locus-tag	class	description
DMB87_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DMB87_RS00040	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS00075	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DMB87_RS00080	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
DMB87_RS00085	COG0583	DNA-binding transcription factor activity
DMB87_RS00100	COG0758	DNA mediated transformation
DMB87_RS00105	COG0242	peptide deformylase activity
DMB87_RS00135	COG5000	phosphorelay sensor kinase activity
DMB87_RS00140	COG2204	response regulator
DMB87_RS00140	COG2204	response regulator
DMB87_RS00150	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
DMB87_RS00155	COG0602	queuosine metabolic process
DMB87_RS00180	COG0772	Belongs to the SEDS family
DMB87_RS00185	COG0768	penicillin binding
DMB87_RS00200	COG1077	Cell shape determining protein MreB Mrl
DMB87_RS00205	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DMB87_RS00210	COG0154	amidase activity
DMB87_RS00215	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DMB87_RS00220	COG2326	polyphosphate kinase activity
DMB87_RS00225	COG0708	Exodeoxyribonuclease III
DMB87_RS00235	COG2814	Major facilitator Superfamily
DMB87_RS00245	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DMB87_RS00255	COG1309	transcriptional regulator
DMB87_RS00285	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
DMB87_RS00295	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
DMB87_RS00300	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DMB87_RS00305	COG0523	cobalamin synthesis protein
DMB87_RS00310	COG5295	Hep Hag repeat protein
DMB87_RS00320	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DMB87_RS00330	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DMB87_RS00335	COG1560	Kdo2-lipid A biosynthetic process
DMB87_RS00340	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DMB87_RS00360	COG0667	Aldo Keto reductase
DMB87_RS00375	COG2814	Major facilitator Superfamily
DMB87_RS00390	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DMB87_RS00400	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DMB87_RS00420	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
DMB87_RS00455	COG0531	amino acid
DMB87_RS00465	COG3851	Histidine kinase
DMB87_RS00475	COG1280	lysine exporter protein (LysE YggA)
DMB87_RS00480	COG3568	Endonuclease Exonuclease Phosphatase
DMB87_RS00490	COG0579	oxidoreductase
DMB87_RS00520	COG2223	nitrite transmembrane transporter activity
DMB87_RS00530	COG2916	Histone family protein nucleoid-structuring protein H-NS
DMB87_RS00540	COG1522	sequence-specific DNA binding
DMB87_RS00550	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DMB87_RS00555	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DMB87_RS00565	COG0792	nuclease activity
DMB87_RS00570	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
DMB87_RS00580	COG4654	Cytochrome c, class I
DMB87_RS00600	COG0084	hydrolase, TatD family'
DMB87_RS00655	COG3846	protein secretion by the type IV secretion system
DMB87_RS00715	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
DMB87_RS00740	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DMB87_RS00780	COG3220	belongs to the UPF0276 family
DMB87_RS00795	COG2233	PERMEase
DMB87_RS00800	COG0025	NhaP-type Na H and K H
DMB87_RS00865	COG0583	DNA-binding transcription factor activity
DMB87_RS00875	COG0596	Alpha beta hydrolase
DMB87_RS00890	COG2733	membrane
DMB87_RS00920	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DMB87_RS00930	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DMB87_RS00950	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
DMB87_RS00970	COG0747	negative chemotaxis
DMB87_RS00975	COG4221	oxidoreductase activity
DMB87_RS00980	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DMB87_RS00990	COG0018	arginyl-trna synthetase
DMB87_RS01020	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DMB87_RS01045	COG1024	Enoyl-CoA hydratase
DMB87_RS01065	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
DMB87_RS01075	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
DMB87_RS01085	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DMB87_RS01090	COG1127	ABC transporter
DMB87_RS01120	COG1686	Belongs to the peptidase S11 family
DMB87_RS01130	COG2921	Belongs to the UPF0250 family
DMB87_RS01135	COG0583	DNA-binding transcription factor activity
DMB87_RS01145	COG0321	lipoyl(octanoyl) transferase activity
DMB87_RS01155	COG4521	taurine ABC transporter
DMB87_RS01160	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
DMB87_RS01165	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DMB87_RS01175	COG4191	Histidine kinase
DMB87_RS01180	COG2204	response regulator
DMB87_RS01200	COG2960	long-chain fatty acid transporting porin activity
DMB87_RS01210	COG0004	ammonium transporteR
DMB87_RS01220	COG0189	ligase activity
DMB87_RS01230	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DMB87_RS01235	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DMB87_RS01245	COG0793	Belongs to the peptidase S41A family
DMB87_RS01250	COG0588	phosphoglycerate mutase activity
DMB87_RS01255	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DMB87_RS01265	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
DMB87_RS01270	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DMB87_RS01275	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
DMB87_RS01280	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DMB87_RS01285	COG1040	competence protein
DMB87_RS01290	COG2226	methyltransferase
DMB87_RS01300	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DMB87_RS01305	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DMB87_RS01310	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
DMB87_RS01340	COG1612	heme a metabolic process
DMB87_RS01345	COG0109	protoheme IX farnesyltransferase activity
DMB87_RS01350	COG1999	signal sequence binding
DMB87_RS01360	COG2188	Transcriptional regulator
DMB87_RS01365	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DMB87_RS01370	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DMB87_RS01375	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DMB87_RS01375	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DMB87_RS01385	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DMB87_RS01395	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DMB87_RS01405	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DMB87_RS01415	COG0625	glutathione transferase activity
DMB87_RS01425	COG0742	ribosomal rna small subunit methyltransferase
DMB87_RS01435	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DMB87_RS01450	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
DMB87_RS01455	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DMB87_RS01465	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DMB87_RS01470	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
DMB87_RS01480	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DMB87_RS01485	COG1194	a g-specific adenine glycosylase
DMB87_RS01495	COG1660	Displays ATPase and GTPase activities
DMB87_RS01500	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DMB87_RS01510	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DMB87_RS01515	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DMB87_RS01520	COG1137	ATPase activity
DMB87_RS01525	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DMB87_RS01535	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DMB87_RS01550	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DMB87_RS01555	COG1280	lysine exporter protein (LysE YggA)
DMB87_RS01575	COG2223	nitrite transmembrane transporter activity
DMB87_RS01580	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DMB87_RS01585	COG1140	nitrate reductase beta subunit
DMB87_RS01590	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DMB87_RS01595	COG2181	nitrate reductase activity
DMB87_RS01600	COG3850	Histidine kinase
DMB87_RS01605	COG2197	response regulator
DMB87_RS01620	COG2814	Major facilitator Superfamily
DMB87_RS01625	COG0629	single-stranded DNA binding
DMB87_RS01630	COG1151	hydroxylamine reductase activity
DMB87_RS01635	COG0633	Ferredoxin
DMB87_RS01635	COG0543	2 iron, 2 sulfur cluster binding
DMB87_RS01645	COG0583	DNA-binding transcription factor activity
DMB87_RS01655	COG2197	response regulator
DMB87_RS01660	COG2197	response regulator
DMB87_RS01665	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DMB87_RS01670	COG0784	Response regulator, receiver
DMB87_RS01670	COG2205	protein histidine kinase activity
DMB87_RS01670	COG5002	protein histidine kinase activity
DMB87_RS01700	COG0477	Major facilitator Superfamily
DMB87_RS01720	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
DMB87_RS01740	COG1414	Transcriptional regulator
DMB87_RS01745	COG3734	2-keto-3-deoxy-galactonokinase
DMB87_RS01755	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS01765	COG1129	ABC transporter
DMB87_RS01770	COG1172	Belongs to the binding-protein-dependent transport system permease family
DMB87_RS01790	COG0284	orotidine-5'-phosphate decarboxylase activity
DMB87_RS01800	COG1058	Belongs to the CinA family
DMB87_RS01800	COG1546	Belongs to the CinA family
DMB87_RS01805	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DMB87_RS01830	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DMB87_RS01840	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DMB87_RS01845	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DMB87_RS01860	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
DMB87_RS01865	COG0735	belongs to the Fur family
DMB87_RS01870	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DMB87_RS01875	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
DMB87_RS01890	COG0495	leucyl-tRNA aminoacylation
DMB87_RS01905	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DMB87_RS01920	COG5295	Hep Hag repeat protein
DMB87_RS01925	COG0837	glucose binding
DMB87_RS01925	COG1737	Transcriptional regulator
DMB87_RS01935	COG0800	Aldolase
DMB87_RS01945	COG3265	gluconokinase activity
DMB87_RS01960	COG0583	DNA-binding transcription factor activity
DMB87_RS01965	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DMB87_RS01975	COG0765	amino acid transport
DMB87_RS01980	COG0765	amino acid transport
DMB87_RS01985	COG1126	abc transporter atp-binding protein
DMB87_RS01990	COG0121	glutamine amidotransferase
DMB87_RS02020	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DMB87_RS02025	COG0316	Belongs to the HesB IscA family
DMB87_RS02030	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
DMB87_RS02035	COG3093	addiction module antidote protein HigA
DMB87_RS02050	COG0588	phosphoglycerate mutase activity
DMB87_RS02055	COG0683	leucine binding
DMB87_RS02070	COG0632	four-way junction helicase activity
DMB87_RS02075	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
DMB87_RS02080	COG0138	bifunctional purine biosynthesis protein purh
DMB87_RS02085	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
DMB87_RS02095	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DMB87_RS02100	COG0006	proline dipeptidase activity
DMB87_RS02105	COG0625	glutathione transferase activity
DMB87_RS02110	COG0069	glutamate synthase activity
DMB87_RS02115	COG0482	sulfurtransferase activity
DMB87_RS02125	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DMB87_RS02130	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DMB87_RS02135	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DMB87_RS02170	COG3008	intermembrane lipid transfer
DMB87_RS02175	COG2995	paraquat-inducible protein a
DMB87_RS02190	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DMB87_RS02195	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DMB87_RS02200	COG1862	Preprotein translocase
DMB87_RS02205	COG0343	queuine tRNA-ribosyltransferase activity
DMB87_RS02210	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DMB87_RS02215	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DMB87_RS02225	COG0753	catalase activity
DMB87_RS02235	COG0783	Belongs to the Dps family
DMB87_RS02255	COG0247	lactate metabolic process
DMB87_RS02260	COG0277	FAD linked oxidase domain protein
DMB87_RS02265	COG0277	FAD linked oxidase domain protein
DMB87_RS02270	COG0277	FAD linked oxidase domain protein
DMB87_RS02275	COG2096	Adenosyltransferase
DMB87_RS02280	COG1017	nitric oxide dioxygenase activity
DMB87_RS02280	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DMB87_RS02285	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DMB87_RS02290	COG0312	modulator of DNA gyrase
DMB87_RS02295	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DMB87_RS02305	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
DMB87_RS02310	COG0497	DNA recombination
