locus-tag	class	description
CUJ91_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CUJ91_RS00080	COG4303	Ethanolamine ammonia lyase large subunit
CUJ91_RS00085	COG4302	ethanolamine ammonia-lyase activity
CUJ91_RS00095	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS00100	COG2207	Transcriptional regulator
CUJ91_RS00110	COG0789	Transcriptional regulator
CUJ91_RS00120	COG0513	Belongs to the DEAD box helicase family
CUJ91_RS00125	COG0436	Aminotransferase
CUJ91_RS00130	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS00145	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CUJ91_RS00150	COG0450	alkyl hydroperoxide reductase
CUJ91_RS00155	COG3128	pkhd-type hydroxylase
CUJ91_RS00160	COG4774	siderophore transport
CUJ91_RS00170	COG0582	viral genome integration into host DNA
CUJ91_RS00220	COG1278	Cold shock
CUJ91_RS00250	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ91_RS00255	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CUJ91_RS00260	COG0583	DNA-binding transcription factor activity
CUJ91_RS00265	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS00270	COG0154	amidase activity
CUJ91_RS00275	COG2271	Major facilitator Superfamily
CUJ91_RS00300	COG3547	Transposase (IS116 IS110 IS902 family)
CUJ91_RS00340	COG2201	protein-glutamate methylesterase activity
CUJ91_RS00370	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUJ91_RS00375	COG1914	H( )-stimulated, divalent metal cation uptake system
CUJ91_RS00425	COG2831	hemolysin activation secretion protein
CUJ91_RS00430	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CUJ91_RS00490	COG5377	YqaJ viral recombinase family
CUJ91_RS00565	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUJ91_RS00570	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
CUJ91_RS00575	COG0583	DNA-binding transcription factor activity
CUJ91_RS00590	COG0758	DNA mediated transformation
CUJ91_RS00595	COG0242	peptide deformylase activity
CUJ91_RS00600	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CUJ91_RS00610	COG0501	Belongs to the peptidase M48B family
CUJ91_RS00625	COG5000	phosphorelay sensor kinase activity
CUJ91_RS00630	COG2204	response regulator
CUJ91_RS00640	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CUJ91_RS00645	COG0602	queuosine metabolic process
CUJ91_RS00650	COG0720	synthase
CUJ91_RS00665	COG0772	Belongs to the SEDS family
CUJ91_RS00670	COG0768	penicillin binding
CUJ91_RS00685	COG1077	Cell shape determining protein MreB Mrl
CUJ91_RS00690	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CUJ91_RS00695	COG0154	amidase activity
CUJ91_RS00700	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CUJ91_RS00705	COG2326	polyphosphate kinase activity
CUJ91_RS00710	COG0708	Exodeoxyribonuclease III
CUJ91_RS00720	COG2814	Major facilitator Superfamily
CUJ91_RS00730	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CUJ91_RS00740	COG1309	transcriptional regulator
CUJ91_RS00750	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CUJ91_RS00770	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
CUJ91_RS00775	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CUJ91_RS00780	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CUJ91_RS00790	COG0523	cobalamin synthesis protein
CUJ91_RS00795	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CUJ91_RS00800	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CUJ91_RS00810	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CUJ91_RS00815	COG1560	Kdo2-lipid A biosynthetic process
CUJ91_RS00820	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CUJ91_RS00840	COG0667	Aldo Keto reductase
CUJ91_RS00850	COG2814	Major facilitator Superfamily
CUJ91_RS00860	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CUJ91_RS00870	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CUJ91_RS00910	COG0531	amino acid
CUJ91_RS00930	COG3568	Endonuclease Exonuclease Phosphatase
CUJ91_RS00940	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CUJ91_RS00945	COG0579	oxidoreductase
CUJ91_RS00960	COG0154	amidase activity
CUJ91_RS00980	COG2223	nitrite transmembrane transporter activity
CUJ91_RS00990	COG2916	Histone family protein nucleoid-structuring protein H-NS
CUJ91_RS00995	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CUJ91_RS01000	COG1522	sequence-specific DNA binding
CUJ91_RS01010	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ91_RS01025	COG0792	nuclease activity
CUJ91_RS01030	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CUJ91_RS01060	COG1715	Restriction endonuclease
CUJ91_RS01070	COG0840	transmembrane signaling receptor activity
CUJ91_RS01075	COG2203	Gaf domain
CUJ91_RS01075	COG3706	GGDEF domain
CUJ91_RS01075	COG4251	negative regulation of phosphorylation
CUJ91_RS01075	COG5001	Diguanylate cyclase
CUJ91_RS01085	COG0840	transmembrane signaling receptor activity
CUJ91_RS01090	COG2233	PERMEase
CUJ91_RS01095	COG0025	NhaP-type Na H and K H
CUJ91_RS01100	COG2200	EAL domain
CUJ91_RS01100	COG2199	diguanylate cyclase activity
CUJ91_RS01140	COG1609	Transcriptional regulator
CUJ91_RS01165	COG0583	DNA-binding transcription factor activity
CUJ91_RS01170	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CUJ91_RS01170	COG1703	isobutyryl-CoA mutase activity
CUJ91_RS01170	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CUJ91_RS01180	COG0596	Alpha beta hydrolase
CUJ91_RS01220	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CUJ91_RS01235	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CUJ91_RS01240	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CUJ91_RS01245	COG0156	8-amino-7-oxononanoate synthase activity
CUJ91_RS01285	COG3012	SEC-C Motif Domain Protein
CUJ91_RS01290	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS01300	COG0183	Belongs to the thiolase family
CUJ91_RS01305	COG0288	reversible hydration of carbon dioxide
CUJ91_RS01310	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
CUJ91_RS01315	COG0789	Transcriptional regulator
CUJ91_RS01325	COG0747	negative chemotaxis
CUJ91_RS01330	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CUJ91_RS01335	COG0300	oxidoreductase activity
CUJ91_RS01340	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CUJ91_RS01350	COG0018	arginyl-trna synthetase
CUJ91_RS01425	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CUJ91_RS01435	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CUJ91_RS01445	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CUJ91_RS01450	COG1127	ABC transporter
CUJ91_RS01480	COG1686	Belongs to the peptidase S11 family
CUJ91_RS01485	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CUJ91_RS01490	COG2921	Belongs to the UPF0250 family
CUJ91_RS01495	COG0583	DNA-binding transcription factor activity
CUJ91_RS01505	COG0321	lipoyl(octanoyl) transferase activity
CUJ91_RS01520	COG4521	taurine ABC transporter
CUJ91_RS01525	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CUJ91_RS01530	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS01540	COG1283	sodium-dependent phosphate transmembrane transporter activity
CUJ91_RS01545	COG1349	DNA-binding transcription factor activity
CUJ91_RS01550	COG0584	glycerophosphoryl diester phosphodiesterase
CUJ91_RS01570	COG3842	ATPase activity
CUJ91_RS01575	COG1301	dicarboxylic acid transport
CUJ91_RS01580	COG4191	Histidine kinase
CUJ91_RS01605	COG2960	long-chain fatty acid transporting porin activity
CUJ91_RS01620	COG0004	ammonium transporteR
CUJ91_RS01630	COG0189	ligase activity
CUJ91_RS01640	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CUJ91_RS01645	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CUJ91_RS01655	COG0793	Belongs to the peptidase S41A family
CUJ91_RS01660	COG0588	phosphoglycerate mutase activity
CUJ91_RS01665	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CUJ91_RS01670	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CUJ91_RS01675	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CUJ91_RS01680	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CUJ91_RS01685	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CUJ91_RS01695	COG1040	competence protein
CUJ91_RS01700	COG2226	methyltransferase
CUJ91_RS01715	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CUJ91_RS01725	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
CUJ91_RS01755	COG1612	heme a metabolic process
CUJ91_RS01760	COG0109	protoheme IX farnesyltransferase activity
CUJ91_RS01765	COG1999	signal sequence binding
CUJ91_RS01775	COG1464	Belongs to the NlpA lipoprotein family
CUJ91_RS01780	COG1846	Transcriptional regulator
CUJ91_RS01780	COG0456	acetyltransferase
CUJ91_RS01785	COG2188	Transcriptional regulator
CUJ91_RS01790	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CUJ91_RS01795	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CUJ91_RS01800	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CUJ91_RS01800	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CUJ91_RS01810	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CUJ91_RS01825	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CUJ91_RS01835	COG0625	glutathione transferase activity
CUJ91_RS01845	COG0742	ribosomal rna small subunit methyltransferase
CUJ91_RS01850	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CUJ91_RS01855	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CUJ91_RS01865	COG0193	aminoacyl-tRNA hydrolase activity
CUJ91_RS01870	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CUJ91_RS01875	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CUJ91_RS01885	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CUJ91_RS01890	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
CUJ91_RS01900	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CUJ91_RS01905	COG1194	a g-specific adenine glycosylase
CUJ91_RS01915	COG1660	Displays ATPase and GTPase activities
CUJ91_RS01920	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CUJ91_RS01930	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CUJ91_RS01935	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CUJ91_RS01940	COG1137	ATPase activity
CUJ91_RS01955	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CUJ91_RS01970	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CUJ91_RS02010	COG2814	Major facilitator Superfamily
CUJ91_RS02015	COG0629	single-stranded DNA binding
CUJ91_RS02025	COG3344	reverse transcriptase
CUJ91_RS02045	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CUJ91_RS02055	COG2010	Cytochrome c
CUJ91_RS02065	COG0583	DNA-binding transcription factor activity
CUJ91_RS02070	COG2814	Major facilitator Superfamily
CUJ91_RS02075	COG2197	response regulator
CUJ91_RS02085	COG2197	response regulator
CUJ91_RS02090	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CUJ91_RS02115	COG0477	Major facilitator Superfamily
CUJ91_RS02135	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CUJ91_RS02145	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CUJ91_RS02145	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CUJ91_RS02155	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CUJ91_RS02205	COG2226	methyltransferase
CUJ91_RS02220	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CUJ91_RS02240	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CUJ91_RS02250	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CUJ91_RS02265	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS02270	COG1024	Enoyl-CoA hydratase
CUJ91_RS02270	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUJ91_RS02275	COG0183	Belongs to the thiolase family
CUJ91_RS02280	COG1024	Enoyl-CoA hydratase
CUJ91_RS02285	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CUJ91_RS02305	COG0583	DNA-binding transcription factor activity
CUJ91_RS02315	COG5265	(ABC) transporter
CUJ91_RS02320	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CUJ91_RS02330	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CUJ91_RS02335	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CUJ91_RS02340	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CUJ91_RS02345	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CUJ91_RS02370	COG0204	Acyl-transferase
CUJ91_RS02375	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CUJ91_RS02380	COG0751	glycine-tRNA ligase activity
CUJ91_RS02385	COG0752	glycyl-tRNA synthetase alpha subunit
CUJ91_RS02390	COG0069	glutamate synthase activity
CUJ91_RS02395	COG0482	sulfurtransferase activity
CUJ91_RS02440	COG3152	Membrane
CUJ91_RS02455	COG3008	intermembrane lipid transfer
CUJ91_RS02460	COG2995	paraquat-inducible protein a
CUJ91_RS02470	COG3038	cytochrome b561
CUJ91_RS02475	COG2353	YceI-like domain
CUJ91_RS02480	COG2353	YceI-like domain
CUJ91_RS02490	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CUJ91_RS02495	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CUJ91_RS02500	COG1862	Preprotein translocase
CUJ91_RS02505	COG0343	queuine tRNA-ribosyltransferase activity
CUJ91_RS02510	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CUJ91_RS02515	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CUJ91_RS02525	COG0753	catalase activity
CUJ91_RS02530	COG0783	Belongs to the Dps family
CUJ91_RS02535	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CUJ91_RS02550	COG0247	lactate metabolic process
CUJ91_RS02555	COG0277	FAD linked oxidase domain protein
CUJ91_RS02560	COG0277	FAD linked oxidase domain protein
CUJ91_RS02565	COG0277	FAD linked oxidase domain protein
CUJ91_RS02570	COG2096	Adenosyltransferase
CUJ91_RS02590	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CUJ91_RS02595	COG0312	modulator of DNA gyrase
CUJ91_RS02600	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CUJ91_RS02610	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CUJ91_RS02615	COG0497	DNA recombination
CUJ91_RS02620	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CUJ91_RS02625	COG1420	regulation of RNA biosynthetic process
CUJ91_RS02630	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CUJ91_RS02640	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CUJ91_RS02650	COG0443	Heat shock 70 kDa protein
CUJ91_RS02655	COG0484	heat shock protein binding
CUJ91_RS02665	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CUJ91_RS02670	COG1428	Deoxynucleoside kinase
CUJ91_RS02680	COG0617	tRNA 3'-terminal CCA addition
CUJ91_RS02690	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CUJ91_RS02695	COG0628	permease
CUJ91_RS02700	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CUJ91_RS02705	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CUJ91_RS02720	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CUJ91_RS02725	COG0586	Pfam SNARE associated Golgi protein
CUJ91_RS02745	COG2885	chlorophyll binding
CUJ91_RS02750	COG0823	Involved in the tonB-independent uptake of proteins
CUJ91_RS02770	COG0824	Thioesterase
CUJ91_RS02775	COG4221	oxidoreductase activity
CUJ91_RS02785	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CUJ91_RS02830	COG0450	alkyl hydroperoxide reductase
CUJ91_RS02835	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS02865	COG2814	Major facilitator Superfamily
CUJ91_RS02885	COG2985	domain, Protein
CUJ91_RS02890	COG2985	domain, Protein
CUJ91_RS02900	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CUJ91_RS02920	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ91_RS02950	COG2823	Periplasmic or secreted lipoprotein
CUJ91_RS02960	COG0730	response to heat
CUJ91_RS02970	COG0583	DNA-binding transcription factor activity
CUJ91_RS02975	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CUJ91_RS02980	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CUJ91_RS02985	COG2814	Major facilitator Superfamily
CUJ91_RS02995	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS03020	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CUJ91_RS03020	COG0662	Cupin 2, conserved barrel domain protein
CUJ91_RS03030	COG1596	polysaccharide export
CUJ91_RS03040	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CUJ91_RS03045	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS03050	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS03055	COG0297	glycogen (starch) synthase activity
CUJ91_RS03090	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CUJ91_RS03095	COG2244	polysaccharide biosynthetic process
CUJ91_RS03100	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS03130	COG2321	neutral zinc metallopeptidase
CUJ91_RS03180	COG1175	transmembrane transport
CUJ91_RS03185	COG0395	ABC-type sugar transport system, permease component
CUJ91_RS03195	COG3842	ATPase activity
CUJ91_RS03200	COG3842	ATPase activity
CUJ91_RS03205	COG1461	Dihydroxyacetone kinase
CUJ91_RS03210	COG2376	Dihydroxyacetone kinase
CUJ91_RS03215	COG0583	DNA-binding transcription factor activity
CUJ91_RS03220	COG0596	Alpha beta hydrolase
CUJ91_RS03230	COG0066	3-isopropylmalate dehydratase activity
CUJ91_RS03235	COG1301	dicarboxylic acid transport
CUJ91_RS03245	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CUJ91_RS03260	COG0010	Belongs to the arginase family
CUJ91_RS03265	COG1126	abc transporter atp-binding protein
CUJ91_RS03270	COG0765	amino acid transport
CUJ91_RS03275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS03290	COG1733	regulation of RNA biosynthetic process
CUJ91_RS03305	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CUJ91_RS03310	COG0459	protein refolding
CUJ91_RS03315	COG0529	Catalyzes the synthesis of activated sulfate
CUJ91_RS03330	COG1773	rubredoxin
CUJ91_RS03340	COG1678	Uncharacterized ACR, COG1678
CUJ91_RS03345	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CUJ91_RS03350	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CUJ91_RS03355	COG0540	Belongs to the ATCase OTCase family
CUJ91_RS03370	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CUJ91_RS03375	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS03400	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CUJ91_RS03400	COG0662	Cupin 2, conserved barrel domain protein
CUJ91_RS03430	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS03435	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS03440	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CUJ91_RS03440	COG0546	phosphoglycolate phosphatase activity
CUJ91_RS03480	COG0588	phosphoglycerate mutase activity
CUJ91_RS03505	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS03505	COG1216	Glycosyl transferase, family 2
CUJ91_RS03520	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CUJ91_RS03590	COG0840	transmembrane signaling receptor activity
CUJ91_RS03600	COG1215	transferase activity, transferring glycosyl groups
CUJ91_RS03605	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CUJ91_RS03635	COG2194	sulfuric ester hydrolase activity
CUJ91_RS03645	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CUJ91_RS03650	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS03685	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CUJ91_RS03690	COG0830	nickel cation binding
CUJ91_RS03695	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
CUJ91_RS03700	COG0804	urea catabolic process
CUJ91_RS03705	COG0832	Belongs to the urease beta subunit family
CUJ91_RS03710	COG0831	urea catabolic process
CUJ91_RS03720	COG0829	nickel cation binding
CUJ91_RS03730	COG1129	ABC transporter
CUJ91_RS03780	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CUJ91_RS03785	COG1609	Transcriptional regulator
CUJ91_RS03790	COG1129	ABC transporter
CUJ91_RS03795	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS03800	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS03810	COG0673	inositol 2-dehydrogenase activity
CUJ91_RS03825	COG0583	DNA-binding transcription factor activity
CUJ91_RS03830	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CUJ91_RS03840	COG0175	sulfate reduction
CUJ91_RS03850	COG2895	sulfate adenylyltransferase (ATP) activity
CUJ91_RS03855	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CUJ91_RS03855	COG1648	precorrin-2 dehydrogenase activity
CUJ91_RS03875	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CUJ91_RS03890	COG4654	Cytochrome c, class I
CUJ91_RS03900	COG0583	DNA-binding transcription factor activity
CUJ91_RS03905	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CUJ91_RS03935	COG4206	TonB-dependent receptor
CUJ91_RS03945	COG1120	ATPase activity
CUJ91_RS03950	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CUJ91_RS03955	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
CUJ91_RS03965	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CUJ91_RS03985	COG1492	cobalamin metabolic process
