RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 PANTHER PTHR11615:SF114 276 783 7.2E-203 T 23-04-2016 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 PANTHER PTHR11615:SF114 57 257 7.2E-203 T 23-04-2016 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 PIRSF PIRSF000144 3 769 0.0 T 23-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 SUPERFAMILY SSF53706 53 635 2.09E-133 T 23-04-2016 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 Gene3D G3DSA:2.40.40.20 642 763 4.4E-7 T 23-04-2016 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 PANTHER PTHR11615 276 783 7.2E-203 T 23-04-2016 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 PANTHER PTHR11615 57 257 7.2E-203 T 23-04-2016 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 SUPERFAMILY SSF50692 648 767 3.62E-16 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 Pfam PF00384 Molybdopterin oxidoreductase 115 497 5.8E-27 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 19 765 4.1E-283 T 23-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 Gene3D G3DSA:3.40.228.10 188 398 3.2E-51 T 23-04-2016 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 Pfam PF01568 Molydopterin dinucleotide binding domain 652 759 1.7E-8 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 Gene3D G3DSA:3.40.50.740 115 187 7.9E-52 T 23-04-2016 RBRH_RS07950 aeac82feec2ee40af2f59ca4f1b47b1c 783 Gene3D G3DSA:3.40.50.740 399 632 7.9E-52 T 23-04-2016 RBRH_RS11755 19ad786deb48c260bbdafd982843e0af 217 SMART SM00796 4 202 7.1E-97 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D RBRH_RS11755 19ad786deb48c260bbdafd982843e0af 217 Pfam PF02682 Allophanate hydrolase subunit 1 5 200 2.4E-72 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D RBRH_RS11755 19ad786deb48c260bbdafd982843e0af 217 PANTHER PTHR34698 1 214 1.6E-84 T 23-04-2016 RBRH_RS11755 19ad786deb48c260bbdafd982843e0af 217 PANTHER PTHR34698:SF2 1 214 1.6E-84 T 23-04-2016 RBRH_RS11755 19ad786deb48c260bbdafd982843e0af 217 Gene3D G3DSA:2.40.100.10 88 211 6.3E-50 T 23-04-2016 IPR029000 Cyclophilin-like domain RBRH_RS11755 19ad786deb48c260bbdafd982843e0af 217 Gene3D G3DSA:3.30.1360.40 5 82 1.5E-14 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain RBRH_RS11755 19ad786deb48c260bbdafd982843e0af 217 SUPERFAMILY SSF50891 88 212 1.29E-44 T 23-04-2016 IPR029000 Cyclophilin-like domain RBRH_RS11755 19ad786deb48c260bbdafd982843e0af 217 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 1.4E-74 T 23-04-2016 IPR010016 KipI family RBRH_RS11755 19ad786deb48c260bbdafd982843e0af 217 SUPERFAMILY SSF160467 5 92 1.27E-13 T 23-04-2016 RBRH_RS09350 9c74822c931ea721532761c38a555698 420 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 411 6.1E-179 T 23-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RBRH_RS09350 9c74822c931ea721532761c38a555698 420 PIRSF PIRSF020818 1 420 3.0E-200 T 23-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RBRH_RS09350 9c74822c931ea721532761c38a555698 420 Gene3D G3DSA:3.40.50.1820 93 412 8.3E-7 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS09350 9c74822c931ea721532761c38a555698 420 SUPERFAMILY SSF53474 107 409 3.56E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS09350 9c74822c931ea721532761c38a555698 420 Pfam PF06850 PHB de-polymerase C-terminus 211 412 4.4E-96 T 23-04-2016 IPR009656 PHB de-polymerase, C-terminal RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 SUPERFAMILY SSF52317 154 373 2.6E-62 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 SUPERFAMILY SSF52021 7 144 9.02E-56 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 135 2.5E-50 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 SMART SM01097 6 136 1.5E-87 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 192 206 1.2E-38 T 23-04-2016 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 304 315 1.2E-38 T 23-04-2016 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 262 278 1.2E-38 T 23-04-2016 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 279 296 1.2E-38 T 23-04-2016 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 231 245 1.2E-38 T 23-04-2016 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 Pfam PF00117 Glutamine amidotransferase class-I 195 370 8.1E-46 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 PANTHER PTHR11405 6 379 4.1E-225 T 23-04-2016 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 373 1.0E-141 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 Gene3D G3DSA:3.50.30.20 7 146 1.2E-59 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 234 243 1.8E-9 T 23-04-2016 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 262 273 1.8E-9 T 23-04-2016 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 1.8E-9 T 23-04-2016 RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 Gene3D G3DSA:3.40.50.880 155 374 1.1E-77 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS03585 67a18b716d1477757098541f6bc328d0 386 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 376 47.965 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RBRH_RS11085 31a349f998a47c9ab450a30fddbe1f9c 199 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 190 35.377 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RBRH_RS11085 31a349f998a47c9ab450a30fddbe1f9c 199 Gene3D G3DSA:3.40.50.1470 1 198 1.5E-70 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RBRH_RS11085 31a349f998a47c9ab450a30fddbe1f9c 199 PANTHER PTHR17224 2 199 1.2E-74 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RBRH_RS11085 31a349f998a47c9ab450a30fddbe1f9c 199 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RBRH_RS11085 31a349f998a47c9ab450a30fddbe1f9c 199 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RBRH_RS11085 31a349f998a47c9ab450a30fddbe1f9c 199 SUPERFAMILY SSF53178 1 197 8.11E-66 