locus-tag class description DMB87_RS00005 PF11638 DnaA N-terminal domain DMB87_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DMB87_RS00005 PF00308 Bacterial dnaA protein DMB87_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DMB87_RS00010 PF02767 DNA polymerase III beta subunit, central domain DMB87_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DMB87_RS00020 PF18053 DNA gyrase B subunit insert domain DMB87_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS00020 PF01751 Toprim domain DMB87_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus DMB87_RS00020 PF00204 DNA gyrase B DMB87_RS00040 PF00171 Aldehyde dehydrogenase family DMB87_RS00075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMB87_RS00075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DMB87_RS00080 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DMB87_RS00080 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DMB87_RS00085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS00085 PF03466 LysR substrate binding domain DMB87_RS00090 PF01131 DNA topoisomerase DMB87_RS00090 PF01751 Toprim domain DMB87_RS00100 PF17782 DprA winged helix domain DMB87_RS00100 PF02481 DNA recombination-mediator protein A DMB87_RS00105 PF01327 Polypeptide deformylase DMB87_RS00110 PF02911 Formyl transferase, C-terminal domain DMB87_RS00110 PF00551 Formyl transferase DMB87_RS00115 PF01810 LysE type translocator DMB87_RS00120 PF01435 Peptidase family M48 DMB87_RS00125 PF01189 16S rRNA methyltransferase RsmB/F DMB87_RS00125 PF01029 NusB family DMB87_RS00135 PF00989 PAS fold DMB87_RS00135 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS00135 PF00672 HAMP domain DMB87_RS00140 PF00072 Response regulator receiver domain DMB87_RS00140 PF00158 Sigma-54 interaction domain DMB87_RS00140 PF02954 Bacterial regulatory protein, Fis family DMB87_RS00140 PF00072 Response regulator receiver domain DMB87_RS00140 PF00158 Sigma-54 interaction domain DMB87_RS00140 PF02954 Bacterial regulatory protein, Fis family DMB87_RS00150 PF06508 Queuosine biosynthesis protein QueC DMB87_RS00160 PF01242 6-pyruvoyl tetrahydropterin synthase DMB87_RS00165 PF03328 HpcH/HpaI aldolase/citrate lyase family DMB87_RS00180 PF01098 Cell cycle protein DMB87_RS00185 PF00905 Penicillin binding protein transpeptidase domain DMB87_RS00185 PF03717 Penicillin-binding Protein dimerisation domain DMB87_RS00205 PF02686 Glu-tRNAGln amidotransferase C subunit DMB87_RS00210 PF01425 Amidase DMB87_RS00215 PF02637 GatB domain DMB87_RS00215 PF02934 GatB/GatE catalytic domain DMB87_RS00220 PF03976 Polyphosphate kinase 2 (PPK2) DMB87_RS00225 PF03372 Endonuclease/Exonuclease/phosphatase family DMB87_RS00235 PF07690 Major Facilitator Superfamily DMB87_RS00245 PF00561 alpha/beta hydrolase fold DMB87_RS00255 PF00440 Bacterial regulatory proteins, tetR family DMB87_RS00265 PF00696 Amino acid kinase family DMB87_RS00285 PF00072 Response regulator receiver domain DMB87_RS00285 PF02954 Bacterial regulatory protein, Fis family DMB87_RS00290 PF00004 ATPase family associated with various cellular activities (AAA) DMB87_RS00290 PF07724 AAA domain (Cdc48 subfamily) DMB87_RS00295 PF00227 Proteasome subunit DMB87_RS00300 PF01258 Prokaryotic dksA/traR C4-type zinc finger DMB87_RS00305 PF07683 Cobalamin synthesis protein cobW C-terminal domain DMB87_RS00305 PF02492 CobW/HypB/UreG, nucleotide-binding domain DMB87_RS00310 PF03895 YadA-like membrane anchor domain DMB87_RS00310 PF05658 Head domain of trimeric autotransporter adhesin DMB87_RS00310 PF05662 Coiled stalk of trimeric autotransporter adhesin DMB87_RS00310 PF13018 Extended Signal Peptide of Type V secretion system DMB87_RS00315 PF17785 PUA-like domain DMB87_RS00315 PF10672 S-adenosylmethionine-dependent methyltransferase DMB87_RS00320 PF00589 Phage integrase family DMB87_RS00320 PF02899 Phage integrase, N-terminal SAM-like domain DMB87_RS00330 PF01678 Diaminopimelate epimerase DMB87_RS00335 PF03279 Bacterial lipid A biosynthesis acyltransferase DMB87_RS00340 PF02772 S-adenosylmethionine synthetase, central domain DMB87_RS00340 PF02773 S-adenosylmethionine synthetase, C-terminal domain DMB87_RS00340 PF00438 S-adenosylmethionine synthetase, N-terminal domain DMB87_RS00360 PF00248 Aldo/keto reductase family DMB87_RS00375 PF07690 Major Facilitator Superfamily DMB87_RS00380 PF02321 Outer membrane efflux protein DMB87_RS00390 PF00873 AcrB/AcrD/AcrF family DMB87_RS00400 PF01636 Phosphotransferase enzyme family DMB87_RS00420 PF02625 XdhC and CoxI family DMB87_RS00420 PF13478 XdhC Rossmann domain DMB87_RS00440 PF00941 FAD binding domain in molybdopterin dehydrogenase DMB87_RS00440 PF03450 CO dehydrogenase flavoprotein C-terminal domain DMB87_RS00445 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DMB87_RS00445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DMB87_RS00450 PF01799 [2Fe-2S] binding domain DMB87_RS00450 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS00455 PF13520 Amino acid permease DMB87_RS00460 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS00460 PF00072 Response regulator receiver domain DMB87_RS00465 PF05231 MASE1 DMB87_RS00465 PF07730 Histidine kinase DMB87_RS00465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS00470 PF00175 Oxidoreductase NAD-binding domain DMB87_RS00470 PF00970 Oxidoreductase FAD-binding domain DMB87_RS00475 PF01810 LysE type translocator DMB87_RS00480 PF03372 Endonuclease/Exonuclease/phosphatase family DMB87_RS00490 PF01266 FAD dependent oxidoreductase DMB87_RS00495 PF01355 High potential iron-sulfur protein DMB87_RS00500 PF01425 Amidase DMB87_RS00505 PF01738 Dienelactone hydrolase family DMB87_RS00515 PF13458 Periplasmic binding protein DMB87_RS00520 PF07690 Major Facilitator Superfamily DMB87_RS00530 PF00816 H-NS histone family DMB87_RS00535 PF01545 Cation efflux family DMB87_RS00535 PF16916 Dimerisation domain of Zinc Transporter DMB87_RS00540 PF01037 Lrp/AsnC ligand binding domain DMB87_RS00550 PF00753 Metallo-beta-lactamase superfamily DMB87_RS00555 PF03330 Lytic transglycolase DMB87_RS00555 PF05036 Sporulation related domain DMB87_RS00560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMB87_RS00565 PF02021 Uncharacterised protein family UPF0102 DMB87_RS00570 PF13580 SIS domain DMB87_RS00595 PF10134 Replication initiator protein A DMB87_RS00600 PF01026 TatD related DNase DMB87_RS00635 PF17273 Family of unknown function (DUF5338) DMB87_RS00655 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DMB87_RS00695 PF12161 HsdM N-terminal domain DMB87_RS00695 PF02384 N-6 DNA Methylase DMB87_RS00700 PF01420 Type I restriction modification DNA specificity domain DMB87_RS00715 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DMB87_RS00715 PF18766 SWI2/SNF2 ATPase DMB87_RS00715 PF11867 Domain of unknown function (DUF3387) DMB87_RS00740 PF00176 SNF2 family N-terminal domain DMB87_RS00740 PF00271 Helicase conserved C-terminal domain DMB87_RS00745 PF00589 Phage integrase family DMB87_RS00760 PF00267 Gram-negative porin DMB87_RS00780 PF05114 Protein of unknown function (DUF692) DMB87_RS00795 PF00860 Permease family DMB87_RS00800 PF00999 Sodium/hydrogen exchanger family DMB87_RS00815 PF07885 Ion channel DMB87_RS00815 PF17655 Inward rectifier potassium channel C-terminal domain DMB87_RS00830 PF00294 pfkB family carbohydrate kinase DMB87_RS00840 PF00356 Bacterial regulatory proteins, lacI family DMB87_RS00850 PF13593 SBF-like CPA transporter family (DUF4137) DMB87_RS00865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS00865 PF03466 LysR substrate binding domain DMB87_RS00875 PF00561 alpha/beta hydrolase fold DMB87_RS00880 PF01037 Lrp/AsnC ligand binding domain DMB87_RS00890 PF04286 Protein of unknown function (DUF445) DMB87_RS00915 PF00682 HMGL-like DMB87_RS00920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMB87_RS00930 PF00871 Acetokinase family DMB87_RS00935 PF01515 Phosphate acetyl/butaryl transferase DMB87_RS00970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DMB87_RS00975 PF00106 short chain dehydrogenase DMB87_RS00980 PF13462 Thioredoxin DMB87_RS00990 PF00750 tRNA synthetases class I (R) DMB87_RS00990 PF05746 DALR anticodon binding domain DMB87_RS00990 PF03485 Arginyl tRNA synthetase N terminal domain DMB87_RS01005 PF02965 Vitamin B12 dependent methionine synthase, activation domain DMB87_RS01005 PF02574 Homocysteine S-methyltransferase DMB87_RS01005 PF00809 Pterin binding enzyme DMB87_RS01005 PF02607 B12 binding domain DMB87_RS01005 PF02310 B12 binding domain DMB87_RS01010 PF02310 B12 binding domain DMB87_RS01010 PF00809 Pterin binding enzyme DMB87_RS01010 PF02574 Homocysteine S-methyltransferase DMB87_RS01010 PF02965 Vitamin B12 dependent methionine synthase, activation domain DMB87_RS01010 PF02607 B12 binding domain DMB87_RS01015 PF12091 Protein of unknown function (DUF3567) DMB87_RS01020 PF00561 alpha/beta hydrolase fold DMB87_RS01045 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS01065 PF01467 Cytidylyltransferase-like DMB87_RS01075 PF03309 Type III pantothenate kinase DMB87_RS01080 PF03099 Biotin/lipoate A/B protein ligase family DMB87_RS01080 PF02237 Biotin protein ligase C terminal domain DMB87_RS01085 PF02405 Permease MlaE DMB87_RS01090 PF00005 ABC transporter DMB87_RS01120 PF07943 Penicillin-binding protein 5, C-terminal domain DMB87_RS01120 PF00768 D-alanyl-D-alanine carboxypeptidase DMB87_RS01125 PF01063 Amino-transferase class IV DMB87_RS01130 PF04359 Protein of unknown function (DUF493) DMB87_RS01135 PF03466 LysR substrate binding domain DMB87_RS01135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS01145 PF03099 Biotin/lipoate A/B protein ligase family DMB87_RS01150 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DMB87_RS01150 PF04055 Radical SAM superfamily DMB87_RS01155 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DMB87_RS01160 PF00005 ABC transporter DMB87_RS01165 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS01170 PF00375 Sodium:dicarboxylate symporter family DMB87_RS01175 PF02743 Cache domain DMB87_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS01175 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS01180 PF00072 Response regulator receiver domain DMB87_RS01180 PF00158 Sigma-54 interaction domain DMB87_RS01180 PF02954 Bacterial regulatory protein, Fis family DMB87_RS01185 PF00578 AhpC/TSA family DMB87_RS01195 PF01078 Magnesium chelatase, subunit ChlI DMB87_RS01195 PF13335 Magnesium chelatase, subunit ChlI C-terminal DMB87_RS01200 PF04380 Membrane fusogenic activity DMB87_RS01205 PF00543 Nitrogen regulatory protein P-II DMB87_RS01210 PF00909 Ammonium Transporter Family DMB87_RS01220 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DMB87_RS01220 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DMB87_RS01230 PF00381 PTS HPr component phosphorylation site DMB87_RS01235 PF05524 PEP-utilising enzyme, N-terminal DMB87_RS01235 PF02896 PEP-utilising enzyme, TIM barrel domain DMB87_RS01235 PF00391 PEP-utilising enzyme, mobile domain DMB87_RS01240 PF00899 ThiF family DMB87_RS01245 PF13180 PDZ domain DMB87_RS01245 PF03572 Peptidase family S41 DMB87_RS01250 PF00300 Histidine phosphatase superfamily (branch 1) DMB87_RS01255 PF00581 Rhodanese-like domain DMB87_RS01260 PF00462 Glutaredoxin DMB87_RS01265 PF02556 Preprotein translocase subunit SecB DMB87_RS01270 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DMB87_RS01270 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DMB87_RS01275 PF01661 Macro domain DMB87_RS01280 PF00588 SpoU rRNA Methylase family DMB87_RS01285 PF00156 Phosphoribosyl transferase domain DMB87_RS01290 PF08241 Methyltransferase domain DMB87_RS01300 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DMB87_RS01300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DMB87_RS01305 PF00115 Cytochrome C and Quinol oxidase polypeptide I DMB87_RS01310 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DMB87_RS01320 PF00510 Cytochrome c oxidase subunit III DMB87_RS01340 PF02628 Cytochrome oxidase assembly protein DMB87_RS01345 PF01040 UbiA prenyltransferase family DMB87_RS01350 PF02630 SCO1/SenC DMB87_RS01355 PF03180 NLPA lipoprotein DMB87_RS01360 PF07702 UTRA domain DMB87_RS01360 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS01365 PF01979 Amidohydrolase family DMB87_RS01370 PF01380 SIS domain DMB87_RS01375 PF00381 PTS HPr component phosphorylation site DMB87_RS01375 PF00391 PEP-utilising enzyme, mobile domain DMB87_RS01375 PF05524 PEP-utilising enzyme, N-terminal DMB87_RS01375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DMB87_RS01375 PF02896 PEP-utilising enzyme, TIM barrel domain DMB87_RS01380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DMB87_RS01380 PF00367 phosphotransferase system, EIIB DMB87_RS01380 PF02378 Phosphotransferase system, EIIC DMB87_RS01385 PF04545 Sigma-70, region 4 DMB87_RS01385 PF00140 Sigma-70 factor, region 1.2 DMB87_RS01385 PF04542 Sigma-70 region 2 DMB87_RS01395 PF00682 HMGL-like DMB87_RS01395 PF08502 LeuA allosteric (dimerisation) domain DMB87_RS01405 PF02885 Glycosyl transferase family, helical bundle domain DMB87_RS01410 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS01415 PF02798 Glutathione S-transferase, N-terminal domain DMB87_RS01415 PF14497 Glutathione S-transferase, C-terminal domain DMB87_RS01420 PF00448 SRP54-type protein, GTPase domain DMB87_RS01420 PF02881 SRP54-type protein, helical bundle domain DMB87_RS01430 PF01467 Cytidylyltransferase-like DMB87_RS01435 PF00037 4Fe-4S binding domain DMB87_RS01440 PF00155 Aminotransferase class I and II DMB87_RS01445 PF01195 Peptidyl-tRNA hydrolase DMB87_RS01450 PF14693 Ribosomal protein TL5, C-terminal domain DMB87_RS01450 PF01386 Ribosomal L25p family DMB87_RS01455 PF14572 Phosphoribosyl synthetase-associated domain DMB87_RS01455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DMB87_RS01465 PF08544 GHMP kinases C terminal DMB87_RS01465 PF00288 GHMP kinases N terminal domain DMB87_RS01470 PF03550 Outer membrane lipoprotein LolB DMB87_RS01480 PF06827 Zinc finger found in FPG and IleRS DMB87_RS01480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DMB87_RS01480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DMB87_RS01485 PF00730 HhH-GPD superfamily base excision DNA repair protein DMB87_RS01485 PF14815 NUDIX domain DMB87_RS01485 PF00633 Helix-hairpin-helix motif DMB87_RS01485 PF10576 Iron-sulfur binding domain of endonuclease III DMB87_RS01495 PF03668 P-loop ATPase protein family DMB87_RS01500 PF07475 HPr Serine kinase C-terminal domain DMB87_RS01500 PF02603 HPr Serine kinase N terminus DMB87_RS01505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DMB87_RS01510 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DMB87_RS01515 PF00309 Sigma-54 factor, Activator interacting domain (AID) DMB87_RS01515 PF04552 Sigma-54, DNA binding domain DMB87_RS01515 PF04963 Sigma-54 factor, core binding domain DMB87_RS01520 PF00005 ABC transporter DMB87_RS01520 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMB87_RS01525 PF03968 OstA-like protein DMB87_RS01540 PF00571 CBS domain DMB87_RS01540 PF01380 SIS domain DMB87_RS01545 PF02254 TrkA-N domain DMB87_RS01545 PF02080 TrkA-C domain DMB87_RS01545 PF00999 Sodium/hydrogen exchanger family DMB87_RS01550 PF00156 Phosphoribosyl transferase domain DMB87_RS01555 PF01810 LysE type translocator DMB87_RS01565 PF00551 Formyl transferase DMB87_RS01570 PF07690 Major Facilitator Superfamily DMB87_RS01575 PF07690 Major Facilitator Superfamily DMB87_RS01580 PF00384 Molybdopterin oxidoreductase DMB87_RS01580 PF14710 Respiratory nitrate reductase alpha N-terminal DMB87_RS01580 PF01568 Molydopterin dinucleotide binding domain DMB87_RS01585 PF14711 Respiratory nitrate reductase beta C-terminal DMB87_RS01585 PF13247 4Fe-4S dicluster domain DMB87_RS01590 PF02613 Nitrate reductase delta subunit DMB87_RS01595 PF02665 Nitrate reductase gamma subunit DMB87_RS01600 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DMB87_RS01600 PF07730 Histidine kinase DMB87_RS01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS01600 PF00672 HAMP domain DMB87_RS01605 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS01605 PF00072 Response regulator receiver domain DMB87_RS01615 PF17755 UvrA DNA-binding domain DMB87_RS01615 PF17760 UvrA interaction domain DMB87_RS01620 PF07690 Major Facilitator Superfamily DMB87_RS01625 PF00436 Single-strand binding protein family DMB87_RS01630 PF03063 Prismane/CO dehydrogenase family DMB87_RS01635 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS01635 PF00175 Oxidoreductase NAD-binding domain DMB87_RS01635 PF00970 Oxidoreductase FAD-binding domain DMB87_RS01640 PF00291 Pyridoxal-phosphate dependent enzyme DMB87_RS01645 PF03466 LysR substrate binding domain DMB87_RS01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS01655 PF00072 Response regulator receiver domain DMB87_RS01655 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS01660 PF00072 Response regulator receiver domain DMB87_RS01660 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS01665 PF00230 Major intrinsic protein DMB87_RS01670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DMB87_RS01670 PF00072 Response regulator receiver domain DMB87_RS01670 PF00672 HAMP domain DMB87_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS01670 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS01670 PF01627 Hpt domain DMB87_RS01675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS01675 PF03466 LysR substrate binding domain DMB87_RS01680 PF13609 Gram-negative porin DMB87_RS01690 PF07859 alpha/beta hydrolase fold DMB87_RS01700 PF07690 Major Facilitator Superfamily DMB87_RS01715 PF02685 Glucokinase DMB87_RS01715 PF01380 SIS domain DMB87_RS01715 PF01418 Helix-turn-helix domain, rpiR family DMB87_RS01720 PF07969 Amidohydrolase family DMB87_RS01725 PF01042 Endoribonuclease L-PSP DMB87_RS01740 PF09339 IclR helix-turn-helix domain DMB87_RS01740 PF01614 Bacterial transcriptional regulator DMB87_RS01745 PF05035 2-keto-3-deoxy-galactonokinase DMB87_RS01760 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DMB87_RS01765 PF00005 ABC transporter DMB87_RS01770 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS01780 PF08450 SMP-30/Gluconolactonase/LRE-like region DMB87_RS01790 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DMB87_RS01800 PF00994 Probable molybdopterin binding domain DMB87_RS01800 PF18146 Damage-inducible protein CinA KH domain DMB87_RS01800 PF02464 Competence-damaged protein DMB87_RS01805 PF04608 Phosphatidylglycerophosphatase A DMB87_RS01810 PF02769 AIR synthase related protein, C-terminal domain DMB87_RS01810 PF00586 AIR synthase related protein, N-terminal domain DMB87_RS01815 PF03949 Malic enzyme, NAD binding domain DMB87_RS01815 PF00390 Malic enzyme, N-terminal domain DMB87_RS01815 PF01515 Phosphate acetyl/butaryl transferase DMB87_RS01830 PF04452 RNA methyltransferase DMB87_RS01840 PF02779 Transketolase, pyrimidine binding domain DMB87_RS01840 PF00456 Transketolase, thiamine diphosphate binding domain DMB87_RS01840 PF02780 Transketolase, C-terminal domain DMB87_RS01845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DMB87_RS01845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DMB87_RS01850 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS01850 PF07729 FCD domain DMB87_RS01855 PF00375 Sodium:dicarboxylate symporter family DMB87_RS01860 PF04115 Ureidoglycolate lyase DMB87_RS01865 PF01475 Ferric uptake regulator family DMB87_RS01870 PF04355 SmpA / OmlA family DMB87_RS01875 PF01113 Dihydrodipicolinate reductase, N-terminus DMB87_RS01875 PF05173 Dihydrodipicolinate reductase, C-terminus DMB87_RS01880 PF01618 MotA/TolQ/ExbB proton channel family DMB87_RS01885 PF02472 Biopolymer transport protein ExbD/TolR DMB87_RS01890 PF09334 tRNA synthetases class I (M) DMB87_RS01890 PF08264 Anticodon-binding domain of tRNA DMB87_RS01890 PF00133 tRNA synthetases class I (I, L, M and V) DMB87_RS01890 PF13603 Leucyl-tRNA synthetase, Domain 2 DMB87_RS01905 PF00171 Aldehyde dehydrogenase family DMB87_RS01910 PF03653 Uncharacterised protein family (UPF0093) DMB87_RS01920 PF05662 Coiled stalk of trimeric autotransporter adhesin DMB87_RS01920 PF05658 Head domain of trimeric autotransporter adhesin DMB87_RS01920 PF13018 Extended Signal Peptide of Type V secretion system DMB87_RS01920 PF03895 YadA-like membrane anchor domain DMB87_RS01925 PF01380 SIS domain DMB87_RS01925 PF01418 Helix-turn-helix domain, rpiR family DMB87_RS01925 PF02685 Glucokinase DMB87_RS01930 PF00920 Dehydratase family DMB87_RS01935 PF01081 KDPG and KHG aldolase DMB87_RS01940 PF02447 GntP family permease DMB87_RS01950 PF08328 Adenylosuccinate lyase C-terminal DMB87_RS01950 PF00206 Lyase DMB87_RS01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS01960 PF03466 LysR substrate binding domain DMB87_RS01965 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DMB87_RS01965 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DMB87_RS01970 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS01975 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS01980 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS01985 PF00005 ABC transporter DMB87_RS01990 PF13230 Glutamine amidotransferases class-II DMB87_RS01995 PF01979 Amidohydrolase family DMB87_RS02015 PF00572 Ribosomal protein L13 DMB87_RS02020 PF00380 Ribosomal protein S9/S16 DMB87_RS02025 PF01521 Iron-sulphur cluster biosynthesis DMB87_RS02030 PF03702 Anhydro-N-acetylmuramic acid kinase DMB87_RS02035 PF01381 Helix-turn-helix DMB87_RS02040 PF01479 S4 domain DMB87_RS02040 PF00579 tRNA synthetases class I (W and Y) DMB87_RS02045 PF02580 D-Tyr-tRNA(Tyr) deacylase DMB87_RS02050 PF00300 Histidine phosphatase superfamily (branch 1) DMB87_RS02055 PF13458 Periplasmic binding protein DMB87_RS02065 PF05491 RuvB C-terminal winged helix domain DMB87_RS02065 PF05496 Holliday junction DNA helicase RuvB P-loop domain DMB87_RS02065 PF17864 RuvB AAA lid domain DMB87_RS02070 PF01330 RuvA N terminal domain DMB87_RS02070 PF07499 RuvA, C-terminal domain DMB87_RS02075 PF02075 Crossover junction endodeoxyribonuclease RuvC DMB87_RS02080 PF02142 MGS-like domain DMB87_RS02080 PF01808 AICARFT/IMPCHase bienzyme DMB87_RS02085 PF02954 Bacterial regulatory protein, Fis family DMB87_RS02090 PF01207 Dihydrouridine synthase (Dus) DMB87_RS02095 PF01494 FAD binding domain DMB87_RS02100 PF05195 Aminopeptidase P, N-terminal domain DMB87_RS02100 PF00557 Metallopeptidase family M24 DMB87_RS02105 PF00043 Glutathione S-transferase, C-terminal domain DMB87_RS02105 PF13417 Glutathione S-transferase, N-terminal domain DMB87_RS02110 PF01645 Conserved region in glutamate synthase DMB87_RS02120 PF00293 NUDIX domain DMB87_RS02125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DMB87_RS02125 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DMB87_RS02130 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DMB87_RS02135 PF02233 NAD(P) transhydrogenase beta subunit DMB87_RS02155 PF01170 Putative RNA methylase family UPF0020 DMB87_RS02155 PF02926 THUMP domain DMB87_RS02170 PF02470 MlaD protein DMB87_RS02175 PF04403 Paraquat-inducible protein A DMB87_RS02190 PF07549 SecD/SecF GG Motif DMB87_RS02190 PF02355 Protein export membrane protein DMB87_RS02195 PF13721 SecD export protein N-terminal TM region DMB87_RS02195 PF02355 Protein export membrane protein DMB87_RS02195 PF07549 SecD/SecF GG Motif DMB87_RS02200 PF02699 Preprotein translocase subunit DMB87_RS02205 PF01702 Queuine tRNA-ribosyltransferase DMB87_RS02210 PF02547 Queuosine biosynthesis protein DMB87_RS02215 PF00271 Helicase conserved C-terminal domain DMB87_RS02215 PF17191 RecG wedge domain DMB87_RS02215 PF00270 DEAD/DEAH box helicase DMB87_RS02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS02220 PF03466 LysR substrate binding domain DMB87_RS02225 PF06628 Catalase-related immune-responsive DMB87_RS02225 PF00199 Catalase DMB87_RS02235 PF00210 Ferritin-like domain DMB87_RS02240 PF01040 UbiA prenyltransferase family DMB87_RS02245 PF03807 NADP oxidoreductase coenzyme F420-dependent DMB87_RS02245 PF14748 Pyrroline-5-carboxylate reductase dimerisation DMB87_RS02250 PF01168 Alanine racemase, N-terminal domain DMB87_RS02255 PF02754 Cysteine-rich domain DMB87_RS02255 PF13183 4Fe-4S dicluster domain DMB87_RS02260 PF01565 FAD binding domain DMB87_RS02265 PF02913 FAD linked oxidases, C-terminal domain DMB87_RS02265 PF01565 FAD binding domain DMB87_RS02270 PF02913 FAD linked oxidases, C-terminal domain DMB87_RS02270 PF01565 FAD binding domain DMB87_RS02275 PF01923 Cobalamin adenosyltransferase DMB87_RS02280 PF00970 Oxidoreductase FAD-binding domain DMB87_RS02280 PF00175 Oxidoreductase NAD-binding domain DMB87_RS02280 PF00042 Globin DMB87_RS02285 PF00793 DAHP synthetase I family DMB87_RS02290 PF01523 Putative modulator of DNA gyrase DMB87_RS02295 PF00795 Carbon-nitrogen hydrolase DMB87_RS02305 PF08335 GlnD PII-uridylyltransferase DMB87_RS02305 PF03710 Glutamate-ammonia ligase adenylyltransferase DMB87_RS02310 PF02463 RecF/RecN/SMC N terminal domain DMB87_RS02315 PF01513 ATP-NAD kinase DMB87_RS02320 PF01628 HrcA protein C terminal domain DMB87_RS02320 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DMB87_RS02330 PF01479 S4 domain DMB87_RS02335 PF01025 GrpE DMB87_RS02340 PF00012 Hsp70 protein DMB87_RS02345 PF00226 DnaJ domain DMB87_RS02345 PF01556 DnaJ C terminal domain DMB87_RS02345 PF00684 DnaJ central domain DMB87_RS02350 PF00117 Glutamine amidotransferase class-I DMB87_RS02350 PF00425 chorismate binding enzyme DMB87_RS02350 PF04715 Anthranilate synthase component I, N terminal region DMB87_RS02355 PF02548 Ketopantoate hydroxymethyltransferase DMB87_RS02360 PF01712 Deoxynucleoside kinase DMB87_RS02365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DMB87_RS02370 PF01743 Poly A polymerase head domain DMB87_RS02370 PF12626 Polymerase A arginine-rich