANTHER PTHR34217 2 493 4.0E-244 T 22-04-2016 LK04_RS08520 17b25710c21284390c2f39d97ca19a22 495 PIRSF PIRSF006615 1 495 1.6E-193 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LK04_RS00595 31b3eea62e5480de0ab2394ca506cae2 713 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 1 699 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 LK04_RS00595 31b3eea62e5480de0ab2394ca506cae2 713 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 705 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 LK04_RS05280 a980abbc6e769fbbfd28bd214ecad72e 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS05280 a980abbc6e769fbbfd28bd214ecad72e 361 PANTHER PTHR21085 2 352 5.8E-224 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS05280 a980abbc6e769fbbfd28bd214ecad72e 361 PIRSF PIRSF001456 3 360 8.2E-144 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS05280 a980abbc6e769fbbfd28bd214ecad72e 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.2E-141 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS05280 a980abbc6e769fbbfd28bd214ecad72e 361 Gene3D G3DSA:3.60.150.10 9 352 1.6E-161 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS05280 a980abbc6e769fbbfd28bd214ecad72e 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS05280 a980abbc6e769fbbfd28bd214ecad72e 361 SUPERFAMILY SSF103263 4 352 2.22E-149 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS05280 a980abbc6e769fbbfd28bd214ecad72e 361 Pfam PF01264 Chorismate synthase 10 345 4.2E-144 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS05280 a980abbc6e769fbbfd28bd214ecad72e 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS05280 a980abbc6e769fbbfd28bd214ecad72e 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.888 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS02595 fe37ac1b512ac10233bcf388602d61d3 240 Pfam PF04474 Protein of unknown function (DUF554) 3 232 4.3E-63 T 22-04-2016 IPR007563 Protein of unknown function DUF554 LK04_RS02595 fe37ac1b512ac10233bcf388602d61d3 240 PANTHER PTHR36111:SF1 2 240 2.7E-83 T 22-04-2016 LK04_RS02595 fe37ac1b512ac10233bcf388602d61d3 240 PANTHER PTHR36111 2 240 2.7E-83 T 22-04-2016 LK04_RS14365 f09a2ebabb86dccae1a5d751fcaf0e1f 438 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 426 1.4E-112 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 LK04_RS14365 f09a2ebabb86dccae1a5d751fcaf0e1f 438 PANTHER PTHR33989 3 430 6.6E-153 T 22-04-2016 LK04_RS14365 f09a2ebabb86dccae1a5d751fcaf0e1f 438 Pfam PF02378 Phosphotransferase system, EIIC 33 352 4.3E-57 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS14365 f09a2ebabb86dccae1a5d751fcaf0e1f 438 PIRSF PIRSF006351 5 434 1.0E-142 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LK04_RS14365 f09a2ebabb86dccae1a5d751fcaf0e1f 438 PANTHER PTHR33989:SF4 3 430 6.6E-153 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 SUPERFAMILY SSF52540 129 375 2.3E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 PANTHER PTHR10799 892 968 9.2E-264 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 PANTHER PTHR10799 150 354 9.2E-264 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 PANTHER PTHR10799 1 9 9.2E-264 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 PANTHER PTHR10799 799 840 9.2E-264 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 PANTHER PTHR10799 395 694 9.2E-264 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 Pfam PF00176 SNF2 family N-terminal domain 174 442 1.1E-20 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 Gene3D G3DSA:3.40.50.300 484 621 1.1E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 SMART SM00487 150 342 2.4E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 PANTHER PTHR10799:SF610 892 968 9.2E-264 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 PANTHER PTHR10799:SF610 150 354 9.2E-264 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 PANTHER PTHR10799:SF610 1 9 9.2E-264 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 PANTHER PTHR10799:SF610 799 840 9.2E-264 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 PANTHER PTHR10799:SF610 395 694 9.2E-264 T 22-04-2016 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 SMART SM00490 517 601 1.4E-15 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 SUPERFAMILY SSF52540 480 643 2.25E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 Pfam PF00271 Helicase conserved C-terminal domain 493 601 1.1E-14 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 SUPERFAMILY SSF52540 273 337 2.25E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 Gene3D G3DSA:3.40.50.300 159 323 1.8E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 1.4E-154 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 LK04_RS15525 44541e1169387c90e9f09af1e0bd348b 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 70.788 T 22-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 LK04_RS11285 3902f0c1b3485edbfdcf9bb2c2aadaf5 339 PANTHER PTHR30518:SF2 1 339 1.9E-92 T 22-04-2016 LK04_RS11285 3902f0c1b3485edbfdcf9bb2c2aadaf5 339 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 8 335 1.7E-117 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like LK04_RS11285 3902f0c1b3485edbfdcf9bb2c2aadaf5 339 Pfam PF02618 YceG-like family 44 327 8.2E-80 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like LK04_RS11285 3902f0c1b3485edbfdcf9bb2c2aadaf5 339 PANTHER PTHR30518 1 339 1.9E-92 T 22-04-2016 LK04_RS11285 3902f0c1b3485edbfdcf9bb2c2aadaf5 339 Gene3D G3DSA:3.30.160.60 72 109 1.1E-21 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 LK04_RS11285 3902f0c1b3485edbfdcf9bb2c2aadaf5 339 Gene3D G3DSA:3.30.160.60 301 338 7.2E-19 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 LK04_RS00240 bea9705711e2abe83b683261e804fc1b 115 Gene3D G3DSA:3.10.640.10 50 113 2.1E-5 T 22-04-2016 LK04_RS04780 fa0595625365f263fa67ca8fedc2cc6d 413 Pfam PF01566 Natural resistance-associated macrophage protein 38 383 3.6E-123 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LK04_RS04780 fa0595625365f263fa67ca8fedc2cc6d 413 PANTHER PTHR11706:SF42 2 413 3.9E-240 T 22-04-2016 LK04_RS04780 fa0595625365f263fa67ca8fedc2cc6d 413 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 7.9E-99 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LK04_RS04780 fa0595625365f263fa67ca8fedc2cc6d 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 1.2E-29 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LK04_RS04780 fa0595625365f263fa67ca8fedc2cc6d 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 1.2E-29 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LK04_RS04780 fa0595625365f263fa67ca8fedc2cc6d 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 1.2E-29 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LK04_RS04780 fa0595625365f263fa67ca8fedc2cc6d 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 1.2E-29 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LK04_RS04780 fa0595625365f263fa67ca8fedc2cc6d 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 1.2E-29 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LK04_RS04780 fa0595625365f263fa67ca8fedc2cc6d 413 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 4 410 36.541 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LK04_RS04780 fa0595625365f263fa67ca8fedc2cc6d 413 PANTHER PTHR11706 2 413 3.9E-240 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LK04_RS16280 a2463d8454654b9b634d56ef2b6f36bd 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.476 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B LK04_RS16280 a2463d8454654b9b634d56ef2b6f36bd 140 Pfam PF06877 Regulator of ribonuclease activity B 12 113 5.9E-32 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain LK04_RS16280 a2463d8454654b9b634d56ef2b6f36bd 140 SUPERFAMILY SSF89946 2 123 1.15E-40 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain LK04_RS16280 a2463d8454654b9b634d56ef2b6f36bd 140 Gene3D G3DSA:3.30.70.970 1 124 1.5E-53 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain LK04_RS16280 a2463d8454654b9b634d56ef2b6f36bd 140 PIRSF PIRSF018193 1 140 7.2E-65 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B LK04_RS09845 28173366a89d5f8e3370b11b908de164 488 Pfam PF06381 Protein of unknown function (DUF1073) 52 422 2.7E-18 T 22-04-2016 IPR024459 Protein of unknown function DUF1073 LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 SUPERFAMILY SSF46785 1 111 2.06E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 Pfam PF03466 LysR substrate binding domain 89 293 1.6E-41 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 Gene3D G3DSA:3.40.190.10 81 198 1.2E-25 T 22-04-2016 LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 SUPERFAMILY SSF53850 89 293 6.08E-37 T 22-04-2016 LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 Gene3D G3DSA:3.40.190.10 199 259 2.4E-11 T 22-04-2016 LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 Gene3D G3DSA:1.10.10.10 1 80 6.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 PANTHER PTHR30126 1 293 8.4E-179 T 22-04-2016 LK04_RS19795 50397a71962d219a2ec7aad28c0a130f 293 PANTHER PTHR30126:SF14 1 293 8.4E-179 T 22-04-2016 LK04_RS07880 736b75496bc1b40e4d0c50fb662990f4 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 5.9E-36 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LK04_RS07880 736b75496bc1b40e4d0c50fb662990f4 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.499 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LK04_RS07880 736b75496bc1b40e4d0c50fb662990f4 89 SUPERFAMILY SSF55229 32 85 1.83E-18 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LK04_RS07880 736b75496bc1b40e4d0c50fb662990f4 89 PANTHER PTHR33404 1 89 8.2E-37 T 22-04-2016 LK04_RS07880 736b75496bc1b40e4d0c50fb662990f4 89 Gene3D G3DSA:3.30.1070.10 31 85 2.6E-25 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LK04_RS07880 736b75496bc1b40e4d0c50fb662990f4 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 3.5E-25 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LK04_RS17445 c2ef4684ba1ec20250a30bc02f11c68a 247 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 14 240 8.7E-36 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LK04_RS17445 c2ef4684ba1ec20250a30bc02f11c68a 247 SUPERFAMILY SSF51695 7 241 3.92E-62 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LK04_RS17445 c2ef4684ba1ec20250a30bc02f11c68a 247 PANTHER PTHR23344:SF20 4 242 7.5E-73 T 22-04-2016 LK04_RS17445 c2ef4684ba1ec20250a30bc02f11c68a 247 Gene3D G3DSA:3.20.20.190 4 241 4.6E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LK04_RS17445 c2ef4684ba1ec20250a30bc02f11c68a 247 PANTHER PTHR23344 4 242 7.5E-73 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 LK04_RS11520 48802d34643da2b8f80b8b680ed785fa 521 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 16 519 62.209 T 22-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 LK04_RS11520 48802d34643da2b8f80b8b680ed785fa 521 SUPERFAMILY SSF81296 408 520 5.6E-33 T 22-04-2016 IPR014756 Immunoglobulin E-set LK04_RS11520 48802d34643da2b8f80b8b680ed785fa 521 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 33 517 1.8E-199 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 LK04_RS11520 48802d34643da2b8f80b8b680ed785fa 521 PIRSF PIRSF006281 2 521 1.9E-239 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 LK04_RS11520 48802d34643da2b8f80b8b680ed785fa 521 Gene3D G3DSA:2.70.98.10 32 405 8.3E-176 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LK04_RS11520 48802d34643da2b8f80b8b680ed785fa 521 PANTHER PTHR30504:SF4 14 521 0.0 T 22-04-2016 LK04_RS11520 48802d34643da2b8f80b8b680ed785fa 521 Gene3D G3DSA:2.60.40.10 409 520 9.8E-41 T 22-04-2016 IPR013783 Immunoglobulin-like fold LK04_RS11520 48802d34643da2b8f80b8b680ed785fa 521 SUPERFAMILY SSF74650 33 404 2.1E-164 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LK04_RS11520 48802d34643da2b8f80b8b680ed785fa 521 PANTHER PTHR30504 14 521 0.0 T 22-04-2016 LK04_RS17485 c5b4e74389d61ae6cd3b5629cd5a5086 308 PANTHER PTHR11795:SF371 7 308 4.8E-147 T 22-04-2016 LK04_RS17485 c5b4e74389d61ae6cd3b5629cd5a5086 308 PANTHER PTHR11795 7 308 4.8E-147 T 22-04-2016 LK04_RS17485 c5b4e74389d61ae6cd3b5629cd5a5086 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 2.2E-65 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 Gene3D G3DSA:3.40.50.720 1 163 9.2E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 SMART SM00846 3 155 1.1E-76 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 SUPERFAMILY SSF51735 1 180 3.96E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 PANTHER PTHR10836 1 339 7.9E-240 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 1.0E-186 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 5.1E-31 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 5.1E-31 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 5.1E-31 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 5.1E-31 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 5.1E-31 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 65.189 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 3.0E-51 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 PIRSF PIRSF000149 1 337 6.7E-130 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 SUPERFAMILY SSF55347 155 317 9.82E-58 T 22-04-2016 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 PANTHER PTHR10836:SF47 1 339 7.9E-240 T 22-04-2016 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 2.9E-54 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 LK04_RS02875 f48842db9513ec2d8a0c238f5743bb9d 339 Gene3D G3DSA:3.30.360.10 164 318 3.8E-61 T 22-04-2016 LK04_RS04940 8a4bfe61b39f8d66d0d26a26aa1008f6 53 Pfam PF07026 Protein of unknown function (DUF1317) 1 47 2.2E-17 T 22-04-2016 IPR009750 Protein of unknown function DUF1317 LK04_RS01625 8903da115dfbe1ac7f6dc3da2710a37c 109 Pfam PF00893 Small Multidrug Resistance protein 9 99 5.2E-26 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 LK04_RS01625 8903da115dfbe1ac7f6dc3da2710a37c 109 SUPERFAMILY SSF103481 12 108 1.28E-17 T 22-04-2016 LK04_RS01625 8903da115dfbe1ac7f6dc3da2710a37c 109 PANTHER PTHR30561:SF6 5 109 1.5E-57 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 LK04_RS01625 8903da115dfbe1ac7f6dc3da2710a37c 109 PANTHER PTHR30561 5 109 1.5E-57 T 22-04-2016 LK04_RS01625 8903da115dfbe1ac7f6dc3da2710a37c 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 29.25 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 SUPERFAMILY SSF56176 8 269 3.41E-71 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 Gene3D G3DSA:3.30.43.10 4 86 4.5E-7 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 Pfam PF09330 D-lactate dehydrogenase, membrane binding 276 565 8.5E-148 T 22-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 PIRSF PIRSF000101 2 567 6.0E-290 T 22-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 PANTHER PTHR11748:SF82 240 315 2.3E-61 T 22-04-2016 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 PANTHER PTHR11748:SF82 10 189 2.3E-61 T 22-04-2016 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 SUPERFAMILY SSF55103 274 565 1.85E-115 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 Gene3D G3DSA:3.30.1370.20 433 516 1.1E-44 T 22-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 PANTHER PTHR11748 240 315 2.3E-61 T 22-04-2016 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 PANTHER PTHR11748 10 189 2.3E-61 T 22-04-2016 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 Gene3D G3DSA:3.30.70.610 375 432 7.2E-43 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 Gene3D G3DSA:3.30.70.610 267 308 7.2E-43 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 Pfam PF01565 FAD binding domain 45 183 5.9E-9 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LK04_RS12725 ba8e0979ff14a83686537ce0c410c7a3 569 Gene3D G3DSA:3.30.465.10 105 266 2.2E-82 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 2.6E-13 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 PANTHER PTHR12835 1 317 1.1E-94 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 Pfam PF08279 HTH domain 9 58 3.2E-11 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 SUPERFAMILY SSF50037 271 317 2.47E-11 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 Gene3D G3DSA:1.10.10.10 1 63 2.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 Gene3D G3DSA:2.30.30.100 271 318 6.2E-24 T 22-04-2016 LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 83 208 1.3E-22 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 SUPERFAMILY SSF46785 3 60 2.45E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.75 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 SUPERFAMILY SSF55681 72 268 8.29E-58 T 22-04-2016 LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 Gene3D G3DSA:3.30.930.10 77 268 2.8E-58 T 22-04-2016 LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 74 4.3E-25 T 22-04-2016 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 LK04_RS17845 9b6e212822f8a5bce4db476e94c3e10e 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 317 6.8E-76 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 LK04_RS00130 3a42634dcbf7b0643189752ee755391a 265 PANTHER PTHR12110:SF14 18 256 3.7E-37 T 22-04-2016 LK04_RS00130 3a42634dcbf7b0643189752ee755391a 265 Pfam PF01261 Xylose isomerase-like TIM barrel 21 217 4.7E-20 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS00130 3a42634dcbf7b0643189752ee755391a 265 SUPERFAMILY SSF51658 10 264 2.21E-56 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS00130 3a42634dcbf7b0643189752ee755391a 265 PANTHER PTHR12110 18 256 3.7E-37 T 22-04-2016 LK04_RS00130 3a42634dcbf7b0643189752ee755391a 265 Gene3D G3DSA:3.20.20.150 14 263 2.4E-55 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS02275 597beb7cdf9be0e71ebf2e145c6ab67c 237 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.6E-125 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 LK04_RS02275 597beb7cdf9be0e71ebf2e145c6ab67c 237 SUPERFAMILY SSF53167 3 234 2.23E-94 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS02275 597beb7cdf9be0e71ebf2e145c6ab67c 237 Gene3D G3DSA:3.40.50.1580 10 233 8.8E-84 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS02275 597beb7cdf9be0e71ebf2e145c6ab67c 237 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 LK04_RS02275 597beb7cdf9be0e71ebf2e145c6ab67c 237 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.584 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 LK04_RS02275 597beb7cdf9be0e71ebf2e145c6ab67c 237 Pfam PF01048 Phosphorylase superfamily 15 218 1.2E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LK04_RS02275 597beb7cdf9be0e71ebf2e145c6ab67c 237 PANTHER PTHR21234:SF8 3 234 1.3E-84 T 22-04-2016 LK04_RS02275 597beb7cdf9be0e71ebf2e145c6ab67c 237 PANTHER PTHR21234 3 234 1.3E-84 T 22-04-2016 IPR018017 Nucleoside phosphorylase LK04_RS14120 0f639b6950dee624df70a813c6835a5c 145 Gene3D G3DSA:3.10.350.10 93 144 4.0E-12 T 22-04-2016 IPR018392 LysM domain LK04_RS14120 0f639b6950dee624df70a813c6835a5c 145 Pfam PF04972 BON domain 27 87 2.7E-10 T 22-04-2016 IPR007055 BON domain LK04_RS14120 0f639b6950dee624df70a813c6835a5c 145 SMART SM00749 25 88 1.1E-5 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LK04_RS14120 0f639b6950dee624df70a813c6835a5c 145 SMART SM00257 95 144 2.0E-12 T 22-04-2016 IPR018392 LysM domain LK04_RS14120 0f639b6950dee624df70a813c6835a5c 145 Pfam PF01476 LysM domain 96 144 4.0E-11 T 22-04-2016 IPR018392 LysM domain LK04_RS14120 0f639b6950dee624df70a813c6835a5c 145 SUPERFAMILY SSF54106 94 144 1.7E-8 T 22-04-2016 IPR018392 LysM domain LK04_RS14120 0f639b6950dee624df70a813c6835a5c 145 PANTHER PTHR34700 1 145 2.5E-31 T 22-04-2016 LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 SUPERFAMILY SSF52518 357 545 1.34E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 5.8E-41 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 Gene3D G3DSA:3.40.50.970 335 537 1.4E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 6.6E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 1.6E-216 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 SUPERFAMILY SSF52467 181 342 5.86E-57 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 Gene3D G3DSA:3.40.50.1220 183 334 1.4E-55 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 162 6.1E-56 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 PANTHER PTHR18968 1 545 4.0E-266 T 22-04-2016 LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 Gene3D G3DSA:3.40.50.970 1 169 7.6E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 SUPERFAMILY SSF52518 1 174 8.16E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LK04_RS19770 f11aeed62e7fc7a32277f60ebc768591 548 PANTHER PTHR18968:SF116 1 545 4.0E-266 T 22-04-2016 LK04_RS03575 18f2733c0fa3da71920106e8de744ff1 151 Hamap MF_01114 Regulatory protein RecX [recX]. 1 151 12.863 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 LK04_RS03575 18f2733c0fa3da71920106e8de744ff1 151 PANTHER PTHR33602 1 151 9.2E-42 T 22-04-2016 LK04_RS03575 18f2733c0fa3da71920106e8de744ff1 151 Gene3D G3DSA:1.10.10.10 55 100 1.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03575 18f2733c0fa3da71920106e8de744ff1 151 Gene3D G3DSA:1.10.10.10 101 150 4.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03575 18f2733c0fa3da71920106e8de744ff1 151 Pfam PF02631 RecX family 37 147 1.3E-33 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 LK04_RS03575 18f2733c0fa3da71920106e8de744ff1 151 Gene3D G3DSA:1.10.10.10 1 54 2.4E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03575 18f2733c0fa3da71920106e8de744ff1 151 PANTHER PTHR33602:SF1 1 151 9.2E-42 T 22-04-2016 LK04_RS08935 1d7dc55df65cc43b095560fbcd30101f 312 SUPERFAMILY SSF51658 4 311 1.26E-38 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS08935 1d7dc55df65cc43b095560fbcd30101f 312 Gene3D G3DSA:3.20.20.150 40 187 5.6E-13 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS08935 1d7dc55df65cc43b095560fbcd30101f 312 Pfam PF01261 Xylose isomerase-like TIM barrel 54 238 1.4E-6 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS02345 da4db546e5cd371ff9ad525b79583bfb 113 PANTHER PTHR34382 1 112 1.1E-36 T 22-04-2016 LK04_RS02345 da4db546e5cd371ff9ad525b79583bfb 113 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 12 104 4.3E-29 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS02345 da4db546e5cd371ff9ad525b79583bfb 113 SUPERFAMILY SSF46973 7 105 1.96E-30 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS02345 da4db546e5cd371ff9ad525b79583bfb 113 PANTHER PTHR34382:SF2 1 112 1.1E-36 T 22-04-2016 LK04_RS02345 da4db546e5cd371ff9ad525b79583bfb 113 Gene3D G3DSA:1.20.58.80 8 106 1.1E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS02345 da4db546e5cd371ff9ad525b79583bfb 113 PIRSF PIRSF000699 3 109 1.0E-31 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS19185 f441d15598ffc85434e4d67bc25388b5 213 PANTHER PTHR11649 6 199 5.1E-58 T 22-04-2016 LK04_RS19185 f441d15598ffc85434e4d67bc25388b5 213 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.337 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 LK04_RS19185 f441d15598ffc85434e4d67bc25388b5 213 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 2.2E-74 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 LK04_RS19185 f441d15598ffc85434e4d67bc25388b5 213 Pfam PF01926 50S ribosome-binding GTPase 28 146 1.8E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS19185 f441d15598ffc85434e4d67bc25388b5 213 Gene3D G3DSA:3.40.50.300 10 197 1.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19185 f441d15598ffc85434e4d67bc25388b5 213 SUPERFAMILY SSF52540 17 200 1.88E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16850 2b90dadfc91a0d2a331240625c27ba32 253 SUPERFAMILY SSF161098 24 216 5.36E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16850 2b90dadfc91a0d2a331240625c27ba32 253 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 224 2.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16850 2b90dadfc91a0d2a331240625c27ba32 253 PANTHER PTHR30614 25 231 7.7E-79 T 22-04-2016 LK04_RS16850 2b90dadfc91a0d2a331240625c27ba32 253 Gene3D G3DSA:1.10.3720.10 26 225 8.8E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16850 2b90dadfc91a0d2a331240625c27ba32 253 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 119 6.0E-27 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS08530 723eb6d78f874922b62b0a1e8c626c9f 241 SMART SM00448 2 112 8.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS08530 723eb6d78f874922b62b0a1e8c626c9f 241 SUPERFAMILY SSF46894 132 232 3.12E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS08530 723eb6d78f874922b62b0a1e8c626c9f 241 SMART SM00862 155 231 2.1E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS08530 723eb6d78f874922b62b0a1e8c626c9f 241 PANTHER PTHR26402:SF548 2 239 2.2E-145 T 22-04-2016 LK04_RS08530 723eb6d78f874922b62b0a1e8c626c9f 241 Pfam PF00072 Response regulator receiver domain 4 112 2.6E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS08530 723eb6d78f874922b62b0a1e8c626c9f 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 7.8E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LK04_RS08530 723eb6d78f874922b62b0a1e8c626c9f 241 SUPERFAMILY SSF52172 2 126 1.57E-31 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS08530 723eb6d78f874922b62b0a1e8c626c9f 241 Gene3D G3DSA:1.10.10.10 132 234 4.0E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08530 723eb6d78f874922b62b0a1e8c626c9f 241 Gene3D G3DSA:3.40.50.2300 1 131 1.6E-30 T 22-04-2016 LK04_RS08530 723eb6d78f874922b62b0a1e8c626c9f 241 PANTHER PTHR26402 2 239 2.2E-145 T 22-04-2016 LK04_RS04630 d01ff89a1a90891c1ea8e83464301a30 362 SUPERFAMILY SSF52540 3 246 9.66E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04630 d01ff89a1a90891c1ea8e83464301a30 362 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS04630 d01ff89a1a90891c1ea8e83464301a30 362 PANTHER PTHR24220:SF123 4 289 9.6E-144 T 22-04-2016 LK04_RS04630 d01ff89a1a90891c1ea8e83464301a30 362 Gene3D G3DSA:3.40.50.300 3 246 2.7E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04630 d01ff89a1a90891c1ea8e83464301a30 362 SMART SM00382 27 214 1.9E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS04630 d01ff89a1a90891c1ea8e83464301a30 362 Pfam PF00005 ABC transporter 18 164 4.2E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS04630 d01ff89a1a90891c1ea8e83464301a30 362 SUPERFAMILY SSF50331 239 347 1.19E-11 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LK04_RS04630 d01ff89a1a90891c1ea8e83464301a30 362 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 5.0E-126 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 LK04_RS04630 d01ff89a1a90891c1ea8e83464301a30 362 PANTHER PTHR24220 4 289 9.6E-144 T 22-04-2016 LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 SUPERFAMILY SSF51658 1 278 5.11E-100 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 PANTHER PTHR21445:SF0 1 280 3.7E-154 T 22-04-2016 LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.462 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 Gene3D G3DSA:3.20.20.150 1 277 2.6E-116 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 4.7E-111 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 SMART SM00518 3 279 5.3E-134 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 PANTHER PTHR21445 1 280 3.7E-154 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 LK04_RS05775 170e39a702c6b992bdfb1690d3f4bbd8 281 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 1.4E-41 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS02770 2dca954fd953be452bf3c0c8e234a637 231 Pfam PF00563 EAL domain 6 220 2.5E-12 T 22-04-2016 IPR001633 EAL domain LK04_RS02770 2dca954fd953be452bf3c0c8e234a637 231 SUPERFAMILY SSF141868 5 220 4.18E-18 T 22-04-2016 IPR001633 EAL domain LK04_RS02770 2dca954fd953be452bf3c0c8e234a637 231 PANTHER PTHR33121:SF6 4 220 6.2E-33 T 22-04-2016 LK04_RS02770 2dca954fd953be452bf3c0c8e234a637 231 SMART SM00052 1 227 1.1E-4 T 22-04-2016 IPR001633 EAL domain LK04_RS02770 2dca954fd953be452bf3c0c8e234a637 231 PANTHER PTHR33121 4 220 6.2E-33 T 22-04-2016 LK04_RS02770 2dca954fd953be452bf3c0c8e234a637 231 Gene3D G3DSA:3.20.20.450 138 220 9.1E-15 T 22-04-2016 IPR001633 EAL domain LK04_RS05875 27ab5b3e172980875b63b784972e3c5e 230 Pfam PF04172 LrgB-like family 11 223 6.8E-76 T 22-04-2016 IPR007300 CidB/LrgB family LK04_RS05875 27ab5b3e172980875b63b784972e3c5e 230 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 1 225 2.4E-93 T 22-04-2016 IPR005261 Conserved hypothetical protein CHP00659 LK04_RS05875 27ab5b3e172980875b63b784972e3c5e 230 PANTHER PTHR30249 1 226 4.6E-104 T 22-04-2016 LK04_RS05875 27ab5b3e172980875b63b784972e3c5e 230 PANTHER PTHR30249:SF5 1 226 4.6E-104 T 22-04-2016 LK04_RS01935 b5ada9c17de261c38621df342e145766 207 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 28 205 6.5E-53 T 22-04-2016 IPR016476 SH3 domain protein LK04_RS01935 b5ada9c17de261c38621df342e145766 207 Pfam PF08239 Bacterial SH3 domain 36 86 8.8E-8 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type LK04_RS01935 b5ada9c17de261c38621df342e145766 207 PIRSF PIRSF006158 1 206 4.7E-71 T 22-04-2016 IPR016476 SH3 domain protein LK04_RS01935 b5ada9c17de261c38621df342e145766 207 SMART SM00287 24 90 3.8E-10 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type LK04_RS01935 b5ada9c17de261c38621df342e145766 207 PANTHER PTHR23164 1 207 1.5E-24 T 22-04-2016 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 4.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.5E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 Gene3D G3DSA:3.50.50.60 239 315 1.5E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 Gene3D G3DSA:3.50.50.60 4 119 9.8E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PANTHER PTHR22912 1 314 2.7E-165 T 22-04-2016 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.5E-122 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 3.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 Gene3D G3DSA:3.50.50.60 120 238 9.7E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 SUPERFAMILY SSF51905 1 314 1.04E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PANTHER PTHR22912:SF48 1 314 2.7E-165 T 22-04-2016 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.8E-41 T 22-04-2016 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 3.8E-41 T 22-04-2016 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.8E-41 T 22-04-2016 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.8E-41 T 22-04-2016 LK04_RS12145 54a58972c281bbc193c6c13f892c1680 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 3.8E-41 T 22-04-2016 LK04_RS02470 f96a61cf6ca315ca0b1c754ea4f6a07b 234 Gene3D G3DSA:1.10.3720.10 8 216 1.2E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02470 f96a61cf6ca315ca0b1c754ea4f6a07b 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 3.6E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02470 f96a61cf6ca315ca0b1c754ea4f6a07b 234 PANTHER PTHR30614 2 223 5.8E-54 T 22-04-2016 LK04_RS02470 f96a61cf6ca315ca0b1c754ea4f6a07b 234 SUPERFAMILY SSF161098 8 208 5.49E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02470 f96a61cf6ca315ca0b1c754ea4f6a07b 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 109 2.8E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS10340 93ab280a78d5191486498b341ccf8892 342 PANTHER PTHR30582:SF9 52 311 2.8E-129 T 22-04-2016 LK04_RS10340 93ab280a78d5191486498b341ccf8892 342 PANTHER PTHR30582 52 311 2.8E-129 T 22-04-2016 LK04_RS10340 93ab280a78d5191486498b341ccf8892 342 Pfam PF03734 L,D-transpeptidase catalytic domain 99 234 5.2E-21 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 LK04_RS10340 93ab280a78d5191486498b341ccf8892 342 SUPERFAMILY SSF141523 97 234 1.7E-30 T 22-04-2016 LK04_RS10340 93ab280a78d5191486498b341ccf8892 342 Gene3D G3DSA:2.40.440.10 92 236 7.1E-36 T 22-04-2016 LK04_RS01215 c6a70185b79ec7f8b82d1179e1f3f82d 481 PANTHER PTHR30624 9 481 4.0E-257 T 22-04-2016 LK04_RS01215 c6a70185b79ec7f8b82d1179e1f3f82d 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 4.9E-63 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS01215 c6a70185b79ec7f8b82d1179e1f3f82d 481 SUPERFAMILY SSF111283 19 480 1.28E-129 T 22-04-2016 LK04_RS01215 c6a70185b79ec7f8b82d1179e1f3f82d 481 PIRSF PIRSF004919 14 481 2.1E-147 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LK04_RS01215 c6a70185b79ec7f8b82d1179e1f3f82d 481 PANTHER PTHR30624:SF4 9 481 4.0E-257 T 22-04-2016 LK04_RS05560 6de9a09e5e803f552841204be5523152 552 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 44 533 1.1E-180 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 LK04_RS05560 6de9a09e5e803f552841204be5523152 552 Gene3D G3DSA:2.60.40.10 423 544 2.6E-34 T 22-04-2016 IPR013783 Immunoglobulin-like fold LK04_RS05560 6de9a09e5e803f552841204be5523152 552 Gene3D G3DSA:2.70.98.10 43 420 9.5E-158 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LK04_RS05560 6de9a09e5e803f552841204be5523152 552 PIRSF PIRSF006281 1 537 6.8E-197 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 LK04_RS05560 6de9a09e5e803f552841204be5523152 552 SUPERFAMILY SSF81296 422 536 4.2E-28 T 22-04-2016 IPR014756 Immunoglobulin E-set LK04_RS05560 6de9a09e5e803f552841204be5523152 552 PANTHER PTHR30504 1 550 0.0 T 22-04-2016 LK04_RS05560 6de9a09e5e803f552841204be5523152 552 SUPERFAMILY SSF74650 44 420 1.6E-142 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LK04_RS05560 6de9a09e5e803f552841204be5523152 552 PANTHER PTHR30504:SF3 1 550 0.0 T 22-04-2016 LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 PANTHER PTHR11472 17 621 1.5E-233 T 22-04-2016 LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 Gene3D G3DSA:3.40.50.300 12 117 7.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 Gene3D G3DSA:3.40.50.300 188 253 7.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 SMART SM00491 474 603 7.2E-50 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 PANTHER PTHR11472:SF37 17 621 1.5E-233 T 22-04-2016 LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 Gene3D G3DSA:3.40.50.300 454 599 1.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 SUPERFAMILY SSF52540 573 598 3.55E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 SUPERFAMILY SSF52540 477 542 3.55E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 SUPERFAMILY SSF52540 39 88 3.55E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 Pfam PF13307 Helicase C-terminal domain 460 616 1.1E-33 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 SMART SM00487 16 337 9.1E-5 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 SUPERFAMILY SSF52540 13 232 4.82E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07855 96826ff2db343cdace7dc0e5d9b24dcc 636 Pfam PF00270 DEAD/DEAH box helicase 28 82 9.4E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS10970 924f90a8f2d7cc6e5ae4f9c81d2f2b54 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 277 1.1E-45 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LK04_RS10970 924f90a8f2d7cc6e5ae4f9c81d2f2b54 312 PANTHER PTHR10996:SF114 1 310 1.2E-120 T 22-04-2016 LK04_RS10970 924f90a8f2d7cc6e5ae4f9c81d2f2b54 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 216 232 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LK04_RS10970 924f90a8f2d7cc6e5ae4f9c81d2f2b54 312 PANTHER PTHR10996 1 310 1.2E-120 T 22-04-2016 LK04_RS10970 924f90a8f2d7cc6e5ae4f9c81d2f2b54 312 SUPERFAMILY SSF51735 98 278 6.97E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10970 924f90a8f2d7cc6e5ae4f9c81d2f2b54 312 Gene3D G3DSA:3.40.50.720 97 277 3.0E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS04735 1511cdea0dd5f860ba0a6e2c3cc9ec4a 117 Pfam PF07037 Putative transcription regulator (DUF1323) 6 116 7.2E-42 T 22-04-2016 IPR010749 Protein of unknown function DUF1323 LK04_RS04735 1511cdea0dd5f860ba0a6e2c3cc9ec4a 117 SUPERFAMILY SSF46955 3 50 5.31E-12 T 22-04-2016 IPR009061 Putative DNA-binding domain LK04_RS04735 1511cdea0dd5f860ba0a6e2c3cc9ec4a 117 Gene3D G3DSA:1.10.10.10 2 59 3.2E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04735 1511cdea0dd5f860ba0a6e2c3cc9ec4a 117 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 116 2.0E-30 T 22-04-2016 IPR010749 Protein of unknown function DUF1323 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.062 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.2E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.2E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.2E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.6E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 SUPERFAMILY SSF47729 3 93 1.38E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 PANTHER PTHR33175:SF2 2 100 7.8E-57 T 22-04-2016 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 1.7E-54 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 PANTHER PTHR33175 2 100 7.8E-57 T 22-04-2016 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 Gene3D G3DSA:4.10.520.10 2 93 3.0E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LK04_RS10445 31e23d66c639f2de78b87b12ae8c2f9b 100 SMART SM00411 3 92 2.5E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 SUPERFAMILY SSF53474 2 272 7.24E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 Gene3D G3DSA:3.40.50.1820 2 271 4.8E-73 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.7E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.7E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 215 229 1.7E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 PANTHER PTHR10992 8 272 2.7E-106 T 22-04-2016 LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 PANTHER PTHR10992:SF859 8 272 2.7E-106 T 22-04-2016 LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 PRINTS PR00412 Epoxide hydrolase signature 47 62 1.2E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 PRINTS PR00412 Epoxide hydrolase signature 213 229 1.2E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 PRINTS PR00412 Epoxide hydrolase signature 247 269 1.2E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 PRINTS PR00412 Epoxide hydrolase signature 27 45 1.2E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS02530 ee7c2b84f8dd69af561a22a85a6b1739 273 Pfam PF00561 alpha/beta hydrolase fold 22 252 1.0E-26 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS04740 eba89782a975237e75cbb8edc66fb6c5 262 PANTHER PTHR30520 1 251 3.3E-89 T 22-04-2016 LK04_RS04740 eba89782a975237e75cbb8edc66fb6c5 262 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 161 171 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site LK04_RS04740 eba89782a975237e75cbb8edc66fb6c5 262 Pfam PF01226 Formate/nitrite transporter 8 248 5.6E-77 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LK04_RS04740 eba89782a975237e75cbb8edc66fb6c5 262 PANTHER PTHR30520:SF0 1 251 3.3E-89 T 22-04-2016 LK04_RS04740 eba89782a975237e75cbb8edc66fb6c5 262 Gene3D G3DSA:1.20.1080.10 24 252 2.8E-80 T 22-04-2016 IPR023271 Aquaporin-like LK04_RS19170 2befaeea69779ef10fa3bcc35d69c067 328 PANTHER PTHR39573 2 328 1.8E-171 T 22-04-2016 LK04_RS19170 2befaeea69779ef10fa3bcc35d69c067 328 Pfam PF01636 Phosphotransferase enzyme family 33 259 4.3E-42 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase LK04_RS19170 2befaeea69779ef10fa3bcc35d69c067 328 SUPERFAMILY SSF56112 6 325 1.41E-86 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS19170 2befaeea69779ef10fa3bcc35d69c067 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 44.742 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LK04_RS19170 2befaeea69779ef10fa3bcc35d69c067 328 Gene3D G3DSA:3.90.1200.10 107 325 5.6E-43 T 22-04-2016 LK04_RS19170 2befaeea69779ef10fa3bcc35d69c067 328 Gene3D G3DSA:3.30.200.20 36 106 9.1E-4 T 22-04-2016 LK04_RS19170 2befaeea69779ef10fa3bcc35d69c067 328 PANTHER PTHR39573:SF1 2 328 1.8E-171 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LK04_RS06565 64750a3c8d0e69952d04c784ac36d3c6 317 SUPERFAMILY SSF161098 95 299 3.92E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06565 64750a3c8d0e69952d04c784ac36d3c6 317 Gene3D G3DSA:1.10.3720.10 91 312 2.0E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06565 64750a3c8d0e69952d04c784ac36d3c6 317 PANTHER PTHR30465:SF24 5 317 1.6E-91 T 22-04-2016 LK04_RS06565 64750a3c8d0e69952d04c784ac36d3c6 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 316 9.0E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06565 64750a3c8d0e69952d04c784ac36d3c6 317 PANTHER PTHR30465 5 317 1.6E-91 T 22-04-2016 LK04_RS03290 c2c243598e35b1ab7cc319c7ab32aea3 268 PANTHER PTHR10953 197 265 1.4E-146 T 22-04-2016 LK04_RS03290 c2c243598e35b1ab7cc319c7ab32aea3 268 PANTHER PTHR10953 9 164 1.4E-146 T 22-04-2016 LK04_RS03290 c2c243598e35b1ab7cc319c7ab32aea3 268 PANTHER PTHR10953:SF159 197 265 1.4E-146 T 22-04-2016 LK04_RS03290 c2c243598e35b1ab7cc319c7ab32aea3 268 PANTHER PTHR10953:SF159 9 164 1.4E-146 T 22-04-2016 LK04_RS03290 c2c243598e35b1ab7cc319c7ab32aea3 268 SUPERFAMILY SSF69572 9 259 4.84E-65 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LK04_RS03290 c2c243598e35b1ab7cc319c7ab32aea3 268 Pfam PF00899 ThiF family 19 257 9.5E-40 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LK04_RS03290 c2c243598e35b1ab7cc319c7ab32aea3 268 Gene3D G3DSA:3.40.50.720 5 258 5.2E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13230 6fd8497ebcc8a1fed3a74e52894037ea 266 PANTHER PTHR11280 1 263 3.9E-180 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 LK04_RS13230 6fd8497ebcc8a1fed3a74e52894037ea 266 Gene3D G3DSA:3.40.50.1360 1 264 2.6E-113 T 22-04-2016 LK04_RS13230 6fd8497ebcc8a1fed3a74e52894037ea 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 232 8.5E-21 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 LK04_RS13230 6fd8497ebcc8a1fed3a74e52894037ea 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 4.4E-140 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 LK04_RS13230 6fd8497ebcc8a1fed3a74e52894037ea 266 SUPERFAMILY SSF100950 1 264 1.17E-104 T 22-04-2016 LK04_RS13230 6fd8497ebcc8a1fed3a74e52894037ea 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.736 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 LK04_RS13230 6fd8497ebcc8a1fed3a74e52894037ea 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 LK04_RS00090 20c68a2dfa6153b638eb674f2d5173d2 531 PIRSF PIRSF002741 13 525 4.9E-83 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS00090 20c68a2dfa6153b638eb674f2d5173d2 531 SUPERFAMILY SSF53850 31 529 1.99E-109 T 22-04-2016 LK04_RS00090 20c68a2dfa6153b638eb674f2d5173d2 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 443 3.9E-78 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS00090 20c68a2dfa6153b638eb674f2d5173d2 531 PANTHER PTHR30290 7 528 1.2E-98 T 22-04-2016 LK04_RS00090 20c68a2dfa6153b638eb674f2d5173d2 531 Gene3D G3DSA:3.90.76.10 43 206 5.5E-36 T 22-04-2016 LK04_RS00090 20c68a2dfa6153b638eb674f2d5173d2 531 Gene3D G3DSA:3.10.105.10 305 501 8.9E-46 T 22-04-2016 LK04_RS00090 20c68a2dfa6153b638eb674f2d5173d2 531 Gene3D G3DSA:3.40.190.10 207 304 3.8E-20 T 22-04-2016 LK04_RS04895 ccceedfd73dde1d1dd72a012c439f620 389 PANTHER PTHR30629:SF4 2 381 2.4E-81 T 22-04-2016 LK04_RS04895 ccceedfd73dde1d1dd72a012c439f620 389 Pfam PF13356 Domain of unknown function (DUF4102) 3 84 1.5E-11 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 LK04_RS04895 ccceedfd73dde1d1dd72a012c439f620 389 Gene3D G3DSA:1.10.150.130 95 180 1.3E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal LK04_RS04895 ccceedfd73dde1d1dd72a012c439f620 389 Gene3D G3DSA:1.10.443.10 201 373 1.4E-22 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LK04_RS04895 ccceedfd73dde1d1dd72a012c439f620 389 Pfam PF00589 Phage integrase family 202 364 2.7E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LK04_RS04895 ccceedfd73dde1d1dd72a012c439f620 389 SUPERFAMILY SSF56349 94 373 7.95E-43 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LK04_RS04895 ccceedfd73dde1d1dd72a012c439f620 389 PANTHER PTHR30629 2 381 2.4E-81 T 22-04-2016 LK04_RS07265 6299cc89b8dcf4cc42bea4fade39a537 258 SMART SM00332 1 233 2.4E-10 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS07265 6299cc89b8dcf4cc42bea4fade39a537 258 Gene3D G3DSA:3.60.40.10 2 234 2.4E-46 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS07265 6299cc89b8dcf4cc42bea4fade39a537 258 PANTHER PTHR13832:SF226 1 255 2.2E-28 T 22-04-2016 LK04_RS07265 6299cc89b8dcf4cc42bea4fade39a537 258 SMART SM00331 8 235 4.3E-7 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS07265 6299cc89b8dcf4cc42bea4fade39a537 258 Pfam PF13672 Protein phosphatase 2C 15 209 1.7E-13 T 22-04-2016 LK04_RS07265 6299cc89b8dcf4cc42bea4fade39a537 258 PANTHER PTHR13832 1 255 2.2E-28 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 LK04_RS07265 6299cc89b8dcf4cc42bea4fade39a537 258 SUPERFAMILY SSF81606 3 235 4.05E-43 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LK04_RS18985 b77e5157e98e3ee25132007c81d6e226 347 PANTHER PTHR30570:SF0 1 344 2.9E-129 T 22-04-2016 LK04_RS18985 b77e5157e98e3ee25132007c81d6e226 347 PANTHER PTHR30570 1 344 2.9E-129 T 22-04-2016 LK04_RS18985 b77e5157e98e3ee25132007c81d6e226 347 PIRSF PIRSF002756 1 338 1.0E-104 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 LK04_RS18985 b77e5157e98e3ee25132007c81d6e226 347 Pfam PF12849 PBP superfamily domain 25 306 8.0E-59 T 22-04-2016 IPR024370 PBP domain LK04_RS18985 b77e5157e98e3ee25132007c81d6e226 347 SUPERFAMILY SSF53850 28 339 4.35E-93 T 22-04-2016 LK04_RS18985 b77e5157e98e3ee25132007c81d6e226 347 Gene3D G3DSA:3.40.190.10 181 337 1.5E-29 T 22-04-2016 LK04_RS18985 b77e5157e98e3ee25132007c81d6e226 347 Gene3D G3DSA:3.40.190.10 28 177 1.7E-55 T 22-04-2016 LK04_RS18985 b77e5157e98e3ee25132007c81d6e226 347 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 1.6E-126 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 LK04_RS02625 559fa7d69740c000d5c6dd6acb35de71 333 SUPERFAMILY SSF81345 6 326 4.84E-85 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS02625 559fa7d69740c000d5c6dd6acb35de71 333 PANTHER PTHR30472:SF3 1 332 3.7E-135 T 22-04-2016 LK04_RS02625 559fa7d69740c000d5c6dd6acb35de71 333 PANTHER PTHR30472 1 332 3.7E-135 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS02625 559fa7d69740c000d5c6dd6acb35de71 333 Gene3D G3DSA:1.10.3470.10 6 330 7.2E-106 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS02625 559fa7d69740c000d5c6dd6acb35de71 333 Pfam PF01032 FecCD transport family 18 326 1.3E-93 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LK04_RS04425 d65fc7e0bafcb35e6bfa12a1e44c1722 343 Pfam PF06804 NlpB/DapX lipoprotein 40 340 6.2E-110 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein LK04_RS04425 d65fc7e0bafcb35e6bfa12a1e44c1722 343 PIRSF PIRSF026343 9 343 2.4E-119 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC LK04_RS04425 d65fc7e0bafcb35e6bfa12a1e44c1722 343 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 342 36.927 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 Gene3D G3DSA:3.30.200.20 19 105 1.1E-16 T 22-04-2016 LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 Gene3D G3DSA:1.10.510.10 106 294 1.4E-33 T 22-04-2016 LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 SUPERFAMILY SSF56112 13 311 6.34E-54 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 28 51 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 Pfam PF00069 Protein kinase domain 22 285 9.7E-33 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 PANTHER PTHR24362 82 315 3.6E-49 T 22-04-2016 LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 PANTHER PTHR24362 20 64 3.6E-49 T 22-04-2016 LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 PANTHER PTHR24362:SF160 82 315 3.6E-49 T 22-04-2016 LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 PANTHER PTHR24362:SF160 20 64 3.6E-49 T 22-04-2016 LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 SMART SM00219 22 294 2.5E-6 T 22-04-2016 IPR020635 Tyrosine-protein kinase, catalytic domain GO:0004713|GO:0006468 LK04_RS09275 3271ff880b0fc7fa0f1e8190ea9c9bc7 470 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 160 172 - T 22-04-2016 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 LK04_RS14695 6d33eb5a22d8f852cd1138ac70114aad 243 SUPERFAMILY SSF52540 3 236 4.75E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14695 6d33eb5a22d8f852cd1138ac70114aad 243 Pfam PF00005 ABC transporter 19 167 6.1E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS14695 6d33eb5a22d8f852cd1138ac70114aad 243 SMART SM00382 28 215 4.3E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS14695 6d33eb5a22d8f852cd1138ac70114aad 243 Gene3D G3DSA:3.40.50.300 1 238 2.8E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14695 6d33eb5a22d8f852cd1138ac70114aad 243 PANTHER PTHR24220:SF550 5 242 1.9E-153 T 22-04-2016 LK04_RS14695 6d33eb5a22d8f852cd1138ac70114aad 243 PIRSF PIRSF039085 1 243 1.7E-112 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS14695 6d33eb5a22d8f852cd1138ac70114aad 243 PANTHER PTHR24220 5 242 1.9E-153 T 22-04-2016 LK04_RS14695 6d33eb5a22d8f852cd1138ac70114aad 243 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS06090 ee7b463979efccfbaff9d9ac09e6b581 736 Gene3D G3DSA:2.170.14.10 47 148 3.7E-40 T 22-04-2016 IPR009093 Bacteriophage P22 tailspike, N-terminal GO:0009405 LK04_RS06090 ee7b463979efccfbaff9d9ac09e6b581 736 Gene3D G3DSA:2.160.20.10 240 520 2.1E-8 T 22-04-2016 IPR012334 Pectin lyase fold LK04_RS06090 ee7b463979efccfbaff9d9ac09e6b581 736 Pfam PF09008 Head binding 49 147 4.8E-14 T 22-04-2016 IPR009093 Bacteriophage P22 tailspike, N-terminal GO:0009405 LK04_RS06090 ee7b463979efccfbaff9d9ac09e6b581 736 SUPERFAMILY SSF51327 47 147 3.66E-21 T 22-04-2016 IPR009093 Bacteriophage P22 tailspike, N-terminal GO:0009405 LK04_RS06090 ee7b463979efccfbaff9d9ac09e6b581 736 SUPERFAMILY SSF51126 238 540 6.8E-9 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor LK04_RS12365 506d88f1d2e8412e390f767143d6e70a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 2.4E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12365 506d88f1d2e8412e390f767143d6e70a 306 PANTHER PTHR30465 1 305 4.3E-191 T 22-04-2016 LK04_RS12365 506d88f1d2e8412e390f767143d6e70a 306 Gene3D G3DSA:1.10.3720.10 87 301 1.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12365 506d88f1d2e8412e390f767143d6e70a 306 SUPERFAMILY SSF161098 90 289 2.62E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12365 506d88f1d2e8412e390f767143d6e70a 306 PANTHER PTHR30465:SF59 1 305 4.3E-191 T 22-04-2016 LK04_RS14880 fe2df4537537f935842facea29a36a12 87 SUPERFAMILY SSF101744 2 85 8.37E-27 T 22-04-2016 IPR023534 Rof/RNase P-like LK04_RS14880 fe2df4537537f935842facea29a36a12 87 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 82 3.7E-25 T 22-04-2016 IPR009778 Modulator of Rho-dependent transcription termination LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 Gene3D G3DSA:3.40.50.300 1 210 6.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 211 1.2E-75 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 PRINTS PR00094 Adenylate kinase signature 4 17 1.5E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 PRINTS PR00094 Adenylate kinase signature 156 171 1.5E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 PRINTS PR00094 Adenylate kinase signature 32 46 1.5E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 PRINTS PR00094 Adenylate kinase signature 81 97 1.5E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 PRINTS PR00094 Adenylate kinase signature 173 187 1.5E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.9E-15 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 PANTHER PTHR23359 1 213 2.5E-111 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.746 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 Pfam PF00406 Adenylate kinase 5 186 5.3E-60 T 22-04-2016 LK04_RS13780 7a33fe4d20fec0ec61d5cc1f71a2379f 214 SUPERFAMILY SSF52540 1 211 6.52E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 PANTHER PTHR30437 1 157 1.0E-71 T 22-04-2016 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 Gene3D G3DSA:1.10.287.180 1 75 9.3E-36 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.709 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.2E-59 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 2.6E-32 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 SUPERFAMILY SSF54534 82 157 2.35E-24 T 22-04-2016 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 Gene3D G3DSA:3.10.50.30 81 157 2.3E-31 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 2.7E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 SUPERFAMILY SSF46557 3 78 3.27E-29 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LK04_RS16455 e1808a6911042d7ce758b771b6e8c1f4 158 PIRSF PIRSF006092 1 158 7.2E-56 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 LK04_RS00805 59dd47ec1b2811d114d6da439612780a 72 Pfam PF04102 SlyX 7 72 1.1E-24 T 22-04-2016 IPR007236 SlyX LK04_RS00805 59dd47ec1b2811d114d6da439612780a 72 Gene3D G3DSA:1.20.5.300 2 52 8.6E-20 T 22-04-2016 LK04_RS00805 59dd47ec1b2811d114d6da439612780a 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.5 T 22-04-2016 IPR007236 SlyX LK04_RS00805 59dd47ec1b2811d114d6da439612780a 72 PANTHER PTHR36508 1 72 9.5E-25 T 22-04-2016 LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 PANTHER PTHR10366 2 334 4.8E-173 T 22-04-2016 LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 SUPERFAMILY SSF51735 1 333 4.06E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.1E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 2.7E-26 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 2.7E-26 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.7E-26 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 2.7E-26 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 Gene3D G3DSA:3.90.25.10 296 331 8.4E-21 T 22-04-2016 LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 Gene3D G3DSA:3.90.25.10 197 231 8.4E-21 T 22-04-2016 LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 PANTHER PTHR10366:SF77 2 334 4.8E-173 T 22-04-2016 LK04_RS08075 ac52133017bd969b72d6f1659fa5d373 334 Gene3D G3DSA:3.40.50.720 1 196 8.6E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 Gene3D G3DSA:3.40.190.10 92 177 3.0E-24 T 22-04-2016 LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 Gene3D G3DSA:1.10.10.10 3 85 6.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 Pfam PF03466 LysR substrate binding domain 88 289 1.5E-43 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 SUPERFAMILY SSF53850 89 292 7.24E-42 T 22-04-2016 LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 PANTHER PTHR30537 1 293 2.2E-99 T 22-04-2016 LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 Gene3D G3DSA:3.40.190.10 178 256 2.6E-14 T 22-04-2016 LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 SUPERFAMILY SSF46785 5 87 2.25E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS10775 b728fd20aaf53416bdd9efeda1143e99 293 PANTHER PTHR30537:SF5 1 293 2.2E-99 T 22-04-2016 LK04_RS10250 42e8e3bbd799a5e858e18781d85f6e7e 545 SUPERFAMILY SSF53649 237 530 1.64E-23 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LK04_RS10250 42e8e3bbd799a5e858e18781d85f6e7e 545 PANTHER PTHR30443 1 541 3.9E-258 T 22-04-2016 LK04_RS10250 42e8e3bbd799a5e858e18781d85f6e7e 545 Pfam PF00884 Sulfatase 237 525 3.2E-51 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LK04_RS10250 42e8e3bbd799a5e858e18781d85f6e7e 545 Gene3D G3DSA:3.40.720.10 320 532 1.4E-17 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LK04_RS10250 42e8e3bbd799a5e858e18781d85f6e7e 545 Pfam PF08019 Domain of unknown function (DUF1705) 57 208 1.2E-50 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 LK04_RS10250 42e8e3bbd799a5e858e18781d85f6e7e 545 PANTHER PTHR30443:SF0 1 541 3.9E-258 T 22-04-2016 LK04_RS12265 bccc4e77901aa9570ad79df13994cb7f 379 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS12265 bccc4e77901aa9570ad79df13994cb7f 379 Pfam PF00005 ABC transporter 38 179 6.8E-39 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12265 bccc4e77901aa9570ad79df13994cb7f 379 SUPERFAMILY SSF50331 255 377 4.42E-17 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LK04_RS12265 bccc4e77901aa9570ad79df13994cb7f 379 PANTHER PTHR24220 23 344 2.8E-201 T 22-04-2016 LK04_RS12265 bccc4e77901aa9570ad79df13994cb7f 379 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 52 377 2.3E-148 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 LK04_RS12265 bccc4e77901aa9570ad79df13994cb7f 379 SUPERFAMILY SSF52540 21 258 1.95E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12265 bccc4e77901aa9570ad79df13994cb7f 379 PANTHER PTHR24220:SF481 23 344 2.8E-201 T 22-04-2016 LK04_RS12265 bccc4e77901aa9570ad79df13994cb7f 379 SMART SM00382 46 229 2.1E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12265 bccc4e77901aa9570ad79df13994cb7f 379 Gene3D G3DSA:3.40.50.300 13 257 7.0E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12265 bccc4e77901aa9570ad79df13994cb7f 379 Pfam PF08402 TOBE domain 297 377 2.8E-21 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LK04_RS08030 a11de4b0f7632c0bd8a275ba0f93594e 268 SUPERFAMILY SSF56219 1 268 6.02E-88 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LK04_RS08030 a11de4b0f7632c0bd8a275ba0f93594e 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 3.5E-91 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 LK04_RS08030 a11de4b0f7632c0bd8a275ba0f93594e 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 259 9.9E-29 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LK04_RS08030 a11de4b0f7632c0bd8a275ba0f93594e 268 PANTHER PTHR22748:SF7 1 268 2.0E-135 T 22-04-2016 LK04_RS08030 a11de4b0f7632c0bd8a275ba0f93594e 268 PANTHER PTHR22748 1 268 2.0E-135 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 LK04_RS08030 a11de4b0f7632c0bd8a275ba0f93594e 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 LK04_RS08030 a11de4b0f7632c0bd8a275ba0f93594e 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 2.0E-106 T 22-04-2016 LK04_RS08030 a11de4b0f7632c0bd8a275ba0f93594e 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 LK04_RS08030 a11de4b0f7632c0bd8a275ba0f93594e 268 Gene3D G3DSA:3.60.10.10 1 267 6.3E-88 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 PANTHER PTHR12725 8 226 2.4E-49 T 22-04-2016 LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 PANTHER PTHR12725:SF57 8 226 2.4E-49 T 22-04-2016 LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 Gene3D G3DSA:1.10.150.240 17 89 7.0E-18 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 SUPERFAMILY SSF56784 5 224 3.34E-49 T 22-04-2016 IPR023214 HAD-like domain LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 197 6.0E-23 T 22-04-2016 IPR023214 HAD-like domain LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 Gene3D G3DSA:3.40.50.1000 90 225 1.6E-43 T 22-04-2016 IPR023214 HAD-like domain LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 4.05E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 4.05E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 186 199 4.05E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 4.05E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 191 1.3E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 97 197 2.1E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS15970 a6576454340a46f9b724d3d80fbacae1 227 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 7 222 1.7E-67 T 22-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 LK04_RS16010 7d20aba9a94192470567a65c08a54c5b 364 PANTHER PTHR10799 88 347 1.6E-23 T 22-04-2016 LK04_RS16010 7d20aba9a94192470567a65c08a54c5b 364 SUPERFAMILY SSF55073 196 350 1.33E-43 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS16010 7d20aba9a94192470567a65c08a54c5b 364 Gene3D G3DSA:3.30.70.270 193 351 1.5E-47 T 22-04-2016 LK04_RS16010 7d20aba9a94192470567a65c08a54c5b 364 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 190 348 1.5E-45 T 22-04-2016 IPR000160 GGDEF domain LK04_RS16010 7d20aba9a94192470567a65c08a54c5b 364 PANTHER PTHR10799:SF750 88 347 1.6E-23 T 22-04-2016 LK04_RS16010 7d20aba9a94192470567a65c08a54c5b 364 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 346 2.0E-46 T 22-04-2016 IPR000160 GGDEF domain LK04_RS16010 7d20aba9a94192470567a65c08a54c5b 364 SMART SM00267 180 350 2.0E-57 T 22-04-2016 IPR000160 GGDEF domain LK04_RS14600 9b7be6be6929f5b601816e96cb3ebcc0 332 PANTHER PTHR32196 3 332 2.0E-109 T 22-04-2016 LK04_RS14600 9b7be6be6929f5b601816e96cb3ebcc0 332 SUPERFAMILY SSF81345 21 243 2.75E-5 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LK04_RS14600 9b7be6be6929f5b601816e96cb3ebcc0 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 324 3.1E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS14600 9b7be6be6929f5b601816e96cb3ebcc0 332 PANTHER PTHR32196:SF21 3 332 2.0E-109 T 22-04-2016 LK04_RS15985 1f8aa9564ab5a90cf206bc41f74c9801 343 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS15985 1f8aa9564ab5a90cf206bc41f74c9801 343 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 8.7E-55 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS15985 1f8aa9564ab5a90cf206bc41f74c9801 343 SUPERFAMILY SSF53335 161 315 6.42E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS15985 1f8aa9564ab5a90cf206bc41f74c9801 343 Gene3D G3DSA:3.40.50.150 164 333 7.4E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS15985 1f8aa9564ab5a90cf206bc41f74c9801 343 Pfam PF05175 Methyltransferase small domain 167 333 1.1E-59 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LK04_RS15985 1f8aa9564ab5a90cf206bc41f74c9801 343 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 44.593 T 22-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LK04_RS15985 1f8aa9564ab5a90cf206bc41f74c9801 343 PANTHER PTHR18895 53 341 7.9E-148 T 22-04-2016 LK04_RS15985 1f8aa9564ab5a90cf206bc41f74c9801 343 PANTHER PTHR18895:SF70 53 341 7.9E-148 T 22-04-2016 LK04_RS16765 2d16bbb2968aede69f128a161e82d8a6 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 1.0E-150 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 LK04_RS16765 2d16bbb2968aede69f128a161e82d8a6 433 PIRSF PIRSF004539 1 433 1.4E-177 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 LK04_RS16765 2d16bbb2968aede69f128a161e82d8a6 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 2.6E-193 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 LK04_RS16765 2d16bbb2968aede69f128a161e82d8a6 433 PANTHER PTHR36106:SF2 1 433 4.1E-264 T 22-04-2016 LK04_RS16765 2d16bbb2968aede69f128a161e82d8a6 433 PANTHER PTHR36106 1 433 4.1E-264 T 22-04-2016 LK04_RS14740 d02cc1b8fb6c815bb507ac80e8902192 319 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 16 316 2.9E-158 T 22-04-2016 IPR017625 Putative urate catabolism protein LK04_RS14740 d02cc1b8fb6c815bb507ac80e8902192 319 Gene3D G3DSA:3.20.20.370 14 317 2.3E-102 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LK04_RS14740 d02cc1b8fb6c815bb507ac80e8902192 319 Pfam PF01522 Polysaccharide deacetylase 86 192 5.1E-11 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LK04_RS14740 d02cc1b8fb6c815bb507ac80e8902192 319 SUPERFAMILY SSF88713 15 315 2.42E-86 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LK04_RS14740 d02cc1b8fb6c815bb507ac80e8902192 319 PANTHER PTHR10587:SF72 21 314 3.2E-148 T 22-04-2016 LK04_RS14740 d02cc1b8fb6c815bb507ac80e8902192 319 PANTHER PTHR10587 21 314 3.2E-148 T 22-04-2016 LK04_RS02390 ede16c28811a1008ace4231d20043c29 179 PANTHER PTHR33420 2 179 1.5E-37 T 22-04-2016 LK04_RS02390 ede16c28811a1008ace4231d20043c29 179 PANTHER PTHR33420:SF7 2 179 1.5E-37 T 22-04-2016 LK04_RS02390 ede16c28811a1008ace4231d20043c29 179 SUPERFAMILY SSF49401 27 178 6.96E-32 T 22-04-2016 IPR008966 Adhesion domain LK04_RS02390 ede16c28811a1008ace4231d20043c29 179 Gene3D G3DSA:2.60.40.1090 26 178 2.5E-38 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LK04_RS05750 32f72cf59bec4fbc4c37f510e405dc2f 324 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 171 3.4E-40 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LK04_RS05750 32f72cf59bec4fbc4c37f510e405dc2f 324 PANTHER PTHR13748 1 323 7.6E-72 T 22-04-2016 LK04_RS05750 32f72cf59bec4fbc4c37f510e405dc2f 324 SUPERFAMILY SSF52540 4 161 1.06E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS05750 32f72cf59bec4fbc4c37f510e405dc2f 324 Gene3D G3DSA:3.40.50.300 2 194 1.0E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06870 2908e1ee999344464f5aa18f6c2a59a0 265 Gene3D G3DSA:3.30.980.20 90 171 2.0E-29 T 22-04-2016 LK04_RS06870 2908e1ee999344464f5aa18f6c2a59a0 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 223 5.9E-28 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LK04_RS06870 2908e1ee999344464f5aa18f6c2a59a0 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 225 1.2E-19 T 22-04-2016 IPR023214 HAD-like domain LK04_RS06870 2908e1ee999344464f5aa18f6c2a59a0 265 PANTHER PTHR10000:SF19 1 259 9.9E-54 T 22-04-2016 LK04_RS06870 2908e1ee999344464f5aa18f6c2a59a0 265 SUPERFAMILY SSF56784 8 225 4.52E-45 T 22-04-2016 IPR023214 HAD-like domain LK04_RS06870 2908e1ee999344464f5aa18f6c2a59a0 265 PANTHER PTHR10000 1 259 9.9E-54 T 22-04-2016 LK04_RS06870 2908e1ee999344464f5aa18f6c2a59a0 265 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 9 260 6.4E-75 T 22-04-2016 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 LK04_RS06870 2908e1ee999344464f5aa18f6c2a59a0 265 Gene3D G3DSA:3.40.50.1000 9 89 4.4E-38 T 22-04-2016 IPR023214 HAD-like domain LK04_RS06870 2908e1ee999344464f5aa18f6c2a59a0 265 Gene3D G3DSA:3.40.50.1000 172 257 4.4E-38 T 22-04-2016 IPR023214 HAD-like domain LK04_RS16925 26753d1a4b04b5c313b2eb3d6708b8e0 259 Gene3D G3DSA:3.20.20.150 5 256 2.1E-59 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS16925 26753d1a4b04b5c313b2eb3d6708b8e0 259 PIRSF PIRSF006241 2 258 3.3E-56 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 LK04_RS16925 26753d1a4b04b5c313b2eb3d6708b8e0 259 Pfam PF01261 Xylose isomerase-like TIM barrel 45 218 1.3E-17 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS16925 26753d1a4b04b5c313b2eb3d6708b8e0 259 SUPERFAMILY SSF51658 5 256 1.52E-54 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS16925 26753d1a4b04b5c313b2eb3d6708b8e0 259 PANTHER PTHR12110 1 239 4.7E-40 T 22-04-2016 LK04_RS07775 a9eb541b51269c92cfa91c0595c1dd27 78 Pfam PF13996 YobH-like protein 2 71 1.3E-38 T 22-04-2016 IPR025611 YobH-like protein LK04_RS17455 034f06af10505cff84cabde88e636e07 281 PANTHER PTHR32243:SF31 1 279 2.1E-135 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 LK04_RS17455 034f06af10505cff84cabde88e636e07 281 Gene3D G3DSA:1.10.3720.10 4 270 2.0E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17455 034f06af10505cff84cabde88e636e07 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 276 6.7E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17455 034f06af10505cff84cabde88e636e07 281 SUPERFAMILY SSF161098 4 278 6.17E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17455 034f06af10505cff84cabde88e636e07 281 PANTHER PTHR32243 1 279 2.1E-135 T 22-04-2016 LK04_RS12370 414faf26460046af3e410fbbbcc20e8e 511 SUPERFAMILY SSF53850 30 510 8.01E-142 T 22-04-2016 LK04_RS12370 414faf26460046af3e410fbbbcc20e8e 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 428 3.4E-95 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS12370 414faf26460046af3e410fbbbcc20e8e 511 PANTHER PTHR30290:SF32 4 511 4.1E-297 T 22-04-2016 LK04_RS12370 414faf26460046af3e410fbbbcc20e8e 511 Gene3D G3DSA:3.10.105.10 280 480 3.4E-59 T 22-04-2016 LK04_RS12370 414faf26460046af3e410fbbbcc20e8e 511 PIRSF PIRSF002741 21 511 1.5E-108 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS12370 414faf26460046af3e410fbbbcc20e8e 511 PANTHER PTHR30290 4 511 4.1E-297 T 22-04-2016 LK04_RS12370 414faf26460046af3e410fbbbcc20e8e 511 Gene3D G3DSA:3.40.190.10 131 279 1.2E-48 T 22-04-2016 LK04_RS09525 8fc4b58d625f16e1fce30d699320a2d6 194 PANTHER PTHR34406:SF1 1 192 5.7E-43 T 22-04-2016 LK04_RS09525 8fc4b58d625f16e1fce30d699320a2d6 194 PANTHER PTHR34406 1 192 5.7E-43 T 22-04-2016 LK04_RS09525 8fc4b58d625f16e1fce30d699320a2d6 194 Gene3D G3DSA:2.40.128.110 26 192 1.3E-52 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LK04_RS09525 8fc4b58d625f16e1fce30d699320a2d6 194 Pfam PF04264 YceI-like domain 29 191 7.7E-36 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LK04_RS09525 8fc4b58d625f16e1fce30d699320a2d6 194 SUPERFAMILY SSF101874 26 192 4.19E-47 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LK04_RS09525 8fc4b58d625f16e1fce30d699320a2d6 194 SMART SM00867 28 192 1.8E-56 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LK04_RS10455 e783c449fa2eda62b8dbeaa45402e92d 327 SUPERFAMILY SSF55681 92 327 7.46E-83 T 22-04-2016 LK04_RS10455 e783c449fa2eda62b8dbeaa45402e92d 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 4.7E-26 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LK04_RS10455 e783c449fa2eda62b8dbeaa45402e92d 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.574 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 LK04_RS10455 e783c449fa2eda62b8dbeaa45402e92d 327 SUPERFAMILY SSF46589 13 99 9.94E-22 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 LK04_RS10455 e783c449fa2eda62b8dbeaa45402e92d 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 1.0E-107 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 LK04_RS10455 e783c449fa2eda62b8dbeaa45402e92d 327 PANTHER PTHR11538 92 327 5.1E-119 T 22-04-2016 LK04_RS10455 e783c449fa2eda62b8dbeaa45402e92d 327 Gene3D G3DSA:3.30.930.10 10 327 3.0E-134 T 22-04-2016 LK04_RS10455 e783c449fa2eda62b8dbeaa45402e92d 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 1.0E-118 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LK04_RS09650 4f8e86cdd8801bbbcc8975906a4981ce 384 PANTHER PTHR30158 1 384 6.9E-173 T 22-04-2016 LK04_RS09650 4f8e86cdd8801bbbcc8975906a4981ce 384 Gene3D G3DSA:2.40.50.100 175 207 3.2E-23 T 22-04-2016 LK04_RS09650 4f8e86cdd8801bbbcc8975906a4981ce 384 Gene3D G3DSA:2.40.50.100 67 100 3.2E-23 T 22-04-2016 LK04_RS09650 4f8e86cdd8801bbbcc8975906a4981ce 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 375 2.2E-85 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS09650 4f8e86cdd8801bbbcc8975906a4981ce 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 293 3.6E-19 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS09650 4f8e86cdd8801bbbcc8975906a4981ce 384 SUPERFAMILY SSF111369 57 298 4.97E-72 T 22-04-2016 LK04_RS09650 4f8e86cdd8801bbbcc8975906a4981ce 384 PANTHER PTHR30158:SF2 1 384 6.9E-173 T 22-04-2016 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 Gene3D G3DSA:3.40.50.1260 5 175 2.1E-63 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 Gene3D G3DSA:3.40.50.1270 176 371 2.1E-72 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 Pfam PF00162 Phosphoglycerate kinase 6 373 2.2E-128 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PIRSF PIRSF000724 1 387 1.7E-125 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 SUPERFAMILY SSF53748 3 383 3.53E-136 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 8.9E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 133 155 8.9E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 8.9E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 8.9E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 8.9E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 105 120 8.9E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 187 206 8.9E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 8.9E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PRINTS PR00477 Phosphoglycerate kinase family signature 164 186 8.9E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 PANTHER PTHR11406 1 387 7.9E-182 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS02880 f71ff5952ca912636f84e7da30a7e0f0 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 37.696 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LK04_RS10425 a114d58f8fec63f7473445e4e240909d 248 Pfam PF00005 ABC transporter 15 161 1.6E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS10425 a114d58f8fec63f7473445e4e240909d 248 PANTHER PTHR24220:SF462 1 230 6.1E-76 T 22-04-2016 LK04_RS10425 a114d58f8fec63f7473445e4e240909d 248 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS10425 a114d58f8fec63f7473445e4e240909d 248 PANTHER PTHR24220 1 230 6.1E-76 T 22-04-2016 LK04_RS10425 a114d58f8fec63f7473445e4e240909d 248 SUPERFAMILY SSF52540 14 225 3.38E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10425 a114d58f8fec63f7473445e4e240909d 248 SMART SM00382 23 210 4.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS10425 a114d58f8fec63f7473445e4e240909d 248 Gene3D G3DSA:3.40.50.300 14 225 2.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12825 abffc07a3f8f11da2a24359e57de621d 235 PANTHER PTHR23291 1 235 8.6E-94 T 22-04-2016 IPR006214 Bax inhibitor 1-related LK04_RS12825 abffc07a3f8f11da2a24359e57de621d 235 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 231 3.1E-60 T 22-04-2016 LK04_RS12825 abffc07a3f8f11da2a24359e57de621d 235 PANTHER PTHR23291:SF42 1 235 8.6E-94 T 22-04-2016 LK04_RS14405 9e9e556095679eb576793af74a9cb98f 390 SUPERFAMILY SSF103473 3 383 1.06E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS14405 9e9e556095679eb576793af74a9cb98f 390 Gene3D G3DSA:1.20.1250.20 199 380 4.0E-18 T 22-04-2016 LK04_RS14405 9e9e556095679eb576793af74a9cb98f 390 PANTHER PTHR23523 13 389 9.2E-119 T 22-04-2016 LK04_RS14405 9e9e556095679eb576793af74a9cb98f 390 Pfam PF07690 Major Facilitator Superfamily 14 337 1.5E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS14405 9e9e556095679eb576793af74a9cb98f 390 PANTHER PTHR23523:SF1 13 389 9.2E-119 T 22-04-2016 LK04_RS14405 9e9e556095679eb576793af74a9cb98f 390 Gene3D G3DSA:1.20.1250.20 22 188 3.4E-12 T 22-04-2016 LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 SMART SM00448 2 114 2.1E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 SUPERFAMILY SSF46894 140 184 8.84E-9 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 185 5.7E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 Gene3D G3DSA:3.40.50.2300 1 116 5.8E-31 T 22-04-2016 LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 PANTHER PTHR26402 2 185 9.5E-49 T 22-04-2016 LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 SUPERFAMILY SSF52172 1 120 1.99E-31 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 PANTHER PTHR26402:SF151 2 185 9.5E-49 T 22-04-2016 LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 5.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 5.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 185 5.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 Gene3D G3DSA:1.10.10.10 117 184 8.7E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13525 3d164629eb55fad6a4e132c4fcbdb0ab 185 Pfam PF00072 Response regulator receiver domain 4 115 1.