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RBRH_RS11085 31a349f998a47c9ab450a30fddbe1f9c 199 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 197 9.2E-61 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RBRH_RS11085 31a349f998a47c9ab450a30fddbe1f9c 199 Pfam PF01195 Peptidyl-tRNA hydrolase 4 195 2.1E-55 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RBRH_RS11085 31a349f998a47c9ab450a30fddbe1f9c 199 PANTHER PTHR17224:SF1 2 199 1.2E-74 T 23-04-2016 RBRH_RS05035 edcc89ca31a93e2cc0cb2c64a9bbaab9 197 Gene3D G3DSA:3.40.50.360 1 196 2.5E-66 T 23-04-2016 IPR029039 Flavoprotein-like domain RBRH_RS05035 edcc89ca31a93e2cc0cb2c64a9bbaab9 197 PANTHER PTHR10204:SF16 1 197 2.8E-73 T 23-04-2016 RBRH_RS05035 edcc89ca31a93e2cc0cb2c64a9bbaab9 197 Pfam PF02525 Flavodoxin-like fold 3 195 1.2E-44 T 23-04-2016 IPR003680 Flavodoxin-like fold RBRH_RS05035 edcc89ca31a93e2cc0cb2c64a9bbaab9 197 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 197 31.614 T 23-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 RBRH_RS05035 edcc89ca31a93e2cc0cb2c64a9bbaab9 197 PANTHER PTHR10204 1 197 2.8E-73 T 23-04-2016 RBRH_RS05035 edcc89ca31a93e2cc0cb2c64a9bbaab9 197 SUPERFAMILY SSF52218 1 197 6.21E-56 T 23-04-2016 IPR029039 Flavoprotein-like domain RBRH_RS11850 0641e3b91046e6292ad2e3b1ed6e16d1 244 Pfam PF16357 Putative PepSY_TM-like 49 241 7.7E-18 T 23-04-2016 IPR032307 Putative PepSY TM-like protein RBRH_RS11850 0641e3b91046e6292ad2e3b1ed6e16d1 244 PANTHER PTHR40115 28 240 1.3E-17 T 23-04-2016 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 462 2.3E-97 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 Pfam PF01926 50S ribosome-binding GTPase 228 341 1.3E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 462 31.714 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 Gene3D G3DSA:1.20.120.430 258 280 1.7E-54 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 Gene3D G3DSA:1.20.120.430 131 191 1.7E-54 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 Gene3D G3DSA:1.20.120.430 391 462 1.7E-54 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 PANTHER PTHR11649 9 462 7.3E-138 T 23-04-2016 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 SUPERFAMILY SSF52540 206 378 9.16E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 SUPERFAMILY SSF52540 77 172 9.16E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 129 2.8E-33 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 SUPERFAMILY SSF116878 386 462 4.18E-47 T 23-04-2016 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 SUPERFAMILY SSF116878 130 229 4.18E-47 T 23-04-2016 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 Gene3D G3DSA:3.40.50.300 224 257 7.3E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 Gene3D G3DSA:3.30.1360.120 2 130 6.7E-39 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 Gene3D G3DSA:3.40.50.300 296 381 7.5E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 248 1.3E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 295 313 1.3E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 Pfam PF12631 MnmE helical domain 132 459 2.5E-54 T 23-04-2016 IPR025867 MnmE, helical domain RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 PANTHER PTHR11649:SF56 9 462 7.3E-138 T 23-04-2016 RBRH_RS12205 9cfe02dd206bce3ef8249995505ec455 462 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 355 1.5E-22 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 PANTHER PTHR23135 1 458 4.3E-231 T 23-04-2016 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 459 58.028 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 Pfam PF08245 Mur ligase middle domain 108 294 1.4E-24 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 PANTHER PTHR23135:SF17 1 458 4.3E-231 T 23-04-2016 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 Gene3D G3DSA:3.40.1190.10 92 315 8.2E-89 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 SUPERFAMILY SSF53623 98 311 8.63E-52 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 371 7.0E-8 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 458 4.2E-209 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 Pfam PF01225 Mur ligase family, catalytic domain 2 99 8.7E-17 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 SUPERFAMILY SSF53244 314 458 9.94E-33 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 Gene3D G3DSA:3.40.50.720 1 90 1.3E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 Gene3D G3DSA:3.90.190.20 316 458 1.7E-31 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01535 e668a6de1d2058ab7d3148b2029b6a57 464 SUPERFAMILY SSF51984 1 90 4.05E-20 T 23-04-2016 RBRH_RS05975 7be58a71cf77f5bf1b18b12105a4d857 125 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.856 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RBRH_RS05975 7be58a71cf77f5bf1b18b12105a4d857 125 SUPERFAMILY SSF54995 1 104 3.14E-38 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RBRH_RS05975 7be58a71cf77f5bf1b18b12105a4d857 125 PANTHER PTHR21011:SF1 1 117 1.9E-38 T 23-04-2016 RBRH_RS05975 7be58a71cf77f5bf1b18b12105a4d857 125 Pfam PF01250 Ribosomal protein S6 3 91 4.7E-29 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RBRH_RS05975 7be58a71cf77f5bf1b18b12105a4d857 125 Gene3D G3DSA:3.30.70.60 1 104 5.0E-43 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RBRH_RS05975 7be58a71cf77f5bf1b18b12105a4d857 125 PANTHER PTHR21011 1 117 1.9E-38 T 23-04-2016 RBRH_RS05975 7be58a71cf77f5bf1b18b12105a4d857 125 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 8.8E-35 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 SUPERFAMILY SSF47384 665 742 5.89E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Gene3D G3DSA:1.20.120.620 399 504 4.7E-36 T 23-04-2016 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 1.1E-95 T 23-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Pfam PF13492 GAF domain 531 652 2.3E-13 T 23-04-2016 IPR003018 GAF domain GO:0005515 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 SUPERFAMILY SSF55874 732 903 4.19E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 PANTHER PTHR24423 22 197 1.1E-139 T 23-04-2016 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 PANTHER PTHR24423 605 905 1.1E-139 T 23-04-2016 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 789 904 3.