C-terminus DMB87_RS02370 PF12627 Probable RNA and SrmB- binding site of polymerase A DMB87_RS02385 PF00586 AIR synthase related protein, N-terminal domain DMB87_RS02385 PF02769 AIR synthase related protein, C-terminal domain DMB87_RS02390 PF03301 Tryptophan 2,3-dioxygenase DMB87_RS02395 PF00266 Aminotransferase class-V DMB87_RS02400 PF04199 Putative cyclase DMB87_RS02405 PF01037 Lrp/AsnC ligand binding domain DMB87_RS02410 PF01613 Flavin reductase like domain DMB87_RS02415 PF01625 Peptide methionine sulfoxide reductase DMB87_RS02430 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DMB87_RS02430 PF01243 Pyridoxamine 5'-phosphate oxidase DMB87_RS02435 PF00899 ThiF family DMB87_RS02440 PF00085 Thioredoxin DMB87_RS02445 PF05726 Pirin C-terminal cupin domain DMB87_RS02445 PF02678 Pirin DMB87_RS02450 PF00892 EamA-like transporter family DMB87_RS02455 PF11741 AMIN domain DMB87_RS02455 PF01520 N-acetylmuramoyl-L-alanine amidase DMB87_RS02460 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DMB87_RS02465 PF08331 Domain of unknown function (DUF1730) DMB87_RS02470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DMB87_RS02470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DMB87_RS02475 PF00589 Phage integrase family DMB87_RS02475 PF02899 Phage integrase, N-terminal SAM-like domain DMB87_RS02480 PF04073 Aminoacyl-tRNA editing domain DMB87_RS02485 PF02660 Glycerol-3-phosphate acyltransferase DMB87_RS02490 PF02203 Tar ligand binding domain homologue DMB87_RS02490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMB87_RS02490 PF00672 HAMP domain DMB87_RS02510 PF04461 Protein of unknown function (DUF520) DMB87_RS02515 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DMB87_RS02515 PF01565 FAD binding domain DMB87_RS02525 PF04209 homogentisate 1,2-dioxygenase DMB87_RS02545 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS02545 PF00072 Response regulator receiver domain DMB87_RS02555 PF03466 LysR substrate binding domain DMB87_RS02555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS02560 PF02080 TrkA-C domain DMB87_RS02560 PF06826 Predicted Permease Membrane Region DMB87_RS02565 PF06826 Predicted Permease Membrane Region DMB87_RS02565 PF02080 TrkA-C domain DMB87_RS02570 PF00155 Aminotransferase class I and II DMB87_RS02575 PF07690 Major Facilitator Superfamily DMB87_RS02580 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DMB87_RS02580 PF01799 [2Fe-2S] binding domain DMB87_RS02580 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS02580 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DMB87_RS02585 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DMB87_RS02585 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DMB87_RS02600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS02600 PF03466 LysR substrate binding domain DMB87_RS02615 PF04972 BON domain DMB87_RS02625 PF01925 Sulfite exporter TauE/SafE DMB87_RS02630 PF00892 EamA-like transporter family DMB87_RS02640 PF01925 Sulfite exporter TauE/SafE DMB87_RS02645 PF10518 TAT (twin-arginine translocation) pathway signal sequence DMB87_RS02645 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMB87_RS02645 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding DMB87_RS02655 PF04143 Sulphur transport DMB87_RS02665 PF00753 Metallo-beta-lactamase superfamily DMB87_RS02670 PF01757 Acyltransferase family DMB87_RS02675 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS02675 PF00107 Zinc-binding dehydrogenase DMB87_RS02685 PF12323 Helix-turn-helix domain DMB87_RS02685 PF01385 Probable transposase DMB87_RS02685 PF07282 Putative transposase DNA-binding domain DMB87_RS02705 PF00953 Glycosyl transferase family 4 DMB87_RS02705 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DMB87_RS02710 PF00291 Pyridoxal-phosphate dependent enzyme DMB87_RS02715 PF00535 Glycosyl transferase family 2 DMB87_RS02725 PF01943 Polysaccharide biosynthesis protein DMB87_RS02725 PF14667 Polysaccharide biosynthesis C-terminal domain DMB87_RS02760 PF00550 Phosphopantetheine attachment site DMB87_RS02765 PF08241 Methyltransferase domain DMB87_RS02770 PF01613 Flavin reductase like domain DMB87_RS02775 PF02397 Bacterial sugar transferase DMB87_RS02780 PF02563 Polysaccharide biosynthesis/export protein DMB87_RS02780 PF10531 SLBB domain DMB87_RS02785 PF02706 Chain length determinant protein DMB87_RS02785 PF13807 G-rich domain on putative tyrosine kinase DMB87_RS02785 PF13614 AAA domain DMB87_RS02790 PF00535 Glycosyl transferase family 2 DMB87_RS02795 PF13439 Glycosyltransferase Family 4 DMB87_RS02795 PF00534 Glycosyl transferases group 1 DMB87_RS02825 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DMB87_RS02830 PF03062 MBOAT, membrane-bound O-acyltransferase family DMB87_RS02855 PF01757 Acyltransferase family DMB87_RS02860 PF00916 Sulfate permease family DMB87_RS02860 PF01740 STAS domain DMB87_RS02870 PF00166 Chaperonin 10 Kd subunit DMB87_RS02875 PF00118 TCP-1/cpn60 chaperonin family DMB87_RS02890 PF00301 Rubredoxin DMB87_RS02900 PF02622 Uncharacterized ACR, COG1678 DMB87_RS02905 PF03652 Holliday junction resolvase DMB87_RS02910 PF00156 Phosphoribosyl transferase domain DMB87_RS02915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DMB87_RS02915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DMB87_RS02920 PF01979 Amidohydrolase family DMB87_RS02930 PF00149 Calcineurin-like phosphoesterase DMB87_RS02935 PF16363 GDP-mannose 4,6 dehydratase DMB87_RS02940 PF00483 Nucleotidyl transferase DMB87_RS02945 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DMB87_RS02950 PF04321 RmlD substrate binding domain DMB87_RS02960 PF00534 Glycosyl transferases group 1 DMB87_RS02960 PF13439 Glycosyltransferase Family 4 DMB87_RS02970 PF14524 Wzt C-terminal domain DMB87_RS02970 PF00005 ABC transporter DMB87_RS02980 PF13439 Glycosyltransferase Family 4 DMB87_RS02980 PF00534 Glycosyl transferases group 1 DMB87_RS02990 PF00534 Glycosyl transferases group 1 DMB87_RS02990 PF13439 Glycosyltransferase Family 4 DMB87_RS03000 PF05717 IS66 Orf2 like protein DMB87_RS03005 PF03050 Transposase IS66 family DMB87_RS03005 PF13817 IS66 C-terminal element DMB87_RS03005 PF13005 zinc-finger binding domain of transposase IS66 DMB87_RS03005 PF13007 Transposase C of IS166 homeodomain DMB87_RS03040 PF01050 Mannose-6-phosphate isomerase DMB87_RS03040 PF00483 Nucleotidyl transferase DMB87_RS03050 PF16363 GDP-mannose 4,6 dehydratase DMB87_RS03070 PF01370 NAD dependent epimerase/dehydratase family DMB87_RS03075 PF00953 Glycosyl transferase family 4 DMB87_RS03080 PF02719 Polysaccharide biosynthesis protein DMB87_RS03090 PF16363 GDP-mannose 4,6 dehydratase DMB87_RS03095 PF00534 Glycosyl transferases group 1 DMB87_RS03095 PF13439 Glycosyltransferase Family 4 DMB87_RS03105 PF04172 LrgB-like family DMB87_RS03170 PF04393 Protein of unknown function (DUF535) DMB87_RS03195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DMB87_RS03195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DMB87_RS03195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DMB87_RS03195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DMB87_RS03200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DMB87_RS03210 PF00534 Glycosyl transferases group 1 DMB87_RS03210 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DMB87_RS03215 PF02492 CobW/HypB/UreG, nucleotide-binding domain DMB87_RS03220 PF01730 UreF DMB87_RS03225 PF05194 UreE urease accessory protein, C-terminal domain DMB87_RS03225 PF02814 UreE urease accessory protein, N-terminal domain DMB87_RS03230 PF01979 Amidohydrolase family DMB87_RS03230 PF00449 Urease alpha-subunit, N-terminal domain DMB87_RS03235 PF00699 Urease beta subunit DMB87_RS03240 PF00547 Urease, gamma subunit DMB87_RS03245 PF01774 UreD urease accessory protein DMB87_RS03250 PF00581 Rhodanese-like domain DMB87_RS03260 PF04221 RelB antitoxin DMB87_RS03270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS03270 PF03466 LysR substrate binding domain DMB87_RS03275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DMB87_RS03275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DMB87_RS03285 PF01507 Phosphoadenosine phosphosulfate reductase family DMB87_RS03290 PF01507 Phosphoadenosine phosphosulfate reductase family DMB87_RS03295 PF00009 Elongation factor Tu GTP binding domain DMB87_RS03300 PF14824 Sirohaem biosynthesis protein central DMB87_RS03300 PF10414 Sirohaem synthase dimerisation region DMB87_RS03300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMB87_RS03315 PF03739 Lipopolysaccharide export system permease LptF/LptG DMB87_RS03320 PF02789 Cytosol aminopeptidase family, N-terminal domain DMB87_RS03320 PF00883 Cytosol aminopeptidase family, catalytic domain DMB87_RS03325 PF04364 DNA polymerase III chi subunit, HolC DMB87_RS03335 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DMB87_RS03340 PF00920 Dehydratase family DMB87_RS03345 PF03466 LysR substrate binding domain DMB87_RS03345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS03350 PF01790 Prolipoprotein diacylglyceryl transferase DMB87_RS03380 PF01032 FecCD transport family DMB87_RS03385 PF00005 ABC transporter DMB87_RS03390 PF02277 Phosphoribosyltransferase DMB87_RS03395 PF02654 Cobalamin-5-phosphate synthase DMB87_RS03405 PF01497 Periplasmic binding protein DMB87_RS03410 PF00155 Aminotransferase class I and II DMB87_RS03415 PF03186 CobD/Cbib protein DMB87_RS03415 PF17113 Regulatory signalling modulator protein AmpE DMB87_RS03420 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DMB87_RS03425 PF07685 CobB/CobQ-like glutamine amidotransferase domain DMB87_RS03425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DMB87_RS03445 PF02261 Aspartate decarboxylase DMB87_RS03450 PF02569 Pantoate-beta-alanine ligase DMB87_RS03455 PF02616 Segregation and condensation protein ScpA DMB87_RS03470 PF04357 TamB, inner membrane protein subunit of TAM complex DMB87_RS03475 PF01588 Putative tRNA binding domain DMB87_RS03475 PF09334 tRNA synthetases class I (M) DMB87_RS03475 PF08264 Anticodon-binding domain of tRNA DMB87_RS03480 PF00691 OmpA family DMB87_RS03480 PF05736 OprF membrane domain DMB87_RS03485 PF10609 NUBPL iron-transfer P-loop NTPase DMB87_RS03495 PF00692 dUTPase DMB87_RS03500 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DMB87_RS03500 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DMB87_RS03500 PF01276 Orn/Lys/Arg decarboxylase, major domain DMB87_RS03510 PF01062 Bestrophin, RFP-TM, chloride channel DMB87_RS03515 PF00206 Lyase DMB87_RS03515 PF14698 Argininosuccinate lyase C-terminal DMB87_RS03530 PF08241 Methyltransferase domain DMB87_RS03550 PF00311 Phosphoenolpyruvate carboxylase DMB87_RS03555 PF03900 Porphobilinogen deaminase, C-terminal domain DMB87_RS03555 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DMB87_RS03560 PF02602 Uroporphyrinogen-III synthase HemD DMB87_RS03570 PF07690 Major Facilitator Superfamily DMB87_RS03580 PF00171 Aldehyde dehydrogenase family DMB87_RS03585 PF00719 Inorganic pyrophosphatase DMB87_RS03610 PF00872 Transposase, Mutator family DMB87_RS03625 PF08448 PAS fold DMB87_RS03625 PF00563 EAL domain DMB87_RS03625 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS03630 PF01541 GIY-YIG catalytic domain DMB87_RS03640 PF00795 Carbon-nitrogen hydrolase DMB87_RS03640 PF02540 NAD synthase DMB87_RS03645 PF00543 Nitrogen regulatory protein P-II DMB87_RS03650 PF13609 Gram-negative porin DMB87_RS03655 PF00005 ABC transporter DMB87_RS03660 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS03665 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS03670 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS03680 PF00072 Response regulator receiver domain DMB87_RS03680 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS03685 PF00672 HAMP domain DMB87_RS03685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS03685 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS03695 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS03700 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS03705 PF00005 ABC transporter DMB87_RS03720 PF02954 Bacterial regulatory protein, Fis family DMB87_RS03720 PF00072 Response regulator receiver domain DMB87_RS03720 PF00158 Sigma-54 interaction domain DMB87_RS03730 PF00158 Sigma-54 interaction domain DMB87_RS03730 PF02954 Bacterial regulatory protein, Fis family DMB87_RS03730 PF00072 Response regulator receiver domain DMB87_RS03745 PF00982 Glycosyltransferase family 20 DMB87_RS03755 PF07690 Major Facilitator Superfamily DMB87_RS03760 PF01161 Phosphatidylethanolamine-binding protein DMB87_RS03765 PF03852 DNA mismatch endonuclease Vsr DMB87_RS03770 PF00145 C-5 cytosine-specific DNA methylase DMB87_RS03770 PF18284 DNA methylase N-terminal domain DMB87_RS03790 PF00301 Rubredoxin DMB87_RS03800 PF12848 ABC transporter DMB87_RS03800 PF16326 ABC transporter C-terminal domain DMB87_RS03800 PF00005 ABC transporter DMB87_RS03805 PF00986 DNA gyrase B subunit, carboxyl terminus DMB87_RS03805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS03805 PF01751 Toprim domain DMB87_RS03805 PF00204 DNA gyrase B DMB87_RS03810 PF00521 DNA gyrase/topoisomerase IV, subunit A DMB87_RS03820 PF03466 LysR substrate binding domain DMB87_RS03820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS03825 PF07690 Major Facilitator Superfamily DMB87_RS03825 PF00083 Sugar (and other) transporter DMB87_RS03830 PF07687 Peptidase dimerisation domain DMB87_RS03830 PF01546 Peptidase family M20/M25/M40 DMB87_RS03835 PF00850 Histone deacetylase domain DMB87_RS03840 PF03707 Bacterial signalling protein N terminal repeat DMB87_RS03840 PF00563 EAL domain DMB87_RS03840 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS03845 PF02567 Phenazine biosynthesis-like protein DMB87_RS03855 PF00155 Aminotransferase class I and II DMB87_RS03860 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS03860 PF00155 Aminotransferase class I and II DMB87_RS03865 PF00183 Hsp90 protein DMB87_RS03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS03870 PF04345 Chorismate lyase DMB87_RS03900 PF00474 Sodium:solute symporter family DMB87_RS03910 PF06983 3-demethylubiquinone-9 3-methyltransferase DMB87_RS03915 PF00923 Transaldolase/Fructose-6-phosphate aldolase DMB87_RS03920 PF03594 Benzoate membrane transport protein DMB87_RS03930 PF02861 Clp amino terminal domain, pathogenicity island component DMB87_RS03930 PF17871 AAA lid domain DMB87_RS03930 PF07724 AAA domain (Cdc48 subfamily) DMB87_RS03930 PF10431 C-terminal, D2-small domain, of ClpB protein DMB87_RS03930 PF00004 ATPase family associated with various cellular activities (AAA) DMB87_RS03935 PF00034 Cytochrome c DMB87_RS03940 PF00034 Cytochrome c DMB87_RS03950 PF10576 Iron-sulfur binding domain of endonuclease III DMB87_RS03950 PF00633 Helix-hairpin-helix motif DMB87_RS03950 PF00730 HhH-GPD superfamily base excision DNA repair protein DMB87_RS03955 PF04060 Putative Fe-S cluster DMB87_RS03960 PF17938 Tetracyclin repressor-like, C-terminal domain DMB87_RS03960 PF00440 Bacterial regulatory proteins, tetR family DMB87_RS03970 PF00723 Glycosyl hydrolases family 15 DMB87_RS03980 PF10282 Lactonase, 7-bladed beta-propeller DMB87_RS03985 PF01580 FtsK/SpoIIIE family DMB87_RS03985 PF09397 Ftsk gamma domain DMB87_RS03985 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DMB87_RS03985 PF17854 FtsK alpha domain DMB87_RS03985 PF09397 Ftsk gamma domain DMB87_RS03985 PF01580 FtsK/SpoIIIE family DMB87_RS03985 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DMB87_RS03985 PF17854 FtsK alpha domain DMB87_RS03995 PF01370 NAD dependent epimerase/dehydratase family DMB87_RS03995 PF02222 ATP-grasp domain DMB87_RS04005 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme DMB87_RS04010 PF00271 Helicase conserved C-terminal domain DMB87_RS04010 PF00270 DEAD/DEAH box helicase DMB87_RS04015 PF00749 tRNA synthetases class I (E and Q), catalytic domain DMB87_RS04025 PF01336 OB-fold nucleic acid binding domain DMB87_RS04025 PF02811 PHP domain DMB87_RS04025 PF14579 Helix-hairpin-helix motif DMB87_RS04025 PF07733 Bacterial DNA polymerase III alpha NTPase domain DMB87_RS04025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DMB87_RS04030 PF00535 Glycosyl transferase family 2 DMB87_RS04035 PF00664 ABC transporter transmembrane region DMB87_RS04035 PF00005 ABC transporter DMB87_RS04040 PF13439 Glycosyltransferase Family 4 DMB87_RS04040 PF00534 Glycosyl transferases group 1 DMB87_RS04050 PF00581 Rhodanese-like domain DMB87_RS04055 PF00575 S1 RNA binding domain DMB87_RS04055 PF10150 Ribonuclease E/G family DMB87_RS04060 PF02545 Maf-like protein DMB87_RS04065 PF02590 Predicted SPOUT methyltransferase DMB87_RS04075 PF01467 Cytidylyltransferase-like DMB87_RS04080 PF01218 Coproporphyrinogen III oxidase DMB87_RS04085 PF02844 Phosphoribosylglycinamide synthetase, N domain DMB87_RS04085 PF02843 Phosphoribosylglycinamide synthetase, C domain DMB87_RS04085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DMB87_RS04090 PF01709 Transcriptional regulator DMB87_RS04105 PF02142 MGS-like domain DMB87_RS04110 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS04110 PF00107 Zinc-binding dehydrogenase DMB87_RS04125 PF03814 Potassium-transporting ATPase A subunit DMB87_RS04135 PF02669 K+-transporting ATPase, c chain DMB87_RS04140 PF02702 Osmosensitive K+ channel His kinase sensor domain DMB87_RS04140 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS04140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS04140 PF13492 GAF domain DMB87_RS04140 PF13493 Domain of unknown function (DUF4118) DMB87_RS04145 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS04145 PF00072 Response regulator receiver domain DMB87_RS04150 PF00893 Small Multidrug Resistance protein DMB87_RS04175 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS04175 PF00501 AMP-binding enzyme DMB87_RS04180 PF00866 Ring hydroxylating beta subunit DMB87_RS04185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DMB87_RS04185 PF00355 Rieske [2Fe-2S] domain DMB87_RS04190 PF00175 Oxidoreductase NAD-binding domain DMB87_RS04190 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS04210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DMB87_RS04210 PF01411 tRNA synthetases class II (A) DMB87_RS04210 PF02272 DHHA1 domain DMB87_RS04225 PF03641 Possible lysine decarboxylase DMB87_RS04230 PF00440 Bacterial regulatory proteins, tetR family DMB87_RS04230 PF08359 YsiA-like protein, C-terminal region DMB87_RS04235 PF01219 Prokaryotic diacylglycerol kinase DMB87_RS04240 PF13439 Glycosyltransferase Family 4 DMB87_RS04240 PF00534 Glycosyl transferases group 1 DMB87_RS04270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMB87_RS04270 PF00205 Thiamine pyrophosphate enzyme, central domain DMB87_RS04270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMB87_RS04275 PF10369 Small subunit of acetolactate synthase DMB87_RS04280 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DMB87_RS04280 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DMB87_RS04285 PF02666 Phosphatidylserine decarboxylase DMB87_RS04290 PF01066 CDP-alcohol phosphatidyltransferase DMB87_RS04295 PF08502 LeuA allosteric (dimerisation) domain DMB87_RS04295 PF00682 HMGL-like DMB87_RS04305 PF13458 Periplasmic binding protein DMB87_RS04310 PF00312 Ribosomal protein S15 DMB87_RS04315 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DMB87_RS04315 PF00013 KH domain DMB87_RS04315 PF03725 3' exoribonuclease family, domain 2 DMB87_RS04315 PF01138 3' exoribonuclease family, domain 1 DMB87_RS04315 PF00575 S1 RNA binding domain DMB87_RS04320 PF00698 Acyl transferase domain DMB87_RS04320 PF00550 Phosphopantetheine attachment site DMB87_RS04320 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS04320 PF14765 Polyketide synthase dehydratase DMB87_RS04320 PF08659 KR domain DMB87_RS04325 PF00121 Triosephosphate isomerase DMB87_RS04330 PF03840 Preprotein translocase SecG subunit DMB87_RS04340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DMB87_RS04345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DMB87_RS04350 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DMB87_RS04355 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DMB87_RS04365 PF10531 SLBB domain DMB87_RS04365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DMB87_RS04365 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DMB87_RS04370 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DMB87_RS04370 PF00384 Molybdopterin oxidoreductase DMB87_RS04370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DMB87_RS04375 PF00146 NADH dehydrogenase DMB87_RS04380 PF12838 4Fe-4S dicluster domain DMB87_RS04385 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DMB87_RS04390 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DMB87_RS04395 PF00361 Proton-conducting membrane transporter DMB87_RS04395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DMB87_RS04400 PF00361 Proton-conducting membrane transporter DMB87_RS04400 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DMB87_RS04405 PF00361 Proton-conducting membrane transporter DMB87_RS04415 PF00293 NUDIX domain DMB87_RS04425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS04425 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS04425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS04430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS04430 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS04430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS04435 PF00171 Aldehyde dehydrogenase family DMB87_RS04435 PF01575 MaoC like domain DMB87_RS04440 PF01575 MaoC like domain DMB87_RS04445 PF00043 Glutathione S-transferase, C-terminal domain DMB87_RS04445 PF02798 Glutathione S-transferase, N-terminal domain DMB87_RS04450 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS04450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS04450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS04460 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS04465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMB87_RS04465 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DMB87_RS04465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMB87_RS04475 PF00155 Aminotransferase class I and II DMB87_RS04485 PF03883 Peroxide stress protein YaaA DMB87_RS04490 PF18027 Cytosolic carboxypeptidase N-terminal domain DMB87_RS04490 PF00246 Zinc carboxypeptidase DMB87_RS04540 PF01554 MatE DMB87_RS04550 PF01476 LysM domain DMB87_RS04550 PF01551 Peptidase family M23 DMB87_RS04565 PF02673 Bacitracin resistance protein BacA DMB87_RS04575 PF04185 Phosphoesterase family DMB87_RS04580 PF03150 Di-haem cytochrome c peroxidase DMB87_RS04595 PF00293 NUDIX domain DMB87_RS04600 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DMB87_RS04600 PF00749 tRNA synthetases class I (E and Q), catalytic domain DMB87_RS04610 PF02515 CoA-transferase family III DMB87_RS04620 PF03466 LysR substrate binding domain DMB87_RS04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS04625 PF06779 Uncharacterised MFS-type transporter YbfB DMB87_RS04630 PF09297 NADH pyrophosphatase zinc ribbon domain DMB87_RS04630 PF00293 NUDIX domain DMB87_RS04635 PF03061 Thioesterase superfamily DMB87_RS04640 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS04650 PF00005 ABC transporter DMB87_RS04650 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMB87_RS04655 PF00005 ABC transporter DMB87_RS04670 PF07690 Major Facilitator Superfamily DMB87_RS04680 PF06761 Intracellular multiplication and human macrophage-killing DMB87_RS04680 PF06744 Type VI secretion protein IcmF C-terminal DMB87_RS04680 PF14331 ImcF-related N-terminal domain DMB87_RS04685 PF04972 BON domain DMB87_RS04685 PF00691 OmpA family DMB87_RS04690 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DMB87_RS04720 PF04717 Type VI secretion system, phage-baseplate injector DMB87_RS04720 PF06715 Gp5 C-terminal repeat (3 copies) DMB87_RS04725 PF06715 Gp5 C-terminal repeat (3 copies) DMB87_RS04725 PF04717 Type VI secretion system, phage-baseplate injector DMB87_RS04735 PF05947 Type VI secretion system, TssF DMB87_RS04750 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DMB87_RS04755 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DMB87_RS04760 PF06812 ImpA, N-terminal, type VI secretion system DMB87_RS04765 PF02203 Tar ligand binding domain homologue DMB87_RS04765 PF00672 HAMP domain DMB87_RS04765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMB87_RS04770 PF04962 KduI/IolB family DMB87_RS04775 PF01261 Xylose isomerase-like TIM barrel DMB87_RS04780 PF00205 Thiamine pyrophosphate enzyme, central domain DMB87_RS04780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMB87_RS04780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMB87_RS04785 PF00294 pfkB family carbohydrate kinase DMB87_RS04790 PF00005 ABC transporter DMB87_RS04795 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS04805 PF01380 SIS domain DMB87_RS04805 PF01418 Helix-turn-helix domain, rpiR family DMB87_RS04810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DMB87_RS04810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DMB87_RS04815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DMB87_RS04815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DMB87_RS04820 PF01206 Sulfurtransferase TusA DMB87_RS04825 PF00483 Nucleotidyl transferase DMB87_RS04830 PF00133 tRNA synthetases class I (I, L, M and V) DMB87_RS04830 PF08264 Anticodon-binding domain of tRNA DMB87_RS04830 PF10458 Valyl tRNA synthetase tRNA binding arm DMB87_RS04840 PF13361 UvrD-like helicase C-terminal domain DMB87_RS04840 PF00580 UvrD/REP helicase N-terminal domain DMB87_RS04845 PF01048 Phosphorylase superfamily DMB87_RS04855 PF00501 AMP-binding enzyme DMB87_RS04855 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS04855 PF16177 Acetyl-coenzyme A synthetase N-terminus DMB87_RS04860 