CUJ91_RS03990	COG2259	Doxx family
CUJ91_RS04005	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CUJ91_RS04010	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CUJ91_RS04015	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CUJ91_RS04035	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CUJ91_RS04035	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CUJ91_RS04040	COG2885	chlorophyll binding
CUJ91_RS04045	COG0489	protein tyrosine kinase activity
CUJ91_RS04055	COG0717	Belongs to the dCTP deaminase family
CUJ91_RS04070	COG3781	membrane
CUJ91_RS04075	COG0837	glucose binding
CUJ91_RS04075	COG1737	Transcriptional regulator
CUJ91_RS04085	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CUJ91_RS04095	COG1175	transmembrane transport
CUJ91_RS04100	COG0395	ABC-type sugar transport system, permease component
CUJ91_RS04105	COG3842	ATPase activity
CUJ91_RS04115	COG3344	reverse transcriptase
CUJ91_RS04130	COG2860	membrane
CUJ91_RS04135	COG2840	Smr protein MutS2
CUJ91_RS04140	COG0492	ferredoxin-NADP+ reductase activity
CUJ91_RS04145	COG1674	ftsk spoiiie
CUJ91_RS04150	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CUJ91_RS04170	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CUJ91_RS04175	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CUJ91_RS04190	COG0024	Methionine aminopeptidase
CUJ91_RS04200	COG0850	regulation of cytokinetic process
CUJ91_RS04205	COG2894	cell division
CUJ91_RS04210	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CUJ91_RS04230	COG3121	Chaperone
CUJ91_RS04240	COG0038	chloride channel
CUJ91_RS04250	COG0477	Major facilitator Superfamily
CUJ91_RS04260	COG0165	Argininosuccinate lyase
CUJ91_RS04270	COG2226	methyltransferase
CUJ91_RS04275	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CUJ91_RS04280	COG0181	hydroxymethylbilane synthase activity
CUJ91_RS04345	COG1136	(ABC) transporter
CUJ91_RS04370	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS04375	COG2271	Major facilitator Superfamily
CUJ91_RS04390	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CUJ91_RS04400	COG2827	Endonuclease containing a URI domain
CUJ91_RS04410	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CUJ91_RS04410	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CUJ91_RS04435	COG4215	(ABC) transporter
CUJ91_RS04445	COG1741	Belongs to the pirin family
CUJ91_RS04475	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ91_RS04480	COG1116	anion transmembrane transporter activity
CUJ91_RS04495	COG2204	response regulator
CUJ91_RS04510	COG2204	response regulator
CUJ91_RS04525	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
CUJ91_RS04530	COG2814	Major facilitator Superfamily
CUJ91_RS04535	COG1881	PFAM PEBP family protein
CUJ91_RS04540	COG3727	T/G mismatch-specific endonuclease activity
CUJ91_RS04560	COG0583	DNA-binding transcription factor activity
CUJ91_RS04570	COG0765	amino acid transport
CUJ91_RS04575	COG0765	amino acid transport
CUJ91_RS04620	COG0625	glutathione transferase activity
CUJ91_RS04670	COG3311	Transcriptional regulator
CUJ91_RS04890	COG0582	viral genome integration into host DNA
CUJ91_RS04900	COG1773	rubredoxin
CUJ91_RS04910	COG0488	(ABC) transporter
CUJ91_RS04930	COG2059	Chromate
CUJ91_RS04950	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ91_RS04960	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ91_RS04965	COG0326	Molecular chaperone. Has ATPase activity
CUJ91_RS04980	COG0457	Tetratricopeptide repeat
CUJ91_RS04980	COG0859	PFAM glycosyl transferase family 9
CUJ91_RS04990	COG3161	chorismate lyase activity
CUJ91_RS05025	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CUJ91_RS05030	COG3135	benzoate transporter
CUJ91_RS05060	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CUJ91_RS05065	COG2878	Part of a membrane complex involved in electron transport
CUJ91_RS05070	COG1309	transcriptional regulator
CUJ91_RS05080	COG3387	PFAM Glycoside hydrolase 15-related
CUJ91_RS05095	COG2706	6-phosphogluconolactonase activity
CUJ91_RS05100	COG1674	ftsk spoiiie
CUJ91_RS05100	COG1674	ftsk spoiiie
CUJ91_RS05110	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CUJ91_RS05130	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS05140	COG0513	Belongs to the DEAD box helicase family
CUJ91_RS05150	COG1054	Belongs to the UPF0176 family
CUJ91_RS05165	COG1132	(ABC) transporter
CUJ91_RS05195	COG1956	GAF domain-containing protein
CUJ91_RS05205	COG3609	addiction module antidote protein, CC2985 family
CUJ91_RS05220	COG2201	protein-glutamate methylesterase activity
CUJ91_RS05245	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CUJ91_RS05250	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CUJ91_RS05270	COG1560	Kdo2-lipid A biosynthetic process
CUJ91_RS05285	COG0477	Major facilitator Superfamily
CUJ91_RS05290	COG0583	DNA-binding transcription factor activity
CUJ91_RS05320	COG0251	oxidation-reduction process
CUJ91_RS05325	COG0583	DNA-binding transcription factor activity
CUJ91_RS05340	COG0583	DNA-binding transcription factor activity
CUJ91_RS05365	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUJ91_RS05420	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CUJ91_RS05420	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CUJ91_RS05425	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS05430	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ91_RS05455	COG4191	Histidine kinase
CUJ91_RS05460	COG4566	intracellular signal transduction
CUJ91_RS05470	COG0642	Histidine kinase
CUJ91_RS05510	COG3842	ATPase activity
CUJ91_RS05525	COG2072	flavoprotein involved in K transport
CUJ91_RS05545	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CUJ91_RS05565	COG1116	anion transmembrane transporter activity
CUJ91_RS05570	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS05580	COG0154	amidase activity
CUJ91_RS05605	COG0583	DNA-binding transcription factor activity
CUJ91_RS05610	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS05615	COG2271	Major facilitator Superfamily
CUJ91_RS05620	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ91_RS05630	COG1530	ribonuclease E activity
CUJ91_RS05635	COG0424	maF-like protein
CUJ91_RS05640	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CUJ91_RS05645	COG0799	negative regulation of ribosome biogenesis
CUJ91_RS05655	COG0408	coproporphyrinogen oxidase activity
CUJ91_RS05660	COG0151	Belongs to the GarS family
CUJ91_RS05665	COG0217	transcriptional regulatory protein
CUJ91_RS05670	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CUJ91_RS05675	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS05680	COG1803	Methylglyoxal synthase
CUJ91_RS05700	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CUJ91_RS05705	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CUJ91_RS05710	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CUJ91_RS05715	COG2205	protein histidine kinase activity
CUJ91_RS05720	COG0745	RESPONSE REGULATOR receiver
CUJ91_RS05725	COG2076	Multidrug Resistance protein
CUJ91_RS05735	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CUJ91_RS05750	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CUJ91_RS05755	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS05765	COG1309	transcriptional regulator
CUJ91_RS05775	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS05805	COG0028	Belongs to the TPP enzyme family
CUJ91_RS05815	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CUJ91_RS05820	COG0688	phosphatidylethanolamine metabolic process
CUJ91_RS05825	COG1183	phosphatidylcholine synthase activity
CUJ91_RS05830	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CUJ91_RS05835	COG0659	secondary active sulfate transmembrane transporter activity
CUJ91_RS05840	COG0288	reversible hydration of carbon dioxide
CUJ91_RS05850	COG0683	leucine binding
CUJ91_RS05855	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CUJ91_RS05865	COG1185	polyribonucleotide nucleotidyltransferase activity
CUJ91_RS05870	COG0604	alcohol dehydrogenase
CUJ91_RS05870	COG4221	oxidoreductase activity
CUJ91_RS05870	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CUJ91_RS05870	COG3321	synthase
CUJ91_RS05875	COG0149	triose-phosphate isomerase activity
CUJ91_RS05890	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CUJ91_RS05895	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CUJ91_RS05900	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CUJ91_RS05905	COG0649	NAD binding
CUJ91_RS05915	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CUJ91_RS05920	COG1034	ATP synthesis coupled electron transport
CUJ91_RS05925	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CUJ91_RS05930	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CUJ91_RS05940	COG0713	ATP synthesis coupled electron transport
CUJ91_RS05955	COG1007	ATP synthesis coupled electron transport
CUJ91_RS05985	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS05990	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS06005	COG0625	glutathione transferase activity
CUJ91_RS06010	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS06025	COG1024	Enoyl-CoA hydratase
CUJ91_RS06030	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUJ91_RS06040	COG0436	Aminotransferase
CUJ91_RS06050	COG3022	response to hydroperoxide
CUJ91_RS06055	COG2866	Carboxypeptidase
CUJ91_RS06080	COG0628	permease
CUJ91_RS06125	COG0587	DNA-directed DNA polymerase activity
CUJ91_RS06135	COG2608	mercury ion transmembrane transporter activity
CUJ91_RS06140	COG0789	Transcriptional regulator
CUJ91_RS06160	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CUJ91_RS06165	COG0667	Aldo Keto reductase
CUJ91_RS06170	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS06185	COG0556	nucleotide-excision repair
CUJ91_RS06195	COG4633	Protein conserved in bacteria
CUJ91_RS06200	COG0672	)-iron permease
CUJ91_RS06240	COG3344	reverse transcriptase
CUJ91_RS06265	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CUJ91_RS06285	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CUJ91_RS06295	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CUJ91_RS06315	COG0778	Nitroreductase
CUJ91_RS06345	COG1120	ATPase activity
CUJ91_RS06365	COG4774	siderophore transport
CUJ91_RS06380	COG4774	siderophore transport
CUJ91_RS06400	COG0784	Response regulator, receiver
CUJ91_RS06400	COG0835	chemotaxis
CUJ91_RS06410	COG0667	Aldo Keto reductase
CUJ91_RS06415	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS06420	COG0583	DNA-binding transcription factor activity
CUJ91_RS06425	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CUJ91_RS06450	COG5487	UPF0391 membrane protein
CUJ91_RS06455	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CUJ91_RS06465	COG1215	transferase activity, transferring glycosyl groups
CUJ91_RS06495	COG1473	amidohydrolase
CUJ91_RS06515	COG2252	PERMEase
CUJ91_RS06530	COG0583	DNA-binding transcription factor activity
CUJ91_RS06535	COG2986	histidine ammonia-lyase
CUJ91_RS06545	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CUJ91_RS06555	COG1228	amidohydrolase
CUJ91_RS06560	COG0402	S-adenosylhomocysteine deaminase activity
CUJ91_RS06590	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
CUJ91_RS06600	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CUJ91_RS06605	COG0596	Alpha beta hydrolase
CUJ91_RS06635	COG1902	pentaerythritol trinitrate reductase activity
CUJ91_RS06645	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS06655	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ91_RS06660	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ91_RS06680	COG0583	DNA-binding transcription factor activity
CUJ91_RS06685	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ91_RS06700	COG1752	Esterase of the alpha-beta hydrolase superfamily
CUJ91_RS06710	COG4160	amino acid transport
CUJ91_RS06725	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CUJ91_RS06740	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS06745	COG3724	N-succinylarginine dihydrolase activity
CUJ91_RS06750	COG2988	succinylglutamate desuccinylase activity
CUJ91_RS06775	COG2202	Pas domain
CUJ91_RS06775	COG2200	EAL domain
CUJ91_RS06775	COG2199	diguanylate cyclase activity
CUJ91_RS06800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ91_RS06810	COG0798	PFAM Bile acid sodium symporter
CUJ91_RS06855	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CUJ91_RS06860	COG0004	ammonium transporteR
CUJ91_RS06865	COG4251	negative regulation of phosphorylation
CUJ91_RS06875	COG0693	protein deglycase activity
CUJ91_RS06885	COG1959	2 iron, 2 sulfur cluster binding
CUJ91_RS06895	COG0668	transmembrane transport
CUJ91_RS06905	COG1522	sequence-specific DNA binding
CUJ91_RS06910	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS06930	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CUJ91_RS06935	COG1074	ATP-dependent DNA helicase activity
CUJ91_RS06940	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CUJ91_RS06955	COG2200	EAL domain
CUJ91_RS06980	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CUJ91_RS07000	COG0583	DNA-binding transcription factor activity
CUJ91_RS07005	COG0436	Aminotransferase
CUJ91_RS07010	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CUJ91_RS07020	COG0779	Required for maturation of 30S ribosomal subunits
CUJ91_RS07025	COG2251	uridine kinase activity
CUJ91_RS07025	COG0195	Participates in both transcription termination and antitermination
CUJ91_RS07030	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CUJ91_RS07035	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CUJ91_RS07055	COG2271	Major facilitator Superfamily
CUJ91_RS07090	COG1024	Enoyl-CoA hydratase
CUJ91_RS07105	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ91_RS07125	COG3226	Transcriptional regulator
CUJ91_RS07130	COG1764	response to oxidative stress
CUJ91_RS07140	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ91_RS07145	COG3493	citrate carrier protein
CUJ91_RS07150	COG4191	Histidine kinase
CUJ91_RS07155	COG2204	response regulator
CUJ91_RS07165	COG2146	nitrite reductase [NAD(P)H] activity
CUJ91_RS07170	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CUJ91_RS07175	COG0243	molybdopterin cofactor binding
CUJ91_RS07205	COG2207	Transcriptional regulator
CUJ91_RS07215	COG1064	alcohol dehydrogenase
CUJ91_RS07220	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS07225	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS07230	COG1129	ABC transporter
CUJ91_RS07235	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS07240	COG1609	Transcriptional regulator
CUJ91_RS07255	COG1846	Transcriptional regulator
CUJ91_RS07260	COG1846	Transcriptional regulator
CUJ91_RS07270	COG1566	PFAM secretion protein HlyD family protein
CUJ91_RS07275	COG2814	Major facilitator Superfamily
CUJ91_RS07285	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS07310	COG1414	Transcriptional regulator
CUJ91_RS07315	COG0656	L-ascorbic acid biosynthetic process
CUJ91_RS07320	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ91_RS07325	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS07340	COG4166	transmembrane transport
CUJ91_RS07345	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS07350	COG0702	epimerase
CUJ91_RS07355	COG0583	DNA-binding transcription factor activity
CUJ91_RS07370	COG3485	protocatechuate 3,4-dioxygenase
CUJ91_RS07380	COG2084	Dehydrogenase
CUJ91_RS07385	COG1063	alcohol dehydrogenase
CUJ91_RS07395	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS07400	COG1129	ABC transporter
CUJ91_RS07405	COG4213	ABC transporter substrate-binding protein
CUJ91_RS07420	COG0477	Major facilitator Superfamily
CUJ91_RS07435	COG2271	Major facilitator Superfamily
CUJ91_RS07445	COG1024	Enoyl-CoA hydratase
CUJ91_RS07455	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CUJ91_RS07485	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CUJ91_RS07490	COG2271	Major facilitator Superfamily
CUJ91_RS07495	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CUJ91_RS07500	COG1609	Transcriptional regulator
CUJ91_RS07505	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CUJ91_RS07510	COG1126	abc transporter atp-binding protein
CUJ91_RS07550	COG0583	DNA-binding transcription factor activity
CUJ91_RS07565	COG0667	Aldo Keto reductase
CUJ91_RS07590	COG0557	exoribonuclease II activity
CUJ91_RS07595	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CUJ91_RS07600	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CUJ91_RS07625	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CUJ91_RS07645	COG1802	Transcriptional regulator
CUJ91_RS07650	COG0673	inositol 2-dehydrogenase activity
CUJ91_RS07655	COG0765	amino acid transport
CUJ91_RS07660	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS07665	COG0167	dihydroorotate dehydrogenase activity
CUJ91_RS07670	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CUJ91_RS07675	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CUJ91_RS07690	COG4702	Belongs to the UPF0303 family
CUJ91_RS07730	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ91_RS07735	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS07740	COG1116	anion transmembrane transporter activity
CUJ91_RS07775	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CUJ91_RS07805	COG3530	Putative quorum-sensing-regulated virulence factor
CUJ91_RS07810	COG0667	Aldo Keto reductase
CUJ91_RS07825	COG1131	(ABC) transporter
CUJ91_RS07845	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CUJ91_RS07850	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CUJ91_RS07855	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CUJ91_RS07860	COG4208	sulfate ABC transporter
CUJ91_RS07865	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CUJ91_RS07870	COG0583	DNA-binding transcription factor activity
CUJ91_RS07875	COG0252	asparaginase activity
CUJ91_RS07885	COG2084	Dehydrogenase
CUJ91_RS07890	COG3622	Belongs to the hyi family
CUJ91_RS07895	COG3960	tartronate-semialdehyde synthase activity
CUJ91_RS07900	COG0583	DNA-binding transcription factor activity
CUJ91_RS07915	COG0360	Binds together with S18 to 16S ribosomal RNA
CUJ91_RS07925	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CUJ91_RS07930	COG0359	binds to the 23S rRNA
CUJ91_RS07945	COG0306	phosphate transporter
CUJ91_RS07950	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS07955	COG0791	NLP P60 protein
CUJ91_RS07960	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CUJ91_RS07965	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CUJ91_RS07970	COG0726	polysaccharide deacetylase
CUJ91_RS07975	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CUJ91_RS07975	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS07985	COG0463	Glycosyl transferase, family 2
CUJ91_RS07990	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CUJ91_RS07995	COG2076	Multidrug Resistance protein
CUJ91_RS08000	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CUJ91_RS08010	COG0436	Aminotransferase
CUJ91_RS08025	COG0303	'Molybdopterin
CUJ91_RS08030	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CUJ91_RS08035	COG0314	molybdopterin synthase activity
CUJ91_RS08040	COG2346	COG2346, Truncated hemoglobins
CUJ91_RS08045	COG1959	2 iron, 2 sulfur cluster binding
CUJ91_RS08050	COG0542	response to heat
CUJ91_RS08055	COG3753	Protein conserved in bacteria
CUJ91_RS08075	COG0534	Mate efflux family protein
CUJ91_RS08085	COG0254	rRNA binding
CUJ91_RS08090	COG3228	Belongs to the MtfA family
CUJ91_RS08100	COG0789	Transcriptional regulator
CUJ91_RS08105	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CUJ91_RS08120	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CUJ91_RS08125	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CUJ91_RS08130	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CUJ91_RS08135	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CUJ91_RS08150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS08160	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CUJ91_RS08185	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CUJ91_RS08195	COG0564	pseudouridine synthase activity
CUJ91_RS08205	COG3243	poly(R)-hydroxyalkanoic acid synthase
CUJ91_RS08210	COG0183	Belongs to the thiolase family
CUJ91_RS08215	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS08225	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CUJ91_RS08230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ91_RS08235	COG0183	Belongs to the thiolase family