DMB87_RS02315	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DMB87_RS02320	COG1420	regulation of RNA biosynthetic process
DMB87_RS02335	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DMB87_RS02340	COG0443	Heat shock 70 kDa protein
DMB87_RS02345	COG0484	heat shock protein binding
DMB87_RS02350	COG0512	Glutamine amidotransferase of anthranilate synthase
DMB87_RS02350	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DMB87_RS02360	COG1428	Deoxynucleoside kinase
DMB87_RS02370	COG0617	tRNA 3'-terminal CCA addition
DMB87_RS02385	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
DMB87_RS02390	COG3483	tryptophan 2,3-dioxygenase activity
DMB87_RS02405	COG1522	sequence-specific DNA binding
DMB87_RS02410	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DMB87_RS02415	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DMB87_RS02425	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DMB87_RS02430	COG0259	pyridoxamine-phosphate oxidase activity
DMB87_RS02435	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DMB87_RS02445	COG1741	Belongs to the pirin family
DMB87_RS02455	COG0860	N-Acetylmuramoyl-L-alanine amidase
DMB87_RS02460	COG0802	atpase or kinase
DMB87_RS02465	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DMB87_RS02475	COG4974	Belongs to the 'phage' integrase family
DMB87_RS02480	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DMB87_RS02485	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DMB87_RS02490	COG0840	transmembrane signaling receptor activity
DMB87_RS02510	COG1666	GTP binding
DMB87_RS02515	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DMB87_RS02525	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
DMB87_RS02545	COG0745	RESPONSE REGULATOR receiver
DMB87_RS02555	COG0583	DNA-binding transcription factor activity
DMB87_RS02560	COG2985	domain, Protein
DMB87_RS02565	COG2985	domain, Protein
DMB87_RS02575	COG2814	Major facilitator Superfamily
DMB87_RS02585	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DMB87_RS02600	COG0583	DNA-binding transcription factor activity
DMB87_RS02615	COG2823	Periplasmic or secreted lipoprotein
DMB87_RS02625	COG0730	response to heat
DMB87_RS02640	COG0730	response to heat
DMB87_RS02645	COG0446	pyridine nucleotide-disulphide oxidoreductase
DMB87_RS02660	COG0640	Transcriptional regulator
DMB87_RS02670	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DMB87_RS02675	COG0604	alcohol dehydrogenase
DMB87_RS02705	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DMB87_RS02710	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DMB87_RS02715	COG1215	transferase activity, transferring glycosyl groups
DMB87_RS02750	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DMB87_RS02760	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DMB87_RS02785	COG0489	protein tyrosine kinase activity
DMB87_RS02785	COG3206	protein involved in exopolysaccharide biosynthesis
DMB87_RS02790	COG1215	transferase activity, transferring glycosyl groups
DMB87_RS02825	COG0859	PFAM glycosyl transferase family 9
DMB87_RS02830	COG1696	Membrane protein involved in D-alanine export
DMB87_RS02855	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DMB87_RS02870	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DMB87_RS02890	COG1773	rubredoxin
DMB87_RS02900	COG1678	Uncharacterized ACR, COG1678
DMB87_RS02905	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DMB87_RS02910	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DMB87_RS02920	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DMB87_RS02930	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DMB87_RS02960	COG0438	transferase activity, transferring glycosyl groups
DMB87_RS02980	COG0438	transferase activity, transferring glycosyl groups
DMB87_RS02990	COG0297	glycogen (starch) synthase activity
DMB87_RS03000	COG3436	PFAM IS66 Orf2 family protein
DMB87_RS03005	COG4372	Transposase
DMB87_RS03040	COG0662	Cupin 2, conserved barrel domain protein
DMB87_RS03040	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
DMB87_RS03075	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DMB87_RS03085	COG0529	Catalyzes the synthesis of activated sulfate
DMB87_RS03090	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DMB87_RS03105	COG1346	cytolysis
DMB87_RS03170	COG2990	Protein conserved in bacteria
DMB87_RS03175	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS03215	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
DMB87_RS03220	COG0830	nickel cation binding
DMB87_RS03230	COG0804	urea catabolic process
DMB87_RS03235	COG0832	Belongs to the urease beta subunit family
DMB87_RS03240	COG0831	urea catabolic process
DMB87_RS03255	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DMB87_RS03260	COG3077	Addiction module antitoxin, RelB DinJ family
DMB87_RS03270	COG0583	DNA-binding transcription factor activity
DMB87_RS03275	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DMB87_RS03285	COG0175	sulfate reduction
DMB87_RS03295	COG2895	sulfate adenylyltransferase (ATP) activity
DMB87_RS03300	COG1648	precorrin-2 dehydrogenase activity
DMB87_RS03300	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DMB87_RS03315	COG0795	lipopolysaccharide-transporting ATPase activity
DMB87_RS03320	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DMB87_RS03345	COG0583	DNA-binding transcription factor activity
DMB87_RS03350	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DMB87_RS03380	COG4139	cobalamin transport
DMB87_RS03385	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
DMB87_RS03390	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
DMB87_RS03395	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
DMB87_RS03405	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DMB87_RS03425	COG1492	cobalamin metabolic process
DMB87_RS03450	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
DMB87_RS03480	COG3047	cAMP biosynthetic process
DMB87_RS03480	COG2885	chlorophyll binding
DMB87_RS03485	COG0489	protein tyrosine kinase activity
DMB87_RS03495	COG0717	Belongs to the dCTP deaminase family
DMB87_RS03500	COG1982	Orn Lys Arg decarboxylase major
DMB87_RS03510	COG3781	membrane
DMB87_RS03515	COG0165	Argininosuccinate lyase
DMB87_RS03530	COG2226	methyltransferase
DMB87_RS03550	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DMB87_RS03555	COG0181	hydroxymethylbilane synthase activity
DMB87_RS03570	COG2271	Major facilitator Superfamily
DMB87_RS03585	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DMB87_RS03610	COG3328	transposase activity
DMB87_RS03625	COG5002	protein histidine kinase activity
DMB87_RS03625	COG5001	Diguanylate cyclase
DMB87_RS03630	COG2827	Endonuclease containing a URI domain
DMB87_RS03660	COG4160	amino acid transport
DMB87_RS03665	COG4215	(ABC) transporter
DMB87_RS03680	COG0745	RESPONSE REGULATOR receiver
DMB87_RS03685	COG2205	protein histidine kinase activity
DMB87_RS03695	COG3706	GGDEF domain
DMB87_RS03700	COG1176	ABC-type spermidine putrescine transport system, permease component I
DMB87_RS03705	COG1116	anion transmembrane transporter activity
DMB87_RS03720	COG2204	response regulator
DMB87_RS03730	COG2204	response regulator
DMB87_RS03745	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
DMB87_RS03755	COG2814	Major facilitator Superfamily
DMB87_RS03760	COG1881	PFAM PEBP family protein
DMB87_RS03765	COG3727	T/G mismatch-specific endonuclease activity
DMB87_RS03790	COG1773	rubredoxin
DMB87_RS03820	COG0583	DNA-binding transcription factor activity
DMB87_RS03825	COG0477	Major facilitator Superfamily
DMB87_RS03845	COG0384	phenazine biosynthesis protein PhzF
DMB87_RS03855	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DMB87_RS03860	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DMB87_RS03870	COG3161	chorismate lyase activity
DMB87_RS03910	COG2764	glyoxalase bleomycin resistance protein dioxygenase
DMB87_RS03920	COG3135	benzoate transporter
DMB87_RS03930	COG0542	response to heat
DMB87_RS03950	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DMB87_RS03955	COG2878	Part of a membrane complex involved in electron transport
DMB87_RS03960	COG1309	transcriptional regulator
DMB87_RS03970	COG3387	PFAM Glycoside hydrolase 15-related
DMB87_RS03980	COG2706	6-phosphogluconolactonase activity
DMB87_RS03985	COG1674	ftsk spoiiie
DMB87_RS03985	COG1674	ftsk spoiiie
DMB87_RS03995	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DMB87_RS04010	COG0513	Belongs to the DEAD box helicase family
DMB87_RS04015	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DMB87_RS04050	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
DMB87_RS04055	COG1530	ribonuclease E activity
DMB87_RS04065	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DMB87_RS04070	COG0799	negative regulation of ribosome biogenesis
DMB87_RS04080	COG0408	coproporphyrinogen oxidase activity
DMB87_RS04085	COG0151	Belongs to the GarS family
DMB87_RS04090	COG0217	transcriptional regulatory protein
DMB87_RS04100	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS04125	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
DMB87_RS04130	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
DMB87_RS04135	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
DMB87_RS04140	COG2205	protein histidine kinase activity
DMB87_RS04145	COG0745	RESPONSE REGULATOR receiver
DMB87_RS04150	COG2076	Multidrug Resistance protein
DMB87_RS04180	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
DMB87_RS04185	COG4638	Rieske (2fe-2S)
DMB87_RS04210	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DMB87_RS04220	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS04230	COG1309	transcriptional regulator
DMB87_RS04235	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DMB87_RS04240	COG0438	transferase activity, transferring glycosyl groups
DMB87_RS04270	COG0028	Belongs to the TPP enzyme family
DMB87_RS04280	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DMB87_RS04285	COG0688	phosphatidylethanolamine metabolic process
DMB87_RS04290	COG1183	phosphatidylcholine synthase activity
DMB87_RS04295	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DMB87_RS04315	COG1185	polyribonucleotide nucleotidyltransferase activity
DMB87_RS04325	COG0149	triose-phosphate isomerase activity
DMB87_RS04340	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DMB87_RS04355	COG0649	NAD binding
DMB87_RS04370	COG1034	ATP synthesis coupled electron transport
DMB87_RS04375	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
DMB87_RS04380	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DMB87_RS04385	COG0839	Belongs to the complex I subunit 6 family
DMB87_RS04390	COG0713	ATP synthesis coupled electron transport
DMB87_RS04405	COG1007	ATP synthesis coupled electron transport
DMB87_RS04425	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS04430	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS04445	COG0625	glutathione transferase activity
DMB87_RS04450	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS04460	COG1024	Enoyl-CoA hydratase
DMB87_RS04465	COG1250	3-hydroxyacyl-CoA dehydrogenase
DMB87_RS04475	COG0436	Aminotransferase
DMB87_RS04485	COG3022	response to hydroperoxide
DMB87_RS04490	COG2866	Carboxypeptidase
DMB87_RS04540	COG0534	Mate efflux family protein
DMB87_RS04550	COG4942	peptidase
DMB87_RS04565	COG1968	undecaprenyl-diphosphatase activity
DMB87_RS04580	COG1858	cytochrome C peroxidase
DMB87_RS04595	COG1051	belongs to the nudix hydrolase family
DMB87_RS04600	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DMB87_RS04610	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DMB87_RS04625	COG0477	Major facilitator Superfamily
DMB87_RS04635	COG0824	Thioesterase
DMB87_RS04640	COG0559	Belongs to the binding-protein-dependent transport system permease family
DMB87_RS04650	COG0411	ABC transporter
DMB87_RS04670	COG2223	nitrite transmembrane transporter activity
DMB87_RS04720	COG3501	Rhs element vgr protein
DMB87_RS04725	COG3501	Rhs element vgr protein
DMB87_RS04765	COG0840	transmembrane signaling receptor activity
DMB87_RS04770	COG3718	enzyme involved in inositol metabolism
DMB87_RS04780	COG3962	Belongs to the TPP enzyme family
DMB87_RS04785	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DMB87_RS04790	COG1129	ABC transporter
DMB87_RS04795	COG1172	Belongs to the binding-protein-dependent transport system permease family
DMB87_RS04810	COG0673	inositol 2-dehydrogenase activity
DMB87_RS04815	COG0673	inositol 2-dehydrogenase activity
DMB87_RS04820	COG0425	Belongs to the sulfur carrier protein TusA family
DMB87_RS04825	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DMB87_RS04830	COG0525	valine-tRNA ligase activity