PF01750 Hydrogenase maturation protease DMB87_RS04865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMB87_RS04865 PF00529 HlyD membrane-fusion protein of T1SS DMB87_RS04875 PF04632 Fusaric acid resistance protein family DMB87_RS04880 PF02321 Outer membrane efflux protein DMB87_RS04885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS04885 PF03466 LysR substrate binding domain DMB87_RS04895 PF02913 FAD linked oxidases, C-terminal domain DMB87_RS04895 PF01565 FAD binding domain DMB87_RS04905 PF03358 NADPH-dependent FMN reductase DMB87_RS04910 PF03631 Virulence factor BrkB DMB87_RS04920 PF00561 alpha/beta hydrolase fold DMB87_RS04925 PF01053 Cys/Met metabolism PLP-dependent enzyme DMB87_RS04930 PF00478 IMP dehydrogenase / GMP reductase domain DMB87_RS04930 PF00571 CBS domain DMB87_RS04935 PF07690 Major Facilitator Superfamily DMB87_RS04940 PF01264 Chorismate synthase DMB87_RS04965 PF01144 Coenzyme A transferase DMB87_RS04970 PF01144 Coenzyme A transferase DMB87_RS04980 PF01042 Endoribonuclease L-PSP DMB87_RS04985 PF02824 TGS domain DMB87_RS04985 PF04607 Region found in RelA / SpoT proteins DMB87_RS04985 PF13291 ACT domain DMB87_RS04995 PF02824 TGS domain DMB87_RS04995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DMB87_RS04995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DMB87_RS04995 PF03129 Anticodon binding domain DMB87_RS05000 PF05198 Translation initiation factor IF-3, N-terminal domain DMB87_RS05000 PF00707 Translation initiation factor IF-3, C-terminal domain DMB87_RS05005 PF01632 Ribosomal protein L35 DMB87_RS05010 PF00453 Ribosomal protein L20 DMB87_RS05015 PF01409 tRNA synthetases class II core domain (F) DMB87_RS05015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DMB87_RS05020 PF01588 Putative tRNA binding domain DMB87_RS05020 PF03483 B3/4 domain DMB87_RS05020 PF03484 tRNA synthetase B5 domain DMB87_RS05020 PF03147 Ferredoxin-fold anticodon binding domain DMB87_RS05020 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DMB87_RS05025 PF00216 Bacterial DNA-binding protein DMB87_RS05055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMB87_RS05055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMB87_RS05060 PF01263 Aldose 1-epimerase DMB87_RS05070 PF18081 Fanconi anemia-associated nuclease SAP domain DMB87_RS05070 PF08774 VRR-NUC domain DMB87_RS05090 PF06804 NlpB/DapX lipoprotein DMB87_RS05095 PF02652 L-lactate permease DMB87_RS05105 PF05433 Glycine zipper 2TM domain DMB87_RS05110 PF13667 ThiC-associated domain DMB87_RS05110 PF01964 Radical SAM ThiC family DMB87_RS05130 PF07690 Major Facilitator Superfamily DMB87_RS05150 PF02798 Glutathione S-transferase, N-terminal domain DMB87_RS05160 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMB87_RS05160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMB87_RS05175 PF00083 Sugar (and other) transporter DMB87_RS05175 PF08946 Osmosensory transporter coiled coil DMB87_RS05185 PF00583 Acetyltransferase (GNAT) family DMB87_RS05185 PF00696 Amino acid kinase family DMB87_RS05190 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DMB87_RS05190 PF00270 DEAD/DEAH box helicase DMB87_RS05190 PF11898 Domain of unknown function (DUF3418) DMB87_RS05190 PF04408 Helicase associated domain (HA2) DMB87_RS05190 PF00271 Helicase conserved C-terminal domain DMB87_RS05210 PF18146 Damage-inducible protein CinA KH domain DMB87_RS05210 PF00994 Probable molybdopterin binding domain DMB87_RS05210 PF02464 Competence-damaged protein DMB87_RS05220 PF00120 Glutamine synthetase, catalytic domain DMB87_RS05220 PF03951 Glutamine synthetase, beta-Grasp domain DMB87_RS05225 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS05225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS05225 PF00989 PAS fold DMB87_RS05230 PF02954 Bacterial regulatory protein, Fis family DMB87_RS05230 PF00072 Response regulator receiver domain DMB87_RS05230 PF00158 Sigma-54 interaction domain DMB87_RS05235 PF00326 Prolyl oligopeptidase family DMB87_RS05235 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DMB87_RS05250 PF01323 DSBA-like thioredoxin domain DMB87_RS05300 PF00872 Transposase, Mutator family DMB87_RS05305 PF13332 Hemagglutinin repeat DMB87_RS05305 PF18664 CdiA C-terminal tRNase domain DMB87_RS05310 PF18664 CdiA C-terminal tRNase domain DMB87_RS05310 PF13332 Hemagglutinin repeat DMB87_RS05315 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DMB87_RS05315 PF08479 POTRA domain, ShlB-type DMB87_RS05315 PF17287 POTRA domain DMB87_RS05325 PF13332 Hemagglutinin repeat DMB87_RS05325 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain DMB87_RS05325 PF05594 Haemagluttinin repeat DMB87_RS05325 PF05860 haemagglutination activity domain DMB87_RS05325 PF13018 Extended Signal Peptide of Type V secretion system DMB87_RS05350 PF00817 impB/mucB/samB family DMB87_RS05350 PF11799 impB/mucB/samB family C-terminal domain DMB87_RS05355 PF07969 Amidohydrolase family DMB87_RS05360 PF01432 Peptidase family M3 DMB87_RS05365 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DMB87_RS05365 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DMB87_RS05370 PF00072 Response regulator receiver domain DMB87_RS05370 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS05375 PF00989 PAS fold DMB87_RS05375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS05375 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS05380 PF00456 Transketolase, thiamine diphosphate binding domain DMB87_RS05380 PF17831 Pyruvate dehydrogenase E1 component middle domain DMB87_RS05385 PF00364 Biotin-requiring enzyme DMB87_RS05385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DMB87_RS05385 PF02817 e3 binding domain DMB87_RS05390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMB87_RS05390 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMB87_RS05395 PF09361 Phasin protein DMB87_RS05400 PF00768 D-alanyl-D-alanine carboxypeptidase DMB87_RS05415 PF09339 IclR helix-turn-helix domain DMB87_RS05415 PF01614 Bacterial transcriptional regulator DMB87_RS05420 PF02754 Cysteine-rich domain DMB87_RS05425 PF11870 Domain of unknown function (DUF3390) DMB87_RS05425 PF02589 LUD domain DMB87_RS05425 PF13183 4Fe-4S dicluster domain DMB87_RS05435 PF01451 Low molecular weight phosphotyrosine protein phosphatase DMB87_RS05440 PF02082 Transcriptional regulator DMB87_RS05445 PF00266 Aminotransferase class-V DMB87_RS05450 PF01592 NifU-like N terminal domain DMB87_RS05455 PF01521 Iron-sulphur cluster biosynthesis DMB87_RS05460 PF07743 HSCB C-terminal oligomerisation domain DMB87_RS05465 PF00012 Hsp70 protein DMB87_RS05470 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS05475 PF04384 Iron-sulphur cluster assembly DMB87_RS05485 PF01336 OB-fold nucleic acid binding domain DMB87_RS05485 PF00152 tRNA synthetases class II (D, K and N) DMB87_RS05495 PF02272 DHHA1 domain DMB87_RS05495 PF17768 RecJ OB domain DMB87_RS05495 PF01368 DHH family DMB87_RS05505 PF02687 FtsX-like permease family DMB87_RS05505 PF12704 MacB-like periplasmic core domain DMB87_RS05510 PF00005 ABC transporter DMB87_RS05515 PF01026 TatD related DNase DMB87_RS05520 PF03772 Competence protein DMB87_RS05520 PF00753 Metallo-beta-lactamase superfamily DMB87_RS05530 PF06418 CTP synthase N-terminus DMB87_RS05530 PF00117 Glutamine amidotransferase class-I DMB87_RS05535 PF00793 DAHP synthetase I family DMB87_RS05540 PF00113 Enolase, C-terminal TIM barrel domain DMB87_RS05540 PF03952 Enolase, N-terminal domain DMB87_RS05545 PF04977 Septum formation initiator DMB87_RS05555 PF01430 Hsp33 protein DMB87_RS05560 PF00132 Bacterial transferase hexapeptide (six repeats) DMB87_RS05565 PF04305 Protein of unknown function (DUF455) DMB87_RS05570 PF00561 alpha/beta hydrolase fold DMB87_RS05575 PF02811 PHP domain DMB87_RS05580 PF01300 Telomere recombination DMB87_RS05585 PF02163 Peptidase family M50 DMB87_RS05590 PF00579 tRNA synthetases class I (W and Y) DMB87_RS05600 PF00701 Dihydrodipicolinate synthetase family DMB87_RS05605 PF06804 NlpB/DapX lipoprotein DMB87_RS05610 PF12706 Beta-lactamase superfamily domain DMB87_RS05615 PF01027 Inhibitor of apoptosis-promoting Bax1 DMB87_RS05620 PF00334 Nucleoside diphosphate kinase DMB87_RS05625 PF04055 Radical SAM superfamily DMB87_RS05635 PF04551 GcpE protein DMB87_RS05640 PF03129 Anticodon binding domain DMB87_RS05640 PF13393 Histidyl-tRNA synthetase DMB87_RS05650 PF13360 PQQ-like domain DMB87_RS05655 PF01926 50S ribosome-binding GTPase DMB87_RS05655 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DMB87_RS05660 PF17209 Hfq protein DMB87_RS05665 PF16360 GTP-binding GTPase Middle Region DMB87_RS05665 PF13167 GTP-binding GTPase N-terminal DMB87_RS05665 PF01926 50S ribosome-binding GTPase DMB87_RS05670 PF12221 Bacterial membrane protein N terminal DMB87_RS05670 PF01145 SPFH domain / Band 7 family DMB87_RS05675 PF01145 SPFH domain / Band 7 family DMB87_RS05680 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) DMB87_RS05685 PF13393 Histidyl-tRNA synthetase DMB87_RS05690 PF00709 Adenylosuccinate synthetase DMB87_RS05695 PF00156 Phosphoribosyl transferase domain DMB87_RS05700 PF02705 K+ potassium transporter DMB87_RS05705 PF16921 Tex protein YqgF-like domain DMB87_RS05705 PF09371 Tex-like protein N-terminal domain DMB87_RS05705 PF00575 S1 RNA binding domain DMB87_RS05705 PF17674 HHH domain DMB87_RS05720 PF13307 Helicase C-terminal domain DMB87_RS05720 PF04851 Type III restriction enzyme, res subunit DMB87_RS05735 PF08007 Cupin superfamily protein DMB87_RS05740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DMB87_RS05750 PF01624 MutS domain I DMB87_RS05750 PF05192 MutS domain III DMB87_RS05750 PF05190 MutS family domain IV DMB87_RS05750 PF00488 MutS domain V DMB87_RS05750 PF05188 MutS domain II DMB87_RS05755 PF07690 Major Facilitator Superfamily DMB87_RS05760 PF00459 Inositol monophosphatase family DMB87_RS05765 PF00588 SpoU rRNA Methylase family DMB87_RS05770 PF00132 Bacterial transferase hexapeptide (six repeats) DMB87_RS05775 PF00149 Calcineurin-like phosphoesterase DMB87_RS05780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DMB87_RS05785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DMB87_RS05795 PF01406 tRNA synthetases class I (C) catalytic domain DMB87_RS05795 PF09190 DALR domain DMB87_RS05800 PF00730 HhH-GPD superfamily base excision DNA repair protein DMB87_RS05805 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DMB87_RS05810 PF01171 PP-loop family DMB87_RS05810 PF11734 TilS substrate C-terminal domain DMB87_RS05810 PF09179 TilS substrate binding domain DMB87_RS05815 PF00696 Amino acid kinase family DMB87_RS05815 PF01842 ACT domain DMB87_RS05815 PF13840 ACT domain DMB87_RS05835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DMB87_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS05850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DMB87_RS05850 PF00005 ABC transporter DMB87_RS05855 PF00877 NlpC/P60 family DMB87_RS05860 PF01734 Patatin-like phospholipase DMB87_RS05865 PF00749 tRNA synthetases class I (E and Q), catalytic domain DMB87_RS05910 PF12833 Helix-turn-helix domain DMB87_RS05910 PF02311 AraC-like ligand binding domain DMB87_RS05920 PF01274 Malate synthase DMB87_RS05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS05930 PF03466 LysR substrate binding domain DMB87_RS05935 PF00582 Universal stress protein family DMB87_RS05940 PF00463 Isocitrate lyase family DMB87_RS05945 PF00270 DEAD/DEAH box helicase DMB87_RS05945 PF00271 Helicase conserved C-terminal domain DMB87_RS05955 PF00814 Glycoprotease family DMB87_RS05965 PF03167 Uracil DNA glycosylase superfamily DMB87_RS05975 PF08543 Phosphomethylpyrimidine kinase DMB87_RS05980 PF07690 Major Facilitator Superfamily DMB87_RS05985 PF00842 Alanine racemase, C-terminal domain DMB87_RS05985 PF01168 Alanine racemase, N-terminal domain DMB87_RS05990 PF18073 Rubredoxin metal binding domain DMB87_RS06000 PF02515 CoA-transferase family III DMB87_RS06005 PF00005 ABC transporter DMB87_RS06005 PF12848 ABC transporter DMB87_RS06010 PF00255 Glutathione peroxidase DMB87_RS06015 PF13091 PLD-like domain DMB87_RS06020 PF05175 Methyltransferase small domain DMB87_RS06025 PF01546 Peptidase family M20/M25/M40 DMB87_RS06025 PF07687 Peptidase dimerisation domain DMB87_RS06030 PF03960 ArsC family DMB87_RS06035 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DMB87_RS06035 PF14602 Hexapeptide repeat of succinyl-transferase DMB87_RS06035 PF00132 Bacterial transferase hexapeptide (six repeats) DMB87_RS06040 PF00155 Aminotransferase class I and II DMB87_RS06050 PF02463 RecF/RecN/SMC N terminal domain DMB87_RS06050 PF06470 SMC proteins Flexible Hinge Domain DMB87_RS06060 PF01653 NAD-dependent DNA ligase adenylation domain DMB87_RS06060 PF00533 BRCA1 C Terminus (BRCT) domain DMB87_RS06060 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DMB87_RS06060 PF03120 NAD-dependent DNA ligase OB-fold domain DMB87_RS06060 PF12826 Helix-hairpin-helix motif DMB87_RS06065 PF01327 Polypeptide deformylase DMB87_RS06070 PF01479 S4 domain DMB87_RS06070 PF00849 RNA pseudouridylate synthase DMB87_RS06075 PF01909 Nucleotidyltransferase domain DMB87_RS06075 PF01966 HD domain DMB87_RS06075 PF08335 GlnD PII-uridylyltransferase DMB87_RS06080 PF00557 Metallopeptidase family M24 DMB87_RS06085 PF00318 Ribosomal protein S2 DMB87_RS06090 PF00889 Elongation factor TS DMB87_RS06095 PF00696 Amino acid kinase family DMB87_RS06100 PF01765 Ribosome recycling factor DMB87_RS06105 PF01255 Putative undecaprenyl diphosphate synthase DMB87_RS06115 PF13288 DXP reductoisomerase C-terminal domain DMB87_RS06115 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DMB87_RS06115 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DMB87_RS06120 PF02163 Peptidase family M50 DMB87_RS06120 PF17820 PDZ domain DMB87_RS06125 PF07244 Surface antigen variable number repeat DMB87_RS06125 PF01103 Surface antigen DMB87_RS06135 PF00132 Bacterial transferase hexapeptide (six repeats) DMB87_RS06135 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DMB87_RS06140 PF07977 FabA-like domain DMB87_RS06145 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DMB87_RS06145 PF00132 Bacterial transferase hexapeptide (six repeats) DMB87_RS06150 PF02684 Lipid-A-disaccharide synthetase DMB87_RS06155 PF01351 Ribonuclease HII DMB87_RS06160 PF08032 RNA 2'-O ribose methyltransferase substrate binding DMB87_RS06160 PF00588 SpoU rRNA Methylase family DMB87_RS06165 PF03618 Kinase/pyrophosphorylase DMB87_RS06170 PF02896 PEP-utilising enzyme, TIM barrel domain DMB87_RS06170 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DMB87_RS06170 PF00391 PEP-utilising enzyme, mobile domain DMB87_RS06180 PF01145 SPFH domain / Band 7 family DMB87_RS06180 PF16200 C-terminal region of band_7 DMB87_RS06185 PF01668 SmpB protein DMB87_RS06190 PF03364 Polyketide cyclase / dehydrase and lipid transport DMB87_RS06195 PF03658 RnfH family Ubiquitin DMB87_RS06200 PF00892 EamA-like transporter family DMB87_RS06205 PF00571 CBS domain DMB87_RS06205 PF00478 IMP dehydrogenase / GMP reductase domain DMB87_RS06215 PF02540 NAD synthase DMB87_RS06215 PF00958 GMP synthase C terminal domain DMB87_RS06215 PF00117 Glutamine amidotransferase class-I DMB87_RS06220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMB87_RS06225 PF11855 Protein of unknown function (DUF3375) DMB87_RS06250 PF01037 Lrp/AsnC ligand binding domain DMB87_RS06255 PF00324 Amino acid permease DMB87_RS06260 PF00155 Aminotransferase class I and II DMB87_RS06270 PF09350 Domain of unknown function (DUF1992) DMB87_RS06275 PF14437 MafB19-like deaminase DMB87_RS06280 PF17676 LD-carboxypeptidase C-terminal domain DMB87_RS06280 PF02016 LD-carboxypeptidase N-terminal domain DMB87_RS06285 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS06285 PF07729 FCD domain DMB87_RS06290 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DMB87_RS06295 PF01177 Asp/Glu/Hydantoin racemase DMB87_RS06305 PF09349 OHCU decarboxylase DMB87_RS06305 PF01014 Uricase DMB87_RS06310 PF04115 Ureidoglycolate lyase DMB87_RS06315 PF05662 Coiled stalk of trimeric autotransporter adhesin DMB87_RS06315 PF13018 Extended Signal Peptide of Type V secretion system DMB87_RS06315 PF03895 YadA-like membrane anchor domain DMB87_RS06315 PF05658 Head domain of trimeric autotransporter adhesin DMB87_RS06330 PF03412 Peptidase C39 family DMB87_RS06330 PF00664 ABC transporter transmembrane region DMB87_RS06330 PF00005 ABC transporter DMB87_RS06345 PF00576 HIUase/Transthyretin family DMB87_RS06355 PF01979 Amidohydrolase family DMB87_RS06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS06360 PF03466 LysR substrate binding domain DMB87_RS06365 PF00005 ABC transporter DMB87_RS06370 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS06375 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS06380 PF02608 ABC transporter substrate-binding protein PnrA-like DMB87_RS06385 PF07311 Dodecin DMB87_RS06390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DMB87_RS06390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DMB87_RS06395 PF12848 ABC transporter DMB87_RS06395 PF00005 ABC transporter DMB87_RS06405 PF00171 Aldehyde dehydrogenase family DMB87_RS06410 PF03060 Nitronate monooxygenase DMB87_RS06415 PF03922 OmpW family DMB87_RS06425 PF13416 Bacterial extracellular solute-binding protein DMB87_RS06430 PF08402 TOBE domain DMB87_RS06430 PF00005 ABC transporter DMB87_RS06435 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS06440 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS06450 PF00743 Flavin-binding monooxygenase-like DMB87_RS06470 PF17092 Penicillin-binding protein OB-like domain DMB87_RS06470 PF00912 Transglycosylase DMB87_RS06470 PF00905 Penicillin binding protein transpeptidase domain DMB87_RS06480 PF02321 Outer membrane efflux protein DMB87_RS06485 PF00873 AcrB/AcrD/AcrF family DMB87_RS06490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMB87_RS06490 PF00529 HlyD membrane-fusion protein of T1SS DMB87_RS06495 PF00440 Bacterial regulatory proteins, tetR family DMB87_RS06495 PF08361 MAATS-type transcriptional repressor, C-terminal region DMB87_RS06510 PF00654 Voltage gated chloride channel DMB87_RS06520 PF03601 Conserved hypothetical protein 698 DMB87_RS06525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS06525 PF03466 LysR substrate binding domain DMB87_RS06535 PF00294 pfkB family carbohydrate kinase DMB87_RS06540 PF07690 Major Facilitator Superfamily DMB87_RS06545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DMB87_RS06545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMB87_RS06550 PF00356 Bacterial regulatory proteins, lacI family DMB87_RS06595 PF01544 CorA-like Mg2+ transporter protein DMB87_RS06600 PF13407 Periplasmic binding protein domain DMB87_RS06605 PF00005 ABC transporter DMB87_RS06610 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS06615 PF00356 Bacterial regulatory proteins, lacI family DMB87_RS06620 PF00294 pfkB family carbohydrate kinase DMB87_RS06625 PF02203 Tar ligand binding domain homologue DMB87_RS06625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMB87_RS06625 PF00672 HAMP domain DMB87_RS06630 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS06640 PF06798 PrkA serine protein kinase C-terminal domain DMB87_RS06640 PF08298 PrkA AAA domain DMB87_RS06645 PF04285 Protein of unknown function (DUF444) DMB87_RS06650 PF04293 SpoVR like protein DMB87_RS06660 PF00232 Glycosyl hydrolase family 1 DMB87_RS06665 PF01547 Bacterial extracellular solute-binding protein DMB87_RS06670 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS06675 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS06680 PF00005 ABC transporter DMB87_RS06680 PF08402 TOBE domain DMB87_RS06685 PF00356 Bacterial regulatory proteins, lacI family DMB87_RS06690 PF03150 Di-haem cytochrome c peroxidase DMB87_RS06690 PF14376 Haem-binding domain DMB87_RS06690 PF00034 Cytochrome c DMB87_RS06700 PF01475 Ferric uptake regulator family DMB87_RS06715 PF08521 Two-component sensor kinase N-terminal DMB87_RS06715 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS06715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS06720 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS06720 PF00072 Response regulator receiver domain DMB87_RS06740 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DMB87_RS06745 PF00171 Aldehyde dehydrogenase family DMB87_RS06760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS06760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS06760 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS06765 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS06765 PF00501 AMP-binding enzyme DMB87_RS06775 PF13609 Gram-negative porin DMB87_RS06790 PF00501 AMP-binding enzyme DMB87_RS06795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS06795 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS06795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS06800 PF00108 Thiolase, N-terminal domain DMB87_RS06800 PF02803 Thiolase, C-terminal domain DMB87_RS06805 PF13452 N-terminal half of MaoC dehydratase DMB87_RS06830 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DMB87_RS06835 PF00710 Asparaginase, N-terminal DMB87_RS06835 PF17763 Glutaminase/Asparaginase C-terminal domain DMB87_RS06840 PF13419 Haloacid dehalogenase-like hydrolase DMB87_RS06845 PF00266 Aminotransferase class-V DMB87_RS06850 PF03466 LysR substrate binding domain DMB87_RS06850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS06860 PF01738 Dienelactone hydrolase family DMB87_RS06860 PF00156 Phosphoribosyl transferase domain DMB87_RS06885 PF13439 Glycosyltransferase Family 4 DMB87_RS06890 PF13476 AAA domain DMB87_RS06895 PF00982 Glycosyltransferase family 20 DMB87_RS06910 PF01026 TatD related DNase DMB87_RS06915 PF00583 Acetyltransferase (GNAT) family DMB87_RS06920 PF09115 DNA polymerase III, delta subunit, C terminal DMB87_RS06925 PF02223 Thymidylate kinase DMB87_RS06930 PF02618 YceG-like family DMB87_RS06935 PF01571 Aminomethyltransferase folate-binding domain DMB87_RS06945 PF07859 alpha/beta hydrolase fold DMB87_RS06950 PF00106 short chain dehydrogenase DMB87_RS06955 PF00107 Zinc-binding dehydrogenase DMB87_RS06955 PF16884 N-terminal domain of oxidoreductase DMB87_RS06970 PF00108 Thiolase, N-terminal domain DMB87_RS06970 PF02803 Thiolase, C-terminal domain DMB87_RS06975 PF00857 Isochorismatase family DMB87_RS06980 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS06980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMB87_RS06980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMB87_RS06985 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS06985 PF00501 AMP-binding enzyme DMB87_RS06990 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DMB87_RS06995 PF01641 SelR domain DMB87_RS07000 PF04279 Intracellular septation protein A DMB87_RS07015 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DMB87_RS07015 PF02769 AIR synthase related protein, C-terminal domain DMB87_RS07015 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DMB87_RS07020 PF01266 FAD dependent oxidoreductase DMB87_RS07025 PF03853 YjeF-related protein N-terminus DMB87_RS07025 PF01256 Carbohydrate kinase DMB87_RS07030 PF00342 Phosphoglucose isomerase DMB87_RS07035 PF00005 ABC transporter DMB87_RS07040 PF13472 GDSL-like Lipase/Acylhydrolase family DMB87_RS07065 PF00004 ATPase family associated with various cellular activities (AAA) DMB87_RS07065 PF05362 Lon protease (S16) C-terminal proteolytic domain DMB87_RS07065 PF02190 ATP-dependent protease La (LON) substrate-binding domain DMB87_RS07070 PF07724 AAA domain (Cdc48 subfamily) DMB87_RS07070 PF10431 C-terminal, D2-small domain, of ClpB protein DMB87_RS07070 PF06689 ClpX C4-type zinc finger DMB87_RS07075 PF00574 Clp protease DMB87_RS07080 PF05697 Bacterial trigger factor protein (TF) DMB87_RS07080 PF05698 Bacterial trigger factor protein (TF) C-terminus DMB87_RS07080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DMB87_RS07085 PF02595 Glycerate kinase family DMB87_RS07090 PF01047 MarR family DMB87_RS07120 PF00072 Response regulator receiver domain DMB87_RS07120 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS07125 PF00672 HAMP domain DMB87_RS07125 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS07130 PF00578 AhpC/TSA family DMB87_RS07135 PF01757 Acyltransferase family DMB87_RS07140 PF02542 YgbB family DMB87_RS07145 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DMB87_RS07150 PF02559 CarD-like/TRCF domain DMB87_RS07150 PF00270 DEAD/DEAH box helicase DMB87_RS07150 PF00271 Helicase conserved C-terminal domain DMB87_RS07150 PF03461 TRCF domain DMB87_RS07150 PF17757 UvrB interaction domain DMB87_RS07155 PF07687 Peptidase dimerisation domain DMB87_RS07155 PF01546 Peptidase family M20/M25/M40 DMB87_RS07160 PF00291 Pyridoxal-phosphate dependent enzyme DMB87_RS07165 PF01741 Large-conductance mechanosensitive channel, MscL DMB87_RS07170 PF00072 Response regulator receiver domain DMB87_RS07170 PF01627 Hpt domain DMB87_RS07170 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS07170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS07170 PF00672 HAMP domain DMB87_RS07170 PF17149 Periplasmic sensor domain found in signal transduction proteins DMB87_RS07175 PF00072 Response regulator receiver domain DMB87_RS07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS07180 PF01590 GAF domain DMB87_RS07180 PF00360 Phytochrome region DMB87_RS07180 PF08446 PAS fold DMB87_RS07180 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS07190 PF05170 AsmA family DMB87_RS07195 PF00005 ABC transporter DMB87_RS07200 PF03649 Uncharacterised protein family (UPF0014) DMB87_RS07210 PF13298 DNA polymerase Ligase (LigD) DMB87_RS07210 PF01068 ATP dependent DNA ligase domain DMB87_RS07210 PF04679 ATP dependent DNA ligase C terminal region DMB87_RS07220 PF01053 Cys/Met metabolism PLP-dependent enzyme