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Gene3D G3DSA:3.30.450.40 510 654 1.3E-4 T 23-04-2016 IPR029016 GAF domain-like RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 878 3.1E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 845 855 3.1E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 889 902 3.1E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 827 841 3.1E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 SMART SM00388 671 742 1.5E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 SUPERFAMILY SSF52402 251 371 5.34E-8 T 23-04-2016 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Gene3D G3DSA:3.30.565.10 728 904 2.1E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Pfam PF13493 Domain of unknown function (DUF4118) 404 508 8.2E-29 T 23-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Pfam PF00512 His Kinase A (phospho-acceptor) domain 672 742 4.3E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 SMART SM00387 786 905 4.9E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 PANTHER PTHR24423:SF562 22 197 1.1E-139 T 23-04-2016 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 PANTHER PTHR24423:SF562 605 905 1.1E-139 T 23-04-2016 RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Gene3D G3DSA:3.40.50.300 20 229 1.5E-98 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 SUPERFAMILY SSF52540 27 174 8.97E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 SUPERFAMILY SSF55781 511 664 9.42E-8 T 23-04-2016 IPR029016 GAF domain-like RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Gene3D G3DSA:3.40.50.620 245 371 1.6E-8 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS09210 b5f26c9fe7be6edb6c71c9e2f395a228 938 Gene3D G3DSA:1.10.287.130 667 727 2.9E-25 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 PANTHER PTHR11117:SF2 1 293 1.1E-161 T 23-04-2016 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 241 254 - T 23-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 SUPERFAMILY SSF51735 1 127 4.82E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 SMART SM00881 4 103 3.9E-28 T 23-04-2016 IPR003781 CoA-binding GO:0048037 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 Gene3D G3DSA:3.40.50.261 125 292 5.8E-71 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 PANTHER PTHR11117 1 293 1.1E-161 T 23-04-2016 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 PIRSF PIRSF001553 1 293 1.4E-116 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 293 8.5E-127 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 Gene3D G3DSA:3.40.50.720 2 124 8.9E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 Pfam PF00549 CoA-ligase 156 268 7.5E-15 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 157 186 - T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 SUPERFAMILY SSF52210 128 292 2.75E-52 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 Pfam PF02629 CoA binding domain 6 102 1.0E-22 T 23-04-2016 IPR003781 CoA-binding GO:0048037 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 PRINTS PR01798 Succinyl-CoA synthase signature 245 262 5.3E-32 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 PRINTS PR01798 Succinyl-CoA synthase signature 182 200 5.3E-32 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 5.3E-32 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RBRH_RS10270 ba008184f3d6fd17b3c75eb68eb1fe1a 293 PRINTS PR01798 Succinyl-CoA synthase signature 213 226 5.3E-32 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RBRH_RS15175 4ff4af7438c2eb85f3236fdf0d125497 59 Pfam PF00117 Glutamine amidotransferase class-I 2 58 1.6E-9 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RBRH_RS15175 4ff4af7438c2eb85f3236fdf0d125497 59 PANTHER PTHR11405 1 59 3.0E-29 T 23-04-2016 RBRH_RS15175 4ff4af7438c2eb85f3236fdf0d125497 59 Gene3D G3DSA:3.40.50.880 1 58 9.1E-19 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS15175 4ff4af7438c2eb85f3236fdf0d125497 59 SUPERFAMILY SSF52317 1 58 2.66E-13 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS03040 5fa8ca3af8601494393b333ed52b017b 249 PANTHER PTHR21294 1 249 1.5E-154 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RBRH_RS03040 5fa8ca3af8601494393b333ed52b017b 249 Gene3D G3DSA:3.40.50.620 1 247 2.0E-104 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS03040 5fa8ca3af8601494393b333ed52b017b 249 SUPERFAMILY SSF52402 1 242 1.26E-85 T 23-04-2016 RBRH_RS03040 5fa8ca3af8601494393b333ed52b017b 249 PANTHER PTHR21294:SF8 1 249 1.5E-154 T 23-04-2016 RBRH_RS03040 5fa8ca3af8601494393b333ed52b017b 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 23-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 RBRH_RS03040 5fa8ca3af8601494393b333ed52b017b 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 3.6E-45 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RBRH_RS03040 5fa8ca3af8601494393b333ed52b017b 249 SMART SM00893 23 211 3.0E-63 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RBRH_RS03040 5fa8ca3af8601494393b333ed52b017b 249 PIRSF PIRSF000090 1 249 9.2E-85 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RBRH_RS10005 a57059f3a0640b821dd93467d4708071 56 PIRSF PIRSF000071 1 56 2.2E-26 T 23-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 RBRH_RS10005 a57059f3a0640b821dd93467d4708071 56 Gene3D G3DSA:2.20.28.10 2 55 1.5E-26 T 23-04-2016 IPR004039 Rubredoxin-type fold RBRH_RS10005 a57059f3a0640b821dd93467d4708071 56 Pfam PF00301 Rubredoxin 6 51 1.2E-22 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RBRH_RS10005 a57059f3a0640b821dd93467d4708071 56 PRINTS PR00163 Rubredoxin signature 5 21 8.3E-8 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RBRH_RS10005 a57059f3a0640b821dd93467d4708071 56 PRINTS PR00163 Rubredoxin signature 35 51 8.3E-8 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RBRH_RS10005 a57059f3a0640b821dd93467d4708071 56 ProSitePatterns PS00202 Rubredoxin signature. 