DMB87_RS04840	COG0210	DNA helicase
DMB87_RS04845	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DMB87_RS04855	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DMB87_RS04865	COG1566	PFAM secretion protein HlyD family protein
DMB87_RS04885	COG0583	DNA-binding transcription factor activity
DMB87_RS04895	COG0277	FAD linked oxidase domain protein
DMB87_RS04910	COG1295	ribonuclease BN
DMB87_RS04935	COG0477	Major facilitator Superfamily
DMB87_RS04950	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS04980	COG0251	oxidation-reduction process
DMB87_RS04985	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DMB87_RS04995	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DMB87_RS05000	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DMB87_RS05025	COG0776	regulation of translation
DMB87_RS05055	COG1250	3-hydroxyacyl-CoA dehydrogenase
DMB87_RS05060	COG2017	converts alpha-aldose to the beta-anomer
DMB87_RS05090	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
DMB87_RS05095	COG1620	l-lactate permease
DMB87_RS05110	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
DMB87_RS05130	COG2814	Major facilitator Superfamily
DMB87_RS05150	COG0625	glutathione transferase activity
DMB87_RS05160	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DMB87_RS05185	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DMB87_RS05185	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DMB87_RS05190	COG1643	Atp-dependent helicase
DMB87_RS05210	COG1546	Belongs to the CinA family
DMB87_RS05210	COG1058	Belongs to the CinA family
DMB87_RS05225	COG3852	Histidine kinase
DMB87_RS05235	COG1505	serine-type exopeptidase activity
DMB87_RS05300	COG3328	transposase activity
DMB87_RS05350	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DMB87_RS05355	COG0402	S-adenosylhomocysteine deaminase activity
DMB87_RS05360	COG0339	signal peptide processing
DMB87_RS05365	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DMB87_RS05370	COG4566	intracellular signal transduction
DMB87_RS05380	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
DMB87_RS05385	COG0508	dehydrogenase complex catalyzes the overall conversion of
DMB87_RS05390	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DMB87_RS05415	COG1414	Transcriptional regulator
DMB87_RS05425	COG1139	Iron-sulfur cluster binding protein
DMB87_RS05435	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DMB87_RS05445	COG1104	cysteine desulfurase activity
DMB87_RS05450	COG0822	iron-sulfur transferase activity
DMB87_RS05460	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
DMB87_RS05475	COG2975	iron-sulfur cluster assembly
DMB87_RS05485	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
DMB87_RS05495	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DMB87_RS05510	COG1136	(ABC) transporter
DMB87_RS05515	COG0084	hydrolase, TatD family'
DMB87_RS05530	COG0504	CTP synthase activity
DMB87_RS05535	COG2877	3-deoxy-8-phosphooctulonate synthase activity
DMB87_RS05555	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DMB87_RS05565	COG2833	Protein of unknown function (DUF455)
DMB87_RS05570	COG0596	Alpha beta hydrolase
DMB87_RS05575	COG0613	PHP domain protein
DMB87_RS05580	COG0009	L-threonylcarbamoyladenylate synthase
DMB87_RS05585	COG1994	Peptidase M50
DMB87_RS05590	COG0180	Tryptophanyl-tRNA synthetase
DMB87_RS05600	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DMB87_RS05605	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
DMB87_RS05615	COG0670	Belongs to the BI1 family
DMB87_RS05625	COG0820	rRNA (adenine-C2-)-methyltransferase activity
DMB87_RS05635	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
DMB87_RS05640	COG0124	histidyl-tRNA synthetase
DMB87_RS05650	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DMB87_RS05665	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DMB87_RS05670	COG0330	HflC and HflK could
DMB87_RS05680	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
DMB87_RS05685	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
DMB87_RS05690	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DMB87_RS05695	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
DMB87_RS05700	COG3158	transport of potassium into the cell
DMB87_RS05705	COG2183	response to ionizing radiation
DMB87_RS05720	COG1199	ATP-dependent helicase activity
DMB87_RS05735	COG2850	peptidyl-arginine hydroxylation
DMB87_RS05750	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DMB87_RS05755	COG0477	Major facilitator Superfamily
DMB87_RS05770	COG1045	serine acetyltransferase
DMB87_RS05775	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DMB87_RS05780	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DMB87_RS05785	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DMB87_RS05795	COG0215	cysteine-tRNA ligase activity
DMB87_RS05800	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DMB87_RS05805	COG0825	malonyl-CoA metabolic process
DMB87_RS05810	COG0037	tRNA processing
DMB87_RS05815	COG0527	aspartate kinase activity
DMB87_RS05835	COG4166	transmembrane transport
DMB87_RS05840	COG4174	ABC transporter (Permease)
DMB87_RS05850	COG4172	Belongs to the ABC transporter superfamily
DMB87_RS05855	COG0791	NLP P60 protein
DMB87_RS05860	COG1752	Esterase of the alpha-beta hydrolase superfamily
DMB87_RS05865	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DMB87_RS05920	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DMB87_RS05930	COG0583	DNA-binding transcription factor activity
DMB87_RS05940	COG2224	Isocitrate lyase
DMB87_RS05945	COG0513	Belongs to the DEAD box helicase family
DMB87_RS05955	COG1214	PFAM Peptidase M22, glycoprotease
DMB87_RS05965	COG1573	uracil-dna glycosylase
DMB87_RS05975	COG0351	phosphomethylpyrimidine kinase
DMB87_RS05985	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DMB87_RS06000	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DMB87_RS06005	COG0488	(ABC) transporter
DMB87_RS06010	COG0386	Belongs to the glutathione peroxidase family
DMB87_RS06020	COG2890	protein-(glutamine-N5) methyltransferase activity
DMB87_RS06030	COG1393	Belongs to the ArsC family
DMB87_RS06035	COG2171	N-acyltransferase activity
DMB87_RS06060	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DMB87_RS06065	COG0242	peptide deformylase activity
DMB87_RS06070	COG1187	pseudouridine synthase activity
DMB87_RS06080	COG0024	Methionine aminopeptidase
DMB87_RS06085	COG0052	Belongs to the universal ribosomal protein uS2 family
DMB87_RS06090	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DMB87_RS06095	COG0528	UMP kinase activity
DMB87_RS06100	COG0233	cytoplasmic translational termination
DMB87_RS06105	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DMB87_RS06115	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DMB87_RS06120	COG0750	zinc metalloprotease
DMB87_RS06135	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DMB87_RS06140	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DMB87_RS06150	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DMB87_RS06160	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DMB87_RS06180	COG0330	HflC and HflK could
DMB87_RS06190	COG2867	negative regulation of translational initiation
DMB87_RS06195	COG2914	Belongs to the UPF0125 (RnfH) family
DMB87_RS06200	COG0697	spore germination
DMB87_RS06215	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DMB87_RS06215	COG0519	Catalyzes the synthesis of GMP from XMP
DMB87_RS06220	COG0346	lactoylglutathione lyase activity
DMB87_RS06225	COG4942	peptidase
DMB87_RS06250	COG1522	sequence-specific DNA binding
DMB87_RS06275	COG0590	tRNA wobble adenosine to inosine editing
DMB87_RS06280	COG1619	proteins homologs of microcin C7 resistance protein MccF
DMB87_RS06285	COG1802	Transcriptional regulator
DMB87_RS06290	COG1953	Uracil, thiamine, allantoin
DMB87_RS06345	COG2351	hydroxyisourate hydrolase activity
DMB87_RS06365	COG1129	ABC transporter
DMB87_RS06385	COG3360	Dodecin
DMB87_RS06390	COG2084	Dehydrogenase
DMB87_RS06395	COG0488	(ABC) transporter
DMB87_RS06410	COG2070	2-Nitropropane dioxygenase
DMB87_RS06415	COG3047	cAMP biosynthetic process
DMB87_RS06430	COG3842	ATPase activity
DMB87_RS06435	COG1176	ABC-type spermidine putrescine transport system, permease component I
DMB87_RS06440	COG1177	transmembrane transport
DMB87_RS06480	COG1538	Outer membrane efflux protein
DMB87_RS06485	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DMB87_RS06510	COG0038	chloride channel
DMB87_RS06520	COG2855	membrane
DMB87_RS06535	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DMB87_RS06545	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DMB87_RS06550	COG1609	Transcriptional regulator
DMB87_RS06595	COG0598	Magnesium transport protein CorA
DMB87_RS06600	COG1879	ABC-type sugar transport system periplasmic component
DMB87_RS06610	COG1172	Belongs to the binding-protein-dependent transport system permease family
DMB87_RS06615	COG1609	Transcriptional regulator
DMB87_RS06620	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DMB87_RS06625	COG0840	transmembrane signaling receptor activity
DMB87_RS06640	COG2766	serine protein kinase
DMB87_RS06645	COG2718	Belongs to the UPF0229 family
DMB87_RS06650	COG2719	SpoVR family
DMB87_RS06660	COG2723	6-phospho-beta-galactosidase activity
DMB87_RS06670	COG1175	transmembrane transport
DMB87_RS06680	COG3842	ATPase activity
DMB87_RS06685	COG1609	Transcriptional regulator
DMB87_RS06690	COG1858	cytochrome C peroxidase
DMB87_RS06705	COG2801	Transposase and inactivated derivatives
DMB87_RS06715	COG0642	Histidine kinase
DMB87_RS06720	COG0745	RESPONSE REGULATOR receiver
DMB87_RS06740	COG2175	clavaminate synthase activity
DMB87_RS06760	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS06765	COG0318	PFAM AMP-dependent synthetase and ligase
DMB87_RS06775	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS06795	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS06800	COG0183	Belongs to the thiolase family
DMB87_RS06805	COG2030	dehydratase
DMB87_RS06815	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS06830	COG1742	UPF0060 membrane protein
DMB87_RS06835	COG0252	asparaginase activity
DMB87_RS06840	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DMB87_RS06845	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DMB87_RS06885	COG0438	transferase activity, transferring glycosyl groups
DMB87_RS06890	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DMB87_RS06895	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
DMB87_RS06910	COG0084	hydrolase, TatD family'
DMB87_RS06915	COG1247	-acetyltransferase
DMB87_RS06925	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DMB87_RS06930	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DMB87_RS06935	COG0354	folic acid binding
DMB87_RS06955	COG2130	NADP-dependent
DMB87_RS06970	COG0183	Belongs to the thiolase family
DMB87_RS06975	COG1335	isochorismatase
DMB87_RS06980	COG1250	3-hydroxyacyl-CoA dehydrogenase
DMB87_RS06980	COG1024	Enoyl-CoA hydratase
DMB87_RS06985	COG0318	PFAM AMP-dependent synthetase and ligase
DMB87_RS06990	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
DMB87_RS06995	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DMB87_RS07000	COG2917	probably involved in intracellular septation
DMB87_RS07010	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DMB87_RS07015	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DMB87_RS07015	COG0047	phosphoribosylformylglycinamidine synthase activity
DMB87_RS07025	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DMB87_RS07025	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DMB87_RS07030	COG0166	Belongs to the GPI family
DMB87_RS07035	COG4181	ATPase activity
DMB87_RS07065	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DMB87_RS07070	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DMB87_RS07075	COG0740	serine-type endopeptidase activity
DMB87_RS07080	COG0544	peptidyl-prolyl cis-trans isomerase activity
DMB87_RS07085	COG1929	Belongs to the glycerate kinase type-1 family
DMB87_RS07090	COG1846	Transcriptional regulator
DMB87_RS07120	COG0745	RESPONSE REGULATOR receiver
DMB87_RS07125	COG2205	protein histidine kinase activity
DMB87_RS07130	COG0450	alkyl hydroperoxide reductase
DMB87_RS07135	COG2755	lipolytic protein G-D-S-L family
DMB87_RS07135	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DMB87_RS07140	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
DMB87_RS07145	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
DMB87_RS07150	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DMB87_RS07165	COG1970	mechanosensitive ion channel activity
DMB87_RS07180	COG4251	negative regulation of phosphorylation