DMB87_RS07230 PF00294 pfkB family carbohydrate kinase DMB87_RS07235 PF00919 Uncharacterized protein family UPF0004 DMB87_RS07235 PF18693 TRAM domain DMB87_RS07235 PF04055 Radical SAM superfamily DMB87_RS07245 PF05233 PHB accumulation regulatory domain DMB87_RS07245 PF07879 PHB/PHA accumulation regulator DNA-binding domain DMB87_RS07250 PF00106 short chain dehydrogenase DMB87_RS07255 PF02803 Thiolase, C-terminal domain DMB87_RS07255 PF00108 Thiolase, N-terminal domain DMB87_RS07260 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DMB87_RS07265 PF02578 Multi-copper polyphenol oxidoreductase laccase DMB87_RS07270 PF00849 RNA pseudouridylate synthase DMB87_RS07270 PF01479 S4 domain DMB87_RS07275 PF13525 Outer membrane lipoprotein DMB87_RS07280 PF05958 tRNA (Uracil-5-)-methyltransferase DMB87_RS07305 PF04545 Sigma-70, region 4 DMB87_RS07305 PF04542 Sigma-70 region 2 DMB87_RS07305 PF04539 Sigma-70 region 3 DMB87_RS07305 PF00140 Sigma-70 factor, region 1.2 DMB87_RS07310 PF01551 Peptidase family M23 DMB87_RS07310 PF01476 LysM domain DMB87_RS07320 PF01975 Survival protein SurE DMB87_RS07325 PF00550 Phosphopantetheine attachment site DMB87_RS07325 PF08659 KR domain DMB87_RS07325 PF14765 Polyketide synthase dehydratase DMB87_RS07325 PF02801 Beta-ketoacyl synthase, C-terminal domain DMB87_RS07325 PF00698 Acyl transferase domain DMB87_RS07325 PF00109 Beta-ketoacyl synthase, N-terminal domain DMB87_RS07325 PF16197 Ketoacyl-synthetase C-terminal extension DMB87_RS07325 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS07330 PF02515 CoA-transferase family III DMB87_RS07335 PF02132 RecR protein DMB87_RS07335 PF13662 Toprim domain DMB87_RS07340 PF02575 YbaB/EbfC DNA-binding family DMB87_RS07345 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DMB87_RS07345 PF12170 DNA polymerase III tau subunit V interacting with alpha DMB87_RS07345 PF12169 DNA polymerase III subunits gamma and tau domain III DMB87_RS07355 PF00085 Thioredoxin DMB87_RS07360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMB87_RS07360 PF07498 Rho termination factor, N-terminal domain DMB87_RS07360 PF07497 Rho termination factor, RNA-binding domain DMB87_RS07365 PF13411 MerR HTH family regulatory protein DMB87_RS07380 PF01197 Ribosomal protein L31 DMB87_RS07390 PF01554 MatE DMB87_RS07395 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DMB87_RS07395 PF04055 Radical SAM superfamily DMB87_RS07400 PF00561 alpha/beta hydrolase fold DMB87_RS07400 PF00364 Biotin-requiring enzyme DMB87_RS07405 PF02780 Transketolase, C-terminal domain DMB87_RS07405 PF02779 Transketolase, pyrimidine binding domain DMB87_RS07410 PF00676 Dehydrogenase E1 component DMB87_RS07415 PF01513 ATP-NAD kinase DMB87_RS07420 PF01590 GAF domain DMB87_RS07420 PF00158 Sigma-54 interaction domain DMB87_RS07420 PF02954 Bacterial regulatory protein, Fis family DMB87_RS07430 PF06078 Bacterial protein of unknown function (DUF937) DMB87_RS07435 PF10431 C-terminal, D2-small domain, of ClpB protein DMB87_RS07435 PF07724 AAA domain (Cdc48 subfamily) DMB87_RS07435 PF17871 AAA lid domain DMB87_RS07435 PF02861 Clp amino terminal domain, pathogenicity island component DMB87_RS07435 PF00004 ATPase family associated with various cellular activities (AAA) DMB87_RS07440 PF02082 Transcriptional regulator DMB87_RS07445 PF01152 Bacterial-like globin DMB87_RS07450 PF07804 HipA-like C-terminal domain DMB87_RS07450 PF13657 HipA N-terminal domain DMB87_RS07460 PF02391 MoaE protein DMB87_RS07465 PF02597 ThiS family DMB87_RS07470 PF03453 MoeA N-terminal region (domain I and II) DMB87_RS07470 PF00994 Probable molybdopterin binding domain DMB87_RS07470 PF03454 MoeA C-terminal region (domain IV) DMB87_RS07475 PF00291 Pyridoxal-phosphate dependent enzyme DMB87_RS07475 PF14821 Threonine synthase N terminus DMB87_RS07480 PF01842 ACT domain DMB87_RS07480 PF00742 Homoserine dehydrogenase DMB87_RS07480 PF03447 Homoserine dehydrogenase, NAD binding domain DMB87_RS07485 PF00155 Aminotransferase class I and II DMB87_RS07495 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DMB87_RS07500 PF00892 EamA-like transporter family DMB87_RS07505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DMB87_RS07515 PF00551 Formyl transferase DMB87_RS07515 PF01370 NAD dependent epimerase/dehydratase family DMB87_RS07515 PF02911 Formyl transferase, C-terminal domain DMB87_RS07520 PF01370 NAD dependent epimerase/dehydratase family DMB87_RS07520 PF02911 Formyl transferase, C-terminal domain DMB87_RS07520 PF00551 Formyl transferase DMB87_RS07525 PF01522 Polysaccharide deacetylase DMB87_RS07530 PF00578 AhpC/TSA family DMB87_RS07535 PF13638 PIN domain DMB87_RS07535 PF02562 PhoH-like protein DMB87_RS07540 PF00877 NlpC/P60 family DMB87_RS07550 PF01384 Phosphate transporter family DMB87_RS07560 PF03796 DnaB-like helicase C terminal domain DMB87_RS07560 PF00772 DnaB-like helicase N terminal domain DMB87_RS07565 PF03948 Ribosomal protein L9, C-terminal domain DMB87_RS07565 PF01281 Ribosomal protein L9, N-terminal domain DMB87_RS07570 PF01084 Ribosomal protein S18 DMB87_RS07580 PF01250 Ribosomal protein S6 DMB87_RS07590 PF08281 Sigma-70, region 4 DMB87_RS07590 PF04542 Sigma-70 region 2 DMB87_RS07595 PF03466 LysR substrate binding domain DMB87_RS07595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS07600 PF00205 Thiamine pyrophosphate enzyme, central domain DMB87_RS07600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMB87_RS07600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMB87_RS07605 PF01261 Xylose isomerase-like TIM barrel DMB87_RS07610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DMB87_RS07610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DMB87_RS07615 PF04972 BON domain DMB87_RS07615 PF01476 LysM domain DMB87_RS07620 PF00710 Asparaginase, N-terminal DMB87_RS07620 PF17763 Glutaminase/Asparaginase C-terminal domain DMB87_RS07625 PF03466 LysR substrate binding domain DMB87_RS07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS07630 PF00005 ABC transporter DMB87_RS07630 PF12857 TOBE-like domain DMB87_RS07635 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS07640 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS07650 PF01726 LexA DNA binding domain DMB87_RS07650 PF00717 Peptidase S24-like DMB87_RS07665 PF00005 ABC transporter DMB87_RS07670 PF01061 ABC-2 type transporter DMB87_RS07680 PF03773 Predicted permease DMB87_RS07685 PF00248 Aldo/keto reductase family DMB87_RS07695 PF01207 Dihydrouridine synthase (Dus) DMB87_RS07715 PF03459 TOBE domain DMB87_RS07720 PF00005 ABC transporter DMB87_RS07725 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS07730 PF00296 Luciferase-like monooxygenase DMB87_RS07760 PF00893 Small Multidrug Resistance protein DMB87_RS07765 PF03928 Haem-degrading DMB87_RS07780 PF00293 NUDIX domain DMB87_RS07780 PF09297 NADH pyrophosphatase zinc ribbon domain DMB87_RS07785 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DMB87_RS07790 PF04377 Arginine-tRNA-protein transferase, C terminus DMB87_RS07790 PF04376 Arginine-tRNA-protein transferase, N terminus DMB87_RS07795 PF01180 Dihydroorotate dehydrogenase DMB87_RS07800 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS07805 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS07810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DMB87_RS07810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DMB87_RS07815 PF07729 FCD domain DMB87_RS07815 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS07820 PF00483 Nucleotidyl transferase DMB87_RS07820 PF01050 Mannose-6-phosphate isomerase DMB87_RS07830 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DMB87_RS07830 PF04198 Putative sugar-binding domain DMB87_RS07835 PF01510 N-acetylmuramoyl-L-alanine amidase DMB87_RS07840 PF00588 SpoU rRNA Methylase family DMB87_RS07840 PF08032 RNA 2'-O ribose methyltransferase substrate binding DMB87_RS07845 PF17876 Cold shock domain DMB87_RS07845 PF08461 Ribonuclease R winged-helix domain DMB87_RS07845 PF08206 Ribonuclease B OB domain DMB87_RS07845 PF00773 RNB domain DMB87_RS07845 PF00575 S1 RNA binding domain DMB87_RS07870 PF07690 Major Facilitator Superfamily DMB87_RS07875 PF02233 NAD(P) transhydrogenase beta subunit DMB87_RS07880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DMB87_RS07880 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DMB87_RS07880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DMB87_RS07890 PF05231 MASE1 DMB87_RS07890 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS07890 PF08448 PAS fold DMB87_RS07890 PF08447 PAS fold DMB87_RS07890 PF00563 EAL domain DMB87_RS07890 PF13426 PAS domain DMB87_RS07895 PF02515 CoA-transferase family III DMB87_RS07900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMB87_RS07900 PF00205 Thiamine pyrophosphate enzyme, central domain DMB87_RS07900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMB87_RS07905 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS07905 PF07729 FCD domain DMB87_RS07915 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS07915 PF00501 AMP-binding enzyme DMB87_RS07930 PF07690 Major Facilitator Superfamily DMB87_RS07935 PF00501 AMP-binding enzyme DMB87_RS07935 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS07945 PF02913 FAD linked oxidases, C-terminal domain DMB87_RS07945 PF01565 FAD binding domain DMB87_RS07955 PF04542 Sigma-70 region 2 DMB87_RS07955 PF04545 Sigma-70, region 4 DMB87_RS07960 PF17209 Hfq protein DMB87_RS07995 PF03969 AFG1-like ATPase DMB87_RS08000 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMB87_RS08000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DMB87_RS08005 PF00364 Biotin-requiring enzyme DMB87_RS08005 PF02817 e3 binding domain DMB87_RS08005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DMB87_RS08010 PF02779 Transketolase, pyrimidine binding domain DMB87_RS08010 PF16078 2-oxoglutarate dehydrogenase N-terminus DMB87_RS08010 PF00676 Dehydrogenase E1 component DMB87_RS08010 PF16870 2-oxoglutarate dehydrogenase C-terminal DMB87_RS08015 PF00679 Elongation factor G C-terminus DMB87_RS08015 PF00009 Elongation factor Tu GTP binding domain DMB87_RS08015 PF03144 Elongation factor Tu domain 2 DMB87_RS08020 PF01047 MarR family DMB87_RS08025 PF02321 Outer membrane efflux protein DMB87_RS08030 PF00529 HlyD membrane-fusion protein of T1SS DMB87_RS08030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMB87_RS08035 PF07690 Major Facilitator Superfamily DMB87_RS08040 PF09157 Pseudouridine synthase II TruB, C-terminal DMB87_RS08040 PF16198 tRNA pseudouridylate synthase B C-terminal domain DMB87_RS08040 PF01509 TruB family pseudouridylate synthase (N terminal domain) DMB87_RS08045 PF02033 Ribosome-binding factor A DMB87_RS08050 PF00009 Elongation factor Tu GTP binding domain DMB87_RS08050 PF11987 Translation-initiation factor 2 DMB87_RS08050 PF08364 Bacterial translation initiation factor IF-2 associated region DMB87_RS08050 PF04760 Translation initiation factor IF-2, N-terminal region DMB87_RS08055 PF08529 NusA N-terminal domain DMB87_RS08055 PF13184 NusA-like KH domain DMB87_RS08060 PF02576 RimP N-terminal domain DMB87_RS08060 PF17384 RimP C-terminal SH3 domain DMB87_RS08065 PF01479 S4 domain DMB87_RS08065 PF00849 RNA pseudouridylate synthase DMB87_RS08070 PF04079 Segregation and condensation complex subunit ScpB DMB87_RS08075 PF00155 Aminotransferase class I and II DMB87_RS08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS08080 PF03466 LysR substrate binding domain DMB87_RS08100 PF02698 DUF218 domain DMB87_RS08115 PF00563 EAL domain DMB87_RS08115 PF05231 MASE1 DMB87_RS08120 PF00472 RF-1 domain DMB87_RS08140 PF13404 AsnC-type helix-turn-helix domain DMB87_RS08140 PF01037 Lrp/AsnC ligand binding domain DMB87_RS08150 PF00924 Mechanosensitive ion channel DMB87_RS08155 PF13460 NAD(P)H-binding DMB87_RS08160 PF02082 Transcriptional regulator DMB87_RS08170 PF13673 Acetyltransferase (GNAT) domain DMB87_RS08185 PF01590 GAF domain DMB87_RS08185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS08185 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS08185 PF08446 PAS fold DMB87_RS08185 PF00360 Phytochrome region DMB87_RS08190 PF00909 Ammonium Transporter Family DMB87_RS08195 PF06722 Protein of unknown function (DUF1205) DMB87_RS08205 PF03918 Cytochrome C biogenesis protein DMB87_RS08210 PF08534 Redoxin DMB87_RS08215 PF01578 Cytochrome C assembly protein DMB87_RS08215 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DMB87_RS08220 PF03100 CcmE DMB87_RS08225 PF01578 Cytochrome C assembly protein DMB87_RS08230 PF03379 CcmB protein DMB87_RS08235 PF00005 ABC transporter DMB87_RS08240 PF03264 NapC/NirT cytochrome c family, N-terminal region DMB87_RS08245 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DMB87_RS08250 PF00384 Molybdopterin oxidoreductase DMB87_RS08250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMB87_RS08250 PF01568 Molydopterin dinucleotide binding domain DMB87_RS08265 PF13533 Biotin-lipoyl like DMB87_RS08270 PF00873 AcrB/AcrD/AcrF family DMB87_RS08275 PF00873 AcrB/AcrD/AcrF family DMB87_RS08290 PF00578 AhpC/TSA family DMB87_RS08295 PF03707 Bacterial signalling protein N terminal repeat DMB87_RS08295 PF00563 EAL domain DMB87_RS08295 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS08305 PF00563 EAL domain DMB87_RS08305 PF08668 HDOD domain DMB87_RS08310 PF00145 C-5 cytosine-specific DNA methylase DMB87_RS08310 PF01381 Helix-turn-helix DMB87_RS08325 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS08330 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DMB87_RS08335 PF04996 Succinylarginine dihydrolase DMB87_RS08340 PF00171 Aldehyde dehydrogenase family DMB87_RS08345 PF04958 Arginine N-succinyltransferase beta subunit DMB87_RS08350 PF04958 Arginine N-succinyltransferase beta subunit DMB87_RS08355 PF00202 Aminotransferase class-III DMB87_RS08360 PF12833 Helix-turn-helix domain DMB87_RS08365 PF00005 ABC transporter DMB87_RS08370 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS08375 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS08380 PF01734 Patatin-like phospholipase DMB87_RS08395 PF04794 YdjC-like protein DMB87_RS08400 PF00919 Uncharacterized protein family UPF0004 DMB87_RS08400 PF04055 Radical SAM superfamily DMB87_RS08400 PF18693 TRAM domain DMB87_RS08410 PF00296 Luciferase-like monooxygenase DMB87_RS08415 PF00561 alpha/beta hydrolase fold DMB87_RS08420 PF00483 Nucleotidyl transferase DMB87_RS08425 PF08323 Starch synthase catalytic domain DMB87_RS08425 PF00534 Glycosyl transferases group 1 DMB87_RS08430 PF08543 Phosphomethylpyrimidine kinase DMB87_RS08440 PF13458 Periplasmic binding protein DMB87_RS08455 PF12897 Alanine-glyoxylate amino-transferase DMB87_RS08460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS08460 PF03466 LysR substrate binding domain DMB87_RS08470 PF07702 UTRA domain DMB87_RS08470 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS08475 PF00221 Aromatic amino acid lyase DMB87_RS08480 PF03466 LysR substrate binding domain DMB87_RS08480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS08510 PF00860 Permease family DMB87_RS08520 PF07690 Major Facilitator Superfamily DMB87_RS08530 PF03466 LysR substrate binding domain DMB87_RS08530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS08535 PF01810 LysE type translocator DMB87_RS08550 PF13632 Glycosyl transferase family group 2 DMB87_RS08550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DMB87_RS08560 PF02350 UDP-N-acetylglucosamine 2-epimerase DMB87_RS08590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS08590 PF03466 LysR substrate binding domain DMB87_RS08595 PF00067 Cytochrome P450 DMB87_RS08625 PF00999 Sodium/hydrogen exchanger family DMB87_RS08635 PF02589 LUD domain DMB87_RS08635 PF11870 Domain of unknown function (DUF3390) DMB87_RS08635 PF13183 4Fe-4S dicluster domain DMB87_RS08640 PF02754 Cysteine-rich domain DMB87_RS08645 PF13609 Gram-negative porin DMB87_RS08660 PF02728 Copper amine oxidase, N3 domain DMB87_RS08660 PF01179 Copper amine oxidase, enzyme domain DMB87_RS08670 PF00171 Aldehyde dehydrogenase family DMB87_RS08675 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DMB87_RS08685 PF01230 HIT domain DMB87_RS08760 PF01451 Low molecular weight phosphotyrosine protein phosphatase DMB87_RS08765 PF01758 Sodium Bile acid symporter family DMB87_RS08770 PF03960 ArsC family DMB87_RS08775 PF03358 NADPH-dependent FMN reductase DMB87_RS08785 PF00583 Acetyltransferase (GNAT) family DMB87_RS08805 PF00474 Sodium:solute symporter family DMB87_RS08815 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS08815 PF00501 AMP-binding enzyme DMB87_RS08815 PF16177 Acetyl-coenzyme A synthetase N-terminus DMB87_RS08825 PF03350 Uncharacterized protein family, UPF0114 DMB87_RS08835 PF00210 Ferritin-like domain DMB87_RS08840 PF01177 Asp/Glu/Hydantoin racemase DMB87_RS08850 PF03544 Gram-negative bacterial TonB protein C-terminal DMB87_RS08855 PF01618 MotA/TolQ/ExbB proton channel family DMB87_RS08860 PF02472 Biopolymer transport protein ExbD/TolR DMB87_RS08865 PF03466 LysR substrate binding domain DMB87_RS08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS08870 PF02678 Pirin DMB87_RS08870 PF05726 Pirin C-terminal cupin domain DMB87_RS08885 PF10636 Hemin uptake protein hemP DMB87_RS08890 PF03928 Haem-degrading DMB87_RS08895 PF12801 4Fe-4S binding domain DMB87_RS08895 PF04205 FMN-binding domain DMB87_RS08905 PF13473 Cupredoxin-like domain DMB87_RS08910 PF10634 Fe2+ transport protein DMB87_RS08915 PF12344 Ultra-violet resistance protein B DMB87_RS08915 PF02151 UvrB/uvrC motif DMB87_RS08915 PF04851 Type III restriction enzyme, res subunit DMB87_RS08915 PF17757 UvrB interaction domain DMB87_RS08915 PF00271 Helicase conserved C-terminal domain DMB87_RS08920 PF00155 Aminotransferase class I and II DMB87_RS08935 PF00248 Aldo/keto reductase family DMB87_RS08940 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DMB87_RS08950 PF09278 MerR, DNA binding DMB87_RS08950 PF00376 MerR family regulatory protein DMB87_RS08960 PF04321 RmlD substrate binding domain DMB87_RS08965 PF02811 PHP domain DMB87_RS08965 PF14579 Helix-hairpin-helix motif DMB87_RS08965 PF07733 Bacterial DNA polymerase III alpha NTPase domain DMB87_RS08965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DMB87_RS08980 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS08980 PF00072 Response regulator receiver domain DMB87_RS09005 PF06715 Gp5 C-terminal repeat (3 copies) DMB87_RS09005 PF04717 Type VI secretion system, phage-baseplate injector DMB87_RS09015 PF13361 UvrD-like helicase C-terminal domain DMB87_RS09015 PF00580 UvrD/REP helicase N-terminal domain DMB87_RS09035 PF00872 Transposase, Mutator family DMB87_RS09045 PF00300 Histidine phosphatase superfamily (branch 1) DMB87_RS09055 PF02541 Ppx/GppA phosphatase family DMB87_RS09060 PF13090 Polyphosphate kinase C-terminal domain 2 DMB87_RS09060 PF17941 Polyphosphate kinase C-terminal domain 1 DMB87_RS09060 PF02503 Polyphosphate kinase middle domain DMB87_RS09060 PF13089 Polyphosphate kinase N-terminal domain DMB87_RS09065 PF00989 PAS fold DMB87_RS09065 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS09065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS09065 PF11808 Phosphate regulon sensor protein PhoR DMB87_RS09070 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS09070 PF00072 Response regulator receiver domain DMB87_RS09075 PF01895 PhoU domain DMB87_RS09080 PF00005 ABC transporter DMB87_RS09085 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS09090 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS09095 PF12849 PBP superfamily domain DMB87_RS09100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DMB87_RS09100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DMB87_RS09100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DMB87_RS09100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DMB87_RS09105 PF00809 Pterin binding enzyme DMB87_RS09110 PF06480 FtsH Extracellular DMB87_RS09110 PF01434 Peptidase family M41 DMB87_RS09110 PF00004 ATPase family associated with various cellular activities (AAA) DMB87_RS09110 PF17862 AAA+ lid domain DMB87_RS09115 PF01728 FtsJ-like methyltransferase DMB87_RS09120 PF01985 CRS1 / YhbY (CRM) domain DMB87_RS09130 PF01272 Transcription elongation factor, GreA/GreB, C-term DMB87_RS09130 PF03449 Transcription elongation factor, N-terminal DMB87_RS09135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMB87_RS09135 PF02142 MGS-like domain DMB87_RS09135 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DMB87_RS09140 PF00117 Glutamine amidotransferase class-I DMB87_RS09140 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DMB87_RS09145 PF01464 Transglycosylase SLT domain DMB87_RS09145 PF01476 LysM domain DMB87_RS09150 PF00753 Metallo-beta-lactamase superfamily DMB87_RS09150 PF16123 Hydroxyacylglutathione hydrolase C-terminus DMB87_RS09155 PF08241 Methyltransferase domain DMB87_RS09160 PF00075 RNase H DMB87_RS09165 PF00929 Exonuclease DMB87_RS09185 PF13439 Glycosyltransferase Family 4 DMB87_RS09185 PF00534 Glycosyl transferases group 1 DMB87_RS09190 PF00664 ABC transporter transmembrane region DMB87_RS09190 PF00005 ABC transporter DMB87_RS09195 PF00982 Glycosyltransferase family 20 DMB87_RS09200 PF02358 Trehalose-phosphatase DMB87_RS09205 PF02630 SCO1/SenC DMB87_RS09220 PF13673 Acetyltransferase (GNAT) domain DMB87_RS09245 PF01066 CDP-alcohol phosphatidyltransferase DMB87_RS09250 PF01541 GIY-YIG catalytic domain DMB87_RS09250 PF02151 UvrB/uvrC motif DMB87_RS09250 PF08459 UvrC Helix-hairpin-helix N-terminal DMB87_RS09260 PF08207 Elongation factor P (EF-P) KOW-like domain DMB87_RS09260 PF09285 Elongation factor P, C-terminal DMB87_RS09260 PF01132 Elongation factor P (EF-P) OB domain DMB87_RS09270 PF00072 Response regulator receiver domain DMB87_RS09270 PF00158 Sigma-54 interaction domain DMB87_RS09270 PF02954 Bacterial regulatory protein, Fis family DMB87_RS09275 PF00933 Glycosyl hydrolase family 3 N terminal domain DMB87_RS09280 PF01648 4'-phosphopantetheinyl transferase superfamily DMB87_RS09285 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DMB87_RS09290 PF11967 Recombination protein O N terminal DMB87_RS09290 PF02565 Recombination protein O C terminal DMB87_RS09295 PF07650 KH domain DMB87_RS09295 PF01926 50S ribosome-binding GTPase DMB87_RS09300 PF14622 Ribonuclease-III-like DMB87_RS09300 PF00035 Double-stranded RNA binding motif DMB87_RS09305 PF10502 Signal peptidase, peptidase S26 DMB87_RS09310 PF06421 GTP-binding protein LepA C-terminus DMB87_RS09310 PF00679 Elongation factor G C-terminus DMB87_RS09310 PF00009 Elongation factor Tu GTP binding domain DMB87_RS09310 PF03144 Elongation factor Tu domain 2 DMB87_RS09320 PF13180 PDZ domain DMB87_RS09335 PF08281 Sigma-70, region 4 DMB87_RS09335 PF04542 Sigma-70 region 2 DMB87_RS09345 PF00109 Beta-ketoacyl synthase, N-terminal domain DMB87_RS09345 PF02801 Beta-ketoacyl synthase, C-terminal domain DMB87_RS09350 PF00550 Phosphopantetheine attachment site DMB87_RS09360 PF00698 Acyl transferase domain DMB87_RS09365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DMB87_RS09365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DMB87_RS09370 PF02504 Fatty acid synthesis protein DMB87_RS09380 PF01783 Ribosomal L32p protein family DMB87_RS09385 PF02620 Large ribosomal RNA subunit accumulation protein YceD DMB87_RS09390 PF02545 Maf-like protein DMB87_RS09395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DMB87_RS09400 PF01343 Peptidase family S49 DMB87_RS09400 PF06965 Na+/H+ antiporter 1 DMB87_RS09410 PF13419 Haloacid dehalogenase-like hydrolase DMB87_RS09415 PF01479 S4 domain DMB87_RS09415 PF00849 RNA pseudouridylate synthase DMB87_RS09420 PF00575 S1 RNA binding domain DMB87_RS09420 PF10150 Ribonuclease E/G family DMB87_RS09420 PF12111 Polyribonucleotide phosphorylase C terminal DMB87_RS09425 PF06463 Molybdenum Cofactor Synthesis C DMB87_RS09425 PF04055 Radical SAM superfamily DMB87_RS09430 PF12804 MobA-like NTP transferase domain DMB87_RS09435 PF03453 MoeA N-terminal region (domain I and II) DMB87_RS09435 PF00994 Probable molybdopterin binding domain DMB87_RS09435 PF03454 MoeA C-terminal region (domain IV) DMB87_RS09450 PF02646 RmuC family DMB87_RS09455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMB87_RS09455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DMB87_RS09470 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DMB87_RS09470 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DMB87_RS09480 PF11953 Domain of unknown function (DUF3470) DMB87_RS09480 PF00037 4Fe-4S binding domain DMB87_RS09495 PF05981 CreA protein DMB87_RS09505 PF03591 AzlC protein DMB87_RS09520 PF00580 UvrD/REP helicase N-terminal domain DMB87_RS09520 PF13361 UvrD-like helicase C-terminal domain DMB87_RS09530 PF01554 MatE DMB87_RS09535 PF01758 Sodium Bile acid symporter family DMB87_RS09545 PF13091 PLD-like domain DMB87_RS09550 PF00206 Lyase DMB87_RS09550 PF10415 Fumarase C C-terminus DMB87_RS09555 PF03061 Thioesterase superfamily DMB87_RS09560 PF01965 DJ-1/PfpI family DMB87_RS09560 PF12833 Helix-turn-helix domain DMB87_RS09575 PF00303 Thymidylate synthase DMB87_RS09580 PF00072 Response regulator receiver domain DMB87_RS09580 PF02954 Bacterial regulatory protein, Fis family DMB87_RS09580 PF00158 Sigma-54 interaction domain DMB87_RS09620 PF00072 Response regulator receiver domain DMB87_RS09620 PF00158 Sigma-54 interaction domain DMB87_RS09620 PF02954 Bacterial regulatory protein, Fis family DMB87_RS09625 PF00186 Dihydrofolate reductase DMB87_RS09630 PF01523 Putative modulator of DNA gyrase DMB87_RS09635 PF04751 Protein of unknown function (DUF615) DMB87_RS09640 PF00994 Probable molybdopterin binding domain DMB87_RS09645 PF00929 Exonuclease DMB87_RS09650 PF01435 Peptidase family M48 DMB87_RS09655 PF03193 RsgA GTPase DMB87_RS09675 PF01245 Ribosomal protein L19 DMB87_RS09680 