35 45 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RBRH_RS10005 a57059f3a0640b821dd93467d4708071 56 SUPERFAMILY SSF57802 2 55 3.03E-23 T 23-04-2016 RBRH_RS05915 d700bd31215f27cd661eb3933dac3b7d 191 Pfam PF05233 PHB accumulation regulatory domain 75 113 1.2E-18 T 23-04-2016 IPR007897 PHB accumulation regulatory RBRH_RS05915 d700bd31215f27cd661eb3933dac3b7d 191 Pfam PF05233 PHB accumulation regulatory domain 126 165 3.2E-16 T 23-04-2016 IPR007897 PHB accumulation regulatory RBRH_RS05915 d700bd31215f27cd661eb3933dac3b7d 191 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 11 70 7.2E-31 T 23-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal RBRH_RS05915 d700bd31215f27cd661eb3933dac3b7d 191 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 10 116 2.3E-45 T 23-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR RBRH_RS09230 ae5b4a9b01088ca083d9e035f26472e1 242 Gene3D G3DSA:3.30.70.980 135 205 1.3E-28 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 RBRH_RS09230 ae5b4a9b01088ca083d9e035f26472e1 242 Gene3D G3DSA:1.10.10.200 1 79 3.5E-35 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like RBRH_RS09230 ae5b4a9b01088ca083d9e035f26472e1 242 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 2.3E-95 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like RBRH_RS09230 ae5b4a9b01088ca083d9e035f26472e1 242 PANTHER PTHR12532 1 241 2.4E-113 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like RBRH_RS09230 ae5b4a9b01088ca083d9e035f26472e1 242 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.035 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like RBRH_RS09230 ae5b4a9b01088ca083d9e035f26472e1 242 SUPERFAMILY SSF75625 3 241 6.02E-97 T 23-04-2016 IPR029072 YebC-like RBRH_RS09230 ae5b4a9b01088ca083d9e035f26472e1 242 Pfam PF01709 Transcriptional regulator 5 237 9.4E-96 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like RBRH_RS09230 ae5b4a9b01088ca083d9e035f26472e1 242 Gene3D G3DSA:3.30.1270.10 82 134 2.3E-38 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RBRH_RS09230 ae5b4a9b01088ca083d9e035f26472e1 242 Gene3D G3DSA:3.30.1270.10 212 241 2.3E-38 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 PANTHER PTHR21262 57 801 0.0 T 23-04-2016 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 Pfam PF02824 TGS domain 472 531 1.1E-17 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 Pfam PF04607 Region found in RelA / SpoT proteins 319 428 5.0E-34 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 Pfam PF13291 ACT domain 721 798 5.0E-13 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 Pfam PF13328 HD domain 110 259 1.6E-51 T 23-04-2016 IPR003607 HD/PDEase domain RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 110 796 1.7E-221 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 SMART SM00471 125 237 2.9E-9 T 23-04-2016 IPR003607 HD/PDEase domain RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 PANTHER PTHR21262:SF0 57 801 0.0 T 23-04-2016 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 SUPERFAMILY SSF81271 459 531 8.07E-21 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 SUPERFAMILY SSF81301 265 476 1.24E-61 T 23-04-2016 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 Gene3D G3DSA:3.30.70.260 723 795 9.8E-6 T 23-04-2016 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 SUPERFAMILY SSF109604 91 272 1.95E-69 T 23-04-2016 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 SMART SM00954 319 429 5.4E-62 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 Gene3D G3DSA:3.10.20.30 472 532 2.2E-19 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS02760 656c59bf2129aad00e0fbc69013aa0bb 822 Gene3D G3DSA:3.30.460.10 276 408 3.3E-45 T 23-04-2016 RBRH_RS05235 177c132a1cf5cd0a03e53bb6070b9976 152 SMART SM00116 78 125 0.04 T 23-04-2016 IPR000644 CBS domain RBRH_RS05235 177c132a1cf5cd0a03e53bb6070b9976 152 SMART SM00116 13 60 4.2E-9 T 23-04-2016 IPR000644 CBS domain RBRH_RS05235 177c132a1cf5cd0a03e53bb6070b9976 152 Gene3D G3DSA:3.10.580.10 1 126 1.7E-28 T 23-04-2016 RBRH_RS05235 177c132a1cf5cd0a03e53bb6070b9976 152 PANTHER PTHR11911 1 140 1.8E-26 T 23-04-2016 RBRH_RS05235 177c132a1cf5cd0a03e53bb6070b9976 152 SUPERFAMILY SSF54631 1 143 3.79E-30 T 23-04-2016 RBRH_RS05235 177c132a1cf5cd0a03e53bb6070b9976 152 Pfam PF00571 CBS domain 72 125 3.3E-9 T 23-04-2016 IPR000644 CBS domain RBRH_RS05235 177c132a1cf5cd0a03e53bb6070b9976 152 Pfam PF00571 CBS domain 15 59 4.1E-9 T 23-04-2016 IPR000644 CBS domain RBRH_RS06465 5f7d208f9eb5f8ec333e8e7c9e6b6212 271 Pfam PF01148 Cytidylyltransferase family 4 270 5.0E-56 T 23-04-2016 RBRH_RS06465 5f7d208f9eb5f8ec333e8e7c9e6b6212 271 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 231 257 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 RBRH_RS06465 5f7d208f9eb5f8ec333e8e7c9e6b6212 271 PANTHER PTHR13773 1 270 1.2E-50 T 23-04-2016 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 Gene3D G3DSA:3.40.50.2300 473 592 1.1E-21 T 23-04-2016 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 PANTHER PTHR24423 49 55 5.8E-90 T 23-04-2016 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 PANTHER PTHR24423 222 593 5.8E-90 T 23-04-2016 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 448 4.5E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 Gene3D G3DSA:3.30.565.10 289 446 5.6E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 SUPERFAMILY SSF55874 279 446 1.57E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 SUPERFAMILY SSF52172 474 591 6.26E-23 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 SMART SM00448 475 586 7.5E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 Pfam PF00072 Response regulator receiver domain 478 585 6.9E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 SMART SM00387 335 450 6.9E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 SUPERFAMILY SSF47384 213 290 1.43E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 SMART SM00388 224 289 1.8E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 2.