DMB87_RS07190	COG2982	Protein involved in outer membrane biogenesis
DMB87_RS07195	COG1122	ATPase activity
DMB87_RS07200	COG0390	transport system, permease component
DMB87_RS07215	COG0560	Phosphoserine phosphatase
DMB87_RS07220	COG0626	cystathionine gamma-synthase activity
DMB87_RS07230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DMB87_RS07235	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DMB87_RS07250	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS07255	COG0183	Belongs to the thiolase family
DMB87_RS07260	COG3243	poly(R)-hydroxyalkanoic acid synthase
DMB87_RS07270	COG0564	pseudouridine synthase activity
DMB87_RS07315	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DMB87_RS07320	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
DMB87_RS07330	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DMB87_RS07335	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DMB87_RS07340	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DMB87_RS07345	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DMB87_RS07360	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DMB87_RS07365	COG0789	Transcriptional regulator
DMB87_RS07380	COG0254	rRNA binding
DMB87_RS07390	COG0534	Mate efflux family protein
DMB87_RS07395	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DMB87_RS07405	COG0022	dehydrogenase e1 component
DMB87_RS07410	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DMB87_RS07415	COG3199	ATP-NAD kinase
DMB87_RS07420	COG3284	Transcriptional regulator
DMB87_RS07430	COG3753	Protein conserved in bacteria
DMB87_RS07435	COG0542	response to heat
DMB87_RS07440	COG1959	2 iron, 2 sulfur cluster binding
DMB87_RS07445	COG2346	COG2346, Truncated hemoglobins
DMB87_RS07450	COG3550	peptidyl-serine autophosphorylation
DMB87_RS07460	COG0314	molybdopterin synthase activity
DMB87_RS07465	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DMB87_RS07485	COG0436	Aminotransferase
DMB87_RS07500	COG2076	Multidrug Resistance protein
DMB87_RS07505	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DMB87_RS07525	COG0726	polysaccharide deacetylase
DMB87_RS07530	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DMB87_RS07535	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DMB87_RS07540	COG0791	NLP P60 protein
DMB87_RS07545	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS07550	COG0306	phosphate transporter
DMB87_RS07560	COG0305	Participates in initiation and elongation during chromosome replication
DMB87_RS07565	COG0359	binds to the 23S rRNA
DMB87_RS07570	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DMB87_RS07590	COG1595	DNA-templated transcription, initiation
DMB87_RS07595	COG0583	DNA-binding transcription factor activity
DMB87_RS07600	COG3960	tartronate-semialdehyde synthase activity
DMB87_RS07605	COG3622	Belongs to the hyi family
DMB87_RS07610	COG2084	Dehydrogenase
DMB87_RS07615	COG1652	LysM domain
DMB87_RS07620	COG0252	asparaginase activity
DMB87_RS07625	COG0583	DNA-binding transcription factor activity
DMB87_RS07630	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DMB87_RS07635	COG4208	sulfate ABC transporter
DMB87_RS07640	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
DMB87_RS07645	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DMB87_RS07650	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DMB87_RS07665	COG1131	(ABC) transporter
DMB87_RS07680	COG0701	Predicted permease
DMB87_RS07685	COG0667	Aldo Keto reductase
DMB87_RS07695	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DMB87_RS07720	COG1116	anion transmembrane transporter activity
DMB87_RS07725	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DMB87_RS07730	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DMB87_RS07785	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
DMB87_RS07790	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
DMB87_RS07810	COG0673	inositol 2-dehydrogenase activity
DMB87_RS07830	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DMB87_RS07835	COG3023	N-Acetylmuramoyl-L-alanine amidase
DMB87_RS07840	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DMB87_RS07845	COG0557	exoribonuclease II activity
DMB87_RS07875	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DMB87_RS07880	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DMB87_RS07890	COG5002	protein histidine kinase activity
DMB87_RS07890	COG3447	MASE1 domain protein
DMB87_RS07890	COG5001	Diguanylate cyclase
DMB87_RS07905	COG1802	Transcriptional regulator
DMB87_RS07915	COG0318	PFAM AMP-dependent synthetase and ligase
DMB87_RS07930	COG2814	Major facilitator Superfamily
DMB87_RS07935	COG0318	PFAM AMP-dependent synthetase and ligase
DMB87_RS07960	COG1923	regulation of RNA biosynthetic process
DMB87_RS07995	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DMB87_RS08000	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DMB87_RS08005	COG0508	dehydrogenase complex catalyzes the overall conversion of
DMB87_RS08010	COG0567	Dehydrogenase, E1 component
DMB87_RS08025	COG1538	Outer membrane efflux protein
DMB87_RS08030	COG1566	PFAM secretion protein HlyD family protein
DMB87_RS08035	COG2814	Major facilitator Superfamily
DMB87_RS08045	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DMB87_RS08055	COG2251	uridine kinase activity
DMB87_RS08055	COG0195	Participates in both transcription termination and antitermination
DMB87_RS08060	COG0779	Required for maturation of 30S ribosomal subunits
DMB87_RS08065	COG1187	pseudouridine synthase activity
DMB87_RS08070	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DMB87_RS08075	COG0436	Aminotransferase
DMB87_RS08080	COG0583	DNA-binding transcription factor activity
DMB87_RS08100	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DMB87_RS08115	COG2199	diguanylate cyclase activity
DMB87_RS08115	COG2200	EAL domain
DMB87_RS08140	COG1522	sequence-specific DNA binding
DMB87_RS08150	COG0668	transmembrane transport
DMB87_RS08155	COG2910	NAD(P)H-binding
DMB87_RS08160	COG1959	2 iron, 2 sulfur cluster binding
DMB87_RS08170	COG0454	-acetyltransferase
DMB87_RS08185	COG4251	negative regulation of phosphorylation
DMB87_RS08190	COG0004	ammonium transporteR
DMB87_RS08205	COG3088	subunit of a heme lyase
DMB87_RS08210	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DMB87_RS08220	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
DMB87_RS08230	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DMB87_RS08235	COG4133	protoheme IX ABC transporter activity
DMB87_RS08240	COG3005	denitrification pathway
DMB87_RS08245	COG3043	anaerobic respiration
DMB87_RS08250	COG0243	molybdopterin cofactor binding
DMB87_RS08265	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DMB87_RS08270	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DMB87_RS08275	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DMB87_RS08305	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
DMB87_RS08335	COG3724	N-succinylarginine dihydrolase activity
DMB87_RS08340	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS08355	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DMB87_RS08365	COG4598	ABC transporter
DMB87_RS08370	COG4160	amino acid transport
DMB87_RS08375	COG4215	(ABC) transporter
DMB87_RS08380	COG1752	Esterase of the alpha-beta hydrolase superfamily
DMB87_RS08395	COG3394	polysaccharide catabolic process
DMB87_RS08410	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DMB87_RS08415	COG2267	carboxylic ester hydrolase activity
DMB87_RS08420	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DMB87_RS08430	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
DMB87_RS08455	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DMB87_RS08475	COG2986	histidine ammonia-lyase
DMB87_RS08480	COG0583	DNA-binding transcription factor activity
DMB87_RS08510	COG2252	PERMEase
DMB87_RS08550	COG1215	transferase activity, transferring glycosyl groups
DMB87_RS08560	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DMB87_RS08580	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
DMB87_RS08590	COG0583	DNA-binding transcription factor activity
DMB87_RS08635	COG1139	Iron-sulfur cluster binding protein
DMB87_RS08640	COG0247	lactate metabolic process
DMB87_RS08675	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DMB87_RS08680	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DMB87_RS08755	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DMB87_RS08760	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DMB87_RS08765	COG0798	PFAM Bile acid sodium symporter
DMB87_RS08775	COG0431	NADPH-dependent FMN reductase
DMB87_RS08785	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DMB87_RS08805	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DMB87_RS08815	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DMB87_RS08840	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DMB87_RS08890	COG3193	protein, possibly involved in utilization of glycolate and propanediol
DMB87_RS08905	COG4633	Protein conserved in bacteria
DMB87_RS08915	COG0556	nucleotide-excision repair
DMB87_RS08930	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS08935	COG0667	Aldo Keto reductase
DMB87_RS08940	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DMB87_RS08950	COG0789	Transcriptional regulator
DMB87_RS08965	COG0587	DNA-directed DNA polymerase activity
DMB87_RS08980	COG2197	response regulator
DMB87_RS09005	COG3501	Rhs element vgr protein
DMB87_RS09015	COG0210	DNA helicase
DMB87_RS09035	COG3328	transposase activity
DMB87_RS09045	COG2062	phosphohistidine phosphatase, SixA
DMB87_RS09060	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DMB87_RS09070	COG0745	RESPONSE REGULATOR receiver
DMB87_RS09080	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DMB87_RS09085	COG0581	inorganic phosphate transmembrane transporter activity
DMB87_RS09090	COG0573	inorganic phosphate transmembrane transporter activity
DMB87_RS09095	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DMB87_RS09100	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DMB87_RS09105	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DMB87_RS09110	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DMB87_RS09120	COG1534	Rna-binding protein
DMB87_RS09130	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DMB87_RS09135	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DMB87_RS09140	COG0505	Belongs to the CarA family
DMB87_RS09145	COG0741	lytic transglycosylase activity
DMB87_RS09145	COG1388	LysM domain
DMB87_RS09150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DMB87_RS09155	COG2226	methyltransferase
DMB87_RS09160	COG0328	RNA-DNA hybrid ribonuclease activity
DMB87_RS09165	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DMB87_RS09185	COG0438	transferase activity, transferring glycosyl groups
DMB87_RS09190	COG1132	(ABC) transporter
DMB87_RS09195	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
DMB87_RS09220	COG2153	protein acetylation
DMB87_RS09245	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DMB87_RS09250	COG0322	excinuclease ABC activity
DMB87_RS09260	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DMB87_RS09275	COG1472	Belongs to the glycosyl hydrolase 3 family
DMB87_RS09285	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
DMB87_RS09290	COG1381	Involved in DNA repair and RecF pathway recombination
DMB87_RS09295	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DMB87_RS09300	COG0571	ribonuclease III activity
DMB87_RS09305	COG0681	Belongs to the peptidase S26 family
DMB87_RS09320	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DMB87_RS09345	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DMB87_RS09365	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DMB87_RS09370	COG0416	fatty acid biosynthetic process
DMB87_RS09380	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DMB87_RS09385	COG1399	metal-binding, possibly nucleic acid-binding protein
DMB87_RS09390	COG0424	maF-like protein
DMB87_RS09400	COG0616	signal peptide processing
DMB87_RS09400	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DMB87_RS09410	COG0546	phosphoglycolate phosphatase activity
DMB87_RS09420	COG1530	ribonuclease E activity
DMB87_RS09425	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DMB87_RS09455	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DMB87_RS09480	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
DMB87_RS09495	COG3045	CreA protein
DMB87_RS09505	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DMB87_RS09530	COG0534	Mate efflux family protein
DMB87_RS09545	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DMB87_RS09550	COG0114	fumarate hydratase activity