PF01746 tRNA (Guanine-1)-methyltransferase DMB87_RS09685 PF05239 PRC-barrel domain DMB87_RS09685 PF01782 RimM N-terminal domain DMB87_RS09690 PF00886 Ribosomal protein S16 DMB87_RS09695 PF07995 Glucose / Sorbosone dehydrogenase DMB87_RS09710 PF01037 Lrp/AsnC ligand binding domain DMB87_RS09715 PF01266 FAD dependent oxidoreductase DMB87_RS09720 PF01012 Electron transfer flavoprotein domain DMB87_RS09720 PF00766 Electron transfer flavoprotein FAD-binding domain DMB87_RS09725 PF01012 Electron transfer flavoprotein domain DMB87_RS09730 PF03180 NLPA lipoprotein DMB87_RS09735 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS09740 PF09383 NIL domain DMB87_RS09740 PF00005 ABC transporter DMB87_RS09745 PF12146 Serine aminopeptidase, S33 DMB87_RS09750 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS09755 PF00850 Histone deacetylase domain DMB87_RS09760 PF13406 Transglycosylase SLT domain DMB87_RS09765 PF00291 Pyridoxal-phosphate dependent enzyme DMB87_RS09775 PF01370 NAD dependent epimerase/dehydratase family DMB87_RS09780 PF00294 pfkB family carbohydrate kinase DMB87_RS09785 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DMB87_RS09785 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DMB87_RS09785 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DMB87_RS09790 PF18073 Rubredoxin metal binding domain DMB87_RS09800 PF00216 Bacterial DNA-binding protein DMB87_RS09805 PF00575 S1 RNA binding domain DMB87_RS09810 PF02224 Cytidylate kinase DMB87_RS09820 PF00155 Aminotransferase class I and II DMB87_RS09825 PF01817 Chorismate mutase type II DMB87_RS09825 PF01842 ACT domain DMB87_RS09825 PF00800 Prephenate dehydratase DMB87_RS09830 PF00266 Aminotransferase class-V DMB87_RS09840 PF00521 DNA gyrase/topoisomerase IV, subunit A DMB87_RS09840 PF03989 DNA gyrase C-terminal domain, beta-propeller DMB87_RS09845 PF00691 OmpA family DMB87_RS09855 PF13419 Haloacid dehalogenase-like hydrolase DMB87_RS09870 PF12728 Helix-turn-helix domain DMB87_RS09870 PF12727 PBP superfamily domain DMB87_RS09880 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DMB87_RS09880 PF00037 4Fe-4S binding domain DMB87_RS09880 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DMB87_RS09885 PF12838 4Fe-4S dicluster domain DMB87_RS09885 PF00384 Molybdopterin oxidoreductase DMB87_RS09885 PF01568 Molydopterin dinucleotide binding domain DMB87_RS09885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMB87_RS09885 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DMB87_RS09895 PF01494 FAD binding domain DMB87_RS09900 PF01545 Cation efflux family DMB87_RS09900 PF16916 Dimerisation domain of Zinc Transporter DMB87_RS09905 PF01022 Bacterial regulatory protein, arsR family DMB87_RS09930 PF07722 Peptidase C26 DMB87_RS09935 PF00999 Sodium/hydrogen exchanger family DMB87_RS09935 PF02254 TrkA-N domain DMB87_RS09940 PF01425 Amidase DMB87_RS09945 PF02600 Disulfide bond formation protein DsbB DMB87_RS09950 PF01799 [2Fe-2S] binding domain DMB87_RS09950 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS09955 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DMB87_RS09955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DMB87_RS09965 PF00962 Adenosine/AMP deaminase DMB87_RS09970 PF01979 Amidohydrolase family DMB87_RS09975 PF01169 Uncharacterized protein family UPF0016 DMB87_RS09985 PF11940 Domain of unknown function (DUF3458) Ig-like fold DMB87_RS09985 PF01433 Peptidase family M1 domain DMB87_RS09985 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DMB87_RS09990 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DMB87_RS10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS10015 PF03466 LysR substrate binding domain DMB87_RS10020 PF00248 Aldo/keto reductase family DMB87_RS10030 PF14579 Helix-hairpin-helix motif DMB87_RS10030 PF02811 PHP domain DMB87_RS10030 PF11490 DNA polymerase III polC-type N-terminus II DMB87_RS10030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DMB87_RS10030 PF14480 DNA polymerase III polC-type N-terminus I DMB87_RS10030 PF00929 Exonuclease DMB87_RS10030 PF07733 Bacterial DNA polymerase III alpha NTPase domain DMB87_RS10035 PF00313 'Cold-shock' DNA-binding domain DMB87_RS10045 PF13609 Gram-negative porin DMB87_RS10050 PF03449 Transcription elongation factor, N-terminal DMB87_RS10050 PF01272 Transcription elongation factor, GreA/GreB, C-term DMB87_RS10070 PF02824 TGS domain DMB87_RS10070 PF04607 Region found in RelA / SpoT proteins DMB87_RS10070 PF13291 ACT domain DMB87_RS10075 PF01192 RNA polymerase Rpb6 DMB87_RS10080 PF00625 Guanylate kinase DMB87_RS10085 PF03755 YicC-like family, N-terminal region DMB87_RS10085 PF08340 Domain of unknown function (DUF1732) DMB87_RS10090 PF01138 3' exoribonuclease family, domain 1 DMB87_RS10090 PF03725 3' exoribonuclease family, domain 2 DMB87_RS10095 PF01725 Ham1 family DMB87_RS10100 PF06969 HemN C-terminal domain DMB87_RS10100 PF04055 Radical SAM superfamily DMB87_RS10120 PF07690 Major Facilitator Superfamily DMB87_RS10120 PF00083 Sugar (and other) transporter DMB87_RS10130 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DMB87_RS10135 PF00654 Voltage gated chloride channel DMB87_RS10145 PF03776 Septum formation topological specificity factor MinE DMB87_RS10150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DMB87_RS10155 PF05209 Septum formation inhibitor MinC, N-terminal domain DMB87_RS10155 PF03775 Septum formation inhibitor MinC, C-terminal domain DMB87_RS10165 PF00557 Metallopeptidase family M24 DMB87_RS10240 PF02403 Seryl-tRNA synthetase N-terminal domain DMB87_RS10240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DMB87_RS10245 PF00004 ATPase family associated with various cellular activities (AAA) DMB87_RS10245 PF16193 AAA C-terminal domain DMB87_RS10245 PF12002 MgsA AAA+ ATPase C terminal DMB87_RS10255 PF04055 Radical SAM superfamily DMB87_RS10255 PF06968 Biotin and Thiamin Synthesis associated domain DMB87_RS10265 PF00155 Aminotransferase class I and II DMB87_RS10270 PF00202 Aminotransferase class-III DMB87_RS10290 PF02803 Thiolase, C-terminal domain DMB87_RS10290 PF00108 Thiolase, N-terminal domain DMB87_RS10295 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DMB87_RS10300 PF13411 MerR HTH family regulatory protein DMB87_RS10310 PF03548 Outer membrane lipoprotein carrier protein LolA DMB87_RS10315 PF09397 Ftsk gamma domain DMB87_RS10315 PF01580 FtsK/SpoIIIE family DMB87_RS10315 PF17854 FtsK alpha domain DMB87_RS10315 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DMB87_RS10320 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMB87_RS10325 PF01713 Smr domain DMB87_RS10330 PF17912 MalK OB fold domain DMB87_RS10330 PF00005 ABC transporter DMB87_RS10330 PF03459 TOBE domain DMB87_RS10335 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS10340 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS10345 PF01547 Bacterial extracellular solute-binding protein DMB87_RS10350 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DMB87_RS10350 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DMB87_RS10355 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DMB87_RS10360 PF02685 Glucokinase DMB87_RS10360 PF01418 Helix-turn-helix domain, rpiR family DMB87_RS10360 PF01380 SIS domain DMB87_RS10365 PF07690 Major Facilitator Superfamily DMB87_RS10375 PF00202 Aminotransferase class-III DMB87_RS10380 PF01872 RibD C-terminal domain DMB87_RS10380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DMB87_RS10385 PF00677 Lumazine binding domain DMB87_RS10395 PF00005 ABC transporter DMB87_RS10395 PF00664 ABC transporter transmembrane region DMB87_RS10400 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DMB87_RS10400 PF00925 GTP cyclohydrolase II DMB87_RS10405 PF00885 6,7-dimethyl-8-ribityllumazine synthase DMB87_RS10410 PF01029 NusB family DMB87_RS10415 PF00155 Aminotransferase class I and II DMB87_RS10420 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DMB87_RS10420 PF01464 Transglycosylase SLT domain DMB87_RS10425 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DMB87_RS10430 PF00171 Aldehyde dehydrogenase family DMB87_RS10445 PF02325 YGGT family DMB87_RS10455 PF02390 Putative methyltransferase DMB87_RS10460 PF02673 Bacitracin resistance protein BacA DMB87_RS10470 PF03692 Putative zinc- or iron-chelating domain DMB87_RS10475 PF04055 Radical SAM superfamily DMB87_RS10475 PF06969 HemN C-terminal domain DMB87_RS10485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMB87_RS10485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMB87_RS10485 PF00205 Thiamine pyrophosphate enzyme, central domain DMB87_RS10490 PF00849 RNA pseudouridylate synthase DMB87_RS10490 PF01479 S4 domain DMB87_RS10505 PF00970 Oxidoreductase FAD-binding domain DMB87_RS10505 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS10505 PF00175 Oxidoreductase NAD-binding domain DMB87_RS10510 PF00202 Aminotransferase class-III DMB87_RS10515 PF00583 Acetyltransferase (GNAT) family DMB87_RS10520 PF00005 ABC transporter DMB87_RS10525 PF00005 ABC transporter DMB87_RS10525 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMB87_RS10530 PF11862 Domain of unknown function (DUF3382) DMB87_RS10530 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS10535 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS10545 PF02401 LytB protein DMB87_RS10550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DMB87_RS10555 PF04002 RadC-like JAB domain DMB87_RS10560 PF00830 Ribosomal L28 family DMB87_RS10565 PF00471 Ribosomal protein L33 DMB87_RS10570 PF02910 Fumarate reductase flavoprotein C-term DMB87_RS10570 PF00890 FAD binding domain DMB87_RS10575 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DMB87_RS10575 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DMB87_RS10580 PF02445 Quinolinate synthetase A protein DMB87_RS10595 PF01029 NusB family DMB87_RS10595 PF01189 16S rRNA methyltransferase RsmB/F DMB87_RS10600 PF00551 Formyl transferase DMB87_RS10605 PF01687 Riboflavin kinase DMB87_RS10605 PF06574 FAD synthetase DMB87_RS10610 PF08264 Anticodon-binding domain of tRNA DMB87_RS10610 PF00133 tRNA synthetases class I (I, L, M and V) DMB87_RS10610 PF06827 Zinc finger found in FPG and IleRS DMB87_RS10615 PF01252 Signal peptidase (SPase) II DMB87_RS10620 PF04127 DNA / pantothenate metabolism flavoprotein DMB87_RS10620 PF02441 Flavoprotein DMB87_RS10625 PF00296 Luciferase-like monooxygenase DMB87_RS10630 PF00692 dUTPase DMB87_RS10635 PF00324 Amino acid permease DMB87_RS10640 PF17871 AAA lid domain DMB87_RS10640 PF07724 AAA domain (Cdc48 subfamily) DMB87_RS10640 PF02861 Clp amino terminal domain, pathogenicity island component DMB87_RS10640 PF00004 ATPase family associated with various cellular activities (AAA) DMB87_RS10640 PF10431 C-terminal, D2-small domain, of ClpB protein DMB87_RS10645 PF02617 ATP-dependent Clp protease adaptor protein ClpS DMB87_RS10650 PF00313 'Cold-shock' DNA-binding domain DMB87_RS10655 PF07732 Multicopper oxidase DMB87_RS10655 PF07731 Multicopper oxidase DMB87_RS10665 PF00180 Isocitrate/isopropylmalate dehydrogenase DMB87_RS10670 PF00849 RNA pseudouridylate synthase DMB87_RS10685 PF00009 Elongation factor Tu GTP binding domain DMB87_RS10685 PF03764 Elongation factor G, domain IV DMB87_RS10685 PF00679 Elongation factor G C-terminus DMB87_RS10685 PF14492 Elongation Factor G, domain II DMB87_RS10685 PF03144 Elongation factor Tu domain 2 DMB87_RS10695 PF03824 High-affinity nickel-transport protein DMB87_RS10700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DMB87_RS10705 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS10710 PF12911 N-terminal TM domain of oligopeptide transport permease C DMB87_RS10710 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS10715 PF00005 ABC transporter DMB87_RS10715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DMB87_RS10730 PF00248 Aldo/keto reductase family DMB87_RS10735 PF07702 UTRA domain DMB87_RS10735 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS10740 PF02515 CoA-transferase family III DMB87_RS10745 PF00285 Citrate synthase, C-terminal domain DMB87_RS10755 PF00155 Aminotransferase class I and II DMB87_RS10760 PF07690 Major Facilitator Superfamily DMB87_RS10770 PF04542 Sigma-70 region 2 DMB87_RS10770 PF04545 Sigma-70, region 4 DMB87_RS10775 PF00574 Clp protease DMB87_RS10780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DMB87_RS10780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DMB87_RS10785 PF13742 OB-fold nucleic acid binding domain DMB87_RS10785 PF02601 Exonuclease VII, large subunit DMB87_RS10790 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DMB87_RS10795 PF03966 Trm112p-like protein DMB87_RS10800 PF02348 Cytidylyltransferase DMB87_RS10805 PF05191 Adenylate kinase, active site lid DMB87_RS10810 PF00106 short chain dehydrogenase DMB87_RS10815 PF13369 Transglutaminase-like superfamily DMB87_RS10820 PF03023 Lipid II flippase MurJ DMB87_RS10825 PF01649 Ribosomal protein S20 DMB87_RS10835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DMB87_RS10835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DMB87_RS10845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS10845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS10845 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS10850 PF10417 C-terminal domain of 1-Cys peroxiredoxin DMB87_RS10850 PF00578 AhpC/TSA family DMB87_RS10870 PF00114 Pilin (bacterial filament) DMB87_RS10870 PF07963 Prokaryotic N-terminal methylation motif DMB87_RS10895 PF03477 ATP cone domain DMB87_RS10900 PF00464 Serine hydroxymethyltransferase DMB87_RS10905 PF00106 short chain dehydrogenase DMB87_RS10910 PF03061 Thioesterase superfamily DMB87_RS10915 PF01618 MotA/TolQ/ExbB proton channel family DMB87_RS10920 PF02472 Biopolymer transport protein ExbD/TolR DMB87_RS10930 PF04052 TolB amino-terminal domain DMB87_RS10930 PF07676 WD40-like Beta Propeller Repeat DMB87_RS10935 PF00691 OmpA family DMB87_RS10955 PF04264 YceI-like domain DMB87_RS10965 PF01292 Prokaryotic cytochrome b561 DMB87_RS10970 PF03466 LysR substrate binding domain DMB87_RS10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS10980 PF00924 Mechanosensitive ion channel DMB87_RS10980 PF05552 Conserved TM helix DMB87_RS10985 PF09335 SNARE associated Golgi protein DMB87_RS10990 PF08676 MutL C terminal dimerisation domain DMB87_RS10990 PF01119 DNA mismatch repair protein, C-terminal domain DMB87_RS11000 PF01232 Mannitol dehydrogenase Rossmann domain DMB87_RS11000 PF08125 Mannitol dehydrogenase C-terminal domain DMB87_RS11005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DMB87_RS11005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DMB87_RS11010 PF00325 Bacterial regulatory proteins, crp family DMB87_RS11010 PF04198 Putative sugar-binding domain DMB87_RS11025 PF17912 MalK OB fold domain DMB87_RS11025 PF00005 ABC transporter DMB87_RS11030 PF13419 Haloacid dehalogenase-like hydrolase DMB87_RS11035 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS11040 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS11060 PF00005 ABC transporter DMB87_RS11065 PF00950 ABC 3 transport family DMB87_RS11070 PF00756 Putative esterase DMB87_RS11075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DMB87_RS11075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DMB87_RS11080 PF00860 Permease family DMB87_RS11085 PF02321 Outer membrane efflux protein DMB87_RS11090 PF00873 AcrB/AcrD/AcrF family DMB87_RS11095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMB87_RS11095 PF00529 HlyD membrane-fusion protein of T1SS DMB87_RS11100 PF08361 MAATS-type transcriptional repressor, C-terminal region DMB87_RS11100 PF00440 Bacterial regulatory proteins, tetR family DMB87_RS11105 PF00857 Isochorismatase family DMB87_RS11130 PF13180 PDZ domain DMB87_RS11135 PF08521 Two-component sensor kinase N-terminal DMB87_RS11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS11135 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS11140 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS11140 PF00072 Response regulator receiver domain DMB87_RS11145 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DMB87_RS11150 PF04116 Fatty acid hydroxylase superfamily DMB87_RS11160 PF03481 Putative GTP-binding controlling metal-binding DMB87_RS11160 PF01300 Telomere recombination DMB87_RS11165 PF02222 ATP-grasp domain DMB87_RS11165 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DMB87_RS11170 PF00731 AIR carboxylase DMB87_RS11175 PF01259 SAICAR synthetase DMB87_RS11180 PF01116 Fructose-bisphosphate aldolase class-II DMB87_RS11185 PF00224 Pyruvate kinase, barrel domain DMB87_RS11185 PF02887 Pyruvate kinase, alpha/beta domain DMB87_RS11195 PF00162 Phosphoglycerate kinase DMB87_RS11205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DMB87_RS11215 PF00561 alpha/beta hydrolase fold DMB87_RS11230 PF01967 MoaC family DMB87_RS11240 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DMB87_RS11250 PF00114 Pilin (bacterial filament) DMB87_RS11250 PF07963 Prokaryotic N-terminal methylation motif DMB87_RS11255 PF03741 Integral membrane protein TerC family DMB87_RS11260 PF00549 CoA-ligase DMB87_RS11260 PF02629 CoA binding domain DMB87_RS11265 PF00549 CoA-ligase DMB87_RS11265 PF08442 ATP-grasp domain DMB87_RS11275 PF02631 RecX family DMB87_RS11280 PF00154 recA bacterial DNA recombination protein DMB87_RS11285 PF00072 Response regulator receiver domain DMB87_RS11285 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS11290 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS11290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS11295 PF00083 Sugar (and other) transporter DMB87_RS11295 PF08946 Osmosensory transporter coiled coil DMB87_RS11305 PF03707 Bacterial signalling protein N terminal repeat DMB87_RS11305 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS11305 PF00563 EAL domain DMB87_RS11310 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS11310 PF07729 FCD domain DMB87_RS11315 PF13378 Enolase C-terminal domain-like DMB87_RS11315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DMB87_RS11325 PF05425 Copper resistance protein D DMB87_RS11335 PF00034 Cytochrome c DMB87_RS11335 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DMB87_RS11340 PF03006 Haemolysin-III related DMB87_RS11345 PF00271 Helicase conserved C-terminal domain DMB87_RS11345 PF00270 DEAD/DEAH box helicase DMB87_RS11370 PF13419 Haloacid dehalogenase-like hydrolase DMB87_RS11375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DMB87_RS11380 PF01381 Helix-turn-helix DMB87_RS11380 PF07883 Cupin domain DMB87_RS11385 PF00919 Uncharacterized protein family UPF0004 DMB87_RS11385 PF04055 Radical SAM superfamily DMB87_RS11385 PF01938 TRAM domain DMB87_RS11390 PF02562 PhoH-like protein DMB87_RS11395 PF02130 Uncharacterized protein family UPF0054 DMB87_RS11400 PF04752 ChaC-like protein DMB87_RS11410 PF03471 Transporter associated domain DMB87_RS11410 PF00571 CBS domain DMB87_RS11415 PF00795 Carbon-nitrogen hydrolase DMB87_RS11420 PF02091 Glycyl-tRNA synthetase alpha subunit DMB87_RS11425 PF02092 Glycyl-tRNA synthetase beta subunit DMB87_RS11425 PF05746 DALR anticodon binding domain DMB87_RS11435 PF01553 Acyltransferase DMB87_RS11455 PF03808 Glycosyl transferase WecB/TagA/CpsF family DMB87_RS11475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DMB87_RS11475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DMB87_RS11475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DMB87_RS11480 PF02350 UDP-N-acetylglucosamine 2-epimerase DMB87_RS11485 PF02706 Chain length determinant protein DMB87_RS11485 PF13807 G-rich domain on putative tyrosine kinase DMB87_RS11485 PF13614 AAA domain DMB87_RS11490 PF01451 Low molecular weight phosphotyrosine protein phosphatase DMB87_RS11495 PF10531 SLBB domain DMB87_RS11495 PF02563 Polysaccharide biosynthesis/export protein DMB87_RS11500 PF02397 Bacterial sugar transferase DMB87_RS11505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMB87_RS11510 PF02558 Ketopantoate reductase PanE/ApbA DMB87_RS11510 PF08546 Ketopantoate reductase PanE/ApbA C terminal DMB87_RS11515 PF00398 Ribosomal RNA adenine dimethylase DMB87_RS11520 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DMB87_RS11525 PF00639 PPIC-type PPIASE domain DMB87_RS11525 PF09312 SurA N-terminal domain DMB87_RS11530 PF04453 LPS transport system D DMB87_RS11535 PF01636 Phosphotransferase enzyme family DMB87_RS11540 PF00483 Nucleotidyl transferase DMB87_RS11545 PF00005 ABC transporter DMB87_RS11545 PF00664 ABC transporter transmembrane region DMB87_RS11550 PF03061 Thioesterase superfamily DMB87_RS11555 PF03707 Bacterial signalling protein N terminal repeat DMB87_RS11555 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS11555 PF00563 EAL domain DMB87_RS11565 PF02634 FdhD/NarQ family DMB87_RS11570 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS11575 PF00108 Thiolase, N-terminal domain DMB87_RS11575 PF02803 Thiolase, C-terminal domain DMB87_RS11580 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS11580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMB87_RS11580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMB87_RS11585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS11585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS11585 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS11585 PF12806 Acetyl-CoA dehydrogenase C-terminal like DMB87_RS11595 PF13091 PLD-like domain DMB87_RS11600 PF00293 NUDIX domain DMB87_RS11605 PF01336 OB-fold nucleic acid binding domain DMB87_RS11605 PF00152 tRNA synthetases class II (D, K and N) DMB87_RS11605 PF02938 GAD domain DMB87_RS11620 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DMB87_RS11625 PF05724 Thiopurine S-methyltransferase (TPMT) DMB87_RS11630 PF03109 ABC1 family DMB87_RS11645 PF01209 ubiE/COQ5 methyltransferase family DMB87_RS11665 PF00291 Pyridoxal-phosphate dependent enzyme DMB87_RS11665 PF00585 C-terminal regulatory domain of Threonine dehydratase DMB87_RS11675 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DMB87_RS11675 PF14489 QueF-like protein DMB87_RS11680 PF00912 Transglycosylase DMB87_RS11685 PF08501 Shikimate dehydrogenase substrate binding domain DMB87_RS11685 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DMB87_RS11685 PF01488 Shikimate / quinate 5-dehydrogenase DMB87_RS11690 PF00773 RNB domain DMB87_RS11695 PF05728 Uncharacterised protein family (UPF0227) DMB87_RS11700 PF01225 Mur ligase family, catalytic domain DMB87_RS11700 PF08245 Mur ligase middle domain DMB87_RS11700 PF02875 Mur ligase family, glutamate ligase domain DMB87_RS11710 PF00578 AhpC/TSA family DMB87_RS11715 PF01220 Dehydroquinase class II DMB87_RS11720 PF00364 Biotin-requiring enzyme DMB87_RS11725 PF00289 Biotin carboxylase, N-terminal domain DMB87_RS11725 PF02785 Biotin carboxylase C-terminal domain DMB87_RS11725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DMB87_RS11740 PF08534 Redoxin DMB87_RS11745 PF00294 pfkB family carbohydrate kinase DMB87_RS11745 PF01467 Cytidylyltransferase-like DMB87_RS11765 PF00268 Ribonucleotide reductase, small chain DMB87_RS11770 PF02867 Ribonucleotide reductase, barrel domain DMB87_RS11770 PF00317 Ribonucleotide reductase, all-alpha domain DMB87_RS11770 PF03477 ATP cone domain DMB87_RS11775 PF01510 N-acetylmuramoyl-L-alanine amidase DMB87_RS11790 PF00448 SRP54-type protein, GTPase domain DMB87_RS11790 PF02978 Signal peptide binding domain DMB87_RS11790 PF02881 SRP54-type protein, helical bundle domain DMB87_RS11795 PF00156 Phosphoribosyl transferase domain DMB87_RS11800 PF01914 MarC family integral membrane protein DMB87_RS11805 PF04073 Aminoacyl-tRNA editing domain DMB87_RS11805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DMB87_RS11805 PF03129 Anticodon binding domain DMB87_RS11810 PF00293 NUDIX domain DMB87_RS11820 PF01472 PUA domain DMB87_RS11820 PF00696 Amino acid kinase family DMB87_RS11825 PF01018 GTP1/OBG DMB87_RS11825 PF01926 50S ribosome-binding GTPase DMB87_RS11830 PF01016 Ribosomal L27 protein DMB87_RS11835 PF00829 Ribosomal prokaryotic L21 protein DMB87_RS11840 PF00348 Polyprenyl synthetase DMB87_RS11850 PF01595 Cyclin M transmembrane N-terminal domain DMB87_RS11850 PF03471 Transporter associated domain DMB87_RS11850 PF00571 CBS domain DMB87_RS11855 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DMB87_RS11855 PF00437 Type II/IV secretion system protein DMB87_RS11860 PF00482 Type II secretion system (T2SS), protein F DMB87_RS11865 PF01478 Type IV leader peptidase family DMB87_RS11865 PF06750 Bacterial Peptidase A24 N-terminal domain DMB87_RS11870 PF01121 Dephospho-CoA kinase DMB87_RS11875 PF07072 Cell division protein DMB87_RS11880 PF03884 DNA gyrase inhibitor YacG DMB87_RS11885 PF00293 NUDIX domain DMB87_RS11895 PF01960 ArgJ family DMB87_RS11900 PF02810 SEC-C motif DMB87_RS11900 PF07516 SecA Wing and Scaffold domain DMB87_RS11900 PF07517 SecA DEAD-like domain DMB87_RS11900 PF01043 SecA preprotein cross-linking domain DMB87_RS11910 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DMB87_RS11915 PF08534 Redoxin DMB87_RS11920 PF00091 Tubulin/FtsZ family, GTPase domain DMB87_RS11920 PF12327 FtsZ family, C-terminal domain DMB87_RS11925 PF02491 SHS2 domain inserted in FTSA DMB87_RS11930 PF08478 POTRA domain, FtsQ-type DMB87_RS11930 PF03799 Cell division protein FtsQ DMB87_RS11935 PF01820 D-ala D-ala ligase N-terminus DMB87_RS11935 PF07478 D-ala D-ala ligase C-terminus DMB87_RS11940 PF02875 Mur ligase family, glutamate ligase domain DMB87_RS11940 PF08245 Mur ligase middle domain DMB87_RS11940 PF01225 Mur ligase family, catalytic domain DMB87_RS11945 PF04101 Glycosyltransferase family 28 C-terminal domain DMB87_RS11945 PF03033 Glycosyltransferase family 28 N-terminal domain DMB87_RS11950 PF01098 Cell cycle protein DMB87_RS11955 PF08245 Mur ligase middle domain DMB87_RS11955 PF02875 Mur ligase family, glutamate ligase domain