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 2.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 447 2.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 2.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 289 7.8E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS00215 7617a747b5b79984fda0b61e740660c9 595 Gene3D G3DSA:1.10.287.130 218 285 1.6E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS05565 85ebfedb5d361bae782a0628c6c48fbb 307 Pfam PF01734 Patatin-like phospholipase 52 209 6.8E-25 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RBRH_RS05565 85ebfedb5d361bae782a0628c6c48fbb 307 SUPERFAMILY SSF52151 43 301 2.43E-62 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RBRH_RS05565 85ebfedb5d361bae782a0628c6c48fbb 307 PANTHER PTHR14226:SF24 49 299 1.5E-75 T 23-04-2016 RBRH_RS05565 85ebfedb5d361bae782a0628c6c48fbb 307 PANTHER PTHR14226 49 299 1.5E-75 T 23-04-2016 RBRH_RS05565 85ebfedb5d361bae782a0628c6c48fbb 307 Gene3D G3DSA:3.40.1090.10 46 213 1.9E-17 T 23-04-2016 RBRH_RS03120 51cba9a950ee25fed113cf17a11828cd 204 PANTHER PTHR11046:SF1 20 193 3.7E-105 T 23-04-2016 RBRH_RS03120 51cba9a950ee25fed113cf17a11828cd 204 PANTHER PTHR11046 20 193 3.7E-105 T 23-04-2016 RBRH_RS03120 51cba9a950ee25fed113cf17a11828cd 204 Hamap MF_00045 Oligoribonuclease [orn]. 16 194 43.216 T 23-04-2016 IPR022894 Oligoribonuclease GO:0016788 RBRH_RS03120 51cba9a950ee25fed113cf17a11828cd 204 SUPERFAMILY SSF53098 17 193 1.28E-47 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS03120 51cba9a950ee25fed113cf17a11828cd 204 SMART SM00479 20 193 1.2E-21 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RBRH_RS03120 51cba9a950ee25fed113cf17a11828cd 204 Pfam PF00929 Exonuclease 22 183 6.2E-30 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RBRH_RS03120 51cba9a950ee25fed113cf17a11828cd 204 Gene3D G3DSA:3.30.420.10 17 192 2.1E-72 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS08765 2a95ad298f1e731e083328a12d60ba72 302 Gene3D G3DSA:3.40.50.150 48 293 4.5E-67 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS08765 2a95ad298f1e731e083328a12d60ba72 302 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 64 70 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RBRH_RS08765 2a95ad298f1e731e083328a12d60ba72 302 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 60 74 1.8E-33 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RBRH_RS08765 2a95ad298f1e731e083328a12d60ba72 302 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 241 259 1.8E-33 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RBRH_RS08765 2a95ad298f1e731e083328a12d60ba72 302 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 95 115 1.8E-33 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RBRH_RS08765 2a95ad298f1e731e083328a12d60ba72 302 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 264 284 1.8E-33 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RBRH_RS08765 2a95ad298f1e731e083328a12d60ba72 302 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 222 239 1.8E-33 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RBRH_RS08765 2a95ad298f1e731e083328a12d60ba72 302 Pfam PF01555 DNA methylase 61 280 8.3E-51 T 23-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RBRH_RS08765 2a95ad298f1e731e083328a12d60ba72 302 PANTHER PTHR13370 55 288 4.4E-35 T 23-04-2016 RBRH_RS08765 2a95ad298f1e731e083328a12d60ba72 302 SUPERFAMILY SSF53335 43 284 5.04E-67 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11955 37ef8b4fc8a2906a0beef632004ed5bd 299 PIRSF PIRSF000728 17 298 2.0E-100 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RBRH_RS11955 37ef8b4fc8a2906a0beef632004ed5bd 299 Gene3D G3DSA:3.40.1160.10 30 297 6.4E-100 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS11955 37ef8b4fc8a2906a0beef632004ed5bd 299 TIGRFAM TIGR00761 argB: acetylglutamate kinase 33 273 8.9E-73 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RBRH_RS11955 37ef8b4fc8a2906a0beef632004ed5bd 299 SUPERFAMILY SSF53633 15 298 6.02E-86 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS11955 37ef8b4fc8a2906a0beef632004ed5bd 299 Pfam PF00696 Amino acid kinase family 32 275 1.8E-43 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS11955 37ef8b4fc8a2906a0beef632004ed5bd 299 Hamap MF_00082_B Acetylglutamate kinase [argB]. 