DMB87_RS09555	COG1607	acyl-coa hydrolase
DMB87_RS09560	COG4977	sequence-specific DNA binding
DMB87_RS09575	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DMB87_RS09620	COG2204	response regulator
DMB87_RS09625	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DMB87_RS09630	COG0312	modulator of DNA gyrase
DMB87_RS09635	COG3028	Belongs to the UPF0307 family
DMB87_RS09640	COG0521	Mo-molybdopterin cofactor biosynthetic process
DMB87_RS09645	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
DMB87_RS09650	COG0501	Belongs to the peptidase M48B family
DMB87_RS09655	COG1162	GTPase activity
DMB87_RS09675	COG0335	large ribosomal subunit rRNA binding
DMB87_RS09680	COG0336	Belongs to the RNA methyltransferase TrmD family
DMB87_RS09685	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DMB87_RS09710	COG1522	sequence-specific DNA binding
DMB87_RS09715	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DMB87_RS09735	COG2011	ABC-type metal ion transport system permease component
DMB87_RS09740	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DMB87_RS09745	COG2267	carboxylic ester hydrolase activity
DMB87_RS09750	COG1024	Enoyl-CoA hydratase
DMB87_RS09755	COG0123	including yeast histone deacetylase and acetoin utilization protein
DMB87_RS09760	COG2951	lytic endotransglycosylase activity
DMB87_RS09775	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DMB87_RS09780	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
DMB87_RS09790	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
DMB87_RS09800	COG0776	regulation of translation
DMB87_RS09810	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
DMB87_RS09830	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DMB87_RS09850	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DMB87_RS09870	COG1910	domain protein
DMB87_RS09885	COG3383	formate dehydrogenase (NAD+) activity
DMB87_RS09905	COG0640	Transcriptional regulator
DMB87_RS09930	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DMB87_RS09935	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DMB87_RS09935	COG4651	solute:proton antiporter activity
DMB87_RS09945	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
DMB87_RS09955	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DMB87_RS09965	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DMB87_RS09970	COG0402	S-adenosylhomocysteine deaminase activity
DMB87_RS09975	COG2119	membrane
DMB87_RS09985	COG0308	aminopeptidase N
DMB87_RS09990	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
DMB87_RS10020	COG0667	Aldo Keto reductase
DMB87_RS10030	COG2176	DNA-directed DNA polymerase activity
DMB87_RS10035	COG1278	Cold shock
DMB87_RS10045	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS10070	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DMB87_RS10075	COG1758	RNA polymerase activity
DMB87_RS10080	COG0194	GDP metabolic process
DMB87_RS10085	COG1561	YicC-like family, N-terminal region
DMB87_RS10090	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DMB87_RS10095	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DMB87_RS10100	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DMB87_RS10120	COG0477	Major facilitator Superfamily
DMB87_RS10130	COG0859	PFAM glycosyl transferase family 9
DMB87_RS10135	COG0038	chloride channel
DMB87_RS10145	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
DMB87_RS10155	COG0850	regulation of cytokinetic process
DMB87_RS10165	COG0024	Methionine aminopeptidase
DMB87_RS10240	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DMB87_RS10245	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DMB87_RS10255	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DMB87_RS10260	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DMB87_RS10265	COG0156	8-amino-7-oxononanoate synthase activity
DMB87_RS10280	COG3012	SEC-C Motif Domain Protein
DMB87_RS10285	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS10290	COG0183	Belongs to the thiolase family
DMB87_RS10295	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
DMB87_RS10300	COG0789	Transcriptional regulator
DMB87_RS10310	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
DMB87_RS10315	COG1674	ftsk spoiiie
DMB87_RS10320	COG0492	ferredoxin-NADP+ reductase activity
DMB87_RS10325	COG2840	Smr protein MutS2
DMB87_RS10330	COG3842	ATPase activity
DMB87_RS10350	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DMB87_RS10355	COG0363	glucosamine-6-phosphate deaminase activity
DMB87_RS10360	COG1737	Transcriptional regulator
DMB87_RS10360	COG0837	glucose binding
DMB87_RS10365	COG2814	Major facilitator Superfamily
DMB87_RS10380	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DMB87_RS10380	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DMB87_RS10395	COG5265	(ABC) transporter
DMB87_RS10405	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
DMB87_RS10410	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DMB87_RS10415	COG0436	Aminotransferase
DMB87_RS10420	COG0741	lytic transglycosylase activity
DMB87_RS10425	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DMB87_RS10430	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS10445	COG0762	integral membrane protein
DMB87_RS10460	COG1968	undecaprenyl-diphosphatase activity
DMB87_RS10485	COG0028	Belongs to the TPP enzyme family
DMB87_RS10490	COG1187	pseudouridine synthase activity
DMB87_RS10510	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DMB87_RS10515	COG0456	acetyltransferase
DMB87_RS10545	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
DMB87_RS10550	COG1047	Peptidyl-prolyl cis-trans
DMB87_RS10570	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DMB87_RS10580	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
DMB87_RS10595	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DMB87_RS10595	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DMB87_RS10600	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DMB87_RS10605	COG0196	riboflavin kinase activity
DMB87_RS10610	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DMB87_RS10615	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DMB87_RS10620	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DMB87_RS10625	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DMB87_RS10630	COG0756	dUTP diphosphatase activity
DMB87_RS10635	COG1113	amino acid transport
DMB87_RS10640	COG0542	response to heat
DMB87_RS10645	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
DMB87_RS10650	COG1278	Cold shock
DMB87_RS10695	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
DMB87_RS10705	COG0601	transmembrane transport
DMB87_RS10730	COG0656	L-ascorbic acid biosynthetic process
DMB87_RS10735	COG2188	Transcriptional regulator
DMB87_RS10745	COG0372	Belongs to the citrate synthase family
DMB87_RS10755	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DMB87_RS10760	COG2814	Major facilitator Superfamily
DMB87_RS10770	COG1595	DNA-templated transcription, initiation
DMB87_RS10775	COG0740	serine-type endopeptidase activity
DMB87_RS10790	COG1663	tetraacyldisaccharide 4'-kinase activity
DMB87_RS10795	COG2835	tetraacyldisaccharide 4'-kinase activity
DMB87_RS10800	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
DMB87_RS10805	COG0563	adenylate kinase activity
DMB87_RS10820	COG0728	peptidoglycan biosynthetic process
DMB87_RS10825	COG0268	Binds directly to 16S ribosomal RNA
DMB87_RS10835	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DMB87_RS10845	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS10850	COG0450	alkyl hydroperoxide reductase
DMB87_RS10905	COG4221	oxidoreductase activity
DMB87_RS10910	COG0824	Thioesterase
DMB87_RS10930	COG0823	Involved in the tonB-independent uptake of proteins
DMB87_RS10955	COG2353	YceI-like domain
DMB87_RS10965	COG3038	cytochrome b561
DMB87_RS10970	COG0583	DNA-binding transcription factor activity
DMB87_RS10985	COG0586	Pfam SNARE associated Golgi protein
DMB87_RS10990	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DMB87_RS11000	COG0246	Mannitol dehydrogenase
DMB87_RS11005	COG1070	Carbohydrate kinase
DMB87_RS11010	COG2390	Transcriptional regulator
DMB87_RS11025	COG3842	ATPase activity
DMB87_RS11030	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DMB87_RS11040	COG1175	transmembrane transport
DMB87_RS11060	COG1121	(ABC) transporter
DMB87_RS11065	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DMB87_RS11070	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
DMB87_RS11075	COG1070	Carbohydrate kinase
DMB87_RS11080	COG2233	PERMEase
DMB87_RS11085	COG1538	Outer membrane efflux protein
DMB87_RS11090	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DMB87_RS11095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DMB87_RS11105	COG1335	isochorismatase
DMB87_RS11130	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DMB87_RS11135	COG0642	Histidine kinase
DMB87_RS11140	COG0745	RESPONSE REGULATOR receiver
DMB87_RS11145	COG2027	D-alanyl-D-alanine carboxypeptidase
DMB87_RS11160	COG0009	L-threonylcarbamoyladenylate synthase
DMB87_RS11165	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DMB87_RS11170	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DMB87_RS11175	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
DMB87_RS11185	COG0469	pyruvate kinase activity
DMB87_RS11195	COG0126	phosphoglycerate kinase activity
DMB87_RS11215	COG0429	hydrolase of the alpha beta-hydrolase fold
DMB87_RS11230	COG0315	cyclic pyranopterin monophosphate synthase activity
DMB87_RS11240	COG3344	reverse transcriptase
DMB87_RS11250	COG4969	Belongs to the N-Me-Phe pilin family
DMB87_RS11255	COG0861	Integral membrane protein TerC family
DMB87_RS11260	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DMB87_RS11265	COG0045	succinate-CoA ligase (ADP-forming) activity
DMB87_RS11275	COG2137	regulation of response to DNA damage stimulus
DMB87_RS11280	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DMB87_RS11290	COG0642	Histidine kinase
DMB87_RS11310	COG2186	Transcriptional regulator
DMB87_RS11340	COG1272	protein, Hemolysin III
DMB87_RS11345	COG0513	Belongs to the DEAD box helicase family
DMB87_RS11370	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DMB87_RS11380	COG1396	sequence-specific DNA binding
DMB87_RS11385	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DMB87_RS11390	COG1702	phosphate starvation-inducible protein PhoH
DMB87_RS11395	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DMB87_RS11400	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
DMB87_RS11410	COG4535	Mg2 and Co2 transporter CorC
DMB87_RS11415	COG0815	Transfers the fatty acyl group on membrane lipoproteins
DMB87_RS11420	COG0752	glycyl-tRNA synthetase alpha subunit
DMB87_RS11425	COG0751	glycine-tRNA ligase activity
DMB87_RS11430	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DMB87_RS11435	COG0204	Acyl-transferase
DMB87_RS11455	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
DMB87_RS11475	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DMB87_RS11480	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DMB87_RS11485	COG0489	protein tyrosine kinase activity
DMB87_RS11485	COG3206	protein involved in exopolysaccharide biosynthesis
DMB87_RS11495	COG1596	polysaccharide export
DMB87_RS11510	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DMB87_RS11515	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DMB87_RS11520	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
DMB87_RS11525	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DMB87_RS11530	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DMB87_RS11540	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DMB87_RS11545	COG5265	(ABC) transporter
DMB87_RS11550	COG1607	acyl-coa hydrolase
DMB87_RS11565	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DMB87_RS11570	COG1024	Enoyl-CoA hydratase
DMB87_RS11575	COG0183	Belongs to the thiolase family
DMB87_RS11580	COG1250	3-hydroxyacyl-CoA dehydrogenase
DMB87_RS11580	COG1024	Enoyl-CoA hydratase
DMB87_RS11585	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS11595	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DMB87_RS11600	COG0494	nUDIX hydrolase
DMB87_RS11605	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DMB87_RS11620	COG3344	reverse transcriptase
DMB87_RS11625	COG0500	methyltransferase
DMB87_RS11630	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
DMB87_RS11645	COG2226	methyltransferase
DMB87_RS11665	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DMB87_RS11675	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
DMB87_RS11675	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