CUJ91_RS08245	COG0626	cystathionine gamma-synthase activity
CUJ91_RS08255	COG0560	Phosphoserine phosphatase
CUJ91_RS08260	COG2124	cytochrome p450
CUJ91_RS08265	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CUJ91_RS08280	COG0583	DNA-binding transcription factor activity
CUJ91_RS08295	COG0390	transport system, permease component
CUJ91_RS08300	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CUJ91_RS08305	COG2982	Protein involved in outer membrane biogenesis
CUJ91_RS08315	COG4251	negative regulation of phosphorylation
CUJ91_RS08325	COG5002	protein histidine kinase activity
CUJ91_RS08330	COG1970	mechanosensitive ion channel activity
CUJ91_RS08345	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CUJ91_RS08350	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CUJ91_RS08355	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CUJ91_RS08360	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUJ91_RS08365	COG0450	alkyl hydroperoxide reductase
CUJ91_RS08430	COG1929	Belongs to the glycerate kinase type-1 family
CUJ91_RS08435	COG0544	peptidyl-prolyl cis-trans isomerase activity
CUJ91_RS08440	COG0740	serine-type endopeptidase activity
CUJ91_RS08445	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CUJ91_RS08450	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CUJ91_RS08465	COG0477	Major facilitator Superfamily
CUJ91_RS08515	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS08560	COG4181	ATPase activity
CUJ91_RS08565	COG0166	Belongs to the GPI family
CUJ91_RS08570	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CUJ91_RS08570	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CUJ91_RS08575	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS08580	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CUJ91_RS08580	COG0047	phosphoribosylformylglycinamidine synthase activity
CUJ91_RS08585	COG1396	sequence-specific DNA binding
CUJ91_RS08595	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CUJ91_RS08605	COG2917	probably involved in intracellular septation
CUJ91_RS08610	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CUJ91_RS08615	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CUJ91_RS08620	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ91_RS08625	COG1024	Enoyl-CoA hydratase
CUJ91_RS08625	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUJ91_RS08630	COG0183	Belongs to the thiolase family
CUJ91_RS08645	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ91_RS08655	COG2130	NADP-dependent
CUJ91_RS08665	COG0657	acetylesterase activity
CUJ91_RS08680	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CUJ91_RS08685	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CUJ91_RS08695	COG1247	-acetyltransferase
CUJ91_RS08700	COG0084	hydrolase, TatD family'
CUJ91_RS08720	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
CUJ91_RS08725	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CUJ91_RS08730	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS08765	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CUJ91_RS08775	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CUJ91_RS08780	COG1596	polysaccharide export
CUJ91_RS08785	COG3206	protein involved in exopolysaccharide biosynthesis
CUJ91_RS08785	COG0489	protein tyrosine kinase activity
CUJ91_RS08805	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS08810	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS08820	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CUJ91_RS08855	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CUJ91_RS08860	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CUJ91_RS08865	COG3193	protein, possibly involved in utilization of glycolate and propanediol
CUJ91_RS08870	COG0633	Ferredoxin
CUJ91_RS08870	COG3217	Mosc domain protein beta barrel domain protein
CUJ91_RS08885	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CUJ91_RS08890	COG2146	nitrite reductase [NAD(P)H] activity
CUJ91_RS08895	COG2223	nitrite transmembrane transporter activity
CUJ91_RS08905	COG1285	pathogenesis
CUJ91_RS08910	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS08915	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS08920	COG2223	nitrite transmembrane transporter activity
CUJ91_RS08925	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ91_RS08945	COG0625	glutathione transferase activity
CUJ91_RS08950	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CUJ91_RS08955	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CUJ91_RS08975	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CUJ91_RS08990	COG1309	transcriptional regulator
CUJ91_RS08995	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS09005	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CUJ91_RS09005	COG0519	Catalyzes the synthesis of GMP from XMP
CUJ91_RS09010	COG0174	glutamine synthetase
CUJ91_RS09025	COG0583	DNA-binding transcription factor activity
CUJ91_RS09030	COG1253	flavin adenine dinucleotide binding
CUJ91_RS09040	COG2271	Major facilitator Superfamily
CUJ91_RS09045	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUJ91_RS09050	COG0583	DNA-binding transcription factor activity
CUJ91_RS09060	COG0583	DNA-binding transcription factor activity
CUJ91_RS09075	COG1234	tRNA 3'-trailer cleavage
CUJ91_RS09115	COG0783	Belongs to the Dps family
CUJ91_RS09140	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS09155	COG1349	DNA-binding transcription factor activity
CUJ91_RS09175	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS09185	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS09190	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CUJ91_RS09200	COG0443	Heat shock 70 kDa protein
CUJ91_RS09205	COG0443	Heat shock 70 kDa protein
CUJ91_RS09210	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUJ91_RS09215	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CUJ91_RS09225	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS09240	COG1278	Cold shock
CUJ91_RS09260	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
CUJ91_RS09265	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS09300	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CUJ91_RS09310	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CUJ91_RS09310	COG0392	lysyltransferase activity
CUJ91_RS09320	COG0477	Major facilitator Superfamily
CUJ91_RS09325	COG2323	membrane
CUJ91_RS09340	COG1845	cytochrome c oxidase, subunit III
CUJ91_RS09345	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CUJ91_RS09350	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CUJ91_RS09360	COG0492	ferredoxin-NADP+ reductase activity
CUJ91_RS09365	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUJ91_RS09370	COG0477	Major facilitator Superfamily
CUJ91_RS09380	COG0583	DNA-binding transcription factor activity
CUJ91_RS09385	COG0463	Glycosyl transferase, family 2
CUJ91_RS09385	COG1216	Glycosyl transferase, family 2
CUJ91_RS09395	COG0477	Major facilitator Superfamily
CUJ91_RS09405	COG2719	SpoVR family
CUJ91_RS09410	COG2718	Belongs to the UPF0229 family
CUJ91_RS09415	COG2766	serine protein kinase
CUJ91_RS09425	COG3971	2-oxopent-4-enoate hydratase activity
CUJ91_RS09430	COG0840	transmembrane signaling receptor activity
CUJ91_RS09435	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ91_RS09440	COG1609	Transcriptional regulator
CUJ91_RS09445	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS09450	COG1129	ABC transporter
CUJ91_RS09455	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS09460	COG0598	Magnesium transport protein CorA
CUJ91_RS09480	COG0583	DNA-binding transcription factor activity
CUJ91_RS09505	COG1609	Transcriptional regulator
CUJ91_RS09510	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUJ91_RS09520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ91_RS09535	COG2855	membrane
CUJ91_RS09545	COG0038	chloride channel
CUJ91_RS09565	COG0662	Cupin 2, conserved barrel domain protein
CUJ91_RS09590	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CUJ91_RS09625	COG1309	transcriptional regulator
CUJ91_RS09640	COG0840	transmembrane signaling receptor activity
CUJ91_RS09645	COG1177	transmembrane transport
CUJ91_RS09650	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ91_RS09655	COG3842	ATPase activity
CUJ91_RS09660	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CUJ91_RS09665	COG1914	H( )-stimulated, divalent metal cation uptake system
CUJ91_RS09685	COG3047	cAMP biosynthetic process
CUJ91_RS09690	COG2070	2-Nitropropane dioxygenase
CUJ91_RS09705	COG0488	(ABC) transporter
CUJ91_RS09710	COG3360	Dodecin
CUJ91_RS09720	COG1079	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS09725	COG4603	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS09730	COG3845	ABC transporter
CUJ91_RS09765	COG4266	Belongs to the allantoicase family
CUJ91_RS09770	COG3648	Uricase
CUJ91_RS09770	COG3195	allantoin biosynthetic process
CUJ91_RS09785	COG1953	Uracil, thiamine, allantoin
CUJ91_RS09790	COG1802	Transcriptional regulator
CUJ91_RS09795	COG1619	proteins homologs of microcin C7 resistance protein MccF
CUJ91_RS09800	COG0590	tRNA wobble adenosine to inosine editing
CUJ91_RS09825	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CUJ91_RS09845	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUJ91_RS09850	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
CUJ91_RS09855	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CUJ91_RS09880	COG4753	response regulator
CUJ91_RS09880	COG2207	Transcriptional regulator
CUJ91_RS09885	COG2814	Major facilitator Superfamily
CUJ91_RS09915	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ91_RS09940	COG1595	DNA-templated transcription, initiation
CUJ91_RS09945	COG1923	regulation of RNA biosynthetic process
CUJ91_RS09965	COG2204	response regulator
CUJ91_RS10005	COG4964	Belongs to the GSP D family
CUJ91_RS10055	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CUJ91_RS10060	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CUJ91_RS10065	COG0508	dehydrogenase complex catalyzes the overall conversion of
CUJ91_RS10070	COG0567	Dehydrogenase, E1 component
CUJ91_RS10085	COG1538	Outer membrane efflux protein
CUJ91_RS10090	COG1566	PFAM secretion protein HlyD family protein
CUJ91_RS10095	COG2814	Major facilitator Superfamily
CUJ91_RS10100	COG2031	fatty acid transporter
CUJ91_RS10105	COG2423	ornithine cyclodeaminase activity
CUJ91_RS10115	COG0583	DNA-binding transcription factor activity
CUJ91_RS10135	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CUJ91_RS10135	COG0519	Catalyzes the synthesis of GMP from XMP
CUJ91_RS10155	COG0697	spore germination
CUJ91_RS10160	COG2914	Belongs to the UPF0125 (RnfH) family
CUJ91_RS10170	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CUJ91_RS10175	COG0330	HflC and HflK could
CUJ91_RS10190	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CUJ91_RS10195	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CUJ91_RS10200	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CUJ91_RS10205	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CUJ91_RS10210	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CUJ91_RS10220	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CUJ91_RS10235	COG0750	zinc metalloprotease
CUJ91_RS10240	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CUJ91_RS10250	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CUJ91_RS10255	COG0233	cytoplasmic translational termination
CUJ91_RS10260	COG0528	UMP kinase activity
CUJ91_RS10265	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CUJ91_RS10270	COG0052	Belongs to the universal ribosomal protein uS2 family
CUJ91_RS10275	COG0024	Methionine aminopeptidase
CUJ91_RS10290	COG1187	pseudouridine synthase activity
CUJ91_RS10295	COG0242	peptide deformylase activity
CUJ91_RS10300	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CUJ91_RS10325	COG2171	N-acyltransferase activity
CUJ91_RS10330	COG1393	Belongs to the ArsC family
CUJ91_RS10335	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CUJ91_RS10340	COG2890	protein-(glutamine-N5) methyltransferase activity
CUJ91_RS10350	COG0386	Belongs to the glutathione peroxidase family
CUJ91_RS10355	COG0488	(ABC) transporter
CUJ91_RS10360	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CUJ91_RS10375	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CUJ91_RS10380	COG0477	Major facilitator Superfamily
CUJ91_RS10385	COG0351	phosphomethylpyrimidine kinase
CUJ91_RS10395	COG1573	uracil-dna glycosylase
CUJ91_RS10405	COG1214	PFAM Peptidase M22, glycoprotease
CUJ91_RS10415	COG0513	Belongs to the DEAD box helicase family
CUJ91_RS10425	COG2224	Isocitrate lyase
CUJ91_RS10435	COG0583	DNA-binding transcription factor activity
CUJ91_RS10445	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CUJ91_RS10450	COG2105	PFAM AIG2 family protein
CUJ91_RS10490	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CUJ91_RS10495	COG1752	Esterase of the alpha-beta hydrolase superfamily
CUJ91_RS10500	COG0791	NLP P60 protein
CUJ91_RS10505	COG4172	Belongs to the ABC transporter superfamily
CUJ91_RS10510	COG4239	(ABC) transporter, permease
CUJ91_RS10515	COG4174	ABC transporter (Permease)
CUJ91_RS10520	COG4166	transmembrane transport
CUJ91_RS10530	COG2271	Major facilitator Superfamily
CUJ91_RS10535	COG1501	Belongs to the glycosyl hydrolase 31 family
CUJ91_RS10545	COG2188	Transcriptional regulator
CUJ91_RS10550	COG1053	succinate dehydrogenase
CUJ91_RS10570	COG0625	glutathione transferase activity
CUJ91_RS10580	COG0028	Belongs to the TPP enzyme family
CUJ91_RS10590	COG4191	Histidine kinase
CUJ91_RS10600	COG0492	ferredoxin-NADP+ reductase activity
CUJ91_RS10610	COG4566	intracellular signal transduction
CUJ91_RS10630	COG0596	Alpha beta hydrolase
CUJ91_RS10640	COG2514	catechol 2,3-dioxygenase activity
CUJ91_RS10645	COG0656	L-ascorbic acid biosynthetic process
CUJ91_RS10655	COG0028	Belongs to the TPP enzyme family
CUJ91_RS10670	COG3663	DNA glycosylase
CUJ91_RS10675	COG0583	DNA-binding transcription factor activity
CUJ91_RS10725	COG1129	ABC transporter
CUJ91_RS10735	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS10740	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS10745	COG1129	ABC transporter
CUJ91_RS10750	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CUJ91_RS10755	COG0459	protein refolding
CUJ91_RS10760	COG0765	amino acid transport
CUJ91_RS10765	COG0765	amino acid transport
CUJ91_RS10770	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS10785	COG5507	3-demethylubiquinone-9 3-methyltransferase
CUJ91_RS10795	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
CUJ91_RS10800	COG4221	oxidoreductase activity
CUJ91_RS10810	COG0492	ferredoxin-NADP+ reductase activity
CUJ91_RS10815	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CUJ91_RS10820	COG3386	PFAM SMP-30 Gluconolaconase
CUJ91_RS10825	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUJ91_RS10830	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS10835	COG1129	ABC transporter
CUJ91_RS10855	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS10870	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS10880	COG2986	histidine ammonia-lyase
CUJ91_RS10890	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ91_RS10910	COG2271	Major facilitator Superfamily
CUJ91_RS10915	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CUJ91_RS10930	COG1024	Enoyl-CoA hydratase
CUJ91_RS10935	COG4670	ketone body catabolic process
CUJ91_RS10940	COG2271	Major facilitator Superfamily
CUJ91_RS10955	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS10960	COG0583	DNA-binding transcription factor activity
CUJ91_RS11005	COG3459	Glycosyltransferase 36 associated
CUJ91_RS11020	COG0671	phosphoesterase, PA-phosphatase related
CUJ91_RS11030	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS11035	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CUJ91_RS11070	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ91_RS11075	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS11080	COG1116	anion transmembrane transporter activity
CUJ91_RS11105	COG1595	DNA-templated transcription, initiation
CUJ91_RS11155	COG2814	Major facilitator Superfamily
CUJ91_RS11170	COG1309	transcriptional regulator
CUJ91_RS11200	COG0625	glutathione transferase activity
CUJ91_RS11265	COG0527	aspartate kinase activity
CUJ91_RS11270	COG0037	tRNA processing
CUJ91_RS11275	COG0825	malonyl-CoA metabolic process
CUJ91_RS11285	COG0215	cysteine-tRNA ligase activity
CUJ91_RS11295	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CUJ91_RS11300	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CUJ91_RS11305	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CUJ91_RS11310	COG1045	serine acetyltransferase
CUJ91_RS11320	COG0483	inositol monophosphate 1-phosphatase activity
CUJ91_RS11340	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CUJ91_RS11355	COG2850	peptidyl-arginine hydroxylation
CUJ91_RS11370	COG1199	ATP-dependent helicase activity
CUJ91_RS11385	COG2183	response to ionizing radiation
CUJ91_RS11390	COG3158	transport of potassium into the cell
CUJ91_RS11395	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
CUJ91_RS11400	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CUJ91_RS11405	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CUJ91_RS11420	COG0330	HflC and HflK could
CUJ91_RS11425	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CUJ91_RS11430	COG1923	regulation of RNA biosynthetic process
CUJ91_RS11435	COG1160	GTP binding
CUJ91_RS11440	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CUJ91_RS11450	COG0124	histidyl-tRNA synthetase
CUJ91_RS11455	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CUJ91_RS11465	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CUJ91_RS11470	COG0105	UTP biosynthetic process
CUJ91_RS11480	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CUJ91_RS11485	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CUJ91_RS11490	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ91_RS11500	COG0180	Tryptophanyl-tRNA synthetase
CUJ91_RS11505	COG1994	Peptidase M50
CUJ91_RS11510	COG0009	L-threonylcarbamoyladenylate synthase
CUJ91_RS11515	COG0613	PHP domain protein
CUJ91_RS11520	COG0596	Alpha beta hydrolase
CUJ91_RS11525	COG2833	Protein of unknown function (DUF455)
CUJ91_RS11535	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CUJ91_RS11545	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CUJ91_RS11550	COG0148	phosphopyruvate hydratase activity
CUJ91_RS11555	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CUJ91_RS11560	COG0504	CTP synthase activity
CUJ91_RS11565	COG2267	carboxylic ester hydrolase activity
CUJ91_RS11570	COG0658	competence protein
CUJ91_RS11570	COG2333	competence protein COMEC
CUJ91_RS11575	COG0084	hydrolase, TatD family'
CUJ91_RS11580	COG1136	(ABC) transporter
CUJ91_RS11595	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CUJ91_RS11605	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CUJ91_RS11615	COG2975	iron-sulfur cluster assembly
CUJ91_RS11625	COG0443	Heat shock 70 kDa protein
CUJ91_RS11630	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CUJ91_RS11635	COG0316	Belongs to the HesB IscA family
CUJ91_RS11640	COG0822	iron-sulfur transferase activity
CUJ91_RS11645	COG1104	cysteine desulfurase activity
CUJ91_RS11655	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CUJ91_RS11680	COG1414	Transcriptional regulator
CUJ91_RS11695	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CUJ91_RS11705	COG0508	dehydrogenase complex catalyzes the overall conversion of
CUJ91_RS11710	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CUJ91_RS11720	COG4566	intracellular signal transduction
CUJ91_RS11725	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CUJ91_RS11735	COG0339	signal peptide processing
CUJ91_RS11740	COG0402	S-adenosylhomocysteine deaminase activity
CUJ91_RS11745	COG1794	racemase activity, acting on amino acids and derivatives
CUJ91_RS11765	COG1505	serine-type exopeptidase activity
CUJ91_RS11775	COG3852	Histidine kinase
CUJ91_RS11780	COG0174	glutamine synthetase
CUJ91_RS11790	COG1546	Belongs to the CinA family
CUJ91_RS11790	COG1058	Belongs to the CinA family
CUJ91_RS11835	COG1643	Atp-dependent helicase
CUJ91_RS11840	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CUJ91_RS11840	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CUJ91_RS11845	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
CUJ91_RS11850	COG0477	Major facilitator Superfamily