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS16445 2df9ea9f622cea433c8607327eef59c1 209 PIRSF PIRSF005461 1 209 1.3E-82 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 LK04_RS16445 2df9ea9f622cea433c8607327eef59c1 209 SUPERFAMILY SSF53335 31 207 4.22E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS16445 2df9ea9f622cea433c8607327eef59c1 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 1.4E-59 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 LK04_RS16445 2df9ea9f622cea433c8607327eef59c1 209 Gene3D G3DSA:3.40.50.150 1 208 5.2E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS16445 2df9ea9f622cea433c8607327eef59c1 209 PANTHER PTHR10920:SF20 1 208 2.2E-141 T 22-04-2016 LK04_RS16445 2df9ea9f622cea433c8607327eef59c1 209 PANTHER PTHR10920 1 208 2.2E-141 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 LK04_RS16445 2df9ea9f622cea433c8607327eef59c1 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 28.198 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 LK04_RS16445 2df9ea9f622cea433c8607327eef59c1 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 1.9E-93 T 22-04-2016 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 LK04_RS13995 e7ed97903d97e53969348857c359a96e 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 4.7E-55 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG LK04_RS02685 fc7f4dc5d41a1230ef325e4bbe6ff0f2 89 SUPERFAMILY SSF52794 1 87 2.22E-20 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS02685 fc7f4dc5d41a1230ef325e4bbe6ff0f2 89 Gene3D G3DSA:3.40.50.270 2 85 6.3E-12 T 22-04-2016 LK04_RS02685 fc7f4dc5d41a1230ef325e4bbe6ff0f2 89 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 82 2.9E-14 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LK04_RS02685 fc7f4dc5d41a1230ef325e4bbe6ff0f2 89 PANTHER PTHR33843 1 89 1.8E-30 T 22-04-2016 LK04_RS02685 fc7f4dc5d41a1230ef325e4bbe6ff0f2 89 PANTHER PTHR33843:SF2 1 89 1.8E-30 T 22-04-2016 LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 531 703 4.0E-11 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 Pfam PF13807 G-rich domain on putative tyrosine kinase 366 446 1.6E-33 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 510 714 4.3E-44 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 Pfam PF02706 Chain length determinant protein 19 251 2.7E-41 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 PANTHER PTHR32309:SF17 492 724 1.4E-274 T 22-04-2016 LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 PANTHER PTHR32309:SF17 1 122 1.4E-274 T 22-04-2016 LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 PANTHER PTHR32309:SF17 184 475 1.4E-274 T 22-04-2016 LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 Gene3D G3DSA:3.40.50.300 529 705 4.7E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 SUPERFAMILY SSF52540 528 705 6.77E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 PANTHER PTHR32309 492 724 1.4E-274 T 22-04-2016 LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 PANTHER PTHR32309 1 122 1.4E-274 T 22-04-2016 LK04_RS06070 3b8528c6d0717994b67fea0d663513d2 725 PANTHER PTHR32309 184 475 1.4E-274 T 22-04-2016 LK04_RS04770 e9b5070946aada8fa7e9e29697632387 362 Pfam PF00296 Luciferase-like monooxygenase 18 323 4.6E-77 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS04770 e9b5070946aada8fa7e9e29697632387 362 PANTHER PTHR30011:SF29 1 352 3.3E-161 T 22-04-2016 LK04_RS04770 e9b5070946aada8fa7e9e29697632387 362 PANTHER PTHR30011 1 352 3.3E-161 T 22-04-2016 LK04_RS04770 e9b5070946aada8fa7e9e29697632387 362 Gene3D G3DSA:3.20.20.30 283 355 4.2E-82 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS04770 e9b5070946aada8fa7e9e29697632387 362 Gene3D G3DSA:3.20.20.30 3 251 4.2E-82 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS04770 e9b5070946aada8fa7e9e29697632387 362 SUPERFAMILY SSF51679 19 353 3.97E-76 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS15655 c77dfd4a8f6a6feabf1039bbc0410c4f 317 SUPERFAMILY SSF51569 1 316 1.88E-116 T 22-04-2016 LK04_RS15655 c77dfd4a8f6a6feabf1039bbc0410c4f 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS15655 c77dfd4a8f6a6feabf1039bbc0410c4f 317 Gene3D G3DSA:3.20.20.70 3 316 2.3E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS15655 c77dfd4a8f6a6feabf1039bbc0410c4f 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS15655 c77dfd4a8f6a6feabf1039bbc0410c4f 317 PANTHER PTHR10683 1 317 7.0E-179 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS15655 c77dfd4a8f6a6feabf1039bbc0410c4f 317 PANTHER PTHR10683:SF18 1 317 7.0E-179 T 22-04-2016 LK04_RS15655 c77dfd4a8f6a6feabf1039bbc0410c4f 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 1.7E-164 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS15655 c77dfd4a8f6a6feabf1039bbc0410c4f 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.938 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS15655 c77dfd4a8f6a6feabf1039bbc0410c4f 317 Pfam PF00923 Transaldolase 14 313 4.0E-102 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LK04_RS04505 7004f095c17417dcbe9e23a42d124de9 143 PIRSF PIRSF006105 1 143 1.8E-51 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB LK04_RS04505 7004f095c17417dcbe9e23a42d124de9 143 Gene3D G3DSA:4.10.1020.10 56 123 3.2E-31 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain LK04_RS04505 7004f095c17417dcbe9e23a42d124de9 143 SUPERFAMILY SSF48695 43 138 2.1E-39 T 22-04-2016 IPR011031 Multihaem cytochrome LK04_RS04505 7004f095c17417dcbe9e23a42d124de9 143 PANTHER PTHR38604 8 143 9.6E-60 T 22-04-2016 LK04_RS04505 7004f095c17417dcbe9e23a42d124de9 143 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 137 3.7E-43 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB LK04_RS04505 7004f095c17417dcbe9e23a42d124de9 143 PANTHER PTHR38604:SF1 8 143 9.6E-60 T 22-04-2016 LK04_RS10335 4a88f0650b03fa2db0fea6b158e93957 78 Gene3D G3DSA:1.20.5.190 22 73 1.6E-24 T 22-04-2016 LK04_RS10335 4a88f0650b03fa2db0fea6b158e93957 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 1.3E-25 T 22-04-2016 IPR006817 Lipoprotein leucine-zipper GO:0019867 LK04_RS10335 4a88f0650b03fa2db0fea6b158e93957 78 PIRSF PIRSF002855 1 78 2.7E-30 T 22-04-2016 IPR016367 Murein-lipoprotein LK04_RS10335 4a88f0650b03fa2db0fea6b158e93957 78 PANTHER PTHR38763 1 78 4.8E-29 T 22-04-2016 LK04_RS10335 4a88f0650b03fa2db0fea6b158e93957 78 SUPERFAMILY SSF58042 24 73 7.72E-23 T 22-04-2016 LK04_RS00410 2fe13372569900041172ab5b8da49e93 254 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 25 205 7.0E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS00410 2fe13372569900041172ab5b8da49e93 254 Gene3D G3DSA:3.40.225.10 19 231 1.7E-63 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS00410 2fe13372569900041172ab5b8da49e93 254 SMART SM01007 24 205 1.9E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS00410 2fe13372569900041172ab5b8da49e93 254 PANTHER PTHR10672 15 249 2.8E-102 T 22-04-2016 LK04_RS00410 2fe13372569900041172ab5b8da49e93 254 SUPERFAMILY SSF53639 19 225 6.47E-63 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 SUPERFAMILY SSF51445 8 479 5.64E-161 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 443 455 1.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 418 435 1.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 383 1.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 407 1.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 309 323 1.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 Gene3D G3DSA:3.20.20.80 8 479 7.1E-150 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 375 383 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 Pfam PF00232 Glycosyl hydrolase family 1 8 478 1.2E-130 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 PANTHER PTHR10353 5 481 1.1E-232 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LK04_RS02990 1e5b6203e848471db2cfce44f3cf19e1 481 PANTHER PTHR10353:SF35 5 481 1.1E-232 T 22-04-2016 LK04_RS18085 18f435fb442b0647c9b6781259bb394f 853 Pfam PF12633 Adenylate cyclase NT domain 5 200 3.6E-79 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 LK04_RS18085 18f435fb442b0647c9b6781259bb394f 853 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 601 615 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 LK04_RS18085 18f435fb442b0647c9b6781259bb394f 853 PIRSF PIRSF001444 1 853 0.0 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 LK04_RS18085 18f435fb442b0647c9b6781259bb394f 853 Pfam PF01295 Adenylate cyclase, class-I 228 828 7.0E-260 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 LK04_RS18085 18f435fb442b0647c9b6781259bb394f 853 PANTHER PTHR38760 2 853 0.0 T 22-04-2016 LK04_RS18085 18f435fb442b0647c9b6781259bb394f 853 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 LK04_RS03075 af76651c65775c407297fa1032580e8f 216 SUPERFAMILY SSF161098 13 199 4.45E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03075 af76651c65775c407297fa1032580e8f 216 PANTHER PTHR30614 7 210 6.1E-62 T 22-04-2016 LK04_RS03075 af76651c65775c407297fa1032580e8f 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 2.1E-25 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS03075 af76651c65775c407297fa1032580e8f 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 209 4.1E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03075 af76651c65775c407297fa1032580e8f 216 Gene3D G3DSA:1.10.3720.10 12 213 1.0E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS04130 a62cb078a0fbffea89664e3413ee781d 327 PANTHER PTHR40659 1 327 1.2E-67 T 22-04-2016 LK04_RS04130 a62cb078a0fbffea89664e3413ee781d 327 Pfam PF03824 High-affinity nickel-transport protein 196 315 1.6E-16 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 LK04_RS04130 a62cb078a0fbffea89664e3413ee781d 327 Pfam PF03824 High-affinity nickel-transport protein 69 192 8.9E-26 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 SUPERFAMILY SSF90123 14 325 6.15E-75 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 SMART SM00382 368 555 5.1E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 Gene3D G3DSA:1.20.1560.10 13 325 2.5E-70 T 22-04-2016 LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 PANTHER PTHR24221:SF188 3 582 0.0 T 22-04-2016 LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 1.5E-264 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 PANTHER PTHR24221 3 582 0.0 T 22-04-2016 LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 SUPERFAMILY SSF52540 333 580 9.02E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 Gene3D G3DSA:3.40.50.300 342 574 2.9E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 Pfam PF00005 ABC transporter 359 509 2.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS12055 f1e363ac61eddb018320f261969836c9 582 Pfam PF00664 ABC transporter transmembrane region 27 297 2.0E-59 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 SMART SM00420 6 58 2.0E-11 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 PANTHER PTHR30363:SF13 1 242 3.0E-65 T 22-04-2016 LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 Pfam PF00455 DeoR C terminal sensor domain 74 236 1.7E-44 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 SUPERFAMILY SSF100950 74 236 4.34E-29 T 22-04-2016 LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 SMART SM01134 72 238 1.3E-57 T 22-04-2016 LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 Gene3D G3DSA:3.40.50.1360 74 227 6.2E-15 T 22-04-2016 LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 PANTHER PTHR30363 1 242 3.0E-65 T 22-04-2016 LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 SUPERFAMILY SSF46785 5 72 3.44E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 Gene3D G3DSA:1.10.10.10 1 48 1.2E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LK04_RS18495 d31460763a83d03d1a47fd5b288a95e0 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 6.7E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS05395 4bf490c73368ee457740e613945d57ba 260 PANTHER PTHR18966 26 253 3.6E-130 T 22-04-2016 LK04_RS05395 4bf490c73368ee457740e613945d57ba 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 6.8E-64 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS05395 4bf490c73368ee457740e613945d57ba 260 SMART SM00062 27 256 1.4E-78 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS05395 4bf490c73368ee457740e613945d57ba 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LK04_RS05395 4bf490c73368ee457740e613945d57ba 260 PANTHER PTHR18966:SF237 26 253 3.6E-130 T 22-04-2016 LK04_RS05395 4bf490c73368ee457740e613945d57ba 260 Gene3D G3DSA:3.40.190.10 115 212 9.5E-32 T 22-04-2016 LK04_RS05395 4bf490c73368ee457740e613945d57ba 260 SUPERFAMILY SSF53850 26 257 4.44E-68 T 22-04-2016 LK04_RS05395 4bf490c73368ee457740e613945d57ba 260 Gene3D G3DSA:3.40.190.10 26 113 3.5E-45 T 22-04-2016 LK04_RS05395 4bf490c73368ee457740e613945d57ba 260 Gene3D G3DSA:3.40.190.10 215 257 3.5E-45 T 22-04-2016 LK04_RS05395 4bf490c73368ee457740e613945d57ba 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 253 9.1E-98 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 LK04_RS19690 047520cbf48894b9c8216f23aaeb1a6d 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 2.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS19690 047520cbf48894b9c8216f23aaeb1a6d 214 PANTHER PTHR30055:SF39 1 207 1.8E-111 T 22-04-2016 LK04_RS19690 047520cbf48894b9c8216f23aaeb1a6d 214 Gene3D G3DSA:1.10.357.10 2 193 5.3E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS19690 047520cbf48894b9c8216f23aaeb1a6d 214 SUPERFAMILY SSF46689 3 77 2.08E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS19690 047520cbf48894b9c8216f23aaeb1a6d 214 PANTHER PTHR30055 1 207 1.8E-111 T 22-04-2016 LK04_RS07795 d323a58cda6158bb0f1b11831101f4e2 268 Pfam PF13847 Methyltransferase domain 85 199 1.2E-14 T 22-04-2016 IPR025714 Methyltransferase domain LK04_RS07795 d323a58cda6158bb0f1b11831101f4e2 268 PANTHER PTHR10108 18 266 3.4E-43 T 22-04-2016 LK04_RS07795 d323a58cda6158bb0f1b11831101f4e2 268 PIRSF PIRSF018249 1 268 4.0E-88 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 LK04_RS07795 d323a58cda6158bb0f1b11831101f4e2 268 PANTHER PTHR10108:SF886 18 266 3.4E-43 T 22-04-2016 LK04_RS07795 d323a58cda6158bb0f1b11831101f4e2 268 SUPERFAMILY SSF53335 5 252 1.55E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS07795 d323a58cda6158bb0f1b11831101f4e2 268 Gene3D G3DSA:3.40.50.150 69 248 3.0E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS19775 1d46db0c9979baad8c2c8346a02c8f64 85 Pfam PF13710 ACT domain 13 73 1.7E-27 T 22-04-2016 LK04_RS19775 1d46db0c9979baad8c2c8346a02c8f64 85 SUPERFAMILY SSF55021 3 75 1.53E-12 T 22-04-2016 LK04_RS19775 1d46db0c9979baad8c2c8346a02c8f64 85 Gene3D G3DSA:3.30.70.260 1 74 7.8E-13 T 22-04-2016 LK04_RS00675 cbea11dbe77452ba993ac2b1c08ad55f 267 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 20 250 4.1E-76 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LK04_RS00675 cbea11dbe77452ba993ac2b1c08ad55f 267 Pfam PF01226 Formate/nitrite transporter 16 247 1.4E-56 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LK04_RS00675 cbea11dbe77452ba993ac2b1c08ad55f 267 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site LK04_RS00675 cbea11dbe77452ba993ac2b1c08ad55f 267 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site LK04_RS00675 cbea11dbe77452ba993ac2b1c08ad55f 267 Gene3D G3DSA:1.20.1080.10 22 249 7.1E-61 T 22-04-2016 IPR023271 Aquaporin-like LK04_RS00675 cbea11dbe77452ba993ac2b1c08ad55f 267 PANTHER PTHR30520:SF5 3 259 3.7E-115 T 22-04-2016 LK04_RS00675 cbea11dbe77452ba993ac2b1c08ad55f 267 PANTHER PTHR30520 3 259 3.7E-115 T 22-04-2016 LK04_RS05690 21c35a1eafc4ff5b3b5289be13a35c8f 94 SUPERFAMILY SSF50715 1 93 3.49E-30 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 LK04_RS05690 21c35a1eafc4ff5b3b5289be13a35c8f 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 6.0E-40 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 LK04_RS05690 21c35a1eafc4ff5b3b5289be13a35c8f 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.087 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 LK04_RS05690 21c35a1eafc4ff5b3b5289be13a35c8f 94 Pfam PF01386 Ribosomal L25p family 5 91 2.7E-23 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 LK04_RS05690 21c35a1eafc4ff5b3b5289be13a35c8f 94 Gene3D G3DSA:2.40.240.10 2 93 8.8E-34 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 LK04_RS05690 21c35a1eafc4ff5b3b5289be13a35c8f 94 PANTHER PTHR33284 1 94 5.0E-39 T 22-04-2016 LK04_RS03780 1bb7e573861f7f803b8975169bad4990 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 43 346 7.5E-16 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS03780 1bb7e573861f7f803b8975169bad4990 390 SUPERFAMILY SSF111369 195 267 8.63E-8 T 22-04-2016 LK04_RS03780 1bb7e573861f7f803b8975169bad4990 390 PANTHER PTHR30386 1 376 5.6E-189 T 22-04-2016 LK04_RS03780 1bb7e573861f7f803b8975169bad4990 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 1.4E-135 T 22-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 LK04_RS03780 1bb7e573861f7f803b8975169bad4990 390 SUPERFAMILY SSF111369 56 112 5.62E-7 T 22-04-2016 LK04_RS03780 1bb7e573861f7f803b8975169bad4990 390 Gene3D G3DSA:2.40.50.100 60 94 1.2E-19 T 22-04-2016 LK04_RS03780 1bb7e573861f7f803b8975169bad4990 390 Gene3D G3DSA:2.40.50.100 215 248 1.2E-19 T 22-04-2016 LK04_RS03780 1bb7e573861f7f803b8975169bad4990 390 PANTHER PTHR30386:SF6 1 376 5.6E-189 T 22-04-2016 LK04_RS03780 1bb7e573861f7f803b8975169bad4990 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 4.2E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS10570 9173fc2b274a381e82e08aeae0935022 343 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 336 9.7E-140 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 LK04_RS10570 9173fc2b274a381e82e08aeae0935022 343 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 336 2.6E-150 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 LK04_RS10570 9173fc2b274a381e82e08aeae0935022 343 SUPERFAMILY SSF55729 1 336 3.27E-128 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS10570 9173fc2b274a381e82e08aeae0935022 343 Gene3D G3DSA:3.40.630.30 114 132 9.5E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS10570 9173fc2b274a381e82e08aeae0935022 343 Gene3D G3DSA:3.40.630.30 1 79 9.5E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS10570 9173fc2b274a381e82e08aeae0935022 343 Gene3D G3DSA:2.40.40.20 275 336 3.8E-8 T 22-04-2016 LK04_RS10570 9173fc2b274a381e82e08aeae0935022 343 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 334 8.5E-139 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 LK04_RS10570 9173fc2b274a381e82e08aeae0935022 343 PANTHER PTHR30420 1 343 5.1E-183 T 22-04-2016 LK04_RS10570 9173fc2b274a381e82e08aeae0935022 343 PANTHER PTHR30420:SF1 1 343 5.1E-183 T 22-04-2016 LK04_RS09205 72a415acf5121c4fa881ec0f9b5f95b2 408 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 19 226 4.0E-66 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU LK04_RS09205 72a415acf5121c4fa881ec0f9b5f95b2 408 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 258 392 1.8E-50 T 22-04-2016 IPR017733 Type VI secretion system peptidoglycan-associated domain LK04_RS09205 72a415acf5121c4fa881ec0f9b5f95b2 408 Pfam PF00691 OmpA family 289 387 4.7E-17 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS09205 72a415acf5121c4fa881ec0f9b5f95b2 408 PANTHER PTHR30329 79 157 3.1E-75 T 22-04-2016 LK04_RS09205 72a415acf5121c4fa881ec0f9b5f95b2 408 PANTHER PTHR30329 200 394 3.1E-75 T 22-04-2016 LK04_RS09205 72a415acf5121c4fa881ec0f9b5f95b2 408 Gene3D G3DSA:3.30.1330.60 266 393 8.6E-31 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS09205 72a415acf5121c4fa881ec0f9b5f95b2 408 Pfam PF09850 Type VI secretion system protein DotU 20 222 1.7E-67 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU LK04_RS09205 72a415acf5121c4fa881ec0f9b5f95b2 408 PANTHER PTHR30329:SF7 79 157 3.1E-75 T 22-04-2016 LK04_RS09205 72a415acf5121c4fa881ec0f9b5f95b2 408 PANTHER PTHR30329:SF7 200 394 3.1E-75 T 22-04-2016 LK04_RS09205 72a415acf5121c4fa881ec0f9b5f95b2 408 SUPERFAMILY SSF103088 261 393 8.63E-29 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS18345 c7e2de5b396920e9024fd1e8958dfc76 339 Gene3D G3DSA:1.10.3720.10 203 332 2.1E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18345 c7e2de5b396920e9024fd1e8958dfc76 339 Gene3D G3DSA:1.10.3720.10 87 163 2.1E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18345 c7e2de5b396920e9024fd1e8958dfc76 339 SUPERFAMILY SSF161098 89 160 8.34E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18345 c7e2de5b396920e9024fd1e8958dfc76 339 SUPERFAMILY SSF161098 200 323 8.34E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18345 c7e2de5b396920e9024fd1e8958dfc76 339 PANTHER PTHR30465:SF0 194 337 2.0E-152 T 22-04-2016 LK04_RS18345 c7e2de5b396920e9024fd1e8958dfc76 339 PANTHER PTHR30465:SF0 1 169 2.0E-152 T 22-04-2016 LK04_RS18345 c7e2de5b396920e9024fd1e8958dfc76 339 PANTHER PTHR30465 194 337 2.0E-152 T 22-04-2016 LK04_RS18345 c7e2de5b396920e9024fd1e8958dfc76 339 PANTHER PTHR30465 1 169 2.0E-152 T 22-04-2016 LK04_RS18345 c7e2de5b396920e9024fd1e8958dfc76 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 3.3E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00895 ef60084d4ab75224e55fb55171f7211f 110 SUPERFAMILY SSF54843 1 109 6.15E-43 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LK04_RS00895 ef60084d4ab75224e55fb55171f7211f 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 5.8E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LK04_RS00895 ef60084d4ab75224e55fb55171f7211f 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 5.0E-51 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 LK04_RS00895 ef60084d4ab75224e55fb55171f7211f 110 Gene3D G3DSA:3.90.470.10 1 109 3.6E-43 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LK04_RS00895 ef60084d4ab75224e55fb55171f7211f 110 PANTHER PTHR13501 1 109 4.4E-54 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 LK04_RS00895 ef60084d4ab75224e55fb55171f7211f 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.993 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 LK04_RS00895 ef60084d4ab75224e55fb55171f7211f 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS18740 27c6f762f5059bfdf2e34e79c0e85cbd 82 Gene3D G3DSA:1.10.260.40 5 65 1.4E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS18740 27c6f762f5059bfdf2e34e79c0e85cbd 82 Pfam PF01381 Helix-turn-helix 13 65 7.6E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS18740 27c6f762f5059bfdf2e34e79c0e85cbd 82 SUPERFAMILY SSF47413 7 72 2.69E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS18740 27c6f762f5059bfdf2e34e79c0e85cbd 82 SMART SM00530 12 67 1.8E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS15025 123d933767239746b60a758d4cca6025 482 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 480 7.6E-164 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 LK04_RS15025 123d933767239746b60a758d4cca6025 482 Pfam PF13180 PDZ domain 297 386 4.1E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS15025 123d933767239746b60a758d4cca6025 482 SUPERFAMILY SSF50156 413 478 4.6E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS15025 123d933767239746b60a758d4cca6025 482 Gene3D G3DSA:2.40.10.10 37 183 5.2E-37 T 22-04-2016 LK04_RS15025 123d933767239746b60a758d4cca6025 482 Pfam PF13365 Trypsin-like peptidase domain 120 256 3.0E-34 T 22-04-2016 LK04_RS15025 123d933767239746b60a758d4cca6025 482 SMART SM00228 399 474 3.8E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS15025 123d933767239746b60a758d4cca6025 482 SMART SM00228 295 377 1.5E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS15025 123d933767239746b60a758d4cca6025 482 SUPERFAMILY SSF50156 253 378 3.15E-22 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PANTHER PTHR22939:SF84 6 60 4.8E-247 T 22-04-2016 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PANTHER PTHR22939:SF84 80 88 4.8E-247 T 22-04-2016 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PANTHER PTHR22939:SF84 111 424 4.8E-247 T 22-04-2016 LK04_RS15025 123d933767239746b60a758d4cca6025 482 Gene3D G3DSA:2.40.10.10 184 296 1.1E-43 T 22-04-2016 LK04_RS15025 123d933767239746b60a758d4cca6025 482 Gene3D G3DSA:2.30.42.10 414 479 8.1E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS15025 123d933767239746b60a758d4cca6025 482 SUPERFAMILY SSF50494 109 291 9.81E-65 T 22-04-2016 IPR009003 Peptidase S1, PA clan LK04_RS15025 123d933767239746b60a758d4cca6025 482 SUPERFAMILY SSF50494 37 61 9.81E-65 T 22-04-2016 IPR009003 Peptidase S1, PA clan LK04_RS15025 123d933767239746b60a758d4cca6025 482 Gene3D G3DSA:2.30.42.10 297 394 3.2E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PRINTS PR00834 HtrA/DegQ protease family signature 151 171 3.6E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PRINTS PR00834 HtrA/DegQ protease family signature 335 347 3.6E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PRINTS PR00834 HtrA/DegQ protease family signature 249 266 3.6E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 3.6E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PRINTS PR00834 HtrA/DegQ protease family signature 130 142 3.6E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 3.6E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PANTHER PTHR22939 6 60 4.8E-247 T 22-04-2016 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PANTHER PTHR22939 80 88 4.8E-247 T 22-04-2016 LK04_RS15025 123d933767239746b60a758d4cca6025 482 PANTHER PTHR22939 111 424 4.8E-247 T 22-04-2016 LK04_RS15025 123d933767239746b60a758d4cca6025 482 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 403 471 1.0E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS17265 ef7f7d72068b5900ec5db29233611021 183 Pfam PF00436 Single-strand binding protein family 6 112 9.9E-43 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 LK04_RS17265 ef7f7d72068b5900ec5db29233611021 183 Gene3D G3DSA:2.40.50.140 4 183 3.2E-56 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS17265 ef7f7d72068b5900ec5db29233611021 183 PANTHER PTHR10302 4 183 9.2E-53 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LK04_RS17265 ef7f7d72068b5900ec5db29233611021 183 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 39.58 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LK04_RS17265 ef7f7d72068b5900ec5db29233611021 183 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 183 4.1E-61 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LK04_RS17265 ef7f7d72068b5900ec5db29233611021 183 SUPERFAMILY SSF50249 4 183 3.12E-61 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS18260 9adb3cf4b506d5c39a5b7707ed71ca70 62 Pfam PF11120 Cellulose biosynthesis protein BcsF 1 59 1.1E-23 T 22-04-2016 IPR019995 Cellulose biosynthesis, BcsF/YhjT LK04_RS01880 51627c9e24e78cbc63a3435b988da311 195 PANTHER PTHR30328 6 184 1.3E-37 T 22-04-2016 LK04_RS01880 51627c9e24e78cbc63a3435b988da311 195 SUPERFAMILY SSF46689 6 75 1.18E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS01880 51627c9e24e78cbc63a3435b988da311 195 Gene3D G3DSA:1.10.10.60 7 58 2.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS01880 51627c9e24e78cbc63a3435b988da311 195 SUPERFAMILY SSF48498 79 186 2.99E-23 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LK04_RS01880 51627c9e24e78cbc63a3435b988da311 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 9.6E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS01880 51627c9e24e78cbc63a3435b988da311 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 9.6E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS01880 51627c9e24e78cbc63a3435b988da311 195 PANTHER PTHR30328:SF18 6 184 1.3E-37 T 22-04-2016 LK04_RS01880 51627c9e24e78cbc63a3435b988da311 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 2.2E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS01880 51627c9e24e78cbc63a3435b988da311 195 Gene3D G3DSA:1.10.357.10 59 186 1.0E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 SUPERFAMILY SSF50331 238 356 7.53E-27 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 Gene3D G3DSA:3.40.50.300 4 235 1.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 Gene3D G3DSA:2.40.50.140 283 341 1.2E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 Pfam PF08402 TOBE domain 278 348 9.4E-11 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 SMART SM00382 29 326 1.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 SUPERFAMILY SSF52540 4 242 2.24E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 Pfam PF00005 ABC transporter 21 162 7.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 PANTHER PTHR24220 5 291 6.6E-165 T 22-04-2016 LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 PANTHER PTHR24220:SF151 5 291 6.6E-165 T 22-04-2016 LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 Gene3D G3DSA:2.40.50.100 342 356 8.0E-7 T 22-04-2016 LK04_RS17450 f1c51d2b7b29448dd044333013814f71 357 Gene3D G3DSA:2.40.50.100 240 282 8.0E-7 T 22-04-2016 LK04_RS12400 802cc099c3880a7133d73d97684c17ba 133 SMART SM00528 85 132 1.5E-24 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 LK04_RS12400 802cc099c3880a7133d73d97684c17ba 133 Gene3D G3DSA:1.10.287.1050 1 58 1.2E-27 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 LK04_RS12400 802cc099c3880a7133d73d97684c17ba 133 PIRSF PIRSF002096 1 132 3.0E-54 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 LK04_RS12400 802cc099c3880a7133d73d97684c17ba 133 Gene3D G3DSA:4.10.430.10 89 132 9.9E-26 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 LK04_RS12400 802cc099c3880a7133d73d97684c17ba 133 PANTHER PTHR38097 2 133 2.9E-66 T 22-04-2016 LK04_RS12400 802cc099c3880a7133d73d97684c17ba 133 SUPERFAMILY SSF81273 90 132 2.86E-11 T 22-04-2016 LK04_RS12400 802cc099c3880a7133d73d97684c17ba 133 Pfam PF00816 H-NS histone family 38 126 1.2E-20 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 LK04_RS12400 802cc099c3880a7133d73d97684c17ba 133 SUPERFAMILY SSF81273 2 58 7.85E-17 T 22-04-2016 LK04_RS12400 802cc099c3880a7133d73d97684c17ba 133 PANTHER PTHR38097:SF1 2 133 2.9E-66 T 22-04-2016 LK04_RS14705 b612cdddc1e7408abbc28cd0e8480e9f 222 Gene3D G3DSA:1.10.3720.10 12 215 2.0E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14705 b612cdddc1e7408abbc28cd0e8480e9f 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 6.9E-28 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS14705 b612cdddc1e7408abbc28cd0e8480e9f 222 PANTHER PTHR30614:SF18 4 222 4.7E-92 T 22-04-2016 LK04_RS14705 b612cdddc1e7408abbc28cd0e8480e9f 222 PANTHER PTHR30614 4 222 4.7E-92 T 22-04-2016 LK04_RS14705 b612cdddc1e7408abbc28cd0e8480e9f 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 1.9E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS14705 b612cdddc1e7408abbc28cd0e8480e9f 222 SUPERFAMILY SSF161098 14 203 8.76E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12935 9fc2b975d7e40f0c086abe06f0ccf16f 490 SUPERFAMILY SSF52540 258 476 9.94E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12935 9fc2b975d7e40f0c086abe06f0ccf16f 490 Gene3D G3DSA:3.40.50.300 11 226 7.8E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12935 9fc2b975d7e40f0c086abe06f0ccf16f 490 SUPERFAMILY SSF52540 6 225 1.46E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12935 9fc2b975d7e40f0c086abe06f0ccf16f 490 Pfam PF00005 ABC transporter 23 163 1.6E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12935 9fc2b975d7e40f0c086abe06f0ccf16f 490 Pfam PF00005 ABC transporter 277 429 1.8E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12935 9fc2b975d7e40f0c086abe06f0ccf16f 490 PANTHER PTHR24220:SF557 3 384 1.9E-178 T 22-04-2016 LK04_RS12935 9fc2b975d7e40f0c086abe06f0ccf16f 490 SMART SM00382 285 479 6.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12935 9fc2b975d7e40f0c086abe06f0ccf16f 490 SMART SM00382 28 237 1.7E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12935 9fc2b975d7e40f0c086abe06f0ccf16f 490 PANTHER PTHR24220 3 384 1.9E-178 T 22-04-2016 LK04_RS12935 9fc2b975d7e40f0c086abe06f0ccf16f 490 Gene3D G3DSA:3.40.50.300 256 468 1.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15485 6915d812445614ab37a4971c74fcf14c 201 PANTHER PTHR11670 1 201 2.7E-111 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15485 6915d812445614ab37a4971c74fcf14c 201 Pfam PF00694 Aconitase C-terminal domain 3 126 3.6E-38 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15485 6915d812445614ab37a4971c74fcf14c 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 4 189 1.6E-94 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15485 6915d812445614ab37a4971c74fcf14c 201 Gene3D G3DSA:3.20.19.10 4 196 2.9E-47 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LK04_RS15485 6915d812445614ab37a4971c74fcf14c 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 43.448 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LK04_RS15485 6915d812445614ab37a4971c74fcf14c 201 SUPERFAMILY SSF52016 3 194 6.28E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LK04_RS15485 6915d812445614ab37a4971c74fcf14c 201 PANTHER PTHR11670:SF27 1 201 2.7E-111 T 22-04-2016 LK04_RS05710 f3f5208379c51e115ffd1f75efbd1e19 108 Pfam PF13989 YejG-like protein 2 105 2.0E-43 T 22-04-2016 IPR020489 Uncharacterised protein family YejG LK04_RS05710 f3f5208379c51e115ffd1f75efbd1e19 108 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 2 108 6.0E-25 T 22-04-2016 IPR020489 Uncharacterised protein family YejG LK04_RS04390 e5a06833e7756cfed4381970340570dd 329 SUPERFAMILY SSF50331 251 326 3.0E-6 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LK04_RS04390 e5a06833e7756cfed4381970340570dd 329 Pfam PF00005 ABC transporter 23 166 1.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS04390 e5a06833e7756cfed4381970340570dd 329 PANTHER PTHR24220 9 246 3.7E-115 T 22-04-2016 LK04_RS04390 e5a06833e7756cfed4381970340570dd 329 SUPERFAMILY SSF52540 8 247 1.63E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04390 e5a06833e7756cfed4381970340570dd 329 SMART SM00382 32 216 6.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS04390 e5a06833e7756cfed4381970340570dd 329 Gene3D G3DSA:3.40.50.300 4 245 4.2E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS04390 e5a06833e7756cfed4381970340570dd 329 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS04390 e5a06833e7756cfed4381970340570dd 329 PANTHER PTHR24220:SF150 9 246 3.7E-115 T 22-04-2016 LK04_RS09770 2fa1a44541ca637c3c10181fe0a63436 234 Pfam PF05100 Phage minor tail protein L 30 232 4.1E-72 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail LK04_RS09770 2fa1a44541ca637c3c10181fe0a63436 234 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 232 3.7E-71 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 81 96 6.9E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 407 6.9E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 457 486 6.9E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 26 51 6.9E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 6.9E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 PANTHER PTHR32089 158 174 1.3E-48 T 22-04-2016 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 PANTHER PTHR32089 201 532 1.3E-48 T 22-04-2016 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 Pfam PF02203 Tar ligand binding domain homologue 27 177 2.3E-21 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 SMART SM00283 282 529 7.7E-28 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 Pfam PF00672 HAMP domain 208 278 6.2E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 SUPERFAMILY SSF47170 49 185 1.44E-25 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 Gene3D G3DSA:1.10.287.950 297 500 2.4E-35 T 22-04-2016 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 SUPERFAMILY SSF58104 260 530 6.67E-40 T 22-04-2016 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 SMART SM00319 65 190 6.3E-5 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 528 1.2E-31 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS06830 a290c7787aa381fc2ff4b6b90acf4c02 533 Gene3D G3DSA:1.20.120.30 57 189 3.2E-26 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LK04_RS19195 58562e1f49f3a7a3a9b82044122fce63 457 Gene3D G3DSA:3.80.30.20 53 270 2.5E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe LK04_RS19195 58562e1f49f3a7a3a9b82044122fce63 457 SMART SM00729 52 272 1.1E-56 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LK04_RS19195 58562e1f49f3a7a3a9b82044122fce63 457 Pfam PF06969 HemN C-terminal domain 363 430 3.3E-10 T 22-04-2016 IPR010723 HemN, C-terminal LK04_RS19195 58562e1f49f3a7a3a9b82044122fce63 457 PANTHER PTHR13932:SF6 1 451 1.5E-260 T 22-04-2016 LK04_RS19195 58562e1f49f3a7a3a9b82044122fce63 457 PIRSF PIRSF000167 3 454 1.9E-174 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 LK04_RS19195 58562e1f49f3a7a3a9b82044122fce63 457 SUPERFAMILY SSF102114 6 444 2.49E-146 T 22-04-2016 LK04_RS19195 58562e1f49f3a7a3a9b82044122fce63 457 PANTHER PTHR13932 1 451 1.5E-260 T 22-04-2016 LK04_RS19195 58562e1f49f3a7a3a9b82044122fce63 457 Pfam PF04055 Radical SAM superfamily 57 226 3.4E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LK04_RS19195 58562e1f49f3a7a3a9b82044122fce63 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 5.2E-216 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 LK04_RS19055 0402320ec86e037cbd0d2386d8629f41 146 Gene3D G3DSA:3.40.50.360 1 144 1.8E-38 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS19055 0402320ec86e037cbd0d2386d8629f41 146 PANTHER PTHR19384 1 146 8.4E-55 T 22-04-2016 LK04_RS19055 0402320ec86e037cbd0d2386d8629f41 146 SUPERFAMILY SSF52218 1 145 1.69E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS19055 0402320ec86e037cbd0d2386d8629f41 146 Pfam PF00258 Flavodoxin 7 135 3.7E-28 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LK04_RS19055 0402320ec86e037cbd0d2386d8629f41 146 PANTHER PTHR19384:SF81 1 146 8.4E-55 T 22-04-2016 LK04_RS19055 0402320ec86e037cbd0d2386d8629f41 146 PRINTS PR00369 Flavodoxin signature 5 18 1.4E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS19055 0402320ec86e037cbd0d2386d8629f41 146 PRINTS PR00369 Flavodoxin signature 51 62 1.4E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS19055 0402320ec86e037cbd0d2386d8629f41 146 PRINTS PR00369 Flavodoxin signature 82 92 1.4E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS19055 0402320ec86e037cbd0d2386d8629f41 146 PRINTS PR00369 Flavodoxin signature 106 125 1.4E-9 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 506 2.6E-168 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PRINTS PR01806 Virulence factor MviN signature 133 157 1.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PRINTS PR01806 Virulence factor MviN signature 157 178 1.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PRINTS PR01806 Virulence factor MviN signature 33 52 1.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PRINTS PR01806 Virulence factor MviN signature 409 426 1.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PRINTS PR01806 Virulence factor MviN signature 259 285 1.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PRINTS PR01806 Virulence factor MviN signature 52 68 1.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PRINTS PR01806 Virulence factor MviN signature 357 376 1.2E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PANTHER PTHR11206 217 442 6.5E-103 T 22-04-2016 LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PANTHER PTHR11206 469 487 6.5E-103 T 22-04-2016 LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PANTHER PTHR11206 70 82 6.5E-103 T 22-04-2016 LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PANTHER PTHR11206:SF90 217 442 6.5E-103 T 22-04-2016 LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PANTHER PTHR11206:SF90 469 487 6.5E-103 T 22-04-2016 LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PANTHER PTHR11206:SF90 70 82 6.5E-103 T 22-04-2016 LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 PIRSF PIRSF002869 1 511 2.7E-178 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LK04_RS11420 5f3f26f60092041200da7d779deb35f6 512 Pfam PF03023 MviN-like protein 28 478 8.8E-153 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LK04_RS01210 d0fe1e123e740aaccd90935d9a7aac17 1271 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1267 0.0 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 LK04_RS01210 d0fe1e123e740aaccd90935d9a7aac17 1271 Pfam PF13116 Protein of unknown function 506 787 4.0E-97 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 LK04_RS01210 d0fe1e123e740aaccd90935d9a7aac17 1271 Pfam PF13502 AsmA-like C-terminal region 1014 1256 2.7E-70 T 22-04-2016 IPR032712 AsmA-like, C-terminal LK04_RS01210 d0fe1e123e740aaccd90935d9a7aac17 1271 PANTHER PTHR38690 1 1269 0.0 T 22-04-2016 LK04_RS12840 b7b5f9fee01dc2d383cb51384db2096b 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.8E-23 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 LK04_RS12840 b7b5f9fee01dc2d383cb51384db2096b 81 PANTHER PTHR33359 1 81 3.4E-25 T 22-04-2016 LK04_RS12840 b7b5f9fee01dc2d383cb51384db2096b 81 PANTHER PTHR33359:SF1 1 81 3.4E-25 T 22-04-2016 LK04_RS12840 b7b5f9fee01dc2d383cb51384db2096b 81 Pfam PF02597 ThiS family 4 81 1.9E-20 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 LK04_RS12840 b7b5f9fee01dc2d383cb51384db2096b 81 Gene3D G3DSA:3.10.20.30 1 81 2.9E-24 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS12840 b7b5f9fee01dc2d383cb51384db2096b 81 SUPERFAMILY SSF54285 1 81 7.1E-22 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LK04_RS00330 c8fa19e2e9d56bb292f9e825f8d8ead6 145 Gene3D G3DSA:3.40.50.620 3 139 2.2E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS00330 c8fa19e2e9d56bb292f9e825f8d8ead6 145 Pfam PF00582 Universal stress protein family 3 138 7.7E-22 T 22-04-2016 IPR006016 UspA GO:0006950 LK04_RS00330 c8fa19e2e9d56bb292f9e825f8d8ead6 145 SUPERFAMILY SSF52402 3 139 5.11E-33 T 22-04-2016 LK04_RS00330 c8fa19e2e9d56bb292f9e825f8d8ead6 145 PIRSF PIRSF006276 1 141 5.0E-54 T 22-04-2016 IPR006015 Universal stress protein A LK04_RS14585 8b6432d7b6ceca09704d5bab51eeea7b 152 Pfam PF00156 Phosphoribosyl transferase domain 12 143 5.5E-17 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LK04_RS14585 8b6432d7b6ceca09704d5bab51eeea7b 152 SUPERFAMILY SSF53271 4 146 5.77E-31 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS14585 8b6432d7b6ceca09704d5bab51eeea7b 152 Gene3D G3DSA:3.40.50.2020 1 145 3.5E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LK04_RS14585 8b6432d7b6ceca09704d5bab51eeea7b 152 PANTHER PTHR39563 2 152 5.4E-110 T 22-04-2016 LK04_RS14585 8b6432d7b6ceca09704d5bab51eeea7b 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 39.943 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 LK04_RS08225 1b19d4ffccd855c08aa10408f554b6f8 195 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 20 1.5E-6 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 LK04_RS08225 1b19d4ffccd855c08aa10408f554b6f8 195 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 27 195 6.2E-62 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 LK04_RS08225 1b19d4ffccd855c08aa10408f554b6f8 195 Gene3D G3DSA:3.40.50.300 3 195 1.2E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08225 1b19d4ffccd855c08aa10408f554b6f8 195 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 195 9.6E-77 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 LK04_RS08225 1b19d4ffccd855c08aa10408f554b6f8 195 PIRSF PIRSF015617 1 195 6.9E-68 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 LK04_RS08225 1b19d4ffccd855c08aa10408f554b6f8 195 SUPERFAMILY SSF52540 6 195 6.54E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08225 1b19d4ffccd855c08aa10408f554b6f8 195 PANTHER PTHR30069 1 195 7.8E-66 T 22-04-2016 LK04_RS03220 2ff1edea7110d4f2aa1ee0dceed865e3 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LK04_RS03220 2ff1edea7110d4f2aa1ee0dceed865e3 156 SUPERFAMILY SSF54523 9 83 7.85E-14 T 22-04-2016 LK04_RS03220 2ff1edea7110d4f2aa1ee0dceed865e3 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 2.0E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LK04_RS03220 2ff1edea7110d4f2aa1ee0dceed865e3 156 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 28 2.2E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 SUPERFAMILY SSF55073 170 322 3.06E-36 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 SMART SM00267 152 324 2.8E-31 T 22-04-2016 IPR000160 GGDEF domain LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 Gene3D G3DSA:3.30.450.40 26 155 6.0E-14 T 22-04-2016 IPR029016 GAF domain-like LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 Pfam PF01590 GAF domain 28 159 1.4E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 PANTHER PTHR33121:SF12 10 160 1.8E-39 T 22-04-2016 LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 SUPERFAMILY SSF55781 28 159 9.16E-25 T 22-04-2016 IPR029016 GAF domain-like LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 322 2.4E-36 T 22-04-2016 IPR000160 GGDEF domain LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 165 321 1.5E-36 T 22-04-2016 IPR000160 GGDEF domain LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 SMART SM00065 26 169 9.3E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 Gene3D G3DSA:3.30.70.270 167 322 4.5E-40 T 22-04-2016 LK04_RS00380 2712340032e363244ade2f85c5e11d0c 324 PANTHER PTHR33121 10 160 1.8E-39 T 22-04-2016 LK04_RS17935 bcf30a21a23105fcdb27a355f1ab2a59 176 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 6.6E-30 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 LK04_RS17935 bcf30a21a23105fcdb27a355f1ab2a59 176 PANTHER PTHR33162:SF4 2 155 3.7E-55 T 22-04-2016 LK04_RS17935 bcf30a21a23105fcdb27a355f1ab2a59 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 5.9E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 LK04_RS17935 bcf30a21a23105fcdb27a355f1ab2a59 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 5.9E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 LK04_RS17935 bcf30a21a23105fcdb27a355f1ab2a59 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 5.9E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 LK04_RS17935 bcf30a21a23105fcdb27a355f1ab2a59 176 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 151 18.667 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 LK04_RS17935 bcf30a21a23105fcdb27a355f1ab2a59 176 PANTHER PTHR33162 2 155 3.7E-55 T 22-04-2016 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 Gene3D G3DSA:2.70.210.12 2 156 1.1E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 PIRSF PIRSF002401 1 377 8.4E-140 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.907 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 2.9E-146 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 Pfam PF01018 GTP1/OBG 3 157 1.1E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 SUPERFAMILY SSF82051 2 157 7.19E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 PANTHER PTHR11702:SF3 1 379 9.0E-200 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 Gene3D G3DSA:3.40.50.300 160 348 1.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16540 27453b11db6fcadffa61c23781076595 391 PANTHER PTHR11702 1 379 9.0E-200 T 22-04-2016 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 9.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 9.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 9.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 9.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 SUPERFAMILY SSF52540 152 332 3.96E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16540 27453b11db6fcadffa61c23781076595 391 Pfam PF01926 50S ribosome-binding GTPase 162 284 7.4E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LK04_RS16540 27453b11db6fcadffa61c23781076595 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 LK04_RS15595 672d80f1e9508b09af9c08c1af5fe2a6 317 Pfam PF02401 LytB protein 3 283 1.6E-90 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 LK04_RS15595 672d80f1e9508b09af9c08c1af5fe2a6 317 PANTHER PTHR30426 1 314 2.1E-155 T 22-04-2016 LK04_RS15595 672d80f1e9508b09af9c08c1af5fe2a6 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 36.603 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 LK04_RS15595 672d80f1e9508b09af9c08c1af5fe2a6 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 4.9E-98 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 LK04_RS18600 93acbb497efaaa125590bf7c1a616dc2 307 Pfam PF09084 NMT1/THI5 like 21 233 3.5E-12 T 22-04-2016 IPR015168 SsuA/THI5-like LK04_RS18600 93acbb497efaaa125590bf7c1a616dc2 307 Gene3D G3DSA:3.40.190.10 108 182 5.2E-5 T 22-04-2016 LK04_RS18600 93acbb497efaaa125590bf7c1a616dc2 307 SUPERFAMILY SSF53850 17 245 8.15E-14 T 22-04-2016 LK04_RS14025 9c0e27e5c412a1343525d66a1c8baddf 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.064 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 LK04_RS14025 9c0e27e5c412a1343525d66a1c8baddf 295 PANTHER PTHR11048:SF20 1 295 2.4E-154 T 22-04-2016 LK04_RS14025 9c0e27e5c412a1343525d66a1c8baddf 295 Pfam PF01040 UbiA prenyltransferase family 18 266 1.3E-57 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 LK04_RS14025 9c0e27e5c412a1343525d66a1c8baddf 295 PANTHER PTHR11048 1 295 2.4E-154 T 22-04-2016 LK04_RS14025 9c0e27e5c412a1343525d66a1c8baddf 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 2.3E-90 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 LK04_RS14025 9c0e27e5c412a1343525d66a1c8baddf 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site LK04_RS18510 c825371997c1e6536da7339f5fab15fb 275 Hamap MF_00187 Protein FdhD [fdhD]. 10 274 36.205 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 LK04_RS18510 c825371997c1e6536da7339f5fab15fb 275 Gene3D G3DSA:3.40.140.10 139 273 7.1E-47 T 22-04-2016 LK04_RS18510 c825371997c1e6536da7339f5fab15fb 275 PANTHER PTHR30592 5 274 5.9E-123 T 22-04-2016 LK04_RS18510 c825371997c1e6536da7339f5fab15fb 275 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 273 9.5E-90 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 LK04_RS18510 c825371997c1e6536da7339f5fab15fb 275 PANTHER PTHR30592:SF1 5 274 5.9E-123 T 22-04-2016 LK04_RS18510 c825371997c1e6536da7339f5fab15fb 275 PIRSF PIRSF015626 3 275 5.1E-79 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 LK04_RS18510 c825371997c1e6536da7339f5fab15fb 275 Gene3D G3DSA:3.10.20.10 40 125 1.9E-32 T 22-04-2016 LK04_RS18510 c825371997c1e6536da7339f5fab15fb 275 Pfam PF02634 FdhD/NarQ family 38 273 1.6E-69 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 LK04_RS18510 c825371997c1e6536da7339f5fab15fb 275 SUPERFAMILY SSF53927 23 273 3.01E-78 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LK04_RS06890 a784ee6f12cc182780ae440264f84de6 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS06890 a784ee6f12cc182780ae440264f84de6 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 195 4.3E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS06890 a784ee6f12cc182780ae440264f84de6 211 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 211 50.575 T 22-04-2016 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 LK04_RS06890 a784ee6f12cc182780ae440264f84de6 211 SUPERFAMILY SSF46894 132 190 5.44E-10 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LK04_RS06890 a784ee6f12cc182780ae440264f84de6 211 SMART SM00421 139 196 2.9E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS06890 a784ee6f12cc182780ae440264f84de6 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.6E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS06890 a784ee6f12cc182780ae440264f84de6 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.6E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS06890 a784ee6f12cc182780ae440264f84de6 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.6E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LK04_RS06890 a784ee6f12cc182780ae440264f84de6 211 Gene3D G3DSA:1.10.10.10 139 192 1.8E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS03975 cd1f994f4acdc378eb7cf89b4e41fdca 225 SMART SM00986 49 210 5.8E-40 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LK04_RS03975 cd1f994f4acdc378eb7cf89b4e41fdca 225 SMART SM00987 49 210 5.8E-40 T 22-04-2016 LK04_RS03975 cd1f994f4acdc378eb7cf89b4e41fdca 225 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 9.0E-27 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LK04_RS03975 cd1f994f4acdc378eb7cf89b4e41fdca 225 PANTHER PTHR11264:SF10 1 225 2.0E-163 T 22-04-2016 LK04_RS03975 cd1f994f4acdc378eb7cf89b4e41fdca 225 SUPERFAMILY SSF52141 6 220 9.59E-94 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LK04_RS03975 cd1f994f4acdc378eb7cf89b4e41fdca 225 Gene3D G3DSA:3.40.470.10 6 220 3.0E-99 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LK04_RS03975 cd1f994f4acdc378eb7cf89b4e41fdca 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 3.3E-86 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 LK04_RS03975 cd1f994f4acdc378eb7cf89b4e41fdca 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 39.897 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 LK04_RS03975 cd1f994f4acdc378eb7cf89b4e41fdca 225 PANTHER PTHR11264 1 225 2.0E-163 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 LK04_RS03975 cd1f994f4acdc378eb7cf89b4e41fdca 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 LK04_RS12910 fa6745ef7ad6bad6292ebc1e37b73183 272 PANTHER PTHR10000 1 272 3.6E-83 T 22-04-2016 LK04_RS12910 fa6745ef7ad6bad6292ebc1e37b73183 272 PANTHER PTHR10000:SF8 1 272 3.6E-83 T 22-04-2016 LK04_RS12910 fa6745ef7ad6bad6292ebc1e37b73183 272 SUPERFAMILY SSF56784 1 269 5.56E-66 T 22-04-2016 IPR023214 HAD-like domain LK04_RS12910 fa6745ef7ad6bad6292ebc1e37b73183 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 22-04-2016 LK04_RS12910 fa6745ef7ad6bad6292ebc1e37b73183 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 3.3E-64 T 22-04-2016 IPR023214 HAD-like domain LK04_RS12910 fa6745ef7ad6bad6292ebc1e37b73183 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 1.3E-24 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LK04_RS12910 fa6745ef7ad6bad6292ebc1e37b73183 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 2.2E-65 T 22-04-2016 IPR000150 Cof protein GO:0016787 LK04_RS12910 fa6745ef7ad6bad6292ebc1e37b73183 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 LK04_RS12910 fa6745ef7ad6bad6292ebc1e37b73183 272 Gene3D G3DSA:3.40.50.1000 176 269 6.1E-51 T 22-04-2016 IPR023214 HAD-like domain LK04_RS12910 fa6745ef7ad6bad6292ebc1e37b73183 272 Gene3D G3DSA:3.40.50.1000 1 73 6.1E-51 T 22-04-2016 IPR023214 HAD-like domain LK04_RS08945 bf3dd236a917da7e75f544562890ab22 516 SUPERFAMILY SSF53067 260 502 2.92E-41 T 22-04-2016 LK04_RS08945 bf3dd236a917da7e75f544562890ab22 516 PANTHER PTHR10196 5 516 1.1E-77 T 22-04-2016 LK04_RS08945 bf3dd236a917da7e75f544562890ab22 516 PIRSF PIRSF000538 4 513 1.4E-86 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS08945 bf3dd236a917da7e75f544562890ab22 516 Gene3D G3DSA:3.30.420.40 3 252 5.1E-48 T 22-04-2016 LK04_RS08945 bf3dd236a917da7e75f544562890ab22 516 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 251 2.1E-45 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LK04_RS08945 bf3dd236a917da7e75f544562890ab22 516 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 301 459 1.1E-24 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LK04_RS08945 bf3dd236a917da7e75f544562890ab22 516 Gene3D G3DSA:3.30.420.40 261 502 3.0E-32 T 22-04-2016 LK04_RS08945 bf3dd236a917da7e75f544562890ab22 516 PANTHER PTHR10196:SF67 5 516 1.1E-77 T 22-04-2016 LK04_RS08945 bf3dd236a917da7e75f544562890ab22 516 SUPERFAMILY SSF53067 6 254 1.82E-54 T 22-04-2016 LK04_RS09755 d2004ef7b09592a2b7cd2eb0084420da 1044 Pfam PF13550 Putative phage tail protein 332 492 3.0E-32 T 22-04-2016 IPR032876 Tip attachment protein J LK04_RS09755 d2004ef7b09592a2b7cd2eb0084420da 1044 Pfam PF09327 Domain of unknown function (DUF1983) 889 970 3.4E-18 T 22-04-2016 IPR015406 Domain of unknown function DUF1983 LK04_RS09755 d2004ef7b09592a2b7cd2eb0084420da 1044 PANTHER PTHR36251:SF2 1 985 2.5E-211 T 22-04-2016 LK04_RS09755 d2004ef7b09592a2b7cd2eb0084420da 1044 PANTHER PTHR36251 1 985 2.5E-211 T 22-04-2016 LK04_RS09755 d2004ef7b09592a2b7cd2eb0084420da 1044 SUPERFAMILY SSF49265 618 792 5.41E-5 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 LK04_RS13065 2415651f25c2a4402399b6e1d61f1154 379 PANTHER PTHR30365:SF6 1 379 1.9E-199 T 22-04-2016 LK04_RS13065 2415651f25c2a4402399b6e1d61f1154 379 PIRSF PIRSF000267 2 378 2.9E-131 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LK04_RS13065 2415651f25c2a4402399b6e1d61f1154 379 PANTHER PTHR30365 1 379 1.9E-199 T 22-04-2016 LK04_RS13065 2415651f25c2a4402399b6e1d61f1154 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.9E-198 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LK04_RS13065 2415651f25c2a4402399b6e1d61f1154 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 9.8E-111 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LK04_RS15305 1c70eb3b5b31e09e46b343071eca3508 317 Gene3D G3DSA:2.115.10.20 3 314 2.0E-90 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LK04_RS15305 1c70eb3b5b31e09e46b343071eca3508 317 PANTHER PTHR22925:SF12 1 309 1.5E-86 T 22-04-2016 LK04_RS15305 1c70eb3b5b31e09e46b343071eca3508 317 Pfam PF04616 Glycosyl hydrolases family 43 4 304 2.2E-65 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 LK04_RS15305 1c70eb3b5b31e09e46b343071eca3508 317 SUPERFAMILY SSF75005 4 311 1.99E-63 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LK04_RS15305 1c70eb3b5b31e09e46b343071eca3508 317 PANTHER PTHR22925 1 309 1.5E-86 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 LK04_RS15305 1c70eb3b5b31e09e46b343071eca3508 317 PIRSF PIRSF025414 1 317 1.4E-128 T 22-04-2016 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55|UniPathway: UPA00667 LK04_RS07705 888e90f83213f1aec7231410f3608563 552 Gene3D G3DSA:3.40.50.300 393 475 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07705 888e90f83213f1aec7231410f3608563 552 Gene3D G3DSA:3.40.50.300 51 254 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07705 888e90f83213f1aec7231410f3608563 552 Pfam PF00005 ABC transporter 52 162 1.3E-5 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS07705 888e90f83213f1aec7231410f3608563 552 SUPERFAMILY SSF52540 41 162 7.19E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07705 888e90f83213f1aec7231410f3608563 552 SUPERFAMILY SSF52540 373 482 7.19E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07705 888e90f83213f1aec7231410f3608563 552 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 302 464 2.8E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LK04_RS13435 306da7d35cac94240f4bc4c300120591 264 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site LK04_RS13435 306da7d35cac94240f4bc4c300120591 264 Gene3D G3DSA:3.60.110.10 1 256 1.9E-64 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS13435 306da7d35cac94240f4bc4c300120591 264 SUPERFAMILY SSF56317 1 254 8.63E-64 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS13435 306da7d35cac94240f4bc4c300120591 264 Pfam PF00795 Carbon-nitrogen hydrolase 3 243 7.1E-35 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS13435 306da7d35cac94240f4bc4c300120591 264 PANTHER PTHR23088:SF27 1 256 7.8E-78 T 22-04-2016 LK04_RS13435 306da7d35cac94240f4bc4c300120591 264 PANTHER PTHR23088 1 256 7.8E-78 T 22-04-2016 LK04_RS13480 a6797b3ab58e9a694f297e56672c657e 438 PIRSF PIRSF002746 1 438 4.0E-157 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS13480 a6797b3ab58e9a694f297e56672c657e 438 PANTHER PTHR30354:SF4 1 438 0.0 T 22-04-2016 LK04_RS13480 a6797b3ab58e9a694f297e56672c657e 438 PANTHER PTHR30354 1 438 0.0 T 22-04-2016 LK04_RS13480 a6797b3ab58e9a694f297e56672c657e 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 3.7E-194 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS13480 a6797b3ab58e9a694f297e56672c657e 438 Pfam PF02447 GntP family permease 1 435 3.5E-180 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LK04_RS19830 01d9d4c7894047c5873231e69712cbb5 207 PANTHER PTHR11260 2 198 7.3E-63 T 22-04-2016 LK04_RS19830 01d9d4c7894047c5873231e69712cbb5 207 Gene3D G3DSA:1.20.1050.10 88 200 9.2E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS19830 01d9d4c7894047c5873231e69712cbb5 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 77 7.5E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LK04_RS19830 01d9d4c7894047c5873231e69712cbb5 207 SUPERFAMILY SSF47616 79 201 1.95E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LK04_RS19830 01d9d4c7894047c5873231e69712cbb5 207 SUPERFAMILY SSF52833 1 85 3.63E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS19830 01d9d4c7894047c5873231e69712cbb5 207 Gene3D G3DSA:3.40.30.10 7 87 3.5E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS19830 01d9d4c7894047c5873231e69712cbb5 207 PANTHER PTHR11260:SF253 2 198 7.3E-63 T 22-04-2016 LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 Pfam PF13458 Periplasmic binding protein 27 354 4.5E-62 T 22-04-2016 IPR028081 Leucine-binding protein domain LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 9.5E-54 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 9.5E-54 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 9.5E-54 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 9.5E-54 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 9.5E-54 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 9.5E-54 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 PANTHER PTHR30483 5 365 6.3E-217 T 22-04-2016 LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 SUPERFAMILY SSF53822 25 371 1.55E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 Gene3D G3DSA:3.40.50.2300 26 225 3.0E-64 T 22-04-2016 LK04_RS17490 9b2b412347e7546755aba64c8529c3bc 375 PANTHER PTHR30483:SF16 5 365 6.3E-217 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS17380 3cbbd63dfe33f092ac9bcb310ef14562 269 Gene3D G3DSA:3.40.720.10 2 228 2.3E-33 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LK04_RS17380 3cbbd63dfe33f092ac9bcb310ef14562 269 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 3 208 8.1E-11 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 LK04_RS17380 3cbbd63dfe33f092ac9bcb310ef14562 269 SUPERFAMILY SSF53649 2 253 1.8E-44 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LK04_RS01230 01d24c2b38170d22d0bb811200cd71ee 309 Pfam PF13533 Biotin-lipoyl like 47 94 2.8E-16 T 22-04-2016 LK04_RS01230 01d24c2b38170d22d0bb811200cd71ee 309 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 309 54.555 T 22-04-2016 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA LK04_RS01230 01d24c2b38170d22d0bb811200cd71ee 309 SUPERFAMILY SSF111369 46 241 7.32E-22 T 22-04-2016 LK04_RS01230 01d24c2b38170d22d0bb811200cd71ee 309 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 242 1.1E-30 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS01230 01d24c2b38170d22d0bb811200cd71ee 309 Gene3D G3DSA:2.40.50.100 47 80 4.9E-16 T 22-04-2016 LK04_RS01230 01d24c2b38170d22d0bb811200cd71ee 309 Gene3D G3DSA:2.40.50.100 154 188 4.9E-16 T 22-04-2016 LK04_RS01230 01d24c2b38170d22d0bb811200cd71ee 309 Pfam PF13437 HlyD family secretion protein 156 239 3.5E-8 T 22-04-2016 LK04_RS01230 01d24c2b38170d22d0bb811200cd71ee 309 PANTHER PTHR30367:SF3 4 307 1.1E-171 T 22-04-2016 LK04_RS01230 01d24c2b38170d22d0bb811200cd71ee 309 PANTHER PTHR30367 4 307 1.1E-171 T 22-04-2016 LK04_RS05390 da5921a292eb7b14859bd149456d67c9 189 PANTHER PTHR30108 2 188 4.8E-116 T 22-04-2016 LK04_RS05390 da5921a292eb7b14859bd149456d67c9 189 Gene3D G3DSA:3.40.50.1950 2 188 5.7E-75 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LK04_RS05390 da5921a292eb7b14859bd149456d67c9 189 PANTHER PTHR30108:SF10 2 188 4.8E-116 T 22-04-2016 LK04_RS05390 da5921a292eb7b14859bd149456d67c9 189 Pfam PF02441 Flavoprotein 2 127 3.9E-24 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LK04_RS05390 da5921a292eb7b14859bd149456d67c9 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.615 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 LK04_RS05390 da5921a292eb7b14859bd149456d67c9 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 8.8E-70 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 LK04_RS05390 da5921a292eb7b14859bd149456d67c9 189 SUPERFAMILY SSF52507 2 179 3.4E-58 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LK04_RS16905 2c554dc8f43c8fd7eb356e14483f1a0e 483 PANTHER PTHR32089 216 483 6.6E-65 T 22-04-2016 LK04_RS16905 2c554dc8f43c8fd7eb356e14483f1a0e 483 SMART SM00283 234 481 3.0E-58 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS16905 2c554dc8f43c8fd7eb356e14483f1a0e 483 SUPERFAMILY SSF58104 214 482 5.23E-55 T 22-04-2016 LK04_RS16905 2c554dc8f43c8fd7eb356e14483f1a0e 483 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 286 480 1.8E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS16905 2c554dc8f43c8fd7eb356e14483f1a0e 483 Gene3D G3DSA:1.10.287.950 251 452 1.3E-48 T 22-04-2016 LK04_RS10640 d8e2405f5c5b4f116dc050c0e125adcc 129 Gene3D G3DSA:3.40.50.2300 4 125 4.2E-39 T 22-04-2016 LK04_RS10640 d8e2405f5c5b4f116dc050c0e125adcc 129 PANTHER PTHR26402 6 126 2.8E-41 T 22-04-2016 LK04_RS10640 d8e2405f5c5b4f116dc050c0e125adcc 129 SMART SM00448 6 120 2.0E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS10640 d8e2405f5c5b4f116dc050c0e125adcc 129 SUPERFAMILY SSF52172 4 125 2.56E-36 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS10640 d8e2405f5c5b4f116dc050c0e125adcc 129 Pfam PF00072 Response regulator receiver domain 9 120 7.4E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS15140 b9730a48c2dcd5c58d2b0330f75bf6d2 256 PANTHER PTHR30413 3 255 6.9E-164 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS15140 b9730a48c2dcd5c58d2b0330f75bf6d2 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 7.9E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS15140 b9730a48c2dcd5c58d2b0330f75bf6d2 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 7.9E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS15140 b9730a48c2dcd5c58d2b0330f75bf6d2 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 7.9E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS15140 b9730a48c2dcd5c58d2b0330f75bf6d2 256 Pfam PF01061 ABC-2 type transporter 9 218 2.7E-39 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 LK04_RS15140 b9730a48c2dcd5c58d2b0330f75bf6d2 256 PIRSF PIRSF006648 11 253 1.2E-23 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS15140 b9730a48c2dcd5c58d2b0330f75bf6d2 256 PANTHER PTHR30413:SF2 3 255 6.9E-164 T 22-04-2016 LK04_RS00370 17b8451db6f3132d6fda62b852885248 163 SUPERFAMILY SSF46689 63 112 3.72E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00370 17b8451db6f3132d6fda62b852885248 163 SMART SM00342 25 108 2.4E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS00370 17b8451db6f3132d6fda62b852885248 163 Gene3D G3DSA:1.10.10.60 68 112 1.4E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00370 17b8451db6f3132d6fda62b852885248 163 PANTHER PTHR11019:SF84 10 116 1.1E-30 T 22-04-2016 LK04_RS00370 17b8451db6f3132d6fda62b852885248 163 SUPERFAMILY SSF46689 10 59 5.38E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00370 17b8451db6f3132d6fda62b852885248 163 Pfam PF12833 Helix-turn-helix domain 32 110 3.5E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS00370 17b8451db6f3132d6fda62b852885248 163 Gene3D G3DSA:1.10.10.60 7 61 9.0E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00370 17b8451db6f3132d6fda62b852885248 163 PANTHER PTHR11019 10 116 1.1E-30 T 22-04-2016 LK04_RS14655 498d016a72f9709fc6461b8b8e3d533a 204 SMART SM01007 8 196 7.5E-52 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS14655 498d016a72f9709fc6461b8b8e3d533a 204 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 118.572 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 LK04_RS14655 498d016a72f9709fc6461b8b8e3d533a 204 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 10 199 1.3E-67 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 LK04_RS14655 498d016a72f9709fc6461b8b8e3d533a 204 SUPERFAMILY SSF53639 6 200 4.32E-45 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS14655 498d016a72f9709fc6461b8b8e3d533a 204 Gene3D G3DSA:3.40.225.10 7 201 2.7E-47 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS14655 498d016a72f9709fc6461b8b8e3d533a 204 PANTHER PTHR10640 21 196 2.0E-41 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 LK04_RS14655 498d016a72f9709fc6461b8b8e3d533a 204 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 195 3.9E-42 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 SUPERFAMILY SSF46785 1 81 2.83E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 Gene3D G3DSA:3.40.190.10 90 186 1.1E-9 T 22-04-2016 LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 Gene3D G3DSA:3.40.190.10 187 263 3.7E-5 T 22-04-2016 LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 Pfam PF03466 LysR substrate binding domain 89 264 1.6E-16 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 SUPERFAMILY SSF53850 90 276 1.45E-17 T 22-04-2016 LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 PANTHER PTHR30346 1 246 1.4E-46 T 22-04-2016 LK04_RS02600 c091d3e517b99526722c8c09a6032ce0 292 Gene3D G3DSA:1.10.10.10 1 82 4.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 7.9E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 7.9E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 7.9E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 7.9E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 9.8E-27 T 22-04-2016 IPR023214 HAD-like domain LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 Gene3D G3DSA:1.10.150.240 19 57 6.5E-4 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 Gene3D G3DSA:3.40.50.1000 62 210 6.5E-46 T 22-04-2016 IPR023214 HAD-like domain LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 PANTHER PTHR18901 1 205 1.4E-105 T 22-04-2016 LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 181 8.7E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 PANTHER PTHR18901:SF20 1 205 1.4E-105 T 22-04-2016 LK04_RS05470 8e066febdd12f022f9ed845931b229e2 219 SUPERFAMILY SSF56784 2 203 1.6E-43 T 22-04-2016 IPR023214 HAD-like domain LK04_RS13200 9f7b5d0b493a8641c757b4648a6ed277 91 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 89 5.6E-7 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 LK04_RS15050 27baaf68949e391e9c45194478229cd2 115 SUPERFAMILY SSF89360 9 104 7.46E-31 T 22-04-2016 IPR000361 FeS cluster biogenesis LK04_RS15050 27baaf68949e391e9c45194478229cd2 115 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 114 4.5E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 LK04_RS15050 27baaf68949e391e9c45194478229cd2 115 PANTHER PTHR10072 10 115 9.2E-49 T 22-04-2016 LK04_RS15050 27baaf68949e391e9c45194478229cd2 115 Pfam PF01521 Iron-sulphur cluster biosynthesis 10 110 1.3E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis LK04_RS15050 27baaf68949e391e9c45194478229cd2 115 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 96 113 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site LK04_RS15050 27baaf68949e391e9c45194478229cd2 115 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 115 36.842 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 LK04_RS15050 27baaf68949e391e9c45194478229cd2 115 Gene3D G3DSA:2.60.300.12 10 104 6.5E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis LK04_RS17345 6a4f0a928618b29d497a3a964fbb01f0 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 LK04_RS17345 6a4f0a928618b29d497a3a964fbb01f0 122 Gene3D G3DSA:1.10.3830.10 4 121 3.2E-46 T 22-04-2016 LK04_RS17345 6a4f0a928618b29d497a3a964fbb01f0 122 PANTHER PTHR34299:SF1 1 121 1.2E-40 T 22-04-2016 LK04_RS17345 6a4f0a928618b29d497a3a964fbb01f0 122 PANTHER PTHR34299 1 121 1.2E-40 T 22-04-2016 LK04_RS17345 6a4f0a928618b29d497a3a964fbb01f0 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 116 2.0E-36 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 LK04_RS08850 3ac9c89065b33068f2be525de973ae78 374 Gene3D G3DSA:3.40.710.10 26 372 1.9E-82 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS08850 3ac9c89065b33068f2be525de973ae78 374 SUPERFAMILY SSF56601 23 372 8.21E-93 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS08850 3ac9c89065b33068f2be525de973ae78 374 PANTHER PTHR22935 26 374 2.6E-58 T 22-04-2016 LK04_RS08850 3ac9c89065b33068f2be525de973ae78 374 Pfam PF00144 Beta-lactamase 26 370 2.5E-75 T 22-04-2016 IPR001466 Beta-lactamase-related LK04_RS08850 3ac9c89065b33068f2be525de973ae78 374 ProSitePatterns PS00336 Beta-lactamase class-C active site. 73 80 - T 22-04-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 LK04_RS08850 3ac9c89065b33068f2be525de973ae78 374 PANTHER PTHR22935:SF64 26 374 2.6E-58 T 22-04-2016 LK04_RS12850 1871444972020c631fa4e1f9b0f5b6bc 171 SUPERFAMILY SSF53218 8 168 2.75E-45 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS12850 1871444972020c631fa4e1f9b0f5b6bc 171 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 11 152 2.2E-36 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS12850 1871444972020c631fa4e1f9b0f5b6bc 171 PANTHER PTHR10192:SF18 5 170 6.7E-87 T 22-04-2016 LK04_RS12850 1871444972020c631fa4e1f9b0f5b6bc 171 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 2.1E-79 T 22-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 LK04_RS12850 1871444972020c631fa4e1f9b0f5b6bc 171 PIRSF PIRSF006443 2 166 1.7E-62 T 22-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 LK04_RS12850 1871444972020c631fa4e1f9b0f5b6bc 171 SMART SM00852 14 158 6.2E-27 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS12850 1871444972020c631fa4e1f9b0f5b6bc 171 PANTHER PTHR10192 5 170 6.7E-87 T 22-04-2016 LK04_RS12850 1871444972020c631fa4e1f9b0f5b6bc 171 Pfam PF00994 Probable molybdopterin binding domain 14 156 9.6E-32 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS12850 1871444972020c631fa4e1f9b0f5b6bc 171 Gene3D G3DSA:3.40.980.10 10 169 4.8E-50 T 22-04-2016 IPR001453 MoaB/Mog domain LK04_RS08455 62e7631d4fe21b110313c5e99f903d84 311 PIRSF PIRSF004976 2 271 6.3E-76 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 LK04_RS08455 62e7631d4fe21b110313c5e99f903d84 311 Gene3D G3DSA:3.40.50.620 23 206 1.7E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS08455 62e7631d4fe21b110313c5e99f903d84 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.971 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 LK04_RS08455 62e7631d4fe21b110313c5e99f903d84 311 PANTHER PTHR11807 1 269 2.6E-122 T 22-04-2016 LK04_RS08455 62e7631d4fe21b110313c5e99f903d84 311 Pfam PF01171 PP-loop family 42 204 5.2E-13 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LK04_RS08455 62e7631d4fe21b110313c5e99f903d84 311 SUPERFAMILY SSF52402 17 235 1.58E-54 T 22-04-2016 LK04_RS08455 62e7631d4fe21b110313c5e99f903d84 311 PANTHER PTHR11807:SF16 1 269 2.6E-122 T 22-04-2016 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 PANTHER PTHR19139 11 281 9.4E-94 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 252 9.6E-70 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 Gene3D G3DSA:1.20.1080.10 5 258 1.2E-85 T 22-04-2016 IPR023271 Aquaporin-like LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 PRINTS PR00783 Major intrinsic protein family signature 235 255 8.2E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 PRINTS PR00783 Major intrinsic protein family signature 185 207 8.2E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 PRINTS PR00783 Major intrinsic protein family signature 152 170 8.2E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 PRINTS PR00783 Major intrinsic protein family signature 86 105 8.2E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 PRINTS PR00783 Major intrinsic protein family signature 49 73 8.2E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 PRINTS PR00783 Major intrinsic protein family signature 10 29 8.2E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 SUPERFAMILY SSF81338 10 258 7.19E-78 T 22-04-2016 IPR023271 Aquaporin-like LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 ProSitePatterns PS00221 MIP family signature. 67 75 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 Pfam PF00230 Major intrinsic protein 5 252 4.1E-69 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LK04_RS19585 d2131b03bf50da661e6b29a0dc763643 282 PANTHER PTHR19139:SF100 11 281 9.4E-94 T 22-04-2016 LK04_RS15225 53cc3729c5bb192a5497273a2ab0f8cf 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 118 6.0E-48 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 LK04_RS15225 53cc3729c5bb192a5497273a2ab0f8cf 120 PIRSF PIRSF006287 1 120 2.0E-46 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 LK04_RS15225 53cc3729c5bb192a5497273a2ab0f8cf 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 28.349 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 LK04_RS15225 53cc3729c5bb192a5497273a2ab0f8cf 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 3.7E-42 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 LK04_RS07655 b07a6eb1238b685259a31e7097a80361 576 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 139 149 3.6E-30 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 LK04_RS07655 b07a6eb1238b685259a31e7097a80361 576 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 203 214 3.6E-30 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 LK04_RS07655 b07a6eb1238b685259a31e7097a80361 576 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 188 201 3.6E-30 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 LK04_RS07655 b07a6eb1238b685259a31e7097a80361 576 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 170 183 3.6E-30 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 LK04_RS07655 b07a6eb1238b685259a31e7097a80361 576 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 120 138 3.6E-30 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 LK04_RS07655 b07a6eb1238b685259a31e7097a80361 576 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 265 271 3.6E-30 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 LK04_RS07655 b07a6eb1238b685259a31e7097a80361 576 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 45 58 3.6E-30 T 22-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 LK04_RS07655 b07a6eb1238b685259a31e7097a80361 576 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 50 259 6.8E-26 T 22-04-2016 IPR000477 Reverse transcriptase domain LK04_RS07655 b07a6eb1238b685259a31e7097a80361 576 SUPERFAMILY SSF56672 102 255 7.0E-8 T 22-04-2016 LK04_RS06615 373c100b512927573a44c4da72687d34 682 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 4 182 2.0E-46 T 22-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal LK04_RS06615 373c100b512927573a44c4da72687d34 682 Pfam PF01968 Hydantoinase/oxoprolinase 203 489 2.5E-82 T 22-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 LK04_RS06615 373c100b512927573a44c4da72687d34 682 SUPERFAMILY SSF53067 3 79 3.86E-7 T 22-04-2016 LK04_RS06615 373c100b512927573a44c4da72687d34 682 SUPERFAMILY SSF53067 265 310 3.86E-7 T 22-04-2016 LK04_RS06615 373c100b512927573a44c4da72687d34 682 PANTHER PTHR11365 1 677 8.7E-156 T 22-04-2016 LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 PANTHER PTHR30173 1 186 8.5E-54 T 22-04-2016 LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 Pfam PF08281 Sigma-70, region 4 130 180 1.3E-18 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 SUPERFAMILY SSF88946 2 104 5.97E-30 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 Gene3D G3DSA:1.10.1740.10 2 109 5.5E-36 T 22-04-2016 LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 Gene3D G3DSA:1.10.10.10 122 187 1.