DMB87_RS11680	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DMB87_RS11685	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DMB87_RS11690	COG0557	exoribonuclease II activity
DMB87_RS11695	COG3150	esterase
DMB87_RS11700	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DMB87_RS11710	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DMB87_RS11715	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
DMB87_RS11720	COG0511	ligase activity, forming carbon-carbon bonds
DMB87_RS11725	COG0439	Biotin carboxylase
DMB87_RS11730	COG2264	protein methyltransferase activity
DMB87_RS11740	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DMB87_RS11745	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
DMB87_RS11745	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
DMB87_RS11775	COG3023	N-Acetylmuramoyl-L-alanine amidase
DMB87_RS11790	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DMB87_RS11800	COG2095	MarC family integral membrane protein
DMB87_RS11805	COG0442	prolyl-tRNA aminoacylation
DMB87_RS11810	COG0494	nUDIX hydrolase
DMB87_RS11820	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DMB87_RS11825	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DMB87_RS11830	COG0211	Belongs to the bacterial ribosomal protein bL27 family
DMB87_RS11835	COG0261	This protein binds to 23S rRNA in the presence of protein L20
DMB87_RS11840	COG0142	geranyltranstransferase activity
DMB87_RS11850	COG4536	flavin adenine dinucleotide binding
DMB87_RS11865	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DMB87_RS11870	COG0237	dephospho-CoA kinase activity
DMB87_RS11875	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
DMB87_RS11880	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
DMB87_RS11885	COG0494	nUDIX hydrolase
DMB87_RS11900	COG0653	protein targeting
DMB87_RS11910	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
DMB87_RS11915	COG0678	peroxiredoxin activity
DMB87_RS11930	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DMB87_RS11935	COG1181	Belongs to the D-alanine--D-alanine ligase family
DMB87_RS11940	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DMB87_RS11955	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DMB87_RS11960	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DMB87_RS11965	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DMB87_RS11970	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DMB87_RS11980	COG3116	cell division
DMB87_RS11985	COG0275	rRNA processing
DMB87_RS11995	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
DMB87_RS12000	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS12005	COG0318	PFAM AMP-dependent synthetase and ligase
DMB87_RS12010	COG0243	molybdopterin cofactor binding
DMB87_RS12015	COG1473	amidohydrolase
DMB87_RS12045	COG1024	Enoyl-CoA hydratase
DMB87_RS12060	COG1024	Enoyl-CoA hydratase
DMB87_RS12075	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
DMB87_RS12080	COG2967	ApaG domain
DMB87_RS12085	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DMB87_RS12090	COG0546	phosphoglycolate phosphatase activity
DMB87_RS12100	COG0512	Glutamine amidotransferase of anthranilate synthase
DMB87_RS12105	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DMB87_RS12110	COG0134	indole-3-glycerol-phosphate synthase activity
DMB87_RS12120	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DMB87_RS12125	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DMB87_RS12135	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DMB87_RS12140	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DMB87_RS12145	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DMB87_RS12145	COG1017	nitric oxide dioxygenase activity
DMB87_RS12150	COG0012	GTP binding
DMB87_RS12155	COG0488	(ABC) transporter
DMB87_RS12165	COG0006	proline dipeptidase activity
DMB87_RS12175	COG0745	RESPONSE REGULATOR receiver
DMB87_RS12180	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
DMB87_RS12185	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DMB87_RS12190	COG2890	protein-(glutamine-N5) methyltransferase activity
DMB87_RS12195	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DMB87_RS12205	COG3384	dioxygenase
DMB87_RS12210	COG0531	amino acid
DMB87_RS12215	COG1278	Cold shock
DMB87_RS12220	COG0443	Heat shock 70 kDa protein
DMB87_RS12270	COG2969	positive regulation of protein catabolic process
DMB87_RS12275	COG0625	glutathione transferase activity
DMB87_RS12280	COG2857	Cytochrome c1
DMB87_RS12285	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DMB87_RS12290	COG0723	plastoquinol--plastocyanin reductase activity
DMB87_RS12295	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DMB87_RS12305	COG0805	protein transport
DMB87_RS12310	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DMB87_RS12315	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DMB87_RS12340	COG0107	imidazoleglycerol-phosphate synthase activity
DMB87_RS12345	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
DMB87_RS12350	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DMB87_RS12360	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DMB87_RS12375	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DMB87_RS12385	COG0842	Transport permease protein
DMB87_RS12390	COG1131	(ABC) transporter
DMB87_RS12410	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DMB87_RS12415	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DMB87_RS12420	COG1127	ABC transporter
DMB87_RS12445	COG4178	(ABC) transporter
DMB87_RS12460	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DMB87_RS12475	COG0070	glutamate synthase
DMB87_RS12475	COG0069	glutamate synthase activity
DMB87_RS12475	COG0067	glutamate synthase
DMB87_RS12495	COG0584	glycerophosphoryl diester phosphodiesterase
DMB87_RS12500	COG0232	Belongs to the dGTPase family. Type 2 subfamily
DMB87_RS12540	COG1965	Belongs to the frataxin family
DMB87_RS12555	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
DMB87_RS12560	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DMB87_RS12565	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DMB87_RS12570	COG1333	cytochrome c biogenesis protein
DMB87_RS12580	COG0218	Necessary for normal cell division and for the maintenance of normal septation
DMB87_RS12590	COG4232	protein-disulfide reductase activity
DMB87_RS12605	COG0202	RNA polymerase activity
DMB87_RS12610	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DMB87_RS12615	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DMB87_RS12625	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DMB87_RS12635	COG0201	protein transport
DMB87_RS12655	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DMB87_RS12660	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DMB87_RS12670	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DMB87_RS12675	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DMB87_RS12680	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DMB87_RS12685	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DMB87_RS12695	COG0255	Belongs to the universal ribosomal protein uL29 family
DMB87_RS12700	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DMB87_RS12705	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DMB87_RS12715	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DMB87_RS12720	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DMB87_RS12725	COG0089	rRNA binding
DMB87_RS12730	COG0088	Forms part of the polypeptide exit tunnel
DMB87_RS12735	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DMB87_RS12740	COG0051	transcription antitermination factor activity, RNA binding
DMB87_RS12755	COG0049	tRNA binding
DMB87_RS12760	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DMB87_RS12770	COG0514	ATP-dependent DNA helicase (RecQ)
DMB87_RS12795	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS12800	COG0577	efflux transmembrane transporter activity
DMB87_RS12800	COG1136	(ABC) transporter
DMB87_RS12810	COG1136	(ABC) transporter
DMB87_RS12825	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DMB87_RS12830	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DMB87_RS12845	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS12850	COG0736	holo-[acyl-carrier-protein] synthase activity
DMB87_RS12860	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DMB87_RS12865	COG0085	RNA polymerase activity
DMB87_RS12870	COG0222	ribosome binding
DMB87_RS12875	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DMB87_RS12885	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DMB87_RS12895	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DMB87_RS12955	COG3396	Phenylacetate-CoA oxygenase
DMB87_RS12960	COG3460	Phenylacetate-CoA oxygenase
DMB87_RS12965	COG3396	Phenylacetate-CoA oxygenase
DMB87_RS12970	COG2151	metal-sulfur cluster biosynthetic enzyme
DMB87_RS12975	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DMB87_RS12995	COG1522	sequence-specific DNA binding
DMB87_RS13020	COG2814	Major facilitator Superfamily
DMB87_RS13025	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DMB87_RS13030	COG2197	response regulator
DMB87_RS13035	COG1881	PFAM PEBP family protein
DMB87_RS13040	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DMB87_RS13080	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DMB87_RS13095	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DMB87_RS13145	COG0741	lytic transglycosylase activity
DMB87_RS13150	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DMB87_RS13160	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DMB87_RS13165	COG1984	allophanate hydrolase subunit 2
DMB87_RS13170	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
DMB87_RS13200	COG4608	Belongs to the ABC transporter superfamily
DMB87_RS13205	COG0444	Belongs to the ABC transporter superfamily
DMB87_RS13210	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DMB87_RS13215	COG0601	transmembrane transport
DMB87_RS13220	COG0747	negative chemotaxis
DMB87_RS13230	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DMB87_RS13235	COG1950	PFAM Membrane protein of
DMB87_RS13240	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
DMB87_RS13245	COG1215	transferase activity, transferring glycosyl groups
DMB87_RS13250	COG1346	cytolysis
DMB87_RS13260	COG0583	DNA-binding transcription factor activity
DMB87_RS13265	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DMB87_RS13265	COG2885	chlorophyll binding
DMB87_RS13280	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DMB87_RS13305	COG1766	The M ring may be actively involved in energy transduction
DMB87_RS13310	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DMB87_RS13350	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DMB87_RS13365	COG1987	bacterial-type flagellum assembly
DMB87_RS13390	COG1256	bacterial-type flagellum assembly
DMB87_RS13395	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
DMB87_RS13400	COG3951	Flagellar rod assembly protein muramidase FlgJ
DMB87_RS13400	COG1705	Flagellar rod assembly protein muramidase FlgJ
DMB87_RS13405	COG1706	bacterial-type flagellum-dependent cell motility
DMB87_RS13415	COG4786	Flagellar basal body rod
DMB87_RS13420	COG4787	bacterial-type flagellum-dependent cell motility
DMB87_RS13425	COG1749	Flagellar hook protein flgE
DMB87_RS13430	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
DMB87_RS13435	COG1558	bacterial-type flagellum-dependent cell motility
DMB87_RS13440	COG1815	bacterial-type flagellum-dependent cell motility
DMB87_RS13445	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
DMB87_RS13475	COG1191	sigma factor activity
DMB87_RS13495	COG2026	Addiction module toxin, RelE StbE family
DMB87_RS13500	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DMB87_RS13505	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DMB87_RS13520	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
DMB87_RS13525	COG0745	RESPONSE REGULATOR receiver
DMB87_RS13530	COG2201	protein-glutamate methylesterase activity
DMB87_RS13535	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
DMB87_RS13545	COG0840	transmembrane signaling receptor activity
DMB87_RS13560	COG0745	RESPONSE REGULATOR receiver
DMB87_RS13580	COG0438	transferase activity, transferring glycosyl groups
DMB87_RS13585	COG2916	Histone family protein nucleoid-structuring protein H-NS
DMB87_RS13590	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DMB87_RS13610	COG2818	Glycosylase
DMB87_RS13625	COG0667	Aldo Keto reductase
DMB87_RS13630	COG3511	phospholipase C
DMB87_RS13640	COG0583	DNA-binding transcription factor activity
DMB87_RS13665	COG3246	L-lysine catabolic process to acetate
DMB87_RS13670	COG3246	L-lysine catabolic process to acetate
DMB87_RS13685	COG2175	clavaminate synthase activity