CUJ91_RS11870	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CUJ91_RS11890	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ91_RS11895	COG0243	molybdopterin cofactor binding
CUJ91_RS11900	COG1451	nucleotide metabolic process
CUJ91_RS11905	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ91_RS11915	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS11920	COG1129	ABC transporter
CUJ91_RS11950	COG1609	Transcriptional regulator
CUJ91_RS11960	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CUJ91_RS11965	COG1177	transmembrane transport
CUJ91_RS11975	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CUJ91_RS11985	COG2814	Major facilitator Superfamily
CUJ91_RS11990	COG2197	response regulator
CUJ91_RS11995	COG2197	response regulator
CUJ91_RS12015	COG4585	Histidine kinase
CUJ91_RS12030	COG0446	pyridine nucleotide-disulphide oxidoreductase
CUJ91_RS12030	COG1902	pentaerythritol trinitrate reductase activity
CUJ91_RS12045	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUJ91_RS12050	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
CUJ91_RS12060	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CUJ91_RS12065	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CUJ91_RS12080	COG1620	l-lactate permease
CUJ91_RS12090	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CUJ91_RS12105	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
CUJ91_RS12115	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CUJ91_RS12120	COG1126	abc transporter atp-binding protein
CUJ91_RS12125	COG0765	amino acid transport
CUJ91_RS12130	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS12140	COG1953	Uracil, thiamine, allantoin
CUJ91_RS12160	COG1309	transcriptional regulator
CUJ91_RS12180	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CUJ91_RS12210	COG3511	phospholipase C
CUJ91_RS12225	COG0583	DNA-binding transcription factor activity
CUJ91_RS12235	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS12240	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS12245	COG0583	DNA-binding transcription factor activity
CUJ91_RS12250	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CUJ91_RS12255	COG2271	Major facilitator Superfamily
CUJ91_RS12270	COG0776	regulation of translation
CUJ91_RS12280	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CUJ91_RS12290	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CUJ91_RS12295	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CUJ91_RS12300	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CUJ91_RS12315	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CUJ91_RS12320	COG0251	oxidation-reduction process
CUJ91_RS12325	COG0596	Alpha beta hydrolase
CUJ91_RS12325	COG2945	thiolester hydrolase activity
CUJ91_RS12350	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS12365	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CUJ91_RS12375	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CUJ91_RS12375	COG0517	IMP dehydrogenase activity
CUJ91_RS12400	COG1295	ribonuclease BN
CUJ91_RS12415	COG0277	FAD linked oxidase domain protein
CUJ91_RS12425	COG0583	DNA-binding transcription factor activity
CUJ91_RS12445	COG1566	PFAM secretion protein HlyD family protein
CUJ91_RS12455	COG2223	nitrite transmembrane transporter activity
CUJ91_RS12460	COG0210	DNA helicase
CUJ91_RS12470	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CUJ91_RS12475	COG0525	valine-tRNA ligase activity
CUJ91_RS12480	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CUJ91_RS12485	COG0425	Belongs to the sulfur carrier protein TusA family
CUJ91_RS12490	COG0673	inositol 2-dehydrogenase activity
CUJ91_RS12495	COG0673	inositol 2-dehydrogenase activity
CUJ91_RS12510	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS12520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ91_RS12525	COG3962	Belongs to the TPP enzyme family
CUJ91_RS12535	COG3718	enzyme involved in inositol metabolism
CUJ91_RS12545	COG0410	ABC transporter
CUJ91_RS12550	COG0411	ABC transporter
CUJ91_RS12565	COG0824	Thioesterase
CUJ91_RS12570	COG2816	NAD+ diphosphatase activity
CUJ91_RS12580	COG0477	Major facilitator Superfamily
CUJ91_RS12590	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CUJ91_RS12595	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CUJ91_RS12610	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CUJ91_RS12615	COG1051	belongs to the nudix hydrolase family
CUJ91_RS12630	COG1858	cytochrome C peroxidase
CUJ91_RS12635	COG3511	phospholipase C
CUJ91_RS12645	COG1968	undecaprenyl-diphosphatase activity
CUJ91_RS12655	COG4942	peptidase
CUJ91_RS12670	COG0534	Mate efflux family protein
CUJ91_RS12700	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CUJ91_RS12710	COG0745	RESPONSE REGULATOR receiver
CUJ91_RS12720	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CUJ91_RS12725	COG0581	inorganic phosphate transmembrane transporter activity
CUJ91_RS12730	COG0573	inorganic phosphate transmembrane transporter activity
CUJ91_RS12735	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CUJ91_RS12750	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CUJ91_RS12760	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CUJ91_RS12765	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CUJ91_RS12770	COG1534	Rna-binding protein
CUJ91_RS12780	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CUJ91_RS12785	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CUJ91_RS12790	COG0505	Belongs to the CarA family
CUJ91_RS12795	COG0741	lytic transglycosylase activity
CUJ91_RS12795	COG1388	LysM domain
CUJ91_RS12800	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ91_RS12805	COG2226	methyltransferase
CUJ91_RS12810	COG0328	RNA-DNA hybrid ribonuclease activity
CUJ91_RS12815	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CUJ91_RS12825	COG1132	(ABC) transporter
CUJ91_RS12840	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS12845	COG1132	(ABC) transporter
CUJ91_RS12850	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
CUJ91_RS12855	COG1877	trehalose-phosphatase activity
CUJ91_RS12880	COG2153	protein acetylation
CUJ91_RS12885	COG5001	Diguanylate cyclase
CUJ91_RS12885	COG3447	MASE1 domain protein
CUJ91_RS12885	COG5002	protein histidine kinase activity
CUJ91_RS12910	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CUJ91_RS12915	COG0322	excinuclease ABC activity
CUJ91_RS12925	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CUJ91_RS12935	COG3237	CsbD-like
CUJ91_RS12940	COG2204	response regulator
CUJ91_RS12945	COG1472	Belongs to the glycosyl hydrolase 3 family
CUJ91_RS12950	COG0736	holo-[acyl-carrier-protein] synthase activity
CUJ91_RS12955	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CUJ91_RS12960	COG1381	Involved in DNA repair and RecF pathway recombination
CUJ91_RS12965	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CUJ91_RS12970	COG0571	ribonuclease III activity
CUJ91_RS12975	COG0681	Belongs to the peptidase S26 family
CUJ91_RS12980	COG0481	GTPase activity
CUJ91_RS12990	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CUJ91_RS13015	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CUJ91_RS13035	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CUJ91_RS13040	COG0416	fatty acid biosynthetic process
CUJ91_RS13050	COG1399	metal-binding, possibly nucleic acid-binding protein
CUJ91_RS13055	COG0424	maF-like protein
CUJ91_RS13065	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CUJ91_RS13065	COG0616	signal peptide processing
CUJ91_RS13075	COG0546	phosphoglycolate phosphatase activity
CUJ91_RS13085	COG1530	ribonuclease E activity
CUJ91_RS13090	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CUJ91_RS13110	COG1322	Protein conserved in bacteria
CUJ91_RS13140	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CUJ91_RS13155	COG3045	CreA protein
CUJ91_RS13165	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CUJ91_RS13180	COG0210	DNA helicase
CUJ91_RS13195	COG2501	S4 domain
CUJ91_RS13200	COG0534	Mate efflux family protein
CUJ91_RS13210	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CUJ91_RS13215	COG0114	fumarate hydratase activity
CUJ91_RS13225	COG4977	sequence-specific DNA binding
CUJ91_RS13245	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CUJ91_RS13260	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CUJ91_RS13265	COG0312	modulator of DNA gyrase
CUJ91_RS13270	COG3028	Belongs to the UPF0307 family
CUJ91_RS13275	COG0521	Mo-molybdopterin cofactor biosynthetic process
CUJ91_RS13280	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CUJ91_RS13290	COG1162	GTPase activity
CUJ91_RS13310	COG0335	large ribosomal subunit rRNA binding
CUJ91_RS13315	COG0336	Belongs to the RNA methyltransferase TrmD family
CUJ91_RS13320	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CUJ91_RS13350	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS13355	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS13375	COG2011	ABC-type metal ion transport system permease component
CUJ91_RS13380	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CUJ91_RS13385	COG2267	carboxylic ester hydrolase activity
CUJ91_RS13390	COG1024	Enoyl-CoA hydratase
CUJ91_RS13395	COG0123	including yeast histone deacetylase and acetoin utilization protein
CUJ91_RS13400	COG2951	lytic endotransglycosylase activity
CUJ91_RS13415	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS13420	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CUJ91_RS13430	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CUJ91_RS13440	COG0776	regulation of translation
CUJ91_RS13450	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CUJ91_RS13460	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CUJ91_RS13470	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CUJ91_RS13490	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CUJ91_RS13495	COG0546	phosphoglycolate phosphatase activity
CUJ91_RS13515	COG1910	domain protein
CUJ91_RS13530	COG3383	formate dehydrogenase (NAD+) activity
CUJ91_RS13545	COG1230	cation diffusion facilitator family transporter
CUJ91_RS13585	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CUJ91_RS13590	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CUJ91_RS13590	COG4651	solute:proton antiporter activity
CUJ91_RS13610	COG0154	amidase activity
CUJ91_RS13615	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CUJ91_RS13640	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CUJ91_RS13645	COG0402	S-adenosylhomocysteine deaminase activity
CUJ91_RS13650	COG0644	oxidoreductase
CUJ91_RS13655	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CUJ91_RS13675	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CUJ91_RS13680	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS13690	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CUJ91_RS13710	COG2986	histidine ammonia-lyase
CUJ91_RS13715	COG0463	Glycosyl transferase, family 2
CUJ91_RS13730	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CUJ91_RS13750	COG2119	membrane
CUJ91_RS13760	COG0308	aminopeptidase N
CUJ91_RS13775	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CUJ91_RS13795	COG2176	DNA-directed DNA polymerase activity
CUJ91_RS13800	COG1278	Cold shock
CUJ91_RS13810	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS13835	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CUJ91_RS13845	COG0194	GDP metabolic process
CUJ91_RS13850	COG1561	YicC-like family, N-terminal region
CUJ91_RS13855	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CUJ91_RS13860	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CUJ91_RS13865	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CUJ91_RS13885	COG2814	Major facilitator Superfamily
CUJ91_RS13895	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CUJ91_RS13900	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CUJ91_RS13900	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CUJ91_RS13915	COG0443	Heat shock 70 kDa protein
CUJ91_RS13940	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CUJ91_RS13945	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CUJ91_RS13950	COG0436	Aminotransferase
CUJ91_RS13960	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CUJ91_RS13995	COG0762	integral membrane protein
CUJ91_RS14010	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CUJ91_RS14015	COG1968	undecaprenyl-diphosphatase activity
CUJ91_RS14060	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ91_RS14070	COG0747	negative chemotaxis
CUJ91_RS14075	COG4172	Belongs to the ABC transporter superfamily
CUJ91_RS14095	COG1187	pseudouridine synthase activity
CUJ91_RS14115	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CUJ91_RS14120	COG0456	acetyltransferase
CUJ91_RS14145	COG0683	leucine binding
CUJ91_RS14150	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CUJ91_RS14155	COG1047	Peptidyl-prolyl cis-trans
CUJ91_RS14160	COG2003	Belongs to the UPF0758 family
CUJ91_RS14165	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CUJ91_RS14170	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CUJ91_RS14175	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CUJ91_RS14195	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
CUJ91_RS14195	COG3264	Mechanosensitive ion channel
CUJ91_RS14200	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CUJ91_RS14200	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CUJ91_RS14205	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CUJ91_RS14210	COG0196	riboflavin kinase activity
CUJ91_RS14215	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CUJ91_RS14220	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CUJ91_RS14225	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CUJ91_RS14230	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ91_RS14235	COG0756	dUTP diphosphatase activity
CUJ91_RS14240	COG0542	response to heat
CUJ91_RS14245	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CUJ91_RS14250	COG1278	Cold shock
CUJ91_RS14285	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CUJ91_RS14295	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CUJ91_RS14300	COG0747	negative chemotaxis
CUJ91_RS14305	COG0601	transmembrane transport
CUJ91_RS14310	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ91_RS14325	COG0656	L-ascorbic acid biosynthetic process
CUJ91_RS14330	COG2188	Transcriptional regulator
CUJ91_RS14335	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CUJ91_RS14355	COG2814	Major facilitator Superfamily
CUJ91_RS14365	COG1595	DNA-templated transcription, initiation
CUJ91_RS14370	COG0740	serine-type endopeptidase activity
CUJ91_RS14395	COG1570	exodeoxyribonuclease VII activity
CUJ91_RS14400	COG1663	tetraacyldisaccharide 4'-kinase activity
CUJ91_RS14405	COG2835	tetraacyldisaccharide 4'-kinase activity
CUJ91_RS14410	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CUJ91_RS14415	COG0563	adenylate kinase activity
CUJ91_RS14430	COG0728	peptidoglycan biosynthetic process
CUJ91_RS14435	COG0268	Binds directly to 16S ribosomal RNA
CUJ91_RS14445	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CUJ91_RS14450	COG0137	argininosuccinate synthase activity
CUJ91_RS14455	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CUJ91_RS14460	COG1666	GTP binding
CUJ91_RS14465	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CUJ91_RS14470	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CUJ91_RS14475	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ91_RS14480	COG4974	Belongs to the 'phage' integrase family
CUJ91_RS14490	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CUJ91_RS14495	COG0802	atpase or kinase
CUJ91_RS14500	COG0860	N-Acetylmuramoyl-L-alanine amidase
CUJ91_RS14520	COG1741	Belongs to the pirin family
CUJ91_RS14530	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CUJ91_RS14540	COG0259	pyridoxamine-phosphate oxidase activity
CUJ91_RS14545	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CUJ91_RS14555	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CUJ91_RS14560	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUJ91_RS14565	COG1522	sequence-specific DNA binding
CUJ91_RS14570	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CUJ91_RS14580	COG3483	tryptophan 2,3-dioxygenase activity
CUJ91_RS14585	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS14590	COG1070	Carbohydrate kinase
CUJ91_RS14595	COG1063	alcohol dehydrogenase
CUJ91_RS14600	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS14610	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS14615	COG1917	Cupin 2, conserved barrel domain protein
CUJ91_RS14615	COG4977	sequence-specific DNA binding
CUJ91_RS14620	COG0246	Mannitol dehydrogenase
CUJ91_RS14625	COG1070	Carbohydrate kinase
CUJ91_RS14630	COG2390	Transcriptional regulator
CUJ91_RS14635	COG3842	ATPase activity
CUJ91_RS14640	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUJ91_RS14650	COG1175	transmembrane transport
CUJ91_RS14665	COG0803	Belongs to the bacterial solute-binding protein 9 family
CUJ91_RS14670	COG1121	(ABC) transporter
CUJ91_RS14675	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CUJ91_RS14700	COG2233	PERMEase
CUJ91_RS14710	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CUJ91_RS14715	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ91_RS14725	COG1335	isochorismatase
CUJ91_RS14730	COG4977	sequence-specific DNA binding
CUJ91_RS14755	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CUJ91_RS14760	COG0642	Histidine kinase
CUJ91_RS14785	COG0009	L-threonylcarbamoyladenylate synthase
CUJ91_RS14790	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CUJ91_RS14795	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CUJ91_RS14800	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CUJ91_RS14810	COG0469	pyruvate kinase activity
CUJ91_RS14815	COG0126	phosphoglycerate kinase activity
CUJ91_RS14840	COG0859	PFAM glycosyl transferase family 9
CUJ91_RS14850	COG0429	hydrolase of the alpha beta-hydrolase fold
CUJ91_RS14865	COG0315	cyclic pyranopterin monophosphate synthase activity
CUJ91_RS14875	COG4969	Belongs to the N-Me-Phe pilin family
CUJ91_RS14880	COG0861	Integral membrane protein TerC family
CUJ91_RS14885	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CUJ91_RS14890	COG0045	succinate-CoA ligase (ADP-forming) activity
CUJ91_RS14900	COG2137	regulation of response to DNA damage stimulus
CUJ91_RS14905	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CUJ91_RS14920	COG0477	Major facilitator Superfamily
CUJ91_RS14935	COG2186	Transcriptional regulator
CUJ91_RS14940	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ91_RS14975	COG1272	protein, Hemolysin III
CUJ91_RS14985	COG0513	Belongs to the DEAD box helicase family
CUJ91_RS15020	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CUJ91_RS15025	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CUJ91_RS15030	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUJ91_RS15040	COG1396	sequence-specific DNA binding
CUJ91_RS15045	COG2814	Major facilitator Superfamily
CUJ91_RS15055	COG0583	DNA-binding transcription factor activity
CUJ91_RS15060	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CUJ91_RS15065	COG1702	phosphate starvation-inducible protein PhoH
CUJ91_RS15070	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CUJ91_RS15075	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CUJ91_RS15085	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CUJ91_RS15090	COG0501	Belongs to the peptidase M48B family
CUJ91_RS15095	COG0625	glutathione transferase activity
CUJ91_RS15100	COG0006	proline dipeptidase activity
CUJ91_RS15105	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CUJ91_RS15110	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CUJ91_RS15115	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CUJ91_RS15120	COG0138	bifunctional purine biosynthesis protein purh
CUJ91_RS15130	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CUJ91_RS15135	COG0632	four-way junction helicase activity
CUJ91_RS15140	COG2255	four-way junction helicase activity
CUJ91_RS15150	COG1490	D-aminoacyl-tRNA deacylase activity
CUJ91_RS15160	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CUJ91_RS15165	COG0316	Belongs to the HesB IscA family
CUJ91_RS15170	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CUJ91_RS15175	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CUJ91_RS15195	COG0418	dihydroorotase activity
CUJ91_RS15200	COG0121	glutamine amidotransferase