DMB87_RS11960 PF00953 Glycosyl transferase family 4 DMB87_RS11960 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DMB87_RS11965 PF02875 Mur ligase family, glutamate ligase domain DMB87_RS11965 PF08245 Mur ligase middle domain DMB87_RS11965 PF01225 Mur ligase family, catalytic domain DMB87_RS11970 PF08245 Mur ligase middle domain DMB87_RS11970 PF02875 Mur ligase family, glutamate ligase domain DMB87_RS11975 PF03717 Penicillin-binding Protein dimerisation domain DMB87_RS11975 PF00905 Penicillin binding protein transpeptidase domain DMB87_RS11980 PF04999 Cell division protein FtsL DMB87_RS11985 PF01795 MraW methylase family DMB87_RS11990 PF02381 MraZ protein, putative antitoxin-like DMB87_RS11995 PF03232 Ubiquinone biosynthesis protein COQ7 DMB87_RS12000 PF13609 Gram-negative porin DMB87_RS12005 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS12005 PF00501 AMP-binding enzyme DMB87_RS12010 PF00384 Molybdopterin oxidoreductase DMB87_RS12010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMB87_RS12010 PF01568 Molydopterin dinucleotide binding domain DMB87_RS12015 PF01546 Peptidase family M20/M25/M40 DMB87_RS12015 PF07687 Peptidase dimerisation domain DMB87_RS12045 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS12055 PF00108 Thiolase, N-terminal domain DMB87_RS12055 PF02803 Thiolase, C-terminal domain DMB87_RS12060 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS12070 PF14535 AMP-binding enzyme C-terminal domain DMB87_RS12070 PF00501 AMP-binding enzyme DMB87_RS12075 PF03562 MltA specific insert domain DMB87_RS12075 PF06725 3D domain DMB87_RS12080 PF04379 ApaG domain DMB87_RS12085 PF00834 Ribulose-phosphate 3 epimerase family DMB87_RS12090 PF13419 Haloacid dehalogenase-like hydrolase DMB87_RS12095 PF00425 chorismate binding enzyme DMB87_RS12095 PF04715 Anthranilate synthase component I, N terminal region DMB87_RS12100 PF00117 Glutamine amidotransferase class-I DMB87_RS12105 PF02885 Glycosyl transferase family, helical bundle domain DMB87_RS12105 PF00591 Glycosyl transferase family, a/b domain DMB87_RS12110 PF00218 Indole-3-glycerol phosphate synthase DMB87_RS12120 PF03167 Uracil DNA glycosylase superfamily DMB87_RS12125 PF02525 Flavodoxin-like fold DMB87_RS12135 PF10411 Disulfide bond isomerase protein N-terminus DMB87_RS12135 PF13098 Thioredoxin-like domain DMB87_RS12140 PF01494 FAD binding domain DMB87_RS12145 PF00175 Oxidoreductase NAD-binding domain DMB87_RS12145 PF00042 Globin DMB87_RS12145 PF00970 Oxidoreductase FAD-binding domain DMB87_RS12150 PF06071 Protein of unknown function (DUF933) DMB87_RS12150 PF01926 50S ribosome-binding GTPase DMB87_RS12155 PF00005 ABC transporter DMB87_RS12155 PF12848 ABC transporter DMB87_RS12165 PF00557 Metallopeptidase family M24 DMB87_RS12165 PF01321 Creatinase/Prolidase N-terminal domain DMB87_RS12175 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS12175 PF00072 Response regulator receiver domain DMB87_RS12180 PF01488 Shikimate / quinate 5-dehydrogenase DMB87_RS12180 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DMB87_RS12180 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DMB87_RS12185 PF03462 PCRF domain DMB87_RS12185 PF00472 RF-1 domain DMB87_RS12190 PF17827 PrmC N-terminal domain DMB87_RS12190 PF05175 Methyltransferase small domain DMB87_RS12195 PF00462 Glutaredoxin DMB87_RS12200 PF02441 Flavoprotein DMB87_RS12205 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DMB87_RS12210 PF13520 Amino acid permease DMB87_RS12215 PF00313 'Cold-shock' DNA-binding domain DMB87_RS12220 PF00012 Hsp70 protein DMB87_RS12255 PF05175 Methyltransferase small domain DMB87_RS12270 PF04386 Stringent starvation protein B DMB87_RS12275 PF00043 Glutathione S-transferase, C-terminal domain DMB87_RS12275 PF02798 Glutathione S-transferase, N-terminal domain DMB87_RS12280 PF02167 Cytochrome C1 family DMB87_RS12285 PF00033 Cytochrome b/b6/petB DMB87_RS12285 PF00032 Cytochrome b(C-terminal)/b6/petD DMB87_RS12290 PF00355 Rieske [2Fe-2S] domain DMB87_RS12290 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DMB87_RS12295 PF01784 NIF3 (NGG1p interacting factor 3) DMB87_RS12300 PF13180 PDZ domain DMB87_RS12305 PF00902 Sec-independent protein translocase protein (TatC) DMB87_RS12310 PF02416 mttA/Hcf106 family DMB87_RS12315 PF02416 mttA/Hcf106 family DMB87_RS12330 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DMB87_RS12335 PF01502 Phosphoribosyl-AMP cyclohydrolase DMB87_RS12340 PF00977 Histidine biosynthesis protein DMB87_RS12345 PF00977 Histidine biosynthesis protein DMB87_RS12350 PF00117 Glutamine amidotransferase class-I DMB87_RS12355 PF00475 Imidazoleglycerol-phosphate dehydratase DMB87_RS12360 PF00155 Aminotransferase class I and II DMB87_RS12365 PF00815 Histidinol dehydrogenase DMB87_RS12370 PF01634 ATP phosphoribosyltransferase DMB87_RS12375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DMB87_RS12385 PF01061 ABC-2 type transporter DMB87_RS12390 PF00005 ABC transporter DMB87_RS12410 PF02470 MlaD protein DMB87_RS12415 PF02405 Permease MlaE DMB87_RS12420 PF00005 ABC transporter DMB87_RS12425 PF02581 Thiamine monophosphate synthase DMB87_RS12430 PF05690 Thiazole biosynthesis protein ThiG DMB87_RS12440 PF01266 FAD dependent oxidoreductase DMB87_RS12445 PF00005 ABC transporter DMB87_RS12445 PF06472 ABC transporter transmembrane region 2 DMB87_RS12455 PF07690 Major Facilitator Superfamily DMB87_RS12460 PF01266 FAD dependent oxidoreductase DMB87_RS12470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DMB87_RS12470 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMB87_RS12475 PF00310 Glutamine amidotransferases class-II DMB87_RS12475 PF04898 Glutamate synthase central domain DMB87_RS12475 PF01645 Conserved region in glutamate synthase DMB87_RS12475 PF01493 GXGXG motif DMB87_RS12495 PF03009 Glycerophosphoryl diester phosphodiesterase family DMB87_RS12500 PF01966 HD domain DMB87_RS12500 PF13286 Phosphohydrolase-associated domain DMB87_RS12505 PF01761 3-dehydroquinate synthase DMB87_RS12510 PF01202 Shikimate kinase DMB87_RS12515 PF07660 Secretin and TonB N terminus short domain DMB87_RS12515 PF03958 Bacterial type II/III secretion system short domain DMB87_RS12515 PF00263 Bacterial type II and III secretion system protein DMB87_RS12515 PF11741 AMIN domain DMB87_RS12535 PF00912 Transglycosylase DMB87_RS12535 PF17092 Penicillin-binding protein OB-like domain DMB87_RS12535 PF00905 Penicillin binding protein transpeptidase domain DMB87_RS12540 PF01491 Frataxin-like domain DMB87_RS12550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DMB87_RS12550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DMB87_RS12555 PF01794 Ferric reductase like transmembrane component DMB87_RS12560 PF00174 Oxidoreductase molybdopterin binding domain DMB87_RS12565 PF01578 Cytochrome C assembly protein DMB87_RS12570 PF05140 ResB-like family DMB87_RS12575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DMB87_RS12580 PF01926 50S ribosome-binding GTPase DMB87_RS12585 PF00490 Delta-aminolevulinic acid dehydratase DMB87_RS12590 PF11412 Disulphide bond corrector protein DsbC DMB87_RS12590 PF02683 Cytochrome C biogenesis protein transmembrane region DMB87_RS12600 PF01196 Ribosomal protein L17 DMB87_RS12605 PF01000 RNA polymerase Rpb3/RpoA insert domain DMB87_RS12605 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DMB87_RS12605 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DMB87_RS12610 PF00163 Ribosomal protein S4/S9 N-terminal domain DMB87_RS12610 PF01479 S4 domain DMB87_RS12615 PF00411 Ribosomal protein S11 DMB87_RS12620 PF00416 Ribosomal protein S13/S18 DMB87_RS12625 PF00444 Ribosomal protein L36 DMB87_RS12630 PF01176 Translation initiation factor 1A / IF-1 DMB87_RS12635 PF00344 SecY translocase DMB87_RS12640 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DMB87_RS12645 PF00327 Ribosomal protein L30p/L7e DMB87_RS12650 PF00333 Ribosomal protein S5, N-terminal domain DMB87_RS12650 PF03719 Ribosomal protein S5, C-terminal domain DMB87_RS12655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DMB87_RS12660 PF00347 Ribosomal protein L6 DMB87_RS12665 PF00410 Ribosomal protein S8 DMB87_RS12670 PF00253 Ribosomal protein S14p/S29e DMB87_RS12675 PF00281 Ribosomal protein L5 DMB87_RS12675 PF00673 ribosomal L5P family C-terminus DMB87_RS12680 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DMB87_RS12685 PF00238 Ribosomal protein L14p/L23e DMB87_RS12690 PF00366 Ribosomal protein S17 DMB87_RS12695 PF00831 Ribosomal L29 protein DMB87_RS12700 PF00252 Ribosomal protein L16p/L10e DMB87_RS12705 PF00189 Ribosomal protein S3, C-terminal domain DMB87_RS12705 PF07650 KH domain DMB87_RS12710 PF00237 Ribosomal protein L22p/L17e DMB87_RS12715 PF00203 Ribosomal protein S19 DMB87_RS12720 PF00181 Ribosomal Proteins L2, RNA binding domain DMB87_RS12720 PF03947 Ribosomal Proteins L2, C-terminal domain DMB87_RS12725 PF00276 Ribosomal protein L23 DMB87_RS12730 PF00573 Ribosomal protein L4/L1 family DMB87_RS12735 PF00297 Ribosomal protein L3 DMB87_RS12740 PF00338 Ribosomal protein S10p/S20e DMB87_RS12745 PF00009 Elongation factor Tu GTP binding domain DMB87_RS12745 PF03144 Elongation factor Tu domain 2 DMB87_RS12745 PF03143 Elongation factor Tu C-terminal domain DMB87_RS12750 PF03144 Elongation factor Tu domain 2 DMB87_RS12750 PF00679 Elongation factor G C-terminus DMB87_RS12750 PF14492 Elongation Factor G, domain II DMB87_RS12750 PF03764 Elongation factor G, domain IV DMB87_RS12750 PF00009 Elongation factor Tu GTP binding domain DMB87_RS12755 PF00177 Ribosomal protein S7p/S5e DMB87_RS12760 PF00164 Ribosomal protein S12/S23 DMB87_RS12770 PF00271 Helicase conserved C-terminal domain DMB87_RS12770 PF09382 RQC domain DMB87_RS12770 PF16124 RecQ zinc-binding DMB87_RS12770 PF00570 HRDC domain DMB87_RS12770 PF00270 DEAD/DEAH box helicase DMB87_RS12780 PF00698 Acyl transferase domain DMB87_RS12800 PF00005 ABC transporter DMB87_RS12800 PF02687 FtsX-like permease family DMB87_RS12800 PF12704 MacB-like periplasmic core domain DMB87_RS12810 PF00005 ABC transporter DMB87_RS12825 PF02801 Beta-ketoacyl synthase, C-terminal domain DMB87_RS12825 PF00109 Beta-ketoacyl synthase, N-terminal domain DMB87_RS12830 PF08669 Glycine cleavage T-protein C-terminal barrel domain DMB87_RS12830 PF01571 Aminomethyltransferase folate-binding domain DMB87_RS12840 PF07977 FabA-like domain DMB87_RS12850 PF01648 4'-phosphopantetheinyl transferase superfamily DMB87_RS12860 PF00623 RNA polymerase Rpb1, domain 2 DMB87_RS12860 PF05000 RNA polymerase Rpb1, domain 4 DMB87_RS12860 PF04998 RNA polymerase Rpb1, domain 5 DMB87_RS12860 PF04983 RNA polymerase Rpb1, domain 3 DMB87_RS12860 PF04997 RNA polymerase Rpb1, domain 1 DMB87_RS12865 PF04563 RNA polymerase beta subunit DMB87_RS12865 PF10385 RNA polymerase beta subunit external 1 domain DMB87_RS12865 PF04561 RNA polymerase Rpb2, domain 2 DMB87_RS12865 PF04565 RNA polymerase Rpb2, domain 3 DMB87_RS12865 PF00562 RNA polymerase Rpb2, domain 6 DMB87_RS12865 PF04560 RNA polymerase Rpb2, domain 7 DMB87_RS12870 PF00542 Ribosomal protein L7/L12 C-terminal domain DMB87_RS12870 PF16320 Ribosomal protein L7/L12 dimerisation domain DMB87_RS12875 PF00466 Ribosomal protein L10 DMB87_RS12880 PF00687 Ribosomal protein L1p/L10e family DMB87_RS12885 PF03946 Ribosomal protein L11, N-terminal domain DMB87_RS12885 PF00298 Ribosomal protein L11, RNA binding domain DMB87_RS12890 PF00467 KOW motif DMB87_RS12890 PF02357 Transcription termination factor nusG DMB87_RS12895 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DMB87_RS12905 PF03143 Elongation factor Tu C-terminal domain DMB87_RS12905 PF03144 Elongation factor Tu domain 2 DMB87_RS12905 PF00009 Elongation factor Tu GTP binding domain DMB87_RS12955 PF05138 Phenylacetic acid catabolic protein DMB87_RS12960 PF06243 Phenylacetic acid degradation B DMB87_RS12965 PF05138 Phenylacetic acid catabolic protein DMB87_RS12970 PF01883 Iron-sulfur cluster assembly protein DMB87_RS12975 PF00175 Oxidoreductase NAD-binding domain DMB87_RS12975 PF00970 Oxidoreductase FAD-binding domain DMB87_RS12975 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS12985 PF00440 Bacterial regulatory proteins, tetR family DMB87_RS12985 PF17932 Tetracyclin repressor-like, C-terminal domain DMB87_RS12995 PF01037 Lrp/AsnC ligand binding domain DMB87_RS13000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMB87_RS13015 PF01515 Phosphate acetyl/butaryl transferase DMB87_RS13015 PF00390 Malic enzyme, N-terminal domain DMB87_RS13015 PF03949 Malic enzyme, NAD binding domain DMB87_RS13020 PF07690 Major Facilitator Superfamily DMB87_RS13025 PF00156 Phosphoribosyl transferase domain DMB87_RS13030 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS13030 PF00072 Response regulator receiver domain DMB87_RS13035 PF01161 Phosphatidylethanolamine-binding protein DMB87_RS13040 PF01118 Semialdehyde dehydrogenase, NAD binding domain DMB87_RS13080 PF02146 Sir2 family DMB87_RS13095 PF01380 SIS domain DMB87_RS13100 PF12804 MobA-like NTP transferase domain DMB87_RS13100 PF00132 Bacterial transferase hexapeptide (six repeats) DMB87_RS13105 PF01171 PP-loop family DMB87_RS13130 PF01966 HD domain DMB87_RS13130 PF12627 Probable RNA and SrmB- binding site of polymerase A DMB87_RS13130 PF01743 Poly A polymerase head domain DMB87_RS13140 PF01370 NAD dependent epimerase/dehydratase family DMB87_RS13145 PF14718 Soluble lytic murein transglycosylase L domain DMB87_RS13145 PF01464 Transglycosylase SLT domain DMB87_RS13150 PF01812 5-formyltetrahydrofolate cyclo-ligase family DMB87_RS13160 PF02682 Carboxyltransferase domain, subdomain C and D DMB87_RS13165 PF02626 Carboxyltransferase domain, subdomain A and B DMB87_RS13170 PF03746 LamB/YcsF family DMB87_RS13185 PF02709 N-terminal domain of galactosyltransferase DMB87_RS13185 PF00535 Glycosyl transferase family 2 DMB87_RS13200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DMB87_RS13200 PF00005 ABC transporter DMB87_RS13205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DMB87_RS13205 PF00005 ABC transporter DMB87_RS13210 PF12911 N-terminal TM domain of oligopeptide transport permease C DMB87_RS13210 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS13215 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS13220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DMB87_RS13230 PF02219 Methylenetetrahydrofolate reductase DMB87_RS13235 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DMB87_RS13240 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DMB87_RS13240 PF05221 S-adenosyl-L-homocysteine hydrolase DMB87_RS13245 PF00535 Glycosyl transferase family 2 DMB87_RS13250 PF04172 LrgB-like family DMB87_RS13255 PF03788 LrgA family DMB87_RS13260 PF03466 LysR substrate binding domain DMB87_RS13260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS13265 PF00691 OmpA family DMB87_RS13265 PF01389 OmpA-like transmembrane domain DMB87_RS13275 PF00171 Aldehyde dehydrogenase family DMB87_RS13280 PF01312 FlhB HrpN YscU SpaS Family DMB87_RS13295 PF02561 Flagellar protein FliS DMB87_RS13300 PF02049 Flagellar hook-basal body complex protein FliE DMB87_RS13305 PF01514 Secretory protein of YscJ/FliF family DMB87_RS13305 PF08345 Flagellar M-ring protein C-terminal DMB87_RS13310 PF14841 FliG middle domain DMB87_RS13310 PF01706 FliG C-terminal domain DMB87_RS13310 PF14842 FliG N-terminal domain DMB87_RS13320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMB87_RS13320 PF18269 T3SS EscN ATPase C-terminal domain DMB87_RS13345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DMB87_RS13345 PF02154 Flagellar motor switch protein FliM DMB87_RS13350 PF16973 Flagellar motor switch protein FliN N-terminal DMB87_RS13350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DMB87_RS13355 PF04347 Flagellar biosynthesis protein, FliO DMB87_RS13360 PF00813 FliP family DMB87_RS13365 PF01313 Bacterial export proteins, family 3 DMB87_RS13370 PF01311 Bacterial export proteins, family 1 DMB87_RS13380 PF05860 haemagglutination activity domain DMB87_RS13385 PF00669 Bacterial flagellin N-terminal helical region DMB87_RS13390 PF00460 Flagella basal body rod protein DMB87_RS13390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMB87_RS13395 PF07238 PilZ domain DMB87_RS13395 PF07317 Flagellar regulator YcgR DMB87_RS13400 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DMB87_RS13400 PF10135 Rod binding protein DMB87_RS13405 PF02119 Flagellar P-ring protein DMB87_RS13410 PF02107 Flagellar L-ring protein DMB87_RS13415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMB87_RS13415 PF00460 Flagella basal body rod protein DMB87_RS13420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMB87_RS13420 PF00460 Flagella basal body rod protein DMB87_RS13425 PF00460 Flagella basal body rod protein DMB87_RS13425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMB87_RS13425 PF07559 Flagellar basal body protein FlaE DMB87_RS13430 PF03963 Flagellar hook capping protein - N-terminal region DMB87_RS13430 PF13861 FlgD Tudor-like domain DMB87_RS13430 PF13860 FlgD Ig-like domain DMB87_RS13435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DMB87_RS13435 PF00460 Flagella basal body rod protein DMB87_RS13440 PF00460 Flagella basal body rod protein DMB87_RS13445 PF13144 Chaperone for flagella basal body P-ring formation DMB87_RS13475 PF04542 Sigma-70 region 2 DMB87_RS13475 PF04539 Sigma-70 region 3 DMB87_RS13475 PF04545 Sigma-70, region 4 DMB87_RS13485 PF00448 SRP54-type protein, GTPase domain DMB87_RS13495 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DMB87_RS13500 PF00771 FHIPEP family DMB87_RS13505 PF01312 FlhB HrpN YscU SpaS Family DMB87_RS13520 PF04344 Chemotaxis phosphatase, CheZ DMB87_RS13525 PF00072 Response regulator receiver domain DMB87_RS13530 PF00072 Response regulator receiver domain DMB87_RS13530 PF01339 CheB methylesterase DMB87_RS13535 PF03975 CheD chemotactic sensory transduction DMB87_RS13540 PF03705 CheR methyltransferase, all-alpha domain DMB87_RS13540 PF01739 CheR methyltransferase, SAM binding domain DMB87_RS13545 PF00672 HAMP domain DMB87_RS13545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMB87_RS13545 PF02203 Tar ligand binding domain homologue DMB87_RS13550 PF01584 CheW-like domain DMB87_RS13555 PF02895 Signal transducing histidine kinase, homodimeric domain DMB87_RS13555 PF01627 Hpt domain DMB87_RS13555 PF01584 CheW-like domain DMB87_RS13555 PF09078 CheY binding DMB87_RS13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS13560 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS13560 PF00072 Response regulator receiver domain DMB87_RS13565 PF13677 Membrane MotB of proton-channel complex MotA/MotB DMB87_RS13565 PF00691 OmpA family DMB87_RS13570 PF01618 MotA/TolQ/ExbB proton channel family DMB87_RS13575 PF05247 Flagellar transcriptional activator (FlhD) DMB87_RS13580 PF13439 Glycosyltransferase Family 4 DMB87_RS13585 PF00816 H-NS histone family DMB87_RS13590 PF00230 Major intrinsic protein DMB87_RS13610 PF03352 Methyladenine glycosylase DMB87_RS13620 PF01165 Ribosomal protein S21 DMB87_RS13625 PF00248 Aldo/keto reductase family DMB87_RS13630 PF05506 Domain of unknown function (DUF756) DMB87_RS13630 PF04185 Phosphoesterase family DMB87_RS13640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS13640 PF03466 LysR substrate binding domain DMB87_RS13660 PF12833 Helix-turn-helix domain DMB87_RS13665 PF05853 beta-keto acid cleavage enzyme DMB87_RS13670 PF05853 beta-keto acid cleavage enzyme DMB87_RS13680 PF00107 Zinc-binding dehydrogenase DMB87_RS13680 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS13685 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DMB87_RS13700 PF00501 AMP-binding enzyme DMB87_RS13700 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS13705 PF13609 Gram-negative porin DMB87_RS13725 PF00589 Phage integrase family DMB87_RS13725 PF13356 Arm DNA-binding domain DMB87_RS13740 PF13361 UvrD-like helicase C-terminal domain DMB87_RS13740 PF00580 UvrD/REP helicase N-terminal domain DMB87_RS13745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DMB87_RS13745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DMB87_RS13755 PF01571 Aminomethyltransferase folate-binding domain DMB87_RS13755 PF08669 Glycine cleavage T-protein C-terminal barrel domain DMB87_RS13760 PF01597 Glycine cleavage H-protein DMB87_RS13765 PF02347 Glycine cleavage system P-protein DMB87_RS13775 PF03313 Serine dehydratase alpha chain DMB87_RS13775 PF03315 Serine dehydratase beta chain DMB87_RS13780 PF00205 Thiamine pyrophosphate enzyme, central domain DMB87_RS13780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMB87_RS13780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMB87_RS13785 PF13458 Periplasmic binding protein DMB87_RS13790 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DMB87_RS13790 PF01619 Proline dehydrogenase DMB87_RS13790 PF14850 DNA-binding domain of Proline dehydrogenase DMB87_RS13790 PF00171 Aldehyde dehydrogenase family DMB87_RS13795 PF00270 DEAD/DEAH box helicase DMB87_RS13795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DMB87_RS13795 PF18074 Primosomal protein N C-terminal domain DMB87_RS13795 PF17764 3′ DNA-binding domain (3′BD) DMB87_RS13795 PF00271 Helicase conserved C-terminal domain DMB87_RS13800 PF01208 Uroporphyrinogen decarboxylase (URO-D) DMB87_RS13805 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS13810 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS13810 PF00501 AMP-binding enzyme DMB87_RS13820 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DMB87_RS13820 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DMB87_RS13825 PF02874 ATP synthase alpha/beta family, beta-barrel domain DMB87_RS13825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMB87_RS13830 PF00231 ATP synthase DMB87_RS13835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMB87_RS13835 PF00306 ATP synthase alpha/beta chain, C terminal domain DMB87_RS13835 PF02874 ATP synthase alpha/beta family, beta-barrel domain DMB87_RS13840 PF00213 ATP synthase delta (OSCP) subunit DMB87_RS13845 PF00430 ATP synthase B/B' CF(0) DMB87_RS13850 PF00137 ATP synthase subunit C DMB87_RS13855 PF00119 ATP synthase A chain DMB87_RS13865 PF03600 Citrate transporter DMB87_RS13870 PF17762 HTH domain found in ParB protein DMB87_RS13870 PF02195 ParB-like nuclease domain DMB87_RS13875 PF13614 AAA domain DMB87_RS13880 PF02527 rRNA small subunit methyltransferase G DMB87_RS13885 PF01134 Glucose inhibited division protein A DMB87_RS13885 PF13932 GidA associated domain DMB87_RS13890 PF00005 ABC transporter DMB87_RS13895 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMB87_RS13895 PF00005 ABC transporter DMB87_RS13920 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS13930 PF00005 ABC transporter DMB87_RS13935 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMB87_RS13935 PF00005 ABC transporter DMB87_RS13940 PF05199 GMC oxidoreductase DMB87_RS13940 PF00732 GMC oxidoreductase DMB87_RS13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS13945 PF03466 LysR substrate binding domain DMB87_RS13955 PF01037 Lrp/AsnC ligand binding domain DMB87_RS13960 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DMB87_RS13965 PF01329 Pterin 4 alpha carbinolamine dehydratase DMB87_RS13975 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS13975 PF00072 Response regulator receiver domain DMB87_RS13980 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS13980 PF08521 Two-component sensor kinase N-terminal DMB87_RS13990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMB87_RS14005 PF04107 Glutamate-cysteine ligase family 2(GCS2) DMB87_RS14015 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DMB87_RS14015 PF01266 FAD dependent oxidoreductase DMB87_RS14020 PF00216 Bacterial DNA-binding protein DMB87_RS14025 PF02492 CobW/HypB/UreG, nucleotide-binding domain DMB87_RS14025 PF07683 Cobalamin synthesis protein cobW C-terminal domain DMB87_RS14030 PF01464 Transglycosylase SLT domain DMB87_RS14035 PF00263 Bacterial type II and III secretion system protein DMB87_RS14035 PF03958 Bacterial type II/III secretion system short domain DMB87_RS14040 PF00437 Type II/IV secretion system protein DMB87_RS14045 PF00482 Type II secretion system (T2SS), protein F DMB87_RS14055 PF08334 Type II secretion system (T2SS), protein G DMB87_RS14055 PF07963 Prokaryotic N-terminal methylation motif DMB87_RS14060 PF07963 Prokaryotic N-terminal methylation motif DMB87_RS14060 PF12019 Type II transport protein GspH DMB87_RS14065 PF02501 Type II secretion system (T2SS), protein I DMB87_RS14065 PF07963 Prokaryotic N-terminal methylation motif DMB87_RS14070 PF07963 Prokaryotic N-terminal methylation motif DMB87_RS14070 PF11612 Type II secretion system (T2SS), protein J DMB87_RS14075 PF03934 Type II secretion system (T2SS), protein K DMB87_RS14105 PF01047 MarR family DMB87_RS14110 PF07690 Major Facilitator Superfamily DMB87_RS14115 PF00691 OmpA family DMB87_RS14115 PF13505 Outer membrane protein beta-barrel domain DMB87_RS14125 PF04262 Glutamate-cysteine ligase DMB87_RS14130 PF06029 AlkA N-terminal domain DMB87_RS14130 PF00730 HhH-GPD superfamily base excision DNA repair protein DMB87_RS14130 PF02805 Metal binding domain of Ada DMB87_RS14130 PF12833 Helix-turn-helix domain DMB87_RS14135 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DMB87_RS14135 PF02805 Metal binding domain of Ada DMB87_RS14135 PF12833 Helix-turn-helix domain DMB87_RS14135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DMB87_RS14140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMB87_RS14145 PF07152 YaeQ protein DMB87_RS14155 PF01810 LysE type translocator DMB87_RS14165 PF13180 PDZ domain DMB87_RS14190 PF01926 50S ribosome-binding GTPase DMB87_RS14190 PF10396 GTP-binding protein TrmE N-terminus DMB87_RS14190 PF12631 MnmE helical domain DMB87_RS14200 PF02096 60Kd inner membrane protein DMB87_RS14200 