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 4.1E-99 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 PANTHER PTHR30173:SF1 1 186 8.5E-54 T 22-04-2016 LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 SUPERFAMILY SSF88659 122 183 2.43E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 183 9.2E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS04000 ed9f8e166efe8f9142bf01ba18d55eaa 192 Pfam PF04542 Sigma-70 region 2 25 91 6.3E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LK04_RS07885 6dac2e77292f3bc11a7e7374a8d49a07 270 PANTHER PTHR13696 1 258 7.1E-95 T 22-04-2016 LK04_RS07885 6dac2e77292f3bc11a7e7374a8d49a07 270 Gene3D G3DSA:3.40.50.300 1 248 3.5E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07885 6dac2e77292f3bc11a7e7374a8d49a07 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.1E-110 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 LK04_RS07885 6dac2e77292f3bc11a7e7374a8d49a07 270 PANTHER PTHR13696:SF1 1 258 7.1E-95 T 22-04-2016 LK04_RS07885 6dac2e77292f3bc11a7e7374a8d49a07 270 SUPERFAMILY SSF52540 1 268 2.01E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07885 6dac2e77292f3bc11a7e7374a8d49a07 270 PIRSF PIRSF003092 1 270 6.9E-100 T 22-04-2016 IPR025501 ATP binding protein MinD LK04_RS07885 6dac2e77292f3bc11a7e7374a8d49a07 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 7.5E-29 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LK04_RS10870 ba56c7b2126318d38abe9f5f32d13cf0 55 PANTHER PTHR36569:SF4 1 53 1.6E-25 T 22-04-2016 LK04_RS10870 ba56c7b2126318d38abe9f5f32d13cf0 55 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 5.8E-8 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat LK04_RS10870 ba56c7b2126318d38abe9f5f32d13cf0 55 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 51 3.0E-7 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat LK04_RS10870 ba56c7b2126318d38abe9f5f32d13cf0 55 PANTHER PTHR36569 1 53 1.6E-25 T 22-04-2016 LK04_RS07800 823cbd43ffcfdc64e577ee056057625b 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 2.9E-58 T 22-04-2016 IPR009328 Protein of unknown function DUF986 LK04_RS07800 823cbd43ffcfdc64e577ee056057625b 152 PIRSF PIRSF020687 1 152 6.0E-55 T 22-04-2016 IPR009328 Protein of unknown function DUF986 LK04_RS07800 823cbd43ffcfdc64e577ee056057625b 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 26 148 7.0E-36 T 22-04-2016 IPR009328 Protein of unknown function DUF986 LK04_RS07800 823cbd43ffcfdc64e577ee056057625b 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 26.499 T 22-04-2016 IPR009328 Protein of unknown function DUF986 LK04_RS11005 56d162846ebba1876553999c7ae7b9b9 495 PIRSF PIRSF000538 3 494 2.8E-121 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LK04_RS11005 56d162846ebba1876553999c7ae7b9b9 495 Gene3D G3DSA:3.30.420.40 260 491 3.4E-62 T 22-04-2016 LK04_RS11005 56d162846ebba1876553999c7ae7b9b9 495 PANTHER PTHR10196:SF9 1 489 9.8E-154 T 22-04-2016 LK04_RS11005 56d162846ebba1876553999c7ae7b9b9 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 445 2.7E-40 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LK04_RS11005 56d162846ebba1876553999c7ae7b9b9 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 250 1.5E-60 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LK04_RS11005 56d162846ebba1876553999c7ae7b9b9 495 PANTHER PTHR10196 1 489 9.8E-154 T 22-04-2016 LK04_RS11005 56d162846ebba1876553999c7ae7b9b9 495 SUPERFAMILY SSF53067 5 253 1.99E-71 T 22-04-2016 LK04_RS11005 56d162846ebba1876553999c7ae7b9b9 495 SUPERFAMILY SSF53067 258 487 1.53E-51 T 22-04-2016 LK04_RS11005 56d162846ebba1876553999c7ae7b9b9 495 Gene3D G3DSA:3.30.420.40 2 250 8.5E-77 T 22-04-2016 LK04_RS04860 3230b6fb458554cd37e21c98eb92bc65 405 PANTHER PTHR11360 8 395 1.6E-88 T 22-04-2016 LK04_RS04860 3230b6fb458554cd37e21c98eb92bc65 405 Pfam PF07690 Major Facilitator Superfamily 31 233 1.3E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS04860 3230b6fb458554cd37e21c98eb92bc65 405 PANTHER PTHR11360:SF3 8 395 1.6E-88 T 22-04-2016 LK04_RS04860 3230b6fb458554cd37e21c98eb92bc65 405 Gene3D G3DSA:1.20.1250.20 18 195 1.8E-17 T 22-04-2016 LK04_RS04860 3230b6fb458554cd37e21c98eb92bc65 405 TIGRFAM TIGR00890 2A0111: oxalate/formate antiporter family transporter 13 386 4.3E-114 T 22-04-2016 IPR004741 Oxalate/formate antiporter family transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS04860 3230b6fb458554cd37e21c98eb92bc65 405 SUPERFAMILY SSF103473 11 395 3.27E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS04860 3230b6fb458554cd37e21c98eb92bc65 405 Gene3D G3DSA:1.20.1250.20 217 396 4.3E-16 T 22-04-2016 LK04_RS04045 13be118650f5a2cab35425f5a7a2a6f6 243 SUPERFAMILY SSF63892 4 242 7.45E-102 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 LK04_RS04045 13be118650f5a2cab35425f5a7a2a6f6 243 PANTHER PTHR30456 2 243 1.5E-146 T 22-04-2016 LK04_RS04045 13be118650f5a2cab35425f5a7a2a6f6 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 7.9E-106 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 LK04_RS04045 13be118650f5a2cab35425f5a7a2a6f6 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.378 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 LK04_RS04045 13be118650f5a2cab35425f5a7a2a6f6 243 PANTHER PTHR30456:SF0 2 243 1.5E-146 T 22-04-2016 LK04_RS04045 13be118650f5a2cab35425f5a7a2a6f6 243 Gene3D G3DSA:3.20.20.70 3 242 8.7E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS04045 13be118650f5a2cab35425f5a7a2a6f6 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.8E-105 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 LK04_RS15645 7994b0e880556ea73e750be4e4046535 433 Pfam PF07690 Major Facilitator Superfamily 53 383 4.8E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS15645 7994b0e880556ea73e750be4e4046535 433 PANTHER PTHR23508 7 425 2.2E-244 T 22-04-2016 LK04_RS15645 7994b0e880556ea73e750be4e4046535 433 SUPERFAMILY SSF103473 5 421 1.83E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS15645 7994b0e880556ea73e750be4e4046535 433 PANTHER PTHR23508:SF5 7 425 2.2E-244 T 22-04-2016 LK04_RS15645 7994b0e880556ea73e750be4e4046535 433 Gene3D G3DSA:1.20.1250.20 241 425 1.7E-15 T 22-04-2016 LK04_RS15645 7994b0e880556ea73e750be4e4046535 433 Gene3D G3DSA:1.20.1250.20 19 223 3.2E-23 T 22-04-2016 LK04_RS10410 4d9c4bb87dddb9ae07728bfd38c7d5cd 479 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 449 6.0E-155 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 LK04_RS10410 4d9c4bb87dddb9ae07728bfd38c7d5cd 479 PANTHER PTHR32057 1 479 1.3E-194 T 22-04-2016 LK04_RS10410 4d9c4bb87dddb9ae07728bfd38c7d5cd 479 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 466 42.899 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 LK04_RS11825 c5bc20dce98dc44a2fb8b2426b7465aa 140 Gene3D G3DSA:3.40.50.720 2 135 8.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS11825 c5bc20dce98dc44a2fb8b2426b7465aa 140 SUPERFAMILY SSF51735 2 134 6.13E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS11825 c5bc20dce98dc44a2fb8b2426b7465aa 140 PANTHER PTHR33303 1 138 8.5E-53 T 22-04-2016 LK04_RS11825 c5bc20dce98dc44a2fb8b2426b7465aa 140 SMART SM00881 9 104 4.5E-23 T 22-04-2016 IPR003781 CoA-binding GO:0048037 LK04_RS11825 c5bc20dce98dc44a2fb8b2426b7465aa 140 Pfam PF13380 CoA binding domain 14 130 7.6E-37 T 22-04-2016 IPR003781 CoA-binding GO:0048037 LK04_RS07640 94c9e90ffa91ca5aae28b56ca80989fd 282 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 7 282 4.9E-111 T 22-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 LK04_RS17325 7ed018c0c7069a4e48428612f22950d2 173 PANTHER PTHR33202 7 171 7.3E-79 T 22-04-2016 LK04_RS17325 7ed018c0c7069a4e48428612f22950d2 173 SUPERFAMILY SSF46785 12 145 3.38E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17325 7ed018c0c7069a4e48428612f22950d2 173 Gene3D G3DSA:1.10.10.10 12 84 7.0E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS17325 7ed018c0c7069a4e48428612f22950d2 173 Pfam PF01475 Ferric uptake regulator family 20 138 4.2E-14 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 LK04_RS17325 7ed018c0c7069a4e48428612f22950d2 173 PANTHER PTHR33202:SF6 7 171 7.3E-79 T 22-04-2016 LK04_RS15930 49a9267ee8b61f25cb4fd0162dfde005 254 PANTHER PTHR30363:SF8 2 254 8.2E-123 T 22-04-2016 LK04_RS15930 49a9267ee8b61f25cb4fd0162dfde005 254 Gene3D G3DSA:3.40.50.1360 77 217 7.0E-8 T 22-04-2016 LK04_RS15930 49a9267ee8b61f25cb4fd0162dfde005 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 56 1.4E-11 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS15930 49a9267ee8b61f25cb4fd0162dfde005 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LK04_RS15930 49a9267ee8b61f25cb4fd0162dfde005 254 Gene3D G3DSA:1.10.10.10 3 61 4.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS15930 49a9267ee8b61f25cb4fd0162dfde005 254 Pfam PF00455 DeoR C terminal sensor domain 76 234 1.2E-42 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain LK04_RS15930 49a9267ee8b61f25cb4fd0162dfde005 254 SMART SM01134 74 235 6.6E-55 T 22-04-2016 LK04_RS15930 49a9267ee8b61f25cb4fd0162dfde005 254 SMART SM00420 8 57 4.5E-9 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS15930 49a9267ee8b61f25cb4fd0162dfde005 254 PANTHER PTHR30363 2 254 8.2E-123 T 22-04-2016 LK04_RS15930 49a9267ee8b61f25cb4fd0162dfde005 254 SUPERFAMILY SSF100950 75 236 6.38E-25 T 22-04-2016 LK04_RS18640 f1934ae7e6c7e24e35a2846a5d6dc3e4 330 PANTHER PTHR30036 1 330 8.0E-167 T 22-04-2016 LK04_RS18640 f1934ae7e6c7e24e35a2846a5d6dc3e4 330 Pfam PF13407 Periplasmic binding protein domain 38 284 2.5E-62 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS18640 f1934ae7e6c7e24e35a2846a5d6dc3e4 330 SUPERFAMILY SSF53822 24 317 6.16E-73 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS18640 f1934ae7e6c7e24e35a2846a5d6dc3e4 330 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 8.9E-163 T 22-04-2016 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 LK04_RS18640 f1934ae7e6c7e24e35a2846a5d6dc3e4 330 PANTHER PTHR30036:SF1 1 330 8.0E-167 T 22-04-2016 LK04_RS18640 f1934ae7e6c7e24e35a2846a5d6dc3e4 330 Gene3D G3DSA:3.40.50.2300 25 142 3.4E-35 T 22-04-2016 LK04_RS18640 f1934ae7e6c7e24e35a2846a5d6dc3e4 330 Gene3D G3DSA:3.40.50.2300 143 316 1.0E-47 T 22-04-2016 LK04_RS19345 7c0e2d1b4999766852e61772fa4ae582 147 Pfam PF12098 Protein of unknown function (DUF3574) 46 147 2.1E-37 T 22-04-2016 IPR021957 Protein of unknown function DUF3574 LK04_RS05490 3e7e1c54af341bbe4ae5f072ac978693 147 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 4.9E-31 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 LK04_RS05490 3e7e1c54af341bbe4ae5f072ac978693 147 PANTHER PTHR11058:SF5 1 127 1.5E-68 T 22-04-2016 LK04_RS05490 3e7e1c54af341bbe4ae5f072ac978693 147 PANTHER PTHR11058 1 127 1.5E-68 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 LK04_RS05490 3e7e1c54af341bbe4ae5f072ac978693 147 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.74 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 LK04_RS03545 b2f9472e170a256e84e906aaacf585a6 360 Gene3D G3DSA:1.10.530.10 243 354 9.2E-58 T 22-04-2016 LK04_RS03545 b2f9472e170a256e84e906aaacf585a6 360 Gene3D G3DSA:1.10.530.10 109 162 9.2E-58 T 22-04-2016 LK04_RS03545 b2f9472e170a256e84e906aaacf585a6 360 SUPERFAMILY SSF53955 45 352 4.78E-95 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS03545 b2f9472e170a256e84e906aaacf585a6 360 PANTHER PTHR30163:SF0 1 359 1.0E-195 T 22-04-2016 LK04_RS03545 b2f9472e170a256e84e906aaacf585a6 360 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 60 351 2.8E-120 T 22-04-2016 IPR011757 Lytic transglycosylase MltB LK04_RS03545 b2f9472e170a256e84e906aaacf585a6 360 PANTHER PTHR30163 1 359 1.0E-195 T 22-04-2016 IPR011757 Lytic transglycosylase MltB LK04_RS03545 b2f9472e170a256e84e906aaacf585a6 360 Pfam PF13406 Transglycosylase SLT domain 56 348 3.2E-91 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 LK04_RS05240 591bda531db5ebde7b653c94108c3527 298 Gene3D G3DSA:3.40.190.10 177 259 7.7E-5 T 22-04-2016 LK04_RS05240 591bda531db5ebde7b653c94108c3527 298 Gene3D G3DSA:3.40.190.10 97 176 2.9E-21 T 22-04-2016 LK04_RS05240 591bda531db5ebde7b653c94108c3527 298 Gene3D G3DSA:1.10.10.10 4 85 3.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05240 591bda531db5ebde7b653c94108c3527 298 PANTHER PTHR30537:SF5 1 292 6.5E-103 T 22-04-2016 LK04_RS05240 591bda531db5ebde7b653c94108c3527 298 SUPERFAMILY SSF46785 4 84 2.32E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS05240 591bda531db5ebde7b653c94108c3527 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.0E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05240 591bda531db5ebde7b653c94108c3527 298 SUPERFAMILY SSF53850 90 293 4.81E-44 T 22-04-2016 LK04_RS05240 591bda531db5ebde7b653c94108c3527 298 Pfam PF03466 LysR substrate binding domain 89 292 3.4E-44 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS05240 591bda531db5ebde7b653c94108c3527 298 PANTHER PTHR30537 1 292 6.5E-103 T 22-04-2016 LK04_RS12985 c229b070ea63fd0590bfa27e843bc1eb 240 PANTHER PTHR36122:SF2 133 240 3.8E-120 T 22-04-2016 LK04_RS12985 c229b070ea63fd0590bfa27e843bc1eb 240 PANTHER PTHR36122:SF2 1 110 3.8E-120 T 22-04-2016 LK04_RS12985 c229b070ea63fd0590bfa27e843bc1eb 240 PANTHER PTHR36122 133 240 3.8E-120 T 22-04-2016 LK04_RS12985 c229b070ea63fd0590bfa27e843bc1eb 240 PANTHER PTHR36122 1 110 3.8E-120 T 22-04-2016 LK04_RS12985 c229b070ea63fd0590bfa27e843bc1eb 240 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 9.6E-53 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 LK04_RS12985 c229b070ea63fd0590bfa27e843bc1eb 240 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 231 4.2E-68 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 LK04_RS01465 391dccc53090c15968fefee558d33b6b 579 Pfam PF07244 Surface antigen variable number repeat 191 250 4.9E-8 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 LK04_RS01465 391dccc53090c15968fefee558d33b6b 579 Pfam PF01103 Surface antigen 282 576 9.2E-35 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 LK04_RS01465 391dccc53090c15968fefee558d33b6b 579 PANTHER PTHR12815:SF12 6 579 4.2E-263 T 22-04-2016 LK04_RS01465 391dccc53090c15968fefee558d33b6b 579 PANTHER PTHR12815 6 579 4.2E-263 T 22-04-2016 LK04_RS01465 391dccc53090c15968fefee558d33b6b 579 Gene3D G3DSA:2.40.160.50 307 576 8.6E-24 T 22-04-2016 LK04_RS06335 5d3a90b163dd93ee456bff0739933cb6 106 PIRSF PIRSF028773 1 106 8.8E-51 T 22-04-2016 IPR007458 Protein of unknown function DUF496 LK04_RS06335 5d3a90b163dd93ee456bff0739933cb6 106 Pfam PF04363 Protein of unknown function (DUF496) 8 99 1.1E-44 T 22-04-2016 IPR007458 Protein of unknown function DUF496 LK04_RS06335 5d3a90b163dd93ee456bff0739933cb6 106 PANTHER PTHR39591 1 102 3.5E-56 T 22-04-2016 LK04_RS06335 5d3a90b163dd93ee456bff0739933cb6 106 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 25.011 T 22-04-2016 IPR007458 Protein of unknown function DUF496 LK04_RS06335 5d3a90b163dd93ee456bff0739933cb6 106 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 98 2.0E-39 T 22-04-2016 IPR007458 Protein of unknown function DUF496 LK04_RS10245 37a707db3a71c7a8c5fd559f2b382fd5 79 PANTHER PTHR35175:SF1 1 79 4.6E-46 T 22-04-2016 LK04_RS10245 37a707db3a71c7a8c5fd559f2b382fd5 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 4.0E-18 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 LK04_RS10245 37a707db3a71c7a8c5fd559f2b382fd5 79 PANTHER PTHR35175 1 79 4.6E-46 T 22-04-2016 LK04_RS08595 efe769449b8b9d9af5bd0d0ade292a8f 505 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 84 94 - T 22-04-2016 IPR019819 Carboxylesterase type B, conserved site LK04_RS08595 efe769449b8b9d9af5bd0d0ade292a8f 505 SUPERFAMILY SSF53474 8 481 4.14E-108 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS08595 efe769449b8b9d9af5bd0d0ade292a8f 505 Pfam PF00135 Carboxylesterase family 9 478 2.8E-95 T 22-04-2016 IPR002018 Carboxylesterase, type B LK04_RS08595 efe769449b8b9d9af5bd0d0ade292a8f 505 Gene3D G3DSA:3.40.50.1820 4 496 1.2E-123 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS08595 efe769449b8b9d9af5bd0d0ade292a8f 505 PANTHER PTHR11559 9 489 6.5E-132 T 22-04-2016 LK04_RS08595 efe769449b8b9d9af5bd0d0ade292a8f 505 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 185 200 - T 22-04-2016 IPR019826 Carboxylesterase type B, active site LK04_RS08595 efe769449b8b9d9af5bd0d0ade292a8f 505 PRINTS PR00878 Cholinesterase signature 109 138 1.3E-6 T 22-04-2016 IPR000997 Cholinesterase GO:0004104 LK04_RS08595 efe769449b8b9d9af5bd0d0ade292a8f 505 PRINTS PR00878 Cholinesterase signature 403 415 1.3E-6 T 22-04-2016 IPR000997 Cholinesterase GO:0004104 LK04_RS18535 1f227975627c4130d4cc9f763507c323 308 PANTHER PTHR37689:SF1 4 308 8.8E-108 T 22-04-2016 LK04_RS18535 1f227975627c4130d4cc9f763507c323 308 Hamap MF_00611 Protein FdhE [fdhE]. 3 307 48.714 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 LK04_RS18535 1f227975627c4130d4cc9f763507c323 308 Pfam PF04216 Protein involved in formate dehydrogenase formation 21 305 3.3E-115 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 LK04_RS18535 1f227975627c4130d4cc9f763507c323 308 PANTHER PTHR37689 4 308 8.8E-108 T 22-04-2016 LK04_RS18535 1f227975627c4130d4cc9f763507c323 308 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 306 9.1E-131 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 LK04_RS18535 1f227975627c4130d4cc9f763507c323 308 PIRSF PIRSF018296 1 308 1.9E-131 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 LK04_RS18535 1f227975627c4130d4cc9f763507c323 308 SUPERFAMILY SSF144020 24 307 9.02E-96 T 22-04-2016 IPR024064 FdhE-like LK04_RS18535 1f227975627c4130d4cc9f763507c323 308 Gene3D G3DSA:3.90.1670.10 24 307 6.0E-106 T 22-04-2016 IPR024064 FdhE-like LK04_RS09140 d2314a56adce2314e5b5411c6bf92cba 187 Gene3D G3DSA:1.10.357.10 3 166 5.3E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS09140 d2314a56adce2314e5b5411c6bf92cba 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 2.3E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS09140 d2314a56adce2314e5b5411c6bf92cba 187 PANTHER PTHR30055 5 159 4.4E-14 T 22-04-2016 LK04_RS09140 d2314a56adce2314e5b5411c6bf92cba 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 2.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS09140 d2314a56adce2314e5b5411c6bf92cba 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 2.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS09140 d2314a56adce2314e5b5411c6bf92cba 187 SUPERFAMILY SSF46689 3 68 5.49E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS12530 1961f4aa4c33b94a5ba4ad1f371697c3 263 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 5 260 1.2E-112 T 22-04-2016 IPR010247 N-formylglutamate deformylase LK04_RS12530 1961f4aa4c33b94a5ba4ad1f371697c3 263 SUPERFAMILY SSF53187 3 258 3.61E-78 T 22-04-2016 LK04_RS12530 1961f4aa4c33b94a5ba4ad1f371697c3 263 Pfam PF05013 N-formylglutamate amidohydrolase 12 229 7.9E-66 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase LK04_RS12530 1961f4aa4c33b94a5ba4ad1f371697c3 263 Gene3D G3DSA:3.40.630.40 3 260 2.0E-88 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS12200 723d281957691ca48b8c3d3b1780666a 333 PANTHER PTHR10289 1 333 2.6E-146 T 22-04-2016 LK04_RS12200 723d281957691ca48b8c3d3b1780666a 333 Pfam PF01212 Beta-eliminating lyase 3 282 2.0E-90 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 LK04_RS12200 723d281957691ca48b8c3d3b1780666a 333 Gene3D G3DSA:3.90.1150.10 246 330 2.6E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS12200 723d281957691ca48b8c3d3b1780666a 333 PIRSF PIRSF017617 1 333 7.7E-128 T 22-04-2016 IPR023603 Threonine aldolase LK04_RS12200 723d281957691ca48b8c3d3b1780666a 333 SUPERFAMILY SSF53383 2 330 2.29E-109 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS12200 723d281957691ca48b8c3d3b1780666a 333 Gene3D G3DSA:3.40.640.10 1 245 4.4E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS08295 8b72240852ecd893649cf076a91f7aab 72 ProDom PD052686 LIPOPROTEIN INDUCIBLE OSMOTICALLY B PRECURSOR SIGNAL MEMBRANE PALMITATE TRANSMEMBRANE SURFACE 12 72 7.0E-8 T 22-04-2016 LK04_RS08295 8b72240852ecd893649cf076a91f7aab 72 Pfam PF05433 Glycine zipper 2TM domain 34 70 1.4E-9 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 LK04_RS06555 3d1b24ed8cef9f7608ed6d95ed0c08ac 425 PANTHER PTHR13847 26 390 7.8E-78 T 22-04-2016 LK04_RS06555 3d1b24ed8cef9f7608ed6d95ed0c08ac 425 SUPERFAMILY SSF51905 27 252 1.1E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06555 3d1b24ed8cef9f7608ed6d95ed0c08ac 425 SUPERFAMILY SSF51905 347 398 1.1E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06555 3d1b24ed8cef9f7608ed6d95ed0c08ac 425 PANTHER PTHR13847:SF196 26 390 7.8E-78 T 22-04-2016 LK04_RS06555 3d1b24ed8cef9f7608ed6d95ed0c08ac 425 Gene3D G3DSA:3.50.50.60 23 116 2.1E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06555 3d1b24ed8cef9f7608ed6d95ed0c08ac 425 Gene3D G3DSA:3.50.50.60 173 250 2.1E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06555 3d1b24ed8cef9f7608ed6d95ed0c08ac 425 Gene3D G3DSA:3.50.50.60 347 390 2.1E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06555 3d1b24ed8cef9f7608ed6d95ed0c08ac 425 Pfam PF01266 FAD dependent oxidoreductase 27 383 4.6E-60 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LK04_RS06555 3d1b24ed8cef9f7608ed6d95ed0c08ac 425 Gene3D G3DSA:3.30.9.10 251 346 5.4E-6 T 22-04-2016 LK04_RS06555 3d1b24ed8cef9f7608ed6d95ed0c08ac 425 Gene3D G3DSA:3.30.9.10 121 172 5.4E-6 T 22-04-2016 LK04_RS04995 51cdd904fe6a4061bf5063348352650f 121 PIRSF PIRSF001007 1 120 3.5E-42 T 22-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 LK04_RS04995 51cdd904fe6a4061bf5063348352650f 121 SUPERFAMILY SSF103084 2 116 4.05E-29 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 LK04_RS04995 51cdd904fe6a4061bf5063348352650f 121 Gene3D G3DSA:3.30.1330.70 1 117 1.1E-36 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 LK04_RS04995 51cdd904fe6a4061bf5063348352650f 121 Pfam PF05866 Endodeoxyribonuclease RusA 6 113 5.3E-20 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 Gene3D G3DSA:3.40.190.10 90 175 1.3E-18 T 22-04-2016 LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 Gene3D G3DSA:1.10.10.10 1 84 1.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 SUPERFAMILY SSF53850 89 296 2.17E-45 T 22-04-2016 LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 PANTHER PTHR30346:SF15 1 305 2.7E-149 T 22-04-2016 LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 SUPERFAMILY SSF46785 1 85 2.81E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 Gene3D G3DSA:3.40.190.10 176 267 3.3E-35 T 22-04-2016 LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 PANTHER PTHR30346 1 305 2.7E-149 T 22-04-2016 LK04_RS19680 9df9af7fcc21ea0ae907c778ea642e06 305 Pfam PF03466 LysR substrate binding domain 88 293 3.5E-52 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 PANTHER PTHR11136 1 420 2.4E-132 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 51 74 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 SUPERFAMILY SSF53623 12 281 4.12E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 286 354 1.2E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 411 2.3E-105 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 Gene3D G3DSA:3.90.190.20 287 413 1.4E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 PANTHER PTHR11136:SF0 1 420 2.4E-132 T 22-04-2016 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 Pfam PF08245 Mur ligase middle domain 53 218 5.2E-10 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 SUPERFAMILY SSF53244 285 411 2.59E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 PIRSF PIRSF001563 5 418 2.6E-104 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 Gene3D G3DSA:3.40.1190.10 11 280 1.1E-88 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LK04_RS05370 0b2dc18bd298eddb86fca96171c4a9f5 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 LK04_RS11580 7a51070bc972aedccd270fcbe3d8bc12 138 PANTHER PTHR31793 9 134 1.5E-33 T 22-04-2016 LK04_RS11580 7a51070bc972aedccd270fcbe3d8bc12 138 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 14 121 2.3E-21 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LK04_RS11580 7a51070bc972aedccd270fcbe3d8bc12 138 PANTHER PTHR31793:SF9 9 134 1.5E-33 T 22-04-2016 LK04_RS11580 7a51070bc972aedccd270fcbe3d8bc12 138 PIRSF PIRSF003230 1 134 2.7E-23 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LK04_RS11580 7a51070bc972aedccd270fcbe3d8bc12 138 Gene3D G3DSA:3.10.129.10 9 132 2.2E-39 T 22-04-2016 IPR029069 HotDog domain LK04_RS11580 7a51070bc972aedccd270fcbe3d8bc12 138 Pfam PF13279 Thioesterase-like superfamily 14 121 1.1E-11 T 22-04-2016 LK04_RS11580 7a51070bc972aedccd270fcbe3d8bc12 138 SUPERFAMILY SSF54637 9 132 8.85E-34 T 22-04-2016 IPR029069 HotDog domain LK04_RS00430 e20bc930896991d3e44665589094de2a 309 SUPERFAMILY SSF53850 12 280 5.85E-65 T 22-04-2016 LK04_RS00430 e20bc930896991d3e44665589094de2a 309 PANTHER PTHR30006:SF6 1 276 1.8E-56 T 22-04-2016 LK04_RS00430 e20bc930896991d3e44665589094de2a 309 Gene3D G3DSA:3.40.190.10 11 109 2.0E-39 T 22-04-2016 LK04_RS00430 e20bc930896991d3e44665589094de2a 309 Gene3D G3DSA:3.40.190.10 245 284 2.0E-39 T 22-04-2016 LK04_RS00430 e20bc930896991d3e44665589094de2a 309 PIRSF PIRSF002825 3 296 3.7E-56 T 22-04-2016 IPR026045 Ferric binding protein LK04_RS00430 e20bc930896991d3e44665589094de2a 309 Gene3D G3DSA:3.40.190.10 111 244 2.6E-32 T 22-04-2016 LK04_RS00430 e20bc930896991d3e44665589094de2a 309 Pfam PF13343 Bacterial extracellular solute-binding protein 61 272 2.5E-32 T 22-04-2016 LK04_RS00430 e20bc930896991d3e44665589094de2a 309 PANTHER PTHR30006 1 276 1.8E-56 T 22-04-2016 LK04_RS12765 cde702137f9087633e6901db69b0d61f 340 PANTHER PTHR21535 101 339 5.3E-16 T 22-04-2016 LK04_RS12765 cde702137f9087633e6901db69b0d61f 340 Gene3D G3DSA:3.30.460.20 39 150 4.8E-4 T 22-04-2016 LK04_RS12765 cde702137f9087633e6901db69b0d61f 340 Pfam PF01544 CorA-like Mg2+ transporter protein 53 334 4.7E-47 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 LK04_RS12765 cde702137f9087633e6901db69b0d61f 340 Gene3D G3DSA:1.20.58.340 268 339 4.6E-17 T 22-04-2016 LK04_RS12765 cde702137f9087633e6901db69b0d61f 340 Gene3D G3DSA:1.20.58.340 172 236 2.0E-4 T 22-04-2016 LK04_RS12765 cde702137f9087633e6901db69b0d61f 340 SUPERFAMILY SSF143865 19 272 6.02E-32 T 22-04-2016 LK04_RS12765 cde702137f9087633e6901db69b0d61f 340 SUPERFAMILY SSF144083 277 338 7.85E-15 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 Gene3D G3DSA:3.90.640.10 331 378 2.2E-4 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 PANTHER PTHR19375 331 442 1.1E-128 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 PANTHER PTHR19375 2 44 1.1E-128 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 PANTHER PTHR19375 85 269 1.1E-128 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 Gene3D G3DSA:3.30.420.40 379 432 1.0E-13 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 Gene3D G3DSA:3.30.420.40 218 241 1.0E-13 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 SUPERFAMILY SSF53067 85 204 1.13E-26 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 SUPERFAMILY SSF53067 1 44 1.13E-26 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 PANTHER PTHR19375:SF182 331 442 1.1E-128 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 PANTHER PTHR19375:SF182 2 44 1.1E-128 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 PANTHER PTHR19375:SF182 85 269 1.1E-128 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 Pfam PF00012 Hsp70 protein 129 228 1.0E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 Pfam PF00012 Hsp70 protein 331 448 1.4E-8 T 22-04-2016 IPR013126 Heat shock protein 70 family LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 Gene3D G3DSA:3.30.420.40 2 43 2.7E-29 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 Gene3D G3DSA:3.30.420.40 85 217 2.7E-29 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 SUPERFAMILY SSF53067 208 276 5.99E-31 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 SUPERFAMILY SSF53067 328 447 5.99E-31 T 22-04-2016 LK04_RS06020 6a4275c7b40daee654a58298b4d6e465 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site LK04_RS08820 005774672d50ebf7b94948cbf55bdd54 166 Pfam PF08808 RES domain 14 160 2.3E-23 T 22-04-2016 IPR014914 RES domain LK04_RS08820 005774672d50ebf7b94948cbf55bdd54 166 SMART SM00953 26 153 3.2E-16 T 22-04-2016 IPR014914 RES domain LK04_RS18350 b0aec57d38c17471af905f4a3bcf186a 536 SUPERFAMILY SSF53850 29 533 1.47E-163 T 22-04-2016 LK04_RS18350 b0aec57d38c17471af905f4a3bcf186a 536 PANTHER PTHR30290:SF14 1 536 4.6E-233 T 22-04-2016 LK04_RS18350 b0aec57d38c17471af905f4a3bcf186a 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 2.9E-109 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS18350 b0aec57d38c17471af905f4a3bcf186a 536 PANTHER PTHR30290 1 536 4.6E-233 T 22-04-2016 LK04_RS18350 b0aec57d38c17471af905f4a3bcf186a 536 PIRSF PIRSF002741 22 536 6.0E-122 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS18350 b0aec57d38c17471af905f4a3bcf186a 536 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site LK04_RS18350 b0aec57d38c17471af905f4a3bcf186a 536 Gene3D G3DSA:3.10.105.10 303 505 5.5E-70 T 22-04-2016 LK04_RS18350 b0aec57d38c17471af905f4a3bcf186a 536 Gene3D G3DSA:3.40.190.10 152 302 9.0E-50 T 22-04-2016 LK04_RS02570 a5089a13a8cf9dad9b090f6d0eb9a623 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02570 a5089a13a8cf9dad9b090f6d0eb9a623 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02570 a5089a13a8cf9dad9b090f6d0eb9a623 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02570 a5089a13a8cf9dad9b090f6d0eb9a623 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02570 a5089a13a8cf9dad9b090f6d0eb9a623 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02570 a5089a13a8cf9dad9b090f6d0eb9a623 241 PANTHER PTHR24322 11 178 6.8E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS02570 a5089a13a8cf9dad9b090f6d0eb9a623 241 Gene3D G3DSA:3.40.50.720 2 239 1.1E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02570 a5089a13a8cf9dad9b090f6d0eb9a623 241 SUPERFAMILY SSF51735 5 240 1.81E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS02570 a5089a13a8cf9dad9b090f6d0eb9a623 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 238 3.6E-33 T 22-04-2016 LK04_RS01770 387b11c9e885b9495f6837d70c967adf 234 PANTHER PTHR33778 1 228 6.6E-110 T 22-04-2016 LK04_RS01770 387b11c9e885b9495f6837d70c967adf 234 PANTHER PTHR33778:SF3 1 228 6.6E-110 T 22-04-2016 LK04_RS01770 387b11c9e885b9495f6837d70c967adf 234 Pfam PF02308 MgtC family 11 131 4.1E-35 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LK04_RS01770 387b11c9e885b9495f6837d70c967adf 234 PRINTS PR01837 MgtC/SapB protein signature 59 81 1.8E-43 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LK04_RS01770 387b11c9e885b9495f6837d70c967adf 234 PRINTS PR01837 MgtC/SapB protein signature 86 110 1.8E-43 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LK04_RS01770 387b11c9e885b9495f6837d70c967adf 234 PRINTS PR01837 MgtC/SapB protein signature 32 50 1.8E-43 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LK04_RS01770 387b11c9e885b9495f6837d70c967adf 234 PRINTS PR01837 MgtC/SapB protein signature 13 32 1.8E-43 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LK04_RS08210 23d45516cc0401aacb5cc328b511c2b2 206 SUPERFAMILY SSF55821 1 203 3.66E-64 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LK04_RS08210 23d45516cc0401aacb5cc328b511c2b2 206 PANTHER PTHR17490 1 205 5.8E-99 T 22-04-2016 LK04_RS08210 23d45516cc0401aacb5cc328b511c2b2 206 Gene3D G3DSA:3.90.870.10 2 202 1.3E-62 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LK04_RS08210 23d45516cc0401aacb5cc328b511c2b2 206 PANTHER PTHR17490:SF7 1 205 5.8E-99 T 22-04-2016 LK04_RS08210 23d45516cc0401aacb5cc328b511c2b2 206 Pfam PF01300 Telomere recombination 23 198 7.6E-45 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 LK04_RS08210 23d45516cc0401aacb5cc328b511c2b2 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 1.7E-72 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 LK04_RS07100 fe19efa835732bf33cbd1d307b1addec 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 4.4E-127 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS07100 fe19efa835732bf33cbd1d307b1addec 494 PANTHER PTHR11819:SF148 4 478 1.8E-191 T 22-04-2016 LK04_RS07100 fe19efa835732bf33cbd1d307b1addec 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 5.5E-228 T 22-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 LK04_RS07100 fe19efa835732bf33cbd1d307b1addec 494 PANTHER PTHR11819 4 478 1.8E-191 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS07100 fe19efa835732bf33cbd1d307b1addec 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LK04_RS07100 fe19efa835732bf33cbd1d307b1addec 494 Pfam PF00474 Sodium:solute symporter family 35 437 2.7E-138 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS07100 fe19efa835732bf33cbd1d307b1addec 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LK04_RS00925 8ac3e9009bad6ee60af794d105634beb 104 SMART SM00739 4 31 7.4E-4 T 22-04-2016 IPR005824 KOW LK04_RS00925 8ac3e9009bad6ee60af794d105634beb 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 5.3E-23 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00925 8ac3e9009bad6ee60af794d105634beb 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.25 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00925 8ac3e9009bad6ee60af794d105634beb 104 PANTHER PTHR12903 4 103 1.4E-47 T 22-04-2016 LK04_RS00925 8ac3e9009bad6ee60af794d105634beb 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.5E-39 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00925 8ac3e9009bad6ee60af794d105634beb 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00925 8ac3e9009bad6ee60af794d105634beb 104 Gene3D G3DSA:2.30.30.30 3 92 1.2E-21 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 LK04_RS00925 8ac3e9009bad6ee60af794d105634beb 104 SUPERFAMILY SSF50104 4 100 6.02E-33 T 22-04-2016 IPR008991 Translation protein SH3-like domain LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 Pfam PF00155 Aminotransferase class I and II 134 437 8.5E-23 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 4.5E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 4.5E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 SMART SM00345 26 84 4.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 SUPERFAMILY SSF46785 16 81 1.86E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 Gene3D G3DSA:3.40.640.10 149 372 9.3E-56 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 Gene3D G3DSA:1.10.10.10 14 80 1.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 81 7.0E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 PANTHER PTHR11751 101 480 7.8E-116 T 22-04-2016 LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 PANTHER PTHR11751:SF10 101 480 7.8E-116 T 22-04-2016 LK04_RS16095 cefdcace26d0dff2361a37c64959cee9 482 SUPERFAMILY SSF53383 124 480 4.43E-83 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS05205 322a57fa9f030dda78588859ce8bd5ee 161 PANTHER PTHR34128:SF1 2 157 1.6E-72 T 22-04-2016 LK04_RS05205 322a57fa9f030dda78588859ce8bd5ee 161 PANTHER PTHR34128 2 157 1.6E-72 T 22-04-2016 LK04_RS05205 322a57fa9f030dda78588859ce8bd5ee 161 Gene3D G3DSA:2.40.50.140 26 131 5.3E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS05205 322a57fa9f030dda78588859ce8bd5ee 161 SUPERFAMILY SSF82093 30 143 1.44E-40 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LK04_RS05205 322a57fa9f030dda78588859ce8bd5ee 161 Pfam PF03100 CcmE 4 137 1.5E-44 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LK04_RS05205 322a57fa9f030dda78588859ce8bd5ee 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 32.865 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LK04_RS11375 8c821d2bf5ef4a2ef4cf51b0a199951b 260 PANTHER PTHR30435 1 260 1.7E-135 T 22-04-2016 LK04_RS11375 8c821d2bf5ef4a2ef4cf51b0a199951b 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 7.3E-118 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 LK04_RS11375 8c821d2bf5ef4a2ef4cf51b0a199951b 260 Pfam PF00460 Flagella basal body rod protein 5 35 7.7E-14 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LK04_RS11375 8c821d2bf5ef4a2ef4cf51b0a199951b 260 PANTHER PTHR30435:SF19 1 260 1.7E-135 T 22-04-2016 LK04_RS11375 8c821d2bf5ef4a2ef4cf51b0a199951b 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 2.0E-49 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LK04_RS11375 8c821d2bf5ef4a2ef4cf51b0a199951b 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 6.0E-30 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LK04_RS11375 8c821d2bf5ef4a2ef4cf51b0a199951b 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 1.3E-25 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LK04_RS11375 8c821d2bf5ef4a2ef4cf51b0a199951b 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site LK04_RS11375 8c821d2bf5ef4a2ef4cf51b0a199951b 260 SUPERFAMILY SSF117143 93 222 3.14E-35 T 22-04-2016 LK04_RS05860 2db3250d7ff4b4b61c99815a733a588f 239 PANTHER PTHR30336:SF0 2 238 8.5E-119 T 22-04-2016 LK04_RS05860 2db3250d7ff4b4b61c99815a733a588f 239 PANTHER PTHR30336 2 238 8.5E-119 T 22-04-2016 LK04_RS05860 2db3250d7ff4b4b61c99815a733a588f 239 Pfam PF02698 DUF218 domain 48 170 6.6E-19 T 22-04-2016 IPR003848 Domain of unknown function DUF218 LK04_RS05860 2db3250d7ff4b4b61c99815a733a588f 239 PIRSF PIRSF005011 1 239 3.9E-148 T 22-04-2016 IPR023604 Uncharacterised protein family SanA LK04_RS05860 2db3250d7ff4b4b61c99815a733a588f 239 Gene3D G3DSA:3.40.50.620 42 170 1.9E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS19250 3f982e48cfd451f452591e8024f00606 311 PANTHER PTHR11695 13 272 1.1E-48 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LK04_RS19250 3f982e48cfd451f452591e8024f00606 311 Pfam PF00107 Zinc-binding dehydrogenase 145 263 3.0E-8 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LK04_RS19250 3f982e48cfd451f452591e8024f00606 311 SMART SM00829 16 267 2.2E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LK04_RS19250 3f982e48cfd451f452591e8024f00606 311 PANTHER PTHR11695:SF607 13 272 1.1E-48 T 22-04-2016 LK04_RS19250 3f982e48cfd451f452591e8024f00606 311 SUPERFAMILY SSF51735 104 276 2.41E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS19250 3f982e48cfd451f452591e8024f00606 311 Gene3D G3DSA:3.90.180.10 1 136 4.9E-21 T 22-04-2016 IPR011032 GroES-like LK04_RS19250 3f982e48cfd451f452591e8024f00606 311 SUPERFAMILY SSF50129 1 137 2.83E-19 T 22-04-2016 IPR011032 GroES-like LK04_RS19250 3f982e48cfd451f452591e8024f00606 311 Gene3D G3DSA:3.40.50.720 137 256 1.4E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS09535 6f00a8f45f57c5be7fb5972d5a03f4de 99 SMART SM00530 31 86 4.5E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS09535 6f00a8f45f57c5be7fb5972d5a03f4de 99 SUPERFAMILY SSF47413 30 92 8.31E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS09535 6f00a8f45f57c5be7fb5972d5a03f4de 99 Pfam PF01381 Helix-turn-helix 33 81 1.3E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS09535 6f00a8f45f57c5be7fb5972d5a03f4de 99 Gene3D G3DSA:1.10.260.40 32 84 1.0E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS11035 bea217c151071ddf83dbd89bb2c8839b 313 SUPERFAMILY SSF53822 26 305 1.52E-75 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS11035 bea217c151071ddf83dbd89bb2c8839b 313 PANTHER PTHR32196 8 302 1.2E-80 T 22-04-2016 LK04_RS11035 bea217c151071ddf83dbd89bb2c8839b 313 PANTHER PTHR32196:SF9 8 302 1.2E-80 T 22-04-2016 LK04_RS11035 bea217c151071ddf83dbd89bb2c8839b 313 Gene3D G3DSA:3.40.50.2300 24 143 7.7E-35 T 22-04-2016 LK04_RS11035 bea217c151071ddf83dbd89bb2c8839b 313 Pfam PF13407 Periplasmic binding protein domain 29 283 5.6E-58 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS11035 bea217c151071ddf83dbd89bb2c8839b 313 Gene3D G3DSA:3.40.50.2300 144 305 1.9E-48 T 22-04-2016 LK04_RS12115 fa7fb02b36e0f59fbbfc5692eb2c721f 383 PANTHER PTHR23521 2 382 8.1E-195 T 22-04-2016 LK04_RS12115 fa7fb02b36e0f59fbbfc5692eb2c721f 383 SUPERFAMILY SSF103473 6 372 5.62E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS12115 fa7fb02b36e0f59fbbfc5692eb2c721f 383 PANTHER PTHR23521:SF1 2 382 8.1E-195 T 22-04-2016 LK04_RS12115 fa7fb02b36e0f59fbbfc5692eb2c721f 383 Pfam PF07690 Major Facilitator Superfamily 11 283 9.9E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS12115 fa7fb02b36e0f59fbbfc5692eb2c721f 383 Gene3D G3DSA:1.20.1250.20 200 371 1.9E-17 T 22-04-2016 LK04_RS12115 fa7fb02b36e0f59fbbfc5692eb2c721f 383 Gene3D G3DSA:1.20.1250.20 6 180 9.6E-18 T 22-04-2016 LK04_RS16900 4fb8cd39522976eec8006053bce5c04b 96 Pfam PF07045 Domain of unknown function (DUF1330) 3 95 2.9E-22 T 22-04-2016 IPR010753 Domain of unknown function DUF1330 LK04_RS16900 4fb8cd39522976eec8006053bce5c04b 96 SUPERFAMILY SSF54909 1 95 2.68E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS16900 4fb8cd39522976eec8006053bce5c04b 96 Gene3D G3DSA:3.30.70.900 1 95 5.4E-24 T 22-04-2016 LK04_RS12310 cca725af3a27024a8d2115f7e3794605 210 Pfam PF01569 PAP2 superfamily 69 192 9.3E-9 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS12310 cca725af3a27024a8d2115f7e3794605 210 SUPERFAMILY SSF48317 4 191 1.5E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS12310 cca725af3a27024a8d2115f7e3794605 210 Gene3D G3DSA:1.20.144.10 47 174 4.6E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS12105 32ca832262e47ba9041d60cf641c2703 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 LK04_RS12105 32ca832262e47ba9041d60cf641c2703 760 Gene3D G3DSA:3.20.70.20 5 759 0.0 T 22-04-2016 LK04_RS12105 32ca832262e47ba9041d60cf641c2703 760 PIRSF PIRSF000379 8 760 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 LK04_RS12105 32ca832262e47ba9041d60cf641c2703 760 PANTHER PTHR30191 9 760 0.0 T 22-04-2016 LK04_RS12105 32ca832262e47ba9041d60cf641c2703 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LK04_RS12105 32ca832262e47ba9041d60cf641c2703 760 Pfam PF01228 Glycine radical 630 741 1.9E-43 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 LK04_RS12105 32ca832262e47ba9041d60cf641c2703 760 SUPERFAMILY SSF51998 4 759 1.4E-289 T 22-04-2016 LK04_RS12105 32ca832262e47ba9041d60cf641c2703 760 PANTHER PTHR30191:SF7 9 760 0.0 T 22-04-2016 LK04_RS12105 32ca832262e47ba9041d60cf641c2703 760 Pfam PF02901 Pyruvate formate lyase-like 26 614 7.9E-203 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 LK04_RS12505 5509646d2f4bb59913b41bceaa309511 492 Gene3D G3DSA:1.20.200.10 194 491 3.2E-106 T 22-04-2016 LK04_RS12505 5509646d2f4bb59913b41bceaa309511 492 PANTHER PTHR10362:SF7 2 490 1.3E-182 T 22-04-2016 LK04_RS12505 5509646d2f4bb59913b41bceaa309511 492 PANTHER PTHR10362 2 490 1.3E-182 T 22-04-2016 LK04_RS12505 5509646d2f4bb59913b41bceaa309511 492 Pfam PF00221 Aromatic amino acid lyase 10 466 7.1E-159 T 22-04-2016 IPR001106 Aromatic amino acid lyase LK04_RS12505 5509646d2f4bb59913b41bceaa309511 492 SUPERFAMILY SSF48557 2 490 7.85E-158 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 LK04_RS12505 5509646d2f4bb59913b41bceaa309511 492 Gene3D G3DSA:1.10.275.10 2 193 7.1E-56 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LK04_RS02715 6b89ddb4dc4bff518975481a04a5d9c5 235 SUPERFAMILY SSF51419 1 225 5.63E-80 T 22-04-2016 IPR029066 PLP-binding barrel LK04_RS02715 6b89ddb4dc4bff518975481a04a5d9c5 235 PANTHER PTHR10146 3 231 3.8E-106 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 LK04_RS02715 6b89ddb4dc4bff518975481a04a5d9c5 235 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 2.7E-95 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 LK04_RS02715 6b89ddb4dc4bff518975481a04a5d9c5 235 PIRSF PIRSF004848 1 233 4.1E-75 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 LK04_RS02715 6b89ddb4dc4bff518975481a04a5d9c5 235 Pfam PF01168 Alanine racemase, N-terminal domain 7 227 1.5E-29 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LK04_RS02715 6b89ddb4dc4bff518975481a04a5d9c5 235 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 LK04_RS02715 6b89ddb4dc4bff518975481a04a5d9c5 235 Gene3D G3DSA:3.20.20.10 1 231 1.7E-94 T 22-04-2016 IPR029066 PLP-binding barrel LK04_RS13545 2d96475fd160ac50b4920ff9565cd24c 344 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 24 305 5.5E-63 T 22-04-2016 IPR010732 Type VI secretion, TssG-like LK04_RS13545 2d96475fd160ac50b4920ff9565cd24c 344 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 23 306 9.7E-56 T 22-04-2016 IPR010732 Type VI secretion, TssG-like LK04_RS13545 2d96475fd160ac50b4920ff9565cd24c 344 PANTHER PTHR35564 4 341 1.6E-74 T 22-04-2016 LK04_RS13545 2d96475fd160ac50b4920ff9565cd24c 344 PANTHER PTHR35564:SF3 4 341 1.6E-74 T 22-04-2016 LK04_RS14265 5a38c1df43ddacfd3cd8b6831e24f685 250 PANTHER PTHR30136 1 249 7.8E-42 T 22-04-2016 LK04_RS14265 5a38c1df43ddacfd3cd8b6831e24f685 250 Gene3D G3DSA:1.10.10.10 2 67 2.9E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14265 5a38c1df43ddacfd3cd8b6831e24f685 250 Gene3D G3DSA:3.30.450.40 80 248 1.4E-35 T 22-04-2016 IPR029016 GAF domain-like LK04_RS14265 5a38c1df43ddacfd3cd8b6831e24f685 250 Pfam PF01614 Bacterial transcriptional regulator 130 242 1.4E-18 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal LK04_RS14265 5a38c1df43ddacfd3cd8b6831e24f685 250 SUPERFAMILY SSF55781 64 246 1.24E-34 T 22-04-2016 IPR029016 GAF domain-like LK04_RS14265 5a38c1df43ddacfd3cd8b6831e24f685 250 SMART SM00346 1 95 8.7E-15 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS14265 5a38c1df43ddacfd3cd8b6831e24f685 250 SUPERFAMILY SSF46785 2 78 1.28E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14265 5a38c1df43ddacfd3cd8b6831e24f685 250 PANTHER PTHR30136:SF7 1 249 7.8E-42 T 22-04-2016 LK04_RS14265 5a38c1df43ddacfd3cd8b6831e24f685 250 Pfam PF09339 IclR helix-turn-helix domain 3 59 1.2E-12 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS04265 992617938ccaa1a5437877acd2b5be87 108 PANTHER PTHR41791:SF1 8 108 1.8E-20 T 22-04-2016 LK04_RS04265 992617938ccaa1a5437877acd2b5be87 108 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 14 105 2.5E-32 T 22-04-2016 IPR014056 Addiction module killer protein, predicted LK04_RS04265 992617938ccaa1a5437877acd2b5be87 108 PIRSF PIRSF028744 2 108 1.1E-35 T 22-04-2016 IPR014056 Addiction module killer protein, predicted LK04_RS04265 992617938ccaa1a5437877acd2b5be87 108 PANTHER PTHR41791 8 108 1.8E-20 T 22-04-2016 LK04_RS04265 992617938ccaa1a5437877acd2b5be87 108 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 28 92 3.1E-6 T 22-04-2016 IPR009241 Toxin HigB-like LK04_RS07780 248cb96c296f21244e6c942324e027fe 91 Pfam PF13974 YebO-like protein 16 91 4.3E-31 T 22-04-2016 IPR025594 YebO-like protein LK04_RS18925 d84b57b15d7f1da7c62ad24ebfafb8f8 230 SUPERFAMILY SSF103515 85 226 7.19E-8 T 22-04-2016 IPR005546 Autotransporter beta-domain LK04_RS18925 d84b57b15d7f1da7c62ad24ebfafb8f8 230 Gene3D G3DSA:2.40.128.130 142 213 5.3E-4 T 22-04-2016 IPR005546 Autotransporter beta-domain LK04_RS12635 0265b3890e929a0a0f60841c21bd88a0 172 SUPERFAMILY SSF55729 3 170 2.45E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS12635 0265b3890e929a0a0f60841c21bd88a0 172 PANTHER PTHR23091 19 154 1.2E-19 T 22-04-2016 LK04_RS12635 0265b3890e929a0a0f60841c21bd88a0 172 PANTHER PTHR23091:SF243 19 154 1.2E-19 T 22-04-2016 LK04_RS12635 0265b3890e929a0a0f60841c21bd88a0 172 Gene3D G3DSA:3.40.630.30 1 169 1.4E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS12635 0265b3890e929a0a0f60841c21bd88a0 172 Pfam PF13673 Acetyltransferase (GNAT) domain 56 147 1.5E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 Gene3D G3DSA:1.20.1250.20 38 200 3.3E-10 T 22-04-2016 LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 PANTHER PTHR23501:SF71 4 461 3.3E-90 T 22-04-2016 LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 PANTHER PTHR23501:SF71 486 517 3.3E-90 T 22-04-2016 LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 SUPERFAMILY SSF103473 210 431 6.67E-9 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 SUPERFAMILY SSF103473 491 518 6.67E-9 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 Gene3D G3DSA:1.20.1250.20 496 515 1.3E-6 T 22-04-2016 LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 Gene3D G3DSA:1.20.1250.20 272 432 1.3E-6 T 22-04-2016 LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 Pfam PF07690 Major Facilitator Superfamily 25 421 1.2E-25 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 PANTHER PTHR23501 4 461 3.3E-90 T 22-04-2016 LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 PANTHER PTHR23501 486 517 3.3E-90 T 22-04-2016 LK04_RS04835 8031394d81e44d306cf6eed4bd4367b0 533 SUPERFAMILY SSF103473 11 201 2.49E-20 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS16620 6b872e1bf97c0aab9727996c94fc8ac3 184 PANTHER PTHR36504 1 184 2.6E-48 T 22-04-2016 LK04_RS16620 6b872e1bf97c0aab9727996c94fc8ac3 184 Pfam PF03968 OstA-like protein 37 149 2.6E-30 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal LK04_RS16620 6b872e1bf97c0aab9727996c94fc8ac3 184 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 168 25.953 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 LK04_RS16620 6b872e1bf97c0aab9727996c94fc8ac3 184 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 27 167 1.1E-48 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 LK04_RS16620 6b872e1bf97c0aab9727996c94fc8ac3 184 Gene3D G3DSA:2.60.450.10 28 164 5.2E-40 T 22-04-2016 LK04_RS10725 d410282c5f69694ba5c2d43ec9923a79 352 Pfam PF03601 Conserved hypothetical protein 698 18 329 4.9E-110 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 LK04_RS10725 d410282c5f69694ba5c2d43ec9923a79 352 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 15 348 3.0E-129 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 LK04_RS10725 d410282c5f69694ba5c2d43ec9923a79 352 PANTHER PTHR30106 2 352 5.6E-135 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 LK04_RS10725 d410282c5f69694ba5c2d43ec9923a79 352 PANTHER PTHR30106:SF2 2 352 5.6E-135 T 22-04-2016 LK04_RS13990 3749d232bf2e0a989aba8271f88581d5 104 SUPERFAMILY SSF82657 1 88 4.84E-31 T 22-04-2016 IPR002634 BolA protein LK04_RS13990 3749d232bf2e0a989aba8271f88581d5 104 PANTHER PTHR12735:SF23 1 103 5.5E-63 T 22-04-2016 LK04_RS13990 3749d232bf2e0a989aba8271f88581d5 104 Gene3D G3DSA:3.30.300.90 1 100 4.1E-32 T 22-04-2016 IPR002634 BolA protein LK04_RS13990 3749d232bf2e0a989aba8271f88581d5 104 Pfam PF01722 BolA-like protein 10 83 1.1E-29 T 22-04-2016 IPR002634 BolA protein LK04_RS13990 3749d232bf2e0a989aba8271f88581d5 104 PANTHER PTHR12735 1 103 5.5E-63 T 22-04-2016 LK04_RS13990 3749d232bf2e0a989aba8271f88581d5 104 PIRSF PIRSF003113 1 99 1.1E-32 T 22-04-2016 IPR002634 BolA protein LK04_RS09145 f5ffdd12b3a9392e9cc7f02e87264f44 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 2.5E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS09145 f5ffdd12b3a9392e9cc7f02e87264f44 193 SUPERFAMILY SSF46689 11 68 3.54E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS09145 f5ffdd12b3a9392e9cc7f02e87264f44 193 PANTHER PTHR30055 1 183 1.3E-13 T 22-04-2016 LK04_RS09145 f5ffdd12b3a9392e9cc7f02e87264f44 193 Gene3D G3DSA:1.10.357.10 11 177 8.6E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LK04_RS09145 f5ffdd12b3a9392e9cc7f02e87264f44 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 3.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS09145 f5ffdd12b3a9392e9cc7f02e87264f44 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 3.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LK04_RS09145 f5ffdd12b3a9392e9cc7f02e87264f44 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 Pfam PF00154 recA bacterial DNA recombination protein 9 270 3.7E-143 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 PANTHER PTHR22942:SF1 1 337 4.9E-206 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 ProSitePatterns PS00321 recA signature. 215 223 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 Gene3D G3DSA:3.30.250.10 272 327 1.1E-27 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 SMART SM00382 59 230 1.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 SUPERFAMILY SSF54752 271 326 7.85E-21 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 Gene3D G3DSA:3.40.50.300 28 269 2.1E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 Hamap MF_00268 Protein RecA [recA]. 7 331 51.065 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 2.8E-172 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 PANTHER PTHR22942 1 337 4.9E-206 T 22-04-2016 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 PRINTS PR00142 RecA protein signature 95 124 4.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 PRINTS PR00142 RecA protein signature 212 240 4.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 PRINTS PR00142 RecA protein signature 129 158 4.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 PRINTS PR00142 RecA protein signature 299 316 4.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 PRINTS PR00142 RecA protein signature 167 196 4.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 PRINTS PR00142 RecA protein signature 245 274 4.1E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LK04_RS03570 93131d3635b04d5d9d6e77dad65c8957 356 SUPERFAMILY SSF52540 6 269 5.58E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00220 4e8c75e9050118ee94a0546261e1ea06 165 PANTHER PTHR38596 1 161 2.1E-91 T 22-04-2016 LK04_RS00220 4e8c75e9050118ee94a0546261e1ea06 165 PANTHER PTHR38596:SF1 1 161 2.1E-91 T 22-04-2016 LK04_RS00220 4e8c75e9050118ee94a0546261e1ea06 165 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 165 88.891 T 22-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 LK04_RS00220 4e8c75e9050118ee94a0546261e1ea06 165 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 1.1E-71 T 22-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria LK04_RS00220 4e8c75e9050118ee94a0546261e1ea06 165 Pfam PF03350 Uncharacterized protein family, UPF0114 9 124 4.0E-35 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 LK04_RS07925 2fd625990c390f63937519b65091a433 433 Gene3D G3DSA:3.50.50.60 359 426 3.4E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07925 2fd625990c390f63937519b65091a433 433 Gene3D G3DSA:3.50.50.60 1 55 3.4E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07925 2fd625990c390f63937519b65091a433 433 Gene3D G3DSA:3.50.50.60 108 122 3.4E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07925 2fd625990c390f63937519b65091a433 433 Gene3D G3DSA:3.50.50.60 190 269 3.4E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07925 2fd625990c390f63937519b65091a433 433 SUPERFAMILY SSF51905 107 271 2.46E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07925 2fd625990c390f63937519b65091a433 433 SUPERFAMILY SSF51905 1 54 2.46E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07925 2fd625990c390f63937519b65091a433 433 SUPERFAMILY SSF51905 359 418 2.46E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS07925 2fd625990c390f63937519b65091a433 433 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.8E-69 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LK04_RS07925 2fd625990c390f63937519b65091a433 433 SUPERFAMILY SSF54373 269 359 1.26E-17 T 22-04-2016 LK04_RS07925 2fd625990c390f63937519b65091a433 433 PANTHER PTHR13847 1 63 2.8E-243 T 22-04-2016 LK04_RS07925 2fd625990c390f63937519b65091a433 433 PANTHER PTHR13847 107 420 2.8E-243 T 22-04-2016 LK04_RS07925 2fd625990c390f63937519b65091a433 433 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 52.01 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 LK04_RS07925 2fd625990c390f63937519b65091a433 433 Gene3D G3DSA:3.30.9.10 270 358 6.2E-16 T 22-04-2016 LK04_RS07925 2fd625990c390f63937519b65091a433 433 Gene3D G3DSA:3.30.9.10 135 189 6.2E-16 T 22-04-2016 LK04_RS07925 2fd625990c390f63937519b65091a433 433 PANTHER PTHR13847:SF148 1 63 2.8E-243 T 22-04-2016 LK04_RS07925 2fd625990c390f63937519b65091a433 433 PANTHER PTHR13847:SF148 107 420 2.8E-243 T 22-04-2016 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 SUPERFAMILY SSF52949 1 184 1.77E-51 T 22-04-2016 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 PANTHER PTHR11963:SF13 7 503 1.8E-263 T 22-04-2016 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 Gene3D G3DSA:3.40.630.10 171 496 1.2E-137 T 22-04-2016 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 2.2E-53 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 2.2E-53 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 2.2E-53 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 2.2E-53 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 2.2E-53 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 Gene3D G3DSA:3.40.220.10 1 161 1.1E-65 T 22-04-2016 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 7.5E-119 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 40.724 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.3E-33 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 PANTHER PTHR11963 7 503 1.8E-263 T 22-04-2016 LK04_RS16255 062634091e79b5e4dd523bc923add792 503 SUPERFAMILY SSF53187 180 496 4.71E-125 T 22-04-2016 LK04_RS13520 94fef4565f8eb4f133f1bae5e0b3daa5 186 SUPERFAMILY SSF51161 27 174 6.24E-24 T 22-04-2016 IPR011004 Trimeric LpxA-like LK04_RS13520 94fef4565f8eb4f133f1bae5e0b3daa5 186 PANTHER PTHR23416 62 173 1.9E-12 T 22-04-2016 LK04_RS13520 94fef4565f8eb4f133f1bae5e0b3daa5 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 165 4.7E-6 T 22-04-2016 IPR001451 Hexapeptide repeat LK04_RS13520 94fef4565f8eb4f133f1bae5e0b3daa5 186 Gene3D G3DSA:2.160.10.10 18 26 1.8E-20 T 22-04-2016 LK04_RS13520 94fef4565f8eb4f133f1bae5e0b3daa5 186 Gene3D G3DSA:2.160.10.10 74 174 1.8E-20 T 22-04-2016 LK04_RS17155 3413955c60d8d8bfea09f7922cd9068b 135 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 127 1.2E-42 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system LK04_RS17155 3413955c60d8d8bfea09f7922cd9068b 135 PANTHER PTHR34873 1 135 1.2E-41 T 22-04-2016 LK04_RS17155 3413955c60d8d8bfea09f7922cd9068b 135 PANTHER PTHR34873:SF2 1 135 1.2E-41 T 22-04-2016 LK04_RS17155 3413955c60d8d8bfea09f7922cd9068b 135 SUPERFAMILY SSF143100 1 66 9.68E-16 T 22-04-2016 LK04_RS17155 3413955c60d8d8bfea09f7922cd9068b 135 Gene3D G3DSA:1.10.1220.10 93 132 1.3E-5 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LK04_RS17155 3413955c60d8d8bfea09f7922cd9068b 135 SUPERFAMILY SSF47598 91 134 7.19E-5 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LK04_RS14735 1bff2610c086c49b61519c41c68d85de 127 SUPERFAMILY SSF54427 4 126 8.39E-41 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS14735 1bff2610c086c49b61519c41c68d85de 127 Pfam PF11533 Protein of unknown function (DUF3225) 5 126 6.6E-61 T 22-04-2016 IPR024507 Protein of unknown function DUF3225 LK04_RS14735 1bff2610c086c49b61519c41c68d85de 127 Gene3D G3DSA:3.10.450.50 5 127 5.4E-59 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS13600 4bf6bdbeac98215d95b4e4abfa263245 110 Pfam PF09850 Type VI secretion system protein DotU 13 110 2.3E-18 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU LK04_RS14580 726fe1a8cbe357dbe4e3d8dffca66c60 415 SUPERFAMILY SSF53474 46 414 1.59E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS14580 726fe1a8cbe357dbe4e3d8dffca66c60 415 Gene3D G3DSA:3.40.50.1820 346 412 5.5E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS14580 726fe1a8cbe357dbe4e3d8dffca66c60 415 Gene3D G3DSA:3.40.50.1820 158 301 5.5E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS14580 726fe1a8cbe357dbe4e3d8dffca66c60 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 58.806 T 22-04-2016 IPR010520 UPF0255 family LK04_RS14580 726fe1a8cbe357dbe4e3d8dffca66c60 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 413 2.1E-187 T 22-04-2016 IPR010520 UPF0255 family LK04_RS10535 674950448733ee53c78688459487a363 396 PANTHER PTHR23502:SF19 1 389 5.1E-107 T 22-04-2016 LK04_RS10535 674950448733ee53c78688459487a363 396 Pfam PF07690 Major Facilitator Superfamily 17 358 1.1E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS10535 674950448733ee53c78688459487a363 396 Gene3D G3DSA:1.20.1250.20 15 190 4.9E-29 T 22-04-2016 LK04_RS10535 674950448733ee53c78688459487a363 396 Gene3D G3DSA:1.20.1250.20 213 390 2.1E-7 T 22-04-2016 LK04_RS10535 674950448733ee53c78688459487a363 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 388 1.6E-91 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 LK04_RS10535 674950448733ee53c78688459487a363 396 PANTHER PTHR23502 1 389 5.1E-107 T 22-04-2016 LK04_RS10535 674950448733ee53c78688459487a363 396 SUPERFAMILY SSF103473 6 388 8.24E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05460 0ada0a0b71097b5d9d7a06f65899f98c 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 8 150 36.315 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 LK04_RS05460 0ada0a0b71097b5d9d7a06f65899f98c 150 Pfam PF04217 Protein of unknown function, DUF412 10 148 1.5E-60 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 LK04_RS08555 216316445b88030d7b52164eacea02d6 462 SUPERFAMILY SSF52467 289 462 1.23E-76 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS08555 216316445b88030d7b52164eacea02d6 462 Gene3D G3DSA:3.40.50.1220 287 462 1.7E-91 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LK04_RS08555 216316445b88030d7b52164eacea02d6 462 PANTHER PTHR10160 4 462 7.8E-255 T 22-04-2016 LK04_RS08555 216316445b88030d7b52164eacea02d6 462 PIRSF PIRSF000204 1 462 5.4E-236 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 LK04_RS08555 216316445b88030d7b52164eacea02d6 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 2.2E-199 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 LK04_RS19550 f23535055389bc9469a2b20d3d2fd45a 251 SUPERFAMILY SSF54197 33 249 4.25E-81 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LK04_RS19550 f23535055389bc9469a2b20d3d2fd45a 251 Gene3D G3DSA:3.30.428.30 30 250 1.8E-90 T 22-04-2016 LK04_RS19550 f23535055389bc9469a2b20d3d2fd45a 251 PIRSF PIRSF001273 5 251 4.4E-78 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 LK04_RS19550 f23535055389bc9469a2b20d3d2fd45a 251 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 33 249 7.7E-88 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 LK04_RS14140 7a4f8299cd0c04beb968ea4da8d27877 110 PANTHER PTHR33909:SF1 1 108 1.4E-36 T 22-04-2016 LK04_RS14140 7a4f8299cd0c04beb968ea4da8d27877 110 Pfam PF02699 Preprotein translocase subunit 23 99 1.0E-25 T 22-04-2016 IPR003849 Preprotein translocase YajC LK04_RS14140 7a4f8299cd0c04beb968ea4da8d27877 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 8.7E-17 T 22-04-2016 IPR003849 Preprotein translocase YajC LK04_RS14140 7a4f8299cd0c04beb968ea4da8d27877 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 8.7E-17 T 22-04-2016 IPR003849 Preprotein translocase YajC LK04_RS14140 7a4f8299cd0c04beb968ea4da8d27877 110 PANTHER PTHR33909 1 108 1.4E-36 T 22-04-2016 LK04_RS14140 7a4f8299cd0c04beb968ea4da8d27877 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 102 5.9E-33 T 22-04-2016 IPR003849 Preprotein translocase YajC LK04_RS14140 7a4f8299cd0c04beb968ea4da8d27877 110 SMART SM01323 19 102 1.2E-36 T 22-04-2016 IPR003849 Preprotein translocase YajC LK04_RS15795 03cd2d65d1183ba67d319cc8e3e56def 510 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 46 506 2.0E-210 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath LK04_RS15795 03cd2d65d1183ba67d319cc8e3e56def 510 PANTHER PTHR35565:SF1 1 40 0.0 T 22-04-2016 LK04_RS15795 03cd2d65d1183ba67d319cc8e3e56def 510 PANTHER PTHR35565:SF1 58 510 0.0 T 22-04-2016 LK04_RS15795 03cd2d65d1183ba67d319cc8e3e56def 510 PANTHER PTHR35565 1 40 0.0 T 22-04-2016 LK04_RS15795 03cd2d65d1183ba67d319cc8e3e56def 510 PANTHER PTHR35565 58 510 0.0 T 22-04-2016 LK04_RS15795 03cd2d65d1183ba67d319cc8e3e56def 510 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 85 506 1.4E-173 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 SUPERFAMILY SSF47384 194 271 1.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 Gene3D G3DSA:3.30.565.10 273 425 2.0E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 SUPERFAMILY SSF55874 261 423 8.91E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 422 2.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 SMART SM00388 211 271 5.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 3.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 Gene3D G3DSA:1.10.287.130 201 267 8.9E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 PANTHER PTHR24423:SF564 60 101 1.6E-125 T 22-04-2016 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 PANTHER PTHR24423:SF564 152 423 1.6E-125 T 22-04-2016 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 SMART SM00387 315 425 1.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 PANTHER PTHR24423 60 101 1.6E-125 T 22-04-2016 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 PANTHER PTHR24423 152 423 1.6E-125 T 22-04-2016 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 Pfam PF00672 HAMP domain 143 206 2.2E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS08525 ad9de875609ea82807a32f19be2006a4 436 SMART SM00304 158 210 3.0E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LK04_RS17735 83fc23fa4f567fa94b157f425ceb9bc6 222 PANTHER PTHR28511:SF1 3 220 2.0E-86 T 22-04-2016 LK04_RS17735 83fc23fa4f567fa94b157f425ceb9bc6 222 Hamap MF_00801 Endonuclease V [nfi]. 2 216 33.954 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 LK04_RS17735 83fc23fa4f567fa94b157f425ceb9bc6 222 Pfam PF04493 Endonuclease V 15 206 3.2E-74 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 LK04_RS17735 83fc23fa4f567fa94b157f425ceb9bc6 222 PANTHER PTHR28511 3 220 2.0E-86 T 22-04-2016 LK04_RS15760 f915852dab2e6cd7716b716d0be4d5e9 88 Pfam PF05488 PAAR motif 10 74 5.7E-7 T 22-04-2016 IPR008727 PAAR motif LK04_RS01425 72e8a4e927ba3fbacf5b2cfe9b619bc6 149 PANTHER PTHR21368 1 149 1.0E-51 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01425 72e8a4e927ba3fbacf5b2cfe9b619bc6 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 3.8E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal LK04_RS01425 72e8a4e927ba3fbacf5b2cfe9b619bc6 149 Gene3D G3DSA:3.40.5.10 1 52 2.5E-25 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal LK04_RS01425 72e8a4e927ba3fbacf5b2cfe9b619bc6 149 SUPERFAMILY SSF55658 1 57 4.01E-19 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal LK04_RS01425 72e8a4e927ba3fbacf5b2cfe9b619bc6 149 Gene3D G3DSA:3.10.430.100 61 149 8.3E-28 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal LK04_RS01425 72e8a4e927ba3fbacf5b2cfe9b619bc6 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal LK04_RS01425 72e8a4e927ba3fbacf5b2cfe9b619bc6 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 2.2E-58 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS01425 72e8a4e927ba3fbacf5b2cfe9b619bc6 149 SUPERFAMILY SSF55653 60 149 9.94E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal LK04_RS01425 72e8a4e927ba3fbacf5b2cfe9b619bc6 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 7.4E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal LK04_RS01425 72e8a4e927ba3fbacf5b2cfe9b619bc6 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.369 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 PANTHER PTHR21403 3 299 4.5E-132 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 SUPERFAMILY SSF54913 226 298 2.0E-20 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 Gene3D G3DSA:3.30.70.120 226 298 2.0E-29 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 1.3E-30 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.782 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 3.1E-56 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 2.0E-48 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 Pfam PF08029 HisG, C-terminal domain 223 296 2.3E-23 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 Gene3D G3DSA:3.40.190.10 3 139 1.3E-52 T 22-04-2016 LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 PANTHER PTHR21403:SF0 3 299 4.5E-132 T 22-04-2016 LK04_RS06230 355e40370f632073b8c8c5be2f7a45ba 299 SUPERFAMILY SSF53850 6 224 3.26E-70 T 22-04-2016 LK04_RS01915 b89a5a2d529f545df4f7fd68687aa40a 199 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.732 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LK04_RS01915 b89a5a2d529f545df4f7fd68687aa40a 199 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.4E-50 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LK04_RS01915 b89a5a2d529f545df4f7fd68687aa40a 199 PANTHER PTHR30309:SF0 1 199 5.2E-101 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LK04_RS01915 b89a5a2d529f545df4f7fd68687aa40a 199 SMART SM01207 10 185 1.1E-84 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LK04_RS01915 b89a5a2d529f545df4f7fd68687aa40a 199 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 194 2.2E-80 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LK04_RS01915 b89a5a2d529f545df4f7fd68687aa40a 199 PANTHER PTHR30309 1 199 5.2E-101 T 22-04-2016 LK04_RS10690 158cbbe97b72e6f0e5579d0ab23ef103 192 SUPERFAMILY SSF160930 5 160 4.84E-64 T 22-04-2016 LK04_RS10690 158cbbe97b72e6f0e5579d0ab23ef103 192 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 6.0E-82 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LK04_RS10690 158cbbe97b72e6f0e5579d0ab23ef103 192 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 192 2.0E-99 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LK04_RS10690 158cbbe97b72e6f0e5579d0ab23ef103 192 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 186 45.566 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LK04_RS10690 158cbbe97b72e6f0e5579d0ab23ef103 192 PIRSF PIRSF003159 1 181 6.2E-91 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 LK04_RS17730 37c424e8a87eb037b2d88be968a05864 196 Pfam PF04222 Protein of unknown function (DUF416) 6 192 5.3E-79 T 22-04-2016 IPR007338 Protein of unknown function DUF416 LK04_RS17730 37c424e8a87eb037b2d88be968a05864 196 Gene3D G3DSA:1.20.1590.10 1 192 1.1E-87 T 22-04-2016 IPR023381 YP001051499.1-like domain LK04_RS08120 edbca8f6ada86cba9ba06949eb280531 339 SUPERFAMILY SSF52540 50 317 1.44E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08120 edbca8f6ada86cba9ba06949eb280531 339 SMART SM00382 49 255 4.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08120 edbca8f6ada86cba9ba06949eb280531 339 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 249 332 9.0E-24 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS08120 edbca8f6ada86cba9ba06949eb280531 339 Pfam PF00005 ABC transporter 41 197 2.8E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS08120 edbca8f6ada86cba9ba06949eb280531 339 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 249 314 2.2E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LK04_RS08120 edbca8f6ada86cba9ba06949eb280531 339 PANTHER PTHR24220:SF535 22 332 3.4E-157 T 22-04-2016 LK04_RS08120 edbca8f6ada86cba9ba06949eb280531 339 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS08120 edbca8f6ada86cba9ba06949eb280531 339 PANTHER PTHR24220 22 332 3.4E-157 T 22-04-2016 LK04_RS08120 edbca8f6ada86cba9ba06949eb280531 339 Gene3D G3DSA:3.40.50.300 15 277 1.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10680 1bc32b9337a0d3f47e454095ddb45b6f 343 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 66 6.4E-20 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain LK04_RS10680 1bc32b9337a0d3f47e454095ddb45b6f 343 PANTHER PTHR30329 1 288 4.0E-130 T 22-04-2016 LK04_RS10680 1bc32b9337a0d3f47e454095ddb45b6f 343 Pfam PF00691 OmpA family 160 258 6.9E-13 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS10680 1bc32b9337a0d3f47e454095ddb45b6f 343 SUPERFAMILY SSF103088 156 264 1.29E-18 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS10680 1bc32b9337a0d3f47e454095ddb45b6f 343 PANTHER PTHR30329:SF2 1 288 4.0E-130 T 22-04-2016 LK04_RS10680 1bc32b9337a0d3f47e454095ddb45b6f 343 Gene3D G3DSA:3.30.1330.60 151 264 2.6E-16 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS16810 197680a85c354de4dd957ad66b4d942a 236 SUPERFAMILY SSF160467 25 111 1.83E-10 T 22-04-2016 LK04_RS16810 197680a85c354de4dd957ad66b4d942a 236 Gene3D G3DSA:3.30.1360.40 24 99 2.2E-8 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LK04_RS16810 197680a85c354de4dd957ad66b4d942a 236 SMART SM00796 23 221 9.2E-79 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D LK04_RS16810 197680a85c354de4dd957ad66b4d942a 236 PANTHER PTHR34698:SF1 18 236 1.8E-82 T 22-04-2016 LK04_RS16810 197680a85c354de4dd957ad66b4d942a 236 Gene3D G3DSA:2.40.100.10 107 231 2.4E-37 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS16810 197680a85c354de4dd957ad66b4d942a 236 SUPERFAMILY SSF50891 107 233 4.55E-34 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS16810 197680a85c354de4dd957ad66b4d942a 236 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 29 230 2.1E-47 T 22-04-2016 IPR010016 KipI family LK04_RS16810 197680a85c354de4dd957ad66b4d942a 236 Pfam PF02682 Allophanate hydrolase subunit 1 24 220 3.3E-56 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D LK04_RS16810 197680a85c354de4dd957ad66b4d942a 236 PANTHER PTHR34698 18 236 1.8E-82 T 22-04-2016 LK04_RS09945 59cb9ff27b9aaf732fa9a1fe24b07c6a 235 SMART SM00530 16 75 7.4E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS09945 59cb9ff27b9aaf732fa9a1fe24b07c6a 235 PANTHER PTHR33516:SF3 2 234 3.3E-45 T 22-04-2016 LK04_RS09945 59cb9ff27b9aaf732fa9a1fe24b07c6a 235 SUPERFAMILY SSF51306 135 230 3.31E-25 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LK04_RS09945 59cb9ff27b9aaf732fa9a1fe24b07c6a 235 SUPERFAMILY SSF47413 1 88 3.22E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS09945 59cb9ff27b9aaf732fa9a1fe24b07c6a 235 Gene3D G3DSA:2.10.109.10 135 230 1.6E-31 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LK04_RS09945 59cb9ff27b9aaf732fa9a1fe24b07c6a 235 Pfam PF01381 Helix-turn-helix 25 75 4.5E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS09945 59cb9ff27b9aaf732fa9a1fe24b07c6a 235 Pfam PF00717 Peptidase S24-like 142 215 6.8E-13 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B LK04_RS09945 59cb9ff27b9aaf732fa9a1fe24b07c6a 235 Gene3D G3DSA:1.10.260.40 5 83 5.1E-31 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS09945 59cb9ff27b9aaf732fa9a1fe24b07c6a 235 PANTHER PTHR33516 2 234 3.3E-45 T 22-04-2016 LK04_RS19225 39874deb25d75cf19a7b70f0beb20671 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 17 275 6.0E-97 T 22-04-2016 IPR017039 Virulence factor BrkB LK04_RS19225 39874deb25d75cf19a7b70f0beb20671 290 PANTHER PTHR30213 8 290 2.5E-109 T 22-04-2016 LK04_RS19225 39874deb25d75cf19a7b70f0beb20671 290 PIRSF PIRSF035875 3 290 5.8E-67 T 22-04-2016 IPR017039 Virulence factor BrkB LK04_RS19225 39874deb25d75cf19a7b70f0beb20671 290 Pfam PF03631 Virulence factor BrkB 27 274 5.5E-59 T 22-04-2016 IPR017039 Virulence factor BrkB LK04_RS19225 39874deb25d75cf19a7b70f0beb20671 290 PANTHER PTHR30213:SF0 8 290 2.5E-109 T 22-04-2016 LK04_RS19225 39874deb25d75cf19a7b70f0beb20671 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 7 281 23.806 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial LK04_RS10545 6c8b84e88518bb3ace87cc34207c46ea 286 SUPERFAMILY SSF82771 33 111 4.84E-9 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LK04_RS10545 6c8b84e88518bb3ace87cc34207c46ea 286 SMART SM00465 34 112 2.7E-12 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LK04_RS10545 6c8b84e88518bb3ace87cc34207c46ea 286 PANTHER PTHR30562 1 280 3.7E-149 T 22-04-2016 LK04_RS10545 6c8b84e88518bb3ace87cc34207c46ea 286 PANTHER PTHR30562:SF10 1 280 3.7E-149 T 22-04-2016 LK04_RS00975 463c3aa2b04ee177c2932d1642bb3b83 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 8.0E-10 T 22-04-2016 LK04_RS00975 463c3aa2b04ee177c2932d1642bb3b83 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.073 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00975 463c3aa2b04ee177c2932d1642bb3b83 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00975 463c3aa2b04ee177c2932d1642bb3b83 38 Pfam PF00444 Ribosomal protein L36 1 38 6.3E-21 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00975 463c3aa2b04ee177c2932d1642bb3b83 38 SUPERFAMILY SSF57840 1 38 3.66E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00975 463c3aa2b04ee177c2932d1642bb3b83 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 1.4E-22 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00975 463c3aa2b04ee177c2932d1642bb3b83 38 PANTHER PTHR18804 1 38 9.8E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS14515 0288a42f85b173d0f024f6c2086f9601 282 Gene3D G3DSA:3.90.850.10 67 275 1.3E-86 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LK04_RS14515 0288a42f85b173d0f024f6c2086f9601 282 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 274 7.8E-68 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LK04_RS14515 0288a42f85b173d0f024f6c2086f9601 282 SUPERFAMILY SSF56529 63 276 5.23E-81 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LK04_RS14515 0288a42f85b173d0f024f6c2086f9601 282 PANTHER PTHR11820 1 275 5.4E-170 T 22-04-2016 LK04_RS14515 0288a42f85b173d0f024f6c2086f9601 282 PANTHER PTHR11820:SF71 1 275 5.4E-170 T 22-04-2016 LK04_RS16315 e442e381b7fca3c9c243d275e1a6169e 188 PANTHER PTHR30352:SF2 1 156 4.5E-62 T 22-04-2016 LK04_RS16315 e442e381b7fca3c9c243d275e1a6169e 188 PIRSF PIRSF000368 1 167 3.0E-58 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- LK04_RS16315 e442e381b7fca3c9c243d275e1a6169e 188 ProSitePatterns PS01087 Radical activating enzymes signature. 