30 298 35.142 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RBRH_RS11955 37ef8b4fc8a2906a0beef632004ed5bd 299 PANTHER PTHR23342 7 297 4.0E-104 T 23-04-2016 RBRH_RS04805 45acd2eaea2f15d3414cf482b35e00e1 77 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 64 22.254 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RBRH_RS04805 45acd2eaea2f15d3414cf482b35e00e1 77 Pfam PF02416 mttA/Hcf106 family 5 53 8.1E-13 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RBRH_RS04805 45acd2eaea2f15d3414cf482b35e00e1 77 PANTHER PTHR33162 1 47 6.9E-16 T 23-04-2016 RBRH_RS04805 45acd2eaea2f15d3414cf482b35e00e1 77 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 4.5E-23 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 Pfam PF00342 Phosphoglucose isomerase 52 532 2.8E-196 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 486 503 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 Gene3D G3DSA:3.40.50.10490 288 495 2.1E-128 T 23-04-2016 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 Gene3D G3DSA:3.40.50.10490 6 98 2.1E-128 T 23-04-2016 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 486 499 1.154064E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 256 274 1.154064E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 472 486 1.154064E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 454 472 1.154064E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 144 163 1.154064E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 333 354 1.154064E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 513 40.103 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 PANTHER PTHR11469 1 541 1.6E-262 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 Gene3D G3DSA:3.40.50.10490 110 285 3.2E-74 T 23-04-2016 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 260 273 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 Gene3D G3DSA:1.10.1390.10 496 537 8.1E-16 T 23-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS07080 fe79645df72c899bd87711b4eb4f78d4 541 SUPERFAMILY SSF53697 2 536 1.08E-197 T 23-04-2016 RBRH_RS09870 85d8763a352b57efaac9b1901269205c 629 PANTHER PTHR10366:SF256 284 601 4.5E-118 T 23-04-2016 RBRH_RS09870 85d8763a352b57efaac9b1901269205c 629 PANTHER PTHR10366 284 601 4.5E-118 T 23-04-2016 RBRH_RS09870 85d8763a352b57efaac9b1901269205c 629 Gene3D G3DSA:3.90.25.10 467 574 1.9E-7 T 23-04-2016 RBRH_RS09870 85d8763a352b57efaac9b1901269205c 629 Gene3D G3DSA:3.40.50.720 284 466 1.1E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09870 85d8763a352b57efaac9b1901269205c 629 Pfam PF02719 Polysaccharide biosynthesis protein 285 568 4.0E-118 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RBRH_RS09870 85d8763a352b57efaac9b1901269205c 629 SUPERFAMILY SSF53335 114 330 4.48E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS09870 85d8763a352b57efaac9b1901269205c 629 Gene3D G3DSA:3.40.50.720 143 264 6.8E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09870 85d8763a352b57efaac9b1901269205c 629 Pfam PF13727 CoA-binding domain 62 221 6.4E-10 T 23-04-2016 RBRH_RS09870 85d8763a352b57efaac9b1901269205c 629 SUPERFAMILY SSF51735 283 589 1.48E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS04850 f3db32bcb9461c03730f7cd0be1814f6 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 8.6E-18 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RBRH_RS04850 f3db32bcb9461c03730f7cd0be1814f6 203 PANTHER PTHR11260:SF44 1 203 1.4E-62 T 23-04-2016 RBRH_RS04850 f3db32bcb9461c03730f7cd0be1814f6 203 PANTHER PTHR11260 1 203 1.4E-62 T 23-04-2016 RBRH_RS04850 f3db32bcb9461c03730f7cd0be1814f6 203 SUPERFAMILY SSF52833 1 101 2.86E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS04850 f3db32bcb9461c03730f7cd0be1814f6 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 188 1.1E-7 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal RBRH_RS04850 f3db32bcb9461c03730f7cd0be1814f6 203 Gene3D G3DSA:3.40.30.10 1 90 2.1E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS04850 f3db32bcb9461c03730f7cd0be1814f6 203 Gene3D G3DSA:1.20.1050.10 91 194 8.2E-19 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RBRH_RS04850 f3db32bcb9461c03730f7cd0be1814f6 203 SUPERFAMILY SSF47616 80 200 2.42E-23 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 SMART SM01091 352 430 9.6E-17 T 23-04-2016 IPR005170 Transporter-associated domain RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 Pfam PF00571 CBS domain 287 337 2.1E-4 T 23-04-2016 IPR000644 CBS domain RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 Pfam PF00571 CBS domain 241 273 0.0047 T 23-04-2016 IPR000644 CBS domain RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 Pfam PF01595 Domain of unknown function DUF21 9 202 2.5E-45 T 23-04-2016 IPR002550 Domain of unknown function DUF21 RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 PANTHER PTHR22777 1 426 5.5E-146 T 23-04-2016 RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 PANTHER PTHR22777:SF18 1 426 5.5E-146 T 23-04-2016 RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 Pfam PF03471 Transporter associated domain 353 426 7.5E-14 T 23-04-2016 IPR005170 Transporter-associated domain RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 SUPERFAMILY SSF54631 207 340 2.78E-20 T 23-04-2016 RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 Gene3D G3DSA:3.30.465.10 350 428 2.6E-17 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 SUPERFAMILY SSF56176 351 431 6.27E-14 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS02385 c32fc69ed9f432bd027fed7aa6900d05 436 Gene3D G3DSA:3.10.580.10 209 346 3.0E-11 T 23-04-2016 RBRH_RS05795 4423420580376e9d7d91e62b8788dd43 455 PANTHER PTHR30454 2 432 7.3E-137 T 23-04-2016 RBRH_RS05795 4423420580376e9d7d91e62b8788dd43 455 Pfam PF04551 GcpE protein 44 425 2.9E-108 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RBRH_RS05795 4423420580376e9d7d91e62b8788dd43 455 PIRSF PIRSF004640 25 435 1.6E-125 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RBRH_RS05795 4423420580376e9d7d91e62b8788dd43 455 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 31 424 2.5E-113 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RBRH_RS05795 4423420580376e9d7d91e62b8788dd43 455 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 33 427 27.581 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 SUPERFAMILY SSF47819 541 615 4.36E-22 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 SMART SM00490 251 332 2.7E-23 