CUJ91_RS15205	COG1126	abc transporter atp-binding protein
CUJ91_RS15210	COG0765	amino acid transport
CUJ91_RS15215	COG0765	amino acid transport
CUJ91_RS15225	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CUJ91_RS15230	COG0583	DNA-binding transcription factor activity
CUJ91_RS15240	COG3265	gluconokinase activity
CUJ91_RS15250	COG0800	Aldolase
CUJ91_RS15260	COG1737	Transcriptional regulator
CUJ91_RS15260	COG0837	glucose binding
CUJ91_RS15275	COG1981	membrane
CUJ91_RS15280	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CUJ91_RS15295	COG0495	leucyl-tRNA aminoacylation
CUJ91_RS15315	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CUJ91_RS15320	COG0735	belongs to the Fur family
CUJ91_RS15330	COG4266	Belongs to the allantoicase family
CUJ91_RS15335	COG1301	dicarboxylic acid transport
CUJ91_RS15345	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CUJ91_RS15350	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CUJ91_RS15355	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CUJ91_RS15365	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CUJ91_RS15375	COG4290	ribonuclease
CUJ91_RS15390	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CUJ91_RS15395	COG1546	Belongs to the CinA family
CUJ91_RS15405	COG0284	orotidine-5'-phosphate decarboxylase activity
CUJ91_RS15435	COG1129	ABC transporter
CUJ91_RS15445	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS15450	COG0800	Aldolase
CUJ91_RS15455	COG3734	2-keto-3-deoxy-galactonokinase
CUJ91_RS15460	COG1414	Transcriptional regulator
CUJ91_RS15470	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CUJ91_RS15475	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CUJ91_RS15480	COG0557	exoribonuclease II activity
CUJ91_RS15485	COG3150	esterase
CUJ91_RS15490	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CUJ91_RS15500	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CUJ91_RS15505	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CUJ91_RS15510	COG0511	ligase activity, forming carbon-carbon bonds
CUJ91_RS15515	COG0439	Biotin carboxylase
CUJ91_RS15520	COG2264	protein methyltransferase activity
CUJ91_RS15530	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CUJ91_RS15555	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CUJ91_RS15575	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CUJ91_RS15580	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CUJ91_RS15585	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CUJ91_RS15590	COG2095	MarC family integral membrane protein
CUJ91_RS15595	COG0442	prolyl-tRNA aminoacylation
CUJ91_RS15600	COG0494	nUDIX hydrolase
CUJ91_RS15610	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CUJ91_RS15615	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CUJ91_RS15620	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CUJ91_RS15625	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CUJ91_RS15630	COG0142	geranyltranstransferase activity
CUJ91_RS15640	COG4536	flavin adenine dinucleotide binding
CUJ91_RS15650	COG1459	type II secretion system
CUJ91_RS15655	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CUJ91_RS15665	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
CUJ91_RS15670	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CUJ91_RS15675	COG0494	nUDIX hydrolase
CUJ91_RS15690	COG0653	protein targeting
CUJ91_RS15695	COG3344	reverse transcriptase
CUJ91_RS15710	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CUJ91_RS15715	COG0678	peroxiredoxin activity
CUJ91_RS15730	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CUJ91_RS15735	COG1181	Belongs to the D-alanine--D-alanine ligase family
CUJ91_RS15740	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CUJ91_RS15745	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CUJ91_RS15755	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CUJ91_RS15760	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CUJ91_RS15765	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CUJ91_RS15770	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CUJ91_RS15780	COG3116	cell division
CUJ91_RS15785	COG0275	rRNA processing
CUJ91_RS15790	COG2001	Belongs to the MraZ family
CUJ91_RS15795	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
CUJ91_RS15800	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS15805	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ91_RS15810	COG0243	molybdopterin cofactor binding
CUJ91_RS15815	COG1473	amidohydrolase
CUJ91_RS15850	COG1024	Enoyl-CoA hydratase
CUJ91_RS15860	COG0183	Belongs to the thiolase family
CUJ91_RS15865	COG1024	Enoyl-CoA hydratase
CUJ91_RS15880	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CUJ91_RS15885	COG2967	ApaG domain
CUJ91_RS15890	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CUJ91_RS15895	COG0546	phosphoglycolate phosphatase activity
CUJ91_RS15910	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CUJ91_RS15915	COG0134	indole-3-glycerol-phosphate synthase activity
CUJ91_RS15920	COG3025	triphosphatase activity
CUJ91_RS15925	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CUJ91_RS15930	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CUJ91_RS15940	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CUJ91_RS15945	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CUJ91_RS15950	COG0012	GTP binding
CUJ91_RS15955	COG1653	transport
CUJ91_RS15965	COG0395	ABC-type sugar transport system, permease component
CUJ91_RS15970	COG3842	ATPase activity
CUJ91_RS15980	COG0488	(ABC) transporter
CUJ91_RS15995	COG0006	proline dipeptidase activity
CUJ91_RS16010	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CUJ91_RS16015	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CUJ91_RS16020	COG2890	protein-(glutamine-N5) methyltransferase activity
CUJ91_RS16025	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CUJ91_RS16035	COG3384	dioxygenase
CUJ91_RS16040	COG0531	amino acid
CUJ91_RS16045	COG1278	Cold shock
CUJ91_RS16050	COG0443	Heat shock 70 kDa protein
CUJ91_RS16055	COG0477	Major facilitator Superfamily
CUJ91_RS16070	COG1309	transcriptional regulator
CUJ91_RS16110	COG2969	positive regulation of protein catabolic process
CUJ91_RS16115	COG0625	glutathione transferase activity
CUJ91_RS16120	COG2857	Cytochrome c1
CUJ91_RS16125	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CUJ91_RS16130	COG0723	plastoquinol--plastocyanin reductase activity
CUJ91_RS16135	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CUJ91_RS16140	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CUJ91_RS16145	COG0805	protein transport
CUJ91_RS16150	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CUJ91_RS16155	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CUJ91_RS16170	COG0140	phosphoribosyl-ATP diphosphatase activity
CUJ91_RS16180	COG0107	imidazoleglycerol-phosphate synthase activity
CUJ91_RS16185	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CUJ91_RS16195	COG2095	MarC family integral membrane protein
CUJ91_RS16200	COG0131	Imidazoleglycerol-phosphate dehydratase
CUJ91_RS16205	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CUJ91_RS16220	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CUJ91_RS16230	COG0842	Transport permease protein
CUJ91_RS16235	COG1131	(ABC) transporter
CUJ91_RS16255	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CUJ91_RS16260	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CUJ91_RS16265	COG1127	ABC transporter
CUJ91_RS16295	COG4178	(ABC) transporter
CUJ91_RS16320	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CUJ91_RS16350	COG2365	Tyrosine phosphatase family
CUJ91_RS16355	COG2814	Major facilitator Superfamily
CUJ91_RS16360	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS16370	COG0069	glutamate synthase activity
CUJ91_RS16370	COG0070	glutamate synthase
CUJ91_RS16370	COG0067	glutamate synthase
CUJ91_RS16390	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CUJ91_RS16395	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CUJ91_RS16430	COG1965	Belongs to the frataxin family
CUJ91_RS16445	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CUJ91_RS16450	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUJ91_RS16455	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CUJ91_RS16460	COG1333	cytochrome c biogenesis protein
CUJ91_RS16470	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CUJ91_RS16480	COG4232	protein-disulfide reductase activity
CUJ91_RS16490	COG0203	ribosomal protein L17
CUJ91_RS16495	COG0202	RNA polymerase activity
CUJ91_RS16500	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CUJ91_RS16505	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CUJ91_RS16510	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CUJ91_RS16525	COG0201	protein transport
CUJ91_RS16530	COG0200	Binds to the 23S rRNA
CUJ91_RS16535	COG1841	ribosomal large subunit assembly
CUJ91_RS16540	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CUJ91_RS16545	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CUJ91_RS16550	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CUJ91_RS16555	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CUJ91_RS16560	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CUJ91_RS16565	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CUJ91_RS16570	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CUJ91_RS16575	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CUJ91_RS16580	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CUJ91_RS16585	COG0255	Belongs to the universal ribosomal protein uL29 family
CUJ91_RS16590	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CUJ91_RS16595	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CUJ91_RS16600	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CUJ91_RS16610	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CUJ91_RS16615	COG0089	rRNA binding
CUJ91_RS16620	COG0088	Forms part of the polypeptide exit tunnel
CUJ91_RS16625	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CUJ91_RS16630	COG0051	transcription antitermination factor activity, RNA binding
CUJ91_RS16635	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CUJ91_RS16640	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CUJ91_RS16645	COG0049	tRNA binding
CUJ91_RS16650	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CUJ91_RS16655	COG0514	ATP-dependent DNA helicase (RecQ)
CUJ91_RS16660	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CUJ91_RS16665	COG0085	RNA polymerase activity
CUJ91_RS16670	COG0222	ribosome binding
CUJ91_RS16675	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CUJ91_RS16680	COG0081	regulation of translation
CUJ91_RS16685	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CUJ91_RS16695	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CUJ91_RS16705	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CUJ91_RS16755	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
CUJ91_RS16760	COG3396	Phenylacetate-CoA oxygenase
CUJ91_RS16765	COG3460	Phenylacetate-CoA oxygenase
CUJ91_RS16770	COG3396	Phenylacetate-CoA oxygenase
CUJ91_RS16775	COG2151	metal-sulfur cluster biosynthetic enzyme
CUJ91_RS16780	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CUJ91_RS16800	COG1522	sequence-specific DNA binding
CUJ91_RS16820	COG0281	malic enzyme
CUJ91_RS16820	COG0280	phosphate acetyltransferase
CUJ91_RS16825	COG2814	Major facilitator Superfamily
CUJ91_RS16830	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CUJ91_RS16835	COG2197	response regulator
CUJ91_RS16840	COG1881	PFAM PEBP family protein
CUJ91_RS16845	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CUJ91_RS16865	COG1280	lysine exporter protein (LysE YggA)
CUJ91_RS16870	COG2084	Dehydrogenase
CUJ91_RS16890	COG1414	Transcriptional regulator
CUJ91_RS16920	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CUJ91_RS16925	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CUJ91_RS16930	COG0037	tRNA processing
CUJ91_RS16940	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS16955	COG0617	tRNA 3'-terminal CCA addition
CUJ91_RS16965	COG1090	epimerase
CUJ91_RS16975	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CUJ91_RS16985	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CUJ91_RS16990	COG1984	allophanate hydrolase subunit 2
CUJ91_RS16995	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CUJ91_RS17020	COG4608	Belongs to the ABC transporter superfamily
CUJ91_RS17025	COG0444	Belongs to the ABC transporter superfamily
CUJ91_RS17030	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ91_RS17035	COG0601	transmembrane transport
CUJ91_RS17040	COG0747	negative chemotaxis
CUJ91_RS17045	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CUJ91_RS17050	COG1950	PFAM Membrane protein of
CUJ91_RS17055	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CUJ91_RS17060	COG1215	transferase activity, transferring glycosyl groups
CUJ91_RS17065	COG0583	DNA-binding transcription factor activity
CUJ91_RS17080	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS17110	COG1677	Flagellar hook-basal body complex protein FliE
CUJ91_RS17115	COG1766	The M ring may be actively involved in energy transduction
CUJ91_RS17175	COG1987	bacterial-type flagellum assembly
CUJ91_RS17190	COG1256	bacterial-type flagellum assembly
CUJ91_RS17195	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CUJ91_RS17205	COG1706	bacterial-type flagellum-dependent cell motility
CUJ91_RS17225	COG1749	Flagellar hook protein flgE
CUJ91_RS17235	COG1558	bacterial-type flagellum-dependent cell motility
CUJ91_RS17265	COG1598	PFAM Uncharacterised protein family UPF0150
CUJ91_RS17270	COG1191	sigma factor activity
CUJ91_RS17285	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CUJ91_RS17290	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CUJ91_RS17305	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CUJ91_RS17310	COG0745	RESPONSE REGULATOR receiver
CUJ91_RS17315	COG2201	protein-glutamate methylesterase activity
CUJ91_RS17320	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CUJ91_RS17335	COG0840	transmembrane signaling receptor activity
CUJ91_RS17350	COG2201	protein-glutamate methylesterase activity
CUJ91_RS17355	COG1360	Flagellar Motor Protein
CUJ91_RS17375	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS17385	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CUJ91_RS17405	COG2818	Glycosylase
CUJ91_RS17415	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CUJ91_RS17420	COG0667	Aldo Keto reductase
CUJ91_RS17430	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CUJ91_RS17470	COG0859	PFAM glycosyl transferase family 9
CUJ91_RS17480	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS17510	COG4695	Portal protein
CUJ91_RS17700	COG0582	viral genome integration into host DNA
CUJ91_RS17720	COG0210	DNA helicase
CUJ91_RS17730	COG0673	inositol 2-dehydrogenase activity
CUJ91_RS17740	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CUJ91_RS17745	COG0509	glycine decarboxylation via glycine cleavage system
CUJ91_RS17750	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CUJ91_RS17750	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CUJ91_RS17760	COG1760	l-serine dehydratase
CUJ91_RS17765	COG0028	Belongs to the TPP enzyme family
CUJ91_RS17775	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CUJ91_RS17775	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CUJ91_RS17775	COG0506	proline dehydrogenase activity
CUJ91_RS17780	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CUJ91_RS17785	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CUJ91_RS17795	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ91_RS17800	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CUJ91_RS17805	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CUJ91_RS17810	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CUJ91_RS17815	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CUJ91_RS17820	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CUJ91_RS17825	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CUJ91_RS17835	COG0356	it plays a direct role in the translocation of protons across the membrane
CUJ91_RS17845	COG1475	DNA binding
CUJ91_RS17850	COG1192	Involved in chromosome partitioning
CUJ91_RS17855	COG0357	Ribosomal RNA small subunit methyltransferase G
CUJ91_RS17860	COG0445	tRNA wobble uridine modification
CUJ91_RS17915	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
CUJ91_RS17925	COG0583	DNA-binding transcription factor activity
CUJ91_RS17935	COG1522	sequence-specific DNA binding
CUJ91_RS17940	COG2154	pterin-4-alpha-carbinolamine dehydratase
CUJ91_RS17955	COG0642	Histidine kinase
CUJ91_RS17965	COG1902	pentaerythritol trinitrate reductase activity
CUJ91_RS17970	COG0505	Belongs to the CarA family
CUJ91_RS17980	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CUJ91_RS17990	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CUJ91_RS17990	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS18000	COG0523	cobalamin synthesis protein
CUJ91_RS18085	COG2814	Major facilitator Superfamily
CUJ91_RS18105	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CUJ91_RS18105	COG2169	Transcriptional regulator
CUJ91_RS18125	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS18175	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CUJ91_RS18185	COG0706	membrane insertase activity
CUJ91_RS18190	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CUJ91_RS18195	COG0594	ribonuclease P activity
CUJ91_RS18325	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CUJ91_RS18430	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CUJ91_RS18440	COG1111	helicase
CUJ91_RS18440	COG1205	dead DEAH box helicase
CUJ91_RS18525	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS18530	COG0765	amino acid transport
CUJ91_RS18535	COG0765	amino acid transport
CUJ91_RS18540	COG1126	abc transporter atp-binding protein
CUJ91_RS18565	COG3123	guanosine phosphorylase activity
CUJ91_RS18570	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CUJ91_RS18575	COG1053	succinate dehydrogenase
CUJ91_RS18595	COG0583	DNA-binding transcription factor activity
CUJ91_RS18600	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CUJ91_RS18605	COG4206	TonB-dependent receptor
CUJ91_RS18635	COG3829	transcription factor binding
CUJ91_RS18655	COG0583	DNA-binding transcription factor activity
CUJ91_RS18665	COG0247	lactate metabolic process
CUJ91_RS18665	COG0277	FAD linked oxidase domain protein
CUJ91_RS18670	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS18675	COG2022	thiamine diphosphate biosynthetic process
CUJ91_RS18675	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS18680	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ91_RS18685	COG1609	Transcriptional regulator
CUJ91_RS18695	COG2271	Major facilitator Superfamily
CUJ91_RS18705	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS18710	COG0840	transmembrane signaling receptor activity
CUJ91_RS18720	COG1278	Cold shock
CUJ91_RS18740	COG3485	protocatechuate 3,4-dioxygenase
CUJ91_RS18745	COG3485	protocatechuate 3,4-dioxygenase
CUJ91_RS18750	COG0583	DNA-binding transcription factor activity
CUJ91_RS18780	COG2017	converts alpha-aldose to the beta-anomer
CUJ91_RS18785	COG2207	Transcriptional regulator
CUJ91_RS18785	COG1609	Transcriptional regulator
CUJ91_RS18790	COG2115	Belongs to the xylose isomerase family
CUJ91_RS18795	COG4213	ABC transporter substrate-binding protein
CUJ91_RS18800	COG1129	ABC transporter
CUJ91_RS18805	COG4214	carbohydrate transport
CUJ91_RS18835	COG1289	transmembrane transporter activity
CUJ91_RS18840	COG4191	Histidine kinase
CUJ91_RS18840	COG0784	Response regulator, receiver
CUJ91_RS18875	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
CUJ91_RS18880	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
CUJ91_RS18885	COG3234	Protein of unknown function (DUF1175)
CUJ91_RS18890	COG2373	Large extracellular alpha-helical protein
CUJ91_RS18895	COG5445	Predicted secreted protein (DUF2300)
CUJ91_RS18900	COG4676	Protein conserved in bacteria
CUJ91_RS18905	COG4676	Protein conserved in bacteria
CUJ91_RS18950	COG1802	Transcriptional regulator
CUJ91_RS19000	COG2814	Major facilitator Superfamily
CUJ91_RS19005	COG2188	Transcriptional regulator
CUJ91_RS19015	COG0701	Predicted permease
CUJ91_RS19020	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
CUJ91_RS19025	COG0709	Synthesizes selenophosphate from selenide and ATP
CUJ91_RS19030	COG3958	Transketolase