15 36 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 LK04_RS16315 e442e381b7fca3c9c243d275e1a6169e 188 Gene3D G3DSA:3.20.20.70 25 129 1.1E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS16315 e442e381b7fca3c9c243d275e1a6169e 188 SUPERFAMILY SSF102114 25 106 5.3E-7 T 22-04-2016 LK04_RS16315 e442e381b7fca3c9c243d275e1a6169e 188 Pfam PF13353 4Fe-4S single cluster domain 13 151 4.4E-50 T 22-04-2016 LK04_RS16315 e442e381b7fca3c9c243d275e1a6169e 188 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 4 154 2.0E-59 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- LK04_RS16315 e442e381b7fca3c9c243d275e1a6169e 188 PANTHER PTHR30352 1 156 4.5E-62 T 22-04-2016 LK04_RS07920 eac8338b2b19dc311918740f504b3ebb 511 PANTHER PTHR30029:SF2 10 507 1.7E-242 T 22-04-2016 LK04_RS07920 eac8338b2b19dc311918740f504b3ebb 511 PANTHER PTHR30029 10 507 1.7E-242 T 22-04-2016 LK04_RS07920 eac8338b2b19dc311918740f504b3ebb 511 Pfam PF04293 SpoVR like protein 20 451 6.8E-177 T 22-04-2016 IPR007390 Sporulation stage V, protein R LK04_RS07970 c0b97327006e9789605b07c593971a22 282 SUPERFAMILY SSF51430 3 271 1.11E-77 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS07970 c0b97327006e9789605b07c593971a22 282 PANTHER PTHR11732 1 271 1.9E-111 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS07970 c0b97327006e9789605b07c593971a22 282 PANTHER PTHR11732:SF98 1 271 1.9E-111 T 22-04-2016 LK04_RS07970 c0b97327006e9789605b07c593971a22 282 Gene3D G3DSA:3.20.20.100 11 271 2.5E-77 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS07970 c0b97327006e9789605b07c593971a22 282 PRINTS PR00069 Aldo-keto reductase signature 125 142 8.7E-19 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS07970 c0b97327006e9789605b07c593971a22 282 PRINTS PR00069 Aldo-keto reductase signature 95 113 8.7E-19 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS07970 c0b97327006e9789605b07c593971a22 282 PRINTS PR00069 Aldo-keto reductase signature 204 228 8.7E-19 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS07970 c0b97327006e9789605b07c593971a22 282 PRINTS PR00069 Aldo-keto reductase signature 39 63 8.7E-19 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LK04_RS07970 c0b97327006e9789605b07c593971a22 282 Pfam PF00248 Aldo/keto reductase family 15 268 3.8E-58 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS13820 3603a524218ab58ce503cc81b71f0dad 126 PANTHER PTHR35813:SF1 1 125 2.3E-47 T 22-04-2016 LK04_RS13820 3603a524218ab58ce503cc81b71f0dad 126 PIRSF PIRSF016789 2 123 3.9E-47 T 22-04-2016 IPR007401 Protein of unknown function DUF454 LK04_RS13820 3603a524218ab58ce503cc81b71f0dad 126 PANTHER PTHR35813 1 125 2.3E-47 T 22-04-2016 LK04_RS13820 3603a524218ab58ce503cc81b71f0dad 126 Pfam PF04304 Protein of unknown function (DUF454) 3 116 8.7E-42 T 22-04-2016 IPR007401 Protein of unknown function DUF454 LK04_RS08895 3ea0a88fad695c5162e76034437b9c54 190 Gene3D G3DSA:3.40.50.10490 8 182 6.6E-30 T 22-04-2016 LK04_RS08895 3ea0a88fad695c5162e76034437b9c54 190 Pfam PF01380 SIS domain 33 130 4.4E-7 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS08895 3ea0a88fad695c5162e76034437b9c54 190 PANTHER PTHR10937:SF14 8 130 6.7E-18 T 22-04-2016 LK04_RS08895 3ea0a88fad695c5162e76034437b9c54 190 SUPERFAMILY SSF53697 8 182 6.45E-25 T 22-04-2016 LK04_RS08895 3ea0a88fad695c5162e76034437b9c54 190 PANTHER PTHR10937 8 130 6.7E-18 T 22-04-2016 LK04_RS16185 6bc63730564c9192426f1ad441efec8f 171 Pfam PF10696 Protein of unknown function (DUF2501) 91 167 1.1E-25 T 22-04-2016 IPR019637 Protein of unknown function DUF2501 LK04_RS03980 7a8f28ac95b4c6be1a22d2796a2f848d 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.3E-71 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA LK04_RS03980 7a8f28ac95b4c6be1a22d2796a2f848d 127 Gene3D G3DSA:3.20.70.20 64 126 3.8E-33 T 22-04-2016 LK04_RS03980 7a8f28ac95b4c6be1a22d2796a2f848d 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 41.504 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA LK04_RS03980 7a8f28ac95b4c6be1a22d2796a2f848d 127 Pfam PF01228 Glycine radical 15 108 2.1E-24 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 LK04_RS03980 7a8f28ac95b4c6be1a22d2796a2f848d 127 PIRSF PIRSF000378 2 127 1.6E-54 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA LK04_RS03980 7a8f28ac95b4c6be1a22d2796a2f848d 127 PANTHER PTHR30191:SF5 1 127 3.2E-97 T 22-04-2016 LK04_RS03980 7a8f28ac95b4c6be1a22d2796a2f848d 127 SUPERFAMILY SSF51998 65 126 9.61E-24 T 22-04-2016 LK04_RS03980 7a8f28ac95b4c6be1a22d2796a2f848d 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LK04_RS03980 7a8f28ac95b4c6be1a22d2796a2f848d 127 PANTHER PTHR30191 1 127 3.2E-97 T 22-04-2016 LK04_RS04210 ef189c2048088600fc481b41faf9b061 205 PANTHER PTHR38035 2 205 7.7E-74 T 22-04-2016 LK04_RS04210 ef189c2048088600fc481b41faf9b061 205 Gene3D G3DSA:1.25.40.10 72 184 2.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS04210 ef189c2048088600fc481b41faf9b061 205 PIRSF PIRSF006170 1 205 2.9E-57 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 LK04_RS04210 ef189c2048088600fc481b41faf9b061 205 SUPERFAMILY SSF48452 88 186 5.18E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS04210 ef189c2048088600fc481b41faf9b061 205 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 4.0E-54 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain LK04_RS19590 c0c4e48c48687763d5aec727f8530fc0 79 Pfam PF06005 Protein of unknown function (DUF904) 1 78 3.4E-28 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 LK04_RS19590 c0c4e48c48687763d5aec727f8530fc0 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.361 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 LK04_RS07360 6058bee0cecc434d718fb5876b0c56f0 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 37.997 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 LK04_RS07360 6058bee0cecc434d718fb5876b0c56f0 250 PANTHER PTHR12598:SF0 1 250 1.1E-100 T 22-04-2016 LK04_RS07360 6058bee0cecc434d718fb5876b0c56f0 250 Pfam PF03932 CutC family 3 199 9.3E-74 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 LK04_RS07360 6058bee0cecc434d718fb5876b0c56f0 250 Gene3D G3DSA:3.20.20.380 1 243 3.5E-91 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 LK04_RS07360 6058bee0cecc434d718fb5876b0c56f0 250 PANTHER PTHR12598 1 250 1.1E-100 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 LK04_RS07360 6058bee0cecc434d718fb5876b0c56f0 250 SUPERFAMILY SSF110395 3 243 1.09E-74 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 LK04_RS13110 55114c357905ab69d4be1222a664cb1d 115 PIRSF PIRSF000169 1 115 3.9E-41 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 LK04_RS13110 55114c357905ab69d4be1222a664cb1d 115 PANTHER PTHR38689:SF1 2 115 1.6E-56 T 22-04-2016 LK04_RS13110 55114c357905ab69d4be1222a664cb1d 115 SUPERFAMILY SSF81343 5 115 3.49E-28 T 22-04-2016 LK04_RS13110 55114c357905ab69d4be1222a664cb1d 115 Gene3D G3DSA:1.20.1300.10 1 115 1.3E-39 T 22-04-2016 LK04_RS13110 55114c357905ab69d4be1222a664cb1d 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 1.4E-35 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 LK04_RS13110 55114c357905ab69d4be1222a664cb1d 115 PANTHER PTHR38689 2 115 1.6E-56 T 22-04-2016 LK04_RS16585 89d67229a0712ce1758e1070110e78c7 180 Pfam PF02470 MlaD protein 40 116 1.6E-19 T 22-04-2016 IPR003399 Mce/MlaD LK04_RS16585 89d67229a0712ce1758e1070110e78c7 180 PANTHER PTHR33371 1 153 1.2E-43 T 22-04-2016 LK04_RS16585 89d67229a0712ce1758e1070110e78c7 180 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 153 2.6E-52 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 LK04_RS13765 cb2cfd2babedacd2a42845fc2fe3b269 562 PANTHER PTHR16254:SF17 1 551 0.0 T 22-04-2016 LK04_RS13765 cb2cfd2babedacd2a42845fc2fe3b269 562 Gene3D G3DSA:3.40.50.720 414 547 4.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13765 cb2cfd2babedacd2a42845fc2fe3b269 562 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 1.5E-79 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LK04_RS13765 cb2cfd2babedacd2a42845fc2fe3b269 562 PANTHER PTHR16254 1 551 0.0 T 22-04-2016 LK04_RS13765 cb2cfd2babedacd2a42845fc2fe3b269 562 SUPERFAMILY SSF51735 418 547 3.6E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS13765 cb2cfd2babedacd2a42845fc2fe3b269 562 Pfam PF02254 TrkA-N domain 421 534 5.2E-23 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LK04_RS13765 cb2cfd2babedacd2a42845fc2fe3b269 562 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 3.3E-76 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 LK04_RS17875 5a27cd623b6edd90c93abf03d94d9c49 178 PANTHER PTHR38030 1 178 4.3E-97 T 22-04-2016 LK04_RS17875 5a27cd623b6edd90c93abf03d94d9c49 178 SUPERFAMILY SSF52218 1 171 1.35E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS17875 5a27cd623b6edd90c93abf03d94d9c49 178 PANTHER PTHR38030:SF2 1 178 4.3E-97 T 22-04-2016 LK04_RS17875 5a27cd623b6edd90c93abf03d94d9c49 178 Pfam PF12724 Flavodoxin domain 4 151 1.3E-54 T 22-04-2016 IPR026816 Flavodoxin domain LK04_RS17875 5a27cd623b6edd90c93abf03d94d9c49 178 Gene3D G3DSA:3.40.50.360 2 72 2.4E-24 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS17875 5a27cd623b6edd90c93abf03d94d9c49 178 Gene3D G3DSA:3.40.50.360 104 174 2.4E-24 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS01045 1db121051862d6a79cb7bae34333e3c0 374 Pfam PF02481 DNA recombination-mediator protein A 71 274 3.3E-76 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 LK04_RS01045 1db121051862d6a79cb7bae34333e3c0 374 PANTHER PTHR32039:SF8 58 369 3.2E-120 T 22-04-2016 LK04_RS01045 1db121051862d6a79cb7bae34333e3c0 374 PANTHER PTHR32039 58 369 3.2E-120 T 22-04-2016 LK04_RS01045 1db121051862d6a79cb7bae34333e3c0 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 283 1.3E-79 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 LK04_RS01045 1db121051862d6a79cb7bae34333e3c0 374 SUPERFAMILY SSF102405 78 283 4.58E-39 T 22-04-2016 LK04_RS01045 1db121051862d6a79cb7bae34333e3c0 374 Gene3D G3DSA:3.40.50.450 110 253 5.4E-10 T 22-04-2016 LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 SMART SM00267 215 387 3.0E-19 T 22-04-2016 IPR000160 GGDEF domain LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 382 1.7E-21 T 22-04-2016 IPR000160 GGDEF domain LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 SUPERFAMILY SSF55073 232 386 1.41E-19 T 22-04-2016 IPR029787 Nucleotide cyclase LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 Pfam PF00563 EAL domain 406 631 3.4E-40 T 22-04-2016 IPR001633 EAL domain LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 Gene3D G3DSA:3.20.20.450 400 637 7.5E-38 T 22-04-2016 IPR001633 EAL domain LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 33 130 4.2E-29 T 22-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 SUPERFAMILY SSF141868 405 642 2.09E-38 T 22-04-2016 IPR001633 EAL domain LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 Gene3D G3DSA:3.30.70.270 229 386 7.8E-20 T 22-04-2016 LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 PANTHER PTHR33121:SF15 512 630 3.0E-15 T 22-04-2016 LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 PANTHER PTHR33121 512 630 3.0E-15 T 22-04-2016 LK04_RS01180 365bb4ce08cfecdb0ce311ddc985c6ca 648 SMART SM00052 397 637 1.8E-34 T 22-04-2016 IPR001633 EAL domain LK04_RS06260 f4ed19d2e1ce49c5d1fde66e32ba16e4 425 PANTHER PTHR13847 5 422 2.0E-210 T 22-04-2016 LK04_RS06260 f4ed19d2e1ce49c5d1fde66e32ba16e4 425 SUPERFAMILY SSF51905 26 251 3.02E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06260 f4ed19d2e1ce49c5d1fde66e32ba16e4 425 SUPERFAMILY SSF51905 354 412 3.02E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06260 f4ed19d2e1ce49c5d1fde66e32ba16e4 425 Pfam PF01266 FAD dependent oxidoreductase 28 379 4.3E-51 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LK04_RS06260 f4ed19d2e1ce49c5d1fde66e32ba16e4 425 Gene3D G3DSA:3.50.50.60 170 250 4.2E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06260 f4ed19d2e1ce49c5d1fde66e32ba16e4 425 Gene3D G3DSA:3.50.50.60 343 392 4.2E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06260 f4ed19d2e1ce49c5d1fde66e32ba16e4 425 Gene3D G3DSA:3.50.50.60 13 117 4.2E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS06260 f4ed19d2e1ce49c5d1fde66e32ba16e4 425 PANTHER PTHR13847:SF210 5 422 2.0E-210 T 22-04-2016 LK04_RS06260 f4ed19d2e1ce49c5d1fde66e32ba16e4 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 28 50 2.9E-5 T 22-04-2016 LK04_RS06260 f4ed19d2e1ce49c5d1fde66e32ba16e4 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 369 2.9E-5 T 22-04-2016 LK04_RS03135 1a53091900cb64fe6b6277d7e2ecdf88 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 272 1.9E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LK04_RS03135 1a53091900cb64fe6b6277d7e2ecdf88 378 SUPERFAMILY SSF111369 44 279 1.7E-85 T 22-04-2016 LK04_RS03135 1a53091900cb64fe6b6277d7e2ecdf88 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 353 7.2E-77 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS03135 1a53091900cb64fe6b6277d7e2ecdf88 378 PANTHER PTHR30158 1 375 8.7E-134 T 22-04-2016 LK04_RS03135 1a53091900cb64fe6b6277d7e2ecdf88 378 PANTHER PTHR30158:SF3 1 375 8.7E-134 T 22-04-2016 LK04_RS03135 1a53091900cb64fe6b6277d7e2ecdf88 378 Gene3D G3DSA:2.40.50.100 151 186 1.0E-23 T 22-04-2016 LK04_RS03135 1a53091900cb64fe6b6277d7e2ecdf88 378 Gene3D G3DSA:2.40.50.100 57 90 1.0E-23 T 22-04-2016 LK04_RS18880 57632a71f92e31f547a3c11e78a96c94 412 Gene3D G3DSA:3.40.640.10 62 266 9.4E-38 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS18880 57632a71f92e31f547a3c11e78a96c94 412 Pfam PF00155 Aminotransferase class I and II 166 403 6.3E-21 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS18880 57632a71f92e31f547a3c11e78a96c94 412 PANTHER PTHR11751:SF419 11 411 1.6E-170 T 22-04-2016 LK04_RS18880 57632a71f92e31f547a3c11e78a96c94 412 Gene3D G3DSA:3.90.1150.10 267 409 2.5E-16 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS18880 57632a71f92e31f547a3c11e78a96c94 412 PANTHER PTHR11751 11 411 1.6E-170 T 22-04-2016 LK04_RS18880 57632a71f92e31f547a3c11e78a96c94 412 SUPERFAMILY SSF53383 24 411 3.4E-58 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS04365 bf0559ce6cf83f6de431ff4e8b178804 202 Gene3D G3DSA:3.40.1260.10 74 199 2.5E-9 T 22-04-2016 IPR027396 DsrEFH-like LK04_RS04365 bf0559ce6cf83f6de431ff4e8b178804 202 Pfam PF02635 DsrE/DsrF-like family 85 200 2.1E-9 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein LK04_RS04365 bf0559ce6cf83f6de431ff4e8b178804 202 SUPERFAMILY SSF75169 76 200 9.65E-12 T 22-04-2016 IPR027396 DsrEFH-like LK04_RS15820 540b04415935427e86f6b65c5f4394d6 229 SUPERFAMILY SSF75217 3 156 3.92E-33 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LK04_RS15820 540b04415935427e86f6b65c5f4394d6 229 PANTHER PTHR12029:SF54 5 180 5.3E-76 T 22-04-2016 LK04_RS15820 540b04415935427e86f6b65c5f4394d6 229 PIRSF PIRSF004808 1 229 5.9E-65 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LK04_RS15820 540b04415935427e86f6b65c5f4394d6 229 PANTHER PTHR12029 5 180 5.3E-76 T 22-04-2016 LK04_RS15820 540b04415935427e86f6b65c5f4394d6 229 Gene3D G3DSA:3.40.1280.10 3 156 5.6E-32 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LK04_RS15820 540b04415935427e86f6b65c5f4394d6 229 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 5 225 3.0E-70 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LK04_RS15820 540b04415935427e86f6b65c5f4394d6 229 Pfam PF00588 SpoU rRNA Methylase family 5 153 2.0E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LK04_RS08815 63b73faeca9d79d7c7891497f91030a2 416 Pfam PF01569 PAP2 superfamily 180 281 3.3E-13 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS08815 63b73faeca9d79d7c7891497f91030a2 416 SMART SM00014 170 289 9.4E-6 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS08815 63b73faeca9d79d7c7891497f91030a2 416 SUPERFAMILY SSF48317 173 307 6.41E-29 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS08815 63b73faeca9d79d7c7891497f91030a2 416 Gene3D G3DSA:1.20.144.10 93 310 3.3E-47 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LK04_RS07515 7b7fdd497367d11a4133854034db177a 354 PANTHER PTHR30349 99 331 3.6E-37 T 22-04-2016 LK04_RS07515 7b7fdd497367d11a4133854034db177a 354 Gene3D G3DSA:1.10.443.10 173 331 3.2E-39 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LK04_RS07515 7b7fdd497367d11a4133854034db177a 354 SUPERFAMILY SSF56349 61 330 7.36E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LK04_RS07515 7b7fdd497367d11a4133854034db177a 354 PANTHER PTHR30349:SF20 99 331 3.6E-37 T 22-04-2016 LK04_RS07515 7b7fdd497367d11a4133854034db177a 354 Pfam PF00589 Phage integrase family 177 322 2.1E-20 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LK04_RS01390 2b2c77a869b80484bbe43ef02178dbd2 108 SUPERFAMILY SSF159871 4 97 1.7E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS01390 2b2c77a869b80484bbe43ef02178dbd2 108 Pfam PF07338 Protein of unknown function (DUF1471) 43 97 6.2E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS01390 2b2c77a869b80484bbe43ef02178dbd2 108 Gene3D G3DSA:3.30.1660.10 30 97 1.3E-16 T 22-04-2016 IPR025543 Dodecin-like LK04_RS10105 8d8b0d2811ce61e2e9ae338da0f1d403 71 Gene3D G3DSA:1.20.1280.40 1 70 7.2E-31 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA LK04_RS10105 8d8b0d2811ce61e2e9ae338da0f1d403 71 SUPERFAMILY SSF68989 1 70 3.92E-21 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA LK04_RS10105 8d8b0d2811ce61e2e9ae338da0f1d403 71 Pfam PF05321 Haemolysin expression modulating protein 8 68 1.4E-26 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA LK04_RS13595 0aa31288776d9ab1072dc66e2b466205 73 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 13 65 1.6E-8 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN LK04_RS05195 736f611d286afb31874d797525400d3c 246 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 226 3.6E-84 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05195 736f611d286afb31874d797525400d3c 246 PANTHER PTHR30071 1 222 1.3E-86 T 22-04-2016 LK04_RS05195 736f611d286afb31874d797525400d3c 246 Pfam PF01578 Cytochrome C assembly protein 30 184 2.6E-32 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LK04_RS05195 736f611d286afb31874d797525400d3c 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.4E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05195 736f611d286afb31874d797525400d3c 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.4E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05195 736f611d286afb31874d797525400d3c 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.4E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05195 736f611d286afb31874d797525400d3c 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.4E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05195 736f611d286afb31874d797525400d3c 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 202 226 1.4E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05195 736f611d286afb31874d797525400d3c 246 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.4E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS09065 cc42192acd5c92d28688aa4482683519 301 PANTHER PTHR16509 37 294 2.1E-31 T 22-04-2016 LK04_RS09065 cc42192acd5c92d28688aa4482683519 301 PANTHER PTHR16509:SF1 37 294 2.1E-31 T 22-04-2016 LK04_RS09065 cc42192acd5c92d28688aa4482683519 301 SUPERFAMILY SSF56300 35 294 2.63E-51 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS09065 cc42192acd5c92d28688aa4482683519 301 Pfam PF00149 Calcineurin-like phosphoesterase 36 253 2.1E-17 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LK04_RS09065 cc42192acd5c92d28688aa4482683519 301 Gene3D G3DSA:3.60.21.10 34 294 2.9E-59 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LK04_RS16910 57f3182654f9d7a7073e3429e144dfc5 308 PANTHER PTHR22916 1 257 5.6E-27 T 22-04-2016 LK04_RS16910 57f3182654f9d7a7073e3429e144dfc5 308 SUPERFAMILY SSF53448 7 232 9.38E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS16910 57f3182654f9d7a7073e3429e144dfc5 308 Gene3D G3DSA:3.90.550.10 7 245 1.1E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS16910 57f3182654f9d7a7073e3429e144dfc5 308 Pfam PF00535 Glycosyl transferase family 2 8 175 8.2E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS05315 d991cef950f8ff00d167cfabbdf8adf2 393 Gene3D G3DSA:1.20.1250.20 16 192 1.7E-14 T 22-04-2016 LK04_RS05315 d991cef950f8ff00d167cfabbdf8adf2 393 Gene3D G3DSA:1.20.1250.20 215 389 5.0E-20 T 22-04-2016 LK04_RS05315 d991cef950f8ff00d167cfabbdf8adf2 393 Pfam PF07690 Major Facilitator Superfamily 18 200 1.8E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS05315 d991cef950f8ff00d167cfabbdf8adf2 393 Pfam PF07690 Major Facilitator Superfamily 221 388 3.8E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS05315 d991cef950f8ff00d167cfabbdf8adf2 393 PANTHER PTHR23517 18 383 4.4E-182 T 22-04-2016 LK04_RS05315 d991cef950f8ff00d167cfabbdf8adf2 393 SUPERFAMILY SSF103473 15 388 1.24E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05315 d991cef950f8ff00d167cfabbdf8adf2 393 PANTHER PTHR23517:SF1 18 383 4.4E-182 T 22-04-2016 LK04_RS17915 0b7c3a3ea96e96252827d05276ed1a07 243 PANTHER PTHR20842 1 222 1.8E-50 T 22-04-2016 LK04_RS17915 0b7c3a3ea96e96252827d05276ed1a07 243 Gene3D G3DSA:3.40.50.880 1 224 3.1E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS17915 0b7c3a3ea96e96252827d05276ed1a07 243 Pfam PF03575 Peptidase family S51 3 205 6.6E-44 T 22-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 LK04_RS17915 0b7c3a3ea96e96252827d05276ed1a07 243 SUPERFAMILY SSF52317 1 207 4.3E-32 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LK04_RS01820 f9d8b5fe4ca0e63511d7bec93c1f7e2b 560 Pfam PF15611 EH_Signature domain 40 418 1.5E-39 T 22-04-2016 IPR028943 EH signature domain LK04_RS15705 3da232d2e1b52be43d49dc5f3af78172 288 PANTHER PTHR23150:SF19 19 248 1.2E-29 T 22-04-2016 LK04_RS15705 3da232d2e1b52be43d49dc5f3af78172 288 Pfam PF03781 Sulfatase-modifying factor enzyme 1 36 253 8.8E-40 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme LK04_RS15705 3da232d2e1b52be43d49dc5f3af78172 288 SUPERFAMILY SSF56436 37 267 1.07E-48 T 22-04-2016 IPR016187 C-type lectin fold LK04_RS15705 3da232d2e1b52be43d49dc5f3af78172 288 PANTHER PTHR23150 19 248 1.2E-29 T 22-04-2016 LK04_RS15705 3da232d2e1b52be43d49dc5f3af78172 288 Gene3D G3DSA:3.90.1580.10 32 268 2.4E-49 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme LK04_RS07965 51876b63059527d2fa85c188e7164fea 249 PANTHER PTHR38776 18 249 3.7E-72 T 22-04-2016 LK04_RS07965 51876b63059527d2fa85c188e7164fea 249 Pfam PF06629 MltA-interacting protein MipA 29 249 4.6E-58 T 22-04-2016 IPR010583 MltA-interacting MipA LK04_RS07965 51876b63059527d2fa85c188e7164fea 249 SUPERFAMILY SSF56935 27 95 2.01E-5 T 22-04-2016 LK04_RS07965 51876b63059527d2fa85c188e7164fea 249 SUPERFAMILY SSF56935 124 231 2.01E-5 T 22-04-2016 LK04_RS07965 51876b63059527d2fa85c188e7164fea 249 Gene3D G3DSA:2.40.170.20 29 98 5.9E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS07965 51876b63059527d2fa85c188e7164fea 249 Gene3D G3DSA:2.40.170.20 135 247 5.9E-5 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS12780 122836d8a3a9584c022b1e30d8de11d5 405 PANTHER PTHR23517 15 395 5.6E-110 T 22-04-2016 LK04_RS12780 122836d8a3a9584c022b1e30d8de11d5 405 SUPERFAMILY SSF103473 17 393 2.22E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS12780 122836d8a3a9584c022b1e30d8de11d5 405 PANTHER PTHR23517:SF4 15 395 5.6E-110 T 22-04-2016 LK04_RS12780 122836d8a3a9584c022b1e30d8de11d5 405 Pfam PF07690 Major Facilitator Superfamily 227 391 3.2E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS12780 122836d8a3a9584c022b1e30d8de11d5 405 Gene3D G3DSA:1.20.1250.20 220 397 1.4E-21 T 22-04-2016 LK04_RS12780 122836d8a3a9584c022b1e30d8de11d5 405 Gene3D G3DSA:1.20.1250.20 17 197 3.3E-21 T 22-04-2016 LK04_RS14215 a2e05bb6b643091f05f4ee565fc671b7 139 Gene3D G3DSA:3.30.1150.10 39 125 6.0E-16 T 22-04-2016 LK04_RS14215 a2e05bb6b643091f05f4ee565fc671b7 139 SUPERFAMILY SSF74653 45 119 1.77E-7 T 22-04-2016 LK04_RS14215 a2e05bb6b643091f05f4ee565fc671b7 139 Pfam PF06519 TolA C-terminal 42 114 1.4E-7 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 LK04_RS13690 aeeeb61eb466e508bf202ec0cd185c3e 805 Pfam PF02687 FtsX-like permease family 683 794 1.5E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LK04_RS13690 aeeeb61eb466e508bf202ec0cd185c3e 805 Pfam PF02687 FtsX-like permease family 247 363 3.3E-9 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LK04_RS13690 aeeeb61eb466e508bf202ec0cd185c3e 805 PANTHER PTHR30287 1 793 4.8E-163 T 22-04-2016 LK04_RS15830 870136603ef4c7387774c4f0690f4b00 157 Pfam PF05981 CreA protein 25 156 1.5E-57 T 22-04-2016 IPR010292 Uncharacterised protein family CreA LK04_RS15830 870136603ef4c7387774c4f0690f4b00 157 PANTHER PTHR37952 7 157 4.5E-84 T 22-04-2016 LK04_RS15830 870136603ef4c7387774c4f0690f4b00 157 PANTHER PTHR37952:SF2 7 157 4.5E-84 T 22-04-2016 LK04_RS15830 870136603ef4c7387774c4f0690f4b00 157 PIRSF PIRSF003174 1 157 3.5E-68 T 22-04-2016 IPR010292 Uncharacterised protein family CreA LK04_RS15320 6a4b59073e5b22d5e416254238e24211 299 PANTHER PTHR32179 1 297 2.7E-129 T 22-04-2016 LK04_RS15320 6a4b59073e5b22d5e416254238e24211 299 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 128 5.5E-26 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 LK04_RS15320 6a4b59073e5b22d5e416254238e24211 299 Gene3D G3DSA:3.20.20.70 151 284 2.1E-57 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS15320 6a4b59073e5b22d5e416254238e24211 299 SUPERFAMILY SSF51690 130 295 1.18E-55 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 LK04_RS15320 6a4b59073e5b22d5e416254238e24211 299 PIRSF PIRSF006250 17 298 2.1E-104 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD LK04_RS15320 6a4b59073e5b22d5e416254238e24211 299 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 294 1.0E-57 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 LK04_RS15320 6a4b59073e5b22d5e416254238e24211 299 SUPERFAMILY SSF54675 14 129 6.83E-33 T 22-04-2016 LK04_RS15320 6a4b59073e5b22d5e416254238e24211 299 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 295 1.6E-97 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 LK04_RS15320 6a4b59073e5b22d5e416254238e24211 299 Gene3D G3DSA:3.90.1170.20 19 150 3.0E-49 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 LK04_RS08950 e4378563ec4d6221a2b29350651750e0 217 SUPERFAMILY SSF141318 53 217 4.45E-45 T 22-04-2016 LK04_RS08950 e4378563ec4d6221a2b29350651750e0 217 PIRSF PIRSF033535 6 217 1.9E-50 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein LK04_RS08950 e4378563ec4d6221a2b29350651750e0 217 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 25 215 1.9E-55 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 SUPERFAMILY SSF52374 3 155 7.24E-45 T 22-04-2016 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 Pfam PF01467 Cytidylyltransferase-like 6 134 4.4E-21 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 Gene3D G3DSA:3.40.50.620 2 157 2.6E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 64 1.5E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 6.4E-54 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 6.4E-54 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 6.4E-54 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 6.4E-54 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 6.4E-54 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 PANTHER PTHR21342:SF1 1 161 4.5E-85 T 22-04-2016 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 1.0E-4 T 22-04-2016 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 PANTHER PTHR21342 1 161 4.5E-85 T 22-04-2016 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.527 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LK04_RS19400 2b5b75a0ace2be724f75f66c4fef88d9 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 156 6.7E-61 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LK04_RS12325 40bea33fd78b8c882e98fec2d0a6e29d 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 2.1E-25 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 LK04_RS12325 40bea33fd78b8c882e98fec2d0a6e29d 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 4.7E-49 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial LK04_RS12325 40bea33fd78b8c882e98fec2d0a6e29d 218 PANTHER PTHR10000:SF10 1 218 4.1E-67 T 22-04-2016 LK04_RS12325 40bea33fd78b8c882e98fec2d0a6e29d 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 9.8E-37 T 22-04-2016 LK04_RS12325 40bea33fd78b8c882e98fec2d0a6e29d 218 Gene3D G3DSA:1.20.1440.100 16 79 7.9E-18 T 22-04-2016 LK04_RS12325 40bea33fd78b8c882e98fec2d0a6e29d 218 SUPERFAMILY SSF56784 1 211 2.38E-28 T 22-04-2016 IPR023214 HAD-like domain LK04_RS12325 40bea33fd78b8c882e98fec2d0a6e29d 218 PANTHER PTHR10000 1 218 4.1E-67 T 22-04-2016 LK04_RS12325 40bea33fd78b8c882e98fec2d0a6e29d 218 Gene3D G3DSA:3.40.50.1000 80 216 5.6E-45 T 22-04-2016 IPR023214 HAD-like domain LK04_RS12430 e609df0dea963931907383f329734935 152 Gene3D G3DSA:1.10.10.10 36 103 3.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12430 e609df0dea963931907383f329734935 152 SUPERFAMILY SSF46785 41 149 2.01E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12430 e609df0dea963931907383f329734935 152 Gene3D G3DSA:1.10.60.10 108 150 2.3E-17 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 LK04_RS12430 e609df0dea963931907383f329734935 152 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 92 2.4E-11 T 22-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 LK04_RS12430 e609df0dea963931907383f329734935 152 PANTHER PTHR33238 35 150 3.2E-22 T 22-04-2016 LK04_RS12430 e609df0dea963931907383f329734935 152 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 148 1.1E-11 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 LK04_RS12430 e609df0dea963931907383f329734935 152 SMART SM00529 56 152 4.2E-35 T 22-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 LK04_RS12430 e609df0dea963931907383f329734935 152 PANTHER PTHR33238:SF1 35 150 3.2E-22 T 22-04-2016 LK04_RS13510 ca10205f1e5f5dc12a015ab5f7fb7d6c 367 PANTHER PTHR21716:SF13 11 356 5.8E-79 T 22-04-2016 LK04_RS13510 ca10205f1e5f5dc12a015ab5f7fb7d6c 367 Pfam PF01594 Domain of unknown function DUF20 10 339 1.4E-53 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LK04_RS13510 ca10205f1e5f5dc12a015ab5f7fb7d6c 367 PANTHER PTHR21716 11 356 5.8E-79 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 SUPERFAMILY SSF52096 5 318 4.44E-105 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 1 319 1.7E-170 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.8E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.8E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.8E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.8E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.8E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.8E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 Gene3D G3DSA:3.90.226.10 58 276 4.5E-50 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 PANTHER PTHR22855 1 317 9.4E-136 T 22-04-2016 LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 1.0E-62 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS14905 582aca580476ab0683d856391d4c8abb 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 51.004 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LK04_RS16230 39c4afa1bffd9824d883a0d8a510388c 523 Gene3D G3DSA:3.40.190.10 148 291 3.3E-26 T 22-04-2016 LK04_RS16230 39c4afa1bffd9824d883a0d8a510388c 523 Gene3D G3DSA:3.10.105.10 292 492 4.0E-39 T 22-04-2016 LK04_RS16230 39c4afa1bffd9824d883a0d8a510388c 523 Gene3D G3DSA:3.90.76.10 58 147 9.6E-13 T 22-04-2016 LK04_RS16230 39c4afa1bffd9824d883a0d8a510388c 523 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 437 8.3E-64 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LK04_RS16230 39c4afa1bffd9824d883a0d8a510388c 523 SUPERFAMILY SSF53850 20 509 7.06E-95 T 22-04-2016 LK04_RS16230 39c4afa1bffd9824d883a0d8a510388c 523 PANTHER PTHR30290 1 503 8.5E-85 T 22-04-2016 LK04_RS16230 39c4afa1bffd9824d883a0d8a510388c 523 PIRSF PIRSF002741 16 519 7.5E-58 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LK04_RS00680 1e07f0299266356774fb23a0e72ed3a5 108 SUPERFAMILY SSF50022 1 107 7.29E-35 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LK04_RS00680 1e07f0299266356774fb23a0e72ed3a5 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 106 4.2E-36 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 LK04_RS00680 1e07f0299266356774fb23a0e72ed3a5 108 Gene3D G3DSA:2.102.10.10 2 107 1.9E-40 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LK04_RS00680 1e07f0299266356774fb23a0e72ed3a5 108 PANTHER PTHR40562 1 106 3.0E-55 T 22-04-2016 LK04_RS00680 1e07f0299266356774fb23a0e72ed3a5 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 2.8E-39 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 LK04_RS08585 6380b18e71470fd537e4ffc99a1038cf 445 PANTHER PTHR39479:SF2 1 445 1.3E-257 T 22-04-2016 LK04_RS08585 6380b18e71470fd537e4ffc99a1038cf 445 Pfam PF07063 Domain of unknown function (DUF1338) 10 399 7.6E-119 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 LK04_RS08585 6380b18e71470fd537e4ffc99a1038cf 445 SMART SM01150 11 399 1.2E-219 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 LK04_RS08585 6380b18e71470fd537e4ffc99a1038cf 445 PANTHER PTHR39479 1 445 1.3E-257 T 22-04-2016 LK04_RS10415 b05818aa3883c10779b9fad0c23d74f6 247 SUPERFAMILY SSF141868 11 223 4.45E-13 T 22-04-2016 IPR001633 EAL domain LK04_RS10415 b05818aa3883c10779b9fad0c23d74f6 247 PANTHER PTHR33121:SF2 9 236 6.3E-20 T 22-04-2016 LK04_RS10415 b05818aa3883c10779b9fad0c23d74f6 247 Gene3D G3DSA:3.20.20.450 106 233 2.3E-11 T 22-04-2016 IPR001633 EAL domain LK04_RS10415 b05818aa3883c10779b9fad0c23d74f6 247 Pfam PF00563 EAL domain 11 223 2.5E-13 T 22-04-2016 IPR001633 EAL domain LK04_RS10415 b05818aa3883c10779b9fad0c23d74f6 247 PANTHER PTHR33121 9 236 6.3E-20 T 22-04-2016 LK04_RS07630 66a083d3688272aa9516b7e2ba992239 222 Pfam PF05944 Phage small terminase subunit 35 165 1.8E-44 T 22-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 LK04_RS04825 a9e8f6cbcee2e14c5eb2880af936703d 411 Pfam PF00155 Aminotransferase class I and II 37 381 4.5E-57 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS04825 a9e8f6cbcee2e14c5eb2880af936703d 411 PANTHER PTHR11751 18 401 3.1E-267 T 22-04-2016 LK04_RS04825 a9e8f6cbcee2e14c5eb2880af936703d 411 PANTHER PTHR11751:SF302 18 401 3.1E-267 T 22-04-2016 LK04_RS04825 a9e8f6cbcee2e14c5eb2880af936703d 411 Gene3D G3DSA:3.40.640.10 50 263 5.4E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS04825 a9e8f6cbcee2e14c5eb2880af936703d 411 Gene3D G3DSA:3.90.1150.10 264 395 7.9E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS04825 a9e8f6cbcee2e14c5eb2880af936703d 411 SUPERFAMILY SSF53383 9 394 4.98E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS01255 285279d1aba15a485fab2447c1ea1e6b 88 SUPERFAMILY SSF159871 3 88 7.59E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS01255 285279d1aba15a485fab2447c1ea1e6b 88 Pfam PF07338 Protein of unknown function (DUF1471) 40 88 2.1E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS01255 285279d1aba15a485fab2447c1ea1e6b 88 PANTHER PTHR34156 2 88 1.8E-29 T 22-04-2016 LK04_RS01255 285279d1aba15a485fab2447c1ea1e6b 88 Gene3D G3DSA:3.30.1660.10 18 88 5.2E-23 T 22-04-2016 IPR025543 Dodecin-like LK04_RS01255 285279d1aba15a485fab2447c1ea1e6b 88 PANTHER PTHR34156:SF5 2 88 1.8E-29 T 22-04-2016 LK04_RS17105 9ab5209696ce67bfc52e141e2063ef28 411 Pfam PF05992 SbmA/BacA-like family 84 397 1.4E-159 T 22-04-2016 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 LK04_RS17105 9ab5209696ce67bfc52e141e2063ef28 411 SUPERFAMILY SSF90123 92 394 7.95E-8 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS17105 9ab5209696ce67bfc52e141e2063ef28 411 PANTHER PTHR11384:SF3 75 411 6.3E-34 T 22-04-2016 LK04_RS17105 9ab5209696ce67bfc52e141e2063ef28 411 PANTHER PTHR11384 75 411 6.3E-34 T 22-04-2016 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 SUPERFAMILY SSF103473 13 194 5.76E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 SUPERFAMILY SSF103473 244 450 5.76E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 414 4.5E-76 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 PANTHER PTHR23501:SF1 1 466 6.4E-284 T 22-04-2016 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 Pfam PF07690 Major Facilitator Superfamily 16 377 3.7E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 Gene3D G3DSA:1.20.1250.20 13 188 6.0E-25 T 22-04-2016 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 Gene3D G3DSA:1.20.1250.20 258 453 1.6E-16 T 22-04-2016 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 1.4E-9 T 22-04-2016 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 160 184 1.4E-9 T 22-04-2016 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 1.4E-9 T 22-04-2016 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 1.4E-9 T 22-04-2016 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 1.4E-9 T 22-04-2016 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 1.4E-9 T 22-04-2016 LK04_RS19130 96388c532d81e2f8bbd309d51049b306 467 PANTHER PTHR23501 1 466 6.4E-284 T 22-04-2016 LK04_RS00275 4b8776659372b01c4889ed584626612f 259 Pfam PF01300 Telomere recombination 22 185 7.5E-10 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 LK04_RS00275 4b8776659372b01c4889ed584626612f 259 Gene3D G3DSA:3.90.870.10 15 185 1.1E-23 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LK04_RS00275 4b8776659372b01c4889ed584626612f 259 SUPERFAMILY SSF55821 9 189 1.07E-20 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LK04_RS14575 cc14194f6cdc0f1cf7ed78f985baed49 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 31.577 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 LK04_RS14575 cc14194f6cdc0f1cf7ed78f985baed49 133 Pfam PF07417 Transcriptional regulator Crl 5 121 4.0E-53 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 LK04_RS05190 732f86e5fde745b5ad06253991079062 219 PANTHER PTHR30070:SF1 1 219 1.7E-73 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05190 732f86e5fde745b5ad06253991079062 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 2.8E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05190 732f86e5fde745b5ad06253991079062 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 2.8E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05190 732f86e5fde745b5ad06253991079062 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 2.8E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05190 732f86e5fde745b5ad06253991079062 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 2.8E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05190 732f86e5fde745b5ad06253991079062 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 2.8E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05190 732f86e5fde745b5ad06253991079062 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 2.8E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05190 732f86e5fde745b5ad06253991079062 219 Pfam PF03379 CcmB protein 4 216 6.7E-91 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LK04_RS05190 732f86e5fde745b5ad06253991079062 219 PANTHER PTHR30070 1 219 1.7E-73 T 22-04-2016 LK04_RS05190 732f86e5fde745b5ad06253991079062 219 PIRSF PIRSF002764 1 219 3.5E-83 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria LK04_RS05190 732f86e5fde745b5ad06253991079062 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 4.6E-95 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria LK04_RS12465 a593608c493b60e089d22151191b18ba 302 SUPERFAMILY SSF103481 188 281 2.88E-11 T 22-04-2016 LK04_RS12465 a593608c493b60e089d22151191b18ba 302 Pfam PF00892 EamA-like transporter family 151 280 1.4E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS12465 a593608c493b60e089d22151191b18ba 302 PANTHER PTHR22911 9 299 3.6E-98 T 22-04-2016 LK04_RS12465 a593608c493b60e089d22151191b18ba 302 PANTHER PTHR22911:SF37 9 299 3.6E-98 T 22-04-2016 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 PANTHER PTHR22939 199 449 3.3E-108 T 22-04-2016 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 SUPERFAMILY SSF50156 86 187 1.97E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 214 276 2.5E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 Gene3D G3DSA:2.30.42.10 96 190 4.5E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 SMART SM00228 211 280 7.6E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 SMART SM00228 115 186 0.062 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 449 6.7E-161 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 Pfam PF02163 Peptidase family M50 10 437 4.8E-87 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 PANTHER PTHR22939:SF78 199 449 3.3E-108 T 22-04-2016 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 Gene3D G3DSA:2.30.42.10 223 296 1.8E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS14950 ef47ef833a11d25bdc426929c33934ee 449 SUPERFAMILY SSF50156 195 292 3.94E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LK04_RS09035 722153302e8cc31c7cd4e470816000ef 699 Pfam PF04632 Fusaric acid resistance protein family 9 642 3.9E-135 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 LK04_RS09035 722153302e8cc31c7cd4e470816000ef 699 PANTHER PTHR30509 1 247 1.4E-78 T 22-04-2016 LK04_RS09035 722153302e8cc31c7cd4e470816000ef 699 PANTHER PTHR30509 311 657 1.4E-78 T 22-04-2016 LK04_RS09035 722153302e8cc31c7cd4e470816000ef 699 PANTHER PTHR30509:SF1 1 247 1.4E-78 T 22-04-2016 LK04_RS09035 722153302e8cc31c7cd4e470816000ef 699 PANTHER PTHR30509:SF1 311 657 1.4E-78 T 22-04-2016 LK04_RS07975 79fc40c5a38a87b76c2d339a613e8a30 291 Pfam PF01263 Aldose 1-epimerase 29 271 1.4E-41 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 LK04_RS07975 79fc40c5a38a87b76c2d339a613e8a30 291 PANTHER PTHR11122:SF14 1 291 3.5E-113 T 22-04-2016 LK04_RS07975 79fc40c5a38a87b76c2d339a613e8a30 291 PIRSF PIRSF016020 11 290 6.3E-53 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 LK04_RS07975 79fc40c5a38a87b76c2d339a613e8a30 291 PANTHER PTHR11122 1 291 3.5E-113 T 22-04-2016 LK04_RS07975 79fc40c5a38a87b76c2d339a613e8a30 291 SUPERFAMILY SSF74650 8 273 4.14E-66 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LK04_RS07975 79fc40c5a38a87b76c2d339a613e8a30 291 Gene3D G3DSA:2.70.98.10 11 287 9.0E-84 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LK04_RS08275 d067bdfd5c26d1d27f0f6b8bf5cdc4ca 101 Pfam PF06305 Protein of unknown function (DUF1049) 24 86 5.9E-19 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 LK04_RS08275 d067bdfd5c26d1d27f0f6b8bf5cdc4ca 101 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.444 T 22-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 LK04_RS06285 a47586e3a157e926876f63e728305a50 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.0E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS06285 a47586e3a157e926876f63e728305a50 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.0E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS06285 a47586e3a157e926876f63e728305a50 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 3.0E-46 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain LK04_RS06285 a47586e3a157e926876f63e728305a50 253 Gene3D G3DSA:3.30.750.70 75 151 3.1E-8 T 22-04-2016 LK04_RS06285 a47586e3a157e926876f63e728305a50 253 SMART SM00420 6 58 5.2E-23 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS06285 a47586e3a157e926876f63e728305a50 253 Gene3D G3DSA:1.10.10.10 5 57 2.7E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06285 a47586e3a157e926876f63e728305a50 253 SMART SM01134 73 233 6.5E-63 T 22-04-2016 LK04_RS06285 a47586e3a157e926876f63e728305a50 253 PANTHER PTHR30363 1 252 1.5E-138 T 22-04-2016 LK04_RS06285 a47586e3a157e926876f63e728305a50 253 PANTHER PTHR30363:SF5 1 252 1.5E-138 T 22-04-2016 LK04_RS06285 a47586e3a157e926876f63e728305a50 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LK04_RS06285 a47586e3a157e926876f63e728305a50 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 3.2E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LK04_RS06285 a47586e3a157e926876f63e728305a50 253 SUPERFAMILY SSF46785 5 62 7.49E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06285 a47586e3a157e926876f63e728305a50 253 SUPERFAMILY SSF100950 75 233 1.04E-26 T 22-04-2016 LK04_RS02055 e82943a2d15cdc1061c420264bad08c4 363 Pfam PF02378 Phosphotransferase system, EIIC 19 270 9.0E-11 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LK04_RS02055 e82943a2d15cdc1061c420264bad08c4 363 PANTHER PTHR30505:SF0 3 358 8.4E-119 T 22-04-2016 LK04_RS02055 e82943a2d15cdc1061c420264bad08c4 363 PANTHER PTHR30505 3 358 8.4E-119 T 22-04-2016 LK04_RS02055 e82943a2d15cdc1061c420264bad08c4 363 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 4 335 1.0E-91 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 LK04_RS11115 a42730c4a38012f2f333bbb8639e96ba 418 PANTHER PTHR30414:SF0 3 408 1.2E-104 T 22-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 LK04_RS11115 a42730c4a38012f2f333bbb8639e96ba 418 SUPERFAMILY SSF50182 183 249 8.83E-11 T 22-04-2016 IPR010920 LSM domain LK04_RS11115 a42730c4a38012f2f333bbb8639e96ba 418 PANTHER PTHR30414 3 408 1.2E-104 T 22-04-2016 LK04_RS11115 a42730c4a38012f2f333bbb8639e96ba 418 Pfam PF00924 Mechanosensitive ion channel 142 387 8.7E-40 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LK04_RS11115 a42730c4a38012f2f333bbb8639e96ba 418 Gene3D G3DSA:2.30.30.60 200 249 9.8E-11 T 22-04-2016 LK04_RS10215 d37662f77646a8f5c5186c48672dce2c 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 68 2.6E-13 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 LK04_RS02465 dcf7bc435744f01c2ed7e2b58cb36a70 271 SMART SM00062 33 265 3.5E-15 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS02465 dcf7bc435744f01c2ed7e2b58cb36a70 271 Gene3D G3DSA:3.40.190.10 113 213 1.3E-12 T 22-04-2016 LK04_RS02465 dcf7bc435744f01c2ed7e2b58cb36a70 271 Gene3D G3DSA:3.40.190.10 32 112 1.2E-19 T 22-04-2016 LK04_RS02465 dcf7bc435744f01c2ed7e2b58cb36a70 271 Gene3D G3DSA:3.40.190.10 222 267 1.2E-19 T 22-04-2016 LK04_RS02465 dcf7bc435744f01c2ed7e2b58cb36a70 271 SUPERFAMILY SSF53850 32 266 1.15E-32 T 22-04-2016 LK04_RS02465 dcf7bc435744f01c2ed7e2b58cb36a70 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 264 2.0E-33 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS18440 d84793d40c25421b3926fae003c2aeac 313 SUPERFAMILY SSF161098 92 298 1.03E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18440 d84793d40c25421b3926fae003c2aeac 313 PANTHER PTHR30465 1 313 2.1E-124 T 22-04-2016 LK04_RS18440 d84793d40c25421b3926fae003c2aeac 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 1.6E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18440 d84793d40c25421b3926fae003c2aeac 313 Gene3D G3DSA:1.10.3720.10 90 304 3.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18440 d84793d40c25421b3926fae003c2aeac 313 PANTHER PTHR30465:SF0 1 313 2.1E-124 T 22-04-2016 LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 PANTHER PTHR30128 16 219 1.0E-72 T 22-04-2016 LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 Gene3D G3DSA:3.30.1330.60 96 216 6.0E-40 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 1.3E-6 T 22-04-2016 LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 1.3E-6 T 22-04-2016 LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 1.3E-6 T 22-04-2016 LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 PRINTS PR01021 OMPA domain signature 161 177 1.7E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 PRINTS PR01021 OMPA domain signature 146 161 1.7E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 PRINTS PR01021 OMPA domain signature 116 138 1.7E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 SUPERFAMILY SSF103088 103 218 3.66E-38 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 Pfam PF00691 OmpA family 115 210 4.4E-21 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS18915 ce2fc0b90cf55c4455b19215102e2a9b 220 Pfam PF13488 Glycine zipper 37 85 3.1E-11 T 22-04-2016 LK04_RS12295 b399291654d8f9836376c235d9b123a7 87 PANTHER PTHR10168 1 82 1.1E-33 T 22-04-2016 LK04_RS12295 b399291654d8f9836376c235d9b123a7 87 Gene3D G3DSA:3.40.30.10 4 82 6.0E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS12295 b399291654d8f9836376c235d9b123a7 87 Pfam PF00462 Glutaredoxin 4 69 2.8E-14 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LK04_RS12295 b399291654d8f9836376c235d9b123a7 87 SUPERFAMILY SSF52833 4 82 1.75E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS12295 b399291654d8f9836376c235d9b123a7 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 LK04_RS12295 b399291654d8f9836376c235d9b123a7 87 PANTHER PTHR10168:SF85 1 82 1.1E-33 T 22-04-2016 LK04_RS12295 b399291654d8f9836376c235d9b123a7 87 PRINTS PR00160 Glutaredoxin signature 3 21 6.5E-10 T 22-04-2016 IPR014025 Glutaredoxin subgroup LK04_RS12295 b399291654d8f9836376c235d9b123a7 87 PRINTS PR00160 Glutaredoxin signature 52 65 6.5E-10 T 22-04-2016 IPR014025 Glutaredoxin subgroup LK04_RS12295 b399291654d8f9836376c235d9b123a7 87 PRINTS PR00160 Glutaredoxin signature 66 79 6.5E-10 T 22-04-2016 IPR014025 Glutaredoxin subgroup LK04_RS12295 b399291654d8f9836376c235d9b123a7 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 3 86 9.5E-41 T 22-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 LK04_RS05625 f442d276dcde3c87e803247cfdda64b5 384 PANTHER PTHR23514 14 384 4.7E-114 T 22-04-2016 LK04_RS05625 f442d276dcde3c87e803247cfdda64b5 384 PANTHER PTHR23514:SF13 14 384 4.7E-114 T 22-04-2016 LK04_RS05625 f442d276dcde3c87e803247cfdda64b5 384 Gene3D G3DSA:1.20.1250.20 22 191 4.5E-16 T 22-04-2016 LK04_RS05625 f442d276dcde3c87e803247cfdda64b5 384 Gene3D G3DSA:1.20.1250.20 210 380 6.4E-14 T 22-04-2016 LK04_RS05625 f442d276dcde3c87e803247cfdda64b5 384 SUPERFAMILY SSF103473 15 382 1.29E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05625 f442d276dcde3c87e803247cfdda64b5 384 Pfam PF07690 Major Facilitator Superfamily 231 377 3.7E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS05625 f442d276dcde3c87e803247cfdda64b5 384 Pfam PF07690 Major Facilitator Superfamily 22 198 7.4E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 PANTHER PTHR30445:SF4 3 558 0.0 T 22-04-2016 LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 Gene3D G3DSA:3.30.70.1450 230 282 4.0E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 Gene3D G3DSA:3.30.70.1450 303 375 6.5E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 Pfam PF02080 TrkA-C domain 305 371 1.2E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 PANTHER PTHR30445 3 558 0.0 T 22-04-2016 LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 Pfam PF06826 Predicted Permease Membrane Region 17 180 2.2E-39 T 22-04-2016 IPR006512 YidE/YbjL duplication LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 Pfam PF06826 Predicted Permease Membrane Region 385 554 5.7E-42 T 22-04-2016 IPR006512 YidE/YbjL duplication LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 541 3.7E-44 T 22-04-2016 IPR006512 YidE/YbjL duplication LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 4.0E-38 T 22-04-2016 IPR006512 YidE/YbjL duplication LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 56.61 T 22-04-2016 IPR023017 Transport protein YbjL, putative LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 SUPERFAMILY SSF116726 291 374 7.46E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS12305 369e94f7677e7b3098a8b4ba3cb2de39 562 SUPERFAMILY SSF116726 230 282 1.16E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LK04_RS02395 12b9133494010337a614f7ee058a21f2 464 PANTHER PTHR23501 12 447 3.5E-101 T 22-04-2016 LK04_RS02395 12b9133494010337a614f7ee058a21f2 464 PANTHER PTHR23501:SF66 12 447 3.5E-101 T 22-04-2016 LK04_RS02395 12b9133494010337a614f7ee058a21f2 464 SUPERFAMILY SSF103473 247 448 1.83E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02395 12b9133494010337a614f7ee058a21f2 464 SUPERFAMILY SSF103473 15 203 1.83E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02395 12b9133494010337a614f7ee058a21f2 464 Gene3D G3DSA:1.20.1250.20 268 453 4.1E-10 T 22-04-2016 LK04_RS02395 12b9133494010337a614f7ee058a21f2 464 Pfam PF07690 Major Facilitator Superfamily 18 407 1.3E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS02395 12b9133494010337a614f7ee058a21f2 464 Gene3D G3DSA:1.20.1250.20 16 198 8.0E-28 T 22-04-2016 LK04_RS01450 2ab3d6202a4a60247530c98e6eecdfdd 184 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 2.0E-76 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ LK04_RS01450 2ab3d6202a4a60247530c98e6eecdfdd 184 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 7 183 9.8E-84 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ LK04_RS01450 2ab3d6202a4a60247530c98e6eecdfdd 184 Gene3D G3DSA:3.40.30.10 114 176 1.8E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS13880 40c9d6b8f08e274ea1255de082757a99 72 SUPERFAMILY SSF68989 2 72 1.83E-31 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA LK04_RS13880 40c9d6b8f08e274ea1255de082757a99 72 Gene3D G3DSA:1.20.1280.40 5 72 2.2E-37 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA LK04_RS13880 40c9d6b8f08e274ea1255de082757a99 72 Pfam PF05321 Haemolysin expression modulating protein 13 69 2.7E-33 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA LK04_RS07490 cd6374f8190f0b8cfa6d4a8ab1eebc8d 222 Pfam PF00929 Exonuclease 4 147 7.7E-14 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LK04_RS07490 cd6374f8190f0b8cfa6d4a8ab1eebc8d 222 SUPERFAMILY SSF53098 4 152 2.93E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS07490 cd6374f8190f0b8cfa6d4a8ab1eebc8d 222 PANTHER PTHR30231 4 215 9.1E-41 T 22-04-2016 LK04_RS07490 cd6374f8190f0b8cfa6d4a8ab1eebc8d 222 Gene3D G3DSA:3.30.420.10 4 153 1.8E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS07490 cd6374f8190f0b8cfa6d4a8ab1eebc8d 222 SMART SM00479 1 156 4.7E-35 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LK04_RS17410 4f98d617224eb6b7159f4c1d0660b0c4 178 PANTHER PTHR11603 1 176 2.8E-107 T 22-04-2016 LK04_RS17410 4f98d617224eb6b7159f4c1d0660b0c4 178 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 171 4.0E-66 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 LK04_RS17410 4f98d617224eb6b7159f4c1d0660b0c4 178 PANTHER PTHR11603:SF154 1 176 2.8E-107 T 22-04-2016 LK04_RS17410 4f98d617224eb6b7159f4c1d0660b0c4 178 Gene3D G3DSA:3.40.50.300 5 173 1.6E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17410 4f98d617224eb6b7159f4c1d0660b0c4 178 SUPERFAMILY SSF52540 6 172 4.51E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17410 4f98d617224eb6b7159f4c1d0660b0c4 178 Pfam PF01202 Shikimate kinase 17 171 2.1E-13 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LK04_RS12260 a7cc6c0555c661c1c6c6c2f2dc3f09de 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 313 7.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12260 a7cc6c0555c661c1c6c6c2f2dc3f09de 318 PANTHER PTHR30193:SF5 4 318 2.6E-152 T 22-04-2016 LK04_RS12260 a7cc6c0555c661c1c6c6c2f2dc3f09de 318 SUPERFAMILY SSF161098 30 309 1.03E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12260 a7cc6c0555c661c1c6c6c2f2dc3f09de 318 PANTHER PTHR30193 4 318 2.6E-152 T 22-04-2016 LK04_RS12260 a7cc6c0555c661c1c6c6c2f2dc3f09de 318 Gene3D G3DSA:1.10.3720.10 30 312 5.2E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12845 bc931cbb9fb8fe6af67adb7c3eb1ada7 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 1.2E-70 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 LK04_RS12845 bc931cbb9fb8fe6af67adb7c3eb1ada7 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 157 35.955 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 LK04_RS12845 bc931cbb9fb8fe6af67adb7c3eb1ada7 160 Pfam PF01967 MoaC family 14 149 7.3E-54 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 LK04_RS12845 bc931cbb9fb8fe6af67adb7c3eb1ada7 160 PANTHER PTHR22960 2 157 3.9E-107 T 22-04-2016 LK04_RS12845 bc931cbb9fb8fe6af67adb7c3eb1ada7 160 Gene3D G3DSA:3.30.70.640 2 156 6.0E-69 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 LK04_RS12845 bc931cbb9fb8fe6af67adb7c3eb1ada7 160 SUPERFAMILY SSF55040 10 154 9.02E-61 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 LK04_RS16845 356922e8160785721894f48efae67115 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 50 226 1.2E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16845 356922e8160785721894f48efae67115 231 PANTHER PTHR30614 1 231 1.3E-66 T 22-04-2016 LK04_RS16845 356922e8160785721894f48efae67115 231 Gene3D G3DSA:1.10.3720.10 15 227 2.9E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16845 356922e8160785721894f48efae67115 231 SUPERFAMILY SSF161098 16 211 1.28E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS16845 356922e8160785721894f48efae67115 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 120 8.0E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS16655 3ac8796c0ba46a26991af2b189e5ce31 240 Pfam PF00912 Transglycosylase 60 225 2.0E-48 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LK04_RS16655 3ac8796c0ba46a26991af2b189e5ce31 240 Gene3D G3DSA:1.10.3810.10 62 229 9.0E-57 T 22-04-2016 LK04_RS16655 3ac8796c0ba46a26991af2b189e5ce31 240 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 13 229 5.4E-81 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 LK04_RS16655 3ac8796c0ba46a26991af2b189e5ce31 240 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 8 231 42.225 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 LK04_RS16655 3ac8796c0ba46a26991af2b189e5ce31 240 PANTHER PTHR30400:SF0 10 236 9.4E-108 T 22-04-2016 LK04_RS16655 3ac8796c0ba46a26991af2b189e5ce31 240 PANTHER PTHR30400 10 236 9.4E-108 T 22-04-2016 LK04_RS16655 3ac8796c0ba46a26991af2b189e5ce31 240 SUPERFAMILY SSF53955 55 229 2.31E-57 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS16355 8ebe55e9e31507ee6ae7c02fbbe67de4 336 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 330 3.0E-135 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 LK04_RS16355 8ebe55e9e31507ee6ae7c02fbbe67de4 336 Pfam PF00296 Luciferase-like monooxygenase 20 305 1.0E-37 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS16355 8ebe55e9e31507ee6ae7c02fbbe67de4 336 Gene3D G3DSA:3.20.20.30 8 328 4.5E-91 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS16355 8ebe55e9e31507ee6ae7c02fbbe67de4 336 PANTHER PTHR30137:SF2 1 336 5.1E-149 T 22-04-2016 LK04_RS16355 8ebe55e9e31507ee6ae7c02fbbe67de4 336 PANTHER PTHR30137 1 336 5.1E-149 T 22-04-2016 LK04_RS16355 8ebe55e9e31507ee6ae7c02fbbe67de4 336 SUPERFAMILY SSF51679 8 328 7.66E-85 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LK04_RS08350 31d31530427c168148bc466024bfdb40 373 Gene3D G3DSA:1.20.1290.10 277 371 8.9E-10 T 22-04-2016 IPR029032 AhpD-like LK04_RS08350 31d31530427c168148bc466024bfdb40 373 Gene3D G3DSA:1.20.1290.10 84 194 3.7E-15 T 22-04-2016 IPR029032 AhpD-like LK04_RS08350 31d31530427c168148bc466024bfdb40 373 SUPERFAMILY SSF69118 56 190 5.47E-14 T 22-04-2016 IPR029032 AhpD-like LK04_RS08350 31d31530427c168148bc466024bfdb40 373 SUPERFAMILY SSF69118 215 370 1.98E-9 T 22-04-2016 IPR029032 AhpD-like LK04_RS09350 773b9669cd582c304909de9b6d7a361a 364 SUPERFAMILY SSF51395 4 354 1.35E-96 T 22-04-2016 LK04_RS09350 773b9669cd582c304909de9b6d7a361a 364 Gene3D G3DSA:3.20.20.70 1 349 1.6E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS09350 773b9669cd582c304909de9b6d7a361a 364 PANTHER PTHR22893 1 348 3.3E-98 T 22-04-2016 LK04_RS09350 773b9669cd582c304909de9b6d7a361a 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 343 1.4E-68 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LK04_RS19480 7fc34b19f9018a9b1a4ce0eb715d7478 300 PANTHER PTHR30105 7 254 4.9E-90 T 22-04-2016 LK04_RS19480 7fc34b19f9018a9b1a4ce0eb715d7478 300 SUPERFAMILY SSF88713 23 237 3.22E-70 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LK04_RS19480 7fc34b19f9018a9b1a4ce0eb715d7478 300 Pfam PF04748 Divergent polysaccharide deacetylase 27 237 3.0E-73 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ LK04_RS19480 7fc34b19f9018a9b1a4ce0eb715d7478 300 Gene3D G3DSA:3.20.20.370 13 245 2.0E-102 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LK04_RS13055 ae513def774415adc1942fd8c9574bfe 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 94 5.1E-31 T 22-04-2016 IPR011846 Cyd operon protein YbgE LK04_RS13055 ae513def774415adc1942fd8c9574bfe 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 5 95 5.0E-35 T 22-04-2016 IPR011846 Cyd operon protein YbgE LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 SUPERFAMILY SSF51445 43 356 9.6E-85 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 SUPERFAMILY SSF51445 396 533 9.6E-85 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 PIRSF PIRSF003059 1 562 2.2E-199 T 22-04-2016 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 Gene3D G3DSA:3.90.400.10 133 201 1.9E-23 T 22-04-2016 LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 Pfam PF00128 Alpha amylase, catalytic domain 82 337 8.3E-21 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 Gene3D G3DSA:3.20.20.80 45 132 2.6E-99 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 Gene3D G3DSA:3.20.20.80 208 480 2.6E-99 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 SMART SM00642 65 479 1.2E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 PANTHER PTHR10357:SF132 388 542 5.6E-148 T 22-04-2016 LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 PANTHER PTHR10357:SF132 77 339 5.6E-148 T 22-04-2016 LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 PANTHER PTHR10357 388 542 5.6E-148 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 PANTHER PTHR10357 77 339 5.6E-148 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LK04_RS00545 44d171b2351c3ca92cf83d43e8477d6f 562 Gene3D G3DSA:2.60.40.1180 497 561 3.0E-11 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta LK04_RS14625 fcfd5f77cd1e832cc0712829b86b753f 192 PANTHER PTHR30390:SF6 2 192 4.9E-95 T 22-04-2016 LK04_RS14625 fcfd5f77cd1e832cc0712829b86b753f 192 Gene3D G3DSA:3.40.50.10490 1 190 3.2E-64 T 22-04-2016 LK04_RS14625 fcfd5f77cd1e832cc0712829b86b753f 192 SUPERFAMILY SSF53697 1 189 2.04E-52 T 22-04-2016 LK04_RS14625 fcfd5f77cd1e832cc0712829b86b753f 192 PANTHER PTHR30390 2 192 4.9E-95 T 22-04-2016 LK04_RS14625 fcfd5f77cd1e832cc0712829b86b753f 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.0E-83 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 LK04_RS14625 fcfd5f77cd1e832cc0712829b86b753f 192 Pfam PF13580 SIS domain 24 146 3.6E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS14625 fcfd5f77cd1e832cc0712829b86b753f 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.631 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 SUPERFAMILY SSF51735 3 242 3.2E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 243 2.2E-131 T 22-04-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 Gene3D G3DSA:3.40.50.720 3 242 3.0E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 1.6E-57 T 22-04-2016 LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 6.4E-4 T 22-04-2016 LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PANTHER PTHR24322 153 184 4.4E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PANTHER PTHR24322 7 137 4.4E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS11550 bbda9d38b05220073050da7f11fc33a0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.5E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS06300 06bd7ef9ad8ad3dba5c566fe68a3f99a 208 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 185 9.2E-44 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS06300 06bd7ef9ad8ad3dba5c566fe68a3f99a 208 PANTHER PTHR22789:SF6 1 207 1.2E-120 T 22-04-2016 LK04_RS06300 06bd7ef9ad8ad3dba5c566fe68a3f99a 208 Gene3D G3DSA:3.40.225.10 1 206 6.8E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS06300 06bd7ef9ad8ad3dba5c566fe68a3f99a 208 SUPERFAMILY SSF53639 1 207 4.71E-61 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS06300 06bd7ef9ad8ad3dba5c566fe68a3f99a 208 SMART SM01007 8 187 1.1E-57 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LK04_RS06300 06bd7ef9ad8ad3dba5c566fe68a3f99a 208 PANTHER PTHR22789 1 207 1.2E-120 T 22-04-2016 LK04_RS11650 304714bcd755a375303a554d49c6d900 85 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 25 83 4.0E-10 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 LK04_RS11650 304714bcd755a375303a554d49c6d900 85 Pfam PF10798 Biofilm development protein YmgB/AriR 25 82 1.6E-27 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 LK04_RS07685 96f78f6be824d85167826db9e9bc1d5f 113 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 1 111 2.0E-28 T 22-04-2016 LK04_RS02815 e3be30a8c0f42c21600e15e711048795 246 PANTHER PTHR21485:SF4 3 241 1.3E-94 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LK04_RS02815 e3be30a8c0f42c21600e15e711048795 246 PANTHER PTHR21485 3 241 1.3E-94 T 22-04-2016 LK04_RS02815 e3be30a8c0f42c21600e15e711048795 246 Pfam PF02348 Cytidylyltransferase 5 210 1.6E-53 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LK04_RS02815 e3be30a8c0f42c21600e15e711048795 246 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 239 39.882 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LK04_RS02815 e3be30a8c0f42c21600e15e711048795 246 Gene3D G3DSA:3.90.550.10 4 240 7.9E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS02815 e3be30a8c0f42c21600e15e711048795 246 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 5 231 1.9E-63 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LK04_RS02815 e3be30a8c0f42c21600e15e711048795 246 SUPERFAMILY SSF53448 4 242 9.91E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS03130 11369aef1e13537daf74cedbdd1cc78c 62 SUPERFAMILY SSF47598 13 58 5.34E-6 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LK04_RS07520 ab643c5ad48bff39eff640076352ed93 391 SUPERFAMILY SSF69279 17 189 3.23E-26 T 22-04-2016 LK04_RS07520 ab643c5ad48bff39eff640076352ed93 391 Pfam PF05954 Phage late control gene D protein (GPD) 50 362 3.9E-34 T 22-04-2016 LK04_RS00170 c791413036377e21d062c21ac7f953ba 464 PANTHER PTHR11662:SF18 8 464 9.8E-153 T 22-04-2016 LK04_RS00170 c791413036377e21d062c21ac7f953ba 464 Pfam PF07690 Major Facilitator Superfamily 21 400 4.6E-58 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS00170 c791413036377e21d062c21ac7f953ba 464 SUPERFAMILY SSF103473 7 436 6.8E-82 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS00170 c791413036377e21d062c21ac7f953ba 464 Gene3D G3DSA:1.20.1250.20 6 212 2.2E-45 T 22-04-2016 LK04_RS00170 c791413036377e21d062c21ac7f953ba 464 Gene3D G3DSA:1.20.1250.20 242 435 7.7E-29 T 22-04-2016 LK04_RS00170 c791413036377e21d062c21ac7f953ba 464 PANTHER PTHR11662 8 464 9.8E-153 T 22-04-2016 LK04_RS00170 c791413036377e21d062c21ac7f953ba 464 PIRSF PIRSF002808 1 450 1.2E-43 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LK04_RS03265 3ddd5479bb64d6af5b3e866f03948916 411 Gene3D G3DSA:3.40.630.40 183 280 1.2E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS03265 3ddd5479bb64d6af5b3e866f03948916 411 Gene3D G3DSA:3.40.630.40 327 403 1.2E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS03265 3ddd5479bb64d6af5b3e866f03948916 411 Pfam PF11741 AMIN domain 36 139 8.0E-27 T 22-04-2016 IPR021731 AMIN domain LK04_RS03265 3ddd5479bb64d6af5b3e866f03948916 411 PANTHER PTHR30404 10 403 3.0E-121 T 22-04-2016 LK04_RS03265 3ddd5479bb64d6af5b3e866f03948916 411 PANTHER PTHR30404:SF0 10 403 3.0E-121 T 22-04-2016 LK04_RS03265 3ddd5479bb64d6af5b3e866f03948916 411 SMART SM00646 245 399 1.1E-64 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS03265 3ddd5479bb64d6af5b3e866f03948916 411 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 185 399 5.0E-49 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LK04_RS03265 3ddd5479bb64d6af5b3e866f03948916 411 SUPERFAMILY SSF53187 326 402 1.26E-52 T 22-04-2016 LK04_RS03265 3ddd5479bb64d6af5b3e866f03948916 411 SUPERFAMILY SSF53187 183 279 1.26E-52 T 22-04-2016 LK04_RS00460 1444aec5604df4604a06145760e7f2e7 281 PANTHER PTHR30514:SF3 11 268 3.0E-88 T 22-04-2016 LK04_RS00460 1444aec5604df4604a06145760e7f2e7 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 80 7.3E-13 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LK04_RS00460 1444aec5604df4604a06145760e7f2e7 281 Gene3D G3DSA:1.10.10.10 11 85 3.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS00460 1444aec5604df4604a06145760e7f2e7 281 SUPERFAMILY SSF46689 13 86 4.3E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS00460 1444aec5604df4604a06145760e7f2e7 281 Gene3D G3DSA:3.40.50.10490 119 275 1.1E-29 T 22-04-2016 LK04_RS00460 1444aec5604df4604a06145760e7f2e7 281 Pfam PF01380 SIS domain 144 270 1.5E-26 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS00460 1444aec5604df4604a06145760e7f2e7 281 SUPERFAMILY SSF53697 110 273 1.72E-28 T 22-04-2016 LK04_RS00460 1444aec5604df4604a06145760e7f2e7 281 PANTHER PTHR30514 11 268 3.0E-88 T 22-04-2016 LK04_RS08060 e8d8f39e4c92e1a10d3e3cee0fc7eda2 338 SMART SM00448 8 120 9.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS08060 e8d8f39e4c92e1a10d3e3cee0fc7eda2 338 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 53.269 T 22-04-2016 IPR028616 Regulator of RpoS LK04_RS08060 e8d8f39e4c92e1a10d3e3cee0fc7eda2 338 Pfam PF00072 Response regulator receiver domain 10 119 1.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LK04_RS08060 e8d8f39e4c92e1a10d3e3cee0fc7eda2 338 SUPERFAMILY SSF52172 8 128 1.24E-30 T 22-04-2016 IPR011006 CheY-like superfamily LK04_RS08060 e8d8f39e4c92e1a10d3e3cee0fc7eda2 338 PANTHER PTHR26402 8 152 2.2E-71 T 22-04-2016 LK04_RS08060 e8d8f39e4c92e1a10d3e3cee0fc7eda2 338 Gene3D G3DSA:3.40.50.2300 8 125 6.9E-30 T 22-04-2016 LK04_RS08060 e8d8f39e4c92e1a10d3e3cee0fc7eda2 338 PANTHER PTHR26402:SF554 8 152 2.2E-71 T 22-04-2016 LK04_RS19845 2aa0f50d7a5ddf3ccbc3db52f27ace1f 119 PANTHER PTHR40455 3 117 5.8E-17 T 22-04-2016 LK04_RS19845 2aa0f50d7a5ddf3ccbc3db52f27ace1f 119 SMART SM00530 62 116 4.0E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS19845 2aa0f50d7a5ddf3ccbc3db52f27ace1f 119 Gene3D G3DSA:1.10.260.40 45 118 7.1E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS19845 2aa0f50d7a5ddf3ccbc3db52f27ace1f 119 SUPERFAMILY SSF47413 59 117 1.35E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS19845 2aa0f50d7a5ddf3ccbc3db52f27ace1f 119 PANTHER PTHR40455:SF1 3 117 5.8E-17 T 22-04-2016 LK04_RS19845 2aa0f50d7a5ddf3ccbc3db52f27ace1f 119 Pfam PF01381 Helix-turn-helix 64 114 1.3E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LK04_RS04600 84775a65f331b0cadbf5fe5fe3af2a7c 152 Pfam PF11143 Protein of unknown function (DUF2919) 5 144 5.9E-47 T 22-04-2016 IPR021318 Protein of unknown function DUF2919 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 PANTHER PTHR12216:SF3 10 561 0.0 T 22-04-2016 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 Gene3D G3DSA:3.40.1770.10 10 142 2.1E-160 T 22-04-2016 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 Gene3D G3DSA:3.40.1770.10 365 560 2.1E-160 T 22-04-2016 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 PIRSF PIRSF001423 1 561 1.3E-292 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 ProSitePatterns PS01233 Urocanase signature. 447 462 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 Hamap MF_00577 Urocanate hydratase [hutU]. 