DMB87_RS13700	COG0318	PFAM AMP-dependent synthetase and ligase
DMB87_RS13705	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS13725	COG0582	viral genome integration into host DNA
DMB87_RS13740	COG0210	DNA helicase
DMB87_RS13745	COG0673	inositol 2-dehydrogenase activity
DMB87_RS13755	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DMB87_RS13760	COG0509	glycine decarboxylation via glycine cleavage system
DMB87_RS13765	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DMB87_RS13765	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
DMB87_RS13775	COG1760	l-serine dehydratase
DMB87_RS13780	COG0028	Belongs to the TPP enzyme family
DMB87_RS13785	COG0683	leucine binding
DMB87_RS13790	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DMB87_RS13790	COG0506	proline dehydrogenase activity
DMB87_RS13790	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DMB87_RS13795	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DMB87_RS13800	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
DMB87_RS13810	COG0318	PFAM AMP-dependent synthetase and ligase
DMB87_RS13820	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DMB87_RS13830	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DMB87_RS13840	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DMB87_RS13845	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DMB87_RS13855	COG0356	it plays a direct role in the translocation of protons across the membrane
DMB87_RS13865	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DMB87_RS13875	COG1192	Involved in chromosome partitioning
DMB87_RS13885	COG0445	tRNA wobble uridine modification
DMB87_RS13895	COG0411	ABC transporter
DMB87_RS13935	COG0411	ABC transporter
DMB87_RS13945	COG0583	DNA-binding transcription factor activity
DMB87_RS13955	COG1522	sequence-specific DNA binding
DMB87_RS13960	COG3186	Phenylalanine-4-hydroxylase
DMB87_RS13980	COG0642	Histidine kinase
DMB87_RS13990	COG1902	pentaerythritol trinitrate reductase activity
DMB87_RS14005	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
DMB87_RS14015	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
DMB87_RS14015	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DMB87_RS14025	COG0523	cobalamin synthesis protein
DMB87_RS14030	COG0741	lytic transglycosylase activity
DMB87_RS14105	COG1846	Transcriptional regulator
DMB87_RS14110	COG2814	Major facilitator Superfamily
DMB87_RS14135	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DMB87_RS14135	COG2169	Transcriptional regulator
DMB87_RS14145	COG4681	YaeQ
DMB87_RS14155	COG1280	lysine exporter protein (LysE YggA)
DMB87_RS14165	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DMB87_RS14190	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DMB87_RS14200	COG0706	membrane insertase activity
DMB87_RS14205	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
DMB87_RS14210	COG0594	ribonuclease P activity
DMB87_RS14220	COG0405	Gamma-glutamyltransferase
DMB87_RS14225	COG1953	Uracil, thiamine, allantoin
DMB87_RS14280	COG0583	DNA-binding transcription factor activity
DMB87_RS14285	COG2233	PERMEase
DMB87_RS14310	COG2824	Alkylphosphonate utilization operon protein PhnA
DMB87_RS14325	COG0651	ATP synthesis coupled electron transport
DMB87_RS14330	COG0650	Formate hydrogenlyase subunit 4
DMB87_RS14340	COG0651	ATP synthesis coupled electron transport
DMB87_RS14345	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
DMB87_RS14345	COG3261	NADH dehydrogenase
DMB87_RS14350	COG3260	NADH ubiquinone oxidoreductase 20
DMB87_RS14375	COG2271	Major facilitator Superfamily
DMB87_RS14385	COG2351	hydroxyisourate hydrolase activity
DMB87_RS14390	COG0590	tRNA wobble adenosine to inosine editing
DMB87_RS14400	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DMB87_RS14405	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS14410	COG0247	lactate metabolic process
DMB87_RS14410	COG0277	FAD linked oxidase domain protein
DMB87_RS14420	COG0583	DNA-binding transcription factor activity
DMB87_RS14425	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DMB87_RS14430	COG0833	amino acid
DMB87_RS14445	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
DMB87_RS14480	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS14490	COG3119	arylsulfatase activity
DMB87_RS14495	COG0583	DNA-binding transcription factor activity
DMB87_RS14510	COG3246	L-lysine catabolic process to acetate
DMB87_RS14515	COG1250	3-hydroxyacyl-CoA dehydrogenase
DMB87_RS14520	COG1250	3-hydroxyacyl-CoA dehydrogenase
DMB87_RS14520	COG0824	Thioesterase
DMB87_RS14535	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DMB87_RS14540	COG1335	isochorismatase
DMB87_RS14550	COG1609	Transcriptional regulator
DMB87_RS14555	COG2233	PERMEase
DMB87_RS14570	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS14595	COG2409	Drug exporters of the RND superfamily
DMB87_RS14610	COG2207	Transcriptional regulator
DMB87_RS14690	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS14695	COG0824	Thioesterase
DMB87_RS14700	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DMB87_RS14705	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS14710	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS14725	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS14730	COG0183	Belongs to the thiolase family
DMB87_RS14740	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS14750	COG1024	Enoyl-CoA hydratase
DMB87_RS14755	COG2909	trisaccharide binding
DMB87_RS14765	COG0183	Belongs to the thiolase family
DMB87_RS14770	COG1250	3-hydroxyacyl-CoA dehydrogenase
DMB87_RS14770	COG1024	Enoyl-CoA hydratase
DMB87_RS14780	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS14785	COG1022	Amp-dependent synthetase and ligase
DMB87_RS14790	COG1024	Enoyl-CoA hydratase
DMB87_RS14800	COG1454	alcohol dehydrogenase
DMB87_RS14830	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS14835	COG1064	alcohol dehydrogenase
DMB87_RS14845	COG2015	COG2015, Alkyl sulfatase and related hydrolases
DMB87_RS14875	COG1113	amino acid transport
DMB87_RS14890	COG1917	Cupin 2, conserved barrel domain protein
DMB87_RS14925	COG0583	DNA-binding transcription factor activity
DMB87_RS14930	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DMB87_RS14930	COG1116	anion transmembrane transporter activity
DMB87_RS14935	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DMB87_RS14950	COG0179	Fumarylacetoacetate (FAA) hydrolase
DMB87_RS14960	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DMB87_RS14975	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DMB87_RS15000	COG0583	DNA-binding transcription factor activity
DMB87_RS15005	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS15015	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DMB87_RS15020	COG0477	Major facilitator Superfamily
DMB87_RS15045	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DMB87_RS15065	COG2233	PERMEase
DMB87_RS15075	COG0583	DNA-binding transcription factor activity
DMB87_RS15080	COG1252	NADH dehydrogenase
DMB87_RS15100	COG0583	DNA-binding transcription factor activity
DMB87_RS15110	COG1017	nitric oxide dioxygenase activity
DMB87_RS15110	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DMB87_RS15125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DMB87_RS15130	COG1473	amidohydrolase
DMB87_RS15135	COG0583	DNA-binding transcription factor activity
DMB87_RS15145	COG3158	transport of potassium into the cell
DMB87_RS15150	COG2271	Major facilitator Superfamily
DMB87_RS15180	COG2814	Major facilitator Superfamily
DMB87_RS15215	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DMB87_RS15220	COG1073	alpha beta
DMB87_RS15220	COG2226	methyltransferase
DMB87_RS15230	COG1024	Enoyl-CoA hydratase
DMB87_RS15240	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
DMB87_RS15265	COG1278	Cold shock
DMB87_RS15295	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DMB87_RS15315	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DMB87_RS15320	COG4569	acetaldehyde dehydrogenase (acetylating) activity
DMB87_RS15330	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS15340	COG0346	lactoylglutathione lyase activity
DMB87_RS15410	COG3243	poly(R)-hydroxyalkanoic acid synthase
DMB87_RS15420	COG2030	dehydratase
DMB87_RS15510	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DMB87_RS15530	COG1802	Transcriptional regulator
DMB87_RS15540	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS15555	COG1063	alcohol dehydrogenase
DMB87_RS15560	COG3971	2-oxopent-4-enoate hydratase activity
DMB87_RS15600	COG0543	2 iron, 2 sulfur cluster binding
DMB87_RS15600	COG0633	Ferredoxin
DMB87_RS15615	COG2207	Transcriptional regulator
DMB87_RS15725	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DMB87_RS15725	COG1796	DNA polymerase
DMB87_RS15740	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DMB87_RS15765	COG1611	Belongs to the LOG family
DMB87_RS15770	COG2249	NAD(P)H dehydrogenase (quinone) activity
DMB87_RS15780	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DMB87_RS15785	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DMB87_RS15790	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DMB87_RS15790	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DMB87_RS15800	COG0356	it plays a direct role in the translocation of protons across the membrane
DMB87_RS15815	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DMB87_RS15820	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DMB87_RS15860	COG0318	PFAM AMP-dependent synthetase and ligase
DMB87_RS15865	COG0574	Belongs to the PEP-utilizing enzyme family
DMB87_RS15865	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DMB87_RS15870	COG0589	response to stress
DMB87_RS15875	COG1538	Outer membrane efflux protein
DMB87_RS15885	COG1136	(ABC) transporter
DMB87_RS15925	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS15950	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
DMB87_RS15965	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DMB87_RS16000	COG0589	response to stress
DMB87_RS16015	COG0517	IMP dehydrogenase activity
DMB87_RS16035	COG0840	transmembrane signaling receptor activity
DMB87_RS16065	COG0765	amino acid transport
DMB87_RS16075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DMB87_RS16080	COG0590	tRNA wobble adenosine to inosine editing
DMB87_RS16135	COG3971	2-oxopent-4-enoate hydratase activity
DMB87_RS16145	COG3384	dioxygenase
DMB87_RS16150	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS16160	COG0179	Fumarylacetoacetate (FAA) hydrolase
DMB87_RS16205	COG2271	Major facilitator Superfamily
DMB87_RS16210	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS16215	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS16220	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DMB87_RS16260	COG0174	glutamine synthetase
DMB87_RS16265	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DMB87_RS16275	COG1473	amidohydrolase
DMB87_RS16280	COG0583	DNA-binding transcription factor activity
DMB87_RS16315	COG4941	Belongs to the sigma-70 factor family
DMB87_RS16330	COG2226	methyltransferase
DMB87_RS16345	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DMB87_RS16350	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS16380	COG2986	histidine ammonia-lyase
DMB87_RS16385	COG0463	Glycosyl transferase, family 2
DMB87_RS16400	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DMB87_RS16455	COG1278	Cold shock
DMB87_RS16505	COG2130	NADP-dependent
DMB87_RS16510	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS16520	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS16535	COG1289	transmembrane transporter activity
DMB87_RS16560	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DMB87_RS16565	COG3119	arylsulfatase activity
DMB87_RS16580	COG1024	Enoyl-CoA hydratase
DMB87_RS16605	COG1192	Involved in chromosome partitioning
DMB87_RS16610	COG1475	DNA binding
DMB87_RS16615	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DMB87_RS16625	COG2258	MOSC domain
DMB87_RS16635	COG0583	DNA-binding transcription factor activity
DMB87_RS16655	COG1584	GPR1 FUN34 yaaH family protein
DMB87_RS16660	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DMB87_RS16680	COG1595	DNA-templated transcription, initiation
DMB87_RS16685	COG4944	Protein of unknown function (DUF1109)
DMB87_RS16700	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS16705	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
DMB87_RS16710	COG0583	DNA-binding transcription factor activity
DMB87_RS16725	COG1104	cysteine desulfurase activity
DMB87_RS16730	COG3142	Participates in the control of copper homeostasis
DMB87_RS16745	COG0655	NAD(P)H dehydrogenase (quinone) activity