PF14849 YidC periplasmic domain DMB87_RS14205 PF01809 Putative membrane protein insertion efficiency factor DMB87_RS14210 PF00825 Ribonuclease P DMB87_RS14215 PF00468 Ribosomal protein L34 DMB87_RS14225 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DMB87_RS14230 PF01979 Amidohydrolase family DMB87_RS14230 PF00449 Urease alpha-subunit, N-terminal domain DMB87_RS14240 PF03069 Acetamidase/Formamidase family DMB87_RS14265 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DMB87_RS14270 PF01799 [2Fe-2S] binding domain DMB87_RS14270 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS14275 PF03466 LysR substrate binding domain DMB87_RS14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS14280 PF03466 LysR substrate binding domain DMB87_RS14280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS14285 PF00860 Permease family DMB87_RS14290 PF01979 Amidohydrolase family DMB87_RS14310 PF03831 PhnA domain DMB87_RS14310 PF08274 PhnA Zinc-Ribbon DMB87_RS14325 PF00361 Proton-conducting membrane transporter DMB87_RS14330 PF00146 NADH dehydrogenase DMB87_RS14340 PF00361 Proton-conducting membrane transporter DMB87_RS14345 PF00374 Nickel-dependent hydrogenase DMB87_RS14345 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DMB87_RS14345 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DMB87_RS14350 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DMB87_RS14360 PF08808 RES domain DMB87_RS14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS14375 PF07690 Major Facilitator Superfamily DMB87_RS14380 PF00576 HIUase/Transthyretin family DMB87_RS14385 PF00576 HIUase/Transthyretin family DMB87_RS14390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DMB87_RS14400 PF00155 Aminotransferase class I and II DMB87_RS14405 PF00171 Aldehyde dehydrogenase family DMB87_RS14410 PF02913 FAD linked oxidases, C-terminal domain DMB87_RS14410 PF01565 FAD binding domain DMB87_RS14410 PF13183 4Fe-4S dicluster domain DMB87_RS14420 PF03466 LysR substrate binding domain DMB87_RS14420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS14425 PF01266 FAD dependent oxidoreductase DMB87_RS14430 PF00324 Amino acid permease DMB87_RS14435 PF13609 Gram-negative porin DMB87_RS14445 PF01979 Amidohydrolase family DMB87_RS14445 PF13382 Adenine deaminase C-terminal domain DMB87_RS14455 PF07715 TonB-dependent Receptor Plug Domain DMB87_RS14455 PF00593 TonB dependent receptor DMB87_RS14460 PF18331 PKHD-type hydroxylase C-terminal domain DMB87_RS14460 PF13640 2OG-Fe(II) oxygenase superfamily DMB87_RS14480 PF13609 Gram-negative porin DMB87_RS14490 PF12411 Choline sulfatase enzyme C terminal DMB87_RS14490 PF00884 Sulfatase DMB87_RS14495 PF03466 LysR substrate binding domain DMB87_RS14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS14500 PF01965 DJ-1/PfpI family DMB87_RS14500 PF12833 Helix-turn-helix domain DMB87_RS14505 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DMB87_RS14510 PF05853 beta-keto acid cleavage enzyme DMB87_RS14515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMB87_RS14515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMB87_RS14520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMB87_RS14520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMB87_RS14525 PF07859 alpha/beta hydrolase fold DMB87_RS14530 PF03707 Bacterial signalling protein N terminal repeat DMB87_RS14530 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS14530 PF00563 EAL domain DMB87_RS14535 PF13416 Bacterial extracellular solute-binding protein DMB87_RS14540 PF00857 Isochorismatase family DMB87_RS14550 PF00356 Bacterial regulatory proteins, lacI family DMB87_RS14555 PF00860 Permease family DMB87_RS14560 PF01979 Amidohydrolase family DMB87_RS14570 PF13609 Gram-negative porin DMB87_RS14575 PF14525 AraC-binding-like domain DMB87_RS14575 PF12833 Helix-turn-helix domain DMB87_RS14580 PF05199 GMC oxidoreductase DMB87_RS14580 PF00732 GMC oxidoreductase DMB87_RS14595 PF03176 MMPL family DMB87_RS14610 PF12833 Helix-turn-helix domain DMB87_RS14615 PF06433 Methylamine dehydrogenase heavy chain (MADH) DMB87_RS14620 PF07291 Methylamine utilisation protein MauE DMB87_RS14625 PF00578 AhpC/TSA family DMB87_RS14630 PF02975 Methylamine dehydrogenase, L chain DMB87_RS14650 PF00970 Oxidoreductase FAD-binding domain DMB87_RS14650 PF00175 Oxidoreductase NAD-binding domain DMB87_RS14650 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS14680 PF00106 short chain dehydrogenase DMB87_RS14690 PF13609 Gram-negative porin DMB87_RS14695 PF03061 Thioesterase superfamily DMB87_RS14700 PF02515 CoA-transferase family III DMB87_RS14705 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS14705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS14705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS14710 PF00106 short chain dehydrogenase DMB87_RS14715 PF01575 MaoC like domain DMB87_RS14720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS14720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS14720 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS14725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS14725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS14725 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS14730 PF00108 Thiolase, N-terminal domain DMB87_RS14730 PF02803 Thiolase, C-terminal domain DMB87_RS14735 PF00501 AMP-binding enzyme DMB87_RS14735 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS14740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS14740 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS14740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS14745 PF02803 Thiolase, C-terminal domain DMB87_RS14745 PF00108 Thiolase, N-terminal domain DMB87_RS14750 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS14755 PF17874 MalT-like TPR region DMB87_RS14755 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS14765 PF00108 Thiolase, N-terminal domain DMB87_RS14765 PF02803 Thiolase, C-terminal domain DMB87_RS14770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMB87_RS14770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMB87_RS14770 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS14780 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS14780 PF12806 Acetyl-CoA dehydrogenase C-terminal like DMB87_RS14780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS14780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS14785 PF00501 AMP-binding enzyme DMB87_RS14790 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS14800 PF00465 Iron-containing alcohol dehydrogenase DMB87_RS14815 PF00766 Electron transfer flavoprotein FAD-binding domain DMB87_RS14815 PF01012 Electron transfer flavoprotein domain DMB87_RS14820 PF01012 Electron transfer flavoprotein domain DMB87_RS14830 PF05893 Acyl-CoA reductase (LuxC) DMB87_RS14835 PF00107 Zinc-binding dehydrogenase DMB87_RS14835 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS14845 PF14864 Alkyl sulfatase C-terminal DMB87_RS14845 PF14863 Alkyl sulfatase dimerisation DMB87_RS14845 PF00753 Metallo-beta-lactamase superfamily DMB87_RS14850 PF03466 LysR substrate binding domain DMB87_RS14850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS14875 PF00324 Amino acid permease DMB87_RS14880 PF00266 Aminotransferase class-V DMB87_RS14890 PF06052 3-hydroxyanthranilic acid dioxygenase DMB87_RS14895 PF01042 Endoribonuclease L-PSP DMB87_RS14900 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS14905 PF07836 DmpG-like communication domain DMB87_RS14905 PF00682 HMGL-like DMB87_RS14910 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation DMB87_RS14910 PF01118 Semialdehyde dehydrogenase, NAD binding domain DMB87_RS14915 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS14920 PF00171 Aldehyde dehydrogenase family DMB87_RS14925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS14925 PF03466 LysR substrate binding domain DMB87_RS14930 PF00005 ABC transporter DMB87_RS14935 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS14950 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS14960 PF00701 Dihydrodipicolinate synthetase family DMB87_RS14965 PF07859 alpha/beta hydrolase fold DMB87_RS14975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMB87_RS14975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DMB87_RS14980 PF00267 Gram-negative porin DMB87_RS15000 PF03466 LysR substrate binding domain DMB87_RS15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS15010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DMB87_RS15010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DMB87_RS15015 PF08501 Shikimate dehydrogenase substrate binding domain DMB87_RS15015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DMB87_RS15015 PF01488 Shikimate / quinate 5-dehydrogenase DMB87_RS15020 PF00083 Sugar (and other) transporter DMB87_RS15020 PF07690 Major Facilitator Superfamily DMB87_RS15040 PF02525 Flavodoxin-like fold DMB87_RS15045 PF02627 Carboxymuconolactone decarboxylase family DMB87_RS15055 PF00355 Rieske [2Fe-2S] domain DMB87_RS15065 PF00860 Permease family DMB87_RS15070 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS15075 PF03466 LysR substrate binding domain DMB87_RS15080 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMB87_RS15090 PF00355 Rieske [2Fe-2S] domain DMB87_RS15095 PF00970 Oxidoreductase FAD-binding domain DMB87_RS15095 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS15095 PF00175 Oxidoreductase NAD-binding domain DMB87_RS15100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS15100 PF03466 LysR substrate binding domain DMB87_RS15110 PF00175 Oxidoreductase NAD-binding domain DMB87_RS15110 PF00970 Oxidoreductase FAD-binding domain DMB87_RS15110 PF00042 Globin DMB87_RS15115 PF00355 Rieske [2Fe-2S] domain DMB87_RS15120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS15120 PF03466 LysR substrate binding domain DMB87_RS15125 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS15130 PF07687 Peptidase dimerisation domain DMB87_RS15130 PF01546 Peptidase family M20/M25/M40 DMB87_RS15135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS15135 PF03466 LysR substrate binding domain DMB87_RS15140 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS15145 PF02705 K+ potassium transporter DMB87_RS15150 PF00083 Sugar (and other) transporter DMB87_RS15170 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA DMB87_RS15175 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA DMB87_RS15180 PF07690 Major Facilitator Superfamily DMB87_RS15195 PF12833 Helix-turn-helix domain DMB87_RS15195 PF01965 DJ-1/PfpI family DMB87_RS15215 PF01613 Flavin reductase like domain DMB87_RS15220 PF12697 Alpha/beta hydrolase family DMB87_RS15220 PF08241 Methyltransferase domain DMB87_RS15230 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS15235 PF03466 LysR substrate binding domain DMB87_RS15235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS15240 PF04752 ChaC-like protein DMB87_RS15260 PF04545 Sigma-70, region 4 DMB87_RS15260 PF04539 Sigma-70 region 3 DMB87_RS15260 PF04542 Sigma-70 region 2 DMB87_RS15260 PF00140 Sigma-70 factor, region 1.2 DMB87_RS15260 PF03979 Sigma-70 factor, region 1.1 DMB87_RS15260 PF04546 Sigma-70, non-essential region DMB87_RS15265 PF00313 'Cold-shock' DNA-binding domain DMB87_RS15295 PF00296 Luciferase-like monooxygenase DMB87_RS15315 PF07836 DmpG-like communication domain DMB87_RS15315 PF00682 HMGL-like DMB87_RS15320 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation DMB87_RS15320 PF01118 Semialdehyde dehydrogenase, NAD binding domain DMB87_RS15325 PF01494 FAD binding domain DMB87_RS15330 PF13609 Gram-negative porin DMB87_RS15335 PF12697 Alpha/beta hydrolase family DMB87_RS15340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMB87_RS15345 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS15350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS15350 PF03466 LysR substrate binding domain DMB87_RS15355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS15355 PF03466 LysR substrate binding domain DMB87_RS15360 PF00175 Oxidoreductase NAD-binding domain DMB87_RS15360 PF00970 Oxidoreductase FAD-binding domain DMB87_RS15360 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS15365 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DMB87_RS15365 PF00355 Rieske [2Fe-2S] domain DMB87_RS15370 PF13577 SnoaL-like domain DMB87_RS15375 PF00355 Rieske [2Fe-2S] domain DMB87_RS15380 PF07883 Cupin domain DMB87_RS15385 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS15390 PF13417 Glutathione S-transferase, N-terminal domain DMB87_RS15400 PF13609 Gram-negative porin DMB87_RS15410 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DMB87_RS15420 PF01575 MaoC like domain DMB87_RS15430 PF01361 Tautomerase enzyme DMB87_RS15440 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS15445 PF00171 Aldehyde dehydrogenase family DMB87_RS15450 PF03928 Haem-degrading DMB87_RS15455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMB87_RS15460 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS15465 PF00175 Oxidoreductase NAD-binding domain DMB87_RS15465 PF00970 Oxidoreductase FAD-binding domain DMB87_RS15465 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS15470 PF04663 Phenol hydroxylase conserved region DMB87_RS15475 PF02332 Methane/Phenol/Toluene Hydroxylase DMB87_RS15475 PF04945 YHS domain DMB87_RS15485 PF02332 Methane/Phenol/Toluene Hydroxylase DMB87_RS15495 PF02830 V4R domain DMB87_RS15495 PF02954 Bacterial regulatory protein, Fis family DMB87_RS15495 PF06505 Activator of aromatic catabolism DMB87_RS15495 PF00158 Sigma-54 interaction domain DMB87_RS15505 PF13609 Gram-negative porin DMB87_RS15510 PF01613 Flavin reductase like domain DMB87_RS15520 PF14525 AraC-binding-like domain DMB87_RS15520 PF12833 Helix-turn-helix domain DMB87_RS15525 PF14525 AraC-binding-like domain DMB87_RS15525 PF12833 Helix-turn-helix domain DMB87_RS15530 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS15530 PF07729 FCD domain DMB87_RS15535 PF12697 Alpha/beta hydrolase family DMB87_RS15555 PF00107 Zinc-binding dehydrogenase DMB87_RS15555 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS15560 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS15565 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DMB87_RS15575 PF00561 alpha/beta hydrolase fold DMB87_RS15585 PF01425 Amidase DMB87_RS15590 PF01177 Asp/Glu/Hydantoin racemase DMB87_RS15600 PF00175 Oxidoreductase NAD-binding domain DMB87_RS15600 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS15600 PF00970 Oxidoreductase FAD-binding domain DMB87_RS15605 PF01425 Amidase DMB87_RS15610 PF11723 Homotrimeric ring hydroxylase DMB87_RS15610 PF00355 Rieske [2Fe-2S] domain DMB87_RS15615 PF12833 Helix-turn-helix domain DMB87_RS15625 PF07690 Major Facilitator Superfamily DMB87_RS15675 PF00582 Universal stress protein family DMB87_RS15715 PF00107 Zinc-binding dehydrogenase DMB87_RS15715 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS15715 PF13823 Alcohol dehydrogenase GroES-associated DMB87_RS15725 PF14791 DNA polymerase beta thumb DMB87_RS15725 PF14716 Helix-hairpin-helix domain DMB87_RS15725 PF02811 PHP domain DMB87_RS15735 PF00561 alpha/beta hydrolase fold DMB87_RS15735 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DMB87_RS15740 PF00871 Acetokinase family DMB87_RS15765 PF03641 Possible lysine decarboxylase DMB87_RS15770 PF02525 Flavodoxin-like fold DMB87_RS15780 PF00231 ATP synthase DMB87_RS15785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMB87_RS15785 PF00306 ATP synthase alpha/beta chain, C terminal domain DMB87_RS15790 PF00430 ATP synthase B/B' CF(0) DMB87_RS15795 PF00137 ATP synthase subunit C DMB87_RS15800 PF00119 ATP synthase A chain DMB87_RS15815 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DMB87_RS15820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DMB87_RS15820 PF02874 ATP synthase alpha/beta family, beta-barrel domain DMB87_RS15825 PF16177 Acetyl-coenzyme A synthetase N-terminus DMB87_RS15825 PF00501 AMP-binding enzyme DMB87_RS15825 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS15860 PF00501 AMP-binding enzyme DMB87_RS15860 PF14535 AMP-binding enzyme C-terminal domain DMB87_RS15865 PF00391 PEP-utilising enzyme, mobile domain DMB87_RS15865 PF02896 PEP-utilising enzyme, TIM barrel domain DMB87_RS15865 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DMB87_RS15870 PF00582 Universal stress protein family DMB87_RS15875 PF02321 Outer membrane efflux protein DMB87_RS15885 PF00005 ABC transporter DMB87_RS15900 PF00294 pfkB family carbohydrate kinase DMB87_RS15925 PF00106 short chain dehydrogenase DMB87_RS15950 PF10996 Beta-Casp domain DMB87_RS15950 PF00753 Metallo-beta-lactamase superfamily DMB87_RS15950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DMB87_RS15955 PF17200 Single Cache domain 2 DMB87_RS15955 PF07730 Histidine kinase DMB87_RS15960 PF00072 Response regulator receiver domain DMB87_RS15960 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS15965 PF00027 Cyclic nucleotide-binding domain DMB87_RS15965 PF00325 Bacterial regulatory proteins, crp family DMB87_RS15990 PF00011 Hsp20/alpha crystallin family DMB87_RS16000 PF00582 Universal stress protein family DMB87_RS16005 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS16015 PF00571 CBS domain DMB87_RS16035 PF00672 HAMP domain DMB87_RS16035 PF02203 Tar ligand binding domain homologue DMB87_RS16035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DMB87_RS16045 PF00083 Sugar (and other) transporter DMB87_RS16050 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS16050 PF03707 Bacterial signalling protein N terminal repeat DMB87_RS16050 PF00563 EAL domain DMB87_RS16060 PF00005 ABC transporter DMB87_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS16070 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS16075 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS16080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DMB87_RS16115 PF04337 Protein of unknown function, DUF480 DMB87_RS16120 PF00920 Dehydratase family DMB87_RS16130 PF03328 HpcH/HpaI aldolase/citrate lyase family DMB87_RS16135 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS16145 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DMB87_RS16150 PF00171 Aldehyde dehydrogenase family DMB87_RS16155 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS16160 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS16170 PF00155 Aminotransferase class I and II DMB87_RS16175 PF00171 Aldehyde dehydrogenase family DMB87_RS16180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMB87_RS16180 PF00205 Thiamine pyrophosphate enzyme, central domain DMB87_RS16180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMB87_RS16185 PF07690 Major Facilitator Superfamily DMB87_RS16200 PF16347 Domain of unknown function (DUF4976) DMB87_RS16200 PF00884 Sulfatase DMB87_RS16205 PF07690 Major Facilitator Superfamily DMB87_RS16210 PF13609 Gram-negative porin DMB87_RS16215 PF00171 Aldehyde dehydrogenase family DMB87_RS16220 PF07722 Peptidase C26 DMB87_RS16225 PF00970 Oxidoreductase FAD-binding domain DMB87_RS16225 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS16245 PF01522 Polysaccharide deacetylase DMB87_RS16260 PF00120 Glutamine synthetase, catalytic domain DMB87_RS16265 PF01266 FAD dependent oxidoreductase DMB87_RS16270 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS16275 PF01546 Peptidase family M20/M25/M40 DMB87_RS16275 PF07687 Peptidase dimerisation domain DMB87_RS16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS16280 PF03466 LysR substrate binding domain DMB87_RS16285 PF00171 Aldehyde dehydrogenase family DMB87_RS16295 PF12833 Helix-turn-helix domain DMB87_RS16305 PF03328 HpcH/HpaI aldolase/citrate lyase family DMB87_RS16315 PF04542 Sigma-70 region 2 DMB87_RS16315 PF08281 Sigma-70, region 4 DMB87_RS16325 PF04820 Tryptophan halogenase DMB87_RS16330 PF08241 Methyltransferase domain DMB87_RS16340 PF02801 Beta-ketoacyl synthase, C-terminal domain DMB87_RS16340 PF00109 Beta-ketoacyl synthase, N-terminal domain DMB87_RS16345 PF00109 Beta-ketoacyl synthase, N-terminal domain DMB87_RS16345 PF02801 Beta-ketoacyl synthase, C-terminal domain DMB87_RS16360 PF00109 Beta-ketoacyl synthase, N-terminal domain DMB87_RS16360 PF02801 Beta-ketoacyl synthase, C-terminal domain DMB87_RS16380 PF00221 Aromatic amino acid lyase DMB87_RS16385 PF00535 Glycosyl transferase family 2 DMB87_RS16390 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS16390 PF00501 AMP-binding enzyme DMB87_RS16400 PF00550 Phosphopantetheine attachment site DMB87_RS16425 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain DMB87_RS16425 PF13018 Extended Signal Peptide of Type V secretion system DMB87_RS16425 PF05594 Haemagluttinin repeat DMB87_RS16425 PF05860 haemagglutination activity domain DMB87_RS16425 PF13332 Hemagglutinin repeat DMB87_RS16430 PF13332 Hemagglutinin repeat DMB87_RS16430 PF12106 Colicin E5 ribonuclease domain DMB87_RS16455 PF00313 'Cold-shock' DNA-binding domain DMB87_RS16480 PF01165 Ribosomal protein S21 DMB87_RS16505 PF16884 N-terminal domain of oxidoreductase DMB87_RS16505 PF00107 Zinc-binding dehydrogenase DMB87_RS16515 PF00106 short chain dehydrogenase DMB87_RS16530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMB87_RS16530 PF00529 HlyD membrane-fusion protein of T1SS DMB87_RS16535 PF04632 Fusaric acid resistance protein family DMB87_RS16540 PF02321 Outer membrane efflux protein DMB87_RS16545 PF00463 Isocitrate lyase family DMB87_RS16560 PF03781 Sulfatase-modifying factor enzyme 1 DMB87_RS16565 PF00884 Sulfatase DMB87_RS16565 PF16385 Domain of unknown function DMB87_RS16580 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS16605 PF13614 AAA domain DMB87_RS16610 PF17762 HTH domain found in ParB protein DMB87_RS16610 PF02195 ParB-like nuclease domain DMB87_RS16615 PF01613 Flavin reductase like domain DMB87_RS16625 PF03475 3-alpha domain DMB87_RS16625 PF03473 MOSC domain DMB87_RS16635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS16635 PF03466 LysR substrate binding domain DMB87_RS16655 PF01184 GPR1/FUN34/yaaH family DMB87_RS16660 PF16177 Acetyl-coenzyme A synthetase N-terminus DMB87_RS16660 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS16660 PF00501 AMP-binding enzyme DMB87_RS16665 PF03595 Voltage-dependent anion channel DMB87_RS16680 PF08281 Sigma-70, region 4 DMB87_RS16680 PF04542 Sigma-70 region 2 DMB87_RS16685 PF06532 Negative regulator of sigma F DMB87_RS16695 PF02515 CoA-transferase family III DMB87_RS16700 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS16700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS16700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS16710 PF03466 LysR substrate binding domain DMB87_RS16710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS16725 PF00266 Aminotransferase class-V DMB87_RS16730 PF03932 CutC family DMB87_RS16745 PF03358 NADPH-dependent FMN reductase DMB87_RS16750 PF01476 LysM domain DMB87_RS16750 PF01551 Peptidase family M23 DMB87_RS16755 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS16765 PF03466 LysR substrate binding domain DMB87_RS16770 PF03104 DNA polymerase family B, exonuclease domain DMB87_RS16770 PF00136 DNA polymerase family B DMB87_RS16785 PF00171 Aldehyde dehydrogenase family DMB87_RS16800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DMB87_RS16805 PF12833 Helix-turn-helix domain DMB87_RS16815 PF02803 Thiolase, C-terminal domain DMB87_RS16815 PF00108 Thiolase, N-terminal domain DMB87_RS16820 PF00106 short chain dehydrogenase DMB87_RS16825 PF00816 H-NS histone family DMB87_RS16830 PF07715 TonB-dependent Receptor Plug Domain DMB87_RS16830 PF00593 TonB dependent receptor DMB87_RS16845 PF01546 Peptidase family M20/M25/M40 DMB87_RS16850 PF07690 Major Facilitator Superfamily DMB87_RS16855 PF03466 LysR substrate binding domain DMB87_RS16855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS16860 PF00268 Ribonucleotide reductase, small chain DMB87_RS16865 PF01494 FAD binding domain DMB87_RS16870 PF00180 Isocitrate/isopropylmalate dehydrogenase DMB87_RS16895 PF04717 Type VI secretion system, phage-baseplate injector DMB87_RS16895 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) DMB87_RS16895 PF13296 Putative type VI secretion system Rhs element Vgr DMB87_RS16970 PF00854 POT family DMB87_RS16995 PF17874 MalT-like TPR region DMB87_RS16995 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS17025 PF04717 Type VI secretion system, phage-baseplate injector DMB87_RS17030 PF00182 Chitinase class I DMB87_RS17050 PF02311 AraC-like ligand binding domain DMB87_RS17050 PF12833 Helix-turn-helix domain DMB87_RS17055 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS17055 PF00072 Response regulator receiver domain DMB87_RS17060 PF00107 Zinc-binding dehydrogenase DMB87_RS17060 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS17065 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DMB87_RS17075 PF00083 Sugar (and other) transporter DMB87_RS17080 PF13609 Gram-negative porin DMB87_RS17090 PF01568 Molydopterin dinucleotide binding domain DMB87_RS17090 PF00384 Molybdopterin oxidoreductase DMB87_RS17090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DMB87_RS17095 PF13247 4Fe-4S dicluster domain DMB87_RS17095 PF12800 4Fe-4S binding domain DMB87_RS17100 PF04976 DMSO reductase anchor subunit (DmsC) DMB87_RS17125 PF00005 ABC transporter DMB87_RS17125 PF08402 TOBE domain DMB87_RS17135 PF01427 D-ala-D-ala dipeptidase DMB87_RS17140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DMB87_RS17145 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS17150 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS17150 PF12911 N-terminal TM domain of oligopeptide transport permease C DMB87_RS17155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DMB87_RS17155 PF00005 ABC transporter