1 561 50.113 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 PANTHER PTHR12216 10 561 0.0 T 22-04-2016 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 559 1.6E-287 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 Gene3D G3DSA:3.40.50.10730 144 354 2.7E-92 T 22-04-2016 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 SUPERFAMILY SSF111326 10 560 1.57E-257 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 LK04_RS12560 0cb2a90c12f4abbad4974356a7c438d8 561 Pfam PF01175 Urocanase 13 552 4.3E-258 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 LK04_RS17355 2baad0f956f5416facb302ae00e3f8c6 294 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.005 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 LK04_RS17355 2baad0f956f5416facb302ae00e3f8c6 294 PANTHER PTHR11048 9 285 2.0E-92 T 22-04-2016 LK04_RS17355 2baad0f956f5416facb302ae00e3f8c6 294 Pfam PF01040 UbiA prenyltransferase family 28 270 3.4E-66 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 LK04_RS17355 2baad0f956f5416facb302ae00e3f8c6 294 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 286 5.9E-110 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 LK04_RS11380 c9a0269e56818ab699212ce82d0c5c57 252 Pfam PF00460 Flagella basal body rod protein 5 35 6.5E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LK04_RS11380 c9a0269e56818ab699212ce82d0c5c57 252 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 1.9E-32 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LK04_RS11380 c9a0269e56818ab699212ce82d0c5c57 252 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 8.4E-24 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LK04_RS11380 c9a0269e56818ab699212ce82d0c5c57 252 SUPERFAMILY SSF117143 77 209 3.27E-18 T 22-04-2016 LK04_RS11380 c9a0269e56818ab699212ce82d0c5c57 252 PANTHER PTHR30435 1 251 2.9E-107 T 22-04-2016 LK04_RS11380 c9a0269e56818ab699212ce82d0c5c57 252 PANTHER PTHR30435:SF18 1 251 2.9E-107 T 22-04-2016 LK04_RS11380 c9a0269e56818ab699212ce82d0c5c57 252 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site LK04_RS19465 0615e1caf00b42065a276f4b7cb058a4 320 PANTHER PTHR30160:SF8 1 310 5.8E-151 T 22-04-2016 LK04_RS19465 0615e1caf00b42065a276f4b7cb058a4 320 Gene3D G3DSA:3.40.50.2000 166 320 1.4E-36 T 22-04-2016 LK04_RS19465 0615e1caf00b42065a276f4b7cb058a4 320 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 314 2.3E-72 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 LK04_RS19465 0615e1caf00b42065a276f4b7cb058a4 320 Gene3D G3DSA:3.40.50.2000 1 159 1.2E-28 T 22-04-2016 LK04_RS19465 0615e1caf00b42065a276f4b7cb058a4 320 SUPERFAMILY SSF53756 1 320 4.08E-74 T 22-04-2016 LK04_RS19465 0615e1caf00b42065a276f4b7cb058a4 320 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 320 1.0E-126 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 LK04_RS19465 0615e1caf00b42065a276f4b7cb058a4 320 PANTHER PTHR30160 1 310 5.8E-151 T 22-04-2016 LK04_RS17250 f30187d9715e11edac35a041d89aa75b 317 PANTHER PTHR12715:SF21 1 312 7.9E-127 T 22-04-2016 LK04_RS17250 f30187d9715e11edac35a041d89aa75b 317 PANTHER PTHR12715 1 312 7.9E-127 T 22-04-2016 LK04_RS17250 f30187d9715e11edac35a041d89aa75b 317 Pfam PF00892 EamA-like transporter family 3 134 1.2E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LK04_RS17250 f30187d9715e11edac35a041d89aa75b 317 SUPERFAMILY SSF103481 40 137 1.44E-7 T 22-04-2016 LK04_RS11515 89ceca4b4571c8449607f6bbab660788 849 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 73 752 51.473 T 22-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 LK04_RS11515 89ceca4b4571c8449607f6bbab660788 849 SUPERFAMILY SSF53448 251 539 8.89E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS11515 89ceca4b4571c8449607f6bbab660788 849 PANTHER PTHR10587 156 425 8.1E-155 T 22-04-2016 LK04_RS11515 89ceca4b4571c8449607f6bbab660788 849 PANTHER PTHR10587 474 749 8.1E-155 T 22-04-2016 LK04_RS11515 89ceca4b4571c8449607f6bbab660788 849 Pfam PF00535 Glycosyl transferase family 2 253 435 3.5E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS11515 89ceca4b4571c8449607f6bbab660788 849 PANTHER PTHR10587:SF63 156 425 8.1E-155 T 22-04-2016 LK04_RS11515 89ceca4b4571c8449607f6bbab660788 849 PANTHER PTHR10587:SF63 474 749 8.1E-155 T 22-04-2016 LK04_RS11460 606755a33ecf597cc3de4ab51ef1cca7 81 SUPERFAMILY SSF54857 1 79 1.7E-25 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like LK04_RS11460 606755a33ecf597cc3de4ab51ef1cca7 81 PANTHER PTHR36572:SF2 1 81 1.2E-34 T 22-04-2016 LK04_RS11460 606755a33ecf597cc3de4ab51ef1cca7 81 PANTHER PTHR36572 1 81 1.2E-34 T 22-04-2016 LK04_RS11460 606755a33ecf597cc3de4ab51ef1cca7 81 Pfam PF06183 DinI-like family 14 78 2.5E-27 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like LK04_RS11460 606755a33ecf597cc3de4ab51ef1cca7 81 Gene3D G3DSA:3.30.910.10 1 80 2.2E-31 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like LK04_RS18665 fe70cd5d16a7181d2643c76d3cd0e89e 283 Gene3D G3DSA:1.10.10.60 225 268 8.9E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18665 fe70cd5d16a7181d2643c76d3cd0e89e 283 Gene3D G3DSA:1.10.10.60 166 224 3.8E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18665 fe70cd5d16a7181d2643c76d3cd0e89e 283 SMART SM00342 187 269 4.9E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS18665 fe70cd5d16a7181d2643c76d3cd0e89e 283 SUPERFAMILY SSF46689 170 221 2.24E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18665 fe70cd5d16a7181d2643c76d3cd0e89e 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 265 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LK04_RS18665 fe70cd5d16a7181d2643c76d3cd0e89e 283 SUPERFAMILY SSF51182 46 192 5.34E-7 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS18665 fe70cd5d16a7181d2643c76d3cd0e89e 283 SUPERFAMILY SSF46689 224 269 9.86E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS18665 fe70cd5d16a7181d2643c76d3cd0e89e 283 PANTHER PTHR11019 18 277 8.7E-50 T 22-04-2016 LK04_RS18665 fe70cd5d16a7181d2643c76d3cd0e89e 283 PANTHER PTHR11019:SF53 18 277 8.7E-50 T 22-04-2016 LK04_RS18665 fe70cd5d16a7181d2643c76d3cd0e89e 283 Pfam PF12833 Helix-turn-helix domain 193 269 3.0E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LK04_RS04775 8e3474cba7ebc4f0543398dae2954c12 396 PANTHER PTHR10590:SF13 4 394 6.5E-247 T 22-04-2016 LK04_RS04775 8e3474cba7ebc4f0543398dae2954c12 396 Pfam PF07670 Nucleoside recognition 92 190 3.0E-6 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 LK04_RS04775 8e3474cba7ebc4f0543398dae2954c12 396 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 392 4.6E-138 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 LK04_RS04775 8e3474cba7ebc4f0543398dae2954c12 396 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 4.3E-60 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 LK04_RS04775 8e3474cba7ebc4f0543398dae2954c12 396 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 1.4E-19 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 LK04_RS04775 8e3474cba7ebc4f0543398dae2954c12 396 PANTHER PTHR10590 4 394 6.5E-247 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 LK04_RS05110 0342d8100f54278ab623e54cd3504d3a 443 Pfam PF07157 DNA circularisation protein N-terminus 7 93 3.0E-38 T 22-04-2016 IPR009826 DNA circulation, N-terminal LK04_RS05110 0342d8100f54278ab623e54cd3504d3a 443 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 2 122 1.0E-44 T 22-04-2016 IPR009826 DNA circulation, N-terminal LK04_RS11940 a1d1989d5a39aea6b1181c3e6c548177 183 SUPERFAMILY SSF52218 1 168 6.45E-30 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS11940 a1d1989d5a39aea6b1181c3e6c548177 183 PANTHER PTHR30543:SF1 1 177 5.3E-46 T 22-04-2016 LK04_RS11940 a1d1989d5a39aea6b1181c3e6c548177 183 PANTHER PTHR30543 1 177 5.3E-46 T 22-04-2016 LK04_RS11940 a1d1989d5a39aea6b1181c3e6c548177 183 Pfam PF03358 NADPH-dependent FMN reductase 1 141 1.7E-31 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 LK04_RS11940 a1d1989d5a39aea6b1181c3e6c548177 183 Gene3D G3DSA:3.40.50.360 1 175 1.3E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS11940 a1d1989d5a39aea6b1181c3e6c548177 183 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 170 1.5E-68 T 22-04-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 LK04_RS09225 744632544baca223546c342245659eb1 190 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 18 173 2.6E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 LK04_RS09225 744632544baca223546c342245659eb1 190 PANTHER PTHR35850 13 186 6.9E-94 T 22-04-2016 LK04_RS09225 744632544baca223546c342245659eb1 190 PIRSF PIRSF028301 12 188 8.9E-60 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 LK04_RS09225 744632544baca223546c342245659eb1 190 PANTHER PTHR35850:SF1 13 186 6.9E-94 T 22-04-2016 LK04_RS09225 744632544baca223546c342245659eb1 190 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 22 172 2.9E-58 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 LK04_RS15550 aaa68b7f7a95b0ccfad9b023277937c2 330 SUPERFAMILY SSF53659 5 327 3.84E-118 T 22-04-2016 LK04_RS15550 aaa68b7f7a95b0ccfad9b023277937c2 330 Gene3D G3DSA:3.40.718.10 3 327 4.6E-139 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LK04_RS15550 aaa68b7f7a95b0ccfad9b023277937c2 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 5.3E-112 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 LK04_RS15550 aaa68b7f7a95b0ccfad9b023277937c2 330 PANTHER PTHR30004:SF5 1 330 5.6E-220 T 22-04-2016 LK04_RS15550 aaa68b7f7a95b0ccfad9b023277937c2 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 6.3E-134 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 LK04_RS15550 aaa68b7f7a95b0ccfad9b023277937c2 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 36.709 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 LK04_RS15550 aaa68b7f7a95b0ccfad9b023277937c2 330 PANTHER PTHR30004 1 330 5.6E-220 T 22-04-2016 LK04_RS14860 46d1443c2187f03e4cb70f810dfc87d9 234 PANTHER PTHR12818 1 234 2.5E-135 T 22-04-2016 LK04_RS14860 46d1443c2187f03e4cb70f810dfc87d9 234 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 149 8.5E-59 T 22-04-2016 IPR023370 TsaA-like domain LK04_RS14860 46d1443c2187f03e4cb70f810dfc87d9 234 Gene3D G3DSA:2.40.30.70 5 157 5.5E-53 T 22-04-2016 IPR023370 TsaA-like domain LK04_RS14860 46d1443c2187f03e4cb70f810dfc87d9 234 SUPERFAMILY SSF118196 2 228 1.7E-83 T 22-04-2016 IPR023370 TsaA-like domain LK04_RS14860 46d1443c2187f03e4cb70f810dfc87d9 234 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site LK04_RS14860 46d1443c2187f03e4cb70f810dfc87d9 234 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 2.7E-42 T 22-04-2016 IPR023370 TsaA-like domain LK04_RS14860 46d1443c2187f03e4cb70f810dfc87d9 234 PANTHER PTHR12818:SF6 1 234 2.5E-135 T 22-04-2016 LK04_RS01140 5c9325cecbd192418761dc8083c34e61 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.266 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LK04_RS01140 5c9325cecbd192418761dc8083c34e61 293 PANTHER PTHR18895:SF69 10 292 5.8E-172 T 22-04-2016 LK04_RS01140 5c9325cecbd192418761dc8083c34e61 293 Gene3D G3DSA:3.40.50.150 98 286 7.8E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS01140 5c9325cecbd192418761dc8083c34e61 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 2.9E-104 T 22-04-2016 LK04_RS01140 5c9325cecbd192418761dc8083c34e61 293 PIRSF PIRSF000401 1 293 4.1E-93 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LK04_RS01140 5c9325cecbd192418761dc8083c34e61 293 PANTHER PTHR18895 10 292 5.8E-172 T 22-04-2016 LK04_RS01140 5c9325cecbd192418761dc8083c34e61 293 SUPERFAMILY SSF53335 43 289 1.03E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS01140 5c9325cecbd192418761dc8083c34e61 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 6.4E-118 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LK04_RS12015 6d27da47df2afc15cd281209bf3d445e 440 Pfam PF03882 MukF winged-helix domain 3 117 2.8E-58 T 22-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain LK04_RS12015 6d27da47df2afc15cd281209bf3d445e 440 Pfam PF17193 MukF C-terminal domain 283 440 8.4E-79 T 22-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain LK04_RS12015 6d27da47df2afc15cd281209bf3d445e 440 PIRSF PIRSF018282 1 440 9.9E-244 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 LK04_RS12015 6d27da47df2afc15cd281209bf3d445e 440 SUPERFAMILY SSF46785 8 118 1.13E-48 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12015 6d27da47df2afc15cd281209bf3d445e 440 SUPERFAMILY SSF140570 119 281 4.58E-76 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain LK04_RS12015 6d27da47df2afc15cd281209bf3d445e 440 Gene3D G3DSA:1.10.10.10 24 118 1.7E-49 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS12015 6d27da47df2afc15cd281209bf3d445e 440 Pfam PF17192 MukF middle domain 121 281 8.2E-84 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain LK04_RS12015 6d27da47df2afc15cd281209bf3d445e 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.665 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 LK04_RS02190 dcbe8705168787278394b1528928dca1 234 Gene3D G3DSA:3.60.20.10 2 209 2.7E-15 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS02190 dcbe8705168787278394b1528928dca1 234 SUPERFAMILY SSF56235 2 230 4.89E-33 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS02190 dcbe8705168787278394b1528928dca1 234 PIRSF PIRSF009120 1 234 5.3E-101 T 22-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 LK04_RS02190 dcbe8705168787278394b1528928dca1 234 Pfam PF00227 Proteasome subunit 4 177 4.4E-8 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 LK04_RS11190 f0e31da2791917577d95d8b01ce45cd2 414 PANTHER PTHR30489 7 414 4.8E-83 T 22-04-2016 LK04_RS11190 f0e31da2791917577d95d8b01ce45cd2 414 Pfam PF02687 FtsX-like permease family 274 407 1.7E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LK04_RS11190 f0e31da2791917577d95d8b01ce45cd2 414 Pfam PF12704 MacB-like periplasmic core domain 27 240 9.7E-15 T 22-04-2016 IPR025857 MacB-like periplasmic core domain LK04_RS11190 f0e31da2791917577d95d8b01ce45cd2 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 2.0E-158 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 LK04_RS11190 f0e31da2791917577d95d8b01ce45cd2 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 1.4E-217 T 22-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 LK04_RS08055 4c7d60924253930f9706fa098ce47e74 301 PANTHER PTHR14226:SF24 1 299 3.6E-120 T 22-04-2016 LK04_RS08055 4c7d60924253930f9706fa098ce47e74 301 Pfam PF01734 Patatin-like phospholipase 8 165 1.5E-22 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 LK04_RS08055 4c7d60924253930f9706fa098ce47e74 301 SUPERFAMILY SSF52151 1 295 4.45E-56 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LK04_RS08055 4c7d60924253930f9706fa098ce47e74 301 PANTHER PTHR14226 1 299 3.6E-120 T 22-04-2016 LK04_RS08055 4c7d60924253930f9706fa098ce47e74 301 Gene3D G3DSA:3.40.1090.10 3 171 8.1E-6 T 22-04-2016 LK04_RS12960 85b70ac43fc089b2038e71d753d71c4a 350 PANTHER PTHR21225 1 349 1.5E-266 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS12960 85b70ac43fc089b2038e71d753d71c4a 350 Pfam PF00793 DAHP synthetase I family 39 337 1.1E-108 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LK04_RS12960 85b70ac43fc089b2038e71d753d71c4a 350 Gene3D G3DSA:3.20.20.70 9 349 1.5E-163 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS12960 85b70ac43fc089b2038e71d753d71c4a 350 SUPERFAMILY SSF51569 7 348 2.34E-142 T 22-04-2016 LK04_RS12960 85b70ac43fc089b2038e71d753d71c4a 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 6.1E-178 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS12960 85b70ac43fc089b2038e71d753d71c4a 350 PIRSF PIRSF001361 1 350 1.2E-166 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LK04_RS12960 85b70ac43fc089b2038e71d753d71c4a 350 PANTHER PTHR21225:SF7 1 349 1.5E-266 T 22-04-2016 LK04_RS02045 96f6073c484a97e1ada156ec1423d623 287 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 281 3.9E-88 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS02045 96f6073c484a97e1ada156ec1423d623 287 PANTHER PTHR30304 2 284 4.4E-82 T 22-04-2016 LK04_RS02045 96f6073c484a97e1ada156ec1423d623 287 Gene3D G3DSA:3.20.20.70 1 285 9.8E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS02045 96f6073c484a97e1ada156ec1423d623 287 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 282 1.7E-77 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS02045 96f6073c484a97e1ada156ec1423d623 287 SUPERFAMILY SSF51569 4 283 4.83E-89 T 22-04-2016 LK04_RS02045 96f6073c484a97e1ada156ec1423d623 287 PIRSF PIRSF001359 1 283 6.6E-90 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS16450 9f47ca2a865db7ab2953e829919e40cf 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 1.2E-40 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 LK04_RS16450 9f47ca2a865db7ab2953e829919e40cf 97 SUPERFAMILY SSF75471 1 95 5.1E-31 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LK04_RS16450 9f47ca2a865db7ab2953e829919e40cf 97 Gene3D G3DSA:3.30.110.60 1 94 1.3E-33 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LK04_RS16450 9f47ca2a865db7ab2953e829919e40cf 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 5.6E-22 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LK04_RS16450 9f47ca2a865db7ab2953e829919e40cf 97 SMART SM01103 3 86 3.4E-41 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LK04_RS16450 9f47ca2a865db7ab2953e829919e40cf 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 5.0E-32 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LK04_RS16450 9f47ca2a865db7ab2953e829919e40cf 97 PANTHER PTHR31846 1 97 7.7E-44 T 22-04-2016 LK04_RS08405 d1a83a09455dce0be871c7d65d8cf533 115 PANTHER PTHR33885 1 115 1.1E-29 T 22-04-2016 LK04_RS08405 d1a83a09455dce0be871c7d65d8cf533 115 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 5 114 5.2E-36 T 22-04-2016 IPR014320 Phage shock protein, PspC LK04_RS08405 d1a83a09455dce0be871c7d65d8cf533 115 Pfam PF04024 PspC domain 5 63 9.4E-15 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal LK04_RS01245 605465e281c17b22aa8ee85151cf6de3 89 SUPERFAMILY SSF52038 1 88 6.15E-22 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) LK04_RS01245 605465e281c17b22aa8ee85151cf6de3 89 Gene3D G3DSA:3.30.370.10 5 86 7.7E-11 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) LK04_RS18910 61a642466ca21bfae562555478283814 334 SUPERFAMILY SSF47413 2 57 1.41E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS18910 61a642466ca21bfae562555478283814 334 PANTHER PTHR30146 1 314 4.2E-58 T 22-04-2016 LK04_RS18910 61a642466ca21bfae562555478283814 334 Gene3D G3DSA:1.10.260.40 1 52 8.6E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS18910 61a642466ca21bfae562555478283814 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 311 2.8E-30 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LK04_RS18910 61a642466ca21bfae562555478283814 334 Gene3D G3DSA:3.40.50.2300 53 174 5.7E-25 T 22-04-2016 LK04_RS18910 61a642466ca21bfae562555478283814 334 SMART SM00354 1 70 6.3E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS18910 61a642466ca21bfae562555478283814 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 1.6E-9 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LK04_RS18910 61a642466ca21bfae562555478283814 334 SUPERFAMILY SSF53822 59 317 7.07E-31 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS18910 61a642466ca21bfae562555478283814 334 Gene3D G3DSA:3.40.50.2300 175 313 1.0E-18 T 22-04-2016 LK04_RS13400 a799a44869dff8f22b6d1a66f22fc28e 87 SUPERFAMILY SSF117991 1 87 6.54E-32 T 22-04-2016 IPR027471 YbeD-like domain LK04_RS13400 a799a44869dff8f22b6d1a66f22fc28e 87 PANTHER PTHR38036 1 87 1.2E-42 T 22-04-2016 LK04_RS13400 a799a44869dff8f22b6d1a66f22fc28e 87 PANTHER PTHR38036:SF1 1 87 1.2E-42 T 22-04-2016 LK04_RS13400 a799a44869dff8f22b6d1a66f22fc28e 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 9.9E-30 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 LK04_RS13400 a799a44869dff8f22b6d1a66f22fc28e 87 Gene3D G3DSA:3.30.70.1460 1 87 1.3E-37 T 22-04-2016 IPR027471 YbeD-like domain LK04_RS13400 a799a44869dff8f22b6d1a66f22fc28e 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.84 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 LK04_RS03230 54d79c3dfa91f13cbdb16efc59b02689 135 Pfam PF10713 Protein of unknown function (DUF2509) 14 133 5.6E-26 T 22-04-2016 IPR019652 Protein of unknown function DUF2509 LK04_RS01955 a5e562edd1cd3badc89b4858eef1fbdc 101 Pfam PF04380 Membrane fusogenic activity 1 77 3.4E-29 T 22-04-2016 IPR007475 Membrane fusogenic activity LK04_RS01955 a5e562edd1cd3badc89b4858eef1fbdc 101 PANTHER PTHR38040:SF1 2 95 5.3E-38 T 22-04-2016 LK04_RS01955 a5e562edd1cd3badc89b4858eef1fbdc 101 PANTHER PTHR38040 2 95 5.3E-38 T 22-04-2016 LK04_RS16310 306b421f8bde95ff0ff59e80115e4386 712 SUPERFAMILY SSF51998 121 687 1.71E-193 T 22-04-2016 LK04_RS16310 306b421f8bde95ff0ff59e80115e4386 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LK04_RS16310 306b421f8bde95ff0ff59e80115e4386 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.6E-178 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 LK04_RS16310 306b421f8bde95ff0ff59e80115e4386 712 Pfam PF03477 ATP cone domain 4 89 2.4E-18 T 22-04-2016 IPR005144 ATP-cone domain LK04_RS16310 306b421f8bde95ff0ff59e80115e4386 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 3.0E-199 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 LK04_RS16310 306b421f8bde95ff0ff59e80115e4386 712 PANTHER PTHR21075 1 711 6.6E-291 T 22-04-2016 LK04_RS16310 306b421f8bde95ff0ff59e80115e4386 712 Gene3D G3DSA:3.20.70.20 124 685 1.1E-181 T 22-04-2016 LK04_RS03150 77c14de637113011d3e4e6bbf2fa035d 419 SUPERFAMILY SSF111369 92 330 1.31E-54 T 22-04-2016 LK04_RS03150 77c14de637113011d3e4e6bbf2fa035d 419 Pfam PF13437 HlyD family secretion protein 214 316 1.1E-9 T 22-04-2016 LK04_RS03150 77c14de637113011d3e4e6bbf2fa035d 419 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 84 407 2.3E-71 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LK04_RS03150 77c14de637113011d3e4e6bbf2fa035d 419 PANTHER PTHR30469:SF12 83 418 2.4E-131 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA LK04_RS03150 77c14de637113011d3e4e6bbf2fa035d 419 Pfam PF13533 Biotin-lipoyl like 103 150 2.2E-13 T 22-04-2016 LK04_RS03150 77c14de637113011d3e4e6bbf2fa035d 419 Gene3D G3DSA:2.40.50.100 211 245 9.1E-23 T 22-04-2016 LK04_RS03150 77c14de637113011d3e4e6bbf2fa035d 419 Gene3D G3DSA:2.40.50.100 103 136 9.1E-23 T 22-04-2016 LK04_RS03150 77c14de637113011d3e4e6bbf2fa035d 419 PANTHER PTHR30469 83 418 2.4E-131 T 22-04-2016 LK04_RS03210 667e72d1a8716859bda29dd591e277b2 293 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 284 20.542 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 LK04_RS03210 667e72d1a8716859bda29dd591e277b2 293 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 288 1.7E-106 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 LK04_RS03210 667e72d1a8716859bda29dd591e277b2 293 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 LK04_RS03210 667e72d1a8716859bda29dd591e277b2 293 PANTHER PTHR30589 2 288 3.2E-132 T 22-04-2016 LK04_RS03210 667e72d1a8716859bda29dd591e277b2 293 PANTHER PTHR30589:SF0 2 288 3.2E-132 T 22-04-2016 LK04_RS03210 667e72d1a8716859bda29dd591e277b2 293 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 279 6.3E-78 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 SUPERFAMILY SSF53474 38 326 6.36E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 PANTHER PTHR10992 189 254 3.0E-55 T 22-04-2016 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 PANTHER PTHR10992 270 330 3.0E-55 T 22-04-2016 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 PANTHER PTHR10992 44 171 3.0E-55 T 22-04-2016 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 PANTHER PTHR10992:SF764 189 254 3.0E-55 T 22-04-2016 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 PANTHER PTHR10992:SF764 270 330 3.0E-55 T 22-04-2016 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 PANTHER PTHR10992:SF764 44 171 3.0E-55 T 22-04-2016 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 Pfam PF00561 alpha/beta hydrolase fold 59 189 8.6E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 PRINTS PR00412 Epoxide hydrolase signature 84 99 1.8E-11 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 PRINTS PR00412 Epoxide hydrolase signature 132 145 1.8E-11 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 PRINTS PR00412 Epoxide hydrolase signature 146 159 1.8E-11 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 PRINTS PR00412 Epoxide hydrolase signature 64 82 1.8E-11 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LK04_RS14485 482f6fe21027e5c2341981e9ccf41831 330 Gene3D G3DSA:3.40.50.1820 38 326 1.6E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS07865 fd8f0c4159001af8746c0b01356d5159 198 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 13 181 2.0E-60 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 LK04_RS07865 fd8f0c4159001af8746c0b01356d5159 198 Pfam PF03843 Outer membrane lipoprotein Slp family 19 167 2.3E-45 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 LK04_RS07865 fd8f0c4159001af8746c0b01356d5159 198 PIRSF PIRSF004982 5 189 5.3E-47 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 LK04_RS07865 fd8f0c4159001af8746c0b01356d5159 198 PANTHER PTHR37530 1 198 6.4E-52 T 22-04-2016 LK04_RS05525 fe78fb5b697650e2cd2e227c786ac7a0 180 SUPERFAMILY SSF54862 33 155 7.95E-29 T 22-04-2016 LK04_RS05525 fe78fb5b697650e2cd2e227c786ac7a0 180 Gene3D G3DSA:3.30.70.20 25 117 2.4E-18 T 22-04-2016 LK04_RS05525 fe78fb5b697650e2cd2e227c786ac7a0 180 PANTHER PTHR10849 8 180 2.5E-81 T 22-04-2016 LK04_RS05525 fe78fb5b697650e2cd2e227c786ac7a0 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 3.7E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LK04_RS05525 fe78fb5b697650e2cd2e227c786ac7a0 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS05525 fe78fb5b697650e2cd2e227c786ac7a0 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LK04_RS05525 fe78fb5b697650e2cd2e227c786ac7a0 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 1.6E-50 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 LK04_RS05525 fe78fb5b697650e2cd2e227c786ac7a0 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 147 26.982 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 LK04_RS05525 fe78fb5b697650e2cd2e227c786ac7a0 180 PANTHER PTHR10849:SF13 8 180 2.5E-81 T 22-04-2016 LK04_RS01590 04ae31cf4ed876cafabae19078d1bbe1 190 PANTHER PTHR34606:SF4 1 189 2.1E-89 T 22-04-2016 LK04_RS01590 04ae31cf4ed876cafabae19078d1bbe1 190 PANTHER PTHR34606 1 189 2.1E-89 T 22-04-2016 LK04_RS01590 04ae31cf4ed876cafabae19078d1bbe1 190 Pfam PF04972 BON domain 123 188 9.4E-18 T 22-04-2016 IPR007055 BON domain LK04_RS01590 04ae31cf4ed876cafabae19078d1bbe1 190 Pfam PF04972 BON domain 45 112 8.0E-14 T 22-04-2016 IPR007055 BON domain LK04_RS01590 04ae31cf4ed876cafabae19078d1bbe1 190 SMART SM00749 50 113 2.1E-11 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LK04_RS01590 04ae31cf4ed876cafabae19078d1bbe1 190 SMART SM00749 128 190 5.6E-6 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LK04_RS17385 20ce6d66d58ecfa018eaa4bf765e517b 282 PANTHER PTHR30193:SF20 4 282 1.2E-57 T 22-04-2016 LK04_RS17385 20ce6d66d58ecfa018eaa4bf765e517b 282 SUPERFAMILY SSF161098 3 274 7.85E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17385 20ce6d66d58ecfa018eaa4bf765e517b 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 273 9.9E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17385 20ce6d66d58ecfa018eaa4bf765e517b 282 PANTHER PTHR30193 4 282 1.2E-57 T 22-04-2016 LK04_RS17385 20ce6d66d58ecfa018eaa4bf765e517b 282 Gene3D G3DSA:1.10.3720.10 10 274 1.7E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 Pfam PF02050 Flagellar FliJ protein 19 141 8.5E-34 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 PANTHER PTHR38786 1 145 1.6E-42 T 22-04-2016 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 144 3.1E-30 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 PIRSF PIRSF019404 1 147 3.6E-48 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 PRINTS PR01004 Flagellar FliJ protein signature 126 146 1.4E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 PRINTS PR01004 Flagellar FliJ protein signature 108 126 1.4E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 PRINTS PR01004 Flagellar FliJ protein signature 63 84 1.4E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 PRINTS PR01004 Flagellar FliJ protein signature 86 107 1.4E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 PRINTS PR01004 Flagellar FliJ protein signature 27 43 1.4E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 PRINTS PR01004 Flagellar FliJ protein signature 4 26 1.4E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LK04_RS06935 d3ef76f1c2a9573f340380ecdc2bdb65 147 PRINTS PR01004 Flagellar FliJ protein signature 44 61 1.4E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LK04_RS04610 4e4d324b405c33cc46663f05a8f8f346 298 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 295 1.3E-84 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- LK04_RS04610 4e4d324b405c33cc46663f05a8f8f346 298 PANTHER PTHR30521 1 298 1.2E-119 T 22-04-2016 LK04_RS04610 4e4d324b405c33cc46663f05a8f8f346 298 SUPERFAMILY SSF54909 1 297 1.04E-90 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS04610 4e4d324b405c33cc46663f05a8f8f346 298 PANTHER PTHR30521:SF0 1 298 1.2E-119 T 22-04-2016 LK04_RS04610 4e4d324b405c33cc46663f05a8f8f346 298 Pfam PF04261 Dyp-type peroxidase family 6 293 2.1E-88 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- LK04_RS13615 3dee40b76a6f6365541a4cb6adb5b842 117 Gene3D G3DSA:1.10.1200.10 5 55 1.1E-4 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS07470 804f1d89aad520bcc1dc95705415824f 212 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 4.6E-86 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LK04_RS07470 804f1d89aad520bcc1dc95705415824f 212 Gene3D G3DSA:3.20.20.70 2 210 1.7E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS07470 804f1d89aad520bcc1dc95705415824f 212 SUPERFAMILY SSF51569 3 209 2.75E-70 T 22-04-2016 LK04_RS07470 804f1d89aad520bcc1dc95705415824f 212 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 LK04_RS07470 804f1d89aad520bcc1dc95705415824f 212 PANTHER PTHR30246 1 212 1.5E-132 T 22-04-2016 LK04_RS07470 804f1d89aad520bcc1dc95705415824f 212 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LK04_RS07470 804f1d89aad520bcc1dc95705415824f 212 Pfam PF01081 KDPG and KHG aldolase 9 203 2.9E-90 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LK04_RS07470 804f1d89aad520bcc1dc95705415824f 212 PANTHER PTHR30246:SF0 1 212 1.5E-132 T 22-04-2016 LK04_RS01690 915ef5d6bf9f7667876ad8682f5d0aaa 496 Pfam PF08666 SAF domain 11 80 3.0E-9 T 22-04-2016 IPR013974 SAF domain LK04_RS01690 915ef5d6bf9f7667876ad8682f5d0aaa 496 PANTHER PTHR30536 1 496 1.4E-263 T 22-04-2016 LK04_RS01690 915ef5d6bf9f7667876ad8682f5d0aaa 496 PANTHER PTHR30536:SF5 1 496 1.4E-263 T 22-04-2016 LK04_RS01690 915ef5d6bf9f7667876ad8682f5d0aaa 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 495 2.8E-156 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 LK04_RS01690 915ef5d6bf9f7667876ad8682f5d0aaa 496 SMART SM00858 11 82 3.7E-12 T 22-04-2016 IPR013974 SAF domain LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 Gene3D G3DSA:3.40.50.1370 145 292 4.0E-53 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.6E-117 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 SUPERFAMILY SSF53671 4 306 1.01E-98 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 Gene3D G3DSA:3.40.50.1370 8 144 2.4E-51 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.3E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.3E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.3E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.3E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.3E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.3E-34 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PANTHER PTHR11405:SF16 1 305 4.0E-143 T 22-04-2016 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PANTHER PTHR11405 1 305 4.0E-143 T 22-04-2016 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.6E-26 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.4E-44 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.3E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.3E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.3E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.3E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LK04_RS16290 b1fb01c83cf626069711f8aa633a30d6 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 37.732 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LK04_RS14720 5bc2f75a033f596975db75207418e291 528 SUPERFAMILY SSF56235 6 528 2.32E-152 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS14720 5bc2f75a033f596975db75207418e291 528 Pfam PF01019 Gamma-glutamyltranspeptidase 25 523 1.4E-133 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS14720 5bc2f75a033f596975db75207418e291 528 PANTHER PTHR11686 10 528 6.7E-159 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS14720 5bc2f75a033f596975db75207418e291 528 PANTHER PTHR11686:SF8 10 528 6.7E-159 T 22-04-2016 LK04_RS14720 5bc2f75a033f596975db75207418e291 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 143 5.9E-21 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS14720 5bc2f75a033f596975db75207418e291 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 397 412 5.9E-21 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS14720 5bc2f75a033f596975db75207418e291 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 366 384 5.9E-21 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS14720 5bc2f75a033f596975db75207418e291 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 5.9E-21 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS14720 5bc2f75a033f596975db75207418e291 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 222 238 5.9E-21 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS14720 5bc2f75a033f596975db75207418e291 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 270 5.9E-21 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS14720 5bc2f75a033f596975db75207418e291 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 342 360 5.9E-21 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LK04_RS14115 38d317ad782eef56b86a2a3408aee297 149 PANTHER PTHR30455:SF2 2 149 2.5E-74 T 22-04-2016 LK04_RS14115 38d317ad782eef56b86a2a3408aee297 149 Pfam PF03477 ATP cone domain 50 136 2.6E-14 T 22-04-2016 IPR005144 ATP-cone domain LK04_RS14115 38d317ad782eef56b86a2a3408aee297 149 PANTHER PTHR30455 2 149 2.5E-74 T 22-04-2016 LK04_RS14115 38d317ad782eef56b86a2a3408aee297 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.048 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 LK04_RS14115 38d317ad782eef56b86a2a3408aee297 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.8E-76 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 LK04_RS03080 4804ec82dfd7a2f9303faaace1bf2ad4 221 Gene3D G3DSA:1.10.3720.10 10 213 5.5E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03080 4804ec82dfd7a2f9303faaace1bf2ad4 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 213 1.6E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03080 4804ec82dfd7a2f9303faaace1bf2ad4 221 PANTHER PTHR30614 1 218 3.3E-68 T 22-04-2016 LK04_RS03080 4804ec82dfd7a2f9303faaace1bf2ad4 221 SUPERFAMILY SSF161098 12 207 1.96E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03080 4804ec82dfd7a2f9303faaace1bf2ad4 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 3.0E-18 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS13625 732fd756242aff2d00e2c4c64ad35eb8 290 Pfam PF13391 HNH endonuclease 182 236 6.8E-8 T 22-04-2016 IPR003615 HNH nuclease LK04_RS13625 732fd756242aff2d00e2c4c64ad35eb8 290 PIRSF PIRSF030850 1 290 9.1E-118 T 22-04-2016 IPR011396 Uncharacterised conserved protein UCP030850 LK04_RS17480 bcc186896be77896d20e4f98ac234155 423 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 397 3.3E-54 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS17480 bcc186896be77896d20e4f98ac234155 423 Pfam PF11862 Domain of unknown function (DUF3382) 6 102 1.1E-24 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal LK04_RS17480 bcc186896be77896d20e4f98ac234155 423 PANTHER PTHR30482:SF9 59 417 3.9E-202 T 22-04-2016 LK04_RS17480 bcc186896be77896d20e4f98ac234155 423 PANTHER PTHR30482 59 417 3.9E-202 T 22-04-2016 LK04_RS05055 6c303d70d6ce7ddedede203184a2c3b2 282 SUPERFAMILY SSF52096 41 208 2.41E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS05055 6c303d70d6ce7ddedede203184a2c3b2 282 Gene3D G3DSA:3.90.226.10 66 208 1.4E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LK04_RS05055 6c303d70d6ce7ddedede203184a2c3b2 282 PANTHER PTHR10381 44 210 1.5E-51 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LK04_RS05055 6c303d70d6ce7ddedede203184a2c3b2 282 Pfam PF00574 Clp protease 74 204 3.8E-26 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LK04_RS05055 6c303d70d6ce7ddedede203184a2c3b2 282 PRINTS PR00127 Clp protease catalytic subunit P signature 75 95 5.3E-11 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LK04_RS05055 6c303d70d6ce7ddedede203184a2c3b2 282 PRINTS PR00127 Clp protease catalytic subunit P signature 106 123 5.3E-11 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LK04_RS05055 6c303d70d6ce7ddedede203184a2c3b2 282 PRINTS PR00127 Clp protease catalytic subunit P signature 182 201 5.3E-11 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LK04_RS05055 6c303d70d6ce7ddedede203184a2c3b2 282 PANTHER PTHR10381:SF23 44 210 1.5E-51 T 22-04-2016 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 SMART SM01130 6 294 5.7E-66 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 PIRSF PIRSF001365 3 295 6.1E-62 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 PANTHER PTHR12128 3 266 2.3E-72 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 Gene3D G3DSA:3.20.20.70 3 294 1.2E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 7.8E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 7.8E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 7.8E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 7.8E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 SUPERFAMILY SSF51569 9 293 5.34E-67 T 22-04-2016 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 167 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LK04_RS03555 773f7381f6718f89db7b8cfe1c70c88c 295 Pfam PF00701 Dihydrodipicolinate synthetase family 7 266 2.4E-52 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LK04_RS04230 84ec232bdc68ec4ac1e3cbfdea82d137 60 PANTHER PTHR36569 6 53 1.1E-17 T 22-04-2016 LK04_RS04230 84ec232bdc68ec4ac1e3cbfdea82d137 60 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 12 32 1.4E-6 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat LK04_RS04230 84ec232bdc68ec4ac1e3cbfdea82d137 60 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 34 53 2.0E-9 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat LK04_RS03395 e9ad75f7a059138a9652c5ee03e3569c 379 PANTHER PTHR21599 1 377 3.3E-242 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LK04_RS03395 e9ad75f7a059138a9652c5ee03e3569c 379 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 1.4E-164 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LK04_RS03395 e9ad75f7a059138a9652c5ee03e3569c 379 SUPERFAMILY SSF110738 1 374 1.44E-141 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LK04_RS03395 e9ad75f7a059138a9652c5ee03e3569c 379 Pfam PF02595 Glycerate kinase family 3 374 1.9E-149 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LK04_RS03395 e9ad75f7a059138a9652c5ee03e3569c 379 PIRSF PIRSF006078 1 377 2.4E-139 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LK04_RS03395 e9ad75f7a059138a9652c5ee03e3569c 379 PANTHER PTHR21599:SF4 1 377 3.3E-242 T 22-04-2016 LK04_RS03395 e9ad75f7a059138a9652c5ee03e3569c 379 Gene3D G3DSA:3.90.1510.10 42 275 2.3E-99 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 LK04_RS18900 2f8bb2e814653035ef4237106eaa949d 249 Gene3D G3DSA:3.20.20.150 3 248 1.4E-76 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS18900 2f8bb2e814653035ef4237106eaa949d 249 SUPERFAMILY SSF51658 4 247 3.15E-53 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 SUPERFAMILY SSF55594 1 82 1.13E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 PANTHER PTHR33705:SF1 1 84 1.2E-40 T 22-04-2016 LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.8E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 PANTHER PTHR33705 1 84 1.2E-40 T 22-04-2016 LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 Gene3D G3DSA:3.30.1340.10 1 83 8.5E-34 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS04660 e42e8b8415878c1cc5d2ccc256a7a5a2 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 4.7E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LK04_RS15410 da68a6e19575ae6cb673903781b60b7a 404 PANTHER PTHR30474 14 404 1.3E-189 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LK04_RS15410 da68a6e19575ae6cb673903781b60b7a 404 PANTHER PTHR30474:SF2 14 404 1.3E-189 T 22-04-2016 LK04_RS15410 da68a6e19575ae6cb673903781b60b7a 404 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 35 390 5.1E-136 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 LK04_RS15410 da68a6e19575ae6cb673903781b60b7a 404 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 33 400 42.271 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 LK04_RS15410 da68a6e19575ae6cb673903781b60b7a 404 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 349 373 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 LK04_RS15410 da68a6e19575ae6cb673903781b60b7a 404 Pfam PF01098 Cell cycle protein 37 392 1.4E-124 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LK04_RS08610 ad83799bfc419896bc7ac98cdcd366d3 388 PANTHER PTHR11751 15 386 5.6E-121 T 22-04-2016 LK04_RS08610 ad83799bfc419896bc7ac98cdcd366d3 388 Pfam PF00155 Aminotransferase class I and II 33 383 5.2E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LK04_RS08610 ad83799bfc419896bc7ac98cdcd366d3 388 PANTHER PTHR11751:SF301 15 386 5.6E-121 T 22-04-2016 LK04_RS08610 ad83799bfc419896bc7ac98cdcd366d3 388 SUPERFAMILY SSF53383 10 385 1.86E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LK04_RS08610 ad83799bfc419896bc7ac98cdcd366d3 388 Gene3D G3DSA:3.40.640.10 46 274 8.4E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LK04_RS08610 ad83799bfc419896bc7ac98cdcd366d3 388 Gene3D G3DSA:3.90.1150.10 275 383 2.8E-14 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LK04_RS00065 62902ac426d7751fbc457558f3a42e47 508 PANTHER PTHR22935 6 340 3.8E-24 T 22-04-2016 LK04_RS00065 62902ac426d7751fbc457558f3a42e47 508 Gene3D G3DSA:3.40.710.10 20 335 3.1E-54 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS00065 62902ac426d7751fbc457558f3a42e47 508 SUPERFAMILY SSF56601 10 331 6.66E-51 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LK04_RS00065 62902ac426d7751fbc457558f3a42e47 508 Pfam PF00144 Beta-lactamase 12 322 4.8E-38 T 22-04-2016 IPR001466 Beta-lactamase-related LK04_RS02750 8c33edcdbb7c60e884d7b1f06bb98780 170 Hamap MF_00746 Protein SprT [sprT]. 12 165 39.619 T 22-04-2016 IPR023483 Uncharacterised protein family SprT LK04_RS02750 8c33edcdbb7c60e884d7b1f06bb98780 170 PANTHER PTHR38773 2 170 6.3E-87 T 22-04-2016 LK04_RS02750 8c33edcdbb7c60e884d7b1f06bb98780 170 Pfam PF10263 SprT-like family 19 162 3.9E-28 T 22-04-2016 IPR006640 SprT-like LK04_RS02750 8c33edcdbb7c60e884d7b1f06bb98780 170 SMART SM00731 16 165 2.5E-55 T 22-04-2016 IPR006640 SprT-like LK04_RS01430 be3523f1fae6119d3d55917158716a21 178 Pfam PF04225 Opacity-associated protein A LysM-like domain 94 177 2.6E-35 T 22-04-2016 IPR007340 Opacity-associated protein A LK04_RS01430 be3523f1fae6119d3d55917158716a21 178 Pfam PF08525 Opacity-associated protein A N-terminal motif 25 52 8.2E-10 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal LK04_RS02365 bca955d9bc5355a2de457d5d62b3ef73 154 Gene3D G3DSA:2.60.40.1090 22 154 1.4E-7 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LK04_RS02365 bca955d9bc5355a2de457d5d62b3ef73 154 SUPERFAMILY SSF49401 30 154 2.24E-19 T 22-04-2016 IPR008966 Adhesion domain LK04_RS02365 bca955d9bc5355a2de457d5d62b3ef73 154 Pfam PF00419 Fimbrial protein 25 154 1.6E-16 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LK04_RS09075 bcd96cf2e6fc96e0abbcbe0bac41d5b8 303 SUPERFAMILY SSF161098 64 291 2.35E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09075 bcd96cf2e6fc96e0abbcbe0bac41d5b8 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 299 3.1E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09075 bcd96cf2e6fc96e0abbcbe0bac41d5b8 303 Gene3D G3DSA:1.10.3720.10 19 291 5.0E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS09075 bcd96cf2e6fc96e0abbcbe0bac41d5b8 303 PANTHER PTHR30193:SF6 17 303 2.7E-81 T 22-04-2016 LK04_RS09075 bcd96cf2e6fc96e0abbcbe0bac41d5b8 303 PANTHER PTHR30193 17 303 2.7E-81 T 22-04-2016 LK04_RS05445 7c85c6c0fea8dede8e8f26e7a9da6f28 177 SUPERFAMILY SSF55811 11 166 1.62E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS05445 7c85c6c0fea8dede8e8f26e7a9da6f28 177 PANTHER PTHR22769 1 171 1.5E-113 T 22-04-2016 LK04_RS05445 7c85c6c0fea8dede8e8f26e7a9da6f28 177 Pfam PF00293 NUDIX domain 37 150 3.3E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS05445 7c85c6c0fea8dede8e8f26e7a9da6f28 177 PIRSF PIRSF017340 2 172 5.4E-64 T 22-04-2016 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 LK04_RS05445 7c85c6c0fea8dede8e8f26e7a9da6f28 177 Gene3D G3DSA:3.90.79.10 7 173 8.6E-61 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS05445 7c85c6c0fea8dede8e8f26e7a9da6f28 177 PANTHER PTHR22769:SF25 1 171 1.5E-113 T 22-04-2016 LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 SUPERFAMILY SSF52540 248 482 4.19E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 Gene3D G3DSA:3.40.50.300 2 235 1.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 SMART SM00382 277 472 2.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 SMART SM00382 29 219 2.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 PANTHER PTHR24220:SF416 6 378 1.6E-207 T 22-04-2016 LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 Pfam PF00005 ABC transporter 269 423 6.6E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 Pfam PF00005 ABC transporter 20 169 9.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 Gene3D G3DSA:3.40.50.300 262 491 8.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 PANTHER PTHR24220 6 378 1.6E-207 T 22-04-2016 LK04_RS19105 acbec08eab3d38051380a10179f831c3 502 SUPERFAMILY SSF52540 3 230 4.22E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00455 5d0b569186efe911a74426003dd8209a 272 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 17 263 2.0E-99 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 LK04_RS00455 5d0b569186efe911a74426003dd8209a 272 PANTHER PTHR39193:SF1 1 265 2.6E-125 T 22-04-2016 LK04_RS00455 5d0b569186efe911a74426003dd8209a 272 SUPERFAMILY SSF51182 14 252 3.25E-68 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS00455 5d0b569186efe911a74426003dd8209a 272 Gene3D G3DSA:2.60.120.10 15 120 4.8E-45 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS00455 5d0b569186efe911a74426003dd8209a 272 Gene3D G3DSA:2.60.120.10 121 266 4.6E-68 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS00455 5d0b569186efe911a74426003dd8209a 272 Pfam PF04962 KduI/IolB family 6 263 5.4E-108 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 LK04_RS00455 5d0b569186efe911a74426003dd8209a 272 PANTHER PTHR39193 1 265 2.6E-125 T 22-04-2016 LK04_RS00455 5d0b569186efe911a74426003dd8209a 272 PIRSF PIRSF036628 1 269 2.5E-109 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 LK04_RS06610 18afdbc80d7120c5ccf3d6afd817af9d 148 Pfam PF00583 Acetyltransferase (GNAT) family 64 134 8.0E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS06610 18afdbc80d7120c5ccf3d6afd817af9d 148 Gene3D G3DSA:3.40.630.30 23 141 2.2E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS06610 18afdbc80d7120c5ccf3d6afd817af9d 148 SUPERFAMILY SSF55729 34 137 4.18E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS09405 d8d13e4eeafe1bcc8491ae2a6c6b2e64 371 Gene3D G3DSA:3.40.50.1980 37 176 2.1E-18 T 22-04-2016 LK04_RS09405 d8d13e4eeafe1bcc8491ae2a6c6b2e64 371 Gene3D G3DSA:3.40.50.1980 180 335 6.6E-28 T 22-04-2016 LK04_RS09405 d8d13e4eeafe1bcc8491ae2a6c6b2e64 371 PANTHER PTHR30535 10 368 2.2E-69 T 22-04-2016 LK04_RS09405 d8d13e4eeafe1bcc8491ae2a6c6b2e64 371 PANTHER PTHR30535:SF5 10 368 2.2E-69 T 22-04-2016 LK04_RS09405 d8d13e4eeafe1bcc8491ae2a6c6b2e64 371 SUPERFAMILY SSF53807 21 337 6.67E-49 T 22-04-2016 LK04_RS09405 d8d13e4eeafe1bcc8491ae2a6c6b2e64 371 Pfam PF01497 Periplasmic binding protein 75 310 1.9E-23 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LK04_RS02895 1a7eda439cc279be0c347adc05fe7661 207 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 206 38.258 T 22-04-2016 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 LK04_RS02895 1a7eda439cc279be0c347adc05fe7661 207 PANTHER PTHR30086 1 207 6.2E-95 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS02895 1a7eda439cc279be0c347adc05fe7661 207 PANTHER PTHR30086:SF0 1 207 6.2E-95 T 22-04-2016 LK04_RS02895 1a7eda439cc279be0c347adc05fe7661 207 Pfam PF01810 LysE type translocator 14 203 1.6E-50 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS02895 1a7eda439cc279be0c347adc05fe7661 207 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 192 3.4E-65 T 22-04-2016 IPR004777 L-lysine exporter/arginine exporter GO:0016021 LK04_RS07960 07fb9ed93cbccc1817497e035a081711 644 PANTHER PTHR30267 1 644 1.8E-301 T 22-04-2016 LK04_RS07960 07fb9ed93cbccc1817497e035a081711 644 SMART SM00763 19 380 5.8E-215 T 22-04-2016 IPR013153 PrkA AAA domain LK04_RS07960 07fb9ed93cbccc1817497e035a081711 644 Pfam PF08298 PrkA AAA domain 20 380 8.1E-177 T 22-04-2016 IPR013153 PrkA AAA domain LK04_RS07960 07fb9ed93cbccc1817497e035a081711 644 PANTHER PTHR30267:SF2 1 644 1.8E-301 T 22-04-2016 LK04_RS07960 07fb9ed93cbccc1817497e035a081711 644 PIRSF PIRSF000549 1 644 5.4E-289 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 LK04_RS07960 07fb9ed93cbccc1817497e035a081711 644 SUPERFAMILY SSF52540 75 145 8.73E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07960 07fb9ed93cbccc1817497e035a081711 644 SUPERFAMILY SSF52540 246 368 8.73E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07960 07fb9ed93cbccc1817497e035a081711 644 Gene3D G3DSA:3.40.50.300 75 170 3.5E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07960 07fb9ed93cbccc1817497e035a081711 644 Gene3D G3DSA:3.40.50.300 243 329 3.5E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS07960 07fb9ed93cbccc1817497e035a081711 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 9.5E-74 T 22-04-2016 IPR010650 PrkA C-terminal domain LK04_RS03060 3e190403252346f7b4f902e8149a905c 278 Gene3D G3DSA:3.40.190.10 225 267 5.7E-33 T 22-04-2016 LK04_RS03060 3e190403252346f7b4f902e8149a905c 278 Gene3D G3DSA:3.40.190.10 30 110 5.7E-33 T 22-04-2016 LK04_RS03060 3e190403252346f7b4f902e8149a905c 278 PANTHER PTHR18966:SF191 20 261 3.9E-27 T 22-04-2016 LK04_RS03060 3e190403252346f7b4f902e8149a905c 278 Gene3D G3DSA:3.40.190.10 111 221 1.4E-13 T 22-04-2016 LK04_RS03060 3e190403252346f7b4f902e8149a905c 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 264 4.5E-48 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS03060 3e190403252346f7b4f902e8149a905c 278 PANTHER PTHR18966 20 261 3.9E-27 T 22-04-2016 LK04_RS03060 3e190403252346f7b4f902e8149a905c 278 SUPERFAMILY SSF53850 1 265 1.78E-55 T 22-04-2016 LK04_RS03060 3e190403252346f7b4f902e8149a905c 278 SMART SM00062 33 266 1.3E-50 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS00920 0be876d4988552b0e083724440dcaf9b 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 4.8E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LK04_RS00920 0be876d4988552b0e083724440dcaf9b 123 PANTHER PTHR11761 1 123 3.3E-79 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LK04_RS00920 0be876d4988552b0e083724440dcaf9b 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.1E-59 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 LK04_RS00920 0be876d4988552b0e083724440dcaf9b 123 SMART SM01374 1 123 6.6E-87 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LK04_RS00920 0be876d4988552b0e083724440dcaf9b 123 Gene3D G3DSA:2.40.150.20 1 123 4.9E-56 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LK04_RS00920 0be876d4988552b0e083724440dcaf9b 123 SUPERFAMILY SSF50193 2 122 1.57E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LK04_RS00920 0be876d4988552b0e083724440dcaf9b 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.078 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LK04_RS00920 0be876d4988552b0e083724440dcaf9b 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site LK04_RS07505 9dccd3079f103a879c6679b87aabefec 293 Pfam PF05425 Copper resistance protein D 188 286 4.3E-18 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 LK04_RS07505 9dccd3079f103a879c6679b87aabefec 293 PANTHER PTHR34820 1 292 9.1E-51 T 22-04-2016 LK04_RS07650 4b48831c3078e25015a91ae0222104dc 340 Pfam PF04860 Phage portal protein 91 328 3.4E-16 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein LK04_RS07650 4b48831c3078e25015a91ae0222104dc 340 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 53 333 1.4E-82 T 22-04-2016 IPR006430 Phage portal protein PBSX family LK04_RS07650 4b48831c3078e25015a91ae0222104dc 340 PIRSF PIRSF018494 1 340 7.1E-155 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 Gene3D G3DSA:3.40.47.10 272 419 1.9E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 255 6.9E-58 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 263 375 4.9E-34 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 162 178 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 417 9.8E-165 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 PANTHER PTHR11712 1 417 1.8E-176 T 22-04-2016 LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 PANTHER PTHR11712:SF273 1 417 1.8E-176 T 22-04-2016 LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 PIRSF PIRSF000447 1 420 3.2E-160 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 SUPERFAMILY SSF53901 1 260 6.26E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 Gene3D G3DSA:3.40.47.10 1 268 3.5E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 SUPERFAMILY SSF53901 223 419 2.88E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LK04_RS02495 64574ca8461cad3c8f788c5a2d62c1b0 420 SMART SM00825 Beta-ketoacyl synthase 4 419 1.4E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 Gene3D G3DSA:1.10.150.240 21 91 1.3E-34 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 5.7E-26 T 22-04-2016 IPR023214 HAD-like domain LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 PANTHER PTHR18901 1 216 3.0E-73 T 22-04-2016 LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 Gene3D G3DSA:3.40.50.1000 4 20 9.7E-39 T 22-04-2016 IPR023214 HAD-like domain LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 Gene3D G3DSA:3.40.50.1000 95 218 9.7E-39 T 22-04-2016 IPR023214 HAD-like domain LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 191 6.1E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 1.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 SUPERFAMILY SSF56784 9 216 3.31E-51 T 22-04-2016 IPR023214 HAD-like domain LK04_RS10500 0b449abd3211288e3eedad522c1ccfcc 222 PANTHER PTHR18901:SF34 1 216 3.0E-73 T 22-04-2016 LK04_RS04070 634458bce8c1c85791a98e7e6495aded 175 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 21 162 46.955 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 LK04_RS04070 634458bce8c1c85791a98e7e6495aded 175 SUPERFAMILY SSF53927 13 166 1.02E-58 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LK04_RS04070 634458bce8c1c85791a98e7e6495aded 175 PANTHER PTHR11079 15 165 5.9E-51 T 22-04-2016 LK04_RS04070 634458bce8c1c85791a98e7e6495aded 175 Gene3D G3DSA:3.40.140.10 13 160 1.1E-60 T 22-04-2016 LK04_RS04070 634458bce8c1c85791a98e7e6495aded 175 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 66 103 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LK04_RS04070 634458bce8c1c85791a98e7e6495aded 175 Pfam PF14437 MafB19-like deaminase 16 162 3.6E-33 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 LK04_RS07735 696fab21d06cd3c0077eade0cbe8d5a8 877 Pfam PF02470 MlaD protein 633 722 5.8E-11 T 22-04-2016 IPR003399 Mce/MlaD LK04_RS07735 696fab21d06cd3c0077eade0cbe8d5a8 877 Pfam PF02470 MlaD protein 746 806 4.8E-9 T 22-04-2016 IPR003399 Mce/MlaD LK04_RS07735 696fab21d06cd3c0077eade0cbe8d5a8 877 Pfam PF02470 MlaD protein 46 137 6.1E-14 T 22-04-2016 IPR003399 Mce/MlaD LK04_RS07735 696fab21d06cd3c0077eade0cbe8d5a8 877 Pfam PF02470 MlaD protein 163 220 4.3E-6 T 22-04-2016 IPR003399 Mce/MlaD LK04_RS07735 696fab21d06cd3c0077eade0cbe8d5a8 877 PANTHER PTHR30462:SF0 1 875 0.0 T 22-04-2016 LK04_RS07735 696fab21d06cd3c0077eade0cbe8d5a8 877 PANTHER PTHR30462 1 875 0.0 T 22-04-2016 LK04_RS17525 9cb2c82cb6baf76a392221f6e823f60c 89 PANTHER PTHR38775:SF1 1 85 9.8E-25 T 22-04-2016 LK04_RS17525 9cb2c82cb6baf76a392221f6e823f60c 89 Pfam PF06611 Protein of unknown function (DUF1145) 1 57 1.9E-25 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 LK04_RS17525 9cb2c82cb6baf76a392221f6e823f60c 89 PANTHER PTHR38775 1 85 9.8E-25 T 22-04-2016 LK04_RS14335 074d4add15f414ba80441288d3d80bfe 99 Pfam PF11720 Peptidase inhibitor I78 family 40 99 4.8E-12 T 22-04-2016 IPR021719 Proteinase inhibitor I78 LK04_RS10045 f097e01ee1781204457cb505f0d72e81 346 PANTHER PTHR22604:SF53 1 346 4.8E-138 T 22-04-2016 LK04_RS10045 f097e01ee1781204457cb505f0d72e81 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 1.6E-11 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LK04_RS10045 f097e01ee1781204457cb505f0d72e81 346 SUPERFAMILY SSF51735 2 191 1.69E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10045 f097e01ee1781204457cb505f0d72e81 346 PANTHER PTHR22604 1 346 4.8E-138 T 22-04-2016 LK04_RS10045 f097e01ee1781204457cb505f0d72e81 346 Gene3D G3DSA:3.40.50.720 1 129 1.2E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS10045 f097e01ee1781204457cb505f0d72e81 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.2E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS10045 f097e01ee1781204457cb505f0d72e81 346 Gene3D G3DSA:3.30.360.10 130 340 1.1E-36 T 22-04-2016 LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 321 8.8E-115 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 SUPERFAMILY SSF101801 249 323 8.89E-13 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 PANTHER PTHR30034:SF0 2 335 6.8E-150 T 22-04-2016 LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 PIRSF PIRSF002888 2 331 2.9E-97 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 SUPERFAMILY SSF103039 49 231 2.62E-19 T 22-04-2016 IPR028976 CheC-like domain LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 PANTHER PTHR30034 2 335 6.8E-150 T 22-04-2016 LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 9.9E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 9.9E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 9.9E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 9.9E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 321 2.2E-16 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 Gene3D G3DSA:2.30.330.10 242 323 1.4E-6 T 22-04-2016 LK04_RS06920 30de165fa274fa96170964e0098c03b7 335 Pfam PF02154 Flagellar motor switch protein FliM 38 231 3.7E-78 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LK04_RS13345 d5c810fed66ae104987bb903046bc06d 160 Pfam PF07295 Zinc-ribbon containing domain 15 157 1.5E-49 T 22-04-2016 IPR009912 Zinc-ribbon containing domain LK04_RS17425 1c453b7f23b6c5d14ec18fa793b2838a 523 PANTHER PTHR30282:SF0 1 523 1.5E-259 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 LK04_RS17425 1c453b7f23b6c5d14ec18fa793b2838a 523 PANTHER PTHR30282 1 523 1.5E-259 T 22-04-2016 LK04_RS17425 1c453b7f23b6c5d14ec18fa793b2838a 523 Pfam PF03806 AbgT putative transporter family 15 521 8.2E-217 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 LK04_RS13440 666bf2033413b8cc7048c3d936e4e800 319 SUPERFAMILY SSF53850 160 307 3.47E-18 T 22-04-2016 LK04_RS13440 666bf2033413b8cc7048c3d936e4e800 319 SUPERFAMILY SSF53850 3 130 3.47E-18 T 22-04-2016 LK04_RS13440 666bf2033413b8cc7048c3d936e4e800 319 Pfam PF09084 NMT1/THI5 like 83 129 8.9E-5 T 22-04-2016 IPR015168 SsuA/THI5-like LK04_RS13440 666bf2033413b8cc7048c3d936e4e800 319 Gene3D G3DSA:3.40.190.10 84 235 1.0E-14 T 22-04-2016 LK04_RS05075 2e4ad7ed35e33d523753161dc7ed7eaf 129 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 20 117 4.3E-9 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor LK04_RS05075 2e4ad7ed35e33d523753161dc7ed7eaf 129 Pfam PF05521 Phage head-tail joining protein 21 115 1.1E-14 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor LK04_RS12785 7c0c661dc355b32b883648177228c9c7 392 Pfam PF00534 Glycosyl transferases group 1 166 319 2.7E-11 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LK04_RS12785 7c0c661dc355b32b883648177228c9c7 392 SUPERFAMILY SSF53756 40 380 3.14E-28 T 22-04-2016 LK04_RS12785 7c0c661dc355b32b883648177228c9c7 392 Gene3D G3DSA:3.40.50.2000 166 310 1.2E-6 T 22-04-2016 LK04_RS12785 7c0c661dc355b32b883648177228c9c7 392 PANTHER PTHR12526 336 381 6.3E-22 T 22-04-2016 LK04_RS12785 7c0c661dc355b32b883648177228c9c7 392 PANTHER PTHR12526 165 315 6.3E-22 T 22-04-2016 LK04_RS06515 4196c22b5a5e2cabda48701a3f042e97 307 Pfam PF13407 Periplasmic binding protein domain 27 281 4.6E-63 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS06515 4196c22b5a5e2cabda48701a3f042e97 307 SUPERFAMILY SSF53822 23 301 5.27E-86 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS06515 4196c22b5a5e2cabda48701a3f042e97 307 PANTHER PTHR32196 21 298 5.8E-52 T 22-04-2016 LK04_RS06515 4196c22b5a5e2cabda48701a3f042e97 307 Gene3D G3DSA:3.40.50.2300 145 301 1.7E-55 T 22-04-2016 LK04_RS06515 4196c22b5a5e2cabda48701a3f042e97 307 PANTHER PTHR32196:SF9 21 298 5.8E-52 T 22-04-2016 LK04_RS06515 4196c22b5a5e2cabda48701a3f042e97 307 Gene3D G3DSA:3.40.50.2300 22 144 6.9E-34 T 22-04-2016 LK04_RS02690 a895ce5f013e741092bbc6b317c54c5a 150 Gene3D G3DSA:3.40.930.10 3 146 2.6E-50 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS02690 a895ce5f013e741092bbc6b317c54c5a 150 PANTHER PTHR30505 4 144 1.0E-48 T 22-04-2016 LK04_RS02690 a895ce5f013e741092bbc6b317c54c5a 150 SUPERFAMILY SSF55804 3 147 1.83E-37 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LK04_RS02690 a895ce5f013e741092bbc6b317c54c5a 150 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS02690 a895ce5f013e741092bbc6b317c54c5a 150 PANTHER PTHR30505:SF3 4 144 1.0E-48 T 22-04-2016 LK04_RS02690 a895ce5f013e741092bbc6b317c54c5a 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 145 4.0E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS14490 68a835b4cad506caa9a7e96e2b6db301 407 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 24 401 1.5E-97 T 22-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 LK04_RS14490 68a835b4cad506caa9a7e96e2b6db301 407 PANTHER PTHR23514 19 407 4.3E-135 T 22-04-2016 LK04_RS14490 68a835b4cad506caa9a7e96e2b6db301 407 Pfam PF07690 Major Facilitator Superfamily 31 370 5.5E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS14490 68a835b4cad506caa9a7e96e2b6db301 407 SUPERFAMILY SSF103473 21 402 1.31E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS14490 68a835b4cad506caa9a7e96e2b6db301 407 PANTHER PTHR23514:SF7 19 407 4.3E-135 T 22-04-2016 LK04_RS14490 68a835b4cad506caa9a7e96e2b6db301 407 Gene3D G3DSA:1.20.1250.20 227 401 2.4E-8 T 22-04-2016 LK04_RS14490 68a835b4cad506caa9a7e96e2b6db301 407 Gene3D G3DSA:1.20.1250.20 23 210 5.6E-25 T 22-04-2016 LK04_RS14725 abb68e2de2686fed1c7d3edf92578cb5 61 Pfam PF13318 Protein of unknown function (DUF4089) 10 59 2.3E-22 T 22-04-2016 IPR025148 Protein of unknown function DUF4089 LK04_RS16250 1f964797767d63080a9338a092db062e 366 PANTHER PTHR33529 2 362 2.3E-131 T 22-04-2016 LK04_RS16250 1f964797767d63080a9338a092db062e 366 PANTHER PTHR33529:SF2 2 362 2.3E-131 T 22-04-2016 LK04_RS16250 1f964797767d63080a9338a092db062e 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 5.5E-117 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 LK04_RS16250 1f964797767d63080a9338a092db062e 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 5.8E-73 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 LK04_RS05640 815ba4c2d079e7f71ec61c092108b4e9 151 Gene3D G3DSA:3.10.450.50 8 150 2.5E-72 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS05640 815ba4c2d079e7f71ec61c092108b4e9 151 PANTHER PTHR31757 2 151 3.5E-80 T 22-04-2016 LK04_RS05640 815ba4c2d079e7f71ec61c092108b4e9 151 PANTHER PTHR31757:SF0 2 151 3.5E-80 T 22-04-2016 LK04_RS05640 815ba4c2d079e7f71ec61c092108b4e9 151 SUPERFAMILY SSF54427 3 151 1.19E-73 T 22-04-2016 IPR032710 NTF2-like domain LK04_RS05640 815ba4c2d079e7f71ec61c092108b4e9 151 Pfam PF07080 Protein of unknown function (DUF1348) 2 141 1.6E-68 T 22-04-2016 IPR009783 Protein of unknown function DUF1348 LK04_RS13650 841273e51fabe5a08bd1f06167b7b5b1 167 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 1.0E-57 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 LK04_RS13650 841273e51fabe5a08bd1f06167b7b5b1 167 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 140 7.0E-33 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 LK04_RS18140 c41c5d458963debb44fbc73b1a9cc23d 356 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 355 63.381 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 LK04_RS18140 c41c5d458963debb44fbc73b1a9cc23d 356 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 2 352 8.8E-170 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 PANTHER PTHR30419:SF4 1 298 5.0E-47 T 22-04-2016 LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 Gene3D G3DSA:1.10.10.10 2 85 8.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.5E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 Gene3D G3DSA:3.40.190.10 190 265 3.5E-12 T 22-04-2016 LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 Gene3D G3DSA:3.40.190.10 88 189 4.5E-11 T 22-04-2016 LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 PANTHER PTHR30419 1 298 5.0E-47 T 22-04-2016 LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 SUPERFAMILY SSF46785 1 87 9.75E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 SUPERFAMILY SSF53850 88 297 3.08E-26 T 22-04-2016 LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 Pfam PF03466 LysR substrate binding domain 88 296 6.2E-26 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS08345 db65637e0f8d1ff44446e2c36fcaa8b1 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS06190 efa7ae839a3096bdb151b04e2ab7306e 438 Pfam PF07805 HipA-like N-terminal domain 165 255 5.8E-10 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 LK04_RS06190 efa7ae839a3096bdb151b04e2ab7306e 438 Pfam PF07804 HipA-like C-terminal domain 269 352 8.0E-11 T 22-04-2016 IPR012893 HipA-like, C-terminal LK04_RS06190 efa7ae839a3096bdb151b04e2ab7306e 438 PIRSF PIRSF028135 1 438 1.3E-160 T 22-04-2016 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like LK04_RS02010 9243aa9dd396ffd7b3b26442390893db 299 Gene3D G3DSA:3.40.190.10 90 181 1.1E-12 T 22-04-2016 LK04_RS02010 9243aa9dd396ffd7b3b26442390893db 299 Gene3D G3DSA:1.10.10.10 1 84 5.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02010 9243aa9dd396ffd7b3b26442390893db 299 SUPERFAMILY SSF53850 89 295 1.19E-33 T 22-04-2016 LK04_RS02010 9243aa9dd396ffd7b3b26442390893db 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS02010 9243aa9dd396ffd7b3b26442390893db 299 SUPERFAMILY SSF46785 1 84 2.48E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02010 9243aa9dd396ffd7b3b26442390893db 299 Gene3D G3DSA:3.40.190.10 182 262 6.6E-16 T 22-04-2016 LK04_RS02010 9243aa9dd396ffd7b3b26442390893db 299 Pfam PF03466 LysR substrate binding domain 90 293 1.1E-30 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS02010 9243aa9dd396ffd7b3b26442390893db 299 PANTHER PTHR30126 1 294 1.4E-58 T 22-04-2016 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 PANTHER PTHR12220 1 136 1.9E-76 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 9.1E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 Gene3D G3DSA:3.90.1170.10 22 133 9.6E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 SUPERFAMILY SSF54686 3 133 4.32E-55 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.251 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.6E-59 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.9E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.9E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.9E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.9E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LK04_RS00905 9f35cbf385575a68bf36bace88078783 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS12955 1b1559a8e578656a23e9c26a0a9732d3 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.408 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 LK04_RS12955 1b1559a8e578656a23e9c26a0a9732d3 250 PANTHER PTHR11931 1 250 2.0E-169 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 LK04_RS12955 1b1559a8e578656a23e9c26a0a9732d3 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 2.5E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LK04_RS12955 1b1559a8e578656a23e9c26a0a9732d3 250 Gene3D G3DSA:3.40.50.1240 2 250 7.0E-97 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS12955 1b1559a8e578656a23e9c26a0a9732d3 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 4.6E-127 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 LK04_RS12955 1b1559a8e578656a23e9c26a0a9732d3 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 LK04_RS12955 1b1559a8e578656a23e9c26a0a9732d3 250 SUPERFAMILY SSF53254 4 247 6.79E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LK04_RS12955 1b1559a8e578656a23e9c26a0a9732d3 250 SMART SM00855 5 191 2.8E-28 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LK04_RS19080 830586261c754251c9944b1756779cbb 622 PANTHER PTHR30540 16 622 5.6E-274 T 22-04-2016 LK04_RS19080 830586261c754251c9944b1756779cbb 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.541 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup LK04_RS19080 830586261c754251c9944b1756779cbb 622 TIGRFAM TIGR00794 kup: potassium uptake protein 98 550 2.9E-187 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 LK04_RS19080 830586261c754251c9944b1756779cbb 622 Pfam PF02705 K+ potassium transporter 14 544 1.8E-207 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 LK04_RS19080 830586261c754251c9944b1756779cbb 622 PANTHER PTHR30540:SF7 16 622 5.6E-274 T 22-04-2016 LK04_RS16135 dea3864796ca7e311ef06f3b37c384d3 258 PANTHER PTHR10204:SF46 1 219 1.6E-104 T 22-04-2016 LK04_RS16135 dea3864796ca7e311ef06f3b37c384d3 258 Pfam PF02525 Flavodoxin-like fold 1 204 2.1E-57 T 22-04-2016 IPR003680 Flavodoxin-like fold LK04_RS16135 dea3864796ca7e311ef06f3b37c384d3 258 SUPERFAMILY SSF52218 1 244 5.47E-72 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS16135 dea3864796ca7e311ef06f3b37c384d3 258 Gene3D G3DSA:3.40.50.360 1 234 4.7E-74 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS16135 dea3864796ca7e311ef06f3b37c384d3 258 PANTHER PTHR10204 1 219 1.6E-104 T 22-04-2016 LK04_RS03745 2acd1c5e7cbe68ad391066f1ebdbd043 106 PANTHER PTHR35462 2 106 1.7E-49 T 22-04-2016 LK04_RS03745 2acd1c5e7cbe68ad391066f1ebdbd043 106 PANTHER PTHR35462:SF1 2 106 1.7E-49 T 22-04-2016 LK04_RS03745 2acd1c5e7cbe68ad391066f1ebdbd043 106 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 24 99 8.4E-7 T 22-04-2016 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein LK04_RS09105 ac35c8775a49fa4abb427f5b0bb6006f 257 PANTHER PTHR21139:SF2 1 257 2.2E-70 T 22-04-2016 LK04_RS09105 ac35c8775a49fa4abb427f5b0bb6006f 257 Pfam PF00121 Triosephosphate isomerase 9 246 1.0E-48 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LK04_RS09105 ac35c8775a49fa4abb427f5b0bb6006f 257 PANTHER PTHR21139 1 257 2.2E-70 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LK04_RS09105 ac35c8775a49fa4abb427f5b0bb6006f 257 SUPERFAMILY SSF51351 5 248 6.81E-54 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LK04_RS09105 ac35c8775a49fa4abb427f5b0bb6006f 257 Gene3D G3DSA:3.20.20.70 5 249 7.1E-67 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS01570 1615f7b685661e7a2fc1873cd30013a7 245 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 243 3.8E-122 T 22-04-2016 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LK04_RS01570 1615f7b685661e7a2fc1873cd30013a7 245 SUPERFAMILY SSF51569 53 214 7.69E-6 T 22-04-2016 LK04_RS01570 1615f7b685661e7a2fc1873cd30013a7 245 Pfam PF07071 Protein of unknown function (DUF1341) 8 224 1.5E-111 T 22-04-2016 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LK04_RS17550 fed5a63924e5f39a08f77451c7751e64 221 PANTHER PTHR34300:SF1 1 221 9.7E-126 T 22-04-2016 LK04_RS17550 fed5a63924e5f39a08f77451c7751e64 221 Pfam PF02592 Putative vitamin uptake transporter 43 198 2.6E-33 T 22-04-2016 IPR003744 Protein of unknown function DUF165 LK04_RS17550 fed5a63924e5f39a08f77451c7751e64 221 PANTHER PTHR34300 1 221 9.7E-126 T 22-04-2016 LK04_RS17550 fed5a63924e5f39a08f77451c7751e64 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 203 2.2E-60 T 22-04-2016 IPR003744 Protein of unknown function DUF165 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 PANTHER PTHR30244 251 429 1.8E-130 T 22-04-2016 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 PANTHER PTHR30244 2 190 1.8E-130 T 22-04-2016 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 SUPERFAMILY SSF64518 1 429 4.84E-105 T 22-04-2016 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 PANTHER PTHR30244:SF1 251 429 1.8E-130 T 22-04-2016 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 PANTHER PTHR30244:SF1 2 190 1.8E-130 T 22-04-2016 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 Gene3D G3DSA:1.20.1330.10 331 385 1.1E-59 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 Gene3D G3DSA:1.20.1330.10 54 170 1.1E-59 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 Pfam PF00700 Bacterial flagellin C-terminal helical region 344 428 3.0E-30 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 1.0E-45 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 PRINTS PR00207 Flagellin signature 76 95 9.9E-32 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 PRINTS PR00207 Flagellin signature 111 134 9.9E-32 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LK04_RS07040 fdd10ce09a4aaee22b89a06058e40655 430 PRINTS PR00207 Flagellin signature 37 54 9.9E-32 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LK04_RS08140 99e3b6ece27d7fccebd5b64c7a5d5fd9 98 Gene3D G3DSA:3.30.70.1060 2 98 3.7E-35 T 22-04-2016 LK04_RS08140 99e3b6ece27d7fccebd5b64c7a5d5fd9 98 Pfam PF03795 YCII-related domain 2 95 2.1E-27 T 22-04-2016 IPR005545 YCII-related LK04_RS08140 99e3b6ece27d7fccebd5b64c7a5d5fd9 98 SUPERFAMILY SSF54909 2 98 1.61E-30 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS08140 99e3b6ece27d7fccebd5b64c7a5d5fd9 98 PANTHER PTHR33606 1 98 6.5E-33 T 22-04-2016 LK04_RS11845 94e14e028a0dd2188a1faa2f0af0ede1 147 PIRSF PIRSF028777 1 139 6.0E-53 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 LK04_RS11845 94e14e028a0dd2188a1faa2f0af0ede1 147 PANTHER PTHR31503 1 147 6.6E-58 T 22-04-2016 LK04_RS11845 94e14e028a0dd2188a1faa2f0af0ede1 147 Pfam PF03733 Inner membrane component domain 4 53 5.7E-10 T 22-04-2016 IPR005185 Inner membrane component domain LK04_RS11845 94e14e028a0dd2188a1faa2f0af0ede1 147 Pfam PF03733 Inner membrane component domain 77 127 1.8E-17 T 22-04-2016 IPR005185 Inner membrane component domain LK04_RS09300 1d2b7cf5bc06d44263232dc1ea9d3b1a 187 SUPERFAMILY SSF52540 12 128 2.42E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09300 1d2b7cf5bc06d44263232dc1ea9d3b1a 187 PANTHER PTHR37816 13 186 1.4E-22 T 22-04-2016 LK04_RS09300 1d2b7cf5bc06d44263232dc1ea9d3b1a 187 Pfam PF13238 AAA domain 14 111 8.7E-8 T 22-04-2016 LK04_RS09300 1d2b7cf5bc06d44263232dc1ea9d3b1a 187 Gene3D G3DSA:3.40.50.300 71 127 3.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09300 1d2b7cf5bc06d44263232dc1ea9d3b1a 187 Gene3D G3DSA:3.40.50.300 12 24 3.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09300 1d2b7cf5bc06d44263232dc1ea9d3b1a 187 Gene3D G3DSA:3.40.50.300 25 70 2.8E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS15785 d132197baddbaf860c9c3cdc9a905fa0 220 PANTHER PTHR38033:SF1 7 217 7.7E-36 T 22-04-2016 LK04_RS15785 d132197baddbaf860c9c3cdc9a905fa0 220 Pfam PF09850 Type VI secretion system protein DotU 7 205 9.0E-49 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU LK04_RS15785 d132197baddbaf860c9c3cdc9a905fa0 220 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 7 210 2.3E-50 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU LK04_RS15785 d132197baddbaf860c9c3cdc9a905fa0 220 PANTHER PTHR38033 7 217 7.7E-36 T 22-04-2016 LK04_RS13025 3f69534f8b6680b44fd371964ad44276 171 SUPERFAMILY SSF103088 58 170 6.67E-34 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS13025 3f69534f8b6680b44fd371964ad44276 171 PANTHER PTHR30128:SF18 47 171 7.0E-65 T 22-04-2016 LK04_RS13025 3f69534f8b6680b44fd371964ad44276 171 Pfam PF00691 OmpA family 70 165 4.7E-21 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS13025 3f69534f8b6680b44fd371964ad44276 171 ProSitePatterns PS01068 OmpA-like domain. 103 147 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LK04_RS13025 3f69534f8b6680b44fd371964ad44276 171 PRINTS PR01021 OMPA domain signature 116 132 3.6E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS13025 3f69534f8b6680b44fd371964ad44276 171 PRINTS PR01021 OMPA domain signature 101 116 3.6E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS13025 3f69534f8b6680b44fd371964ad44276 171 PRINTS PR01021 OMPA domain signature 71 93 3.6E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LK04_RS13025 3f69534f8b6680b44fd371964ad44276 171 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 69 171 1.8E-46 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 LK04_RS13025 3f69534f8b6680b44fd371964ad44276 171 PANTHER PTHR30128 47 171 7.0E-65 T 22-04-2016 LK04_RS13025 3f69534f8b6680b44fd371964ad44276 171 Gene3D G3DSA:3.30.1330.60 59 170 1.1E-33 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS09000 c43e6e9f3c7bbb8a920fb7726008f194 548 PANTHER PTHR24222:SF30 1 546 2.1E-142 T 22-04-2016 LK04_RS09000 c43e6e9f3c7bbb8a920fb7726008f194 548 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 532 2.0E-132 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 LK04_RS09000 c43e6e9f3c7bbb8a920fb7726008f194 548 SMART SM00382 363 548 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS09000 c43e6e9f3c7bbb8a920fb7726008f194 548 PANTHER PTHR24222 1 546 2.1E-142 T 22-04-2016 LK04_RS09000 c43e6e9f3c7bbb8a920fb7726008f194 548 SUPERFAMILY SSF90123 7 321 1.14E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LK04_RS09000 c43e6e9f3c7bbb8a920fb7726008f194 548 Gene3D G3DSA:3.40.50.300 337 545 1.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09000 c43e6e9f3c7bbb8a920fb7726008f194 548 SUPERFAMILY SSF52540 331 545 1.33E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09000 c43e6e9f3c7bbb8a920fb7726008f194 548 Pfam PF00005 ABC transporter 354 502 2.