CUJ91_RS19035	COG3959	Transketolase, thiamine diphosphate binding domain
CUJ91_RS19040	COG2271	Major facilitator Superfamily
CUJ91_RS19045	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS19050	COG0583	DNA-binding transcription factor activity
CUJ91_RS19060	COG5265	(ABC) transporter
CUJ91_RS19105	COG4964	Belongs to the GSP D family
CUJ91_RS19145	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ91_RS19150	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS19155	COG1609	Transcriptional regulator
CUJ91_RS19160	COG3842	ATPase activity
CUJ91_RS19175	COG0395	ABC-type sugar transport system, permease component
CUJ91_RS19215	COG0473	3-isopropylmalate dehydrogenase activity
CUJ91_RS19220	COG0583	DNA-binding transcription factor activity
CUJ91_RS19225	COG1522	sequence-specific DNA binding
CUJ91_RS19235	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CUJ91_RS19245	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS19255	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS19265	COG0601	transmembrane transport
CUJ91_RS19270	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ91_RS19310	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CUJ91_RS19340	COG1064	alcohol dehydrogenase
CUJ91_RS19345	COG4133	protoheme IX ABC transporter activity
CUJ91_RS19350	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CUJ91_RS19370	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CUJ91_RS19385	COG1131	(ABC) transporter
CUJ91_RS19390	COG0842	Transport permease protein
CUJ91_RS19400	COG4977	sequence-specific DNA binding
CUJ91_RS19400	COG1917	Cupin 2, conserved barrel domain protein
CUJ91_RS19410	COG5295	Hep Hag repeat protein
CUJ91_RS19420	COG2223	nitrite transmembrane transporter activity
CUJ91_RS19425	COG0477	Major facilitator Superfamily
CUJ91_RS19435	COG1802	Transcriptional regulator
CUJ91_RS19445	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CUJ91_RS19455	COG0179	Fumarylacetoacetate (FAA) hydrolase
CUJ91_RS19480	COG0583	DNA-binding transcription factor activity
CUJ91_RS19485	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS19490	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CUJ91_RS19500	COG1596	polysaccharide export
CUJ91_RS19510	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CUJ91_RS19515	COG3206	protein involved in exopolysaccharide biosynthesis
CUJ91_RS19515	COG0489	protein tyrosine kinase activity
CUJ91_RS19520	COG1215	transferase activity, transferring glycosyl groups
CUJ91_RS19550	COG1739	Uncharacterized protein family UPF0029
CUJ91_RS19555	COG1280	lysine exporter protein (LysE YggA)
CUJ91_RS19580	COG0840	transmembrane signaling receptor activity
CUJ91_RS19585	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CUJ91_RS19590	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CUJ91_RS19590	COG0028	Belongs to the TPP enzyme family
CUJ91_RS19595	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CUJ91_RS19615	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ91_RS19620	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CUJ91_RS19625	COG2080	2 iron, 2 sulfur cluster binding
CUJ91_RS19645	COG1360	Flagellar Motor Protein
CUJ91_RS19660	COG0726	polysaccharide deacetylase
CUJ91_RS19665	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS19710	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CUJ91_RS19715	COG2814	Major facilitator Superfamily
CUJ91_RS19720	COG0058	SHG alpha-glucan phosphorylase activity
CUJ91_RS19750	COG0583	DNA-binding transcription factor activity
CUJ91_RS19755	COG3842	ATPase activity
CUJ91_RS19765	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS19770	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ91_RS19820	COG0583	DNA-binding transcription factor activity
CUJ91_RS19840	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS19870	COG0246	Mannitol dehydrogenase
CUJ91_RS19875	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ91_RS19880	COG1063	alcohol dehydrogenase
CUJ91_RS19885	COG2271	Major facilitator Superfamily
CUJ91_RS19890	COG1802	Transcriptional regulator
CUJ91_RS19895	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
CUJ91_RS19900	COG1473	amidohydrolase
CUJ91_RS19905	COG1414	Transcriptional regulator
CUJ91_RS19910	COG2186	Transcriptional regulator
CUJ91_RS19915	COG2084	Dehydrogenase
CUJ91_RS19920	COG3395	kinase activity
CUJ91_RS19925	COG0235	Class ii aldolase
CUJ91_RS19930	COG2271	Major facilitator Superfamily
CUJ91_RS19935	COG3622	Belongs to the hyi family
CUJ91_RS19940	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS19960	COG2205	protein histidine kinase activity
CUJ91_RS19965	COG0583	DNA-binding transcription factor activity
CUJ91_RS19970	COG0667	Aldo Keto reductase
CUJ91_RS19975	COG0583	DNA-binding transcription factor activity
CUJ91_RS19990	COG0540	Belongs to the ATCase OTCase family
CUJ91_RS20000	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ91_RS20005	COG0739	heme binding
CUJ91_RS20030	COG2807	transmembrane transport
CUJ91_RS20035	COG0686	Belongs to the AlaDH PNT family
CUJ91_RS20065	COG0583	DNA-binding transcription factor activity
CUJ91_RS20085	COG1538	Outer membrane efflux protein
CUJ91_RS20095	COG5002	protein histidine kinase activity
CUJ91_RS20100	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CUJ91_RS20110	COG2353	YceI-like domain
CUJ91_RS20115	COG2353	YceI-like domain
CUJ91_RS20125	COG2116	formate transmembrane transporter activity
CUJ91_RS20140	COG4191	Histidine kinase
CUJ91_RS20140	COG0784	Response regulator, receiver
CUJ91_RS20150	COG5001	Diguanylate cyclase
CUJ91_RS20150	COG5002	protein histidine kinase activity
CUJ91_RS20160	COG3971	2-oxopent-4-enoate hydratase activity
CUJ91_RS20170	COG3384	dioxygenase
CUJ91_RS20175	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS20185	COG0179	Fumarylacetoacetate (FAA) hydrolase
CUJ91_RS20190	COG1846	Transcriptional regulator
CUJ91_RS20215	COG1335	isochorismatase
CUJ91_RS20235	COG4206	TonB-dependent receptor
CUJ91_RS20275	COG0514	ATP-dependent DNA helicase (RecQ)
CUJ91_RS20280	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS20295	COG1215	transferase activity, transferring glycosyl groups
CUJ91_RS20300	COG2192	nodulation
CUJ91_RS20310	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CUJ91_RS20315	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS20320	COG5265	(ABC) transporter
CUJ91_RS20340	COG0688	phosphatidylethanolamine metabolic process
CUJ91_RS20345	COG3546	catalase activity
CUJ91_RS20350	COG3685	Protein conserved in bacteria
CUJ91_RS20380	COG1294	oxidase, subunit
CUJ91_RS20385	COG1271	oxidase subunit
CUJ91_RS20390	COG0243	molybdopterin cofactor binding
CUJ91_RS20400	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CUJ91_RS20400	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CUJ91_RS20405	COG1058	Belongs to the CinA family
CUJ91_RS20405	COG1546	Belongs to the CinA family
CUJ91_RS20445	COG0784	Response regulator, receiver
CUJ91_RS20445	COG4191	Histidine kinase
CUJ91_RS20465	COG0071	Belongs to the small heat shock protein (HSP20) family
CUJ91_RS20500	COG4191	Histidine kinase
CUJ91_RS20500	COG0784	Response regulator, receiver
CUJ91_RS20530	COG1902	pentaerythritol trinitrate reductase activity
CUJ91_RS20540	COG1609	Transcriptional regulator
CUJ91_RS20545	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CUJ91_RS20550	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CUJ91_RS20560	COG1850	ribulose-bisphosphate carboxylase activity
CUJ91_RS20580	COG2186	Transcriptional regulator
CUJ91_RS20585	COG0246	Mannitol dehydrogenase
CUJ91_RS20590	COG2271	Major facilitator Superfamily
CUJ91_RS20595	COG2721	sulfolactate sulfo-lyase activity
CUJ91_RS20650	COG2159	amidohydrolase
CUJ91_RS20665	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CUJ91_RS20675	COG1609	Transcriptional regulator
CUJ91_RS20705	COG1845	cytochrome c oxidase, subunit III
CUJ91_RS20715	COG3850	Histidine kinase
CUJ91_RS20720	COG2197	response regulator
CUJ91_RS20730	COG2223	nitrite transmembrane transporter activity
CUJ91_RS20735	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CUJ91_RS20740	COG1140	nitrate reductase beta subunit
CUJ91_RS20745	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CUJ91_RS20750	COG2181	nitrate reductase activity
CUJ91_RS20790	COG1215	transferase activity, transferring glycosyl groups
CUJ91_RS20815	COG0662	Cupin 2, conserved barrel domain protein
CUJ91_RS20815	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CUJ91_RS20855	COG0842	Transport permease protein
CUJ91_RS20860	COG1131	(ABC) transporter
CUJ91_RS20875	COG0235	Class ii aldolase
CUJ91_RS20885	COG0583	DNA-binding transcription factor activity
CUJ91_RS20890	COG2072	flavoprotein involved in K transport
CUJ91_RS20910	COG3008	intermembrane lipid transfer
CUJ91_RS20910	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CUJ91_RS20915	COG2995	paraquat-inducible protein a
CUJ91_RS20940	COG0586	Pfam SNARE associated Golgi protein
CUJ91_RS21005	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CUJ91_RS21010	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CUJ91_RS21015	COG4191	Histidine kinase
CUJ91_RS21015	COG0784	Response regulator, receiver
CUJ91_RS21040	COG0183	Belongs to the thiolase family
CUJ91_RS21055	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CUJ91_RS21060	COG2814	Major facilitator Superfamily
CUJ91_RS21070	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ91_RS21075	COG0604	alcohol dehydrogenase
CUJ91_RS21075	COG3321	synthase
CUJ91_RS21075	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS21095	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS21110	COG1063	alcohol dehydrogenase
CUJ91_RS21120	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS21125	COG1129	ABC transporter
CUJ91_RS21130	COG2186	Transcriptional regulator
CUJ91_RS21135	COG0300	oxidoreductase activity
CUJ91_RS21145	COG0300	oxidoreductase activity
CUJ91_RS21150	COG2207	Transcriptional regulator
CUJ91_RS21190	COG1301	dicarboxylic acid transport
CUJ91_RS21195	COG0583	DNA-binding transcription factor activity
CUJ91_RS21200	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CUJ91_RS21205	COG2814	Major facilitator Superfamily
CUJ91_RS21210	COG0583	DNA-binding transcription factor activity
CUJ91_RS21215	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ91_RS21220	COG1301	dicarboxylic acid transport
CUJ91_RS21225	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS21245	COG0583	DNA-binding transcription factor activity
CUJ91_RS21295	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS21300	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CUJ91_RS21325	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS21330	COG0546	phosphoglycolate phosphatase activity
CUJ91_RS21335	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUJ91_RS21365	COG0535	radical SAM domain protein
CUJ91_RS21380	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CUJ91_RS21385	COG0596	Alpha beta hydrolase
CUJ91_RS21400	COG2037	Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT)
CUJ91_RS21405	COG1229	Formylmethanofuran dehydrogenase subunit A
CUJ91_RS21450	COG1850	ribulose-bisphosphate carboxylase activity
CUJ91_RS21465	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
CUJ91_RS21470	COG3954	Phosphoribulokinase
CUJ91_RS21475	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CUJ91_RS21480	COG0191	fructose-bisphosphate aldolase activity
CUJ91_RS21485	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CUJ91_RS21500	COG3284	Transcriptional regulator
CUJ91_RS21515	COG1795	PFAM Formaldehyde-activating enzyme (Fae)
CUJ91_RS21525	COG0189	ligase activity
CUJ91_RS21530	COG3252	Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT
CUJ91_RS21540	COG0702	epimerase
CUJ91_RS21550	COG2154	pterin-4-alpha-carbinolamine dehydratase
CUJ91_RS21560	COG2010	Cytochrome c
CUJ91_RS21575	COG0583	DNA-binding transcription factor activity
CUJ91_RS21580	COG0714	Associated with various cellular activities
CUJ91_RS21625	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS21635	COG0583	DNA-binding transcription factor activity
CUJ91_RS21640	COG0596	Alpha beta hydrolase
CUJ91_RS21650	COG1215	transferase activity, transferring glycosyl groups
CUJ91_RS21660	COG2202	Pas domain
CUJ91_RS21660	COG2205	protein histidine kinase activity
CUJ91_RS21675	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS21680	COG1024	Enoyl-CoA hydratase
CUJ91_RS21685	COG2814	Major facilitator Superfamily
CUJ91_RS21690	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS21710	COG3706	GGDEF domain
CUJ91_RS21745	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS21760	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CUJ91_RS21770	COG2134	cdp-diacylglycerol pyrophosphatase
CUJ91_RS21790	COG0655	NAD(P)H dehydrogenase (quinone) activity
CUJ91_RS21800	COG0484	heat shock protein binding
CUJ91_RS21830	COG0583	DNA-binding transcription factor activity
CUJ91_RS21840	COG1653	transport
CUJ91_RS21845	COG1175	transmembrane transport
CUJ91_RS21850	COG0395	ABC-type sugar transport system, permease component
CUJ91_RS21855	COG3842	ATPase activity
CUJ91_RS21895	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS21900	COG2271	Major facilitator Superfamily
CUJ91_RS21905	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ91_RS21915	COG0583	DNA-binding transcription factor activity
CUJ91_RS21920	COG3254	rhamnose metabolic process
CUJ91_RS21925	COG3618	amidohydrolase
CUJ91_RS21930	COG1129	ABC transporter
CUJ91_RS21935	COG4211	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS21940	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS21945	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS21950	COG0701	Predicted permease
CUJ91_RS22000	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS22005	COG3842	ATPase activity
CUJ91_RS22025	COG0642	Histidine kinase
CUJ91_RS22030	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ91_RS22035	COG3707	response regulator
CUJ91_RS22040	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CUJ91_RS22065	COG3284	Transcriptional regulator
CUJ91_RS22075	COG2252	PERMEase
CUJ91_RS22080	COG0330	HflC and HflK could
CUJ91_RS22100	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS22120	COG1024	Enoyl-CoA hydratase
CUJ91_RS22125	COG1024	Enoyl-CoA hydratase
CUJ91_RS22160	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS22195	COG2375	cellular response to nickel ion
CUJ91_RS22200	COG1695	Transcriptional regulator
CUJ91_RS22210	COG0277	FAD linked oxidase domain protein
CUJ91_RS22215	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS22235	COG0583	DNA-binding transcription factor activity
CUJ91_RS22240	COG0583	DNA-binding transcription factor activity
CUJ91_RS22250	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CUJ91_RS22260	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS22265	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CUJ91_RS22275	COG0628	permease
CUJ91_RS22280	COG0076	glutamate decarboxylase activity
CUJ91_RS22290	COG2985	domain, Protein
CUJ91_RS22335	COG4566	intracellular signal transduction
CUJ91_RS22360	COG2995	paraquat-inducible protein a
CUJ91_RS22365	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CUJ91_RS22365	COG3008	intermembrane lipid transfer
CUJ91_RS22380	COG3064	Membrane
CUJ91_RS22425	COG0463	Glycosyl transferase, family 2
CUJ91_RS22425	COG1216	Glycosyl transferase, family 2
CUJ91_RS22455	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CUJ91_RS22465	COG2066	Belongs to the glutaminase family
CUJ91_RS22470	COG2814	Major facilitator Superfamily
CUJ91_RS22475	COG0400	carboxylic ester hydrolase activity
CUJ91_RS22480	COG1077	Cell shape determining protein MreB Mrl
CUJ91_RS22505	COG3447	MASE1 domain protein
CUJ91_RS22505	COG5002	protein histidine kinase activity
CUJ91_RS22505	COG5001	Diguanylate cyclase
CUJ91_RS22520	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ91_RS22530	COG1764	response to oxidative stress
CUJ91_RS22540	COG0583	DNA-binding transcription factor activity
CUJ91_RS22545	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ91_RS22550	COG0477	Major facilitator Superfamily
CUJ91_RS22585	COG2207	Transcriptional regulator
CUJ91_RS22590	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS22595	COG0583	DNA-binding transcription factor activity
CUJ91_RS22600	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CUJ91_RS22630	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUJ91_RS22630	COG1024	Enoyl-CoA hydratase
CUJ91_RS22635	COG0477	Major facilitator Superfamily
CUJ91_RS22640	COG0028	Belongs to the TPP enzyme family
CUJ91_RS22650	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS22665	COG0583	DNA-binding transcription factor activity
CUJ91_RS22670	COG0513	Belongs to the DEAD box helicase family
CUJ91_RS22685	COG0477	Major facilitator Superfamily
CUJ91_RS22700	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CUJ91_RS22705	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CUJ91_RS22710	COG1024	Enoyl-CoA hydratase
CUJ91_RS22715	COG5001	Diguanylate cyclase
CUJ91_RS22720	COG1201	RNA secondary structure unwinding
CUJ91_RS22725	COG0667	Aldo Keto reductase
CUJ91_RS22770	COG0693	protein deglycase activity
CUJ91_RS22805	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CUJ91_RS22815	COG2186	Transcriptional regulator
CUJ91_RS22820	COG0247	lactate metabolic process
CUJ91_RS22825	COG1139	Iron-sulfur cluster binding protein
CUJ91_RS22845	COG0668	transmembrane transport
CUJ91_RS22885	COG0477	Major facilitator Superfamily
CUJ91_RS22900	COG3829	transcription factor binding
CUJ91_RS22915	COG1741	Belongs to the pirin family
CUJ91_RS22920	COG0583	DNA-binding transcription factor activity
CUJ91_RS22925	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CUJ91_RS22930	COG1522	sequence-specific DNA binding
CUJ91_RS22935	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CUJ91_RS22950	COG2205	protein histidine kinase activity
CUJ91_RS22950	COG0784	Response regulator, receiver
CUJ91_RS22955	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CUJ91_RS22975	COG0583	DNA-binding transcription factor activity
CUJ91_RS22980	COG1448	Aminotransferase
CUJ91_RS22990	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CUJ91_RS23000	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CUJ91_RS23005	COG0628	permease
CUJ91_RS23010	COG2733	membrane
CUJ91_RS23015	COG0420	3'-5' exonuclease activity
CUJ91_RS23050	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
CUJ91_RS23065	COG0477	Major facilitator Superfamily
CUJ91_RS23085	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
CUJ91_RS23090	COG1346	cytolysis
CUJ91_RS23095	COG1380	Effector of murein hydrolase LrgA
CUJ91_RS23100	COG0596	Alpha beta hydrolase
CUJ91_RS23120	COG0308	aminopeptidase N
CUJ91_RS23150	COG0297	glycogen (starch) synthase activity
CUJ91_RS23155	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CUJ91_RS23170	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS23215	COG1295	ribonuclease BN
CUJ91_RS23220	COG1793	dna ligase
CUJ91_RS23220	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CUJ91_RS23225	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CUJ91_RS23225	COG1793	dna ligase
CUJ91_RS23230	COG0745	RESPONSE REGULATOR receiver
CUJ91_RS23235	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS23240	COG2080	2 iron, 2 sulfur cluster binding
CUJ91_RS23245	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CUJ91_RS23250	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ91_RS23270	COG0628	permease
CUJ91_RS23280	COG4191	Histidine kinase
CUJ91_RS23280	COG0784	Response regulator, receiver
CUJ91_RS23290	COG3588	fructose-bisphosphate aldolase
CUJ91_RS23295	COG0432	Pfam Uncharacterised protein family UPF0047
CUJ91_RS23315	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CUJ91_RS23335	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
CUJ91_RS23340	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CUJ91_RS23345	COG3132	Protein of unknown function, DUF480
CUJ91_RS23380	COG2204	response regulator
CUJ91_RS23390	COG3437	response regulator, receiver
CUJ91_RS23405	COG4191	Histidine kinase
CUJ91_RS23410	COG0366	Alpha amylase catalytic
CUJ91_RS23465	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ91_RS23535	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CUJ91_RS23545	COG4789	Type iii secretion