DMB87_RS17160 PF00005 ABC transporter DMB87_RS17160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DMB87_RS17165 PF07690 Major Facilitator Superfamily DMB87_RS17170 PF03466 LysR substrate binding domain DMB87_RS17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS17180 PF01717 Cobalamin-independent synthase, Catalytic domain DMB87_RS17180 PF08267 Cobalamin-independent synthase, N-terminal domain DMB87_RS17185 PF01613 Flavin reductase like domain DMB87_RS17195 PF07690 Major Facilitator Superfamily DMB87_RS17205 PF07722 Peptidase C26 DMB87_RS17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS17210 PF03466 LysR substrate binding domain DMB87_RS17215 PF00005 ABC transporter DMB87_RS17220 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS17225 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS17230 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS17235 PF00202 Aminotransferase class-III DMB87_RS17245 PF03358 NADPH-dependent FMN reductase DMB87_RS17255 PF07681 DoxX DMB87_RS17260 PF17954 Quercetinase C-terminal cupin domain DMB87_RS17260 PF02678 Pirin DMB87_RS17265 PF03466 LysR substrate binding domain DMB87_RS17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS17270 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DMB87_RS17290 PF00171 Aldehyde dehydrogenase family DMB87_RS17295 PF13977 BetI-type transcriptional repressor, C-terminal DMB87_RS17295 PF00440 Bacterial regulatory proteins, tetR family DMB87_RS17300 PF13609 Gram-negative porin DMB87_RS17305 PF03313 Serine dehydratase alpha chain DMB87_RS17305 PF03315 Serine dehydratase beta chain DMB87_RS17310 PF01266 FAD dependent oxidoreductase DMB87_RS17320 PF01571 Aminomethyltransferase folate-binding domain DMB87_RS17320 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMB87_RS17320 PF08669 Glycine cleavage T-protein C-terminal barrel domain DMB87_RS17320 PF17806 Sarcosine oxidase A3 domain DMB87_RS17335 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS17335 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DMB87_RS17345 PF01965 DJ-1/PfpI family DMB87_RS17345 PF12833 Helix-turn-helix domain DMB87_RS17355 PF00464 Serine hydroxymethyltransferase DMB87_RS17370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMB87_RS17375 PF02754 Cysteine-rich domain DMB87_RS17375 PF13183 4Fe-4S dicluster domain DMB87_RS17375 PF02665 Nitrate reductase gamma subunit DMB87_RS17380 PF00766 Electron transfer flavoprotein FAD-binding domain DMB87_RS17380 PF01012 Electron transfer flavoprotein domain DMB87_RS17390 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DMB87_RS17390 PF00355 Rieske [2Fe-2S] domain DMB87_RS17395 PF00970 Oxidoreductase FAD-binding domain DMB87_RS17395 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS17395 PF00175 Oxidoreductase NAD-binding domain DMB87_RS17400 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DMB87_RS17405 PF00005 ABC transporter DMB87_RS17405 PF00571 CBS domain DMB87_RS17410 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS17415 PF01965 DJ-1/PfpI family DMB87_RS17415 PF12833 Helix-turn-helix domain DMB87_RS17420 PF01965 DJ-1/PfpI family DMB87_RS17420 PF12833 Helix-turn-helix domain DMB87_RS17430 PF00551 Formyl transferase DMB87_RS17445 PF14492 Elongation Factor G, domain II DMB87_RS17445 PF03764 Elongation factor G, domain IV DMB87_RS17445 PF00009 Elongation factor Tu GTP binding domain DMB87_RS17445 PF00679 Elongation factor G C-terminus DMB87_RS17445 PF03144 Elongation factor Tu domain 2 DMB87_RS17470 PF03330 Lytic transglycolase DMB87_RS17470 PF05036 Sporulation related domain DMB87_RS17480 PF00857 Isochorismatase family DMB87_RS17495 PF13689 YfiR/HmsC-like DMB87_RS17500 PF03707 Bacterial signalling protein N terminal repeat DMB87_RS17500 PF00563 EAL domain DMB87_RS17500 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS17505 PF00691 OmpA family DMB87_RS17510 PF01253 Translation initiation factor SUI1 DMB87_RS17535 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DMB87_RS17540 PF00510 Cytochrome c oxidase subunit III DMB87_RS17545 PF00115 Cytochrome C and Quinol oxidase polypeptide I DMB87_RS17550 PF06481 COX Aromatic Rich Motif DMB87_RS17550 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DMB87_RS17555 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS17555 PF00155 Aminotransferase class I and II DMB87_RS17560 PF02310 B12 binding domain DMB87_RS17560 PF01642 Methylmalonyl-CoA mutase DMB87_RS17575 PF00155 Aminotransferase class I and II DMB87_RS17575 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS17615 PF01624 MutS domain I DMB87_RS17615 PF05188 MutS domain II DMB87_RS17615 PF00488 MutS domain V DMB87_RS17615 PF05192 MutS domain III DMB87_RS17615 PF05190 MutS family domain IV DMB87_RS17620 PF05192 MutS domain III DMB87_RS17620 PF05190 MutS family domain IV DMB87_RS17620 PF05188 MutS domain II DMB87_RS17620 PF01624 MutS domain I DMB87_RS17620 PF00488 MutS domain V DMB87_RS17650 PF00719 Inorganic pyrophosphatase DMB87_RS17655 PF00113 Enolase, C-terminal TIM barrel domain DMB87_RS17655 PF03952 Enolase, N-terminal domain DMB87_RS17660 PF03952 Enolase, N-terminal domain DMB87_RS17660 PF00113 Enolase, C-terminal TIM barrel domain DMB87_RS17680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DMB87_RS17680 PF00361 Proton-conducting membrane transporter DMB87_RS17685 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DMB87_RS17685 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DMB87_RS17690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DMB87_RS17695 PF00361 Proton-conducting membrane transporter DMB87_RS17700 PF00654 Voltage gated chloride channel DMB87_RS17710 PF07690 Major Facilitator Superfamily DMB87_RS17715 PF00350 Dynamin family DMB87_RS17720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DMB87_RS17735 PF13609 Gram-negative porin DMB87_RS17740 PF00501 AMP-binding enzyme DMB87_RS17740 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS17750 PF01575 MaoC like domain DMB87_RS17755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS17755 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS17755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS17760 PF00072 Response regulator receiver domain DMB87_RS17760 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS17765 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS17790 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS17795 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS17800 PF00108 Thiolase, N-terminal domain DMB87_RS17800 PF02803 Thiolase, C-terminal domain DMB87_RS17805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS17805 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS17805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS17810 PF02515 CoA-transferase family III DMB87_RS17815 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS17820 PF00106 short chain dehydrogenase DMB87_RS17825 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS17825 PF00501 AMP-binding enzyme DMB87_RS17835 PF07044 Protein of unknown function (DUF1329) DMB87_RS17870 PF14864 Alkyl sulfatase C-terminal DMB87_RS17870 PF00753 Metallo-beta-lactamase superfamily DMB87_RS17870 PF14863 Alkyl sulfatase dimerisation DMB87_RS17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS17875 PF03466 LysR substrate binding domain DMB87_RS17880 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS17885 PF02525 Flavodoxin-like fold DMB87_RS17890 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS17890 PF12806 Acetyl-CoA dehydrogenase C-terminal like DMB87_RS17890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS17890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS17895 PF11737 Protein of unknown function (DUF3300) DMB87_RS17905 PF00464 Serine hydroxymethyltransferase DMB87_RS17910 PF01965 DJ-1/PfpI family DMB87_RS17925 PF00892 EamA-like transporter family DMB87_RS17930 PF00171 Aldehyde dehydrogenase family DMB87_RS17935 PF00701 Dihydrodipicolinate synthetase family DMB87_RS17940 PF00083 Sugar (and other) transporter DMB87_RS17950 PF00324 Amino acid permease DMB87_RS17960 PF00440 Bacterial regulatory proteins, tetR family DMB87_RS17965 PF00890 FAD binding domain DMB87_RS17970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DMB87_RS17975 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS17975 PF00107 Zinc-binding dehydrogenase DMB87_RS17980 PF01145 SPFH domain / Band 7 family DMB87_RS17980 PF16200 C-terminal region of band_7 DMB87_RS18000 PF08031 Berberine and berberine like DMB87_RS18000 PF01565 FAD binding domain DMB87_RS18010 PF00107 Zinc-binding dehydrogenase DMB87_RS18010 PF08240 Alcohol dehydrogenase GroES-like domain DMB87_RS18015 PF02583 Metal-sensitive transcriptional repressor DMB87_RS18025 PF12794 Mechanosensitive ion channel inner membrane domain 1 DMB87_RS18025 PF00924 Mechanosensitive ion channel DMB87_RS18025 PF12795 Mechanosensitive ion channel porin domain DMB87_RS18045 PF09339 IclR helix-turn-helix domain DMB87_RS18045 PF01614 Bacterial transcriptional regulator DMB87_RS18050 PF01494 FAD binding domain DMB87_RS18055 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DMB87_RS18060 PF01557 Fumarylacetoacetate (FAA) hydrolase family DMB87_RS18075 PF07690 Major Facilitator Superfamily DMB87_RS18080 PF12697 Alpha/beta hydrolase family DMB87_RS18095 PF08281 Sigma-70, region 4 DMB87_RS18095 PF04542 Sigma-70 region 2 DMB87_RS18110 PF12833 Helix-turn-helix domain DMB87_RS18115 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS18115 PF00072 Response regulator receiver domain DMB87_RS18135 PF00753 Metallo-beta-lactamase superfamily DMB87_RS18135 PF14864 Alkyl sulfatase C-terminal DMB87_RS18135 PF14863 Alkyl sulfatase dimerisation DMB87_RS18140 PF01145 SPFH domain / Band 7 family DMB87_RS18155 PF00403 Heavy-metal-associated domain DMB87_RS18160 PF14864 Alkyl sulfatase C-terminal DMB87_RS18160 PF00753 Metallo-beta-lactamase superfamily DMB87_RS18160 PF14863 Alkyl sulfatase dimerisation DMB87_RS18185 PF00072 Response regulator receiver domain DMB87_RS18185 PF02954 Bacterial regulatory protein, Fis family DMB87_RS18185 PF00158 Sigma-54 interaction domain DMB87_RS18190 PF00884 Sulfatase DMB87_RS18190 PF16347 Domain of unknown function (DUF4976) DMB87_RS18200 PF13186 Iron-sulfur cluster-binding domain DMB87_RS18200 PF04055 Radical SAM superfamily DMB87_RS18210 PF00501 AMP-binding enzyme DMB87_RS18210 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS18215 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS18215 PF00072 Response regulator receiver domain DMB87_RS18220 PF13493 Domain of unknown function (DUF4118) DMB87_RS18220 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS18220 PF00989 PAS fold DMB87_RS18220 PF13426 PAS domain DMB87_RS18220 PF08447 PAS fold DMB87_RS18230 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DMB87_RS18235 PF00171 Aldehyde dehydrogenase family DMB87_RS18245 PF13609 Gram-negative porin DMB87_RS18265 PF00990 Diguanylate cyclase, GGDEF domain DMB87_RS18285 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS18290 PF05552 Conserved TM helix DMB87_RS18290 PF00924 Mechanosensitive ion channel DMB87_RS18295 PF03466 LysR substrate binding domain DMB87_RS18295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS18300 PF07690 Major Facilitator Superfamily DMB87_RS18305 PF01425 Amidase DMB87_RS18315 PF07690 Major Facilitator Superfamily DMB87_RS18320 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS18320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS18320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS18325 PF02515 CoA-transferase family III DMB87_RS18330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DMB87_RS18330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DMB87_RS18335 PF02525 Flavodoxin-like fold DMB87_RS18340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS18340 PF03466 LysR substrate binding domain DMB87_RS18345 PF00171 Aldehyde dehydrogenase family DMB87_RS18350 PF00491 Arginase family DMB87_RS18365 PF01266 FAD dependent oxidoreductase DMB87_RS18370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS18370 PF03466 LysR substrate binding domain DMB87_RS18390 PF07687 Peptidase dimerisation domain DMB87_RS18390 PF01546 Peptidase family M20/M25/M40 DMB87_RS18395 PF00083 Sugar (and other) transporter DMB87_RS18395 PF07690 Major Facilitator Superfamily DMB87_RS18400 PF00596 Class II Aldolase and Adducin N-terminal domain DMB87_RS18405 PF00171 Aldehyde dehydrogenase family DMB87_RS18410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMB87_RS18410 PF00205 Thiamine pyrophosphate enzyme, central domain DMB87_RS18410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMB87_RS18420 PF03737 Aldolase/RraA DMB87_RS18425 PF00083 Sugar (and other) transporter DMB87_RS18425 PF07690 Major Facilitator Superfamily DMB87_RS18430 PF03466 LysR substrate binding domain DMB87_RS18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS18445 PF00106 short chain dehydrogenase DMB87_RS18470 PF04076 Bacterial OB fold (BOF) protein DMB87_RS18475 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS18475 PF00072 Response regulator receiver domain DMB87_RS18480 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS18480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS18485 PF01569 PAP2 superfamily DMB87_RS18490 PF00816 H-NS histone family DMB87_RS18495 PF12951 Passenger-associated-transport-repeat DMB87_RS18505 PF13609 Gram-negative porin DMB87_RS18520 PF00005 ABC transporter DMB87_RS18525 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS18530 PF08521 Two-component sensor kinase N-terminal DMB87_RS18530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS18530 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS18535 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS18535 PF00072 Response regulator receiver domain DMB87_RS18540 PF13609 Gram-negative porin DMB87_RS18545 PF00939 Sodium:sulfate symporter transmembrane region DMB87_RS18550 PF04381 Putative exonuclease, RdgC DMB87_RS18555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS18555 PF03466 LysR substrate binding domain DMB87_RS18560 PF13378 Enolase C-terminal domain-like DMB87_RS18565 PF00375 Sodium:dicarboxylate symporter family DMB87_RS18580 PF00884 Sulfatase DMB87_RS18585 PF03781 Sulfatase-modifying factor enzyme 1 DMB87_RS18590 PF07726 ATPase family associated with various cellular activities (AAA) DMB87_RS18590 PF17863 AAA lid domain DMB87_RS18610 PF07584 Aerotolerance regulator N-terminal DMB87_RS18610 PF13519 von Willebrand factor type A domain DMB87_RS18650 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DMB87_RS18655 PF00691 OmpA family DMB87_RS18655 PF13677 Membrane MotB of proton-channel complex MotA/MotB DMB87_RS18660 PF06761 Intracellular multiplication and human macrophage-killing DMB87_RS18660 PF14331 ImcF-related N-terminal domain DMB87_RS18660 PF06744 Type VI secretion protein IcmF C-terminal DMB87_RS18670 PF00069 Protein kinase domain DMB87_RS18670 PF13191 AAA ATPase domain DMB87_RS18680 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 DMB87_RS18685 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DMB87_RS18700 PF05947 Type VI secretion system, TssF DMB87_RS18710 PF06715 Gp5 C-terminal repeat (3 copies) DMB87_RS18710 PF04717 Type VI secretion system, phage-baseplate injector DMB87_RS18755 PF00529 HlyD membrane-fusion protein of T1SS DMB87_RS18755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DMB87_RS18760 PF00873 AcrB/AcrD/AcrF family DMB87_RS18765 PF02583 Metal-sensitive transcriptional repressor DMB87_RS18770 PF01545 Cation efflux family DMB87_RS18795 PF00905 Penicillin binding protein transpeptidase domain DMB87_RS18795 PF00912 Transglycosylase DMB87_RS18795 PF17092 Penicillin-binding protein OB-like domain DMB87_RS18805 PF04717 Type VI secretion system, phage-baseplate injector DMB87_RS18825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS18825 PF03466 LysR substrate binding domain DMB87_RS18830 PF13458 Periplasmic binding protein DMB87_RS18840 PF01546 Peptidase family M20/M25/M40 DMB87_RS18840 PF07687 Peptidase dimerisation domain DMB87_RS18845 PF02753 Pili assembly chaperone PapD, C-terminal domain DMB87_RS18845 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DMB87_RS18855 PF13954 PapC N-terminal domain DMB87_RS18855 PF13953 PapC C-terminal domain DMB87_RS18855 PF00577 Outer membrane usher protein DMB87_RS18860 PF02753 Pili assembly chaperone PapD, C-terminal domain DMB87_RS18860 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DMB87_RS18875 PF00355 Rieske [2Fe-2S] domain DMB87_RS18875 PF00111 2Fe-2S iron-sulfur cluster binding domain DMB87_RS18880 PF02798 Glutathione S-transferase, N-terminal domain DMB87_RS18880 PF00043 Glutathione S-transferase, C-terminal domain DMB87_RS18885 PF00860 Permease family DMB87_RS18890 PF03466 LysR substrate binding domain DMB87_RS18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS18895 PF01292 Prokaryotic cytochrome b561 DMB87_RS18910 PF03466 LysR substrate binding domain DMB87_RS18910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS18950 PF03466 LysR substrate binding domain DMB87_RS18950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS19005 PF05853 beta-keto acid cleavage enzyme DMB87_RS19050 PF01734 Patatin-like phospholipase DMB87_RS19060 PF07286 Protein of unknown function (DUF1445) DMB87_RS19065 PF07690 Major Facilitator Superfamily DMB87_RS19070 PF01968 Hydantoinase/oxoprolinase DMB87_RS19070 PF05378 Hydantoinase/oxoprolinase N-terminal region DMB87_RS19075 PF04828 Glutathione-dependent formaldehyde-activating enzyme DMB87_RS19080 PF07690 Major Facilitator Superfamily DMB87_RS19085 PF00155 Aminotransferase class I and II DMB87_RS19090 PF01063 Amino-transferase class IV DMB87_RS19095 PF01327 Polypeptide deformylase DMB87_RS19100 PF13458 Periplasmic binding protein DMB87_RS19105 PF01037 Lrp/AsnC ligand binding domain DMB87_RS19110 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS19110 PF00501 AMP-binding enzyme DMB87_RS19120 PF18158 Adaptive response protein AidB N-terminal domain DMB87_RS19120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS19120 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS19130 PF03472 Autoinducer binding domain DMB87_RS19130 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS19135 PF01494 FAD binding domain DMB87_RS19155 PF07690 Major Facilitator Superfamily DMB87_RS19165 PF13609 Gram-negative porin DMB87_RS19175 PF11737 Protein of unknown function (DUF3300) DMB87_RS19180 PF11339 Protein of unknown function (DUF3141) DMB87_RS19185 PF02627 Carboxymuconolactone decarboxylase family DMB87_RS19195 PF00155 Aminotransferase class I and II DMB87_RS19195 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS19210 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS19215 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS19230 PF00589 Phage integrase family DMB87_RS19230 PF02899 Phage integrase, N-terminal SAM-like domain DMB87_RS19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS19250 PF03466 LysR substrate binding domain DMB87_RS19255 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DMB87_RS19260 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DMB87_RS19265 PF01177 Asp/Glu/Hydantoin racemase DMB87_RS19270 PF03466 LysR substrate binding domain DMB87_RS19270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS19285 PF08207 Elongation factor P (EF-P) KOW-like domain DMB87_RS19285 PF01132 Elongation factor P (EF-P) OB domain DMB87_RS19285 PF09285 Elongation factor P, C-terminal DMB87_RS19305 PF03699 Uncharacterised protein family (UPF0182) DMB87_RS19330 PF00561 alpha/beta hydrolase fold DMB87_RS19335 PF07690 Major Facilitator Superfamily DMB87_RS19340 PF03466 LysR substrate binding domain DMB87_RS19340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS19350 PF13609 Gram-negative porin DMB87_RS19355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS19355 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS19355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS19360 PF00108 Thiolase, N-terminal domain DMB87_RS19360 PF02803 Thiolase, C-terminal domain DMB87_RS19365 PF13452 N-terminal half of MaoC dehydratase DMB87_RS19385 PF00766 Electron transfer flavoprotein FAD-binding domain DMB87_RS19385 PF01012 Electron transfer flavoprotein domain DMB87_RS19390 PF01012 Electron transfer flavoprotein domain DMB87_RS19395 PF02515 CoA-transferase family III DMB87_RS19405 PF00378 Enoyl-CoA hydratase/isomerase DMB87_RS19415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS19415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS19415 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS19420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DMB87_RS19420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DMB87_RS19420 PF02770 Acyl-CoA dehydrogenase, middle domain DMB87_RS19425 PF09339 IclR helix-turn-helix domain DMB87_RS19430 PF01614 Bacterial transcriptional regulator DMB87_RS19430 PF09339 IclR helix-turn-helix domain DMB87_RS19435 PF00196 Bacterial regulatory proteins, luxR family DMB87_RS19435 PF17874 MalT-like TPR region DMB87_RS19440 PF00501 AMP-binding enzyme DMB87_RS19440 PF13193 AMP-binding enzyme C-terminal domain DMB87_RS19450 PF00873 AcrB/AcrD/AcrF family DMB87_RS19455 PF13533 Biotin-lipoyl like DMB87_RS19460 PF02321 Outer membrane efflux protein DMB87_RS19470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DMB87_RS19470 PF00672 HAMP domain DMB87_RS19470 PF00512 His Kinase A (phospho-acceptor) domain DMB87_RS19475 PF00486 Transcriptional regulatory protein, C terminal DMB87_RS19475 PF00072 Response regulator receiver domain DMB87_RS19480 PF13411 MerR HTH family regulatory protein DMB87_RS19485 PF07992 Pyridine nucleotide-disulphide oxidoreductase DMB87_RS19485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMB87_RS19510 PF02627 Carboxymuconolactone decarboxylase family DMB87_RS19515 PF08281 Sigma-70, region 4 DMB87_RS19515 PF04542 Sigma-70 region 2 DMB87_RS19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS19520 PF03466 LysR substrate binding domain DMB87_RS19525 PF03466 LysR substrate binding domain DMB87_RS19525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS19530 PF00005 ABC transporter DMB87_RS19535 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS19540 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS19545 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS19550 PF00005 ABC transporter DMB87_RS19550 PF08402 TOBE domain DMB87_RS19560 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS19570 PF00171 Aldehyde dehydrogenase family DMB87_RS19575 PF00205 Thiamine pyrophosphate enzyme, central domain DMB87_RS19575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DMB87_RS19575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DMB87_RS19595 PF17991 Thioredoxin like C-terminal domain DMB87_RS19595 PF00578 AhpC/TSA family DMB87_RS19595 PF02683 Cytochrome C biogenesis protein transmembrane region DMB87_RS19600 PF00561 alpha/beta hydrolase fold DMB87_RS19610 PF17912 MalK OB fold domain DMB87_RS19610 PF00005 ABC transporter DMB87_RS19615 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS19620 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS19625 PF13416 Bacterial extracellular solute-binding protein DMB87_RS19650 PF13577 SnoaL-like domain DMB87_RS19670 PF07729 FCD domain DMB87_RS19670 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS19680 PF05853 beta-keto acid cleavage enzyme DMB87_RS19685 PF07690 Major Facilitator Superfamily DMB87_RS19700 PF00106 short chain dehydrogenase DMB87_RS19705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DMB87_RS19710 PF01507 Phosphoadenosine phosphosulfate reductase family DMB87_RS19715 PF00009 Elongation factor Tu GTP binding domain DMB87_RS19725 PF00266 Aminotransferase class-V DMB87_RS19730 PF07690 Major Facilitator Superfamily DMB87_RS19735 PF01425 Amidase DMB87_RS19740 PF07690 Major Facilitator Superfamily DMB87_RS19765 PF00005 ABC transporter DMB87_RS19770 PF00005 ABC transporter DMB87_RS19770 PF12399 Branched-chain amino acid ATP-binding cassette transporter DMB87_RS19775 PF11862 Domain of unknown function (DUF3382) DMB87_RS19775 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS19780 PF02653 Branched-chain amino acid transport system / permease component DMB87_RS19790 PF07729 FCD domain DMB87_RS19790 PF00392 Bacterial regulatory proteins, gntR family DMB87_RS19795 PF04717 Type VI secretion system, phage-baseplate injector DMB87_RS19830 PF00497 Bacterial extracellular solute-binding proteins, family 3 DMB87_RS19835 PF00528 Binding-protein-dependent transport system inner membrane component DMB87_RS19840 PF00005 ABC transporter DMB87_RS19855 PF05025 RbsD / FucU transport protein family DMB87_RS19860 PF07687 Peptidase dimerisation domain DMB87_RS19860 PF01546 Peptidase family M20/M25/M40 DMB87_RS19875 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DMB87_RS19875 PF00356 Bacterial regulatory proteins, lacI family DMB87_RS19880 PF00313 'Cold-shock' DNA-binding domain DMB87_RS19885 PF01176 Translation initiation factor 1A / IF-1 DMB87_RS19890 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DMB87_RS19910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DMB87_RS19910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DMB87_RS19915 PF03466 LysR substrate binding domain DMB87_RS19915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS19925 PF00480 ROK family DMB87_RS19935 PF00248 Aldo/keto reductase family DMB87_RS19940 PF03466 LysR substrate binding domain DMB87_RS19940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DMB87_RS19950 PF01546 Peptidase family M20/M25/M40 DMB87_RS19950 PF07687 Peptidase dimerisation domain DMB87_RS19955 PF03606 C4-dicarboxylate anaerobic carrier