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS09000 c43e6e9f3c7bbb8a920fb7726008f194 548 Gene3D G3DSA:1.20.1560.10 7 326 6.5E-32 T 22-04-2016 LK04_RS09000 c43e6e9f3c7bbb8a920fb7726008f194 548 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS00690 edac7479c938bd701a267d89d50bb9fd 427 Pfam PF07969 Amidohydrolase family 47 406 2.6E-54 T 22-04-2016 IPR013108 Amidohydrolase 3 LK04_RS00690 edac7479c938bd701a267d89d50bb9fd 427 SUPERFAMILY SSF51556 57 375 2.19E-104 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS00690 edac7479c938bd701a267d89d50bb9fd 427 PANTHER PTHR32027 9 427 6.4E-176 T 22-04-2016 LK04_RS00690 edac7479c938bd701a267d89d50bb9fd 427 Gene3D G3DSA:2.30.40.10 25 65 4.2E-4 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LK04_RS00690 edac7479c938bd701a267d89d50bb9fd 427 Gene3D G3DSA:3.20.20.140 66 366 3.1E-124 T 22-04-2016 LK04_RS00690 edac7479c938bd701a267d89d50bb9fd 427 PANTHER PTHR32027:SF0 9 427 6.4E-176 T 22-04-2016 LK04_RS14005 e69ae5aa0219c488aae17da7bf762fb6 308 SUPERFAMILY SSF81464 29 116 2.29E-23 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 LK04_RS14005 e69ae5aa0219c488aae17da7bf762fb6 308 PANTHER PTHR22888 1 268 2.5E-158 T 22-04-2016 LK04_RS14005 e69ae5aa0219c488aae17da7bf762fb6 308 PANTHER PTHR22888:SF13 1 268 2.5E-158 T 22-04-2016 LK04_RS14005 e69ae5aa0219c488aae17da7bf762fb6 308 PIRSF PIRSF000292 1 308 3.7E-135 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 LK04_RS14005 e69ae5aa0219c488aae17da7bf762fb6 308 Pfam PF06481 COX Aromatic Rich Motif 239 285 3.2E-19 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 LK04_RS14005 e69ae5aa0219c488aae17da7bf762fb6 308 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 239 3.9E-121 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 LK04_RS14005 e69ae5aa0219c488aae17da7bf762fb6 308 SUPERFAMILY SSF49503 122 282 3.58E-53 T 22-04-2016 IPR008972 Cupredoxin LK04_RS14005 e69ae5aa0219c488aae17da7bf762fb6 308 Gene3D G3DSA:2.60.40.420 123 280 9.8E-42 T 22-04-2016 IPR008972 Cupredoxin LK04_RS14005 e69ae5aa0219c488aae17da7bf762fb6 308 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 147 219 7.4E-7 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 LK04_RS14005 e69ae5aa0219c488aae17da7bf762fb6 308 Gene3D G3DSA:1.10.287.90 29 113 9.6E-36 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 PANTHER PTHR11911 178 323 2.1E-42 T 22-04-2016 LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 SMART SM00116 213 261 13.0 T 22-04-2016 IPR000644 CBS domain LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 SMART SM00116 278 325 1.4 T 22-04-2016 IPR000644 CBS domain LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 Gene3D G3DSA:3.40.50.10490 15 198 3.0E-52 T 22-04-2016 LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 Gene3D G3DSA:3.10.580.10 199 323 1.5E-39 T 22-04-2016 LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 316 1.2E-123 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 SUPERFAMILY SSF53697 11 321 2.45E-67 T 22-04-2016 LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 PANTHER PTHR11911:SF90 178 323 2.1E-42 T 22-04-2016 LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 Pfam PF01380 SIS domain 44 175 1.1E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 PIRSF PIRSF004692 1 326 3.6E-135 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 Pfam PF00571 CBS domain 204 259 2.8E-6 T 22-04-2016 IPR000644 CBS domain LK04_RS16605 f34f95ba4f394498e589a25f1cd44779 326 Pfam PF00571 CBS domain 272 323 4.7E-8 T 22-04-2016 IPR000644 CBS domain LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 77.096 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 Gene3D G3DSA:3.30.479.20 227 262 1.1E-28 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 Gene3D G3DSA:3.30.479.20 143 178 1.1E-28 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 SUPERFAMILY SSF46934 4 54 1.94E-18 T 22-04-2016 IPR009060 UBA-like GO:0005515 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 5.6E-117 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 Gene3D G3DSA:1.10.8.10 2 55 9.1E-28 T 22-04-2016 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 PANTHER PTHR11741 1 283 2.4E-135 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 SUPERFAMILY SSF54713 56 139 9.81E-19 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 Gene3D G3DSA:1.10.286.20 183 226 7.7E-20 T 22-04-2016 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 SUPERFAMILY SSF54713 143 281 1.31E-50 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 LK04_RS14980 73089ec6ba2edca7cf34a9e6301c450a 283 Pfam PF00889 Elongation factor TS 71 263 2.6E-64 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 PRINTS PR00811 Bacterial general secretion pathway protein D signature 223 247 4.5E-15 T 22-04-2016 IPR001775 GspD/PilQ family LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 PRINTS PR00811 Bacterial general secretion pathway protein D signature 374 388 4.5E-15 T 22-04-2016 IPR001775 GspD/PilQ family LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 PRINTS PR00811 Bacterial general secretion pathway protein D signature 351 369 4.5E-15 T 22-04-2016 IPR001775 GspD/PilQ family LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 Pfam PF03958 Bacterial type II/III secretion system short domain 94 157 3.2E-9 T 22-04-2016 IPR005644 NolW-like LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 PANTHER PTHR30604 2 394 1.1E-94 T 22-04-2016 LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 2 386 8.6E-114 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 Pfam PF00263 Bacterial type II and III secretion system protein 227 387 3.2E-49 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 PRINTS PR01032 Gene IV protein signature 314 342 8.6E-11 T 22-04-2016 LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 PRINTS PR01032 Gene IV protein signature 367 389 8.6E-11 T 22-04-2016 LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 PRINTS PR01032 Gene IV protein signature 248 271 8.6E-11 T 22-04-2016 LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 PRINTS PR01032 Gene IV protein signature 207 230 8.6E-11 T 22-04-2016 LK04_RS00630 f4dde8031a8cf4c4c07a9b26a9c1f30a 394 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 332 365 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 LK04_RS12335 7a2e8acd81c23e382779d2693a33a3b4 218 Pfam PF11769 Protein of unknown function (DUF3313) 15 211 1.2E-56 T 22-04-2016 IPR021747 Protein of unknown function DUF3313 LK04_RS10385 ff2b1de6bfa399f315c93545201baf58 370 Pfam PF01594 Domain of unknown function DUF20 15 344 4.9E-49 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LK04_RS10385 ff2b1de6bfa399f315c93545201baf58 370 PANTHER PTHR21716:SF20 5 367 1.6E-151 T 22-04-2016 LK04_RS10385 ff2b1de6bfa399f315c93545201baf58 370 PANTHER PTHR21716 5 367 1.6E-151 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LK04_RS19435 769ae99e4dcb31feda5afc81ae7def15 323 Gene3D G3DSA:3.20.20.370 27 167 4.4E-5 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LK04_RS19435 769ae99e4dcb31feda5afc81ae7def15 323 SUPERFAMILY SSF88713 30 228 3.34E-10 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LK04_RS08760 85f857b87584da1eaa7392d094a854be 98 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 76 9.0E-21 T 22-04-2016 IPR010595 Protein of unknown function DUF1161 LK04_RS08760 85f857b87584da1eaa7392d094a854be 98 Pfam PF06649 Protein of unknown function (DUF1161) 23 76 6.7E-26 T 22-04-2016 IPR010595 Protein of unknown function DUF1161 LK04_RS04375 dcf27917bf7a6d1065f62ccb110d40ef 340 PANTHER PTHR30006 9 339 1.4E-46 T 22-04-2016 LK04_RS04375 dcf27917bf7a6d1065f62ccb110d40ef 340 Gene3D G3DSA:3.40.190.10 130 269 8.0E-42 T 22-04-2016 LK04_RS04375 dcf27917bf7a6d1065f62ccb110d40ef 340 Gene3D G3DSA:3.40.190.10 270 327 6.7E-29 T 22-04-2016 LK04_RS04375 dcf27917bf7a6d1065f62ccb110d40ef 340 Gene3D G3DSA:3.40.190.10 6 126 6.7E-29 T 22-04-2016 LK04_RS04375 dcf27917bf7a6d1065f62ccb110d40ef 340 Pfam PF13343 Bacterial extracellular solute-binding protein 79 315 1.4E-53 T 22-04-2016 LK04_RS04375 dcf27917bf7a6d1065f62ccb110d40ef 340 SUPERFAMILY SSF53850 29 331 1.94E-63 T 22-04-2016 LK04_RS10530 3fa26aaa912d24ec1c11da8cc026669a 111 Pfam PF04355 SmpA / OmlA family 28 95 7.4E-16 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 LK04_RS07105 3597d54665e084471baa0102321f9fcd 277 Pfam PF03239 Iron permease FTR1 family 1 255 1.7E-69 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 LK04_RS07105 3597d54665e084471baa0102321f9fcd 277 TIGRFAM TIGR00145 TIGR00145: FTR1 family protein 1 270 4.4E-95 T 22-04-2016 IPR005217 Iron permease FTR1-like GO:0005381|GO:0005886|GO:0006827|GO:0033573 LK04_RS07105 3597d54665e084471baa0102321f9fcd 277 PANTHER PTHR31632 1 267 3.8E-95 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 LK04_RS07895 af5578194c8c6ce2660d8f0cd085e152 91 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 6.0E-32 T 22-04-2016 IPR027354 YcgL domain LK04_RS07895 af5578194c8c6ce2660d8f0cd085e152 91 Pfam PF05166 YcgL domain 3 75 1.3E-31 T 22-04-2016 IPR027354 YcgL domain LK04_RS07895 af5578194c8c6ce2660d8f0cd085e152 91 SUPERFAMILY SSF160191 1 87 2.62E-37 T 22-04-2016 LK04_RS07895 af5578194c8c6ce2660d8f0cd085e152 91 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 26.293 T 22-04-2016 IPR027354 YcgL domain LK04_RS07895 af5578194c8c6ce2660d8f0cd085e152 91 PANTHER PTHR38109 2 86 4.4E-36 T 22-04-2016 LK04_RS10980 df239e9b7bb044af48529a0aeee07b1a 271 Gene3D G3DSA:3.30.420.10 101 259 6.4E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS10980 df239e9b7bb044af48529a0aeee07b1a 271 Pfam PF00665 Integrase core domain 107 221 9.9E-25 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS10980 df239e9b7bb044af48529a0aeee07b1a 271 SUPERFAMILY SSF53098 100 266 9.56E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS10980 df239e9b7bb044af48529a0aeee07b1a 271 Pfam PF13276 HTH-like domain 32 84 4.1E-10 T 22-04-2016 IPR025948 HTH-like domain LK04_RS10980 df239e9b7bb044af48529a0aeee07b1a 271 PANTHER PTHR32552 3 264 1.4E-67 T 22-04-2016 LK04_RS15860 df239e9b7bb044af48529a0aeee07b1a 271 Gene3D G3DSA:3.30.420.10 101 259 6.4E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS15860 df239e9b7bb044af48529a0aeee07b1a 271 Pfam PF00665 Integrase core domain 107 221 9.9E-25 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS15860 df239e9b7bb044af48529a0aeee07b1a 271 SUPERFAMILY SSF53098 100 266 9.56E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS15860 df239e9b7bb044af48529a0aeee07b1a 271 Pfam PF13276 HTH-like domain 32 84 4.1E-10 T 22-04-2016 IPR025948 HTH-like domain LK04_RS15860 df239e9b7bb044af48529a0aeee07b1a 271 PANTHER PTHR32552 3 264 1.4E-67 T 22-04-2016 LK04_RS02675 c943ebda38090c42b5f0e5c4eee1e9ca 239 Pfam PF11101 Protein of unknown function (DUF2884) 24 238 1.2E-41 T 22-04-2016 IPR021307 Protein of unknown function DUF2884 LK04_RS09020 e23228a0e19aa0063069c13cbe42186b 92 Gene3D G3DSA:1.10.720.30 14 72 7.5E-32 T 22-04-2016 IPR003034 SAP domain LK04_RS09020 e23228a0e19aa0063069c13cbe42186b 92 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 7 68 4.6E-34 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 LK04_RS17230 028aa6b1fa3be0671b23604442ea5687 93 PIRSF PIRSF030798 1 93 5.6E-26 T 22-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 LK04_RS17230 028aa6b1fa3be0671b23604442ea5687 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 92 3.0E-11 T 22-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 LK04_RS17230 028aa6b1fa3be0671b23604442ea5687 93 Pfam PF15940 Family of unknown function 1 92 5.7E-45 T 22-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 LK04_RS11815 4afe30bb643adfd37510ca7a77fd0479 396 SUPERFAMILY SSF53335 80 392 4.84E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS11815 4afe30bb643adfd37510ca7a77fd0479 396 Gene3D G3DSA:3.40.50.150 185 395 1.3E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS11815 4afe30bb643adfd37510ca7a77fd0479 396 PANTHER PTHR11061 5 396 4.2E-124 T 22-04-2016 LK04_RS11815 4afe30bb643adfd37510ca7a77fd0479 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 67.739 T 22-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LK04_RS11815 4afe30bb643adfd37510ca7a77fd0479 396 Gene3D G3DSA:2.30.130.10 4 72 2.5E-27 T 22-04-2016 IPR015947 PUA-like domain LK04_RS11815 4afe30bb643adfd37510ca7a77fd0479 396 SUPERFAMILY SSF88697 4 72 3.68E-17 T 22-04-2016 IPR015947 PUA-like domain LK04_RS11815 4afe30bb643adfd37510ca7a77fd0479 396 Gene3D G3DSA:3.30.750.80 73 180 1.0E-33 T 22-04-2016 LK04_RS11815 4afe30bb643adfd37510ca7a77fd0479 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 185 372 2.8E-28 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 LK04_RS11815 4afe30bb643adfd37510ca7a77fd0479 396 PANTHER PTHR11061:SF12 5 396 4.2E-124 T 22-04-2016 LK04_RS11815 4afe30bb643adfd37510ca7a77fd0479 396 SMART SM00359 3 88 4.1E-14 T 22-04-2016 IPR002478 PUA domain GO:0003723 LK04_RS02385 a8e9735998bc022d61f90c99db2d9e66 182 PANTHER PTHR33420 6 182 1.7E-16 T 22-04-2016 LK04_RS02385 a8e9735998bc022d61f90c99db2d9e66 182 Gene3D G3DSA:2.60.40.1090 34 182 7.8E-22 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LK04_RS02385 a8e9735998bc022d61f90c99db2d9e66 182 SUPERFAMILY SSF49401 36 182 6.46E-28 T 22-04-2016 IPR008966 Adhesion domain LK04_RS13825 15c4f88e59bb196f3eef7d8f556832cc 170 Pfam PF07445 Primosomal replication protein priC 8 165 2.8E-38 T 22-04-2016 IPR010890 Primosomal replication PriB/PriC LK04_RS10760 b44389b294f6c5cc18ab8b9b328877b2 264 Gene3D G3DSA:3.40.50.1820 5 256 4.4E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS10760 b44389b294f6c5cc18ab8b9b328877b2 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 6.1E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS10760 b44389b294f6c5cc18ab8b9b328877b2 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 6.1E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS10760 b44389b294f6c5cc18ab8b9b328877b2 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 6.1E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS10760 b44389b294f6c5cc18ab8b9b328877b2 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 6.1E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS10760 b44389b294f6c5cc18ab8b9b328877b2 264 SUPERFAMILY SSF53474 4 255 2.55E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS10760 b44389b294f6c5cc18ab8b9b328877b2 264 Pfam PF12697 Alpha/beta hydrolase family 22 249 6.4E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LK04_RS10760 b44389b294f6c5cc18ab8b9b328877b2 264 PANTHER PTHR10992 3 257 2.5E-52 T 22-04-2016 LK04_RS10760 b44389b294f6c5cc18ab8b9b328877b2 264 PANTHER PTHR10992:SF771 3 257 2.5E-52 T 22-04-2016 LK04_RS19810 eb474e0b676a3d30925447fd9418ac85 333 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 47 321 1.4E-122 T 22-04-2016 IPR005274 Inner membrane protein YhjD LK04_RS19810 eb474e0b676a3d30925447fd9418ac85 333 Pfam PF03631 Virulence factor BrkB 61 320 4.3E-47 T 22-04-2016 IPR017039 Virulence factor BrkB LK04_RS19810 eb474e0b676a3d30925447fd9418ac85 333 PANTHER PTHR30213 18 329 1.7E-85 T 22-04-2016 LK04_RS19810 eb474e0b676a3d30925447fd9418ac85 333 PANTHER PTHR30213:SF1 18 329 1.7E-85 T 22-04-2016 LK04_RS08360 52176376e33cc0de7fe6384321a961a4 267 SUPERFAMILY SSF52540 4 250 4.13E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08360 52176376e33cc0de7fe6384321a961a4 267 PANTHER PTHR24220:SF81 6 254 1.4E-121 T 22-04-2016 LK04_RS08360 52176376e33cc0de7fe6384321a961a4 267 PANTHER PTHR24220 6 254 1.4E-121 T 22-04-2016 LK04_RS08360 52176376e33cc0de7fe6384321a961a4 267 SMART SM00382 38 227 3.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS08360 52176376e33cc0de7fe6384321a961a4 267 Gene3D G3DSA:3.40.50.300 2 251 1.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS08360 52176376e33cc0de7fe6384321a961a4 267 Pfam PF00005 ABC transporter 30 177 4.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS08360 52176376e33cc0de7fe6384321a961a4 267 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS07590 b10976c20e6c0c92c041b2d277269057 339 Pfam PF16263 Domain of unknown function (DUF4917) 21 338 2.2E-86 T 22-04-2016 IPR032581 Protein of unknown function DUF4917 LK04_RS00070 a784a3f933e4edf84bd65e550731ccc7 246 PANTHER PTHR24220 3 235 1.3E-92 T 22-04-2016 LK04_RS00070 a784a3f933e4edf84bd65e550731ccc7 246 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS00070 a784a3f933e4edf84bd65e550731ccc7 246 PANTHER PTHR24220:SF336 3 235 1.3E-92 T 22-04-2016 LK04_RS00070 a784a3f933e4edf84bd65e550731ccc7 246 SMART SM00382 26 212 4.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS00070 a784a3f933e4edf84bd65e550731ccc7 246 Gene3D G3DSA:3.40.50.300 1 233 4.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS00070 a784a3f933e4edf84bd65e550731ccc7 246 Pfam PF00005 ABC transporter 17 163 2.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS00070 a784a3f933e4edf84bd65e550731ccc7 246 SUPERFAMILY SSF52540 1 225 3.52E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18015 55cfde17faefdd0a68488d934ffad695 207 PANTHER PTHR30086:SF14 1 207 4.5E-114 T 22-04-2016 LK04_RS18015 55cfde17faefdd0a68488d934ffad695 207 PIRSF PIRSF006324 1 205 1.8E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS18015 55cfde17faefdd0a68488d934ffad695 207 Pfam PF01810 LysE type translocator 15 202 8.4E-45 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS18015 55cfde17faefdd0a68488d934ffad695 207 PANTHER PTHR30086 1 207 4.5E-114 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 Gene3D G3DSA:3.40.50.300 214 367 6.3E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 459 70.274 T 22-04-2016 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 PANTHER PTHR24031:SF180 1 441 5.2E-240 T 22-04-2016 LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 Pfam PF03880 DbpA RNA binding domain 386 455 4.3E-24 T 22-04-2016 IPR005580 DbpA, RNA-binding domain LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 Pfam PF00271 Helicase conserved C-terminal domain 231 336 2.0E-28 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 PANTHER PTHR24031 1 441 5.2E-240 T 22-04-2016 LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 SUPERFAMILY SSF52540 72 355 1.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 Gene3D G3DSA:3.40.50.300 2 207 3.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 SMART SM00490 255 336 4.0E-31 T 22-04-2016 IPR001650 Helicase, C-terminal LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 SMART SM00487 22 219 1.5E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LK04_RS14430 8fc3eca6885f6077f2d7ad7a6a535c85 459 Pfam PF00270 DEAD/DEAH box helicase 27 192 2.2E-46 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LK04_RS16035 1e363bbf45384edbb7738eac18c7640e 327 PANTHER PTHR12304 2 327 1.1E-58 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LK04_RS16035 1e363bbf45384edbb7738eac18c7640e 327 Gene3D G3DSA:3.90.245.10 1 325 1.1E-74 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LK04_RS16035 1e363bbf45384edbb7738eac18c7640e 327 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 312 2.9E-50 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LK04_RS16035 1e363bbf45384edbb7738eac18c7640e 327 SUPERFAMILY SSF53590 1 322 2.22E-66 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LK04_RS11175 588639ecadac9f5b554bdc400d1e955c 373 PANTHER PTHR13096 7 324 2.4E-72 T 22-04-2016 LK04_RS11175 588639ecadac9f5b554bdc400d1e955c 373 SMART SM00558 92 215 1.4E-9 T 22-04-2016 IPR003347 JmjC domain LK04_RS11175 588639ecadac9f5b554bdc400d1e955c 373 SUPERFAMILY SSF51197 7 292 1.25E-73 T 22-04-2016 LK04_RS11175 588639ecadac9f5b554bdc400d1e955c 373 Pfam PF08007 Cupin superfamily protein 10 309 3.1E-102 T 22-04-2016 IPR003347 JmjC domain LK04_RS11175 588639ecadac9f5b554bdc400d1e955c 373 Gene3D G3DSA:2.60.120.650 6 206 1.2E-45 T 22-04-2016 LK04_RS16320 9e468f5e180de763ea95aa74accce808 345 Pfam PF03773 Predicted permease 69 340 1.4E-24 T 22-04-2016 IPR005524 Predicted permease DUF318 LK04_RS16320 9e468f5e180de763ea95aa74accce808 345 Pfam PF03773 Predicted permease 56 149 7.0E-13 T 22-04-2016 IPR005524 Predicted permease DUF318 LK04_RS16320 9e468f5e180de763ea95aa74accce808 345 PANTHER PTHR34184 40 341 2.4E-96 T 22-04-2016 LK04_RS16320 9e468f5e180de763ea95aa74accce808 345 PANTHER PTHR34184:SF3 40 341 2.4E-96 T 22-04-2016 LK04_RS05885 84d601d8a04278644e917375da672c21 115 Pfam PF04480 Protein of unknown function (DUF559) 4 111 8.7E-40 T 22-04-2016 IPR007569 Domain of unknown function DUF559 LK04_RS05885 84d601d8a04278644e917375da672c21 115 Gene3D G3DSA:3.40.960.10 74 109 8.8E-5 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 LK04_RS05885 84d601d8a04278644e917375da672c21 115 PANTHER PTHR38590 5 109 3.8E-41 T 22-04-2016 LK04_RS05885 84d601d8a04278644e917375da672c21 115 PANTHER PTHR38590:SF1 5 109 3.8E-41 T 22-04-2016 LK04_RS05885 84d601d8a04278644e917375da672c21 115 SUPERFAMILY SSF52980 7 111 5.15E-21 T 22-04-2016 IPR011335 Restriction endonuclease type II-like LK04_RS18380 df80e4efd2f2210477ee70cee8d8d29e 197 SMART SM00471 27 136 2.8E-7 T 22-04-2016 IPR003607 HD/PDEase domain LK04_RS18380 df80e4efd2f2210477ee70cee8d8d29e 197 SUPERFAMILY SSF109604 6 154 9.77E-37 T 22-04-2016 LK04_RS18380 df80e4efd2f2210477ee70cee8d8d29e 197 PANTHER PTHR21262 8 126 2.3E-22 T 22-04-2016 LK04_RS18380 df80e4efd2f2210477ee70cee8d8d29e 197 Pfam PF13328 HD domain 9 134 2.9E-21 T 22-04-2016 IPR003607 HD/PDEase domain LK04_RS18300 0252e9d1a4d77bf1655527310717d580 148 Pfam PF03500 Cellulose synthase subunit D 37 129 1.8E-10 T 22-04-2016 IPR022798 Cellulose synthase subunit D, bacterial UniPathway: UPA00694 LK04_RS11640 92c7ac18f55f9e7380bdee1856b02462 559 PANTHER PTHR23501 30 552 9.7E-29 T 22-04-2016 LK04_RS11640 92c7ac18f55f9e7380bdee1856b02462 559 SUPERFAMILY SSF103473 274 446 3.01E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS11640 92c7ac18f55f9e7380bdee1856b02462 559 SUPERFAMILY SSF103473 506 534 3.01E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS11640 92c7ac18f55f9e7380bdee1856b02462 559 SUPERFAMILY SSF103473 27 219 3.01E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS11640 92c7ac18f55f9e7380bdee1856b02462 559 Pfam PF07690 Major Facilitator Superfamily 43 437 1.3E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS11640 92c7ac18f55f9e7380bdee1856b02462 559 Gene3D G3DSA:1.20.1250.20 335 446 7.0E-9 T 22-04-2016 LK04_RS11640 92c7ac18f55f9e7380bdee1856b02462 559 Gene3D G3DSA:1.20.1250.20 36 220 1.6E-8 T 22-04-2016 LK04_RS11640 92c7ac18f55f9e7380bdee1856b02462 559 Gene3D G3DSA:1.20.1250.20 507 532 7.0E-9 T 22-04-2016 LK04_RS13455 6b473252470204ae6ed177a2454c7ce0 69 PRINTS PR00050 Cold shock protein signature 27 36 1.2E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS13455 6b473252470204ae6ed177a2454c7ce0 69 PRINTS PR00050 Cold shock protein signature 42 60 1.2E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS13455 6b473252470204ae6ed177a2454c7ce0 69 PRINTS PR00050 Cold shock protein signature 6 21 1.2E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS13455 6b473252470204ae6ed177a2454c7ce0 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 8.5E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LK04_RS13455 6b473252470204ae6ed177a2454c7ce0 69 SMART SM00357 5 69 7.0E-32 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 LK04_RS13455 6b473252470204ae6ed177a2454c7ce0 69 Gene3D G3DSA:2.40.50.140 4 67 8.7E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS13455 6b473252470204ae6ed177a2454c7ce0 69 PANTHER PTHR11544 1 69 8.3E-41 T 22-04-2016 LK04_RS13455 6b473252470204ae6ed177a2454c7ce0 69 PIRSF PIRSF002599 1 69 7.8E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 LK04_RS13455 6b473252470204ae6ed177a2454c7ce0 69 SUPERFAMILY SSF50249 3 68 9.21E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS13455 6b473252470204ae6ed177a2454c7ce0 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site LK04_RS18130 fabfcbd4914d08b25d54be1a3680f5c4 244 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 63 229 8.2E-51 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 LK04_RS18130 fabfcbd4914d08b25d54be1a3680f5c4 244 PANTHER PTHR34136:SF1 1 238 2.8E-88 T 22-04-2016 LK04_RS18130 fabfcbd4914d08b25d54be1a3680f5c4 244 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 244 59.651 T 22-04-2016 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 LK04_RS18130 fabfcbd4914d08b25d54be1a3680f5c4 244 PANTHER PTHR34136 1 238 2.8E-88 T 22-04-2016 LK04_RS18130 fabfcbd4914d08b25d54be1a3680f5c4 244 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 59 235 1.2E-67 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 SUPERFAMILY SSF51735 9 240 1.83E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 Gene3D G3DSA:3.40.50.720 7 241 2.9E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 PANTHER PTHR24322 160 192 1.6E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 PANTHER PTHR24322 19 144 1.6E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 Pfam PF00106 short chain dehydrogenase 15 203 6.7E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 2.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS00290 c1677b47e6765401790d1580111a45d8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LK04_RS03350 3397dfad685d7598e39554d70be42d70 108 SUPERFAMILY SSF158452 4 105 1.96E-37 T 22-04-2016 IPR023376 YqcC-like domain LK04_RS03350 3397dfad685d7598e39554d70be42d70 108 PIRSF PIRSF006257 1 107 4.2E-38 T 22-04-2016 IPR007384 Protein of unknown function UCP006257 LK04_RS03350 3397dfad685d7598e39554d70be42d70 108 Gene3D G3DSA:1.20.1440.40 3 104 1.2E-37 T 22-04-2016 IPR023376 YqcC-like domain LK04_RS03350 3397dfad685d7598e39554d70be42d70 108 Pfam PF04287 tRNA pseudouridine synthase C 7 102 1.0E-33 T 22-04-2016 IPR023376 YqcC-like domain LK04_RS03350 3397dfad685d7598e39554d70be42d70 108 PANTHER PTHR39586 1 108 1.9E-38 T 22-04-2016 LK04_RS10040 5dc44c4391531073b43e928e01d5e4d5 332 Pfam PF00962 Adenosine/AMP deaminase 6 327 1.5E-92 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 LK04_RS10040 5dc44c4391531073b43e928e01d5e4d5 332 SUPERFAMILY SSF51556 5 326 4.33E-75 T 22-04-2016 IPR032466 Metal-dependent hydrolase LK04_RS10040 5dc44c4391531073b43e928e01d5e4d5 332 Gene3D G3DSA:3.20.20.140 5 330 7.6E-98 T 22-04-2016 LK04_RS10040 5dc44c4391531073b43e928e01d5e4d5 332 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.357 T 22-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 LK04_RS10040 5dc44c4391531073b43e928e01d5e4d5 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 1.7E-107 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 LK04_RS10040 5dc44c4391531073b43e928e01d5e4d5 332 PANTHER PTHR11409 2 331 3.3E-105 T 22-04-2016 LK04_RS05125 e25362b49c764ecd091c3431ef839c16 137 Pfam PF07409 Phage protein GP46 18 128 7.3E-38 T 22-04-2016 IPR010877 Bacteriophage Mu, Gp46 LK04_RS06095 20f848d42f50901238fba9c69604501c 420 PANTHER PTHR36836 1 82 7.4E-112 T 22-04-2016 LK04_RS06095 20f848d42f50901238fba9c69604501c 420 PANTHER PTHR36836 102 420 7.4E-112 T 22-04-2016 LK04_RS06095 20f848d42f50901238fba9c69604501c 420 PANTHER PTHR36836:SF1 1 82 7.4E-112 T 22-04-2016 LK04_RS06095 20f848d42f50901238fba9c69604501c 420 PANTHER PTHR36836:SF1 102 420 7.4E-112 T 22-04-2016 LK04_RS06095 20f848d42f50901238fba9c69604501c 420 Pfam PF04230 Polysaccharide pyruvyl transferase 13 353 1.4E-35 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase LK04_RS01620 0ac600984c01bff84071d05d2fc81e09 116 PANTHER PTHR30561 1 113 5.2E-67 T 22-04-2016 LK04_RS01620 0ac600984c01bff84071d05d2fc81e09 116 SUPERFAMILY SSF103481 6 105 5.62E-18 T 22-04-2016 LK04_RS01620 0ac600984c01bff84071d05d2fc81e09 116 Pfam PF00893 Small Multidrug Resistance protein 3 93 3.8E-26 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 LK04_RS01620 0ac600984c01bff84071d05d2fc81e09 116 PANTHER PTHR30561:SF2 1 113 5.2E-67 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 LK04_RS08985 9d8d835ab17cb9419d7df04a3428f694 480 PANTHER PTHR30365:SF0 1 465 3.9E-141 T 22-04-2016 LK04_RS08985 9d8d835ab17cb9419d7df04a3428f694 480 PIRSF PIRSF006446 4 464 9.8E-132 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LK04_RS08985 9d8d835ab17cb9419d7df04a3428f694 480 PANTHER PTHR30365 1 465 3.9E-141 T 22-04-2016 LK04_RS08985 9d8d835ab17cb9419d7df04a3428f694 480 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 11 446 7.9E-135 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LK04_RS00785 4473510f798444a5971bc012dd1011dd 183 PANTHER PTHR10204 5 174 1.7E-79 T 22-04-2016 LK04_RS00785 4473510f798444a5971bc012dd1011dd 183 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 182 48.75 T 22-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 LK04_RS00785 4473510f798444a5971bc012dd1011dd 183 Pfam PF02525 Flavodoxin-like fold 6 172 2.3E-40 T 22-04-2016 IPR003680 Flavodoxin-like fold LK04_RS00785 4473510f798444a5971bc012dd1011dd 183 SUPERFAMILY SSF52218 6 176 2.96E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS00785 4473510f798444a5971bc012dd1011dd 183 Gene3D G3DSA:3.40.50.360 6 176 3.8E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS00785 4473510f798444a5971bc012dd1011dd 183 PANTHER PTHR10204:SF42 5 174 1.7E-79 T 22-04-2016 LK04_RS00785 4473510f798444a5971bc012dd1011dd 183 Pfam PF16889 Heparinase II/III N-terminus 136 175 6.4E-5 T 22-04-2016 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 SMART SM00866 93 232 5.0E-29 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 8 237 1.9E-85 T 22-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 Gene3D G3DSA:1.10.10.10 6 79 1.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 PANTHER PTHR11751 122 145 1.2E-39 T 22-04-2016 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 PANTHER PTHR11751 1 75 1.2E-39 T 22-04-2016 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 Gene3D G3DSA:3.40.1410.10 80 236 9.0E-47 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 PANTHER PTHR11751:SF292 122 145 1.2E-39 T 22-04-2016 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 PANTHER PTHR11751:SF292 1 75 1.2E-39 T 22-04-2016 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 3.1E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.6E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.6E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 SMART SM00345 14 72 3.3E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 Pfam PF07702 UTRA domain 93 231 4.6E-33 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 SUPERFAMILY SSF46785 7 80 3.52E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS06635 33f3f00c9e7e09551f393c95cbb41faa 238 SUPERFAMILY SSF64288 60 236 3.3E-41 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LK04_RS05595 6b00630635bdf617cf38f86d28967f06 98 SUPERFAMILY SSF54909 1 94 7.28E-24 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LK04_RS05595 6b00630635bdf617cf38f86d28967f06 98 Gene3D G3DSA:3.30.70.900 3 89 2.5E-25 T 22-04-2016 LK04_RS05595 6b00630635bdf617cf38f86d28967f06 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 76 4.6E-17 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain LK04_RS05595 6b00630635bdf617cf38f86d28967f06 98 PANTHER PTHR33336:SF1 1 96 2.6E-45 T 22-04-2016 LK04_RS05595 6b00630635bdf617cf38f86d28967f06 98 PANTHER PTHR33336 1 96 2.6E-45 T 22-04-2016 LK04_RS04790 1f359bd3fb90d3b54faeaf61435af077 330 SUPERFAMILY SSF51430 13 328 2.62E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS04790 1f359bd3fb90d3b54faeaf61435af077 330 Pfam PF00248 Aldo/keto reductase family 28 328 4.2E-70 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS04790 1f359bd3fb90d3b54faeaf61435af077 330 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 126 136 8.0E-5 T 22-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related LK04_RS04790 1f359bd3fb90d3b54faeaf61435af077 330 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 284 297 8.0E-5 T 22-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related LK04_RS04790 1f359bd3fb90d3b54faeaf61435af077 330 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 271 283 8.0E-5 T 22-04-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related LK04_RS04790 1f359bd3fb90d3b54faeaf61435af077 330 PANTHER PTHR11732:SF191 13 329 7.7E-181 T 22-04-2016 LK04_RS04790 1f359bd3fb90d3b54faeaf61435af077 330 PANTHER PTHR11732 13 329 7.7E-181 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS04790 1f359bd3fb90d3b54faeaf61435af077 330 Gene3D G3DSA:3.20.20.100 12 328 1.0E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS06645 517f3c5dd57b349c5e08ee3e81c2b175 191 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 186 5.8E-55 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 LK04_RS06645 517f3c5dd57b349c5e08ee3e81c2b175 191 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 189 6.7E-61 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 LK04_RS06645 517f3c5dd57b349c5e08ee3e81c2b175 191 SUPERFAMILY SSF159709 13 190 3.14E-56 T 22-04-2016 LK04_RS06645 517f3c5dd57b349c5e08ee3e81c2b175 191 PIRSF PIRSF020680 1 191 1.9E-57 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 LK04_RS12185 a4c2935e98e47902c303b0f5a51f50ae 546 Gene3D G3DSA:3.40.50.300 1 337 1.1E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12185 a4c2935e98e47902c303b0f5a51f50ae 546 SUPERFAMILY SSF52540 1 213 6.88E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12185 a4c2935e98e47902c303b0f5a51f50ae 546 SUPERFAMILY SSF52540 248 327 6.88E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12185 a4c2935e98e47902c303b0f5a51f50ae 546 PANTHER PTHR32182 1 545 5.4E-174 T 22-04-2016 LK04_RS12185 a4c2935e98e47902c303b0f5a51f50ae 546 Pfam PF11398 Protein of unknown function (DUF2813) 1 370 2.3E-120 T 22-04-2016 IPR022602 Protein of unknown function DUF2813 LK04_RS12185 a4c2935e98e47902c303b0f5a51f50ae 546 PANTHER PTHR32182:SF12 1 545 5.4E-174 T 22-04-2016 LK04_RS14875 4033e6e048627d68ead21c5270acbeb1 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 25.98 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 LK04_RS14875 4033e6e048627d68ead21c5270acbeb1 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 4.0E-35 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 LK04_RS14875 4033e6e048627d68ead21c5270acbeb1 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 5.0E-24 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 LK04_RS06460 5d5aafd986c1dfc1d0fd2026943fe6dd 275 PANTHER PTHR11183 145 271 1.9E-71 T 22-04-2016 LK04_RS06460 5d5aafd986c1dfc1d0fd2026943fe6dd 275 PANTHER PTHR11183 3 112 1.9E-71 T 22-04-2016 LK04_RS06460 5d5aafd986c1dfc1d0fd2026943fe6dd 275 SUPERFAMILY SSF53448 4 269 7.59E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06460 5d5aafd986c1dfc1d0fd2026943fe6dd 275 PANTHER PTHR11183:SF3 145 271 1.9E-71 T 22-04-2016 LK04_RS06460 5d5aafd986c1dfc1d0fd2026943fe6dd 275 PANTHER PTHR11183:SF3 3 112 1.9E-71 T 22-04-2016 LK04_RS06460 5d5aafd986c1dfc1d0fd2026943fe6dd 275 Pfam PF01501 Glycosyl transferase family 8 6 250 4.4E-21 T 22-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 LK04_RS06460 5d5aafd986c1dfc1d0fd2026943fe6dd 275 Gene3D G3DSA:3.90.550.10 2 131 1.1E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS06460 5d5aafd986c1dfc1d0fd2026943fe6dd 275 Gene3D G3DSA:3.90.550.10 164 272 1.1E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS17160 074120206d568ab22198d068e9f265c7 433 PANTHER PTHR11958 1 430 6.0E-242 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 4.2E-118 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 1.8E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.8E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 1.8E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.8E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 1.8E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.8E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 1.8E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 1.8E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 SUPERFAMILY SSF118215 8 412 1.44E-122 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 PANTHER PTHR11958:SF26 1 430 6.0E-242 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS17160 074120206d568ab22198d068e9f265c7 433 Gene3D G3DSA:1.10.3860.10 4 416 7.1E-130 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 PIRSF PIRSF001415 1 324 5.1E-145 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 8 321 1.0E-134 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 SMART SM01004 5 323 7.7E-208 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 Gene3D G3DSA:3.20.20.70 5 321 6.5E-138 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 PANTHER PTHR11458:SF1 5 321 1.8E-240 T 22-04-2016 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 SUPERFAMILY SSF51569 6 321 1.03E-129 T 22-04-2016 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 191 210 3.7E-55 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 297 316 3.7E-55 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 242 258 3.7E-55 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 267 282 3.7E-55 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 3.7E-55 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 123 137 3.7E-55 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 242 254 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS00385 b58d6619617dcdde031bd1d2488758d6 325 PANTHER PTHR11458 5 321 1.8E-240 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LK04_RS02710 05ab09e3e6156b06564db320808a878b 184 PANTHER PTHR33219 3 184 5.6E-81 T 22-04-2016 LK04_RS02710 05ab09e3e6156b06564db320808a878b 184 Pfam PF02325 YGGT family 10 76 8.1E-22 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 LK04_RS02710 05ab09e3e6156b06564db320808a878b 184 Pfam PF02325 YGGT family 108 170 8.1E-18 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 LK04_RS02710 05ab09e3e6156b06564db320808a878b 184 PANTHER PTHR33219:SF5 3 184 5.6E-81 T 22-04-2016 LK04_RS12990 c072659e4f3e89ce1eb90795ddb9cff1 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 25 341 2.7E-122 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 LK04_RS12990 c072659e4f3e89ce1eb90795ddb9cff1 353 SUPERFAMILY SSF142754 29 341 2.35E-106 T 22-04-2016 LK04_RS12990 c072659e4f3e89ce1eb90795ddb9cff1 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 7.1E-102 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 LK04_RS12990 c072659e4f3e89ce1eb90795ddb9cff1 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 70.296 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 LK04_RS12990 c072659e4f3e89ce1eb90795ddb9cff1 353 PANTHER PTHR30573 1 352 2.5E-168 T 22-04-2016 LK04_RS01635 df26462e7dea0be1d8061a2bbed5b95f 136 PANTHER PTHR33452 1 126 1.2E-77 T 22-04-2016 LK04_RS01635 df26462e7dea0be1d8061a2bbed5b95f 136 Pfam PF07681 DoxX 8 87 8.1E-19 T 22-04-2016 IPR032808 DoxX family LK04_RS01635 df26462e7dea0be1d8061a2bbed5b95f 136 PANTHER PTHR33452:SF8 1 126 1.2E-77 T 22-04-2016 LK04_RS14225 fc51ce71be569b8e23df5b77ae94702d 334 Pfam PF01636 Phosphotransferase enzyme family 40 270 4.7E-29 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase LK04_RS14225 fc51ce71be569b8e23df5b77ae94702d 334 Gene3D G3DSA:3.30.200.20 39 101 1.6E-6 T 22-04-2016 LK04_RS14225 fc51ce71be569b8e23df5b77ae94702d 334 SUPERFAMILY SSF56112 20 327 1.59E-56 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS14225 fc51ce71be569b8e23df5b77ae94702d 334 PANTHER PTHR21064 32 292 1.7E-28 T 22-04-2016 LK04_RS14225 fc51ce71be569b8e23df5b77ae94702d 334 Gene3D G3DSA:3.90.1200.10 123 327 5.2E-24 T 22-04-2016 LK04_RS15260 38dfd4927b013569b03ddf5d85a00bc7 331 PANTHER PTHR11732:SF215 1 331 3.8E-136 T 22-04-2016 LK04_RS15260 38dfd4927b013569b03ddf5d85a00bc7 331 PANTHER PTHR11732 1 331 3.8E-136 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LK04_RS15260 38dfd4927b013569b03ddf5d85a00bc7 331 Gene3D G3DSA:3.20.20.100 1 323 6.0E-110 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS15260 38dfd4927b013569b03ddf5d85a00bc7 331 Pfam PF00248 Aldo/keto reductase family 16 310 5.8E-72 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS15260 38dfd4927b013569b03ddf5d85a00bc7 331 SUPERFAMILY SSF51430 1 311 2.49E-95 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LK04_RS03650 52b74a7bcf3b6a956806fae28bfa415d 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03650 52b74a7bcf3b6a956806fae28bfa415d 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.165 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03650 52b74a7bcf3b6a956806fae28bfa415d 82 Gene3D G3DSA:3.30.1320.10 1 79 3.9E-33 T 22-04-2016 IPR023803 Ribosomal protein S16 domain LK04_RS03650 52b74a7bcf3b6a956806fae28bfa415d 82 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03650 52b74a7bcf3b6a956806fae28bfa415d 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.4E-29 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS03650 52b74a7bcf3b6a956806fae28bfa415d 82 SUPERFAMILY SSF54565 1 79 1.44E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain LK04_RS03650 52b74a7bcf3b6a956806fae28bfa415d 82 PANTHER PTHR12919 1 78 4.3E-41 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS04435 3a5083ff009c1853d7c67a791fa4b122 289 PANTHER PTHR30168 2 289 6.3E-145 T 22-04-2016 LK04_RS04435 3a5083ff009c1853d7c67a791fa4b122 289 Pfam PF04228 Putative neutral zinc metallopeptidase 1 286 1.4E-134 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative LK04_RS18275 3fe77e1c4e7d2b4dd1322caf9473107e 243 PANTHER PTHR13696 1 235 8.6E-16 T 22-04-2016 LK04_RS18275 3fe77e1c4e7d2b4dd1322caf9473107e 243 Gene3D G3DSA:3.40.50.300 1 236 6.8E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS18275 3fe77e1c4e7d2b4dd1322caf9473107e 243 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 238 6.5E-70 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ LK04_RS18275 3fe77e1c4e7d2b4dd1322caf9473107e 243 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 235 3.5E-97 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ LK04_RS18275 3fe77e1c4e7d2b4dd1322caf9473107e 243 SUPERFAMILY SSF52540 1 235 3.99E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10000 97f8026ffd2a56ec2fd3fb89009a7c26 188 Pfam PF11185 Protein of unknown function (DUF2971) 1 109 9.2E-6 T 22-04-2016 IPR021352 Protein of unknown function DUF2971 LK04_RS12255 93c78427906f26089f0cf9a3c70d52ca 281 PANTHER PTHR30222:SF1 15 279 7.5E-83 T 22-04-2016 LK04_RS12255 93c78427906f26089f0cf9a3c70d52ca 281 PANTHER PTHR30222 15 279 7.5E-83 T 22-04-2016 LK04_RS12255 93c78427906f26089f0cf9a3c70d52ca 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 265 1.4E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12255 93c78427906f26089f0cf9a3c70d52ca 281 SUPERFAMILY SSF161098 8 265 1.5E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12255 93c78427906f26089f0cf9a3c70d52ca 281 Gene3D G3DSA:1.10.3720.10 11 270 5.3E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05705 0be22f6995946843714d719064411291 396 Gene3D G3DSA:1.20.1250.20 12 194 2.3E-32 T 22-04-2016 LK04_RS05705 0be22f6995946843714d719064411291 396 PANTHER PTHR23502 11 392 7.2E-192 T 22-04-2016 LK04_RS05705 0be22f6995946843714d719064411291 396 Gene3D G3DSA:1.20.1250.20 196 391 1.2E-10 T 22-04-2016 LK04_RS05705 0be22f6995946843714d719064411291 396 PANTHER PTHR23502:SF39 11 392 7.2E-192 T 22-04-2016 LK04_RS05705 0be22f6995946843714d719064411291 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 390 1.5E-140 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 LK04_RS05705 0be22f6995946843714d719064411291 396 SUPERFAMILY SSF103473 11 394 1.83E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS05705 0be22f6995946843714d719064411291 396 Pfam PF07690 Major Facilitator Superfamily 16 358 1.2E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS00235 c4ecb5e61864643314ccb9c67fb38a88 449 Pfam PF00999 Sodium/hydrogen exchanger family 14 269 1.6E-28 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LK04_RS00235 c4ecb5e61864643314ccb9c67fb38a88 449 Pfam PF00999 Sodium/hydrogen exchanger family 331 435 3.8E-10 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LK04_RS00235 c4ecb5e61864643314ccb9c67fb38a88 449 PANTHER PTHR32507:SF12 312 443 1.6E-103 T 22-04-2016 LK04_RS00235 c4ecb5e61864643314ccb9c67fb38a88 449 PANTHER PTHR32507:SF12 1 269 1.6E-103 T 22-04-2016 LK04_RS00235 c4ecb5e61864643314ccb9c67fb38a88 449 PANTHER PTHR32507 312 443 1.6E-103 T 22-04-2016 LK04_RS00235 c4ecb5e61864643314ccb9c67fb38a88 449 PANTHER PTHR32507 1 269 1.6E-103 T 22-04-2016 LK04_RS04975 318f54e37f541077cac23329a89aa7e6 136 SUPERFAMILY SSF46785 4 50 5.87E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02175 f1a6af4eddbbccbf97313d3c8e2de573 479 PIRSF PIRSF005522 1 478 9.1E-237 T 22-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 LK04_RS02175 f1a6af4eddbbccbf97313d3c8e2de573 479 Pfam PF14403 Circularly permuted ATP-grasp type 2 78 451 1.6E-162 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 LK04_RS02175 f1a6af4eddbbccbf97313d3c8e2de573 479 PANTHER PTHR34595 1 476 4.2E-291 T 22-04-2016 LK04_RS02175 f1a6af4eddbbccbf97313d3c8e2de573 479 SUPERFAMILY SSF56059 20 216 1.13E-65 T 22-04-2016 LK04_RS02175 f1a6af4eddbbccbf97313d3c8e2de573 479 SUPERFAMILY SSF56059 321 466 1.13E-65 T 22-04-2016 LK04_RS02175 f1a6af4eddbbccbf97313d3c8e2de573 479 PANTHER PTHR34595:SF3 1 476 4.2E-291 T 22-04-2016 LK04_RS18325 a907f5bc21dbec3fdc152e0734a56c4e 245 Pfam PF17037 Cellulose biosynthesis protein BcsO 1 140 1.4E-17 T 22-04-2016 IPR031484 Cellulose biosynthesis protein BcsO LK04_RS18325 a907f5bc21dbec3fdc152e0734a56c4e 245 Pfam PF17037 Cellulose biosynthesis protein BcsO 95 245 1.3E-8 T 22-04-2016 IPR031484 Cellulose biosynthesis protein BcsO LK04_RS19710 989bcd5252de386407d54ae688277221 283 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 89 97 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS19710 989bcd5252de386407d54ae688277221 283 Gene3D G3DSA:3.40.50.1860 23 191 4.6E-47 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS19710 989bcd5252de386407d54ae688277221 283 PANTHER PTHR21198:SF2 15 283 1.0E-106 T 22-04-2016 LK04_RS19710 989bcd5252de386407d54ae688277221 283 Pfam PF01177 Asp/Glu/Hydantoin racemase 26 235 2.2E-23 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS19710 989bcd5252de386407d54ae688277221 283 Hamap MF_00258 Glutamate racemase [murI]. 22 274 34.276 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS19710 989bcd5252de386407d54ae688277221 283 SUPERFAMILY SSF53681 24 125 2.94E-30 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS19710 989bcd5252de386407d54ae688277221 283 SUPERFAMILY SSF53681 127 280 1.59E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS19710 989bcd5252de386407d54ae688277221 283 PANTHER PTHR21198 15 283 1.0E-106 T 22-04-2016 LK04_RS19710 989bcd5252de386407d54ae688277221 283 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS19710 989bcd5252de386407d54ae688277221 283 TIGRFAM TIGR00067 glut_race: glutamate racemase 24 270 2.4E-83 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LK04_RS15735 e2852b061bf1747a1fb5d90984225b65 334 Pfam PF13384 Homeodomain-like domain 28 72 1.4E-8 T 22-04-2016 LK04_RS15735 e2852b061bf1747a1fb5d90984225b65 334 Pfam PF13358 DDE superfamily endonuclease 168 308 8.3E-24 T 22-04-2016 LK04_RS15735 e2852b061bf1747a1fb5d90984225b65 334 SUPERFAMILY SSF46689 23 130 4.12E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS02520 504655fa7ba9f2d8cf925c0e2acfbf7b 302 SUPERFAMILY SSF46785 3 88 1.17E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02520 504655fa7ba9f2d8cf925c0e2acfbf7b 302 PANTHER PTHR30126:SF4 3 300 1.4E-121 T 22-04-2016 LK04_RS02520 504655fa7ba9f2d8cf925c0e2acfbf7b 302 PANTHER PTHR30126 3 300 1.4E-121 T 22-04-2016 LK04_RS02520 504655fa7ba9f2d8cf925c0e2acfbf7b 302 Pfam PF03466 LysR substrate binding domain 90 290 2.8E-28 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS02520 504655fa7ba9f2d8cf925c0e2acfbf7b 302 Gene3D G3DSA:3.40.190.10 90 181 6.6E-16 T 22-04-2016 LK04_RS02520 504655fa7ba9f2d8cf925c0e2acfbf7b 302 Gene3D G3DSA:3.40.190.10 182 256 9.0E-11 T 22-04-2016 LK04_RS02520 504655fa7ba9f2d8cf925c0e2acfbf7b 302 Gene3D G3DSA:1.10.10.10 3 86 1.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02520 504655fa7ba9f2d8cf925c0e2acfbf7b 302 SUPERFAMILY SSF53850 90 292 1.02E-30 T 22-04-2016 LK04_RS02520 504655fa7ba9f2d8cf925c0e2acfbf7b 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.9E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS05880 a9735de1af5b0adbd3bab6aa7f5916e6 127 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 22.36 T 22-04-2016 IPR022957 Uncharacterised protein family UPF0299 LK04_RS05880 a9735de1af5b0adbd3bab6aa7f5916e6 127 PANTHER PTHR33931 3 124 2.9E-46 T 22-04-2016 LK04_RS05880 a9735de1af5b0adbd3bab6aa7f5916e6 127 PANTHER PTHR33931:SF2 3 124 2.9E-46 T 22-04-2016 LK04_RS05880 a9735de1af5b0adbd3bab6aa7f5916e6 127 Pfam PF03788 LrgA family 23 113 7.7E-28 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 LK04_RS09100 e05e6cb8987322fa2b16e8976420c027 269 Gene3D G3DSA:3.20.20.150 3 257 1.2E-23 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS09100 e05e6cb8987322fa2b16e8976420c027 269 Pfam PF01261 Xylose isomerase-like TIM barrel 30 198 3.9E-13 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS09100 e05e6cb8987322fa2b16e8976420c027 269 SUPERFAMILY SSF51658 15 263 1.99E-26 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LK04_RS07935 3efba65af4bf316db471b73597d47c6b 397 PANTHER PTHR23502 4 382 2.6E-103 T 22-04-2016 LK04_RS07935 3efba65af4bf316db471b73597d47c6b 397 Gene3D G3DSA:1.20.1250.20 202 383 5.2E-7 T 22-04-2016 LK04_RS07935 3efba65af4bf316db471b73597d47c6b 397 Gene3D G3DSA:1.20.1250.20 5 183 2.9E-30 T 22-04-2016 LK04_RS07935 3efba65af4bf316db471b73597d47c6b 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 378 5.7E-70 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 LK04_RS07935 3efba65af4bf316db471b73597d47c6b 397 SUPERFAMILY SSF103473 5 383 3.92E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS07935 3efba65af4bf316db471b73597d47c6b 397 Pfam PF07690 Major Facilitator Superfamily 9 355 1.2E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS07935 3efba65af4bf316db471b73597d47c6b 397 PANTHER PTHR23502:SF19 4 382 2.6E-103 T 22-04-2016 LK04_RS07935 3efba65af4bf316db471b73597d47c6b 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS16210 05ee4ed2bc66e75475635b37385cd14d 224 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 11 216 3.7E-35 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 LK04_RS16210 05ee4ed2bc66e75475635b37385cd14d 224 PANTHER PTHR33508 1 224 1.5E-122 T 22-04-2016 LK04_RS16210 05ee4ed2bc66e75475635b37385cd14d 224 PANTHER PTHR33508:SF2 1 224 1.5E-122 T 22-04-2016 LK04_RS16210 05ee4ed2bc66e75475635b37385cd14d 224 Pfam PF01914 MarC family integral membrane protein 5 219 1.3E-63 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 LK04_RS11525 a707102a0c968979f00ca52f4bb54881 374 PANTHER PTHR36927 7 373 1.1E-53 T 22-04-2016 LK04_RS11525 a707102a0c968979f00ca52f4bb54881 374 Pfam PF01757 Acyltransferase family 10 354 4.0E-32 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LK04_RS00230 ed0f8975fd412a3ed65e841744f92a1c 402 Pfam PF07690 Major Facilitator Superfamily 25 330 6.8E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS00230 ed0f8975fd412a3ed65e841744f92a1c 402 PANTHER PTHR23501:SF79 15 399 4.3E-103 T 22-04-2016 LK04_RS00230 ed0f8975fd412a3ed65e841744f92a1c 402 SUPERFAMILY SSF103473 15 396 2.22E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS00230 ed0f8975fd412a3ed65e841744f92a1c 402 Gene3D G3DSA:1.20.1250.20 20 196 6.4E-20 T 22-04-2016 LK04_RS00230 ed0f8975fd412a3ed65e841744f92a1c 402 Gene3D G3DSA:1.20.1250.20 219 396 2.9E-15 T 22-04-2016 LK04_RS00230 ed0f8975fd412a3ed65e841744f92a1c 402 PANTHER PTHR23501 15 399 4.3E-103 T 22-04-2016 LK04_RS19410 97415c1da23ca89eafd211095f8e9ac9 424 Pfam PF00534 Glycosyl transferases group 1 236 398 3.0E-11 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LK04_RS19410 97415c1da23ca89eafd211095f8e9ac9 424 SUPERFAMILY SSF53756 57 417 1.26E-13 T 22-04-2016 LK04_RS19410 97415c1da23ca89eafd211095f8e9ac9 424 PANTHER PTHR23417 189 424 3.6E-147 T 22-04-2016 LK04_RS19410 97415c1da23ca89eafd211095f8e9ac9 424 PANTHER PTHR23417 129 139 3.6E-147 T 22-04-2016 LK04_RS19410 97415c1da23ca89eafd211095f8e9ac9 424 PANTHER PTHR23417 1 110 3.6E-147 T 22-04-2016 LK04_RS19410 97415c1da23ca89eafd211095f8e9ac9 424 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 32 210 5.2E-66 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 LK04_RS19410 97415c1da23ca89eafd211095f8e9ac9 424 PANTHER PTHR23417:SF2 189 424 3.6E-147 T 22-04-2016 LK04_RS19410 97415c1da23ca89eafd211095f8e9ac9 424 PANTHER PTHR23417:SF2 129 139 3.6E-147 T 22-04-2016 LK04_RS19410 97415c1da23ca89eafd211095f8e9ac9 424 PANTHER PTHR23417:SF2 1 110 3.6E-147 T 22-04-2016 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR00701 60kDa inner membrane protein signature 499 522 1.8E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR00701 60kDa inner membrane protein signature 415 438 1.8E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR00701 60kDa inner membrane protein signature 251 266 1.8E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR00701 60kDa inner membrane protein signature 66 87 1.8E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR00701 60kDa inner membrane protein signature 324 344 1.8E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.8E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR00701 60kDa inner membrane protein signature 217 235 1.8E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR00701 60kDa inner membrane protein signature 462 484 1.8E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR00701 60kDa inner membrane protein signature 158 178 1.8E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PANTHER PTHR12428 165 548 2.9E-151 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 Pfam PF14849 YidC periplasmic domain 60 343 3.2E-91 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 5.5E-119 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 26.578 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 Pfam PF02096 60Kd inner membrane protein 354 533 4.4E-60 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 1.5E-69 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 1.5E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 1.5E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 1.5E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LK04_RS18750 6f8ebb5d70fdafd9d912765f35e8d934 548 PANTHER PTHR12428:SF14 165 548 2.9E-151 T 22-04-2016 LK04_RS02915 cefc5f79487f8b1ebb5494cbc82d9fd9 242 PANTHER PTHR34387 5 242 1.9E-64 T 22-04-2016 LK04_RS02915 cefc5f79487f8b1ebb5494cbc82d9fd9 242 Pfam PF04402 Protein of unknown function (DUF541) 34 235 1.5E-45 T 22-04-2016 IPR007497 Protein of unknown function DUF541 LK04_RS02915 cefc5f79487f8b1ebb5494cbc82d9fd9 242 PANTHER PTHR34387:SF1 5 242 1.9E-64 T 22-04-2016 LK04_RS09935 e995a6f3c77152c21499abd8892aa6e1 90 Pfam PF05269 Bacteriophage CII protein 1 88 3.7E-11 T 22-04-2016 IPR007933 Transcription activator CII GO:0003677|GO:0006355 LK04_RS09935 e995a6f3c77152c21499abd8892aa6e1 90 Gene3D G3DSA:1.10.8.320 2 74 4.0E-8 T 22-04-2016 LK04_RS18980 297b36e255bbc06726806c8e5f86542e 320 PANTHER PTHR30425 13 319 9.2E-158 T 22-04-2016 LK04_RS18980 297b36e255bbc06726806c8e5f86542e 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 307 7.9E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18980 297b36e255bbc06726806c8e5f86542e 320 SUPERFAMILY SSF161098 29 304 1.68E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18980 297b36e255bbc06726806c8e5f86542e 320 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 2.5E-94 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 LK04_RS18980 297b36e255bbc06726806c8e5f86542e 320 Gene3D G3DSA:1.10.3720.10 28 315 2.7E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS18980 297b36e255bbc06726806c8e5f86542e 320 PANTHER PTHR30425:SF1 13 319 9.2E-158 T 22-04-2016 LK04_RS17190 d27048e3befd9d5bba3756fe523cd781 231 Pfam PF04172 LrgB-like family 14 226 1.7E-67 T 22-04-2016 IPR007300 CidB/LrgB family LK04_RS17190 d27048e3befd9d5bba3756fe523cd781 231 PANTHER PTHR30249:SF4 1 229 8.4E-124 T 22-04-2016 LK04_RS17190 d27048e3befd9d5bba3756fe523cd781 231 PANTHER PTHR30249 1 229 8.4E-124 T 22-04-2016 LK04_RS13720 ef96be3cb486f522383466412cf5e6ff 152 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 147 3.3E-23 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain LK04_RS13720 ef96be3cb486f522383466412cf5e6ff 152 PANTHER PTHR33507:SF3 1 150 6.9E-45 T 22-04-2016 LK04_RS13720 ef96be3cb486f522383466412cf5e6ff 152 PANTHER PTHR33507 1 150 6.9E-45 T 22-04-2016 LK04_RS13720 ef96be3cb486f522383466412cf5e6ff 152 Gene3D G3DSA:2.40.50.140 93 147 1.2E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LK04_RS14325 541412bfb979ab198b6478ebb1641a04 83 Pfam PF10798 Biofilm development protein YmgB/AriR 26 75 2.5E-11 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 LK04_RS13355 62d784ca327454c4537e8739c1c3a5bf 199 PANTHER PTHR38098 1 168 1.8E-57 T 22-04-2016 LK04_RS13355 62d784ca327454c4537e8739c1c3a5bf 199 Pfam PF04390 Lipopolysaccharide-assembly 11 161 2.7E-23 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 LK04_RS13355 62d784ca327454c4537e8739c1c3a5bf 199 PANTHER PTHR38098:SF1 1 168 1.8E-57 T 22-04-2016 LK04_RS13355 62d784ca327454c4537e8739c1c3a5bf 199 Gene3D G3DSA:3.30.160.150 20 173 1.3E-59 T 22-04-2016 LK04_RS13355 62d784ca327454c4537e8739c1c3a5bf 199 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 166 26.128 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 LK04_RS11030 352fffeb8915e12c4bb2438cdc6e99b1 203 PIRSF PIRSF033535 4 202 2.2E-29 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein LK04_RS11030 352fffeb8915e12c4bb2438cdc6e99b1 203 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 12 196 1.5E-23 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein LK04_RS11030 352fffeb8915e12c4bb2438cdc6e99b1 203 SUPERFAMILY SSF141318 48 187 1.57E-22 T 22-04-2016 LK04_RS19025 97d0fa83a15cce84b8ea04ec26088fda 156 Gene3D G3DSA:1.20.5.620 62 122 4.2E-26 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain LK04_RS19025 97d0fa83a15cce84b8ea04ec26088fda 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 2.8E-38 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LK04_RS19025 97d0fa83a15cce84b8ea04ec26088fda 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.076 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LK04_RS19025 97d0fa83a15cce84b8ea04ec26088fda 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 9.9E-60 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 LK04_RS19025 97d0fa83a15cce84b8ea04ec26088fda 156 SUPERFAMILY SSF81573 63 121 2.09E-15 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain LK04_RS19025 97d0fa83a15cce84b8ea04ec26088fda 156 PANTHER PTHR33445 1 156 1.6E-47 T 22-04-2016 LK04_RS04605 a21a265f92b08154654b0c8c94dd5b76 206 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 40 204 2.0E-52 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 LK04_RS04605 a21a265f92b08154654b0c8c94dd5b76 206 Gene3D G3DSA:2.60.460.10 42 206 8.7E-71 T 22-04-2016 LK04_RS04605 a21a265f92b08154654b0c8c94dd5b76 206 Pfam PF06572 Protein of unknown function (DUF1131) 40 206 3.7E-74 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 LK04_RS05145 ad5e2c9575096ff1925b336e1018ae59 141 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 31 138 2.2E-23 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly LK04_RS16875 5b03fe4709a80577a4982025b36f1d82 345 PANTHER PTHR22604:SF105 20 336 1.4E-77 T 22-04-2016 LK04_RS16875 5b03fe4709a80577a4982025b36f1d82 345 Gene3D G3DSA:3.40.50.720 19 159 6.5E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16875 5b03fe4709a80577a4982025b36f1d82 345 SUPERFAMILY SSF51735 19 165 2.06E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain LK04_RS16875 5b03fe4709a80577a4982025b36f1d82 345 SUPERFAMILY SSF55347 145 306 6.05E-28 T 22-04-2016 LK04_RS16875 5b03fe4709a80577a4982025b36f1d82 345 PANTHER PTHR22604 20 336 1.4E-77 T 22-04-2016 LK04_RS16875 5b03fe4709a80577a4982025b36f1d82 345 Gene3D G3DSA:3.30.360.10 160 342 9.9E-39 T 22-04-2016 LK04_RS16875 5b03fe4709a80577a4982025b36f1d82 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 20 135 2.0E-24 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LK04_RS14605 bf1796b059376a8b9696eae9e9f9b63f 356 SUPERFAMILY SSF53822 38 307 1.77E-41 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS14605 bf1796b059376a8b9696eae9e9f9b63f 356 Gene3D G3DSA:3.40.50.2300 34 158 1.1E-19 T 22-04-2016 LK04_RS14605 bf1796b059376a8b9696eae9e9f9b63f 356 Gene3D G3DSA:3.40.50.2300 159 291 2.8E-19 T 22-04-2016 LK04_RS14605 bf1796b059376a8b9696eae9e9f9b63f 356 Pfam PF13407 Periplasmic binding protein domain 51 298 1.4E-27 T 22-04-2016 IPR025997 Periplasmic binding protein LK04_RS05565 9220121d111cddc83bdfe45be40f8987 102 PANTHER PTHR35893:SF1 1 102 2.6E-60 T 22-04-2016 LK04_RS05565 9220121d111cddc83bdfe45be40f8987 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 10 102 2.6E-28 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB LK04_RS05565 9220121d111cddc83bdfe45be40f8987 102 PANTHER PTHR35893 1 102 2.6E-60 T 22-04-2016 LK04_RS04540 0611c167bed9cca0ca16b61dd1ab6abb 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 312 7.5E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS04540 0611c167bed9cca0ca16b61dd1ab6abb 329 PANTHER PTHR32196:SF35 5 323 1.2E-112 T 22-04-2016 LK04_RS04540 0611c167bed9cca0ca16b61dd1ab6abb 329 PANTHER PTHR32196 5 323 1.2E-112 T 22-04-2016 LK04_RS03065 78d88062890807ee2c6dfcd4c65acf71 210 Pfam PF09347 Domain of unknown function (DUF1989) 7 170 1.4E-52 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 LK04_RS03065 78d88062890807ee2c6dfcd4c65acf71 210 PANTHER PTHR31527 6 197 7.8E-44 T 22-04-2016 LK04_RS03065 78d88062890807ee2c6dfcd4c65acf71 210 PANTHER PTHR31527:SF0 6 197 7.8E-44 T 22-04-2016 LK04_RS09555 0383c13dae933e754b669f1be17781f4 251 Gene3D G3DSA:1.20.910.10 4 250 4.1E-122 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LK04_RS09555 0383c13dae933e754b669f1be17781f4 251 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 251 135.396 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 LK04_RS09555 0383c13dae933e754b669f1be17781f4 251 Pfam PF03070 TENA/THI-4/PQQC family 14 223 2.6E-64 T 22-04-2016 IPR004305 Thiaminase-2/PQQC LK04_RS09555 0383c13dae933e754b669f1be17781f4 251 SUPERFAMILY SSF48613 5 248 1.11E-75 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LK04_RS09555 0383c13dae933e754b669f1be17781f4 251 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 7 241 4.7E-118 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 LK04_RS09555 0383c13dae933e754b669f1be17781f4 251 PANTHER PTHR40279 5 250 1.8E-132 T 22-04-2016 LK04_RS09555 0383c13dae933e754b669f1be17781f4 251 PANTHER PTHR40279:SF2 5 250 1.8E-132 T 22-04-2016 LK04_RS12745 e54ca25efcd74001ee993a2fd0e42310 191 PANTHER PTHR30353:SF8 1 190 2.4E-70 T 22-04-2016 LK04_RS12745 e54ca25efcd74001ee993a2fd0e42310 191 PANTHER PTHR30353 1 190 2.4E-70 T 22-04-2016 IPR032818 DedA family LK04_RS12745 e54ca25efcd74001ee993a2fd0e42310 191 Pfam PF09335 SNARE associated Golgi protein 25 145 8.3E-19 T 22-04-2016 IPR032816 SNARE associated Golgi protein LK04_RS01965 730ff155df821427036d9c722dd546c5 261 PANTHER PTHR30096:SF0 1 261 2.3E-99 T 22-04-2016 LK04_RS01965 730ff155df821427036d9c722dd546c5 261 Gene3D G3DSA:3.40.830.10 2 261 2.3E-98 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LK04_RS01965 730ff155df821427036d9c722dd546c5 261 PIRSF PIRSF006157 1 261 5.8E-92 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 LK04_RS01965 730ff155df821427036d9c722dd546c5 261 PANTHER PTHR30096 1 261 2.3E-99 T 22-04-2016 LK04_RS01965 730ff155df821427036d9c722dd546c5 261 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 257 2.9E-30 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LK04_RS01965 730ff155df821427036d9c722dd546c5 261 SUPERFAMILY SSF53213 5 261 4.19E-91 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LK04_RS05545 513c002581bb0d2892e1a9f89a61b1cb 506 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 496 2.2E-183 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 LK04_RS05545 513c002581bb0d2892e1a9f89a61b1cb 506 PANTHER PTHR22773:SF40 1 506 4.7E-194 T 22-04-2016 LK04_RS05545 513c002581bb0d2892e1a9f89a61b1cb 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 5.9E-40 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 LK04_RS05545 513c002581bb0d2892e1a9f89a61b1cb 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 5.9E-40 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 LK04_RS05545 513c002581bb0d2892e1a9f89a61b1cb 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 5.9E-40 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 LK04_RS05545 513c002581bb0d2892e1a9f89a61b1cb 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 5.9E-40 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 LK04_RS05545 513c002581bb0d2892e1a9f89a61b1cb 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 5.9E-40 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 LK04_RS05545 513c002581bb0d2892e1a9f89a61b1cb 506 Pfam PF00361 Proton-conducting membrane transporter 134 431 6.1E-70 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 LK04_RS05545 513c002581bb0d2892e1a9f89a61b1cb 506 PANTHER PTHR22773 1 506 4.7E-194 T 22-04-2016 LK04_RS18215 7ea75a6c718c0f7fd9fb9eed127fce95 93 PANTHER PTHR10657 4 92 2.6E-36 T 22-04-2016 LK04_RS18215 7ea75a6c718c0f7fd9fb9eed127fce95 93 SUPERFAMILY SSF54534 5 90 2.09E-29 T 22-04-2016 LK04_RS18215 7ea75a6c718c0f7fd9fb9eed127fce95 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 2.0E-22 T 22-04-2016 LK04_RS18215 7ea75a6c718c0f7fd9fb9eed127fce95 93 Gene3D G3DSA:3.10.50.40 5 90 1.2E-34 T 22-04-2016 LK04_RS06765 c16a6cfd7ce49b638ee3eecccd66194c 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 282 295 2.8E-29 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS06765 c16a6cfd7ce49b638ee3eecccd66194c 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 28 44 2.8E-29 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS06765 c16a6cfd7ce49b638ee3eecccd66194c 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 332 347 2.8E-29 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS06765 c16a6cfd7ce49b638ee3eecccd66194c 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 69 87 2.8E-29 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS06765 c16a6cfd7ce49b638ee3eecccd66194c 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 50 66 2.8E-29 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS06765 c16a6cfd7ce49b638ee3eecccd66194c 371 PANTHER PTHR30483 5 371 1.4E-121 T 22-04-2016 LK04_RS06765 c16a6cfd7ce49b638ee3eecccd66194c 371 SUPERFAMILY SSF53822 27 368 9.42E-95 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LK04_RS06765 c16a6cfd7ce49b638ee3eecccd66194c 371 PANTHER PTHR30483:SF20 5 371 1.4E-121 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LK04_RS06765 c16a6cfd7ce49b638ee3eecccd66194c 371 Gene3D G3DSA:3.40.50.2300 27 227 2.2E-73 T 22-04-2016 LK04_RS06765 c16a6cfd7ce49b638ee3eecccd66194c 371 Pfam PF13458 Periplasmic binding protein 28 366 9.7E-67 T 22-04-2016 IPR028081 Leucine-binding protein domain LK04_RS03225 ef87a319c86382007533785b53711b99 177 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LK04_RS03225 ef87a319c86382007533785b53711b99 177 SUPERFAMILY SSF54523 8 112 8.63E-5 T 22-04-2016 LK04_RS03225 ef87a319c86382007533785b53711b99 177 PIRSF PIRSF004525 1 173 8.8E-47 T 22-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted LK04_RS03225 ef87a319c86382007533785b53711b99 177 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 6.8E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LK04_RS03225 ef87a319c86382007533785b53711b99 177 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 26 4.6E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LK04_RS17955 8baee6b2946641704d93ee1032cfa8e8 252 PANTHER PTHR10108 1 252 8.2E-183 T 22-04-2016 LK04_RS17955 8baee6b2946641704d93ee1032cfa8e8 252 Gene3D G3DSA:3.40.50.150 24 248 5.0E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS17955 8baee6b2946641704d93ee1032cfa8e8 252 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 26 251 3.9E-87 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LK04_RS17955 8baee6b2946641704d93ee1032cfa8e8 252 SUPERFAMILY SSF53335 20 249 1.16E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS17955 8baee6b2946641704d93ee1032cfa8e8 252 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 251 8.3E-105 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LK04_RS17955 8baee6b2946641704d93ee1032cfa8e8 252 PANTHER PTHR10108:SF864 1 252 8.2E-183 T 22-04-2016 LK04_RS17955 8baee6b2946641704d93ee1032cfa8e8 252 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 159 173 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LK04_RS17955 8baee6b2946641704d93ee1032cfa8e8 252 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 17 251 39.207 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LK04_RS17955 8baee6b2946641704d93ee1032cfa8e8 252 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 37 52 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LK04_RS00730 4a0c366b60d9a22e5e98bc1b210034f6 134 Gene3D G3DSA:3.30.300.20 35 132 3.7E-43 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LK04_RS00730 4a0c366b60d9a22e5e98bc1b210034f6 134 PANTHER PTHR34352 1 134 1.6E-55 T 22-04-2016 LK04_RS00730 4a0c366b60d9a22e5e98bc1b210034f6 134 SUPERFAMILY SSF82784 1 132 6.81E-43 T 22-04-2016 IPR003718 OsmC/Ohr family LK04_RS00730 4a0c366b60d9a22e5e98bc1b210034f6 134 Gene3D G3DSA:2.20.25.10 1 34 2.0E-19 T 22-04-2016 LK04_RS00730 4a0c366b60d9a22e5e98bc1b210034f6 134 Pfam PF02566 OsmC-like protein 30 127 3.2E-19 T 22-04-2016 IPR003718 OsmC/Ohr family LK04_RS18725 79827de9a1f232ef83ea3dcfac93aa75 349 SUPERFAMILY SSF58104 20 98 1.83E-22 T 22-04-2016 LK04_RS18725 79827de9a1f232ef83ea3dcfac93aa75 349 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 53 82 2.18E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS18725 79827de9a1f232ef83ea3dcfac93aa75 349 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 24 51 2.18E-10 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LK04_RS18725 79827de9a1f232ef83ea3dcfac93aa75 349 PANTHER PTHR32089 22 112 1.2E-12 T 22-04-2016 LK04_RS18725 79827de9a1f232ef83ea3dcfac93aa75 349 Gene3D G3DSA:1.10.287.950 19 95 1.7E-21 T 22-04-2016 LK04_RS18725 79827de9a1f232ef83ea3dcfac93aa75 349 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 22 97 8.7E-17 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LK04_RS18725 79827de9a1f232ef83ea3dcfac93aa75 349 PANTHER PTHR32089:SF55 22 112 1.2E-12 T 22-04-2016 LK04_RS01240 397077575ea05950038a0eedfa36c602 484 SUPERFAMILY SSF53720 7 481 5.37E-168 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LK04_RS01240 397077575ea05950038a0eedfa36c602 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LK04_RS01240 397077575ea05950038a0eedfa36c602 484 Gene3D G3DSA:3.40.309.10 269 458 7.1E-67 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LK04_RS01240 397077575ea05950038a0eedfa36c602 484 PANTHER PTHR11699 1 476 5.3E-269 T 22-04-2016 LK04_RS01240 397077575ea05950038a0eedfa36c602 484 Gene3D G3DSA:3.40.605.10 12 268 1.7E-103 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LK04_RS01240 397077575ea05950038a0eedfa36c602 484 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 2.9E-200 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 LK04_RS01240 397077575ea05950038a0eedfa36c602 484 Pfam PF00171 Aldehyde dehydrogenase family 22 477 8.3E-170 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LK04_RS01240 397077575ea05950038a0eedfa36c602 484 PANTHER PTHR11699:SF49 1 476 5.3E-269 T 22-04-2016 LK04_RS02460 f2614b72c3e63c502a048932192a97fc 245 PIRSF PIRSF039085 1 243 4.1E-98 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS02460 f2614b72c3e63c502a048932192a97fc 245 Pfam PF00005 ABC transporter 17 168 3.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS02460 f2614b72c3e63c502a048932192a97fc 245 SMART SM00382 26 216 2.