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 Pfam PF00270 DEAD/DEAH box helicase 21 180 1.4E-17 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 SMART SM00956 412 519 8.2E-53 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 Pfam PF09382 RQC domain 407 522 3.0E-39 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 Gene3D G3DSA:1.10.10.10 346 522 2.1E-58 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 PANTHER PTHR13710:SF81 1 615 5.2E-272 T 23-04-2016 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 Gene3D G3DSA:1.10.150.80 548 614 8.4E-14 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 SUPERFAMILY SSF52540 5 200 1.56E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 SMART SM00487 13 213 5.5E-28 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 Gene3D G3DSA:3.40.50.300 201 345 5.5E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 466 8.4E-148 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 PANTHER PTHR13710 1 615 5.2E-272 T 23-04-2016 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 Gene3D G3DSA:3.40.50.300 3 199 8.3E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 SMART SM00341 543 616 5.6E-12 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 614 6.9E-233 T 23-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 SUPERFAMILY SSF52540 203 463 6.59E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 Pfam PF16124 RecQ zinc-binding 344 405 3.5E-17 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 Pfam PF00570 HRDC domain 546 613 4.4E-22 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RBRH_RS04365 01f2bf222894c95754ebc6be237fba54 616 Pfam PF00271 Helicase conserved C-terminal domain 238 332 2.8E-13 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 PANTHER PTHR11079:SF10 1 213 2.7E-56 T 23-04-2016 RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 360 1.7E-108 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 SUPERFAMILY SSF53597 151 364 3.78E-61 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 105 1.4E-18 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 364 6.9E-54 T 23-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 PIRSF PIRSF006769 1 368 1.6E-119 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 PANTHER PTHR11079 1 213 2.7E-56 T 23-04-2016 RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 Pfam PF01872 RibD C-terminal domain 153 359 2.6E-47 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 Gene3D G3DSA:3.40.140.10 6 134 4.0E-31 T 23-04-2016 RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 SUPERFAMILY SSF53927 6 150 8.53E-46 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RBRH_RS09700 75537e3cae1278b0fa1e9d6659ba7859 382 Gene3D G3DSA:3.40.430.10 135 367 1.4E-75 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain RBRH_RS05050 a1d557621828f57b2c5f7ecb9b724dad 268 PANTHER PTHR22854:SF2 1 262 4.4E-110 T 23-04-2016 RBRH_RS05050 a1d557621828f57b2c5f7ecb9b724dad 268 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 263 35.718 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RBRH_RS05050 a1d557621828f57b2c5f7ecb9b724dad 268 Gene3D G3DSA:3.20.20.70 1 264 3.0E-111 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS05050 a1d557621828f57b2c5f7ecb9b724dad 268 SUPERFAMILY SSF51366 13 263 4.83E-86 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RBRH_RS05050 a1d557621828f57b2c5f7ecb9b724dad 268 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 57 75 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RBRH_RS05050 a1d557621828f57b2c5f7ecb9b724dad 268 PANTHER PTHR22854 1 262 4.4E-110 T 23-04-2016 RBRH_RS05050 a1d557621828f57b2c5f7ecb9b724dad 268 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 3.4E-95 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 PANTHER PTHR22939 62 84 2.9E-128 T 23-04-2016 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 PANTHER PTHR22939 100 386 2.9E-128 T 23-04-2016 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 Gene3D G3DSA:2.40.10.10 63 179 5.2E-37 T 23-04-2016 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 SUPERFAMILY SSF50156 308 388 1.86E-22 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 SUPERFAMILY SSF50156 242 268 1.86E-22 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 SMART SM00228 291 373 7.1E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 Pfam PF13365 Trypsin-like peptidase domain 118 252 1.3E-32 T 23-04-2016 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 SUPERFAMILY SSF50494 43 84 1.13E-63 T 23-04-2016 IPR009003 Peptidase S1, PA clan RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 SUPERFAMILY SSF50494 115 301 1.13E-63 T 23-04-2016 IPR009003 Peptidase S1, PA clan RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 63 386 2.8E-128 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 Gene3D G3DSA:2.30.42.10 293 387 4.4E-27 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 Pfam PF13180 PDZ domain 291 381 2.0E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 PANTHER PTHR22939:SF93 62 84 2.9E-128 T 23-04-2016 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 PANTHER PTHR22939:SF93 100 386 2.9E-128 T 23-04-2016 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 Gene3D G3DSA:2.40.10.10 180 292 1.0E-42 T 23-04-2016 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 PRINTS PR00834 HtrA/DegQ protease family signature 127 139 6.6E-55 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 6.6E-55 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 6.6E-55 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 6.6E-55 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 6.6E-55 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS04820 f3e14c47a4755223832f35ea205ce576 400 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 