CUJ91_RS23550	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CUJ91_RS23625	COG2124	cytochrome p450
CUJ91_RS23640	COG0745	RESPONSE REGULATOR receiver
CUJ91_RS23650	COG2207	Transcriptional regulator
CUJ91_RS23670	COG0154	amidase activity
CUJ91_RS23705	COG1414	Transcriptional regulator
CUJ91_RS23710	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CUJ91_RS23715	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CUJ91_RS23725	COG3618	amidohydrolase
CUJ91_RS23795	COG2336	PFAM SpoVT AbrB
CUJ91_RS23820	COG1850	ribulose-bisphosphate carboxylase activity
CUJ91_RS23845	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS23850	COG1129	ABC transporter
CUJ91_RS23865	COG4597	amino acid ABC transporter
CUJ91_RS23890	COG0583	DNA-binding transcription factor activity
CUJ91_RS23895	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CUJ91_RS23900	COG2271	Major facilitator Superfamily
CUJ91_RS23935	COG0583	DNA-binding transcription factor activity
CUJ91_RS23945	COG0642	Histidine kinase
CUJ91_RS23950	COG0517	IMP dehydrogenase activity
CUJ91_RS23980	COG3119	arylsulfatase activity
CUJ91_RS23985	COG0583	DNA-binding transcription factor activity
CUJ91_RS23995	COG2113	Glycine betaine
CUJ91_RS24015	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CUJ91_RS24020	COG2181	nitrate reductase activity
CUJ91_RS24020	COG0247	lactate metabolic process
CUJ91_RS24025	COG1902	pentaerythritol trinitrate reductase activity
CUJ91_RS24025	COG0446	pyridine nucleotide-disulphide oxidoreductase
CUJ91_RS24050	COG2010	Cytochrome c
CUJ91_RS24060	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ91_RS24060	COG2010	Cytochrome c
CUJ91_RS24095	COG1309	transcriptional regulator
CUJ91_RS24100	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS24105	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
CUJ91_RS24110	COG2015	COG2015, Alkyl sulfatase and related hydrolases
CUJ91_RS24120	COG0477	Major facilitator Superfamily
CUJ91_RS24150	COG0446	pyridine nucleotide-disulphide oxidoreductase
CUJ91_RS24150	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CUJ91_RS24165	COG1760	l-serine dehydratase
CUJ91_RS24205	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS24215	COG1858	cytochrome C peroxidase
CUJ91_RS24220	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUJ91_RS24310	COG1797	cobyrinic acid a,c-diamide synthase activity
CUJ91_RS24315	COG0778	Nitroreductase
CUJ91_RS24325	COG2205	protein histidine kinase activity
CUJ91_RS24335	COG0745	RESPONSE REGULATOR receiver
CUJ91_RS24360	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CUJ91_RS24375	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CUJ91_RS24405	COG0596	Alpha beta hydrolase
CUJ91_RS24410	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CUJ91_RS24410	COG1017	nitric oxide dioxygenase activity
CUJ91_RS24415	COG0625	glutathione transferase activity
CUJ91_RS24485	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CUJ91_RS24490	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS24495	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS24505	COG3246	L-lysine catabolic process to acetate
CUJ91_RS24515	COG2323	membrane
CUJ91_RS24545	COG0477	Major facilitator Superfamily
CUJ91_RS24555	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS24560	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS24570	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ91_RS24595	COG1116	anion transmembrane transporter activity
CUJ91_RS24610	COG4770	biotin carboxylase activity
CUJ91_RS24625	COG0129	dihydroxy-acid dehydratase activity
CUJ91_RS24630	COG1609	Transcriptional regulator
CUJ91_RS24650	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS24675	COG1177	transmembrane transport
CUJ91_RS24700	COG0251	oxidation-reduction process
CUJ91_RS24710	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS24720	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ91_RS24730	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ91_RS24735	COG1116	anion transmembrane transporter activity
CUJ91_RS24740	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS24755	COG1215	transferase activity, transferring glycosyl groups
CUJ91_RS24760	COG1215	transferase activity, transferring glycosyl groups
CUJ91_RS24770	COG2814	Major facilitator Superfamily
CUJ91_RS24785	COG0154	amidase activity
CUJ91_RS24800	COG0179	Fumarylacetoacetate (FAA) hydrolase
CUJ91_RS24805	COG2267	carboxylic ester hydrolase activity
CUJ91_RS24810	COG1228	amidohydrolase
CUJ91_RS24820	COG1129	ABC transporter
CUJ91_RS24825	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS24890	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS24910	COG0596	Alpha beta hydrolase
CUJ91_RS24915	COG0596	Alpha beta hydrolase
CUJ91_RS24935	COG2159	amidohydrolase
CUJ91_RS24940	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CUJ91_RS24950	COG0028	Belongs to the TPP enzyme family
CUJ91_RS24955	COG0583	DNA-binding transcription factor activity
CUJ91_RS24960	COG2706	6-phosphogluconolactonase activity
CUJ91_RS24975	COG2271	Major facilitator Superfamily
CUJ91_RS24980	COG0823	Involved in the tonB-independent uptake of proteins
CUJ91_RS24995	COG3384	dioxygenase
CUJ91_RS25010	COG2159	amidohydrolase
CUJ91_RS25020	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS25040	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS25045	COG2814	Major facilitator Superfamily
CUJ91_RS25065	COG2837	iron assimilation
CUJ91_RS25075	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ91_RS25090	COG4608	Belongs to the ABC transporter superfamily
CUJ91_RS25095	COG0444	Belongs to the ABC transporter superfamily
CUJ91_RS25100	COG0583	DNA-binding transcription factor activity
CUJ91_RS25110	COG1082	Xylose isomerase domain protein TIM barrel
CUJ91_RS25110	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CUJ91_RS25125	COG1129	ABC transporter
CUJ91_RS25130	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS25140	COG0583	DNA-binding transcription factor activity
CUJ91_RS25145	COG3485	protocatechuate 3,4-dioxygenase
CUJ91_RS25165	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS25175	COG0673	inositol 2-dehydrogenase activity
CUJ91_RS25190	COG5002	protein histidine kinase activity
CUJ91_RS25190	COG2198	Histidine kinase
CUJ91_RS25190	COG0784	Response regulator, receiver
CUJ91_RS25205	COG4172	Belongs to the ABC transporter superfamily
CUJ91_RS25210	COG4239	(ABC) transporter, permease
CUJ91_RS25215	COG4174	ABC transporter (Permease)
CUJ91_RS25230	COG0848	biopolymer transport protein
CUJ91_RS25235	COG0811	peptide transport
CUJ91_RS25240	COG4771	TonB-dependent receptor
CUJ91_RS25265	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUJ91_RS25270	COG0569	domain protein
CUJ91_RS25270	COG2985	domain, Protein
CUJ91_RS25280	COG0058	SHG alpha-glucan phosphorylase activity
CUJ91_RS25300	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CUJ91_RS25305	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CUJ91_RS25315	COG1733	regulation of RNA biosynthetic process
CUJ91_RS25320	COG2085	NADP oxidoreductase coenzyme F420-dependent
CUJ91_RS25325	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ91_RS25330	COG0747	negative chemotaxis
CUJ91_RS25360	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ91_RS25420	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CUJ91_RS25425	COG0517	IMP dehydrogenase activity
CUJ91_RS25425	COG0516	GMP reductase activity
CUJ91_RS25435	COG2094	Belongs to the DNA glycosylase MPG family
CUJ91_RS25445	COG0387	Pfam Sodium calcium exchanger
CUJ91_RS25450	COG0583	DNA-binding transcription factor activity
CUJ91_RS25460	COG0765	amino acid transport
CUJ91_RS25465	COG0765	amino acid transport
CUJ91_RS25490	COG0596	Alpha beta hydrolase
CUJ91_RS25505	COG1349	DNA-binding transcription factor activity
CUJ91_RS25510	COG0494	nUDIX hydrolase
CUJ91_RS25520	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS25535	COG0628	permease
CUJ91_RS25550	COG5001	Diguanylate cyclase
CUJ91_RS25550	COG3300	MHYT domain
CUJ91_RS25555	COG2207	Transcriptional regulator
CUJ91_RS25560	COG1064	alcohol dehydrogenase
CUJ91_RS25565	COG0583	DNA-binding transcription factor activity
CUJ91_RS25660	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CUJ91_RS25690	COG3550	peptidyl-serine autophosphorylation
CUJ91_RS25700	COG2205	protein histidine kinase activity
CUJ91_RS25700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS25720	COG0625	glutathione transferase activity
CUJ91_RS25725	COG0735	belongs to the Fur family
CUJ91_RS25755	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ91_RS25760	COG0697	spore germination
CUJ91_RS25790	COG0596	Alpha beta hydrolase
CUJ91_RS25800	COG4413	Urea transporter
CUJ91_RS25805	COG0235	Class ii aldolase
CUJ91_RS25810	COG1942	4-Oxalocrotonate Tautomerase
CUJ91_RS25815	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS25830	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CUJ91_RS25840	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS25845	COG2721	sulfolactate sulfo-lyase activity
CUJ91_RS25855	COG2271	Major facilitator Superfamily
CUJ91_RS25860	COG2186	Transcriptional regulator
CUJ91_RS25865	COG3344	reverse transcriptase
CUJ91_RS25880	COG3836	Belongs to the HpcH HpaI aldolase family
CUJ91_RS25885	COG2084	Dehydrogenase
CUJ91_RS25895	COG0129	dihydroxy-acid dehydratase activity
CUJ91_RS25900	COG2271	Major facilitator Superfamily
CUJ91_RS25905	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS25910	COG1271	oxidase subunit
CUJ91_RS25915	COG1294	oxidase, subunit
CUJ91_RS25920	COG2197	response regulator
CUJ91_RS25940	COG0277	FAD linked oxidase domain protein
CUJ91_RS25950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS25960	COG0765	amino acid transport
CUJ91_RS25965	COG1126	abc transporter atp-binding protein
CUJ91_RS25975	COG2188	Transcriptional regulator
CUJ91_RS25980	COG2986	histidine ammonia-lyase
CUJ91_RS26025	COG0583	DNA-binding transcription factor activity
CUJ91_RS26035	COG4115	mRNA cleavage
CUJ91_RS26040	COG2161	toxin-antitoxin pair type II binding
CUJ91_RS26065	COG3052	prosthetic group binding
CUJ91_RS26085	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CUJ91_RS26095	COG4336	lyase activity
CUJ91_RS26100	COG2814	Major facilitator Superfamily
CUJ91_RS26105	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS26110	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS26115	COG1129	ABC transporter
CUJ91_RS26120	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS26140	COG1408	metallophosphoesterase
CUJ91_RS26185	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS26210	COG3842	ATPase activity
CUJ91_RS26220	COG1349	DNA-binding transcription factor activity
CUJ91_RS26230	COG1349	DNA-binding transcription factor activity
CUJ91_RS26235	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CUJ91_RS26240	COG3395	kinase activity
CUJ91_RS26255	COG2376	Dihydroxyacetone kinase
CUJ91_RS26260	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS26265	COG1129	ABC transporter
CUJ91_RS26270	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS26275	COG0235	Class ii aldolase
CUJ91_RS26280	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
CUJ91_RS26285	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
CUJ91_RS26290	COG2188	Transcriptional regulator
CUJ91_RS26295	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CUJ91_RS26315	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS26320	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS26325	COG0840	transmembrane signaling receptor activity
CUJ91_RS26330	COG2271	Major facilitator Superfamily
CUJ91_RS26335	COG2814	Major facilitator Superfamily
CUJ91_RS26345	COG0163	prenyltransferase activity
CUJ91_RS26390	COG1024	Enoyl-CoA hydratase
CUJ91_RS26395	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CUJ91_RS26400	COG0583	DNA-binding transcription factor activity
CUJ91_RS26435	COG2815	serine threonine protein kinase
CUJ91_RS26435	COG0515	serine threonine protein kinase
CUJ91_RS26440	COG0631	protein serine/threonine phosphatase activity
CUJ91_RS26535	COG0515	serine threonine protein kinase
CUJ91_RS26555	COG0154	amidase activity
CUJ91_RS26575	COG4221	oxidoreductase activity
CUJ91_RS26590	COG0747	negative chemotaxis
CUJ91_RS26605	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ91_RS26610	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS26620	COG3608	succinylglutamate desuccinylase aspartoacylase
CUJ91_RS26625	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ91_RS26630	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS26635	COG1464	Belongs to the NlpA lipoprotein family
CUJ91_RS26640	COG0477	Major facilitator Superfamily
CUJ91_RS26650	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CUJ91_RS26660	COG0583	DNA-binding transcription factor activity
CUJ91_RS26665	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ91_RS26680	COG2814	Major facilitator Superfamily
CUJ91_RS26685	COG2080	2 iron, 2 sulfur cluster binding
CUJ91_RS26705	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS26755	COG2271	Major facilitator Superfamily
CUJ91_RS26760	COG1609	Transcriptional regulator
CUJ91_RS26765	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS26770	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CUJ91_RS26770	COG0546	phosphoglycolate phosphatase activity
CUJ91_RS26795	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CUJ91_RS26810	COG5001	Diguanylate cyclase
CUJ91_RS26820	COG0583	DNA-binding transcription factor activity
CUJ91_RS26825	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CUJ91_RS26845	COG2271	Major facilitator Superfamily
CUJ91_RS26875	COG1309	transcriptional regulator
CUJ91_RS26890	COG1301	dicarboxylic acid transport
CUJ91_RS26920	COG0417	DNA replication proofreading
CUJ91_RS26930	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS26945	COG3384	dioxygenase
CUJ91_RS26960	COG0583	DNA-binding transcription factor activity
CUJ91_RS26965	COG2828	Protein conserved in bacteria
CUJ91_RS26980	COG0583	DNA-binding transcription factor activity
CUJ91_RS26985	COG0640	Transcriptional regulator
CUJ91_RS27000	COG4122	O-methyltransferase activity
CUJ91_RS27040	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS27045	COG0028	Belongs to the TPP enzyme family
CUJ91_RS27070	COG0625	glutathione transferase activity
CUJ91_RS27080	COG2706	6-phosphogluconolactonase activity
CUJ91_RS27085	COG0840	transmembrane signaling receptor activity
CUJ91_RS27090	COG0492	ferredoxin-NADP+ reductase activity
CUJ91_RS27100	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CUJ91_RS27110	COG0395	ABC-type sugar transport system, permease component
CUJ91_RS27160	COG1940	carbohydrate kinase activity
CUJ91_RS27180	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS27190	COG2271	Major facilitator Superfamily
CUJ91_RS27195	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CUJ91_RS27200	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CUJ91_RS27205	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CUJ91_RS27205	COG1082	Xylose isomerase domain protein TIM barrel
CUJ91_RS27245	COG3938	Belongs to the proline racemase family
CUJ91_RS27250	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ91_RS27260	COG0477	Major facilitator Superfamily
CUJ91_RS27275	COG2259	Doxx family
CUJ91_RS27300	COG2391	methyltransferase activity
CUJ91_RS27315	COG1914	H( )-stimulated, divalent metal cation uptake system
CUJ91_RS27325	COG2011	ABC-type metal ion transport system permease component
CUJ91_RS27330	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CUJ91_RS27340	COG1464	Belongs to the NlpA lipoprotein family
CUJ91_RS27355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ91_RS27365	COG0583	DNA-binding transcription factor activity
CUJ91_RS27385	COG2902	Dehydrogenase
CUJ91_RS27390	COG0596	Alpha beta hydrolase
CUJ91_RS27390	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CUJ91_RS27390	COG2226	methyltransferase
CUJ91_RS27405	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CUJ91_RS27505	COG3246	L-lysine catabolic process to acetate
CUJ91_RS27510	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUJ91_RS27520	COG0657	acetylesterase activity
CUJ91_RS27530	COG0546	phosphoglycolate phosphatase activity
CUJ91_RS27540	COG2885	chlorophyll binding
CUJ91_RS27560	COG0477	Major facilitator Superfamily
CUJ91_RS27565	COG0154	amidase activity
CUJ91_RS27620	COG2916	Histone family protein nucleoid-structuring protein H-NS
CUJ91_RS27640	COG0545	Peptidyl-prolyl cis-trans isomerase
CUJ91_RS27675	COG1295	ribonuclease BN
CUJ91_RS27680	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS27700	COG2308	Evidence 4 Homologs of previously reported genes of
CUJ91_RS27725	COG4166	transmembrane transport
CUJ91_RS27730	COG0601	transmembrane transport
CUJ91_RS27735	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ91_RS27760	COG3842	ATPase activity
CUJ91_RS27770	COG1177	transmembrane transport
CUJ91_RS27785	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ91_RS27800	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CUJ91_RS27810	COG0295	cytidine deaminase activity
CUJ91_RS27815	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CUJ91_RS27830	COG2197	response regulator
CUJ91_RS27840	COG0784	Response regulator, receiver
CUJ91_RS27840	COG5002	protein histidine kinase activity
CUJ91_RS27855	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CUJ91_RS27900	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
CUJ91_RS27920	COG0745	RESPONSE REGULATOR receiver
CUJ91_RS27925	COG1609	Transcriptional regulator
CUJ91_RS27930	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CUJ91_RS27930	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CUJ91_RS27935	COG1105	Belongs to the carbohydrate kinase PfkB family
CUJ91_RS27940	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CUJ91_RS27940	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CUJ91_RS27960	COG0583	DNA-binding transcription factor activity
CUJ91_RS27970	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS27980	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS27985	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CUJ91_RS27995	COG2175	clavaminate synthase activity
CUJ91_RS28005	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUJ91_RS28030	COG1764	response to oxidative stress
CUJ91_RS28035	COG1993	acr, cog1993
CUJ91_RS28040	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CUJ91_RS28065	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CUJ91_RS28065	COG2885	chlorophyll binding
CUJ91_RS28070	COG5295	Hep Hag repeat protein
CUJ91_RS28075	COG5002	protein histidine kinase activity
CUJ91_RS28085	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ91_RS28095	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CUJ91_RS28105	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS28110	COG4977	sequence-specific DNA binding
CUJ91_RS28110	COG1917	Cupin 2, conserved barrel domain protein
CUJ91_RS28130	COG0625	glutathione transferase activity
CUJ91_RS28160	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ91_RS28165	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ91_RS28185	COG2010	Cytochrome c
CUJ91_RS28185	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ91_RS28190	COG2080	2 iron, 2 sulfur cluster binding
CUJ91_RS28235	COG1309	transcriptional regulator
CUJ91_RS28240	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUJ91_RS28245	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CUJ91_RS28255	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CUJ91_RS28270	COG0302	gtp cyclohydrolase
CUJ91_RS28275	COG0697	spore germination
CUJ91_RS28285	COG5001	Diguanylate cyclase
CUJ91_RS28285	COG2203	Gaf domain
CUJ91_RS28285	COG3706	GGDEF domain
CUJ91_RS28285	COG4251	negative regulation of phosphorylation
CUJ91_RS28295	COG0306	phosphate transporter
CUJ91_RS28315	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ91_RS28320	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS28325	COG1522	sequence-specific DNA binding
CUJ91_RS28330	COG3608	succinylglutamate desuccinylase aspartoacylase
CUJ91_RS28335	COG0006	proline dipeptidase activity
CUJ91_RS28340	COG2423	ornithine cyclodeaminase activity
CUJ91_RS28345	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CUJ91_RS28350	COG1725	Transcriptional regulator
CUJ91_RS28360	COG0765	amino acid transport
CUJ91_RS28365	COG0765	amino acid transport
CUJ91_RS28370	COG1126	abc transporter atp-binding protein