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS02460 f2614b72c3e63c502a048932192a97fc 245 SUPERFAMILY SSF52540 1 237 1.61E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02460 f2614b72c3e63c502a048932192a97fc 245 Gene3D G3DSA:3.40.50.300 1 240 5.9E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS02460 f2614b72c3e63c502a048932192a97fc 245 PANTHER PTHR24220 3 241 8.5E-117 T 22-04-2016 LK04_RS02460 f2614b72c3e63c502a048932192a97fc 245 PANTHER PTHR24220:SF550 3 241 8.5E-117 T 22-04-2016 LK04_RS13450 9f53ac21a693de235a60a1c798b13c08 141 Pfam PF13673 Acetyltransferase (GNAT) domain 27 132 6.1E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS13450 9f53ac21a693de235a60a1c798b13c08 141 SUPERFAMILY SSF55729 1 136 2.87E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS13450 9f53ac21a693de235a60a1c798b13c08 141 PANTHER PTHR23091 1 134 7.7E-18 T 22-04-2016 LK04_RS13450 9f53ac21a693de235a60a1c798b13c08 141 Gene3D G3DSA:3.40.630.30 1 132 9.7E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS13670 f4d73e8dfc9b51229bc7b0d4a3cb53d8 164 PANTHER PTHR11071:SF192 1 164 1.6E-80 T 22-04-2016 LK04_RS13670 f4d73e8dfc9b51229bc7b0d4a3cb53d8 164 Gene3D G3DSA:2.40.100.10 2 162 1.7E-55 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS13670 f4d73e8dfc9b51229bc7b0d4a3cb53d8 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.3E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LK04_RS13670 f4d73e8dfc9b51229bc7b0d4a3cb53d8 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.3E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LK04_RS13670 f4d73e8dfc9b51229bc7b0d4a3cb53d8 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.3E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LK04_RS13670 f4d73e8dfc9b51229bc7b0d4a3cb53d8 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 LK04_RS13670 f4d73e8dfc9b51229bc7b0d4a3cb53d8 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 3.3E-49 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LK04_RS13670 f4d73e8dfc9b51229bc7b0d4a3cb53d8 164 SUPERFAMILY SSF50891 1 162 1.07E-58 T 22-04-2016 IPR029000 Cyclophilin-like domain LK04_RS13670 f4d73e8dfc9b51229bc7b0d4a3cb53d8 164 PIRSF PIRSF001467 1 164 4.3E-29 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LK04_RS13670 f4d73e8dfc9b51229bc7b0d4a3cb53d8 164 PANTHER PTHR11071 1 164 1.6E-80 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LK04_RS12675 7b2d906da52a42b16b765309fe459039 177 SUPERFAMILY SSF55811 6 164 6.94E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS12675 7b2d906da52a42b16b765309fe459039 177 PANTHER PTHR10885 1 159 5.1E-45 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 LK04_RS12675 7b2d906da52a42b16b765309fe459039 177 PIRSF PIRSF018427 1 170 1.1E-49 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 LK04_RS12675 7b2d906da52a42b16b765309fe459039 177 Gene3D G3DSA:3.90.79.10 5 165 3.0E-51 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS12675 7b2d906da52a42b16b765309fe459039 177 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 161 2.9E-37 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 LK04_RS12675 7b2d906da52a42b16b765309fe459039 177 Pfam PF00293 NUDIX domain 30 159 3.6E-22 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LK04_RS12675 7b2d906da52a42b16b765309fe459039 177 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 174 30.775 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 LK04_RS04005 642b775de63c3d385001a961f5edc39e 219 PIRSF PIRSF016938 1 208 5.7E-30 T 22-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 LK04_RS04005 642b775de63c3d385001a961f5edc39e 219 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 134 188 2.3E-25 T 22-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal LK04_RS04005 642b775de63c3d385001a961f5edc39e 219 SUPERFAMILY SSF89069 1 66 5.89E-21 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 LK04_RS04005 642b775de63c3d385001a961f5edc39e 219 PANTHER PTHR38104 1 219 9.2E-75 T 22-04-2016 LK04_RS04005 642b775de63c3d385001a961f5edc39e 219 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 1.3E-35 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 LK04_RS06525 918215a630f03f3e542fff6a5bfad783 343 PANTHER PTHR32196 35 343 3.7E-87 T 22-04-2016 LK04_RS06525 918215a630f03f3e542fff6a5bfad783 343 PANTHER PTHR32196:SF21 35 343 3.7E-87 T 22-04-2016 LK04_RS06525 918215a630f03f3e542fff6a5bfad783 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 332 3.2E-45 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS13640 3856a28c2b19a2aeab511155b914a6e2 200 Pfam PF01420 Type I restriction modification DNA specificity domain 62 160 8.2E-9 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 LK04_RS13640 3856a28c2b19a2aeab511155b914a6e2 200 SUPERFAMILY SSF116734 3 186 3.76E-26 T 22-04-2016 LK04_RS09930 36176a63da2bf1bc936ed897ae64bf33 276 SUPERFAMILY SSF110849 20 90 4.58E-6 T 22-04-2016 IPR003115 ParB/Sulfiredoxin LK04_RS09930 36176a63da2bf1bc936ed897ae64bf33 276 Gene3D G3DSA:3.90.1530.10 22 90 4.0E-5 T 22-04-2016 LK04_RS09930 36176a63da2bf1bc936ed897ae64bf33 276 SUPERFAMILY SSF109709 121 192 1.03E-12 T 22-04-2016 LK04_RS19190 0e0319b359d9d2ddaac687348e54e41b 173 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 17.298 T 22-04-2016 IPR007336 Der GTPase activator LK04_RS19190 0e0319b359d9d2ddaac687348e54e41b 173 Pfam PF04220 Der GTPase activator (YihI) 13 170 8.0E-58 T 22-04-2016 IPR007336 Der GTPase activator LK04_RS12035 08d2450c9a18876495168e90952f351e 249 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.501 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LK04_RS12035 08d2450c9a18876495168e90952f351e 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 240 1.5E-125 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LK04_RS12035 08d2450c9a18876495168e90952f351e 249 Gene3D G3DSA:3.90.550.10 1 248 2.6E-87 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS12035 08d2450c9a18876495168e90952f351e 249 Pfam PF02348 Cytidylyltransferase 4 221 3.3E-69 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LK04_RS12035 08d2450c9a18876495168e90952f351e 249 SUPERFAMILY SSF53448 3 246 1.8E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS12035 08d2450c9a18876495168e90952f351e 249 PANTHER PTHR21485 1 248 2.3E-121 T 22-04-2016 LK04_RS12035 08d2450c9a18876495168e90952f351e 249 PANTHER PTHR21485:SF4 1 248 2.3E-121 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LK04_RS17990 1a8174b9370bdd814c34a4ea44acd4a6 160 PANTHER PTHR37805:SF1 1 156 5.8E-72 T 22-04-2016 LK04_RS17990 1a8174b9370bdd814c34a4ea44acd4a6 160 Pfam PF07308 Protein of unknown function (DUF1456) 4 70 2.3E-24 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 LK04_RS17990 1a8174b9370bdd814c34a4ea44acd4a6 160 Pfam PF07308 Protein of unknown function (DUF1456) 86 152 4.9E-22 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 LK04_RS17990 1a8174b9370bdd814c34a4ea44acd4a6 160 PANTHER PTHR37805 1 156 5.8E-72 T 22-04-2016 LK04_RS05285 d53f008dee793226c82e3ba5433944fe 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 4.9E-97 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 LK04_RS05285 d53f008dee793226c82e3ba5433944fe 274 Gene3D G3DSA:3.30.1380.10 21 272 2.3E-107 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain LK04_RS05285 d53f008dee793226c82e3ba5433944fe 274 SUPERFAMILY SSF55166 21 272 1.1E-99 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain LK04_RS05285 d53f008dee793226c82e3ba5433944fe 274 PIRSF PIRSF018455 2 274 8.4E-117 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 LK04_RS12040 d372fce2894cde288b964b29e0d84686 60 SUPERFAMILY SSF158997 1 54 2.09E-19 T 22-04-2016 LK04_RS12040 d372fce2894cde288b964b29e0d84686 60 PANTHER PTHR33505 1 57 2.6E-24 T 22-04-2016 LK04_RS12040 d372fce2894cde288b964b29e0d84686 60 Pfam PF03966 Trm112p-like protein 2 41 3.2E-10 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 LK04_RS12040 d372fce2894cde288b964b29e0d84686 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.3 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 LK04_RS12040 d372fce2894cde288b964b29e0d84686 60 Gene3D G3DSA:2.20.25.10 8 57 1.1E-23 T 22-04-2016 LK04_RS10135 50d8aba54ec689b6fa0923adfcbc6e0e 210 SMART SM00900 101 193 2.0E-33 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 LK04_RS10135 50d8aba54ec689b6fa0923adfcbc6e0e 210 PIRSF PIRSF006091 1 205 2.6E-70 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 LK04_RS10135 50d8aba54ec689b6fa0923adfcbc6e0e 210 Pfam PF04205 FMN-binding domain 101 188 2.4E-18 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 LK04_RS10135 50d8aba54ec689b6fa0923adfcbc6e0e 210 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 192 7.9E-67 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 LK04_RS10135 50d8aba54ec689b6fa0923adfcbc6e0e 210 PANTHER PTHR36118:SF1 1 210 3.6E-73 T 22-04-2016 LK04_RS10135 50d8aba54ec689b6fa0923adfcbc6e0e 210 PANTHER PTHR36118 1 210 3.6E-73 T 22-04-2016 LK04_RS10135 50d8aba54ec689b6fa0923adfcbc6e0e 210 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 195 26.024 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 LK04_RS15020 60266cfa34a39650e195833242b43a1c 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 323 381 3.7E-23 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain LK04_RS15020 60266cfa34a39650e195833242b43a1c 385 PANTHER PTHR33744:SF1 1 384 1.2E-172 T 22-04-2016 LK04_RS15020 60266cfa34a39650e195833242b43a1c 385 Gene3D G3DSA:1.10.10.60 338 358 1.1E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LK04_RS15020 60266cfa34a39650e195833242b43a1c 385 PANTHER PTHR33744 1 384 1.2E-172 T 22-04-2016 LK04_RS15020 60266cfa34a39650e195833242b43a1c 385 Pfam PF05651 Putative sugar diacid recognition 6 138 1.8E-48 T 22-04-2016 IPR008599 Putative sugar diacid recognition LK04_RS09500 4368e26fcbb91adf129c38d4947ed0e7 280 Gene3D G3DSA:3.20.20.70 1 279 9.3E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS09500 4368e26fcbb91adf129c38d4947ed0e7 280 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 132 143 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS09500 4368e26fcbb91adf129c38d4947ed0e7 280 PIRSF PIRSF001359 1 280 4.1E-88 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS09500 4368e26fcbb91adf129c38d4947ed0e7 280 PANTHER PTHR30304 1 280 3.6E-72 T 22-04-2016 LK04_RS09500 4368e26fcbb91adf129c38d4947ed0e7 280 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 279 3.4E-80 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS09500 4368e26fcbb91adf129c38d4947ed0e7 280 SUPERFAMILY SSF51569 3 279 6.15E-86 T 22-04-2016 LK04_RS09500 4368e26fcbb91adf129c38d4947ed0e7 280 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 279 1.3E-87 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS07555 88013a6da957752bf4d4486e12f58f69 199 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 75 194 8.6E-29 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly LK04_RS07555 88013a6da957752bf4d4486e12f58f69 199 PANTHER PTHR34413 18 198 8.8E-24 T 22-04-2016 LK04_RS12360 7adc1ace9468edfc0fe3c93c991dc2d9 301 PANTHER PTHR30465:SF57 16 301 2.9E-213 T 22-04-2016 LK04_RS12360 7adc1ace9468edfc0fe3c93c991dc2d9 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 70 5.8E-15 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS12360 7adc1ace9468edfc0fe3c93c991dc2d9 301 Gene3D G3DSA:1.10.3720.10 90 297 2.9E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12360 7adc1ace9468edfc0fe3c93c991dc2d9 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 300 4.4E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12360 7adc1ace9468edfc0fe3c93c991dc2d9 301 SUPERFAMILY SSF161098 94 281 1.31E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS12360 7adc1ace9468edfc0fe3c93c991dc2d9 301 PANTHER PTHR30465 16 301 2.9E-213 T 22-04-2016 LK04_RS05155 63c738bac1a982afa368acb83e0403e5 451 SUPERFAMILY SSF53756 238 450 4.4E-11 T 22-04-2016 LK04_RS05155 63c738bac1a982afa368acb83e0403e5 451 Pfam PF00534 Glycosyl transferases group 1 339 422 2.9E-7 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LK04_RS03490 4782bf2d8d0e7d88f64c9893e4181c19 106 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 1 106 5.0E-24 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 LK04_RS03490 4782bf2d8d0e7d88f64c9893e4181c19 106 Pfam PF12084 Protein of unknown function (DUF3561) 1 105 3.3E-47 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 LK04_RS01250 ed58597d8b3f46c3a92420e079d2706b 88 PANTHER PTHR34156:SF5 2 88 1.5E-36 T 22-04-2016 LK04_RS01250 ed58597d8b3f46c3a92420e079d2706b 88 PANTHER PTHR34156 2 88 1.5E-36 T 22-04-2016 LK04_RS01250 ed58597d8b3f46c3a92420e079d2706b 88 Pfam PF07338 Protein of unknown function (DUF1471) 40 88 5.5E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS01250 ed58597d8b3f46c3a92420e079d2706b 88 Gene3D G3DSA:3.30.1660.10 18 88 1.1E-26 T 22-04-2016 IPR025543 Dodecin-like LK04_RS01250 ed58597d8b3f46c3a92420e079d2706b 88 SUPERFAMILY SSF159871 3 88 6.54E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 LK04_RS11945 ae507a1e5d536f828a29a3715f88b6a7 328 SUPERFAMILY SSF53850 38 269 1.37E-52 T 22-04-2016 LK04_RS11945 ae507a1e5d536f828a29a3715f88b6a7 328 SMART SM00062 40 261 1.2E-31 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LK04_RS11945 ae507a1e5d536f828a29a3715f88b6a7 328 PANTHER PTHR30024 4 321 2.1E-151 T 22-04-2016 LK04_RS11945 ae507a1e5d536f828a29a3715f88b6a7 328 PANTHER PTHR30024:SF11 4 321 2.1E-151 T 22-04-2016 LK04_RS11945 ae507a1e5d536f828a29a3715f88b6a7 328 Pfam PF09084 NMT1/THI5 like 79 248 2.0E-14 T 22-04-2016 IPR015168 SsuA/THI5-like LK04_RS11945 ae507a1e5d536f828a29a3715f88b6a7 328 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 41 321 8.4E-89 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 LK04_RS11945 ae507a1e5d536f828a29a3715f88b6a7 328 Gene3D G3DSA:3.40.190.10 122 244 1.1E-34 T 22-04-2016 LK04_RS12380 fed8d940f75594c32fb4c90ac68325aa 321 PANTHER PTHR10188 6 321 2.4E-139 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 LK04_RS12380 fed8d940f75594c32fb4c90ac68325aa 321 Pfam PF01112 Asparaginase 5 318 2.1E-124 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 LK04_RS12380 fed8d940f75594c32fb4c90ac68325aa 321 PANTHER PTHR10188:SF24 6 321 2.4E-139 T 22-04-2016 LK04_RS12380 fed8d940f75594c32fb4c90ac68325aa 321 SUPERFAMILY SSF56235 183 318 1.29E-100 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS12380 fed8d940f75594c32fb4c90ac68325aa 321 SUPERFAMILY SSF56235 4 155 1.29E-100 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS11510 d2221db24b93cd5e05956848e83e01a3 79 Pfam PF07119 Protein of unknown function (DUF1375) 52 73 8.0E-5 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 LK04_RS11510 d2221db24b93cd5e05956848e83e01a3 79 Pfam PF07119 Protein of unknown function (DUF1375) 13 46 1.8E-4 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 LK04_RS19855 500cb71c02704916bfc555c399c1a14f 536 PANTHER PTHR13847 15 535 1.1E-203 T 22-04-2016 LK04_RS19855 500cb71c02704916bfc555c399c1a14f 536 Gene3D G3DSA:3.50.50.60 167 348 2.7E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS19855 500cb71c02704916bfc555c399c1a14f 536 Gene3D G3DSA:3.50.50.60 24 92 2.7E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS19855 500cb71c02704916bfc555c399c1a14f 536 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 22 512 53.479 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 LK04_RS19855 500cb71c02704916bfc555c399c1a14f 536 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 25 512 1.5E-237 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 LK04_RS19855 500cb71c02704916bfc555c399c1a14f 536 PANTHER PTHR13847:SF214 15 535 1.1E-203 T 22-04-2016 LK04_RS19855 500cb71c02704916bfc555c399c1a14f 536 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 26 510 3.6E-213 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 LK04_RS19855 500cb71c02704916bfc555c399c1a14f 536 SUPERFAMILY SSF51905 21 344 4.4E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LK04_RS10300 ff6450e431314aaf380ff20b8b0f825f 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 1.8E-102 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10300 ff6450e431314aaf380ff20b8b0f825f 382 PANTHER PTHR10108:SF795 49 289 9.1E-109 T 22-04-2016 LK04_RS10300 ff6450e431314aaf380ff20b8b0f825f 382 PANTHER PTHR10108:SF795 305 372 9.1E-109 T 22-04-2016 LK04_RS10300 ff6450e431314aaf380ff20b8b0f825f 382 PANTHER PTHR10108 49 289 9.1E-109 T 22-04-2016 LK04_RS10300 ff6450e431314aaf380ff20b8b0f825f 382 PANTHER PTHR10108 305 372 9.1E-109 T 22-04-2016 LK04_RS10300 ff6450e431314aaf380ff20b8b0f825f 382 PIRSF PIRSF003085 3 381 1.8E-126 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 LK04_RS10300 ff6450e431314aaf380ff20b8b0f825f 382 SUPERFAMILY SSF53335 117 372 2.5E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS10300 ff6450e431314aaf380ff20b8b0f825f 382 Gene3D G3DSA:3.40.50.150 117 371 5.0E-94 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS11450 8193093e4360744ee88c3f4d0231757f 187 Pfam PF07273 Protein of unknown function (DUF1439) 28 180 2.6E-54 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 LK04_RS11890 69793aa85418c2a2c2f13c1ad8071592 547 Pfam PF02470 MlaD protein 158 218 2.3E-7 T 22-04-2016 IPR003399 Mce/MlaD LK04_RS11890 69793aa85418c2a2c2f13c1ad8071592 547 Pfam PF02470 MlaD protein 43 134 1.0E-7 T 22-04-2016 IPR003399 Mce/MlaD LK04_RS11890 69793aa85418c2a2c2f13c1ad8071592 547 Pfam PF02470 MlaD protein 289 390 2.6E-12 T 22-04-2016 IPR003399 Mce/MlaD LK04_RS11890 69793aa85418c2a2c2f13c1ad8071592 547 PANTHER PTHR30462 1 547 0.0 T 22-04-2016 LK04_RS11890 69793aa85418c2a2c2f13c1ad8071592 547 PANTHER PTHR30462:SF2 1 547 0.0 T 22-04-2016 LK04_RS13610 6c1759656e6aa07794c008ec6b044199 303 SUPERFAMILY SSF53850 89 296 7.6E-47 T 22-04-2016 LK04_RS13610 6c1759656e6aa07794c008ec6b044199 303 Gene3D G3DSA:3.40.190.10 92 176 7.2E-28 T 22-04-2016 LK04_RS13610 6c1759656e6aa07794c008ec6b044199 303 PANTHER PTHR30537 1 298 1.3E-104 T 22-04-2016 LK04_RS13610 6c1759656e6aa07794c008ec6b044199 303 Gene3D G3DSA:1.10.10.10 3 84 6.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS13610 6c1759656e6aa07794c008ec6b044199 303 Pfam PF03466 LysR substrate binding domain 88 291 6.5E-46 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS13610 6c1759656e6aa07794c008ec6b044199 303 PANTHER PTHR30537:SF5 1 298 1.3E-104 T 22-04-2016 LK04_RS13610 6c1759656e6aa07794c008ec6b044199 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS13610 6c1759656e6aa07794c008ec6b044199 303 Gene3D G3DSA:3.40.190.10 177 259 5.7E-25 T 22-04-2016 LK04_RS13610 6c1759656e6aa07794c008ec6b044199 303 SUPERFAMILY SSF46785 3 111 1.31E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04360 a1214477e9b3a53b123cf9e0caa9e238 201 Gene3D G3DSA:3.40.1260.10 73 199 1.6E-6 T 22-04-2016 IPR027396 DsrEFH-like LK04_RS04360 a1214477e9b3a53b123cf9e0caa9e238 201 SUPERFAMILY SSF75169 74 199 1.08E-9 T 22-04-2016 IPR027396 DsrEFH-like LK04_RS04360 a1214477e9b3a53b123cf9e0caa9e238 201 Pfam PF02635 DsrE/DsrF-like family 74 200 1.2E-8 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein LK04_RS03945 46364fbf6d71ae46073bf98fb0a5bc50 144 PANTHER PTHR12901:SF7 1 142 1.5E-65 T 22-04-2016 LK04_RS03945 46364fbf6d71ae46073bf98fb0a5bc50 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 1.3E-34 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain LK04_RS03945 46364fbf6d71ae46073bf98fb0a5bc50 144 PANTHER PTHR12901 1 142 1.5E-65 T 22-04-2016 LK04_RS03945 46364fbf6d71ae46073bf98fb0a5bc50 144 Gene3D G3DSA:3.30.530.20 1 142 6.5E-50 T 22-04-2016 IPR023393 START-like domain LK04_RS03945 46364fbf6d71ae46073bf98fb0a5bc50 144 SUPERFAMILY SSF55961 1 143 1.06E-37 T 22-04-2016 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 Pfam PF00375 Sodium:dicarboxylate symporter family 17 398 1.6E-62 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 34.11 T 22-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 SUPERFAMILY SSF118215 17 400 2.48E-91 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 Gene3D G3DSA:1.10.3860.10 14 404 7.2E-82 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 PANTHER PTHR11958 15 405 8.5E-226 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 PANTHER PTHR11958:SF68 15 405 8.5E-226 T 22-04-2016 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 2.0E-12 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 2.0E-12 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 2.0E-12 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 2.0E-12 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 2.0E-12 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 2.0E-12 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS01695 c9fb8e4e5bce13a4af25d332c5009a14 410 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 2.0E-12 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LK04_RS09680 03ab10a7418db4ad3d1c64ffdd77a5b4 79 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 2 77 1.6E-18 T 22-04-2016 IPR014299 Pentapeptide MXKDX repeat protein LK04_RS14855 55fa4962ba14d866f8071410a228e944 133 Pfam PF16358 RcsF lipoprotein 32 131 1.6E-48 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 LK04_RS14855 55fa4962ba14d866f8071410a228e944 133 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 132 33.551 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 LK04_RS01360 44b2c82143fc8680f94483474c2108eb 66 PANTHER PTHR38602 1 64 1.8E-20 T 22-04-2016 LK04_RS01360 44b2c82143fc8680f94483474c2108eb 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 4.9E-19 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 LK04_RS01360 44b2c82143fc8680f94483474c2108eb 66 PANTHER PTHR38602:SF1 1 64 1.8E-20 T 22-04-2016 LK04_RS07595 7acdebd09ea6abf932d0444a87a00957 151 Pfam PF05069 Phage virion morphogenesis family 3 147 1.9E-39 T 22-04-2016 IPR006522 Phage virion morphogensis protein LK04_RS07595 7acdebd09ea6abf932d0444a87a00957 151 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 147 8.9E-43 T 22-04-2016 IPR006522 Phage virion morphogensis protein LK04_RS12485 d1b9197605a2136bfe28c1491edd400c 240 PANTHER PTHR24220 3 239 7.2E-160 T 22-04-2016 LK04_RS12485 d1b9197605a2136bfe28c1491edd400c 240 PIRSF PIRSF039085 1 240 2.8E-108 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LK04_RS12485 d1b9197605a2136bfe28c1491edd400c 240 Gene3D G3DSA:3.40.50.300 1 237 2.1E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12485 d1b9197605a2136bfe28c1491edd400c 240 Pfam PF00005 ABC transporter 17 165 2.5E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS12485 d1b9197605a2136bfe28c1491edd400c 240 SUPERFAMILY SSF52540 1 235 2.72E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12485 d1b9197605a2136bfe28c1491edd400c 240 SMART SM00382 26 213 1.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS12485 d1b9197605a2136bfe28c1491edd400c 240 PANTHER PTHR24220:SF569 3 239 7.2E-160 T 22-04-2016 LK04_RS12485 d1b9197605a2136bfe28c1491edd400c 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LK04_RS01005 6231cdbe8f65162d5b3cc7afaf1ee4f3 123 Pfam PF09350 Domain of unknown function (DUF1992) 7 74 4.7E-23 T 22-04-2016 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain LK04_RS01005 6231cdbe8f65162d5b3cc7afaf1ee4f3 123 PANTHER PTHR39158 1 121 2.5E-30 T 22-04-2016 LK04_RS06380 568035f33eb8d3c27344d76a3c564461 416 Gene3D G3DSA:1.20.1250.20 3 210 3.4E-22 T 22-04-2016 LK04_RS06380 568035f33eb8d3c27344d76a3c564461 416 Gene3D G3DSA:1.20.1250.20 229 412 1.5E-15 T 22-04-2016 LK04_RS06380 568035f33eb8d3c27344d76a3c564461 416 PANTHER PTHR23508 2 416 4.2E-144 T 22-04-2016 LK04_RS06380 568035f33eb8d3c27344d76a3c564461 416 PANTHER PTHR23508:SF1 2 416 4.2E-144 T 22-04-2016 LK04_RS06380 568035f33eb8d3c27344d76a3c564461 416 Pfam PF07690 Major Facilitator Superfamily 11 361 5.7E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS06380 568035f33eb8d3c27344d76a3c564461 416 SUPERFAMILY SSF103473 2 411 1.44E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS12925 58d75132dc7665e36c72c2dd3beceaab 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 33 252 5.4E-80 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 LK04_RS12925 58d75132dc7665e36c72c2dd3beceaab 257 SUPERFAMILY SSF53850 26 255 2.69E-70 T 22-04-2016 LK04_RS12925 58d75132dc7665e36c72c2dd3beceaab 257 PIRSF PIRSF004846 3 257 5.0E-80 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 LK04_RS12925 58d75132dc7665e36c72c2dd3beceaab 257 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 3.5E-49 T 22-04-2016 LK04_RS12925 58d75132dc7665e36c72c2dd3beceaab 257 Gene3D G3DSA:3.40.190.10 26 115 7.9E-16 T 22-04-2016 LK04_RS12925 58d75132dc7665e36c72c2dd3beceaab 257 Gene3D G3DSA:3.40.190.10 217 253 7.9E-16 T 22-04-2016 LK04_RS12925 58d75132dc7665e36c72c2dd3beceaab 257 Gene3D G3DSA:3.40.190.10 116 216 2.0E-44 T 22-04-2016 LK04_RS12925 58d75132dc7665e36c72c2dd3beceaab 257 PANTHER PTHR30632:SF0 8 255 6.9E-77 T 22-04-2016 LK04_RS12925 58d75132dc7665e36c72c2dd3beceaab 257 PANTHER PTHR30632 8 255 6.9E-77 T 22-04-2016 LK04_RS11440 866f306da9d37c560723bbb66011f056 400 PANTHER PTHR23517 1 392 1.1E-165 T 22-04-2016 LK04_RS11440 866f306da9d37c560723bbb66011f056 400 Gene3D G3DSA:1.20.1250.20 207 388 3.5E-13 T 22-04-2016 LK04_RS11440 866f306da9d37c560723bbb66011f056 400 Gene3D G3DSA:1.20.1250.20 19 185 2.3E-26 T 22-04-2016 LK04_RS11440 866f306da9d37c560723bbb66011f056 400 Pfam PF07690 Major Facilitator Superfamily 20 241 3.7E-25 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS11440 866f306da9d37c560723bbb66011f056 400 SUPERFAMILY SSF103473 13 388 4.71E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS11440 866f306da9d37c560723bbb66011f056 400 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 400 39.034 T 22-04-2016 IPR022855 Multidrug resistance protein MdtH LK04_RS11440 866f306da9d37c560723bbb66011f056 400 PANTHER PTHR23517:SF2 1 392 1.1E-165 T 22-04-2016 LK04_RS14930 eaee29ae8f3a59e547b70f33b447a993 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 1.4E-61 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LK04_RS14930 eaee29ae8f3a59e547b70f33b447a993 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.807 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LK04_RS14930 eaee29ae8f3a59e547b70f33b447a993 151 Gene3D G3DSA:3.10.129.10 4 147 8.4E-60 T 22-04-2016 IPR029069 HotDog domain LK04_RS14930 eaee29ae8f3a59e547b70f33b447a993 151 Pfam PF07977 FabA-like domain 17 141 6.2E-41 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LK04_RS14930 eaee29ae8f3a59e547b70f33b447a993 151 PANTHER PTHR30272 1 151 3.2E-89 T 22-04-2016 LK04_RS14930 eaee29ae8f3a59e547b70f33b447a993 151 SUPERFAMILY SSF54637 10 149 5.8E-51 T 22-04-2016 IPR029069 HotDog domain LK04_RS18505 637970aa2b8553ab1e45088e8e52eb94 277 Pfam PF00665 Integrase core domain 113 227 1.0E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LK04_RS18505 637970aa2b8553ab1e45088e8e52eb94 277 Gene3D G3DSA:3.30.420.10 107 265 6.8E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS18505 637970aa2b8553ab1e45088e8e52eb94 277 Pfam PF13276 HTH-like domain 38 90 4.2E-10 T 22-04-2016 IPR025948 HTH-like domain LK04_RS18505 637970aa2b8553ab1e45088e8e52eb94 277 PANTHER PTHR32552 1 270 2.9E-68 T 22-04-2016 LK04_RS18505 637970aa2b8553ab1e45088e8e52eb94 277 SUPERFAMILY SSF53098 106 272 1.02E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LK04_RS18840 34c09dd50d1125e2556c9456417160fb 138 PANTHER PTHR11527:SF127 1 136 7.8E-45 T 22-04-2016 LK04_RS18840 34c09dd50d1125e2556c9456417160fb 138 SUPERFAMILY SSF49764 31 136 2.51E-19 T 22-04-2016 IPR008978 HSP20-like chaperone LK04_RS18840 34c09dd50d1125e2556c9456417160fb 138 Gene3D G3DSA:2.60.40.790 5 136 8.0E-17 T 22-04-2016 IPR008978 HSP20-like chaperone LK04_RS18840 34c09dd50d1125e2556c9456417160fb 138 Pfam PF00011 Hsp20/alpha crystallin family 42 136 1.9E-20 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain LK04_RS18840 34c09dd50d1125e2556c9456417160fb 138 PANTHER PTHR11527 1 136 7.8E-45 T 22-04-2016 IPR031107 Small heat shock protein HSP20 LK04_RS02000 9520bb9b13999832f1bac36e66d1e6b2 193 PANTHER PTHR35602:SF3 1 193 2.8E-118 T 22-04-2016 LK04_RS02000 9520bb9b13999832f1bac36e66d1e6b2 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 6.8E-70 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA LK04_RS02000 9520bb9b13999832f1bac36e66d1e6b2 193 SUPERFAMILY SSF53474 3 188 1.68E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS02000 9520bb9b13999832f1bac36e66d1e6b2 193 PANTHER PTHR35602 1 193 2.8E-118 T 22-04-2016 LK04_RS02000 9520bb9b13999832f1bac36e66d1e6b2 193 Gene3D G3DSA:3.40.50.1820 3 185 1.1E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LK04_RS02745 9b59b57da5f516ee47ded43d5273f0b4 235 Pfam PF04231 Endonuclease I 48 233 1.5E-43 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 LK04_RS02745 9b59b57da5f516ee47ded43d5273f0b4 235 SUPERFAMILY SSF54060 28 233 1.53E-85 T 22-04-2016 LK04_RS02745 9b59b57da5f516ee47ded43d5273f0b4 235 PANTHER PTHR33607 11 235 1.7E-61 T 22-04-2016 LK04_RS18135 1b5b023508c02a1434ac3b8066abd890 447 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 447 37.72 T 22-04-2016 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 UniPathway: UPA00566 LK04_RS18135 1b5b023508c02a1434ac3b8066abd890 447 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 442 1.4E-253 T 22-04-2016 LK04_RS07480 81d6c1cd30472efa84ebb7ff87516bcb 213 Pfam PF04391 Protein of unknown function (DUF533) 28 206 4.8E-52 T 22-04-2016 IPR007486 Inner membrane protein YebE LK04_RS07480 81d6c1cd30472efa84ebb7ff87516bcb 213 SUPERFAMILY SSF158682 67 206 1.44E-17 T 22-04-2016 IPR029024 TerB-like LK04_RS07480 81d6c1cd30472efa84ebb7ff87516bcb 213 Gene3D G3DSA:1.10.3680.10 65 206 4.7E-13 T 22-04-2016 IPR029024 TerB-like LK04_RS01475 762ab828bfabe2ee396db07a39ee7d68 117 PANTHER PTHR12510:SF6 1 114 8.4E-60 T 22-04-2016 LK04_RS01475 762ab828bfabe2ee396db07a39ee7d68 117 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 3.2E-21 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like LK04_RS01475 762ab828bfabe2ee396db07a39ee7d68 117 Gene3D G3DSA:3.10.490.10 1 115 9.3E-40 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like LK04_RS01475 762ab828bfabe2ee396db07a39ee7d68 117 SUPERFAMILY SSF110857 1 111 1.96E-32 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like LK04_RS01475 762ab828bfabe2ee396db07a39ee7d68 117 PANTHER PTHR12510 1 114 8.4E-60 T 22-04-2016 LK04_RS09485 357709b905d654c40d322a4900d542df 194 Gene3D G3DSA:3.40.50.300 10 181 3.9E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09485 357709b905d654c40d322a4900d542df 194 SUPERFAMILY SSF52540 10 180 1.55E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS17125 91e33b5d5e97a8ffba9fb0463bf137f7 395 PANTHER PTHR23501:SF90 1 392 1.8E-115 T 22-04-2016 LK04_RS17125 91e33b5d5e97a8ffba9fb0463bf137f7 395 Pfam PF07690 Major Facilitator Superfamily 26 337 5.7E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS17125 91e33b5d5e97a8ffba9fb0463bf137f7 395 SUPERFAMILY SSF103473 15 392 1.96E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS17125 91e33b5d5e97a8ffba9fb0463bf137f7 395 Gene3D G3DSA:1.20.1250.20 22 203 1.4E-31 T 22-04-2016 LK04_RS17125 91e33b5d5e97a8ffba9fb0463bf137f7 395 Gene3D G3DSA:1.20.1250.20 215 392 2.8E-16 T 22-04-2016 LK04_RS17125 91e33b5d5e97a8ffba9fb0463bf137f7 395 PANTHER PTHR23501 1 392 1.8E-115 T 22-04-2016 LK04_RS19175 22f8c163efad661f9a0732f0b166e1e3 209 PANTHER PTHR35891:SF2 1 209 5.5E-85 T 22-04-2016 LK04_RS19175 22f8c163efad661f9a0732f0b166e1e3 209 PANTHER PTHR35891 1 209 5.5E-85 T 22-04-2016 LK04_RS19175 22f8c163efad661f9a0732f0b166e1e3 209 Gene3D G3DSA:3.40.30.10 1 119 3.2E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS19175 22f8c163efad661f9a0732f0b166e1e3 209 Gene3D G3DSA:3.40.30.10 121 206 6.6E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS19175 22f8c163efad661f9a0732f0b166e1e3 209 PIRSF PIRSF001488 1 209 2.6E-81 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL LK04_RS19175 22f8c163efad661f9a0732f0b166e1e3 209 SUPERFAMILY SSF52833 21 206 1.24E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold LK04_RS19175 22f8c163efad661f9a0732f0b166e1e3 209 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LK04_RS19175 22f8c163efad661f9a0732f0b166e1e3 209 Pfam PF01323 DSBA-like thioredoxin domain 40 195 2.0E-24 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 LK04_RS01555 96b2b1f8a4470905c7ad68bfc6548c6e 215 Pfam PF14187 Domain of unknown function (DUF4310) 6 213 2.6E-106 T 22-04-2016 IPR025456 Protein of unknown function DUF4310 LK04_RS01555 96b2b1f8a4470905c7ad68bfc6548c6e 215 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 7 215 1.4E-116 T 22-04-2016 IPR025456 Protein of unknown function DUF4310 LK04_RS16075 12af4e2c91383cd491acd837ceaa894c 763 Pfam PF00884 Sulfatase 162 447 5.7E-20 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LK04_RS16075 12af4e2c91383cd491acd837ceaa894c 763 PANTHER PTHR10342:SF236 514 556 1.2E-65 T 22-04-2016 LK04_RS16075 12af4e2c91383cd491acd837ceaa894c 763 Gene3D G3DSA:3.40.720.10 213 452 2.5E-19 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LK04_RS16075 12af4e2c91383cd491acd837ceaa894c 763 PANTHER PTHR10342:SF236 156 491 1.2E-65 T 22-04-2016 LK04_RS16075 12af4e2c91383cd491acd837ceaa894c 763 PANTHER PTHR10342 156 491 1.2E-65 T 22-04-2016 LK04_RS16075 12af4e2c91383cd491acd837ceaa894c 763 PANTHER PTHR10342 514 556 1.2E-65 T 22-04-2016 LK04_RS16075 12af4e2c91383cd491acd837ceaa894c 763 SUPERFAMILY SSF53649 161 487 1.24E-25 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LK04_RS01700 a7c5fbc974cf08d901ebc04601f62d84 323 PANTHER PTHR30238:SF0 5 319 6.3E-154 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 LK04_RS01700 a7c5fbc974cf08d901ebc04601f62d84 323 Pfam PF03741 Integral membrane protein TerC family 80 283 1.6E-56 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 LK04_RS01700 a7c5fbc974cf08d901ebc04601f62d84 323 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 313 7.7E-119 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 LK04_RS01700 a7c5fbc974cf08d901ebc04601f62d84 323 PANTHER PTHR30238 5 319 6.3E-154 T 22-04-2016 LK04_RS07245 3d1989c2ab21f1eb60a644d2e0bb7856 363 Pfam PF01699 Sodium/calcium exchanger protein 38 187 9.1E-14 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 LK04_RS07245 3d1989c2ab21f1eb60a644d2e0bb7856 363 Pfam PF01699 Sodium/calcium exchanger protein 220 361 1.4E-10 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 LK04_RS07245 3d1989c2ab21f1eb60a644d2e0bb7856 363 PANTHER PTHR37958:SF1 2 363 5.8E-123 T 22-04-2016 LK04_RS07245 3d1989c2ab21f1eb60a644d2e0bb7856 363 PANTHER PTHR37958 2 363 5.8E-123 T 22-04-2016 LK04_RS07245 3d1989c2ab21f1eb60a644d2e0bb7856 363 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 6 361 3.3E-107 T 22-04-2016 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 LK04_RS09550 1618f68bc19a14c2c3263b5d53c5a518 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 1 88 25.105 T 22-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 LK04_RS09550 1618f68bc19a14c2c3263b5d53c5a518 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 24 86 1.1E-12 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 LK04_RS09550 1618f68bc19a14c2c3263b5d53c5a518 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 7 87 3.3E-34 T 22-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 LK04_RS05180 ce9fd778440c1ccf63a77df79f83b9ba 306 Gene3D G3DSA:1.20.1080.10 56 280 3.8E-43 T 22-04-2016 IPR023271 Aquaporin-like LK04_RS05180 ce9fd778440c1ccf63a77df79f83b9ba 306 PANTHER PTHR30520:SF2 19 302 1.1E-170 T 22-04-2016 LK04_RS05180 ce9fd778440c1ccf63a77df79f83b9ba 306 Pfam PF01226 Formate/nitrite transporter 39 275 4.7E-39 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LK04_RS05180 ce9fd778440c1ccf63a77df79f83b9ba 306 PANTHER PTHR30520 19 302 1.1E-170 T 22-04-2016 LK04_RS04690 f72e6f7e228644dfd77f7a6bba3afca2 72 PANTHER PTHR40613:SF1 1 72 1.9E-37 T 22-04-2016 LK04_RS04690 f72e6f7e228644dfd77f7a6bba3afca2 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 2.0E-20 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor LK04_RS04690 f72e6f7e228644dfd77f7a6bba3afca2 72 PANTHER PTHR40613 1 72 1.9E-37 T 22-04-2016 LK04_RS04690 f72e6f7e228644dfd77f7a6bba3afca2 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 4.3E-28 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor LK04_RS17290 47c771f4332e3041f22e9765daa8b0b6 204 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 19 194 5.6E-31 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT LK04_RS17290 47c771f4332e3041f22e9765daa8b0b6 204 PANTHER PTHR33545 1 204 1.1E-50 T 22-04-2016 LK04_RS02015 735548dfa6c3075573c31448c67d3f3d 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS02015 735548dfa6c3075573c31448c67d3f3d 435 PANTHER PTHR23508 19 423 4.6E-170 T 22-04-2016 LK04_RS02015 735548dfa6c3075573c31448c67d3f3d 435 Pfam PF00083 Sugar (and other) transporter 21 215 6.8E-17 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS02015 735548dfa6c3075573c31448c67d3f3d 435 Pfam PF00083 Sugar (and other) transporter 225 415 3.3E-8 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LK04_RS02015 735548dfa6c3075573c31448c67d3f3d 435 SUPERFAMILY SSF103473 13 427 3.14E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS02015 735548dfa6c3075573c31448c67d3f3d 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 296 311 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LK04_RS02015 735548dfa6c3075573c31448c67d3f3d 435 Gene3D G3DSA:1.20.1250.20 17 216 1.0E-22 T 22-04-2016 LK04_RS02015 735548dfa6c3075573c31448c67d3f3d 435 Gene3D G3DSA:1.20.1250.20 240 427 5.6E-13 T 22-04-2016 LK04_RS02015 735548dfa6c3075573c31448c67d3f3d 435 PANTHER PTHR23508:SF13 19 423 4.6E-170 T 22-04-2016 LK04_RS07025 3d6e3ea047cd6298d79049c818db3e52 118 Gene3D G3DSA:1.20.58.380 6 91 9.3E-24 T 22-04-2016 LK04_RS07025 3d6e3ea047cd6298d79049c818db3e52 118 Pfam PF05400 Flagellar protein FliT 21 106 7.2E-22 T 22-04-2016 IPR008622 Flagellar protein FliT LK04_RS08560 2a18bf512515484d092b17d024469ffa 318 Gene3D G3DSA:3.40.50.620 143 304 9.6E-28 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS08560 2a18bf512515484d092b17d024469ffa 318 Pfam PF00582 Universal stress protein family 222 300 2.8E-11 T 22-04-2016 IPR006016 UspA GO:0006950 LK04_RS08560 2a18bf512515484d092b17d024469ffa 318 Pfam PF00582 Universal stress protein family 4 146 2.9E-19 T 22-04-2016 IPR006016 UspA GO:0006950 LK04_RS08560 2a18bf512515484d092b17d024469ffa 318 SUPERFAMILY SSF52402 4 156 7.12E-28 T 22-04-2016 LK04_RS08560 2a18bf512515484d092b17d024469ffa 318 Gene3D G3DSA:3.40.50.620 1 142 1.0E-23 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS08560 2a18bf512515484d092b17d024469ffa 318 SUPERFAMILY SSF52402 155 308 1.09E-21 T 22-04-2016 LK04_RS08560 2a18bf512515484d092b17d024469ffa 318 PANTHER PTHR31964:SF41 244 318 9.1E-74 T 22-04-2016 LK04_RS08560 2a18bf512515484d092b17d024469ffa 318 PANTHER PTHR31964:SF41 1 88 9.1E-74 T 22-04-2016 LK04_RS08560 2a18bf512515484d092b17d024469ffa 318 PANTHER PTHR31964 244 318 9.1E-74 T 22-04-2016 LK04_RS08560 2a18bf512515484d092b17d024469ffa 318 PANTHER PTHR31964 1 88 9.1E-74 T 22-04-2016 LK04_RS05105 dd0cb22182963403d843f214a9d54dff 611 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 46 396 5.0E-85 T 22-04-2016 IPR010090 Phage tail tape measure protein LK04_RS05105 dd0cb22182963403d843f214a9d54dff 611 Pfam PF10145 Phage-related minor tail protein 87 289 8.6E-32 T 22-04-2016 IPR010090 Phage tail tape measure protein LK04_RS19630 c918c3b9aae87872c8f11d0dde6b335c 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.899 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 LK04_RS19630 c918c3b9aae87872c8f11d0dde6b335c 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 2.7E-59 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 LK04_RS19630 c918c3b9aae87872c8f11d0dde6b335c 105 Gene3D G3DSA:1.10.140.10 2 105 1.4E-65 T 22-04-2016 IPR023453 Methionine repressor MetJ domain LK04_RS19630 c918c3b9aae87872c8f11d0dde6b335c 105 SUPERFAMILY SSF47598 2 105 3.11E-58 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LK04_RS19630 c918c3b9aae87872c8f11d0dde6b335c 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 1.0E-46 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 LK04_RS17075 f62903d798f7dc136d6de64152a89bd9 506 Pfam PF03806 AbgT putative transporter family 12 502 7.0E-193 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 LK04_RS17075 f62903d798f7dc136d6de64152a89bd9 506 PANTHER PTHR30282 1 506 9.2E-239 T 22-04-2016 LK04_RS17075 f62903d798f7dc136d6de64152a89bd9 506 PANTHER PTHR30282:SF0 1 506 9.2E-239 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 LK04_RS04845 1f0b59fa65fb70a660c2bdd25390e4d1 150 PRINTS PR01438 Universal stress protein signature 107 119 1.6E-10 T 22-04-2016 IPR006015 Universal stress protein A LK04_RS04845 1f0b59fa65fb70a660c2bdd25390e4d1 150 PRINTS PR01438 Universal stress protein signature 1 17 1.6E-10 T 22-04-2016 IPR006015 Universal stress protein A LK04_RS04845 1f0b59fa65fb70a660c2bdd25390e4d1 150 PRINTS PR01438 Universal stress protein signature 125 147 1.6E-10 T 22-04-2016 IPR006015 Universal stress protein A LK04_RS04845 1f0b59fa65fb70a660c2bdd25390e4d1 150 PANTHER PTHR31964:SF42 1 145 3.5E-20 T 22-04-2016 LK04_RS04845 1f0b59fa65fb70a660c2bdd25390e4d1 150 PANTHER PTHR31964 1 145 3.5E-20 T 22-04-2016 LK04_RS04845 1f0b59fa65fb70a660c2bdd25390e4d1 150 SUPERFAMILY SSF52402 1 145 2.68E-25 T 22-04-2016 LK04_RS04845 1f0b59fa65fb70a660c2bdd25390e4d1 150 Gene3D G3DSA:3.40.50.620 1 145 2.8E-27 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LK04_RS04845 1f0b59fa65fb70a660c2bdd25390e4d1 150 Pfam PF00582 Universal stress protein family 2 145 5.6E-23 T 22-04-2016 IPR006016 UspA GO:0006950 LK04_RS07285 887e45991a5e022e8144f2043a8b534c 404 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 17 226 1.4E-64 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU LK04_RS07285 887e45991a5e022e8144f2043a8b534c 404 Pfam PF00691 OmpA family 288 384 4.0E-6 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS07285 887e45991a5e022e8144f2043a8b534c 404 Gene3D G3DSA:3.30.1330.60 267 390 1.4E-20 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS07285 887e45991a5e022e8144f2043a8b534c 404 SUPERFAMILY SSF103088 279 390 1.83E-20 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS07285 887e45991a5e022e8144f2043a8b534c 404 PANTHER PTHR30329 77 155 1.9E-55 T 22-04-2016 LK04_RS07285 887e45991a5e022e8144f2043a8b534c 404 PANTHER PTHR30329 198 392 1.9E-55 T 22-04-2016 LK04_RS07285 887e45991a5e022e8144f2043a8b534c 404 Pfam PF09850 Type VI secretion system protein DotU 19 220 5.8E-67 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU LK04_RS07285 887e45991a5e022e8144f2043a8b534c 404 PANTHER PTHR30329:SF7 77 155 1.9E-55 T 22-04-2016 LK04_RS07285 887e45991a5e022e8144f2043a8b534c 404 PANTHER PTHR30329:SF7 198 392 1.9E-55 T 22-04-2016 LK04_RS08900 42cb089269236940525d9bcd316ad589 157 Gene3D G3DSA:3.10.180.10 3 142 1.0E-14 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS08900 42cb089269236940525d9bcd316ad589 157 SUPERFAMILY SSF54593 6 132 8.74E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS08900 42cb089269236940525d9bcd316ad589 157 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 122 2.2E-20 T 22-04-2016 LK04_RS13875 f0b21f7c10e0759425570e351f9f754d 125 Pfam PF10757 Biofilm formation regulator YbaJ 1 115 7.1E-60 T 22-04-2016 IPR019693 Biofilm formation regulator YbaJ LK04_RS10365 511a3d981b4907335942faa6a3396c5d 497 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 20 488 5.7E-195 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 LK04_RS10365 511a3d981b4907335942faa6a3396c5d 497 Pfam PF01458 Uncharacterized protein family (UPF0051) 236 468 6.1E-68 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 LK04_RS10365 511a3d981b4907335942faa6a3396c5d 497 SUPERFAMILY SSF101960 40 85 1.31E-135 T 22-04-2016 LK04_RS10365 511a3d981b4907335942faa6a3396c5d 497 SUPERFAMILY SSF101960 127 494 1.31E-135 T 22-04-2016 LK04_RS10365 511a3d981b4907335942faa6a3396c5d 497 PANTHER PTHR30508 19 497 4.9E-288 T 22-04-2016 LK04_RS10365 511a3d981b4907335942faa6a3396c5d 497 PANTHER PTHR30508:SF1 19 497 4.9E-288 T 22-04-2016 LK04_RS14870 e17b0482ce736da060ecb64ad1c0bebb 136 SUPERFAMILY SSF75620 8 118 9.81E-14 T 22-04-2016 LK04_RS14870 e17b0482ce736da060ecb64ad1c0bebb 136 Gene3D G3DSA:3.30.160.200 6 107 1.0E-31 T 22-04-2016 LK04_RS14870 e17b0482ce736da060ecb64ad1c0bebb 136 PANTHER PTHR11075 8 136 4.3E-40 T 22-04-2016 LK04_RS14870 e17b0482ce736da060ecb64ad1c0bebb 136 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LK04_RS14870 e17b0482ce736da060ecb64ad1c0bebb 136 Pfam PF00472 RF-1 domain 8 132 3.3E-26 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LK04_RS08475 db74b864b218ab17a5140d0977dec9cd 90 PANTHER PTHR38008:SF1 1 88 1.9E-18 T 22-04-2016 LK04_RS08475 db74b864b218ab17a5140d0977dec9cd 90 PANTHER PTHR38008 1 88 1.9E-18 T 22-04-2016 LK04_RS08475 db74b864b218ab17a5140d0977dec9cd 90 Pfam PF03891 Domain of unknown function (DUF333) 41 85 6.3E-17 T 22-04-2016 IPR005590 Protein of unknown function DUF333 LK04_RS04985 a0a1bba3fe745804a456efd1541668f5 208 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 6 12 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LK04_RS04985 a0a1bba3fe745804a456efd1541668f5 208 Pfam PF05063 MT-A70 3 92 1.5E-14 T 22-04-2016 IPR007757 MT-A70-like GO:0006139|GO:0008168 LK04_RS04985 a0a1bba3fe745804a456efd1541668f5 208 Pfam PF05063 MT-A70 119 195 3.7E-9 T 22-04-2016 IPR007757 MT-A70-like GO:0006139|GO:0008168 LK04_RS04985 a0a1bba3fe745804a456efd1541668f5 208 SUPERFAMILY SSF53335 3 90 9.41E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LK04_RS00625 6d95a28d4c03202e804dc9b25fc84316 126 Pfam PF10748 Protein of unknown function (DUF2531) 8 106 3.1E-15 T 22-04-2016 IPR019684 Protein of unknown function DUF2531 LK04_RS05120 b2caea7a768574e9c92e2606f63fb65a 185 PIRSF PIRSF012337 2 182 7.5E-45 T 22-04-2016 IPR014462 Phage-associated protein Gp45 LK04_RS05120 b2caea7a768574e9c92e2606f63fb65a 185 Pfam PF06890 Bacteriophage Mu Gp45 protein 16 165 2.4E-48 T 22-04-2016 IPR014462 Phage-associated protein Gp45 LK04_RS07235 2889bd881bd912b07d16c76c95f75d12 269 PANTHER PTHR31350 24 265 2.6E-46 T 22-04-2016 LK04_RS07235 2889bd881bd912b07d16c76c95f75d12 269 Pfam PF13371 Tetratricopeptide repeat 187 258 4.5E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS07235 2889bd881bd912b07d16c76c95f75d12 269 Gene3D G3DSA:1.25.40.10 187 251 1.5E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LK04_RS07235 2889bd881bd912b07d16c76c95f75d12 269 Pfam PF13369 Transglutaminase-like superfamily 34 184 1.1E-41 T 22-04-2016 IPR032698 Protein SirB1, N-terminal LK04_RS07545 39ec4dd4caf33ec14c8e489ab93a7299 389 PANTHER PTHR35861 1 388 1.4E-128 T 22-04-2016 LK04_RS07545 39ec4dd4caf33ec14c8e489ab93a7299 389 PANTHER PTHR35861:SF1 1 388 1.4E-128 T 22-04-2016 LK04_RS07545 39ec4dd4caf33ec14c8e489ab93a7299 389 Pfam PF04984 Phage tail sheath protein 92 376 3.1E-56 T 22-04-2016 IPR007067 Tail sheath protein LK04_RS07545 39ec4dd4caf33ec14c8e489ab93a7299 389 Pfam PF04984 Phage tail sheath protein 1 91 2.1E-14 T 22-04-2016 IPR007067 Tail sheath protein LK04_RS06280 c0257c2f9b2fcb56270db56f0e55795f 451 PIRSF PIRSF006060 3 442 2.4E-73 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS06280 c0257c2f9b2fcb56270db56f0e55795f 451 PANTHER PTHR11785 9 450 3.7E-296 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS06280 c0257c2f9b2fcb56270db56f0e55795f 451 PANTHER PTHR11785:SF350 9 450 3.7E-296 T 22-04-2016 LK04_RS06280 c0257c2f9b2fcb56270db56f0e55795f 451 Pfam PF13520 Amino acid permease 47 411 3.9E-36 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS07340 a023ebea00909d449f358caabe7d3ee8 135 Pfam PF06366 Flagellar protein FlhE 33 135 3.5E-32 T 22-04-2016 IPR009420 Flagellar protein FlhE LK04_RS18310 1f73d036657b28753efc3441577788a5 842 PANTHER PTHR39083 87 836 6.0E-56 T 22-04-2016 LK04_RS18310 1f73d036657b28753efc3441577788a5 842 Pfam PF03170 Bacterial cellulose synthase subunit 128 735 7.0E-204 T 22-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18310 1f73d036657b28753efc3441577788a5 842 PRINTS PR01440 Cellulose synthase subunit B signature 154 175 4.75E-31 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18310 1f73d036657b28753efc3441577788a5 842 PRINTS PR01440 Cellulose synthase subunit B signature 365 386 4.75E-31 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18310 1f73d036657b28753efc3441577788a5 842 PRINTS PR01440 Cellulose synthase subunit B signature 528 547 4.75E-31 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18310 1f73d036657b28753efc3441577788a5 842 PRINTS PR01440 Cellulose synthase subunit B signature 285 308 4.75E-31 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18310 1f73d036657b28753efc3441577788a5 842 PRINTS PR01440 Cellulose synthase subunit B signature 776 796 4.75E-31 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18310 1f73d036657b28753efc3441577788a5 842 PRINTS PR01440 Cellulose synthase subunit B signature 447 468 4.75E-31 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18310 1f73d036657b28753efc3441577788a5 842 PRINTS PR01440 Cellulose synthase subunit B signature 576 595 4.75E-31 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18310 1f73d036657b28753efc3441577788a5 842 PRINTS PR01440 Cellulose synthase subunit B signature 202 225 4.75E-31 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18310 1f73d036657b28753efc3441577788a5 842 PANTHER PTHR39083:SF1 87 836 6.0E-56 T 22-04-2016 LK04_RS14895 45b8cc14a5721685b50673a84a8d3df8 129 SUPERFAMILY SSF54593 3 128 8.86E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS14895 45b8cc14a5721685b50673a84a8d3df8 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 1.7E-17 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LK04_RS14895 45b8cc14a5721685b50673a84a8d3df8 129 Gene3D G3DSA:3.10.180.10 3 128 6.7E-32 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 Gene3D G3DSA:3.30.1360.80 1 170 1.6E-73 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 PIRSF PIRSF006160 1 162 2.1E-65 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.702 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 PANTHER PTHR35799 2 169 3.5E-100 T 22-04-2016 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 SUPERFAMILY SSF63411 4 162 1.28E-66 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.4E-48 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.4E-48 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.4E-48 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.4E-48 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.4E-48 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 7.8E-61 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LK04_RS03630 bb5b2c73587e69a605bd8ebea1e0ffac 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 1.0E-69 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LK04_RS09720 b0238dcb7bab55b84babd34d6a27ee0e 89 PANTHER PTHR30009 11 69 1.7E-24 T 22-04-2016 LK04_RS09720 b0238dcb7bab55b84babd34d6a27ee0e 89 PANTHER PTHR30009:SF1 11 69 1.7E-24 T 22-04-2016 LK04_RS09185 2eae65f0fcc71290f5166b497143126f 126 Pfam PF13665 Domain of unknown function (DUF4150) 11 111 4.3E-29 T 22-04-2016 IPR025425 Domain of unknown function DUF4150 LK04_RS16675 adddd0e37d4add606ce5ee75d871dffa 161 Pfam PF04386 Stringent starvation protein B 9 161 1.8E-44 T 22-04-2016 IPR007481 Stringent starvation protein B LK04_RS16675 adddd0e37d4add606ce5ee75d871dffa 161 PIRSF PIRSF005276 3 161 2.6E-60 T 22-04-2016 IPR007481 Stringent starvation protein B LK04_RS16675 adddd0e37d4add606ce5ee75d871dffa 161 SUPERFAMILY SSF101738 3 117 1.96E-48 T 22-04-2016 IPR007481 Stringent starvation protein B LK04_RS16675 adddd0e37d4add606ce5ee75d871dffa 161 Gene3D G3DSA:2.30.30.220 3 111 8.7E-52 T 22-04-2016 IPR007481 Stringent starvation protein B LK04_RS16675 adddd0e37d4add606ce5ee75d871dffa 161 PANTHER PTHR37486:SF1 2 161 1.2E-83 T 22-04-2016 LK04_RS16675 adddd0e37d4add606ce5ee75d871dffa 161 PANTHER PTHR37486 2 161 1.2E-83 T 22-04-2016 LK04_RS09430 366ca7d121cbfd2be5fe0ebe151e8679 288 SUPERFAMILY SSF52540 14 260 1.85E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09430 366ca7d121cbfd2be5fe0ebe151e8679 288 Pfam PF00005 ABC transporter 37 192 5.8E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS09430 366ca7d121cbfd2be5fe0ebe151e8679 288 SMART SM00382 42 241 2.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS09430 366ca7d121cbfd2be5fe0ebe151e8679 288 Gene3D G3DSA:3.40.50.300 13 263 6.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09430 366ca7d121cbfd2be5fe0ebe151e8679 288 PANTHER PTHR24220:SF574 16 287 4.9E-101 T 22-04-2016 LK04_RS09430 366ca7d121cbfd2be5fe0ebe151e8679 288 PANTHER PTHR24220 16 287 4.9E-101 T 22-04-2016 LK04_RS17650 b1f13574f029e601e317433af20c8f2d 696 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 32 689 5.5E-271 T 22-04-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH LK04_RS06925 4451edaf1e09739a40b31ef28d8788f2 161 PANTHER PTHR35091 1 161 5.6E-52 T 22-04-2016 LK04_RS06925 4451edaf1e09739a40b31ef28d8788f2 161 PANTHER PTHR35091:SF1 1 161 5.6E-52 T 22-04-2016 LK04_RS06925 4451edaf1e09739a40b31ef28d8788f2 161 Pfam PF03748 Flagellar basal body-associated protein FliL 59 159 1.4E-22 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 LK04_RS05290 7d3b1123932a8b49b63060fbd34273ec 265 Pfam PF01925 Sulfite exporter TauE/SafE 14 249 1.8E-44 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LK04_RS05290 7d3b1123932a8b49b63060fbd34273ec 265 PANTHER PTHR30269:SF0 6 258 1.7E-104 T 22-04-2016 LK04_RS05290 7d3b1123932a8b49b63060fbd34273ec 265 PANTHER PTHR30269 6 258 1.7E-104 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LK04_RS19030 a89ca3e5359f36f09052b79362cffd69 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 3.2E-31 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LK04_RS19030 a89ca3e5359f36f09052b79362cffd69 79 SUPERFAMILY SSF81333 3 77 6.02E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 LK04_RS19030 a89ca3e5359f36f09052b79362cffd69 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 2.8E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 LK04_RS19030 a89ca3e5359f36f09052b79362cffd69 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 2.8E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 LK04_RS19030 a89ca3e5359f36f09052b79362cffd69 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 2.8E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 LK04_RS19030 a89ca3e5359f36f09052b79362cffd69 79 Gene3D G3DSA:1.20.20.10 2 77 1.2E-30 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 LK04_RS19030 a89ca3e5359f36f09052b79362cffd69 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site LK04_RS19030 a89ca3e5359f36f09052b79362cffd69 79 Pfam PF00137 ATP synthase subunit C 11 69 3.6E-9 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 LK04_RS19030 a89ca3e5359f36f09052b79362cffd69 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.248 T 22-04-2016 LK04_RS10715 ff890c8153295012e148fe8c97ad6339 227 Gene3D G3DSA:2.40.160.20 25 227 4.4E-25 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS10715 ff890c8153295012e148fe8c97ad6339 227 SUPERFAMILY SSF56925 27 227 2.17E-22 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS10715 ff890c8153295012e148fe8c97ad6339 227 Pfam PF13505 Outer membrane protein beta-barrel domain 12 227 6.6E-18 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel LK04_RS12130 468e44a49fcefb401e1b6038668b2a17 203 PANTHER PTHR35869 1 203 7.1E-61 T 22-04-2016 LK04_RS12130 468e44a49fcefb401e1b6038668b2a17 203 Gene3D G3DSA:2.50.20.10 23 203 8.6E-59 T 22-04-2016 LK04_RS12130 468e44a49fcefb401e1b6038668b2a17 203 SUPERFAMILY SSF89392 23 202 4.32E-54 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX LK04_RS12130 468e44a49fcefb401e1b6038668b2a17 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 2.5E-56 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like LK04_RS12130 468e44a49fcefb401e1b6038668b2a17 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 10 201 32.742 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 LK04_RS12130 468e44a49fcefb401e1b6038668b2a17 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 7.5E-100 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 LK04_RS02730 7d194384821f809c48bdb15528ba690e 187 PANTHER PTHR30327:SF1 1 187 1.2E-69 T 22-04-2016 LK04_RS02730 7d194384821f809c48bdb15528ba690e 187 PANTHER PTHR30327 1 187 1.2E-69 T 22-04-2016 LK04_RS02730 7d194384821f809c48bdb15528ba690e 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 2.7E-50 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 LK04_RS02730 7d194384821f809c48bdb15528ba690e 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.387 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 LK04_RS02730 7d194384821f809c48bdb15528ba690e 187 Gene3D G3DSA:3.40.1740.10 2 40 7.0E-36 T 22-04-2016 LK04_RS02730 7d194384821f809c48bdb15528ba690e 187 Gene3D G3DSA:3.40.1740.10 131 177 7.0E-36 T 22-04-2016 LK04_RS02730 7d194384821f809c48bdb15528ba690e 187 SUPERFAMILY SSF143456 1 187 3.79E-66 T 22-04-2016 LK04_RS02730 7d194384821f809c48bdb15528ba690e 187 Gene3D G3DSA:3.30.70.1300 41 130 3.9E-29 T 22-04-2016 LK04_RS18930 9ae6cb25d0576aab881bbecda9ec8d29 178 Hamap MF_01061 Primosomal protein 1 [dnaT]. 3 178 38.307 T 22-04-2016 IPR020917 Primosomal protein 1 GO:0006260 LK04_RS04840 57555b4b79429cee6c0c421f739c8db0 261 Pfam PF09339 IclR helix-turn-helix domain 19 67 5.0E-13 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS04840 57555b4b79429cee6c0c421f739c8db0 261 PANTHER PTHR30136 3 254 1.1E-42 T 22-04-2016 LK04_RS04840 57555b4b79429cee6c0c421f739c8db0 261 Pfam PF01614 Bacterial transcriptional regulator 130 249 2.0E-19 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal LK04_RS04840 57555b4b79429cee6c0c421f739c8db0 261 Gene3D G3DSA:1.10.10.10 9 82 2.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS04840 57555b4b79429cee6c0c421f739c8db0 261 SUPERFAMILY SSF55781 74 253 2.16E-33 T 22-04-2016 IPR029016 GAF domain-like LK04_RS04840 57555b4b79429cee6c0c421f739c8db0 261 Gene3D G3DSA:3.30.450.40 88 254 1.0E-36 T 22-04-2016 IPR029016 GAF domain-like LK04_RS04840 57555b4b79429cee6c0c421f739c8db0 261 SMART SM00346 16 103 1.8E-20 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LK04_RS04840 57555b4b79429cee6c0c421f739c8db0 261 SUPERFAMILY SSF46785 16 82 2.54E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS01855 4371b84e08d9fd5b52685c6e9427e64d 144 Gene3D G3DSA:1.10.260.40 23 96 5.7E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS01855 4371b84e08d9fd5b52685c6e9427e64d 144 SUPERFAMILY SSF47413 28 100 7.04E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS01855 4371b84e08d9fd5b52685c6e9427e64d 144 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 40 96 9.9E-15 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 LK04_RS08830 06add3782ffc6198ceb01a9e52496768 109 SUPERFAMILY SSF51182 29 96 2.62E-8 T 22-04-2016 IPR011051 RmlC-like cupin domain LK04_RS08830 06add3782ffc6198ceb01a9e52496768 109 Gene3D G3DSA:2.60.120.10 11 98 3.8E-6 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LK04_RS01480 c4bd1acee7433c2e1e718d6db8782137 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS01480 c4bd1acee7433c2e1e718d6db8782137 176 Gene3D G3DSA:3.90.80.10 4 175 2.9E-61 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS01480 c4bd1acee7433c2e1e718d6db8782137 176 SUPERFAMILY SSF50324 3 175 2.09E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS01480 c4bd1acee7433c2e1e718d6db8782137 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.224 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS01480 c4bd1acee7433c2e1e718d6db8782137 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 6.1E-54 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS01480 c4bd1acee7433c2e1e718d6db8782137 176 PANTHER PTHR10286 6 175 5.8E-79 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LK04_RS06825 5727a67b363e29d905c424af19eb88a9 82 Gene3D G3DSA:1.10.1220.10 7 68 1.9E-9 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LK04_RS06825 5727a67b363e29d905c424af19eb88a9 82 SUPERFAMILY SSF47598 6 44 2.22E-8 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 PANTHER PTHR30579 2 281 2.8E-80 T 22-04-2016 LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 PANTHER PTHR30579:SF0 2 281 2.8E-80 T 22-04-2016 LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 Gene3D G3DSA:3.40.190.10 94 188 4.0E-11 T 22-04-2016 LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 4.1E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 Pfam PF03466 LysR substrate binding domain 95 281 1.8E-20 T 22-04-2016 IPR005119 LysR, substrate-binding LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 SUPERFAMILY SSF53850 95 281 1.54E-19 T 22-04-2016 LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 Gene3D G3DSA:3.40.190.10 189 238 3.2E-5 T 22-04-2016 LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 Gene3D G3DSA:1.10.10.10 6 85 1.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS14410 aa1a43f7c5be6f39c1b7a5e37be2cf91 286 SUPERFAMILY SSF46785 3 106 1.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LK04_RS02820 7928c8a245827080b88bca8aab297971 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 37 135 4.8E-15 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 LK04_RS02820 7928c8a245827080b88bca8aab297971 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 147 299 1.2E-45 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 LK04_RS02820 7928c8a245827080b88bca8aab297971 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 366 605 5.0E-39 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 LK04_RS10140 b32e4bef88f98b386662c84e84e0389d 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 2.0E-61 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 LK04_RS10140 b32e4bef88f98b386662c84e84e0389d 233 PIRSF PIRSF006102 1 219 9.1E-76 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 LK04_RS10140 b32e4bef88f98b386662c84e84e0389d 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 1.9E-81 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 LK04_RS10140 b32e4bef88f98b386662c84e84e0389d 233 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 26.985 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 LK04_RS10140 b32e4bef88f98b386662c84e84e0389d 233 PANTHER PTHR30586 1 220 1.1E-133 T 22-04-2016 LK04_RS10140 b32e4bef88f98b386662c84e84e0389d 233 PANTHER PTHR30586:SF0 1 220 1.1E-133 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 LK04_RS02050 936b76277637b0d4b5f2042bd0a9e905 283 Gene3D G3DSA:3.20.20.70 3 283 1.6E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS02050 936b76277637b0d4b5f2042bd0a9e905 283 PIRSF PIRSF001359 1 283 8.3E-68 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS02050 936b76277637b0d4b5f2042bd0a9e905 283 PANTHER PTHR30304 5 283 3.4E-58 T 22-04-2016 LK04_RS02050 936b76277637b0d4b5f2042bd0a9e905 283 SUPERFAMILY SSF51569 5 283 3.85E-75 T 22-04-2016 LK04_RS02050 936b76277637b0d4b5f2042bd0a9e905 283 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 282 6.0E-79 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LK04_RS17320 00ec252c7c24ade04d3f89f365fc3053 416 SUPERFAMILY SSF56925 247 385 4.63E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LK04_RS17320 00ec252c7c24ade04d3f89f365fc3053 416 Pfam PF13729 F plasmid transfer operon, TraF, protein 55 333 6.3E-85 T 22-04-2016 IPR032811 Putative conjugal transfer protein TraF-related LK04_RS17320 00ec252c7c24ade04d3f89f365fc3053 416 Gene3D G3DSA:2.40.160.60 33 400 1.1E-8 T 22-04-2016 LK04_RS01860 35cdb77ebcf1d64003c3094a2f8bab70 217 Pfam PF11726 Protein of unknown function (DUF3296) 47 185 4.5E-16 T 22-04-2016 IPR021723 Inovirus Gp2 LK04_RS16725 04d40ad088739abb2d5b81d2ae264dbb 44 Pfam PF08085 Entericidin EcnA/B family 22 42 6.4E-9 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 LK04_RS12300 0b994ef2260446a0466dea03aa78d59e 123 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 2 115 0.004 T 22-04-2016 IPR020368 Uncharacterised protein family YbjM GO:0016021 LK04_RS12300 0b994ef2260446a0466dea03aa78d59e 123 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 4 118 2.2E-30 T 22-04-2016 IPR020368 Uncharacterised protein family YbjM GO:0016021 LK04_RS02035 cc224efa6787aa0c532020355f4d478c 193 Gene3D G3DSA:3.40.50.360 1 192 4.0E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS02035 cc224efa6787aa0c532020355f4d478c 193 PANTHER PTHR10204 1 193 2.4E-126 T 22-04-2016 LK04_RS02035 cc224efa6787aa0c532020355f4d478c 193 PANTHER PTHR10204:SF36 1 193 2.4E-126 T 22-04-2016 LK04_RS02035 cc224efa6787aa0c532020355f4d478c 193 Pfam PF02525 Flavodoxin-like fold 3 188 1.2E-31 T 22-04-2016 IPR003680 Flavodoxin-like fold LK04_RS02035 cc224efa6787aa0c532020355f4d478c 193 SUPERFAMILY SSF52218 1 192 2.71E-39 T 22-04-2016 IPR029039 Flavoprotein-like domain LK04_RS03565 6916ed91bd44490e54c749e7682f39e0 164 PANTHER PTHR13939 1 161 4.8E-77 T 22-04-2016 LK04_RS03565 6916ed91bd44490e54c749e7682f39e0 164 SUPERFAMILY SSF142433 4 161 2.22E-57 T 22-04-2016 IPR008136 CinA, C-terminal LK04_RS03565 6916ed91bd44490e54c749e7682f39e0 164 Gene3D G3DSA:3.90.950.20 4 161 1.4E-61 T 22-04-2016 IPR008136 CinA, C-terminal LK04_RS03565 6916ed91bd44490e54c749e7682f39e0 164 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 158 6.0E-60 T 22-04-2016 IPR008136 CinA, C-terminal LK04_RS03565 6916ed91bd44490e54c749e7682f39e0 164 Pfam PF02464 Competence-damaged protein 7 159 8.1E-60 T 22-04-2016 IPR008136 CinA, C-terminal LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 PANTHER PTHR11469 1 548 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 Gene3D G3DSA:3.40.50.10490 147 184 1.1E-179 T 22-04-2016 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 Gene3D G3DSA:3.40.50.10490 263 501 1.1E-179 T 22-04-2016 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 Gene3D G3DSA:3.40.50.10490 4 102 1.1E-179 T 22-04-2016 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 Gene3D G3DSA:1.10.1390.10 511 548 3.7E-22 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 PANTHER PTHR11469:SF11 1 548 0.0 T 22-04-2016 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.737 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 Pfam PF00342 Phosphoglucose isomerase 52 541 4.7E-256 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 SUPERFAMILY SSF53697 5 547 5.56E-225 T 22-04-2016 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 3.2E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 3.2E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 3.2E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 3.2E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 3.2E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS17630 7da4c1a9d4857f2850af03427bd91a8d 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 3.2E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LK04_RS19290 a76a02ac687712bb4c4c6f8e9c3e33c2 214 PANTHER PTHR30250 1 208 9.6E-42 T 22-04-2016 LK04_RS19290 a76a02ac687712bb4c4c6f8e9c3e33c2 214 Pfam PF13440 Polysaccharide biosynthesis protein 31 208 1.9E-24 T 22-04-2016 LK04_RS19290 a76a02ac687712bb4c4c6f8e9c3e33c2 214 PANTHER PTHR30250:SF3 1 208 9.6E-42 T 22-04-2016 LK04_RS09560 b3f4f107568549f527750f234d87c675 308 Pfam PF12706 Beta-lactamase superfamily domain 51 270 2.8E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS09560 b3f4f107568549f527750f234d87c675 308 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 308 153.556 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 LK04_RS09560 b3f4f107568549f527750f234d87c675 308 Gene3D G3DSA:3.60.15.10 1 305 4.6E-119 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS09560 b3f4f107568549f527750f234d87c675 308 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 3 303 9.8E-120 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 LK04_RS09560 b3f4f107568549f527750f234d87c675 308 SUPERFAMILY SSF56281 1 303 1.22E-61 T 22-04-2016 IPR001279 Metallo-beta-lactamase LK04_RS08420 43e9c710b433b959e96d63db7abcfb5c 357 Pfam PF05128 Domain of unknown function (DUF697) 183 342 1.1E-54 T 22-04-2016 IPR021147 Protein of unknown function DUF697 LK04_RS08420 43e9c710b433b959e96d63db7abcfb5c 357 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 56 342 3.4E-131 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 LK04_RS08420 43e9c710b433b959e96d63db7abcfb5c 357 PANTHER PTHR39342:SF1 1 357 2.2E-135 T 22-04-2016 LK04_RS08420 43e9c710b433b959e96d63db7abcfb5c 357 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 6 348 38.079 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 LK04_RS08420 43e9c710b433b959e96d63db7abcfb5c 357 PANTHER PTHR39342 1 357 2.2E-135 T 22-04-2016 LK04_RS13550 b9e0a09046df91f3890fb69a2f434416 60 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 1 54 2.8E-12 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like LK04_RS14345 5c8f603f3b0afc2fb7235676711d2bb6 215 Pfam PF02517 CAAX protease self-immunity 114 206 3.2E-18 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 LK04_RS14345 5c8f603f3b0afc2fb7235676711d2bb6 215 PANTHER PTHR10794 102 215 2.2E-14 T 22-04-2016 LK04_RS07445 eb39bb86c2f05b4113b3bd28f5f10057 324 PANTHER PTHR30606 10 324 5.2E-196 T 22-04-2016 LK04_RS07445 eb39bb86c2f05b4113b3bd28f5f10057 324 PANTHER PTHR30606:SF4 10 324 5.2E-196 T 22-04-2016 LK04_RS07445 eb39bb86c2f05b4113b3bd28f5f10057 324 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 2.3E-141 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 LK04_RS07445 eb39bb86c2f05b4113b3bd28f5f10057 324 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 306 1.5E-96 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LK04_RS07445 eb39bb86c2f05b4113b3bd28f5f10057 324 PIRSF PIRSF026649 10 315 1.2E-95 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LK04_RS07445 eb39bb86c2f05b4113b3bd28f5f10057 324 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 53.132 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 LK04_RS16140 06798daada31640a2b72815b3b4c2e86 109 Pfam PF07377 Protein of unknown function (DUF1493) 1 109 2.2E-35 T 22-04-2016 IPR010862 Protein of unknown function DUF1493 LK04_RS04765 c871a06f1fbe43c64b58024753bfe3e3 327 PANTHER PTHR30024 2 312 1.5E-112 T 22-04-2016 LK04_RS04765 c871a06f1fbe43c64b58024753bfe3e3 327 SUPERFAMILY SSF53850 38 255 4.42E-41 T 22-04-2016 LK04_RS04765 c871a06f1fbe43c64b58024753bfe3e3 327 Pfam PF09084 NMT1/THI5 like 62 246 1.2E-18 T 22-04-2016 IPR015168 SsuA/THI5-like LK04_RS04765 c871a06f1fbe43c64b58024753bfe3e3 327 PANTHER PTHR30024:SF3 2 312 1.5E-112 T 22-04-2016 LK04_RS04765 c871a06f1fbe43c64b58024753bfe3e3 327 Gene3D G3DSA:3.40.190.10 104 187 8.1E-23 T 22-04-2016 LK04_RS04765 c871a06f1fbe43c64b58024753bfe3e3 327 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 28 312 6.0E-70 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 LK04_RS16340 23aab720b2d022793fde872191978ee6 174 PIRSF PIRSF025550 1 173 9.4E-67 T 22-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT LK04_RS16340 23aab720b2d022793fde872191978ee6 174 Pfam PF02036 SCP-2 sterol transfer family 45 133 2.1E-17 T 22-04-2016 IPR003033 SCP2 sterol-binding domain LK04_RS16340 23aab720b2d022793fde872191978ee6 174 SUPERFAMILY SSF55718 38 138 3.53E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain LK04_RS16340 23aab720b2d022793fde872191978ee6 174 PANTHER PTHR10094 1 144 1.3E-58 T 22-04-2016 LK04_RS16340 23aab720b2d022793fde872191978ee6 174 Gene3D G3DSA:3.30.1050.10 67 135 3.8E-11 T 22-04-2016 IPR003033 SCP2 sterol-binding domain LK04_RS16340 23aab720b2d022793fde872191978ee6 174 PANTHER PTHR10094:SF16 1 144 1.3E-58 T 22-04-2016 LK04_RS14175 3d6b2ddfcf68a7b7a835a8752e342709 451 PANTHER PTHR11785:SF352 1 450 0.0 T 22-04-2016 LK04_RS14175 3d6b2ddfcf68a7b7a835a8752e342709 451 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LK04_RS14175 3d6b2ddfcf68a7b7a835a8752e342709 451 PANTHER PTHR11785 1 450 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS14175 3d6b2ddfcf68a7b7a835a8752e342709 451 Pfam PF00324 Amino acid permease 15 448 3.7E-105 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LK04_RS14175 3d6b2ddfcf68a7b7a835a8752e342709 451 PIRSF PIRSF006060 1 450 4.0E-74 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS04650 d260c51baa843e84f9f5413d4c1e83dc 167 Gene3D G3DSA:2.70.70.10 13 165 7.7E-61 T 22-04-2016 LK04_RS04650 d260c51baa843e84f9f5413d4c1e83dc 167 SUPERFAMILY SSF51261 15 165 2.09E-56 T 22-04-2016 IPR011055 Duplicated hybrid motif LK04_RS04650 d260c51baa843e84f9f5413d4c1e83dc 167 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 20 144 1.1E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS04650 d260c51baa843e84f9f5413d4c1e83dc 167 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 21 141 1.7E-51 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS04650 d260c51baa843e84f9f5413d4c1e83dc 167 PANTHER PTHR30175 8 116 2.0E-53 T 22-04-2016 LK04_RS04650 d260c51baa843e84f9f5413d4c1e83dc 167 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 83 95 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LK04_RS09470 e96f87faf4cd8e54a7e74e3849f6da82 389 Gene3D G3DSA:1.20.1250.20 206 382 4.0E-9 T 22-04-2016 LK04_RS09470 e96f87faf4cd8e54a7e74e3849f6da82 389 Gene3D G3DSA:1.20.1250.20 10 193 4.2E-24 T 22-04-2016 LK04_RS09470 e96f87faf4cd8e54a7e74e3849f6da82 389 PANTHER PTHR23501:SF4 1 388 3.5E-55 T 22-04-2016 LK04_RS09470 e96f87faf4cd8e54a7e74e3849f6da82 389 SUPERFAMILY SSF103473 5 382 6.28E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS09470 e96f87faf4cd8e54a7e74e3849f6da82 389 PANTHER PTHR23501 1 388 3.5E-55 T 22-04-2016 LK04_RS09470 e96f87faf4cd8e54a7e74e3849f6da82 389 Pfam PF07690 Major Facilitator Superfamily 13 323 6.3E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS05400 604873de4431905338ba1fb84bd2abbb 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 114 3.0E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LK04_RS05400 604873de4431905338ba1fb84bd2abbb 228 PANTHER PTHR30133 1 228 2.5E-171 T 22-04-2016 LK04_RS05400 604873de4431905338ba1fb84bd2abbb 228 SUPERFAMILY SSF161098 7 205 6.67E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05400 604873de4431905338ba1fb84bd2abbb 228 Gene3D G3DSA:1.10.3720.10 7 219 6.8E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05400 604873de4431905338ba1fb84bd2abbb 228 PANTHER PTHR30133:SF1 1 228 2.5E-171 T 22-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 LK04_RS05400 604873de4431905338ba1fb84bd2abbb 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 1.2E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00085 db0261531a59366bc89d468ec6be569f 336 SUPERFAMILY SSF161098 94 161 3.66E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00085 db0261531a59366bc89d468ec6be569f 336 SUPERFAMILY SSF161098 200 321 3.66E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00085 db0261531a59366bc89d468ec6be569f 336 PANTHER PTHR30465 7 170 1.6E-101 T 22-04-2016 LK04_RS00085 db0261531a59366bc89d468ec6be569f 336 PANTHER PTHR30465 194 336 1.6E-101 T 22-04-2016 LK04_RS00085 db0261531a59366bc89d468ec6be569f 336 Gene3D G3DSA:1.10.3720.10 92 164 2.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00085 db0261531a59366bc89d468ec6be569f 336 Gene3D G3DSA:1.10.3720.10 203 333 2.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS00085 db0261531a59366bc89d468ec6be569f 336 PANTHER PTHR30465:SF0 7 170 1.6E-101 T 22-04-2016 LK04_RS00085 db0261531a59366bc89d468ec6be569f 336 PANTHER PTHR30465:SF0 194 336 1.6E-101 T 22-04-2016 LK04_RS00085 db0261531a59366bc89d468ec6be569f 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 336 1.4E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS13175 a869f7e988eede8403d414696c4e608d 66 Pfam PF10725 Protein of unknown function (DUF2517) 2 61 2.8E-34 T 22-04-2016 IPR019663 Uncharacterised protein YbfA LK04_RS08495 cca0f979d674c94af653ad84aa2ca82a 106 PIRSF PIRSF025560 1 106 1.6E-36 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 LK04_RS08495 cca0f979d674c94af653ad84aa2ca82a 106 Pfam PF07027 Protein of unknown function (DUF1318) 17 106 8.5E-29 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 LK04_RS05835 92ec7c81fc7dd23d28856739bd61f7bc 386 PANTHER PTHR30590 2 372 1.4E-123 T 22-04-2016 LK04_RS05835 92ec7c81fc7dd23d28856739bd61f7bc 386 PANTHER PTHR30590:SF2 2 372 1.4E-123 T 22-04-2016 LK04_RS05835 92ec7c81fc7dd23d28856739bd61f7bc 386 Pfam PF04235 Protein of unknown function (DUF418) 215 373 2.0E-43 T 22-04-2016 IPR007349 Domain of unknown function DUF418 LK04_RS01235 a785128111c5d4555db736ae197eeb6f 650 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 1 648 51.638 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 LK04_RS01235 a785128111c5d4555db736ae197eeb6f 650 PANTHER PTHR30509 300 633 0.0 T 22-04-2016 LK04_RS01235 a785128111c5d4555db736ae197eeb6f 650 PANTHER PTHR30509 5 251 0.0 T 22-04-2016 LK04_RS01235 a785128111c5d4555db736ae197eeb6f 650 Pfam PF04632 Fusaric acid resistance protein family 5 645 6.6E-141 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 LK04_RS01235 a785128111c5d4555db736ae197eeb6f 650 PANTHER PTHR30509:SF10 300 633 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 LK04_RS01235 a785128111c5d4555db736ae197eeb6f 650 PANTHER PTHR30509:SF10 5 251 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 LK04_RS12790 f2744a6ccf44ccd8be88f5c2f8ed658b 318 PANTHER PTHR11082 1 309 6.0E-193 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS12790 f2744a6ccf44ccd8be88f5c2f8ed658b 318 SUPERFAMILY SSF51395 1 297 1.34E-69 T 22-04-2016 LK04_RS12790 f2744a6ccf44ccd8be88f5c2f8ed658b 318 PANTHER PTHR11082:SF26 1 309 6.0E-193 T 22-04-2016 LK04_RS12790 f2744a6ccf44ccd8be88f5c2f8ed658b 318 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.928 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 LK04_RS12790 f2744a6ccf44ccd8be88f5c2f8ed658b 318 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS12790 f2744a6ccf44ccd8be88f5c2f8ed658b 318 Gene3D G3DSA:3.20.20.70 2 238 3.5E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LK04_RS12790 f2744a6ccf44ccd8be88f5c2f8ed658b 318 Pfam PF01207 Dihydrouridine synthase (Dus) 5 295 8.0E-87 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS12790 f2744a6ccf44ccd8be88f5c2f8ed658b 318 PIRSF PIRSF006621 1 318 1.5E-78 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LK04_RS14235 07e7ad5c02347aaca1de160410b3324e 303 Gene3D G3DSA:3.30.420.40 132 281 6.6E-46 T 22-04-2016 LK04_RS14235 07e7ad5c02347aaca1de160410b3324e 303 SUPERFAMILY SSF53067 3 299 3.07E-60 T 22-04-2016 LK04_RS14235 07e7ad5c02347aaca1de160410b3324e 303 Pfam PF00480 ROK family 3 300 5.7E-88 T 22-04-2016 IPR000600 ROK family LK04_RS14235 07e7ad5c02347aaca1de160410b3324e 303 PANTHER PTHR18964:SF123 3 299 4.6E-93 T 22-04-2016 LK04_RS14235 07e7ad5c02347aaca1de160410b3324e 303 PANTHER PTHR18964 3 299 4.6E-93 T 22-04-2016 LK04_RS14235 07e7ad5c02347aaca1de160410b3324e 303 Gene3D G3DSA:3.30.420.40 2 131 2.8E-35 T 22-04-2016 LK04_RS01715 f733ef667a4c2b43998af1879d3f3a60 166 Pfam PF01863 Protein of unknown function DUF45 66 148 4.3E-13 T 22-04-2016 IPR002725 Protein of unknown function DUF45 LK04_RS01715 f733ef667a4c2b43998af1879d3f3a60 166 PANTHER PTHR30399 1 164 5.1E-98 T 22-04-2016 LK04_RS01715 f733ef667a4c2b43998af1879d3f3a60 166 PANTHER PTHR30399:SF4 1 164 5.1E-98 T 22-04-2016 LK04_RS11830 9b5b86be17e1c13b381aa800663a3c71 208 PANTHER PTHR38108:SF1 2 208 4.6E-43 T 22-04-2016 LK04_RS11830 9b5b86be17e1c13b381aa800663a3c71 208 PANTHER PTHR38108 2 208 4.6E-43 T 22-04-2016 LK04_RS11830 9b5b86be17e1c13b381aa800663a3c71 208 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 201 5.7E-39 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 LK04_RS16645 c29d3a8918562771be9eb01e1d8981fa 284 Pfam PF03668 P-loop ATPase protein family 1 282 7.7E-145 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 LK04_RS16645 c29d3a8918562771be9eb01e1d8981fa 284 Gene3D G3DSA:3.40.50.300 2 150 2.5E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16645 c29d3a8918562771be9eb01e1d8981fa 284 PANTHER PTHR30448:SF0 1 283 1.9E-156 T 22-04-2016 LK04_RS16645 c29d3a8918562771be9eb01e1d8981fa 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.191 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 LK04_RS16645 c29d3a8918562771be9eb01e1d8981fa 284 PANTHER PTHR30448 1 283 1.9E-156 T 22-04-2016 LK04_RS16645 c29d3a8918562771be9eb01e1d8981fa 284 SUPERFAMILY SSF52540 2 151 9.12E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS16645 c29d3a8918562771be9eb01e1d8981fa 284 PIRSF PIRSF005052 1 284 3.6E-114 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 LK04_RS15005 32c72ff234c142ea02f27b3532fb4a9b 130 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.172 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 LK04_RS15005 32c72ff234c142ea02f27b3532fb4a9b 130 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 1.0E-58 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 LK04_RS15005 32c72ff234c142ea02f27b3532fb4a9b 130 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 1.1E-57 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 LK04_RS15710 af1190dc58ae4e58e6e6cb1630ad5726 297 PANTHER PTHR23150 45 256 2.5E-29 T 22-04-2016 LK04_RS15710 af1190dc58ae4e58e6e6cb1630ad5726 297 Pfam PF03781 Sulfatase-modifying factor enzyme 1 45 256 1.3E-39 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme LK04_RS15710 af1190dc58ae4e58e6e6cb1630ad5726 297 SUPERFAMILY SSF56436 45 293 1.45E-49 T 22-04-2016 IPR016187 C-type lectin fold LK04_RS15710 af1190dc58ae4e58e6e6cb1630ad5726 297 PANTHER PTHR23150:SF19 45 256 2.5E-29 T 22-04-2016 LK04_RS15710 af1190dc58ae4e58e6e6cb1630ad5726 297 Gene3D G3DSA:3.90.1580.10 40 256 5.8E-49 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme LK04_RS10595 4aa3372ce4bc33373e43b152d99a068b 478 PANTHER PTHR39576:SF1 45 474 2.4E-171 T 22-04-2016 LK04_RS10595 4aa3372ce4bc33373e43b152d99a068b 478 PANTHER PTHR39576 45 474 2.4E-171 T 22-04-2016 LK04_RS10595 4aa3372ce4bc33373e43b152d99a068b 478 Pfam PF11924 Invasin beta-domain of outer membrane 73 351 3.0E-100 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane LK04_RS14090 dd687182c291d80f70cb12aaa6859bd6 163 Pfam PF04608 Phosphatidylglycerophosphatase A 19 157 1.1E-51 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 LK04_RS14090 dd687182c291d80f70cb12aaa6859bd6 163 SUPERFAMILY SSF101307 12 157 3.92E-47 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 LK04_RS14090 dd687182c291d80f70cb12aaa6859bd6 163 Gene3D G3DSA:1.10.3760.10 76 154 3.9E-4 T 22-04-2016 IPR027416 YutG-like domain LK04_RS14090 dd687182c291d80f70cb12aaa6859bd6 163 PANTHER PTHR36305 4 163 3.7E-74 T 22-04-2016 LK04_RS14090 dd687182c291d80f70cb12aaa6859bd6 163 PIRSF PIRSF006162 8 163 6.0E-56 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LK04_RS01810 4848e722d2843d831fd48a135c83228d 55 Gene3D G3DSA:1.10.3290.10 2 53 4.7E-5 T 22-04-2016 IPR003812 Fido domain LK04_RS05295 5541091e9f23013766a7d8c408ba0d9a 181 Pfam PF04315 Elongation factor P hydroxylase 13 175 2.5E-81 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- LK04_RS14240 df14261310f6ac410debc20ada29671c 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 41.847 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 LK04_RS14240 df14261310f6ac410debc20ada29671c 303 PANTHER PTHR38103:SF1 3 303 3.4E-159 T 22-04-2016 LK04_RS14240 df14261310f6ac410debc20ada29671c 303 PANTHER PTHR38103 3 303 3.4E-159 T 22-04-2016 LK04_RS14240 df14261310f6ac410debc20ada29671c 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 2.6E-130 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 LK04_RS08590 2dae2e947bcc312fc46483f9218f3d7f 144 PANTHER PTHR33452 1 137 2.6E-18 T 22-04-2016 LK04_RS08590 2dae2e947bcc312fc46483f9218f3d7f 144 Pfam PF07681 DoxX 20 99 3.3E-15 T 22-04-2016 IPR032808 DoxX family LK04_RS00980 f3e3df3843872263239774869e9142b9 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.4E-33 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00980 f3e3df3843872263239774869e9142b9 118 PIRSF PIRSF002134 1 118 2.2E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00980 f3e3df3843872263239774869e9142b9 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.5E-53 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00980 f3e3df3843872263239774869e9142b9 118 Gene3D G3DSA:4.10.910.10 72 118 6.5E-27 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal LK04_RS00980 f3e3df3843872263239774869e9142b9 118 Gene3D G3DSA:1.10.8.50 2 71 4.4E-28 T 22-04-2016 LK04_RS00980 f3e3df3843872263239774869e9142b9 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 LK04_RS00980 f3e3df3843872263239774869e9142b9 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.882 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LK04_RS00980 f3e3df3843872263239774869e9142b9 118 PANTHER PTHR10871 2 118 2.8E-66 T 22-04-2016 LK04_RS00980 f3e3df3843872263239774869e9142b9 118 SUPERFAMILY SSF46946 2 114 8.41E-46 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LK04_RS05720 3c60c6a0eb778c78dca418eb81d8e915 340 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 51 2.8E-7 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LK04_RS05720 3c60c6a0eb778c78dca418eb81d8e915 340 Gene3D G3DSA:1.10.3720.10 133 335 8.0E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05720 3c60c6a0eb778c78dca418eb81d8e915 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 337 6.3E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS05720 3c60c6a0eb778c78dca418eb81d8e915 340 PANTHER PTHR30325 1 338 3.2E-197 T 22-04-2016 LK04_RS05720 3c60c6a0eb778c78dca418eb81d8e915 340 SUPERFAMILY SSF161098 134 321 7.06E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS17645 97b6a9fbea040d25acda1c96ea4fc078 242 Pfam PF06251 Capsule biosynthesis GfcC 25 241 9.3E-64 T 22-04-2016 IPR010425 Domain of unknown function DUF1017 LK04_RS05165 875520657aea3ca6dfe677780afd61a8 106 Gene3D G3DSA:2.10.109.10 2 68 2.5E-7 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LK04_RS05165 875520657aea3ca6dfe677780afd61a8 106 SUPERFAMILY SSF51306 1 92 7.32E-7 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LK04_RS12600 76867db3b4783499849e6528d55529b1 295 Pfam PF01522 Polysaccharide deacetylase 49 151 9.4E-13 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LK04_RS12600 76867db3b4783499849e6528d55529b1 295 PANTHER PTHR10587 46 166 7.7E-16 T 22-04-2016 LK04_RS12600 76867db3b4783499849e6528d55529b1 295 SUPERFAMILY SSF88713 6 271 1.25E-43 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LK04_RS12600 76867db3b4783499849e6528d55529b1 295 Gene3D G3DSA:3.20.20.370 5 271 1.2E-59 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LK04_RS00610 2838d6b18588625ac7a79ced66e86abd 269 PANTHER PTHR32432 1 170 7.4E-17 T 22-04-2016 LK04_RS00610 2838d6b18588625ac7a79ced66e86abd 269 Pfam PF11104 Type IV pilus assembly protein PilM; 9 171 1.4E-10 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM LK04_RS00610 2838d6b18588625ac7a79ced66e86abd 269 SUPERFAMILY SSF53067 61 158 8.55E-5 T 22-04-2016 LK04_RS00610 2838d6b18588625ac7a79ced66e86abd 269 PANTHER PTHR32432:SF3 1 170 7.4E-17 T 22-04-2016 LK04_RS11555 90d5d7df2183f2a499f15403d8871496 158 Gene3D G3DSA:3.10.129.10 7 141 2.4E-20 T 22-04-2016 IPR029069 HotDog domain LK04_RS11555 90d5d7df2183f2a499f15403d8871496 158 SUPERFAMILY SSF54637 6 146 4.97E-26 T 22-04-2016 IPR029069 HotDog domain LK04_RS11555 90d5d7df2183f2a499f15403d8871496 158 PIRSF PIRSF020565 1 157 1.1E-47 T 22-04-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted LK04_RS11555 90d5d7df2183f2a499f15403d8871496 158 Pfam PF07977 FabA-like domain 11 135 4.8E-5 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LK04_RS03465 8f05b7d9edeb274b3d20cd4105860596 339 Pfam PF04389 Peptidase family M28 100 317 8.3E-21 T 22-04-2016 IPR007484 Peptidase M28 LK04_RS03465 8f05b7d9edeb274b3d20cd4105860596 339 SUPERFAMILY SSF53187 42 309 2.14E-30 T 22-04-2016 LK04_RS03465 8f05b7d9edeb274b3d20cd4105860596 339 PANTHER PTHR12147 16 203 4.5E-19 T 22-04-2016 LK04_RS03465 8f05b7d9edeb274b3d20cd4105860596 339 Gene3D G3DSA:3.40.630.10 33 336 1.1E-39 T 22-04-2016 LK04_RS03885 c5831991e9abb11f9268f8c7dec12396 350 PANTHER PTHR30465:SF77 3 184 4.0E-129 T 22-04-2016 LK04_RS03885 c5831991e9abb11f9268f8c7dec12396 350 PANTHER PTHR30465:SF77 208 350 4.0E-129 T 22-04-2016 LK04_RS03885 c5831991e9abb11f9268f8c7dec12396 350 SUPERFAMILY SSF161098 107 175 8.5E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03885 c5831991e9abb11f9268f8c7dec12396 350 SUPERFAMILY SSF161098 214 333 8.5E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03885 c5831991e9abb11f9268f8c7dec12396 350 PANTHER PTHR30465 3 184 4.0E-129 T 22-04-2016 LK04_RS03885 c5831991e9abb11f9268f8c7dec12396 350 PANTHER PTHR30465 208 350 4.0E-129 T 22-04-2016 LK04_RS03885 c5831991e9abb11f9268f8c7dec12396 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 350 4.1E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03885 c5831991e9abb11f9268f8c7dec12396 350 Gene3D G3DSA:1.10.3720.10 217 342 1.0E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS03885 c5831991e9abb11f9268f8c7dec12396 350 Gene3D G3DSA:1.10.3720.10 104 178 1.0E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS02865 515008b600e72296239e200e968bbd09 251 Pfam PF01435 Peptidase family M48 70 245 3.6E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LK04_RS02865 515008b600e72296239e200e968bbd09 251 PANTHER PTHR22726:SF4 1 249 5.9E-140 T 22-04-2016 LK04_RS02865 515008b600e72296239e200e968bbd09 251 Gene3D G3DSA:3.30.2010.10 64 146 1.9E-22 T 22-04-2016 LK04_RS02865 515008b600e72296239e200e968bbd09 251 PANTHER PTHR22726 1 249 5.9E-140 T 22-04-2016 LK04_RS01805 81a84aadfcd5716eef633c61ddf22e62 724 Pfam PF07728 AAA domain (dynein-related subfamily) 335 435 4.1E-7 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 LK04_RS01805 81a84aadfcd5716eef633c61ddf22e62 724 SUPERFAMILY SSF52540 521 639 4.4E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01805 81a84aadfcd5716eef633c61ddf22e62 724 SUPERFAMILY SSF52540 313 441 4.4E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01805 81a84aadfcd5716eef633c61ddf22e62 724 Gene3D G3DSA:3.40.50.300 319 445 5.