DMB87_RS16755	COG3706	GGDEF domain
DMB87_RS16765	COG0583	DNA-binding transcription factor activity
DMB87_RS16770	COG0417	DNA replication proofreading
DMB87_RS16800	COG3258	Cytochrome c
DMB87_RS16815	COG0183	Belongs to the thiolase family
DMB87_RS16820	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS16825	COG2916	Histone family protein nucleoid-structuring protein H-NS
DMB87_RS16830	COG4206	TonB-dependent receptor
DMB87_RS16845	COG1473	amidohydrolase
DMB87_RS16865	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DMB87_RS16870	COG0473	3-isopropylmalate dehydrogenase activity
DMB87_RS16895	COG3501	Rhs element vgr protein
DMB87_RS16970	COG3104	oligopeptide transport
DMB87_RS16995	COG2909	trisaccharide binding
DMB87_RS17025	COG3501	Rhs element vgr protein
DMB87_RS17030	COG3179	chitinase
DMB87_RS17050	COG2207	Transcriptional regulator
DMB87_RS17055	COG2197	response regulator
DMB87_RS17065	COG2175	clavaminate synthase activity
DMB87_RS17075	COG0477	Major facilitator Superfamily
DMB87_RS17080	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS17090	COG0243	molybdopterin cofactor binding
DMB87_RS17095	COG0437	4 iron, 4 sulfur cluster binding
DMB87_RS17100	COG3302	dmso reductase anchor subunit
DMB87_RS17135	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
DMB87_RS17145	COG0601	transmembrane transport
DMB87_RS17155	COG0444	Belongs to the ABC transporter superfamily
DMB87_RS17160	COG4608	Belongs to the ABC transporter superfamily
DMB87_RS17165	COG2271	Major facilitator Superfamily
DMB87_RS17170	COG0583	DNA-binding transcription factor activity
DMB87_RS17185	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DMB87_RS17195	COG0477	Major facilitator Superfamily
DMB87_RS17205	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DMB87_RS17230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DMB87_RS17235	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DMB87_RS17245	COG0655	NAD(P)H dehydrogenase (quinone) activity
DMB87_RS17255	COG2259	Doxx family
DMB87_RS17260	COG1741	Belongs to the pirin family
DMB87_RS17265	COG0583	DNA-binding transcription factor activity
DMB87_RS17290	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS17295	COG1309	transcriptional regulator
DMB87_RS17300	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS17305	COG1760	l-serine dehydratase
DMB87_RS17320	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DMB87_RS17320	COG0446	pyridine nucleotide-disulphide oxidoreductase
DMB87_RS17370	COG1902	pentaerythritol trinitrate reductase activity
DMB87_RS17370	COG0446	pyridine nucleotide-disulphide oxidoreductase
DMB87_RS17375	COG2181	nitrate reductase activity
DMB87_RS17375	COG0247	lactate metabolic process
DMB87_RS17380	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DMB87_RS17400	COG2113	Glycine betaine
DMB87_RS17445	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DMB87_RS17485	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS17505	COG2885	chlorophyll binding
DMB87_RS17510	COG0023	Translation Initiation Factor
DMB87_RS17535	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DMB87_RS17545	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DMB87_RS17550	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DMB87_RS17555	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DMB87_RS17575	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DMB87_RS17615	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DMB87_RS17620	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DMB87_RS17650	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DMB87_RS17655	COG0148	phosphopyruvate hydratase activity
DMB87_RS17660	COG0148	phosphopyruvate hydratase activity
DMB87_RS17680	COG0651	ATP synthesis coupled electron transport
DMB87_RS17685	COG0649	NAD binding
DMB87_RS17685	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DMB87_RS17690	COG3260	NADH ubiquinone oxidoreductase 20
DMB87_RS17700	COG0038	chloride channel
DMB87_RS17720	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DMB87_RS17755	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS17765	COG1024	Enoyl-CoA hydratase
DMB87_RS17785	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS17790	COG1024	Enoyl-CoA hydratase
DMB87_RS17795	COG1024	Enoyl-CoA hydratase
DMB87_RS17800	COG0183	Belongs to the thiolase family
DMB87_RS17805	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS17810	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DMB87_RS17815	COG1024	Enoyl-CoA hydratase
DMB87_RS17820	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS17870	COG2015	COG2015, Alkyl sulfatase and related hydrolases
DMB87_RS17880	COG1024	Enoyl-CoA hydratase
DMB87_RS17885	COG2249	NAD(P)H dehydrogenase (quinone) activity
DMB87_RS17890	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS17895	COG3064	Membrane
DMB87_RS17925	COG0697	spore germination
DMB87_RS17930	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS17935	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DMB87_RS17940	COG2271	Major facilitator Superfamily
DMB87_RS17970	COG0346	lactoylglutathione lyase activity
DMB87_RS17975	COG1063	alcohol dehydrogenase
DMB87_RS17980	COG0330	HflC and HflK could
DMB87_RS18010	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
DMB87_RS18025	COG1511	domain protein
DMB87_RS18025	COG3264	Mechanosensitive ion channel
DMB87_RS18045	COG1414	Transcriptional regulator
DMB87_RS18060	COG3971	2-oxopent-4-enoate hydratase activity
DMB87_RS18075	COG2814	Major facilitator Superfamily
DMB87_RS18080	COG1073	alpha beta
DMB87_RS18110	COG3708	Transcriptional regulator
DMB87_RS18110	COG2207	Transcriptional regulator
DMB87_RS18115	COG4566	intracellular signal transduction
DMB87_RS18135	COG2015	COG2015, Alkyl sulfatase and related hydrolases
DMB87_RS18155	COG2217	Heavy metal translocating P-type atpase
DMB87_RS18160	COG2015	COG2015, Alkyl sulfatase and related hydrolases
DMB87_RS18190	COG3119	arylsulfatase activity
DMB87_RS18200	COG0641	radical SAM
DMB87_RS18210	COG0318	PFAM AMP-dependent synthetase and ligase
DMB87_RS18215	COG4566	intracellular signal transduction
DMB87_RS18220	COG4191	Histidine kinase
DMB87_RS18230	COG2175	clavaminate synthase activity
DMB87_RS18245	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS18265	COG3706	GGDEF domain
DMB87_RS18285	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DMB87_RS18300	COG0477	Major facilitator Superfamily
DMB87_RS18305	COG0154	amidase activity
DMB87_RS18315	COG2271	Major facilitator Superfamily
DMB87_RS18325	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DMB87_RS18330	COG1250	3-hydroxyacyl-CoA dehydrogenase
DMB87_RS18340	COG0583	DNA-binding transcription factor activity
DMB87_RS18345	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS18365	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DMB87_RS18395	COG0477	Major facilitator Superfamily
DMB87_RS18400	COG0235	Class ii aldolase
DMB87_RS18405	COG1012	belongs to the aldehyde dehydrogenase family
DMB87_RS18410	COG0028	Belongs to the TPP enzyme family
DMB87_RS18420	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DMB87_RS18425	COG0477	Major facilitator Superfamily
DMB87_RS18430	COG0583	DNA-binding transcription factor activity
DMB87_RS18445	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
DMB87_RS18470	COG3111	PFAM Bacterial OB fold (BOF) protein
DMB87_RS18475	COG0745	RESPONSE REGULATOR receiver
DMB87_RS18485	COG0671	phosphoesterase, PA-phosphatase related
DMB87_RS18490	COG2916	Histone family protein nucleoid-structuring protein H-NS
DMB87_RS18505	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS18515	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DMB87_RS18525	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DMB87_RS18530	COG0642	Histidine kinase
DMB87_RS18540	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS18545	COG0471	metal ion transport
DMB87_RS18550	COG2974	May be involved in recombination
DMB87_RS18560	COG4948	Mandelate Racemase Muconate Lactonizing
DMB87_RS18565	COG1301	dicarboxylic acid transport
DMB87_RS18580	COG3119	arylsulfatase activity
DMB87_RS18585	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DMB87_RS18590	COG0714	Associated with various cellular activities
DMB87_RS18610	COG2304	oxidoreductase activity
DMB87_RS18710	COG3501	Rhs element vgr protein
DMB87_RS18755	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DMB87_RS18760	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DMB87_RS18805	COG3501	Rhs element vgr protein
DMB87_RS18825	COG0583	DNA-binding transcription factor activity
DMB87_RS18845	COG3121	Chaperone
DMB87_RS18860	COG3121	Chaperone
DMB87_RS18885	COG2233	PERMEase
DMB87_RS18890	COG0583	DNA-binding transcription factor activity
DMB87_RS18895	COG3038	cytochrome b561
DMB87_RS19005	COG3246	L-lysine catabolic process to acetate
DMB87_RS19060	COG4336	lyase activity
DMB87_RS19075	COG3791	Glutathione-dependent formaldehyde-activating
DMB87_RS19080	COG0477	Major facilitator Superfamily
DMB87_RS19085	COG0156	8-amino-7-oxononanoate synthase activity
DMB87_RS19090	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DMB87_RS19095	COG0242	peptide deformylase activity
DMB87_RS19100	COG0683	leucine binding
DMB87_RS19105	COG1522	sequence-specific DNA binding
DMB87_RS19110	COG0318	PFAM AMP-dependent synthetase and ligase
DMB87_RS19120	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS19130	COG2197	response regulator
DMB87_RS19135	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DMB87_RS19165	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS19175	COG3064	Membrane
DMB87_RS19185	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DMB87_RS19215	COG0765	amino acid transport
DMB87_RS19230	COG4974	Belongs to the 'phage' integrase family
DMB87_RS19255	COG1953	Uracil, thiamine, allantoin
DMB87_RS19260	COG1953	Uracil, thiamine, allantoin
DMB87_RS19285	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DMB87_RS19305	COG1615	UPF0182 protein
DMB87_RS19330	COG0596	Alpha beta hydrolase
DMB87_RS19335	COG2814	Major facilitator Superfamily
DMB87_RS19350	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DMB87_RS19355	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS19360	COG0183	Belongs to the thiolase family
DMB87_RS19365	COG2030	dehydratase
DMB87_RS19375	COG1028	Short-chain dehydrogenase reductase Sdr
DMB87_RS19395	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DMB87_RS19405	COG1024	Enoyl-CoA hydratase
DMB87_RS19415	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS19420	COG1960	acyl-CoA dehydrogenase activity
DMB87_RS19430	COG1414	Transcriptional regulator
DMB87_RS19435	COG2909	trisaccharide binding
DMB87_RS19455	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DMB87_RS19485	COG0446	pyridine nucleotide-disulphide oxidoreductase
DMB87_RS19485	COG1902	pentaerythritol trinitrate reductase activity
DMB87_RS19510	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DMB87_RS19520	COG0583	DNA-binding transcription factor activity
DMB87_RS19525	COG0583	DNA-binding transcription factor activity
DMB87_RS19530	COG1126	abc transporter atp-binding protein
DMB87_RS19540	COG0765	amino acid transport
DMB87_RS19550	COG3842	ATPase activity
DMB87_RS19560	COG1176	ABC-type spermidine putrescine transport system, permease component I
DMB87_RS19615	COG0395	ABC-type sugar transport system, permease component
DMB87_RS19625	COG1653	transport
DMB87_RS19670	COG1802	Transcriptional regulator
DMB87_RS19680	COG3246	L-lysine catabolic process to acetate
DMB87_RS19705	COG0446	pyridine nucleotide-disulphide oxidoreductase
DMB87_RS19705	COG1902	pentaerythritol trinitrate reductase activity
DMB87_RS19725	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DMB87_RS19730	COG2271	Major facilitator Superfamily
DMB87_RS19735	COG0154	amidase activity
DMB87_RS19740	COG2271	Major facilitator Superfamily
DMB87_RS19765	COG0410	ABC transporter
DMB87_RS19780	COG0559	Belongs to the binding-protein-dependent transport system permease family
DMB87_RS19790	COG1802	Transcriptional regulator
DMB87_RS19830	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DMB87_RS19835	COG0765	amino acid transport
DMB87_RS19840	COG1126	abc transporter atp-binding protein
DMB87_RS19855	COG4154	Belongs to the RbsD FucU family
DMB87_RS19860	COG1473	amidohydrolase
DMB87_RS19870	COG3265	gluconokinase activity
DMB87_RS19875	COG1609	Transcriptional regulator
DMB87_RS19880	COG1278	Cold shock
DMB87_RS19890	COG1671	Belongs to the UPF0178 family
DMB87_RS19910	COG2084	Dehydrogenase
DMB87_RS19935	COG0667	Aldo Keto reductase
DMB87_RS19950	COG1473	amidohydrolase
DMB87_RS19955	COG1288	antiporter activity