CUJ91_RS28375	COG0477	Major facilitator Superfamily
CUJ91_RS28425	COG2207	Transcriptional regulator
CUJ91_RS28425	COG1917	Cupin 2, conserved barrel domain protein
CUJ91_RS28430	COG1045	serine acetyltransferase
CUJ91_RS28460	COG3842	ATPase activity
CUJ91_RS28470	COG3386	PFAM SMP-30 Gluconolaconase
CUJ91_RS28495	COG2186	Transcriptional regulator
CUJ91_RS28500	COG0589	response to stress
CUJ91_RS28510	COG0567	Dehydrogenase, E1 component
CUJ91_RS28515	COG0840	transmembrane signaling receptor activity
CUJ91_RS28520	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CUJ91_RS28525	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CUJ91_RS28530	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS28550	COG2814	Major facilitator Superfamily
CUJ91_RS28555	COG0596	Alpha beta hydrolase
CUJ91_RS28565	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
CUJ91_RS28575	COG0601	transmembrane transport
CUJ91_RS28580	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ91_RS28585	COG0444	Belongs to the ABC transporter superfamily
CUJ91_RS28610	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CUJ91_RS28615	COG0784	Response regulator, receiver
CUJ91_RS28615	COG2205	protein histidine kinase activity
CUJ91_RS28625	COG1017	nitric oxide dioxygenase activity
CUJ91_RS28625	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CUJ91_RS28635	COG2831	hemolysin activation secretion protein
CUJ91_RS28640	COG5002	protein histidine kinase activity
CUJ91_RS28655	COG5295	Hep Hag repeat protein
CUJ91_RS28665	COG0784	Response regulator, receiver
CUJ91_RS28665	COG2205	protein histidine kinase activity
CUJ91_RS28665	COG5002	protein histidine kinase activity
CUJ91_RS28670	COG4774	siderophore transport
CUJ91_RS28675	COG3321	synthase
CUJ91_RS28675	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS28675	COG0604	alcohol dehydrogenase
CUJ91_RS28680	COG0583	DNA-binding transcription factor activity
CUJ91_RS28685	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS28690	COG3386	PFAM SMP-30 Gluconolaconase
CUJ91_RS28695	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS28700	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS28705	COG1129	ABC transporter
CUJ91_RS28710	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS28760	COG3284	Transcriptional regulator
CUJ91_RS28790	COG0596	Alpha beta hydrolase
CUJ91_RS28805	COG0596	Alpha beta hydrolase
CUJ91_RS28810	COG2205	protein histidine kinase activity
CUJ91_RS28830	COG2271	Major facilitator Superfamily
CUJ91_RS28835	COG0583	DNA-binding transcription factor activity
CUJ91_RS28840	COG2823	Periplasmic or secreted lipoprotein
CUJ91_RS28855	COG0395	ABC-type sugar transport system, permease component
CUJ91_RS28860	COG1063	alcohol dehydrogenase
CUJ91_RS28865	COG3842	ATPase activity
CUJ91_RS28875	COG1070	Carbohydrate kinase
CUJ91_RS28880	COG2203	Gaf domain
CUJ91_RS28880	COG3706	GGDEF domain
CUJ91_RS28880	COG5001	Diguanylate cyclase
CUJ91_RS28880	COG4251	negative regulation of phosphorylation
CUJ91_RS28890	COG0071	Belongs to the small heat shock protein (HSP20) family
CUJ91_RS28910	COG0459	protein refolding
CUJ91_RS28930	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS28960	COG0754	glutathionylspermidine amidase activity
CUJ91_RS28970	COG0840	transmembrane signaling receptor activity
CUJ91_RS28980	COG0477	Major facilitator Superfamily
CUJ91_RS29015	COG2851	Citrate transporter
CUJ91_RS29020	COG0583	DNA-binding transcription factor activity
CUJ91_RS29025	COG0596	Alpha beta hydrolase
CUJ91_RS29040	COG2175	clavaminate synthase activity
CUJ91_RS29050	COG1454	alcohol dehydrogenase
CUJ91_RS29075	COG0642	Histidine kinase
CUJ91_RS29080	COG0745	RESPONSE REGULATOR receiver
CUJ91_RS29085	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ91_RS29095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ91_RS29115	COG1562	ergosterol biosynthetic process
CUJ91_RS29125	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
CUJ91_RS29135	COG2367	Beta-lactamase
CUJ91_RS29175	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CUJ91_RS29180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ91_RS29190	COG1538	Outer membrane efflux protein
CUJ91_RS29210	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CUJ91_RS29215	COG0515	serine threonine protein kinase
CUJ91_RS29215	COG2815	serine threonine protein kinase
CUJ91_RS29245	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS29250	COG1522	sequence-specific DNA binding
CUJ91_RS29295	COG1737	Transcriptional regulator
CUJ91_RS29305	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS29320	COG0395	ABC-type sugar transport system, permease component
CUJ91_RS29335	COG2271	Major facilitator Superfamily
CUJ91_RS29340	COG0583	DNA-binding transcription factor activity
CUJ91_RS29355	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS29360	COG0765	amino acid transport
CUJ91_RS29365	COG1126	abc transporter atp-binding protein
CUJ91_RS29385	COG5001	Diguanylate cyclase
CUJ91_RS29385	COG3300	MHYT domain
CUJ91_RS29390	COG3842	ATPase activity
CUJ91_RS29395	COG3842	ATPase activity
CUJ91_RS29490	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUJ91_RS29520	COG4638	Rieske (2fe-2S)
CUJ91_RS29545	COG0154	amidase activity
CUJ91_RS29570	COG1024	Enoyl-CoA hydratase
CUJ91_RS29575	COG1960	acyl-CoA dehydrogenase activity
CUJ91_RS29630	COG2207	Transcriptional regulator
CUJ91_RS29630	COG1917	Cupin 2, conserved barrel domain protein
CUJ91_RS29650	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUJ91_RS29675	COG0583	DNA-binding transcription factor activity
CUJ91_RS29695	COG4941	Belongs to the sigma-70 factor family
CUJ91_RS29705	COG3795	YCII-related domain
CUJ91_RS29710	COG3795	YCII-related domain
CUJ91_RS29740	COG0667	Aldo Keto reductase
CUJ91_RS29745	COG1881	PFAM PEBP family protein
CUJ91_RS29755	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CUJ91_RS29775	COG3511	phospholipase C
CUJ91_RS29785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS29795	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS29820	COG3038	cytochrome b561
CUJ91_RS29840	COG0477	Major facilitator Superfamily
CUJ91_RS29855	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS29865	COG0028	Belongs to the TPP enzyme family
CUJ91_RS29870	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS29875	COG1414	Transcriptional regulator
CUJ91_RS29880	COG2226	methyltransferase
CUJ91_RS29880	COG1073	alpha beta
CUJ91_RS29915	COG1414	Transcriptional regulator
CUJ91_RS29965	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
CUJ91_RS29970	COG1254	Belongs to the acylphosphatase family
CUJ91_RS29975	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ91_RS29995	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CUJ91_RS30025	COG1657	PFAM Prenyltransferase squalene oxidase
CUJ91_RS30030	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CUJ91_RS30035	COG1562	ergosterol biosynthetic process
CUJ91_RS30075	COG1595	DNA-templated transcription, initiation
CUJ91_RS30085	COG3813	Protein conserved in bacteria
CUJ91_RS30135	COG1063	alcohol dehydrogenase
CUJ91_RS30140	COG2353	YceI-like domain
CUJ91_RS30175	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS30185	COG0583	DNA-binding transcription factor activity
CUJ91_RS30190	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CUJ91_RS30195	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CUJ91_RS30200	COG2271	Major facilitator Superfamily
CUJ91_RS30215	COG1802	Transcriptional regulator
CUJ91_RS30220	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CUJ91_RS30225	COG2271	Major facilitator Superfamily
CUJ91_RS30235	COG0247	lactate metabolic process
CUJ91_RS30260	COG3214	Protein conserved in bacteria
CUJ91_RS30295	COG2205	protein histidine kinase activity
CUJ91_RS30295	COG0784	Response regulator, receiver
CUJ91_RS30305	COG0251	oxidation-reduction process
CUJ91_RS30320	COG2610	gluconate transmembrane transporter activity
CUJ91_RS30325	COG3604	Transcriptional regulator
CUJ91_RS30350	COG1795	PFAM Formaldehyde-activating enzyme (Fae)
CUJ91_RS30355	COG0667	Aldo Keto reductase
CUJ91_RS30365	COG0477	Major facilitator Superfamily
CUJ91_RS30370	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CUJ91_RS30380	COG1042	CoA-binding domain protein
CUJ91_RS30380	COG0045	succinate-CoA ligase (ADP-forming) activity
CUJ91_RS30380	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUJ91_RS30415	COG1129	ABC transporter
CUJ91_RS30420	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS30425	COG2721	sulfolactate sulfo-lyase activity
CUJ91_RS30430	COG2721	sulfolactate sulfo-lyase activity
CUJ91_RS30445	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS30450	COG0179	Fumarylacetoacetate (FAA) hydrolase
CUJ91_RS30460	COG0840	transmembrane signaling receptor activity
CUJ91_RS30465	COG1278	Cold shock
CUJ91_RS30470	COG2942	2-epimerase
CUJ91_RS30475	COG1285	pathogenesis
CUJ91_RS30495	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUJ91_RS30500	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUJ91_RS30505	COG0840	transmembrane signaling receptor activity
CUJ91_RS30530	COG3842	ATPase activity
CUJ91_RS30540	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ91_RS30545	COG1177	transmembrane transport
CUJ91_RS30570	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CUJ91_RS30575	COG2079	MmgE PrpD family protein
CUJ91_RS30595	COG0039	L-malate dehydrogenase activity
CUJ91_RS30600	COG2188	Transcriptional regulator
CUJ91_RS30615	COG1053	succinate dehydrogenase
CUJ91_RS30620	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CUJ91_RS30625	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CUJ91_RS30630	COG0372	Belongs to the citrate synthase family
CUJ91_RS30645	COG2261	transglycosylase associated protein
CUJ91_RS30650	COG1349	DNA-binding transcription factor activity
CUJ91_RS30655	COG3959	Transketolase, thiamine diphosphate binding domain
CUJ91_RS30660	COG3958	Transketolase
CUJ91_RS30665	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS30670	COG1879	ABC-type sugar transport system periplasmic component
CUJ91_RS30680	COG1129	ABC transporter
CUJ91_RS30685	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS30690	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CUJ91_RS30700	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CUJ91_RS30710	COG1881	PFAM PEBP family protein
CUJ91_RS30725	COG1252	NADH dehydrogenase
CUJ91_RS30740	COG4689	acetoacetate decarboxylase
CUJ91_RS30745	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS30765	COG1595	DNA-templated transcription, initiation
CUJ91_RS30770	COG0583	DNA-binding transcription factor activity
CUJ91_RS30775	COG1764	response to oxidative stress
CUJ91_RS30785	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CUJ91_RS30795	COG0066	3-isopropylmalate dehydratase activity
CUJ91_RS30800	COG0473	3-isopropylmalate dehydrogenase activity
CUJ91_RS30815	COG0101	tRNA pseudouridine synthase activity
CUJ91_RS30820	COG0135	phosphoribosylanthranilate isomerase activity
CUJ91_RS30825	COG0133	tryptophan synthase activity
CUJ91_RS30835	COG0159	tryptophan synthase activity
CUJ91_RS30840	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CUJ91_RS30845	COG0285	dihydrofolate synthase activity
CUJ91_RS30885	COG1253	flavin adenine dinucleotide binding
CUJ91_RS30895	COG1640	4-alpha-glucanotransferase
CUJ91_RS30900	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CUJ91_RS30910	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CUJ91_RS30915	COG0366	Alpha amylase catalytic
CUJ91_RS30920	COG0366	Alpha amylase catalytic
CUJ91_RS30930	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CUJ91_RS30935	COG5654	RES domain protein
CUJ91_RS30940	COG5642	Protein of unknown function (DUF2384)
CUJ91_RS30950	COG0583	DNA-binding transcription factor activity
CUJ91_RS30955	COG1942	4-Oxalocrotonate Tautomerase
CUJ91_RS30965	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CUJ91_RS30970	COG4149	molybdate abc transporter
CUJ91_RS30975	COG0725	ABC transporter, periplasmic molybdate-binding protein
CUJ91_RS30995	COG0415	Belongs to the DNA photolyase family
CUJ91_RS31005	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CUJ91_RS31015	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CUJ91_RS31030	COG0583	DNA-binding transcription factor activity
CUJ91_RS31035	COG1611	Belongs to the LOG family
CUJ91_RS31045	COG1252	NADH dehydrogenase
CUJ91_RS31050	COG0412	Dienelactone hydrolase
CUJ91_RS31065	COG1722	exodeoxyribonuclease VII activity
CUJ91_RS31070	COG0142	geranyltranstransferase activity
CUJ91_RS31075	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CUJ91_RS31080	COG1469	GTP cyclohydrolase I activity
CUJ91_RS31085	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CUJ91_RS31090	COG2081	HI0933 family
CUJ91_RS31095	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CUJ91_RS31110	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CUJ91_RS31115	COG0583	DNA-binding transcription factor activity
CUJ91_RS31195	COG0583	DNA-binding transcription factor activity
CUJ91_RS31205	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CUJ91_RS31210	COG2423	ornithine cyclodeaminase activity
CUJ91_RS31240	COG0840	transmembrane signaling receptor activity
CUJ91_RS31290	COG0745	RESPONSE REGULATOR receiver
CUJ91_RS31295	COG5002	protein histidine kinase activity
CUJ91_RS31315	COG5001	Diguanylate cyclase
CUJ91_RS31315	COG3300	MHYT domain
CUJ91_RS31345	COG0587	DNA-directed DNA polymerase activity
CUJ91_RS31390	COG0745	RESPONSE REGULATOR receiver
CUJ91_RS31425	COG0546	phosphoglycolate phosphatase activity
CUJ91_RS31435	COG3158	transport of potassium into the cell
CUJ91_RS31475	COG2814	Major facilitator Superfamily
CUJ91_RS31500	COG1064	alcohol dehydrogenase
CUJ91_RS31545	COG0456	acetyltransferase
CUJ91_RS31555	COG0601	transmembrane transport
CUJ91_RS31560	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ91_RS31590	COG1473	amidohydrolase
CUJ91_RS31610	COG0583	DNA-binding transcription factor activity
CUJ91_RS31630	COG2175	clavaminate synthase activity
CUJ91_RS31640	COG0583	DNA-binding transcription factor activity
CUJ91_RS31655	COG2031	fatty acid transporter
CUJ91_RS31685	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CUJ91_RS31690	COG1902	pentaerythritol trinitrate reductase activity
CUJ91_RS31695	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CUJ91_RS31700	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUJ91_RS31715	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS31730	COG3284	Transcriptional regulator
CUJ91_RS31735	COG0730	response to heat
CUJ91_RS31740	COG0477	Major facilitator Superfamily
CUJ91_RS31765	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS31770	COG4569	acetaldehyde dehydrogenase (acetylating) activity
CUJ91_RS31775	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CUJ91_RS31800	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS31805	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS31825	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CUJ91_RS31830	COG1129	ABC transporter
CUJ91_RS31835	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS31845	COG1063	alcohol dehydrogenase
CUJ91_RS31850	COG1070	Carbohydrate kinase
CUJ91_RS31855	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CUJ91_RS31860	COG1349	DNA-binding transcription factor activity
CUJ91_RS31865	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS31875	COG1129	ABC transporter
CUJ91_RS31910	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CUJ91_RS31915	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CUJ91_RS31920	COG0402	S-adenosylhomocysteine deaminase activity
CUJ91_RS31925	COG2986	histidine ammonia-lyase
CUJ91_RS31930	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ91_RS31940	COG4160	amino acid transport
CUJ91_RS31975	COG0243	molybdopterin cofactor binding
CUJ91_RS31980	COG0437	4 iron, 4 sulfur cluster binding
CUJ91_RS31985	COG3302	dmso reductase anchor subunit
CUJ91_RS32025	COG4804	nuclease activity
CUJ91_RS32050	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CUJ91_RS32075	COG0642	Histidine kinase
CUJ91_RS32120	COG0071	Belongs to the small heat shock protein (HSP20) family
CUJ91_RS32125	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS32145	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CUJ91_RS32180	COG4716	Myosin-crossreactive antigen
CUJ91_RS32200	COG0589	response to stress
CUJ91_RS32210	COG3851	Histidine kinase
CUJ91_RS32225	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CUJ91_RS32305	COG0642	Histidine kinase
CUJ91_RS32320	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CUJ91_RS32335	COG1309	transcriptional regulator
CUJ91_RS32345	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CUJ91_RS32370	COG2814	Major facilitator Superfamily
CUJ91_RS32375	COG1902	pentaerythritol trinitrate reductase activity
CUJ91_RS32380	COG2010	Cytochrome c
CUJ91_RS32380	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ91_RS32385	COG2080	2 iron, 2 sulfur cluster binding
CUJ91_RS32390	COG2010	Cytochrome c
CUJ91_RS32390	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ91_RS32450	COG5001	Diguanylate cyclase
CUJ91_RS32450	COG2203	Gaf domain
CUJ91_RS32450	COG3706	GGDEF domain
CUJ91_RS32450	COG4251	negative regulation of phosphorylation
CUJ91_RS32470	COG3344	reverse transcriptase
CUJ91_RS32485	COG3483	tryptophan 2,3-dioxygenase activity
CUJ91_RS32495	COG0251	oxidation-reduction process
CUJ91_RS32505	COG0251	oxidation-reduction process
CUJ91_RS32530	COG0477	Major facilitator Superfamily
CUJ91_RS32545	COG4974	Belongs to the 'phage' integrase family
CUJ91_RS32550	COG0582	viral genome integration into host DNA
CUJ91_RS32555	COG4974	Belongs to the 'phage' integrase family
CUJ91_RS32610	COG2271	Major facilitator Superfamily
CUJ91_RS32620	COG3386	PFAM SMP-30 Gluconolaconase
CUJ91_RS32655	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS32660	COG1309	transcriptional regulator
CUJ91_RS32705	COG1475	DNA binding
CUJ91_RS32710	COG1192	Involved in chromosome partitioning
CUJ91_RS32735	COG3504	Conjugal transfer protein
CUJ91_RS32780	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CUJ91_RS32850	COG0629	single-stranded DNA binding
CUJ91_RS33060	COG3451	type IV secretory pathway VirB4
CUJ91_RS33105	COG0210	DNA helicase
CUJ91_RS33195	COG0210	DNA helicase
CUJ91_RS33215	COG2916	Histone family protein nucleoid-structuring protein H-NS
CUJ91_RS33300	COG0697	spore germination
CUJ91_RS33315	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CUJ91_RS33345	COG1309	transcriptional regulator
CUJ91_RS33355	COG3246	L-lysine catabolic process to acetate
CUJ91_RS33380	COG0477	Major facilitator Superfamily
CUJ91_RS33390	COG0154	amidase activity
CUJ91_RS33430	COG1403	HNH endonuclease
CUJ91_RS33480	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ91_RS33485	COG0477	Major facilitator Superfamily
CUJ91_RS33515	COG2271	Major facilitator Superfamily
CUJ91_RS33545	COG0671	phosphoesterase, PA-phosphatase related
CUJ91_RS33565	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
CUJ91_RS33580	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CUJ91_RS33585	COG0028	Belongs to the TPP enzyme family
CUJ91_RS33590	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CUJ91_RS33605	COG4120	Belongs to the binding-protein-dependent transport system permease family
CUJ91_RS33615	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CUJ91_RS33625	COG1012	belongs to the aldehyde dehydrogenase family
CUJ91_RS33665	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CUJ91_RS33690	COG2204	response regulator
CUJ91_RS33725	COG0438	transferase activity, transferring glycosyl groups
CUJ91_RS33740	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CUJ91_RS33745	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CUJ91_RS33755	COG3077	Addiction module antitoxin, RelB DinJ family
CUJ91_RS33780	COG0523	cobalamin synthesis protein
CUJ91_RS33805	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CUJ91_RS33810	COG4977	sequence-specific DNA binding
CUJ91_RS33835	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ91_RS33840	COG1335	isochorismatase
CUJ91_RS33850	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUJ91_RS33875	COG3618	amidohydrolase
CUJ91_RS33890	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ91_RS33910	COG1129	ABC transporter
CUJ91_RS33925	COG3386	PFAM SMP-30 Gluconolaconase