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS01805 81a84aadfcd5716eef633c61ddf22e62 724 Gene3D G3DSA:3.40.50.300 521 561 5.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS09335 8073eeb5304d6366a6cc3c76df80cac4 300 Gene3D G3DSA:3.90.1530.10 25 72 1.0E-34 T 22-04-2016 LK04_RS09335 8073eeb5304d6366a6cc3c76df80cac4 300 Gene3D G3DSA:3.90.1530.10 105 190 1.0E-34 T 22-04-2016 LK04_RS09335 8073eeb5304d6366a6cc3c76df80cac4 300 Pfam PF08857 Putative ParB-like nuclease 32 224 4.0E-49 T 22-04-2016 IPR014956 Putative ParB-like nuclease LK04_RS09335 8073eeb5304d6366a6cc3c76df80cac4 300 SUPERFAMILY SSF110849 27 72 2.3E-48 T 22-04-2016 IPR003115 ParB/Sulfiredoxin LK04_RS09335 8073eeb5304d6366a6cc3c76df80cac4 300 SUPERFAMILY SSF110849 105 249 2.3E-48 T 22-04-2016 IPR003115 ParB/Sulfiredoxin LK04_RS18790 ef0db5cf4c60464a5b6ec65d164fa7c3 164 SUPERFAMILY SSF51197 1 156 5.22E-40 T 22-04-2016 LK04_RS18790 ef0db5cf4c60464a5b6ec65d164fa7c3 164 Gene3D G3DSA:2.60.120.370 5 156 2.0E-46 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family LK04_RS18790 ef0db5cf4c60464a5b6ec65d164fa7c3 164 PANTHER PTHR34986 3 158 3.2E-46 T 22-04-2016 LK04_RS18790 ef0db5cf4c60464a5b6ec65d164fa7c3 164 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 13 156 2.2E-38 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family LK04_RS18790 ef0db5cf4c60464a5b6ec65d164fa7c3 164 Pfam PF04074 Domain of unknown function (DUF386) 2 153 3.0E-43 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family LK04_RS04945 133dd7fb77cc96080fffb015a072e108 179 SUPERFAMILY SSF109604 1 172 1.96E-37 T 22-04-2016 LK04_RS04945 133dd7fb77cc96080fffb015a072e108 179 Gene3D G3DSA:1.10.3210.10 1 174 3.1E-42 T 22-04-2016 IPR006674 HD domain LK04_RS00310 74cd0bd9a1cace9ef0345bcde302763a 271 PANTHER PTHR10794:SF54 17 267 7.2E-74 T 22-04-2016 LK04_RS00310 74cd0bd9a1cace9ef0345bcde302763a 271 PANTHER PTHR10794 17 267 7.2E-74 T 22-04-2016 LK04_RS00310 74cd0bd9a1cace9ef0345bcde302763a 271 Pfam PF02517 CAAX protease self-immunity 172 258 1.3E-16 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 LK04_RS03640 068e6b3654416c886dd258ff386e51cb 264 PANTHER PTHR38034 2 263 1.0E-98 T 22-04-2016 LK04_RS03640 068e6b3654416c886dd258ff386e51cb 264 Pfam PF01578 Cytochrome C assembly protein 37 260 3.4E-41 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LK04_RS10090 66a94a698f890e8fc48106e6bede5287 338 PANTHER PTHR32196:SF19 6 336 7.7E-181 T 22-04-2016 LK04_RS10090 66a94a698f890e8fc48106e6bede5287 338 PANTHER PTHR32196 6 336 7.7E-181 T 22-04-2016 LK04_RS10090 66a94a698f890e8fc48106e6bede5287 338 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 321 3.0E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LK04_RS00200 fc12345c2b05ce81918bda6b22bda6e2 559 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 556 35.305 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LK04_RS00200 fc12345c2b05ce81918bda6b22bda6e2 559 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 556 8.5E-263 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LK04_RS00200 fc12345c2b05ce81918bda6b22bda6e2 559 PANTHER PTHR30607 2 559 1.0E-304 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LK04_RS00200 fc12345c2b05ce81918bda6b22bda6e2 559 Pfam PF03814 Potassium-transporting ATPase A subunit 11 554 4.5E-242 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LK04_RS00200 fc12345c2b05ce81918bda6b22bda6e2 559 PIRSF PIRSF001294 1 558 1.6E-237 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LK04_RS10440 fe782445bdd110021013cb9dc01b7569 120 Pfam PF10697 Protein of unknown function (DUF2502) 24 112 3.2E-20 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 LK04_RS01065 eb803be16b026156ee8223202a406ad1 82 Gene3D G3DSA:3.30.160.140 2 82 3.7E-32 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 LK04_RS01065 eb803be16b026156ee8223202a406ad1 82 Pfam PF07369 Protein of unknown function (DUF1488) 5 81 5.6E-26 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 LK04_RS01065 eb803be16b026156ee8223202a406ad1 82 SUPERFAMILY SSF160272 2 82 7.19E-28 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 LK04_RS15915 514c693ad8f37e15a23f876842434321 337 SUPERFAMILY SSF74650 37 333 6.49E-11 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LK04_RS15915 514c693ad8f37e15a23f876842434321 337 Pfam PF14486 Domain of unknown function (DUF4432) 35 335 6.5E-21 T 22-04-2016 IPR027839 Protein of unknown function DUF4432 LK04_RS18860 1bcb2ee21a50ec9b731eb5bf868d1e21 236 Gene3D G3DSA:3.60.20.10 1 231 4.9E-19 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS18860 1bcb2ee21a50ec9b731eb5bf868d1e21 236 SUPERFAMILY SSF56235 38 235 1.6E-10 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LK04_RS18860 1bcb2ee21a50ec9b731eb5bf868d1e21 236 Pfam PF13230 Glutamine amidotransferases class-II 32 124 6.5E-5 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 LK04_RS09320 919f36003e4f9843d0c7a615ae5a6d4d 315 Pfam PF08759 Domain of unknown function (DUF1792) 54 266 3.1E-55 T 22-04-2016 IPR014869 Domain of unknown function DUF1792 LK04_RS04340 77c5f9cc5e0bb702bac50227106fed6b 427 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 2.2E-131 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LK04_RS04340 77c5f9cc5e0bb702bac50227106fed6b 427 PANTHER PTHR11119 1 426 8.4E-180 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS04340 77c5f9cc5e0bb702bac50227106fed6b 427 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LK04_RS04340 77c5f9cc5e0bb702bac50227106fed6b 427 Pfam PF00860 Permease family 16 383 1.2E-108 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LK04_RS04340 77c5f9cc5e0bb702bac50227106fed6b 427 PANTHER PTHR11119:SF49 1 426 8.4E-180 T 22-04-2016 LK04_RS18220 9a69fc5df2a683262a0518b5beb211e1 686 PANTHER PTHR30441 6 683 9.4E-157 T 22-04-2016 LK04_RS18220 9a69fc5df2a683262a0518b5beb211e1 686 PANTHER PTHR30441:SF2 6 683 9.4E-157 T 22-04-2016 LK04_RS18220 9a69fc5df2a683262a0518b5beb211e1 686 Pfam PF05170 AsmA family 1 579 1.4E-150 T 22-04-2016 IPR007844 AsmA LK04_RS13585 27c554181a9d23c872512ecda4f8761b 309 Pfam PF01148 Cytidylyltransferase family 43 307 7.4E-64 T 22-04-2016 LK04_RS13585 27c554181a9d23c872512ecda4f8761b 309 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 265 291 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 LK04_RS13585 27c554181a9d23c872512ecda4f8761b 309 PANTHER PTHR13773:SF11 30 309 1.0E-148 T 22-04-2016 LK04_RS13585 27c554181a9d23c872512ecda4f8761b 309 PANTHER PTHR13773 30 309 1.0E-148 T 22-04-2016 LK04_RS06150 34cd377a210ddc5d8b9a4bc916697eab 266 PANTHER PTHR30413 12 262 3.4E-53 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LK04_RS06150 34cd377a210ddc5d8b9a4bc916697eab 266 PANTHER PTHR30413:SF9 12 262 3.4E-53 T 22-04-2016 LK04_RS06150 34cd377a210ddc5d8b9a4bc916697eab 266 Pfam PF01061 ABC-2 type transporter 23 227 4.4E-23 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 LK04_RS06430 0e0fc55f0a2eed2ad87c4b3e4cac2fad 349 Pfam PF00487 Fatty acid desaturase 54 283 4.4E-31 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 LK04_RS07615 7e613424c797c43cc85ad0bf20da27de 71 Pfam PF16080 Bacteriophage holin family HP1 6 55 3.2E-11 T 22-04-2016 IPR032118 Bacteriophage holin HP1 family LK04_RS01225 ac2d2542c96fb382483d5eb0c0ef46ec 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 23.233 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 LK04_RS01225 ac2d2542c96fb382483d5eb0c0ef46ec 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 2.4E-19 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 LK04_RS01535 b2ddabc2c835ff03a5f201737ed4bc49 112 Gene3D G3DSA:1.10.1790.10 23 109 3.4E-5 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS01535 b2ddabc2c835ff03a5f201737ed4bc49 112 SUPERFAMILY SSF63520 21 110 6.67E-8 T 22-04-2016 IPR011608 PRD domain GO:0006355 LK04_RS01535 b2ddabc2c835ff03a5f201737ed4bc49 112 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 9 110 3.3E-36 T 22-04-2016 IPR020044 PRD domain protein, EF0829/AHA3910 LK04_RS12755 1e135eb3a6d6fd486005b6d3358e4a01 604 PANTHER PTHR31616:SF0 8 604 1.4E-153 T 22-04-2016 LK04_RS12755 1e135eb3a6d6fd486005b6d3358e4a01 604 SUPERFAMILY SSF48208 195 594 6.43E-92 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LK04_RS12755 1e135eb3a6d6fd486005b6d3358e4a01 604 Gene3D G3DSA:1.50.10.10 216 597 7.0E-88 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 LK04_RS12755 1e135eb3a6d6fd486005b6d3358e4a01 604 Pfam PF00723 Glycosyl hydrolases family 15 223 538 1.4E-45 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 LK04_RS12755 1e135eb3a6d6fd486005b6d3358e4a01 604 PANTHER PTHR31616 8 604 1.4E-153 T 22-04-2016 LK04_RS11400 22cd00ac46bab3482ebafe552798ab23 137 PANTHER PTHR30435:SF12 2 137 1.8E-49 T 22-04-2016 LK04_RS11400 22cd00ac46bab3482ebafe552798ab23 137 Pfam PF00460 Flagella basal body rod protein 9 39 2.4E-12 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LK04_RS11400 22cd00ac46bab3482ebafe552798ab23 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site LK04_RS11400 22cd00ac46bab3482ebafe552798ab23 137 PIRSF PIRSF002889 1 137 9.8E-43 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 LK04_RS11400 22cd00ac46bab3482ebafe552798ab23 137 PANTHER PTHR30435 2 137 1.8E-49 T 22-04-2016 LK04_RS11400 22cd00ac46bab3482ebafe552798ab23 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 3.4E-44 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 LK04_RS05020 b9415de5fdc7af7757450b308efd67af 210 PANTHER PTHR34408 91 208 7.4E-36 T 22-04-2016 LK04_RS05020 b9415de5fdc7af7757450b308efd67af 210 PANTHER PTHR34408 19 59 7.4E-36 T 22-04-2016 LK04_RS05020 b9415de5fdc7af7757450b308efd67af 210 Pfam PF00182 Chitinase class I 102 165 1.8E-5 T 22-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 LK04_RS05020 b9415de5fdc7af7757450b308efd67af 210 SUPERFAMILY SSF53955 103 207 1.72E-42 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS05020 b9415de5fdc7af7757450b308efd67af 210 SUPERFAMILY SSF53955 9 75 1.72E-42 T 22-04-2016 IPR023346 Lysozyme-like domain LK04_RS05020 b9415de5fdc7af7757450b308efd67af 210 Gene3D G3DSA:3.30.20.10 114 151 6.7E-10 T 22-04-2016 LK04_RS05900 4e24523c13fc97b7dc5eeca4870edfab 150 Pfam PF13508 Acetyltransferase (GNAT) domain 46 121 2.3E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS05900 4e24523c13fc97b7dc5eeca4870edfab 150 PANTHER PTHR23091 1 148 1.4E-14 T 22-04-2016 LK04_RS05900 4e24523c13fc97b7dc5eeca4870edfab 150 SUPERFAMILY SSF55729 2 129 1.6E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS05900 4e24523c13fc97b7dc5eeca4870edfab 150 Gene3D G3DSA:3.40.630.30 2 142 3.9E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS12075 3a2fc6d485b79cf4c43284ec61a9a756 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.452 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LK04_RS12075 3a2fc6d485b79cf4c43284ec61a9a756 226 Gene3D G3DSA:3.40.50.300 6 220 1.0E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12075 3a2fc6d485b79cf4c43284ec61a9a756 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 219 2.9E-94 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LK04_RS12075 3a2fc6d485b79cf4c43284ec61a9a756 226 SUPERFAMILY SSF52540 6 223 1.39E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS12075 3a2fc6d485b79cf4c43284ec61a9a756 226 Pfam PF02224 Cytidylate kinase 8 221 1.7E-82 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LK04_RS12075 3a2fc6d485b79cf4c43284ec61a9a756 226 PANTHER PTHR21299 6 224 3.5E-86 T 22-04-2016 LK04_RS17440 21b4d23378e17343514620f9fd4696a0 91 Pfam PF10956 Protein of unknown function (DUF2756) 1 88 3.0E-19 T 22-04-2016 IPR020158 Protein of unknown function DUF2756 LK04_RS09295 ca191d53363c000695552dff9645a25b 210 Pfam PF01810 LysE type translocator 15 196 2.4E-25 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS09295 ca191d53363c000695552dff9645a25b 210 PANTHER PTHR30086 1 206 2.3E-28 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS05575 61f521ee2142ab27bfd89a4c6904eb64 86 SUPERFAMILY SSF54292 5 86 1.48E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LK04_RS05575 61f521ee2142ab27bfd89a4c6904eb64 86 Gene3D G3DSA:3.10.20.30 6 85 1.3E-17 T 22-04-2016 IPR012675 Beta-grasp domain LK04_RS05575 61f521ee2142ab27bfd89a4c6904eb64 86 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 79 5.0E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LK04_RS05575 61f521ee2142ab27bfd89a4c6904eb64 86 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LK04_RS07110 751e91c1e5e565ab9fe0ff7cc3cff7e9 372 Gene3D G3DSA:2.60.40.420 13 112 5.0E-6 T 22-04-2016 IPR008972 Cupredoxin LK04_RS07110 751e91c1e5e565ab9fe0ff7cc3cff7e9 372 SUPERFAMILY SSF49503 9 112 5.68E-5 T 22-04-2016 IPR008972 Cupredoxin LK04_RS07110 751e91c1e5e565ab9fe0ff7cc3cff7e9 372 Pfam PF09375 Imelysin 133 364 6.4E-43 T 22-04-2016 LK04_RS07110 751e91c1e5e565ab9fe0ff7cc3cff7e9 372 Pfam PF13473 Cupredoxin-like domain 9 112 3.4E-24 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain LK04_RS07110 751e91c1e5e565ab9fe0ff7cc3cff7e9 372 PANTHER PTHR39192 1 372 3.8E-150 T 22-04-2016 LK04_RS16090 8831529205bf54d590a984d8194d3560 236 PANTHER PTHR13256 9 223 2.2E-91 T 22-04-2016 LK04_RS16090 8831529205bf54d590a984d8194d3560 236 SUPERFAMILY SSF55729 26 200 4.09E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS16090 8831529205bf54d590a984d8194d3560 236 Gene3D G3DSA:3.40.630.30 17 216 1.5E-57 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS16090 8831529205bf54d590a984d8194d3560 236 Pfam PF13302 Acetyltransferase (GNAT) domain 37 176 1.7E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS16090 8831529205bf54d590a984d8194d3560 236 PANTHER PTHR13256:SF22 9 223 2.2E-91 T 22-04-2016 LK04_RS19405 146f0048f24a9213d1055aa3272acee4 258 SUPERFAMILY SSF53448 4 144 3.09E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS19405 146f0048f24a9213d1055aa3272acee4 258 Pfam PF00535 Glycosyl transferase family 2 8 136 1.5E-16 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LK04_RS19405 146f0048f24a9213d1055aa3272acee4 258 PANTHER PTHR10859:SF99 2 132 1.1E-30 T 22-04-2016 LK04_RS19405 146f0048f24a9213d1055aa3272acee4 258 Gene3D G3DSA:3.90.550.10 6 111 1.5E-13 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS19405 146f0048f24a9213d1055aa3272acee4 258 PANTHER PTHR10859 2 132 1.1E-30 T 22-04-2016 LK04_RS11505 4beb0475dd57475e828fbfcbfcd6e0e2 132 Pfam PF13984 MsyB protein 3 124 5.0E-60 T 22-04-2016 IPR025729 MsyB protein LK04_RS08375 476e86e066f19551053f211ab7ca1415 321 Gene3D G3DSA:1.10.3720.10 69 141 2.2E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08375 476e86e066f19551053f211ab7ca1415 321 Gene3D G3DSA:1.10.3720.10 181 310 2.2E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08375 476e86e066f19551053f211ab7ca1415 321 PANTHER PTHR30465:SF65 1 147 7.6E-177 T 22-04-2016 LK04_RS08375 476e86e066f19551053f211ab7ca1415 321 PANTHER PTHR30465:SF65 172 315 7.6E-177 T 22-04-2016 LK04_RS08375 476e86e066f19551053f211ab7ca1415 321 SUPERFAMILY SSF161098 72 138 2.22E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08375 476e86e066f19551053f211ab7ca1415 321 SUPERFAMILY SSF161098 178 299 2.22E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08375 476e86e066f19551053f211ab7ca1415 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 1.1E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LK04_RS08375 476e86e066f19551053f211ab7ca1415 321 PANTHER PTHR30465 1 147 7.6E-177 T 22-04-2016 LK04_RS08375 476e86e066f19551053f211ab7ca1415 321 PANTHER PTHR30465 172 315 7.6E-177 T 22-04-2016 LK04_RS18270 7fc2ad8d1db29833a60849b4a1df739a 64 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 17 57 8.0E-5 T 22-04-2016 IPR024487 Cellulose biosynthesis protein BcsR LK04_RS18270 7fc2ad8d1db29833a60849b4a1df739a 64 Pfam PF10945 Cellulose biosynthesis protein BcsR 16 56 6.0E-22 T 22-04-2016 IPR024487 Cellulose biosynthesis protein BcsR LK04_RS03315 628f5f3cbf7464215c5d6e69e1ea896c 131 PANTHER PTHR10584:SF191 6 67 3.9E-18 T 22-04-2016 LK04_RS03315 628f5f3cbf7464215c5d6e69e1ea896c 131 PANTHER PTHR10584 6 67 3.9E-18 T 22-04-2016 LK04_RS03315 628f5f3cbf7464215c5d6e69e1ea896c 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 5.9E-24 T 22-04-2016 IPR006696 Protein of unknown function DUF423 LK04_RS07190 a1dc3941c815ee3e582b2c926e34b737 91 Pfam PF10762 Protein of unknown function (DUF2583) 1 88 1.4E-42 T 22-04-2016 IPR019698 Protein of unknown function DUF2583 LK04_RS18100 44e180740863c1232e7d536117efc63d 376 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 32 362 4.1E-137 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX LK04_RS18100 44e180740863c1232e7d536117efc63d 376 PANTHER PTHR38043 1 375 1.3E-106 T 22-04-2016 LK04_RS10890 d2784d79570d1935e89b6f6c3c18dd11 259 SMART SM00382 37 230 2.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LK04_RS10890 d2784d79570d1935e89b6f6c3c18dd11 259 Pfam PF00005 ABC transporter 29 167 5.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LK04_RS10890 d2784d79570d1935e89b6f6c3c18dd11 259 PANTHER PTHR24220 14 213 2.8E-80 T 22-04-2016 LK04_RS10890 d2784d79570d1935e89b6f6c3c18dd11 259 Gene3D G3DSA:3.40.50.300 6 214 3.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS10890 d2784d79570d1935e89b6f6c3c18dd11 259 SUPERFAMILY SSF52540 13 237 3.15E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LK04_RS13735 87aeb0fb86da66fc66906ae7998ba616 266 Pfam PF01963 TraB family 31 265 6.4E-38 T 22-04-2016 IPR002816 Pheromone shutdown, TraB LK04_RS13735 87aeb0fb86da66fc66906ae7998ba616 266 PANTHER PTHR40590 1 265 9.2E-80 T 22-04-2016 LK04_RS17335 f941068dacff0adbfdd30f02992a2f31 441 PANTHER PTHR11206:SF94 8 435 3.3E-131 T 22-04-2016 LK04_RS17335 f941068dacff0adbfdd30f02992a2f31 441 PANTHER PTHR11206 8 435 3.3E-131 T 22-04-2016 LK04_RS17335 f941068dacff0adbfdd30f02992a2f31 441 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 410 8.5E-92 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS17335 f941068dacff0adbfdd30f02992a2f31 441 Pfam PF01554 MatE 241 395 4.2E-10 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS17335 f941068dacff0adbfdd30f02992a2f31 441 Pfam PF01554 MatE 17 177 3.4E-29 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LK04_RS03190 d3d3ca3797a25116f2e04ba40cac69bb 236 PANTHER PTHR30060 1 235 3.6E-114 T 22-04-2016 LK04_RS03190 d3d3ca3797a25116f2e04ba40cac69bb 236 Pfam PF03741 Integral membrane protein TerC family 16 202 2.6E-53 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 LK04_RS03190 d3d3ca3797a25116f2e04ba40cac69bb 236 PANTHER PTHR30060:SF1 1 235 3.6E-114 T 22-04-2016 LK04_RS09840 76a3093acdff2d36eb0cd6f7bb8a0086 292 Pfam PF04233 Phage Mu protein F like protein 153 261 3.1E-9 T 22-04-2016 IPR006528 Phage head morphogenesis domain LK04_RS09530 2ef8c2c56b2abe747853c71db59d28c9 116 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 107 8.5E-23 T 22-04-2016 IPR009241 Toxin HigB-like LK04_RS13070 9be628acbcc1a0c30ebfc07f7465ef9f 523 PIRSF PIRSF006446 1 523 6.5E-143 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LK04_RS13070 9be628acbcc1a0c30ebfc07f7465ef9f 523 PANTHER PTHR30365 1 310 4.5E-268 T 22-04-2016 LK04_RS13070 9be628acbcc1a0c30ebfc07f7465ef9f 523 PANTHER PTHR30365 376 520 4.5E-268 T 22-04-2016 LK04_RS13070 9be628acbcc1a0c30ebfc07f7465ef9f 523 PANTHER PTHR30365:SF0 1 310 4.5E-268 T 22-04-2016 LK04_RS13070 9be628acbcc1a0c30ebfc07f7465ef9f 523 PANTHER PTHR30365:SF0 376 520 4.5E-268 T 22-04-2016 LK04_RS13070 9be628acbcc1a0c30ebfc07f7465ef9f 523 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 3.5E-175 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LK04_RS15370 c1dcc80b11a96016e0550a72e2dc377e 166 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 3 163 4.0E-33 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 LK04_RS15370 c1dcc80b11a96016e0550a72e2dc377e 166 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 164 4.9E-48 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 LK04_RS15370 c1dcc80b11a96016e0550a72e2dc377e 166 Hamap MF_01332 Secretion monitor [secM]. 1 165 31.219 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 LK04_RS15190 b7d7e10b7959091fd39b780a79352d42 423 PANTHER PTHR30304:SF3 131 421 1.8E-15 T 22-04-2016 LK04_RS15190 b7d7e10b7959091fd39b780a79352d42 423 Pfam PF07005 Putative sugar-binding N-terminal domain 11 229 4.1E-52 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain LK04_RS15190 b7d7e10b7959091fd39b780a79352d42 423 PANTHER PTHR30304 131 421 1.8E-15 T 22-04-2016 LK04_RS15190 b7d7e10b7959091fd39b780a79352d42 423 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 242 410 9.4E-37 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain LK04_RS15190 b7d7e10b7959091fd39b780a79352d42 423 SUPERFAMILY SSF142764 11 417 6.02E-88 T 22-04-2016 LK04_RS15490 19f2eec018c4bfb12c015de90cfd6656 393 Gene3D G3DSA:1.20.1250.20 213 389 5.8E-22 T 22-04-2016 LK04_RS15490 19f2eec018c4bfb12c015de90cfd6656 393 Gene3D G3DSA:1.20.1250.20 12 201 2.7E-19 T 22-04-2016 LK04_RS15490 19f2eec018c4bfb12c015de90cfd6656 393 PANTHER PTHR23535:SF2 2 393 6.9E-179 T 22-04-2016 LK04_RS15490 19f2eec018c4bfb12c015de90cfd6656 393 SUPERFAMILY SSF103473 9 389 1.11E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS15490 19f2eec018c4bfb12c015de90cfd6656 393 PANTHER PTHR23535 2 393 6.9E-179 T 22-04-2016 LK04_RS15490 19f2eec018c4bfb12c015de90cfd6656 393 Pfam PF07690 Major Facilitator Superfamily 20 302 2.0E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS15960 d14fc7651f1466e9793f5d962d059c4a 223 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 3.6E-70 T 22-04-2016 IPR019305 Uncharacterised protein family Smp LK04_RS17835 b33bdfa9be26f6b4545b5de303e309de 185 SUPERFAMILY SSF55729 1 173 3.72E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS17835 b33bdfa9be26f6b4545b5de303e309de 185 Pfam PF13673 Acetyltransferase (GNAT) domain 40 151 2.9E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LK04_RS17835 b33bdfa9be26f6b4545b5de303e309de 185 Gene3D G3DSA:3.40.630.30 16 174 4.3E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LK04_RS07635 bead9b14fe9e546390f6cae886881d0a 357 Pfam PF05125 Phage major capsid protein, P2 family 8 340 1.7E-152 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 LK04_RS07635 bead9b14fe9e546390f6cae886881d0a 357 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 342 4.9E-103 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 LK04_RS00335 89d159dc616f987dbb3b0b0b4a016bc4 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.346 T 22-04-2016 IPR019598 Universal stress protein B LK04_RS00335 89d159dc616f987dbb3b0b0b4a016bc4 111 Pfam PF10625 Universal stress protein B (UspB) 1 107 1.0E-53 T 22-04-2016 IPR019598 Universal stress protein B LK04_RS15670 c90d347ec5cd96b69a316455299def38 174 PANTHER PTHR37625 1 173 1.2E-52 T 22-04-2016 LK04_RS15670 c90d347ec5cd96b69a316455299def38 174 PANTHER PTHR37625:SF1 1 173 1.2E-52 T 22-04-2016 LK04_RS15670 c90d347ec5cd96b69a316455299def38 174 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 162 5.9E-28 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN LK04_RS15670 c90d347ec5cd96b69a316455299def38 174 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 18 164 5.5E-39 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN LK04_RS02135 ba1aa721f0b563a0dc49881c4939b44d 231 Gene3D G3DSA:2.60.40.360 24 146 1.7E-18 T 22-04-2016 IPR008962 PapD-like LK04_RS02135 ba1aa721f0b563a0dc49881c4939b44d 231 SUPERFAMILY SSF49354 19 145 4.19E-24 T 22-04-2016 IPR008962 PapD-like LK04_RS02135 ba1aa721f0b563a0dc49881c4939b44d 231 PANTHER PTHR30251 1 208 1.7E-62 T 22-04-2016 LK04_RS02135 ba1aa721f0b563a0dc49881c4939b44d 231 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 34 142 4.6E-19 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LK04_RS02135 ba1aa721f0b563a0dc49881c4939b44d 231 PANTHER PTHR30251:SF4 1 208 1.7E-62 T 22-04-2016 LK04_RS04560 2009db2366c1701cac9756e936c88672 357 Pfam PF06674 Protein of unknown function (DUF1176) 25 348 4.5E-88 T 22-04-2016 IPR009560 Protein of unknown function DUF1176 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PANTHER PTHR39083:SF1 465 763 2.8E-137 T 22-04-2016 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PANTHER PTHR39083:SF1 14 449 2.8E-137 T 22-04-2016 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PRINTS PR01440 Cellulose synthase subunit B signature 513 532 2.0E-34 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PRINTS PR01440 Cellulose synthase subunit B signature 379 400 2.0E-34 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PRINTS PR01440 Cellulose synthase subunit B signature 550 570 2.0E-34 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PRINTS PR01440 Cellulose synthase subunit B signature 82 103 2.0E-34 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PRINTS PR01440 Cellulose synthase subunit B signature 172 193 2.0E-34 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PRINTS PR01440 Cellulose synthase subunit B signature 296 317 2.0E-34 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PRINTS PR01440 Cellulose synthase subunit B signature 703 723 2.0E-34 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PRINTS PR01440 Cellulose synthase subunit B signature 214 237 2.0E-34 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PANTHER PTHR39083 465 763 2.8E-137 T 22-04-2016 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 PANTHER PTHR39083 14 449 2.8E-137 T 22-04-2016 LK04_RS18285 04a5be46e1aebbf965ad5472c7d04afd 765 Pfam PF03170 Bacterial cellulose synthase subunit 55 664 5.7E-220 T 22-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 LK04_RS12820 48ea090579f0a1a480fe2ffe34ee9486 321 PANTHER PTHR34697 1 320 1.8E-37 T 22-04-2016 LK04_RS12820 48ea090579f0a1a480fe2ffe34ee9486 321 PANTHER PTHR34697:SF2 1 320 1.8E-37 T 22-04-2016 LK04_RS12820 48ea090579f0a1a480fe2ffe34ee9486 321 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 295 2.1E-14 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LK04_RS07175 ff7d7e645636d0042fde793c34c60d89 283 Pfam PF05675 Protein of unknown function (DUF817) 30 266 8.5E-98 T 22-04-2016 IPR008535 Protein of unknown function DUF817 LK04_RS07175 ff7d7e645636d0042fde793c34c60d89 283 PIRSF PIRSF009141 19 283 7.8E-114 T 22-04-2016 IPR008535 Protein of unknown function DUF817 LK04_RS11605 44c217357e8dfc56e74f064bbe60bd71 84 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 13.391 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LK04_RS11605 44c217357e8dfc56e74f064bbe60bd71 84 SUPERFAMILY SSF47336 2 82 5.1E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS11605 44c217357e8dfc56e74f064bbe60bd71 84 Gene3D G3DSA:1.10.1200.10 1 80 2.0E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS11605 44c217357e8dfc56e74f064bbe60bd71 84 Pfam PF00550 Phosphopantetheine attachment site 10 76 7.7E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS00195 b2259942ade11c0e42897782957f5768 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 1.6E-5 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 LK04_RS00195 b2259942ade11c0e42897782957f5768 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 9.1E-9 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 LK04_RS18265 ec7a1b6e95b07efc8a9339861b3366af 515 Pfam PF10995 GGDEF I-site like or GIL domain 159 468 4.3E-125 T 22-04-2016 IPR017745 Cellulose biosynthesis protein BcsE LK04_RS18265 ec7a1b6e95b07efc8a9339861b3366af 515 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 152 469 2.9E-104 T 22-04-2016 IPR017745 Cellulose biosynthesis protein BcsE LK04_RS04695 cd1fb499e57eef963e419a881cef0d1b 333 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 316 2.9E-98 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter LK04_RS04695 cd1fb499e57eef963e419a881cef0d1b 333 PIRSF PIRSF026166 1 333 2.7E-128 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter LK04_RS04695 cd1fb499e57eef963e419a881cef0d1b 333 PANTHER PTHR18640:SF9 3 329 1.6E-112 T 22-04-2016 LK04_RS04695 cd1fb499e57eef963e419a881cef0d1b 333 PANTHER PTHR18640 3 329 1.6E-112 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter LK04_RS16515 e4deea88c913c3cee9ee72c1cfbe15f1 393 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 99 389 1.6E-89 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 LK04_RS16515 e4deea88c913c3cee9ee72c1cfbe15f1 393 Gene3D G3DSA:3.60.120.10 51 392 1.2E-88 T 22-04-2016 IPR005801 ADC synthase GO:0009058 LK04_RS16515 e4deea88c913c3cee9ee72c1cfbe15f1 393 SUPERFAMILY SSF56322 22 391 2.35E-92 T 22-04-2016 IPR005801 ADC synthase GO:0009058 LK04_RS16515 e4deea88c913c3cee9ee72c1cfbe15f1 393 PANTHER PTHR11236:SF21 116 393 1.1E-140 T 22-04-2016 LK04_RS16515 e4deea88c913c3cee9ee72c1cfbe15f1 393 Pfam PF00425 chorismate binding enzyme 127 382 1.4E-72 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal LK04_RS16515 e4deea88c913c3cee9ee72c1cfbe15f1 393 PANTHER PTHR11236 116 393 1.1E-140 T 22-04-2016 LK04_RS11705 70aece6d8051ce56f4b1f601e06e4692 224 Pfam PF14342 Domain of unknown function (DUF4396) 79 220 2.3E-33 T 22-04-2016 IPR025509 Domain of unknown function DUF4396 LK04_RS12030 6b973eccd83596a39723de2b33f9b944 297 Pfam PF01636 Phosphotransferase enzyme family 42 252 7.5E-6 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase LK04_RS12030 6b973eccd83596a39723de2b33f9b944 297 SUPERFAMILY SSF56112 11 270 8.42E-22 T 22-04-2016 IPR011009 Protein kinase-like domain LK04_RS11245 37f0d32e36f5501fd03139f630568abc 121 Pfam PF07233 Protein of unknown function (DUF1425) 30 119 2.9E-28 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 LK04_RS16170 f57f82ecfef0abd7aa81c1c2d14fdcd0 100 Pfam PF06366 Flagellar protein FlhE 14 98 7.9E-14 T 22-04-2016 IPR009420 Flagellar protein FlhE LK04_RS02145 73a395370253a54f0cae6bdb876f51aa 189 PANTHER PTHR37089 5 189 4.4E-19 T 22-04-2016 LK04_RS02145 73a395370253a54f0cae6bdb876f51aa 189 SMART SM00972 125 186 2.1E-11 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS02145 73a395370253a54f0cae6bdb876f51aa 189 Pfam PF05229 Spore Coat Protein U domain 27 185 3.4E-21 T 22-04-2016 IPR007893 Spore coat protein U LK04_RS17635 4aedcdbf858ad17d3a4c79e94c00f6d4 82 Pfam PF11106 Exopolysaccharide production protein YjbE 1 80 1.3E-28 T 22-04-2016 IPR025858 Exopolysaccharide production protein YjbE LK04_RS17535 4ef233c157cd52cec13b3c538f94d2e7 209 Pfam PF07947 YhhN-like protein 26 206 9.7E-40 T 22-04-2016 IPR012506 YhhN-like GO:0016021 LK04_RS04125 5f99c40e681e49b78cce11624410deae 208 Pfam PF06226 Protein of unknown function (DUF1007) 6 207 2.8E-61 T 22-04-2016 IPR010412 Protein of unknown function DUF1007 LK04_RS04125 5f99c40e681e49b78cce11624410deae 208 PIRSF PIRSF008159 1 208 6.8E-65 T 22-04-2016 IPR016537 Uncharacterised conserved protein UCP008159, LK04_RS05680 e7eedc3bb3d3b1dd742e0097d180ba1a 75 SUPERFAMILY SSF158651 1 75 4.71E-30 T 22-04-2016 LK04_RS05680 e7eedc3bb3d3b1dd742e0097d180ba1a 75 Gene3D G3DSA:1.10.3390.10 1 75 2.3E-36 T 22-04-2016 IPR023202 YejL-like domain LK04_RS05680 e7eedc3bb3d3b1dd742e0097d180ba1a 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 22.416 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 LK04_RS05680 e7eedc3bb3d3b1dd742e0097d180ba1a 75 PIRSF PIRSF006188 1 72 2.1E-33 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 LK04_RS05680 e7eedc3bb3d3b1dd742e0097d180ba1a 75 Pfam PF07208 Protein of unknown function (DUF1414) 27 69 8.7E-24 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 LK04_RS05680 e7eedc3bb3d3b1dd742e0097d180ba1a 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-25 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 LK04_RS01170 7247c68d7f716c60bb3664db816be411 200 Pfam PF01794 Ferric reductase like transmembrane component 48 161 2.1E-16 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain LK04_RS01170 7247c68d7f716c60bb3664db816be411 200 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 199 22.975 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 LK04_RS01170 7247c68d7f716c60bb3664db816be411 200 PANTHER PTHR36964 1 200 1.7E-67 T 22-04-2016 LK04_RS08770 0f574b860c1d01ad4e68ee609ff8334e 108 PANTHER PTHR36116:SF1 1 102 5.4E-44 T 22-04-2016 LK04_RS08770 0f574b860c1d01ad4e68ee609ff8334e 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 2.3E-42 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 LK04_RS08770 0f574b860c1d01ad4e68ee609ff8334e 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.899 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 LK04_RS08770 0f574b860c1d01ad4e68ee609ff8334e 108 PANTHER PTHR36116 1 102 5.4E-44 T 22-04-2016 LK04_RS08770 0f574b860c1d01ad4e68ee609ff8334e 108 SUPERFAMILY SSF103481 7 106 7.19E-6 T 22-04-2016 LK04_RS08855 e8f27623dc06e47325ab8f23ed71cb48 210 PIRSF PIRSF006324 1 209 7.1E-48 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS08855 e8f27623dc06e47325ab8f23ed71cb48 210 PANTHER PTHR30086:SF7 2 210 2.6E-95 T 22-04-2016 LK04_RS08855 e8f27623dc06e47325ab8f23ed71cb48 210 Pfam PF01810 LysE type translocator 17 207 9.8E-29 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS08855 e8f27623dc06e47325ab8f23ed71cb48 210 PANTHER PTHR30086 2 210 2.6E-95 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LK04_RS12425 9fe5a03de25b61ea088de53012d66563 369 Pfam PF03600 Citrate transporter 20 303 9.3E-24 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 LK04_RS12425 9fe5a03de25b61ea088de53012d66563 369 PANTHER PTHR10283:SF95 16 366 5.5E-56 T 22-04-2016 LK04_RS12425 9fe5a03de25b61ea088de53012d66563 369 PANTHER PTHR10283 16 366 5.5E-56 T 22-04-2016 LK04_RS08410 56b2fc06252e779773e24eef71a99169 82 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 15 72 5.2E-21 T 22-04-2016 IPR014321 Phage shock protein, PspD LK04_RS08410 56b2fc06252e779773e24eef71a99169 82 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 12 72 3.1E-30 T 22-04-2016 IPR014321 Phage shock protein, PspD LK04_RS16225 fbf3e19a77830c95833f714279527b24 243 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 53 215 7.1E-32 T 22-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 LK04_RS18835 e2e83e133587d3435f510aee192f778e 115 Pfam PF07119 Protein of unknown function (DUF1375) 16 78 1.9E-13 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 LK04_RS13560 32a577cf820a0c7fb536e0c6057c8290 214 Pfam PF09850 Type VI secretion system protein DotU 13 209 7.0E-39 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU LK04_RS13560 32a577cf820a0c7fb536e0c6057c8290 214 PANTHER PTHR38033:SF1 7 211 7.7E-24 T 22-04-2016 LK04_RS13560 32a577cf820a0c7fb536e0c6057c8290 214 PANTHER PTHR38033 7 211 7.7E-24 T 22-04-2016 LK04_RS13560 32a577cf820a0c7fb536e0c6057c8290 214 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 12 213 3.0E-34 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU LK04_RS14270 49910f26a437467355a28af3926c1ed2 63 Pfam PF16362 YaiA protein 1 63 3.2E-39 T 22-04-2016 IPR032303 YaiA protein LK04_RS10830 764b1714adf43a27d53d705305880ef6 130 SUPERFAMILY SSF54593 3 118 8.11E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS10830 764b1714adf43a27d53d705305880ef6 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 69 8.7E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LK04_RS10830 764b1714adf43a27d53d705305880ef6 130 Gene3D G3DSA:3.10.180.10 2 119 8.3E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS19780 768083d801892c8191b726ada9c76f31 309 Pfam PF01063 Amino-transferase class IV 36 268 1.1E-48 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LK04_RS19780 768083d801892c8191b726ada9c76f31 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 LK04_RS19780 768083d801892c8191b726ada9c76f31 309 PANTHER PTHR11825 1 306 1.8E-131 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LK04_RS19780 768083d801892c8191b726ada9c76f31 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 1.5E-142 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 LK04_RS19780 768083d801892c8191b726ada9c76f31 309 SUPERFAMILY SSF56752 7 307 1.14E-103 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LK04_RS19780 768083d801892c8191b726ada9c76f31 309 Gene3D G3DSA:3.20.10.10 135 295 2.0E-57 T 22-04-2016 LK04_RS19780 768083d801892c8191b726ada9c76f31 309 PANTHER PTHR11825:SF7 1 306 1.8E-131 T 22-04-2016 LK04_RS19780 768083d801892c8191b726ada9c76f31 309 Gene3D G3DSA:3.30.470.10 7 130 6.5E-43 T 22-04-2016 LK04_RS07130 08a89497a9c49aa6d4ab61648f16f70a 330 Gene3D G3DSA:3.60.110.10 3 303 8.6E-63 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS07130 08a89497a9c49aa6d4ab61648f16f70a 330 Pfam PF00795 Carbon-nitrogen hydrolase 218 282 3.2E-6 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS07130 08a89497a9c49aa6d4ab61648f16f70a 330 Pfam PF00795 Carbon-nitrogen hydrolase 6 192 6.3E-35 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS07130 08a89497a9c49aa6d4ab61648f16f70a 330 PANTHER PTHR23088 221 305 8.1E-53 T 22-04-2016 LK04_RS07130 08a89497a9c49aa6d4ab61648f16f70a 330 PANTHER PTHR23088 1 184 8.1E-53 T 22-04-2016 LK04_RS07130 08a89497a9c49aa6d4ab61648f16f70a 330 SUPERFAMILY SSF56317 3 177 5.1E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS07130 08a89497a9c49aa6d4ab61648f16f70a 330 SUPERFAMILY SSF56317 212 303 5.1E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LK04_RS11470 1a0207574a678e7f69119c2c364df044 84 Pfam PF13991 BssS protein family 11 82 1.0E-38 T 22-04-2016 IPR025730 Biofilm regulator BssS LK04_RS11470 1a0207574a678e7f69119c2c364df044 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 5.0E-29 T 22-04-2016 IPR025730 Biofilm regulator BssS LK04_RS16175 8925927cf72c339351f70796a206e5a6 128 Pfam PF06476 Protein of unknown function (DUF1090) 14 120 4.1E-34 T 22-04-2016 IPR009468 Protein of unknown function DUF1090 LK04_RS19165 f7e9acfcc8c9e3eff432db69509fae7e 91 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 6.0E-34 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 LK04_RS19165 f7e9acfcc8c9e3eff432db69509fae7e 91 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 2.5E-43 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 LK04_RS07525 78466edc43834de24f4e0c8eee46ae10 175 Pfam PF06995 Phage P2 GpU 6 125 9.4E-41 T 22-04-2016 IPR009734 Myoviridae, GpU LK04_RS07525 78466edc43834de24f4e0c8eee46ae10 175 PIRSF PIRSF029208 1 147 1.1E-53 T 22-04-2016 IPR016912 Bacteriophage P2, GpU LK04_RS05070 98fad260c68ab9d85bdfc7305c21650d 109 Pfam PF05135 Phage gp6-like head-tail connector protein 3 101 1.0E-18 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein LK04_RS05070 98fad260c68ab9d85bdfc7305c21650d 109 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 4 93 6.5E-7 T 22-04-2016 IPR006450 Phage protein of unkonwn function LK04_RS18080 d4659dd0342fe4a03379e6f4a00e6438 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 9 29 7.6E-7 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site LK04_RS16410 df77e3a5f848fa25bc6813033b1dfc15 150 Gene3D G3DSA:2.30.30.180 87 147 1.0E-13 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal LK04_RS16410 df77e3a5f848fa25bc6813033b1dfc15 150 SUPERFAMILY SSF74942 83 150 3.66E-17 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal LK04_RS16410 df77e3a5f848fa25bc6813033b1dfc15 150 PANTHER PTHR33867:SF1 1 150 7.6E-58 T 22-04-2016 LK04_RS16410 df77e3a5f848fa25bc6813033b1dfc15 150 PANTHER PTHR33867 1 150 7.6E-58 T 22-04-2016 LK04_RS16410 df77e3a5f848fa25bc6813033b1dfc15 150 Gene3D G3DSA:3.30.300.70 2 79 6.9E-33 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal LK04_RS16410 df77e3a5f848fa25bc6813033b1dfc15 150 Pfam PF02576 Putative ribosome maturation factor RimP 12 146 2.0E-48 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 LK04_RS16410 df77e3a5f848fa25bc6813033b1dfc15 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 24.25 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 LK04_RS16410 df77e3a5f848fa25bc6813033b1dfc15 150 SUPERFAMILY SSF75420 3 82 1.24E-24 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal LK04_RS01800 68e305f978b1363703259eeacfc8c28f 860 Pfam PF04411 PD-(D/E)XK nuclease superfamily 567 662 2.5E-6 T 22-04-2016 IPR007505 PD-(D/E)XK nuclease superfamily 7 LK04_RS14400 0482cb833ab3b859d589217196304c13 549 PANTHER PTHR30003 2 549 0.0 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 LK04_RS14400 0482cb833ab3b859d589217196304c13 549 Pfam PF02652 L-lactate permease 16 540 3.7E-225 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 LK04_RS14400 0482cb833ab3b859d589217196304c13 549 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 542 2.5E-234 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 LK04_RS14400 0482cb833ab3b859d589217196304c13 549 PANTHER PTHR30003:SF0 2 549 0.0 T 22-04-2016 LK04_RS06960 cdc89d98122a82e5b9a9c3912ca99912 103 PANTHER PTHR34653 1 103 3.8E-28 T 22-04-2016 LK04_RS06960 cdc89d98122a82e5b9a9c3912ca99912 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 103 2.1E-27 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LK04_RS06960 cdc89d98122a82e5b9a9c3912ca99912 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 18.607 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LK04_RS06960 cdc89d98122a82e5b9a9c3912ca99912 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 19 103 1.2E-29 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LK04_RS06960 cdc89d98122a82e5b9a9c3912ca99912 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 2.0E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LK04_RS06960 cdc89d98122a82e5b9a9c3912ca99912 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 2.0E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LK04_RS06960 cdc89d98122a82e5b9a9c3912ca99912 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 2.0E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LK04_RS02620 1102329c7402c15c25103b136d979139 274 PANTHER PTHR30535 19 267 1.7E-79 T 22-04-2016 LK04_RS02620 1102329c7402c15c25103b136d979139 274 Gene3D G3DSA:3.40.50.1980 19 137 2.1E-28 T 22-04-2016 LK04_RS02620 1102329c7402c15c25103b136d979139 274 Gene3D G3DSA:3.40.50.1980 138 267 3.9E-14 T 22-04-2016 LK04_RS02620 1102329c7402c15c25103b136d979139 274 Pfam PF01497 Periplasmic binding protein 22 242 9.2E-26 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LK04_RS02620 1102329c7402c15c25103b136d979139 274 SUPERFAMILY SSF53807 19 266 2.16E-46 T 22-04-2016 LK04_RS02620 1102329c7402c15c25103b136d979139 274 PANTHER PTHR30535:SF4 19 267 1.7E-79 T 22-04-2016 LK04_RS14310 5d766725badf777d10490fda6f2b77b6 84 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 83 1.9E-27 T 22-04-2016 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 LK04_RS06245 57de73feb4294477466275b69d0390e5 485 Pfam PF14264 Glucosyl transferase GtrII 34 326 5.3E-29 T 22-04-2016 IPR025686 Glucosyl transferase II LK04_RS07645 8b04a1e99dea89da1755e5592cf1202a 587 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 68 1.1E-23 T 22-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 LK04_RS07645 8b04a1e99dea89da1755e5592cf1202a 587 Pfam PF03237 Terminase-like family 162 569 7.3E-110 T 22-04-2016 IPR004921 Terminase, large subunit LK04_RS02290 fa3a8ba2f3d2a134684458e3ed868b3d 128 Pfam PF09345 Domain of unknown function (DUF1987) 13 111 7.0E-36 T 22-04-2016 IPR018530 Domain of unknown function DUF1987 LK04_RS16085 5b6343982993b7ee9f154fe0d6963723 251 SUPERFAMILY SSF57997 100 216 1.96E-6 T 22-04-2016 LK04_RS16085 5b6343982993b7ee9f154fe0d6963723 251 Gene3D G3DSA:1.10.287.950 133 199 1.5E-5 T 22-04-2016 LK04_RS15215 4a6f41c13af9e7bc81d7e359d0e1c208 445 Pfam PF07690 Major Facilitator Superfamily 30 388 1.9E-63 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LK04_RS15215 4a6f41c13af9e7bc81d7e359d0e1c208 445 PANTHER PTHR11662:SF18 20 421 4.6E-109 T 22-04-2016 LK04_RS15215 4a6f41c13af9e7bc81d7e359d0e1c208 445 PANTHER PTHR11662 20 421 4.6E-109 T 22-04-2016 LK04_RS15215 4a6f41c13af9e7bc81d7e359d0e1c208 445 SUPERFAMILY SSF103473 16 429 1.57E-86 T 22-04-2016 IPR020846 Major facilitator superfamily domain LK04_RS15215 4a6f41c13af9e7bc81d7e359d0e1c208 445 Gene3D G3DSA:1.20.1250.20 230 425 2.1E-27 T 22-04-2016 LK04_RS15215 4a6f41c13af9e7bc81d7e359d0e1c208 445 Gene3D G3DSA:1.20.1250.20 17 212 8.1E-53 T 22-04-2016 LK04_RS02805 0d3314e3ee4fec0c8ce87ed4ba4824b0 382 TIGRFAM TIGR01010 BexC_CtrB_KpsE: polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family 24 382 1.0E-139 T 22-04-2016 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD GO:0006859|GO:0009276|GO:0015542 LK04_RS07600 e32ec26793f705f6021a92df1280b4a1 155 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 129 2.1E-44 T 22-04-2016 IPR009678 Bacteriophage tail completion protein R LK04_RS01650 cf5101c0e3ebdd37012d7b2ad6987a87 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 2.2E-31 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB LK04_RS01650 cf5101c0e3ebdd37012d7b2ad6987a87 101 PANTHER PTHR35893 1 101 7.5E-56 T 22-04-2016 LK04_RS01650 cf5101c0e3ebdd37012d7b2ad6987a87 101 PANTHER PTHR35893:SF2 1 101 7.5E-56 T 22-04-2016 LK04_RS05015 4235dd6f37ae1bc3736e4e365c6ffe4a 117 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 110 6.1E-23 T 22-04-2016 IPR006481 Bacteriophage lambda, GpS, holin LK04_RS05015 4235dd6f37ae1bc3736e4e365c6ffe4a 117 Pfam PF05106 Phage holin family (Lysis protein S) 3 108 5.7E-27 T 22-04-2016 IPR006481 Bacteriophage lambda, GpS, holin LK04_RS07530 3edb09c18a28c5c1181c5b689dcf7195 820 Pfam PF10145 Phage-related minor tail protein 241 440 3.6E-36 T 22-04-2016 IPR010090 Phage tail tape measure protein LK04_RS07530 3edb09c18a28c5c1181c5b689dcf7195 820 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 203 546 8.7E-93 T 22-04-2016 IPR010090 Phage tail tape measure protein LK04_RS14455 a6ebf90682a9471bb84e37c798f4215f 435 Pfam PF01943 Polysaccharide biosynthesis protein 5 272 2.7E-12 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LK04_RS10480 a421095af877099af8da7700c1ec17cb 253 Pfam PF04338 Protein of unknown function, DUF481 47 252 1.6E-55 T 22-04-2016 IPR007433 Protein of unknown function DUF481 LK04_RS06505 724d7d3c97633ce944d0b98dc3b9c6d4 100 Gene3D G3DSA:1.10.260.40 32 84 1.1E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06505 724d7d3c97633ce944d0b98dc3b9c6d4 100 SUPERFAMILY SSF47413 19 96 3.66E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LK04_RS06505 724d7d3c97633ce944d0b98dc3b9c6d4 100 Pfam PF13744 Helix-turn-helix domain 31 88 6.8E-9 T 22-04-2016 LK04_RS06170 5897adf28dacc47534e1e7f385cdb673 371 Gene3D G3DSA:3.40.630.10 17 263 1.1E-17 T 22-04-2016 LK04_RS06170 5897adf28dacc47534e1e7f385cdb673 371 SUPERFAMILY SSF53187 18 110 5.62E-38 T 22-04-2016 LK04_RS06170 5897adf28dacc47534e1e7f385cdb673 371 SUPERFAMILY SSF53187 145 357 5.62E-38 T 22-04-2016 LK04_RS06170 5897adf28dacc47534e1e7f385cdb673 371 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 29 350 2.5E-27 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 LK04_RS16100 6491f2fbdf0befafb44da13d75f187a2 164 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 84 153 5.0E-16 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB LK04_RS16100 6491f2fbdf0befafb44da13d75f187a2 164 Pfam PF11776 Nickel/cobalt transporter regulator 104 153 1.1E-18 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB LK04_RS00015 4fe6348031a04961579a47727eccc8fb 184 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 179 21.273 T 22-04-2016 IPR022929 Putative manganese efflux pump MntP LK04_RS00015 4fe6348031a04961579a47727eccc8fb 184 Pfam PF02659 Putative manganese efflux pump 26 176 9.4E-52 T 22-04-2016 IPR003810 Putative manganese efflux pump LK04_RS00015 4fe6348031a04961579a47727eccc8fb 184 PANTHER PTHR35529 21 183 8.1E-58 T 22-04-2016 LK04_RS01490 b4215a01e7c28b0adc219d6a208235bf 137 Pfam PF07007 Protein of unknown function (DUF1311) 30 108 2.2E-14 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 LK04_RS15310 2b7d770e8ee56f378cdc1b993161c336 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 2.2E-156 T 22-04-2016 IPR031347 Protein AmpE LK04_RS15310 2b7d770e8ee56f378cdc1b993161c336 284 PANTHER PTHR38684 2 284 3.1E-96 T 22-04-2016 LK04_RS15165 041788af872860a563daf1b388903d4a 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 24 106 1.2E-10 T 22-04-2016 IPR019114 Chaperone lipoprotein, PulS/OutS-like LK04_RS15165 041788af872860a563daf1b388903d4a 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 1 115 2.0E-42 T 22-04-2016 LK04_RS07350 5557a32c7ba5b31534270850327e8ec6 184 Gene3D G3DSA:3.10.180.10 6 183 2.5E-73 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS07350 5557a32c7ba5b31534270850327e8ec6 184 PANTHER PTHR37519 1 184 2.0E-86 T 22-04-2016 LK04_RS07350 5557a32c7ba5b31534270850327e8ec6 184 SUPERFAMILY SSF54593 6 183 1.07E-63 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LK04_RS07350 5557a32c7ba5b31534270850327e8ec6 184 PANTHER PTHR37519:SF1 1 184 2.0E-86 T 22-04-2016 LK04_RS07350 5557a32c7ba5b31534270850327e8ec6 184 Pfam PF06185 YecM protein 7 182 3.6E-70 T 22-04-2016 IPR010393 Protein of unknown function DUF991 LK04_RS16150 e45e8ef7bf26a5e69cd4e1a4921c6dfd 113 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 2 105 23.197 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LK04_RS16150 e45e8ef7bf26a5e69cd4e1a4921c6dfd 113 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 10 99 6.0E-26 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LK04_RS16150 e45e8ef7bf26a5e69cd4e1a4921c6dfd 113 SUPERFAMILY SSF63592 4 99 1.11E-28 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LK04_RS16150 e45e8ef7bf26a5e69cd4e1a4921c6dfd 113 Pfam PF05247 Flagellar transcriptional activator (FlhD) 5 100 2.3E-32 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 LK04_RS01825 ac0f0f6f8daad50c2830caa68570d631 245 SUPERFAMILY SSF103088 87 214 8.11E-15 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS01825 ac0f0f6f8daad50c2830caa68570d631 245 Pfam PF00691 OmpA family 99 172 5.3E-7 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS01825 ac0f0f6f8daad50c2830caa68570d631 245 Gene3D G3DSA:3.30.1330.60 81 214 4.0E-15 T 22-04-2016 IPR006665 OmpA-like domain LK04_RS01825 ac0f0f6f8daad50c2830caa68570d631 245 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 42 4.8E-6 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain LK04_RS09595 b0306392d36c8a24bd10e0da9ba03f88 691 SUPERFAMILY SSF56935 14 688 1.47E-121 T 22-04-2016 LK04_RS09595 b0306392d36c8a24bd10e0da9ba03f88 691 PANTHER PTHR32552 12 688 0.0 T 22-04-2016 LK04_RS09595 b0306392d36c8a24bd10e0da9ba03f88 691 Pfam PF07715 TonB-dependent Receptor Plug Domain 33 144 1.4E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS09595 b0306392d36c8a24bd10e0da9ba03f88 691 PANTHER PTHR32552:SF13 12 688 0.0 T 22-04-2016 LK04_RS09595 b0306392d36c8a24bd10e0da9ba03f88 691 Gene3D G3DSA:2.40.170.20 145 687 3.7E-110 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS09595 b0306392d36c8a24bd10e0da9ba03f88 691 Gene3D G3DSA:2.170.130.10 19 144 6.4E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LK04_RS09595 b0306392d36c8a24bd10e0da9ba03f88 691 Pfam PF00593 TonB dependent receptor 439 686 1.0E-37 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LK04_RS14250 5b194063b4774d6c41c7783506a865d0 225 Pfam PF07302 AroM protein 6 224 1.1E-83 T 22-04-2016 IPR010843 Uncharacterised protein family AroM LK04_RS14250 5b194063b4774d6c41c7783506a865d0 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 2.0E-55 T 22-04-2016 IPR010843 Uncharacterised protein family AroM LK04_RS11535 2f1fb80be4c43d33cc4f81b9bf6622f8 382 Gene3D G3DSA:3.20.20.80 45 327 6.0E-18 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LK04_RS11535 2f1fb80be4c43d33cc4f81b9bf6622f8 382 SUPERFAMILY SSF51445 38 351 1.27E-38 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LK04_RS11715 db93243d9ed6f62241db586d5655e7bd 463 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LK04_RS11715 db93243d9ed6f62241db586d5655e7bd 463 PIRSF PIRSF006060 2 462 7.9E-67 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS11715 db93243d9ed6f62241db586d5655e7bd 463 Pfam PF00324 Amino acid permease 26 461 2.6E-111 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LK04_RS11715 db93243d9ed6f62241db586d5655e7bd 463 PANTHER PTHR11785 3 462 5.5E-203 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LK04_RS11715 db93243d9ed6f62241db586d5655e7bd 463 PANTHER PTHR11785:SF336 3 462 5.5E-203 T 22-04-2016 LK04_RS11620 1bfefce57206b2cc4e66fa2d01f1ea79 243 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 23 238 3.0E-66 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal LK04_RS06850 36fea22b04b261109b3a36f751e13246 303 PIRSF PIRSF016660 1 303 5.0E-124 T 22-04-2016 IPR008526 Inner membrane protein YedI LK04_RS06850 36fea22b04b261109b3a36f751e13246 303 PANTHER PTHR30503 2 303 6.6E-101 T 22-04-2016 LK04_RS06850 36fea22b04b261109b3a36f751e13246 303 Pfam PF05661 Protein of unknown function (DUF808) 4 290 5.7E-114 T 22-04-2016 IPR008526 Inner membrane protein YedI LK04_RS11690 7987ca9bf1f60b36ff95c909006786a9 75 Pfam PF10769 Protein of unknown function (DUF2594) 1 75 2.3E-37 T 22-04-2016 IPR019705 Protein of unknown function DUF2594 LK04_RS04495 7c5d84fcb62690388867141c15cbb7e5 92 PANTHER PTHR38603 1 85 1.2E-23 T 22-04-2016 LK04_RS04495 7c5d84fcb62690388867141c15cbb7e5 92 Pfam PF03927 NapD protein 7 83 1.3E-23 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly LK04_RS18560 6879ce760da6757bd99b285a4f28e699 74 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 63 3.0E-9 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family LK04_RS01660 86657a6343dc32623c566403d7963ed5 122 Hamap MF_00904 Modulator protein MzrA [mzrA]. 2 116 25.685 T 22-04-2016 IPR026574 Modulator protein MzrA LK04_RS01660 86657a6343dc32623c566403d7963ed5 122 Pfam PF13721 SecD export protein N-terminal TM region 17 104 5.9E-17 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain LK04_RS08825 d755f19bb1ff84280f7f1ff53adc4c2b 160 Pfam PF09722 Protein of unknown function (DUF2384) 108 157 5.8E-10 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 LK04_RS08825 d755f19bb1ff84280f7f1ff53adc4c2b 160 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 34 159 2.7E-25 T 22-04-2016 IPR011979 Conserved hypothetical protein CHP02293 LK04_RS05130 b5fad3cef30434872be305c31e3c5ac7 355 PANTHER PTHR37829 5 355 3.5E-86 T 22-04-2016 LK04_RS05130 b5fad3cef30434872be305c31e3c5ac7 355 Pfam PF04865 Baseplate J-like protein 72 320 6.4E-65 T 22-04-2016 IPR006949 Baseplate protein J-like LK04_RS13500 aa87a0b30e3d858ec3a87e29e68405a6 155 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 94 148 5.0E-5 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB LK04_RS13500 aa87a0b30e3d858ec3a87e29e68405a6 155 Pfam PF11776 Nickel/cobalt transporter regulator 97 147 1.0E-22 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB LK04_RS05095 74dacf330bed909bc5219998e9398248 118 Pfam PF10618 Phage tail tube protein 1 115 4.8E-36 T 22-04-2016 IPR019596 Bacteriophage Mu, GpM, tail tube LK04_RS11610 43e5e600933bc6934c5da92ec918d1db 85 SUPERFAMILY SSF47336 2 83 1.1E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS11610 43e5e600933bc6934c5da92ec918d1db 85 Gene3D G3DSA:1.10.1200.10 2 83 1.6E-18 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS11610 43e5e600933bc6934c5da92ec918d1db 85 Pfam PF00550 Phosphopantetheine attachment site 12 62 2.2E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LK04_RS05005 c046d364591dc83be482372cf04f9610 142 Pfam PF06530 Phage antitermination protein Q 2 123 3.0E-42 T 22-04-2016 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 LK04_RS06100 deecea83f5a44a0aa714e2fa4d453a4b 407 PANTHER PTHR12526 1 39 4.3E-58 T 22-04-2016 LK04_RS06100 deecea83f5a44a0aa714e2fa4d453a4b 407 PANTHER PTHR12526 68 407 4.3E-58 T 22-04-2016 LK04_RS06100 deecea83f5a44a0aa714e2fa4d453a4b 407 PANTHER PTHR12526:SF375 1 39 4.3E-58 T 22-04-2016 LK04_RS06100 deecea83f5a44a0aa714e2fa4d453a4b 407 PANTHER PTHR12526:SF375 68 407 4.3E-58 T 22-04-2016 LK04_RS06100 deecea83f5a44a0aa714e2fa4d453a4b 407 SUPERFAMILY SSF53756 15 406 1.12E-57 T 22-04-2016 LK04_RS06100 deecea83f5a44a0aa714e2fa4d453a4b 407 Pfam PF00534 Glycosyl transferases group 1 214 369 9.3E-36 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LK04_RS06100 deecea83f5a44a0aa714e2fa4d453a4b 407 Gene3D G3DSA:3.40.50.2000 196 370 1.1E-24 T 22-04-2016 LK04_RS03020 1b0b519c8e06adaa717dd7864d748770 138 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 26 131 6.0E-8 T 22-04-2016 IPR009883 Toxin CptA LK04_RS03020 1b0b519c8e06adaa717dd7864d748770 138 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 4 128 8.5E-33 T 22-04-2016 IPR009883 Toxin CptA LK04_RS05035 001d1bfb854adc13dc5cd00fc56569b4 112 PANTHER PTHR41286 1 108 5.5E-13 T 22-04-2016 LK04_RS05035 001d1bfb854adc13dc5cd00fc56569b4 112 SMART SM00507 13 82 1.1E-6 T 22-04-2016 IPR003615 HNH nuclease LK04_RS05035 001d1bfb854adc13dc5cd00fc56569b4 112 Pfam PF01844 HNH endonuclease 25 83 1.6E-4 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 LK04_RS10205 291f4fd761f90396f0ed137312d0fe4c 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.7E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 LK04_RS10205 291f4fd761f90396f0ed137312d0fe4c 155 PANTHER PTHR35603 1 155 1.7E-50 T 22-04-2016 LK04_RS10205 291f4fd761f90396f0ed137312d0fe4c 155 PANTHER PTHR35603:SF1 1 155 1.7E-50 T 22-04-2016 LK04_RS01550 58e68bc5f46243c7ab07de46806b6edf 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 237 9.4E-122 T 22-04-2016 IPR020042 Protein of unknown function DUF4311 LK04_RS01550 58e68bc5f46243c7ab07de46806b6edf 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 1.6E-152 T 22-04-2016 IPR020042 Protein of unknown function DUF4311 LK04_RS06640 0674f751124001a7eb4c55c610173bef 149 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 5 147 1.2E-52 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 LK04_RS06640 0674f751124001a7eb4c55c610173bef 149 Pfam PF06754 Phosphonate metabolism protein PhnG 6 146 7.6E-54 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 LK04_RS12275 604176790a19a5d3a80106ff0928499e 159 Pfam PF10722 Putative bacterial sensory transduction regulator 9 131 7.9E-14 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN LK04_RS07010 1464088490372c7ddc00e0be9c941d4a 97 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 85 5.6E-29 T 22-04-2016 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 LK04_RS07990 8cb6175a4070c815085fe2324bd78bba 93 Pfam PF07023 Protein of unknown function (DUF1315) 6 84 1.3E-28 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 LK04_RS01645 423a7faa3c5028130157d7baf19d62ac 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 18 126 2.1E-22 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III LK04_RS01645 423a7faa3c5028130157d7baf19d62ac 131 Gene3D G3DSA:1.20.1250.20 51 109 0.001 T 22-04-2016 LK04_RS06650 655d4572e4c06552597f6ad3548f7b9a 358 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 351 6.5E-157 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 LK04_RS06650 655d4572e4c06552597f6ad3548f7b9a 358 PIRSF PIRSF007313 1 358 4.1E-161 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 LK04_RS10495 a80f6c5fe1254094365fd103c8fbda04 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 178 2.0E-73 T 22-04-2016 LK04_RS10495 a80f6c5fe1254094365fd103c8fbda04 178 Pfam PF14002 YniB-like protein 15 177 2.6E-81 T 22-04-2016 IPR025229 YniB-like protein LK04_RS09995 bf8ef60b5667a2bd80d06202d2ad5324 299 Pfam PF03837 RecT family 33 204 1.9E-25 T 22-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 LK04_RS05135 2ae18e2fa1b3d527369a089cf006b547 193 PANTHER PTHR40610 1 193 3.6E-38 T 22-04-2016 LK04_RS05135 2ae18e2fa1b3d527369a089cf006b547 193 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 11 192 2.9E-41 T 22-04-2016 IPR018755 Bacteriophage Mu, Gp48 LK04_RS12740 3aef3cff0a6c7314b523f8dc6112099c 195 Pfam PF06930 Protein of unknown function (DUF1282) 7 177 3.6E-45 T 22-04-2016 IPR009698 Protein of unknown function DUF1282 LK04_RS01545 9e87a1150f495890678308653b2dd492 99 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 3 96 4.9E-39 T 22-04-2016 IPR020037 Protein of unknown function DUF4312 LK04_RS01545 9e87a1150f495890678308653b2dd492 99 Pfam PF14189 Domain of unknown function (DUF4312) 6 88 1.9E-37 T 22-04-2016 IPR020037 Protein of unknown function DUF4312 LK04_RS15135 30f615ec7a9a0eb3973a9e1974c9d069 337 Pfam PF01757 Acyltransferase family 5 310 6.0E-15 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LK04_RS09360 ee48b91e9b5a65e846c498446f7adec4 192 PANTHER PTHR11839 15 188 2.9E-28 T 22-04-2016 LK04_RS09360 ee48b91e9b5a65e846c498446f7adec4 192 Gene3D G3DSA:3.90.79.10 15 187 4.6E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS09360 ee48b91e9b5a65e846c498446f7adec4 192 SUPERFAMILY SSF55811 16 189 5.79E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LK04_RS09360 ee48b91e9b5a65e846c498446f7adec4 192 PANTHER PTHR11839:SF9 15 188 2.9E-28 T 22-04-2016 LK04_RS06865 e855ab1145dd194f910afa50d06b0bd7 406 SUPERFAMILY SSF53448 39 403 1.6E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LK04_RS05380 4b33633e8e618859d4fbe4cd7278ac7e 161 PANTHER PTHR36926:SF1 1 160 3.8E-84 T 22-04-2016 LK04_RS05380 4b33633e8e618859d4fbe4cd7278ac7e 161 PANTHER PTHR36926 1 160 3.8E-84 T 22-04-2016 LK04_RS05380 4b33633e8e618859d4fbe4cd7278ac7e 161 Pfam PF02674 Colicin V production protein 4 142 4.1E-38 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 LK04_RS12350 6b7f767f08b67fb3a122e99602c3074b 149 Pfam PF14328 Domain of unknown function (DUF4385) 5 147 1.4E-67 T 22-04-2016 IPR025494 Protein of unknown function DUF4385 LK04_RS18695 2d16853eba8d968f5db253905e695a24 346 Pfam PF01757 Acyltransferase family 6 315 3.3E-23 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LK04_RS07620 045ea5684ba4c6227894b430ab5dd0b2 68 Pfam PF05489 Phage Tail Protein X 3 59 6.5E-27 T 22-04-2016 IPR008861 Phage Tail Protein X-like LK04_RS08975 5373d6df37d84aa774ba0a031aa068a5 69 Pfam PF05433 Glycine zipper 2TM domain 31 67 6.3E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 LK04_RS18855 8fad896ba1d7c53f4141cf64d6bf2f66 266 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 144 252 4.2E-6 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 LK04_RS03835 03e4e37edb7338d30c7852092c6a62e8 112 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 7.2E-62 T 22-04-2016 IPR018994 Protein of unknown function DUF2002 LK04_RS03835 03e4e37edb7338d30c7852092c6a62e8 112 SUPERFAMILY SSF159894 1 111 5.49E-60 T 22-04-2016 LK04_RS16740 8d750ac7e144350008d16e05c292a9a6 115 Pfam PF13698 Domain of unknown function (DUF4156) 23 114 1.8E-32 T 22-04-2016 IPR025294 Protein of unknown function DUF4156 LK04_RS09010 ba55fae1ae63d40dd7c59fd62972d140 219 Pfam PF07077 Protein of unknown function (DUF1345) 37 209 1.5E-56 T 22-04-2016 IPR009781 Protein of unknown function DUF1345 LK04_RS17235 27209cc0ec8b97629f026c1ce51996d0 316 Pfam PF14305 TupA-like ATPgrasp 60 290 1.5E-39 T 22-04-2016 IPR029465 TupA-like ATPgrasp protein LK04_RS00560 1c7761464ca5e626bc06bbee32cb4453 80 Pfam PF11106 Exopolysaccharide production protein YjbE 1 76 1.4E-28 T 22-04-2016 IPR025858 Exopolysaccharide production protein YjbE LK04_RS06500 41406b4b375ad134424a081a4fa14d85 117 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 19 106 2.9E-20 T 22-04-2016 IPR009241 Toxin HigB-like LK04_RS05785 3f7d8c26782e70f9ef26e84b5ce8fad0 125 Pfam PF06803 Protein of unknown function (DUF1232) 33 68 2.1E-13 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 LK04_RS04275 564b097d859540a1b3c46c6c278c1ed7 59 Pfam PF09926 Uncharacterized small protein (DUF2158) 3 24 1.6E-5 T 22-04-2016 IPR019226 Protein of unknown function DUF2158 LK04_RS12440 e00dd2f50a7bcf5be1193bb608f17000 242 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 60 213 8.3E-34 T 22-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 LK04_RS01015 0ab3ccad99eeac3e397a2f74508a4dfd 72 Pfam PF03889 Domain of unknown function 9 45 1.8E-22 T 22-04-2016 IPR005589 Protein of unknown function DUF331 LK04_RS10110 eff6588fb3fe862ff324a9ff38079239 147 Pfam PF10754 Protein of unknown function (DUF2569) 8 145 1.1E-42 T 22-04-2016 IPR019690 Protein of unknown function DUF2569 LK04_RS12830 19b019b01404c1bac1503a58267e9088 364 Pfam PF07759 Protein of unknown function (DUF1615) 49 363 2.5E-146 T 22-04-2016 IPR011673 Protein of unknown function DUF1615 LK04_RS12830 19b019b01404c1bac1503a58267e9088 364 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 20 363 2.0E-131 T 22-04-2016 IPR011673 Protein of unknown function DUF1615 LK04_RS10710 76bff8a414fcd1469be06a64f0cb265f 96 Pfam PF11140 Protein of unknown function (DUF2913) 16 89 6.2E-5 T 22-04-2016 IPR021316 Protein of unknown function DUF2913 LK04_RS04290 41dc4891520149d1351b554c44aea60a 62 Pfam PF11119 Protein of unknown function (DUF2633) 8 47 2.5E-15 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 LK04_RS04290 41dc4891520149d1351b554c44aea60a 62 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 8 48 2.0E-5 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 LK04_RS13750 09341789e38379202a1c2c1c065672e3 143 PANTHER PTHR42641:SF2 1 136 1.0E-71 T 22-04-2016 LK04_RS13750 09341789e38379202a1c2c1c065672e3 143 Pfam PF05232 Chlorhexidine efflux transporter 4 66 7.6E-27 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter LK04_RS13750 09341789e38379202a1c2c1c065672e3 143 Pfam PF05232 Chlorhexidine efflux transporter 71 134 8.5E-23 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter LK04_RS13750 09341789e38379202a1c2c1c065672e3 143 PANTHER PTHR42641 1 136 1.0E-71 T 22-04-2016 LK04_RS09990 61d1615b7efc93f4e69226ff977fba8d 272 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 21 255 1.5E-28 T 22-04-2016 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain LK04_RS16125 2e271d2146353e0b24454213502536a4 349 Pfam PF06674 Protein of unknown function (DUF1176) 27 342 2.7E-108 T 22-04-2016 IPR009560 Protein of unknown function DUF1176 LK04_RS08240 ac037e15ed0c3b336f84df77e9390c4c 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 81 2.2E-39 T 22-04-2016 IPR019633 Protein of unknown function DUF2498 LK04_RS00615 e78e366d4007d18d892d8c801edc654e 180 Pfam PF05137 Fimbrial assembly protein (PilN) 102 173 4.8E-9 T 22-04-2016 IPR007813 Fimbrial assembly PilN LK04_RS01470 f6a0be95bbf36c845dce772368c66779 1256 PANTHER PTHR36985 1 1256 0.0 T 22-04-2016 LK04_RS01470 f6a0be95bbf36c845dce772368c66779 1256 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 921 1256 2.5E-67 T 22-04-2016 IPR007452 Translocation and assembly module TamB LK04_RS19760 da735bc2a092c1c8165cdef4bbbf298e 112 Pfam PF04219 Protein of unknown function, DUF 10 98 3.6E-38 T 22-04-2016 IPR007335 Protein of unknown function DUF413 LK04_RS17720 de6f92ca9b715f33e9a98123ff82c3fe 221 Pfam PF07356 Protein of unknown function (DUF1481) 32 216 1.1E-64 T 22-04-2016 IPR010858 Protein of unknown function DUF1481 LK04_RS07690 65455b4f8bf96041e9fd048ced95f38b 169 Pfam PF06892 Phage regulatory protein CII (CP76) 4 160 2.6E-72 T 22-04-2016 IPR009679 Bacteriophage 186, CII LK04_RS01655 38bbe73a4870f519de34cc1545ec96a6 129 Pfam PF06476 Protein of unknown function (DUF1090) 20 123 7.1E-34 T 22-04-2016 IPR009468 Protein of unknown function DUF1090 LK04_RS07605 a78761f0438cc28712f673f9c3380998 149 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 4 136 4.9E-29 T 22-04-2016 IPR020000 Bacteriophage P2, LysB LK04_RS09745 c7525e276a71184c992fab20005fb739 133 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 21 131 1.5E-21 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly LK04_RS09710 e52ee071a617be50dc9092bb0fd2a1f2 499 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 481 3.1E-135 T 22-04-2016 IPR010352 Protein of unknown function DUF945 LK04_RS09630 f3ca024400253556dc56c112289d9565 790 Pfam PF10139 Putative bacterial virulence factor 26 440 9.2E-71 T 22-04-2016 IPR017030 Virulence effector, SrfC LK04_RS09630 f3ca024400253556dc56c112289d9565 790 Pfam PF10139 Putative bacterial virulence factor 439 780 2.0E-62 T 22-04-2016 IPR017030 Virulence effector, SrfC LK04_RS16915 605bc0680d18b14d9e531ef50615959a 309 Pfam PF04932 O-Antigen ligase 88 243 6.1E-13 T 22-04-2016 IPR007016 O-antigen ligase-related LK04_RS07510 db0cfd23742313556b230d12b02b7f63 115 Pfam PF10709 Protein of unknown function (DUF2511) 26 113 1.3E-36 T 22-04-2016 IPR019648 Protein of unknown function DUF2511 LK04_RS10020 e6de6862daf61a94302c69b268dcd683 82 Pfam PF06806 Putative excisionase (DUF1233) 5 73 6.4E-33 T 22-04-2016 IPR009634 Bacteriophage 933W, Xis excisionase LK04_RS04270 268aaa619d59b2c94b91cf28bf92d453 258 Pfam PF12570 Protein of unknown function (DUF3750) 59 188 6.0E-53 T 22-04-2016 IPR022224 Protein of unknown function DUF3750 LK04_RS15725 b62bb72d875c49adf5c820450fd5692c 323 Pfam PF13503 Domain of unknown function (DUF4123) 32 164 6.8E-9 T 22-04-2016 IPR025391 Domain of unknown function DUF4123 LK04_RS06240 12ace96c0a474a95c2681a03f8bb43c8 289 Pfam PF01757 Acyltransferase family 17 263 2.7E-10 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LK04_RS14260 3849cda47304303e05c2541f5bfcc791 519 Pfam PF03169 OPT oligopeptide transporter protein 17 225 1.4E-9 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 LK04_RS14260 3849cda47304303e05c2541f5bfcc791 519 Pfam PF03169 OPT oligopeptide transporter protein 213 513 1.9E-19 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 LK04_RS07665 ded70da232c18a2efc671db2db1b2cdb 761 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 169 526 3.5E-145 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 LK04_RS01640 baaa00a70fe25d2b8db99dc330ee53d0 94 Pfam PF13997 YqjK-like protein 13 85 1.9E-28 T 22-04-2016 IPR025612 YqjK-like protein LK04_RS08025 262de55a4fac0c915caf5c9fe7e4d37c 97 Pfam PF07383 Protein of unknown function (DUF1496) 40 97 1.8E-26 T 22-04-2016 IPR009971 Protein of unknown function DUF1496 LK04_RS09780 188f387cc618bc2e993f09d9b62efee1 1047 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 402 475 9.0E-21 T 22-04-2016 IPR013491 Caudovirus, tape measure, N-terminal LK04_RS07090 884d28928079af5821af3056716fc2ae 360 Pfam PF01757 Acyltransferase family 10 327 1.7E-19 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LK04_RS08460 d18e10f956a3a8780e94731c30638029 66 Pfam PF10965 Protein of unknown function (DUF2767) 5 60 1.3E-6 T 22-04-2016 IPR024493 Protein of unknown function DUF2767 LK04_RS11775 b939a065b23ac203714e64f982275050 76 Pfam PF13993 YccJ-like protein 9 76 1.2E-37 T 22-04-2016 IPR025600 YccJ-like protein LK04_RS09775 0e08164eb5c74378a4ad56db069cb1d9 117 Pfam PF05939 Phage minor tail protein 3 115 3.4E-32 T 22-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail LK04_RS13590 ce8bcce06831fd3e3bd7026334e900dc 200 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 94 7.5E-10 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LK04_RS14305 f3c54cd559db709bed7a7eb65fe224fe 100 Pfam PF07769 psiF repeat 66 98 3.5E-17 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat LK04_RS14305 f3c54cd559db709bed7a7eb65fe224fe 100 Pfam PF07769 psiF repeat 24 57 2.1E-17 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat LK04_RS09760 935fd891d0b1aae4ddf73cf84e7023e5 174 Pfam PF06805 Bacteriophage lambda tail assembly protein I 8 84 6.0E-6 T 22-04-2016 IPR010654 Bacteriophage lambda tail assembly I LK04_RS07085 5a3c906c21676f61826076c73da8f94d 362 Pfam PF01757 Acyltransferase family 9 326 1.4E-24 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LK04_RS09895 7ded172d650ffb4210a92495d8f6de9c 205 Pfam PF05766 Bacteriophage Lambda NinG protein 6 197 5.4E-70 T 22-04-2016 IPR008713 Bacteriophage lambda NinG LK04_RS12805 0b2334179e325ab579e5be4a4aaaadd1 130 Pfam PF11076 Putative inner membrane protein YbhQ 1 124 3.2E-61 T 22-04-2016 IPR021303 Uncharacterised protein family, inner membrane, YbhQ LK04_RS11085 04ef315022ae10bb4f2b9e323f566259 68 Pfam PF10965 Protein of unknown function (DUF2767) 1 66 6.5E-31 T 22-04-2016 IPR024493 Protein of unknown function DUF2767 LK04_RS17610 b200f3b163f2cd19db14a0173459b306 111 Pfam PF05656 Protein of unknown function (DUF805) 18 100 5.6E-8 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021