6.6E-55 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 262 3.5E-76 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 95 8.6E-16 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 SUPERFAMILY SSF48179 158 266 4.93E-33 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 263 26.488 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 Gene3D G3DSA:3.40.50.720 1 155 3.7E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 218 241 - T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 SUPERFAMILY SSF51735 1 156 7.25E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 PANTHER PTHR11645 1 270 5.0E-91 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 PANTHER PTHR11645:SF0 1 270 5.0E-91 T 23-04-2016 RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 PIRSF PIRSF000193 1 266 4.1E-72 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 Gene3D G3DSA:1.10.3730.10 158 263 4.9E-33 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RBRH_RS01785 a1dddf5424661961527dcca8f9ddfd20 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 2.2E-31 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RBRH_RS05695 5a31001360fec1c9fe86514bd63bea9d 88 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 1.4E-20 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05695 5a31001360fec1c9fe86514bd63bea9d 88 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 70 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05695 5a31001360fec1c9fe86514bd63bea9d 88 PANTHER PTHR33280 1 79 7.2E-30 T 23-04-2016 RBRH_RS05695 5a31001360fec1c9fe86514bd63bea9d 88 SUPERFAMILY SSF143800 1 80 3.65E-21 T 23-04-2016 RBRH_RS05695 5a31001360fec1c9fe86514bd63bea9d 88 PANTHER PTHR33280:SF2 1 79 7.2E-30 T 23-04-2016 RBRH_RS05695 5a31001360fec1c9fe86514bd63bea9d 88 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.4E-7 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05695 5a31001360fec1c9fe86514bd63bea9d 88 PRINTS PR01249 Ribosomal protein L31 signature 44 59 5.4E-7 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05695 5a31001360fec1c9fe86514bd63bea9d 88 Pfam PF01197 Ribosomal protein L31 1 79 2.4E-29 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS11970 f9f9328cfbf03052d43fb9d8febf6c53 202 SUPERFAMILY SSF53335 10 187 1.38E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11970 f9f9328cfbf03052d43fb9d8febf6c53 202 Pfam PF07021 Methionine biosynthesis protein MetW 12 199 1.8E-77 T 23-04-2016 IPR010743 Methionine biosynthesis MetW RBRH_RS11970 f9f9328cfbf03052d43fb9d8febf6c53 202 Gene3D G3DSA:3.40.50.150 17 183 4.8E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11970 f9f9328cfbf03052d43fb9d8febf6c53 202 PANTHER PTHR10108 1 175 8.4E-47 T 23-04-2016 RBRH_RS11970 f9f9328cfbf03052d43fb9d8febf6c53 202 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 12 200 5.7E-79 T 23-04-2016 IPR010743 Methionine biosynthesis MetW RBRH_RS11970 f9f9328cfbf03052d43fb9d8febf6c53 202 PANTHER PTHR10108:SF831 1 175 8.4E-47 T 23-04-2016 RBRH_RS09100 f82a1b3313590ac3be4f9305abfe0557 334 Gene3D G3DSA:3.90.180.10 1 157 2.8E-36 T 23-04-2016 IPR011032 GroES-like RBRH_RS09100 f82a1b3313590ac3be4f9305abfe0557 334 Pfam PF00107 Zinc-binding dehydrogenase 160 275 4.3E-31 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RBRH_RS09100 f82a1b3313590ac3be4f9305abfe0557 334 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 334 8.8E-143 T 23-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- RBRH_RS09100 f82a1b3313590ac3be4f9305abfe0557 334 PANTHER PTHR11695:SF610 15 333 1.7E-119 T 23-04-2016 RBRH_RS09100 f82a1b3313590ac3be4f9305abfe0557 334 SUPERFAMILY SSF50129 1 144 5.63E-37 T 23-04-2016 IPR011032 GroES-like RBRH_RS09100 f82a1b3313590ac3be4f9305abfe0557 334 SMART SM00829 10 332 9.0E-42 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RBRH_RS09100 f82a1b3313590ac3be4f9305abfe0557 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 91 1.8E-5 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RBRH_RS09100 f82a1b3313590ac3be4f9305abfe0557 334 PANTHER PTHR11695 15 333 1.7E-119 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RBRH_RS09100 f82a1b3313590ac3be4f9305abfe0557 334 Gene3D G3DSA:3.40.50.720 158 271 7.6E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09100 f82a1b3313590ac3be4f9305abfe0557 334 SUPERFAMILY SSF51735 115 297 7.25E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS05080 65d6e6d95fc03cf1d834ad26f553731d 124 PANTHER PTHR14289 8 121 1.5E-40 T 23-04-2016 RBRH_RS05080 65d6e6d95fc03cf1d834ad26f553731d 124 Pfam PF04379 Protein of unknown function (DUF525) 17 101 4.8E-34 T 23-04-2016 IPR007474 ApaG domain RBRH_RS05080 65d6e6d95fc03cf1d834ad26f553731d 124 SUPERFAMILY SSF110069 5 124 5.49E-45 T 23-04-2016 IPR007474 ApaG domain RBRH_RS05080 65d6e6d95fc03cf1d834ad26f553731d 124 Gene3D G3DSA:2.60.40.1470 5 124 1.3E-44 T 23-04-2016 IPR007474 ApaG domain RBRH_RS05080 65d6e6d95fc03cf1d834ad26f553731d 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 30.529 T 23-04-2016 IPR023065 Uncharacterised protein family ApaG RBRH_RS07695 e6d286572e66213f203220afac31b2af 181 SUPERFAMILY SSF55811 2 166 1.49E-41 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS07695 e6d286572e66213f203220afac31b2af 181 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RBRH_RS07695 e6d286572e66213f203220afac31b2af 181 Gene3D G3DSA:3.90.79.10 36 162 1.2E-33 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS07695 e6d286572e66213f203220afac31b2af 181 Pfam PF00293 NUDIX domain 38 141 1.6E-13 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RBRH_RS07695 e6d286572e66213f203220afac31b2af 181 PRINTS PR00502 NUDIX hydrolase family signature 65 79 5.3E-5 T 23-04-2016 IPR020476 NUDIX hydrolase RBRH_RS07695 e6d286572e66213f203220afac31b2af 181 PRINTS PR00502 NUDIX hydrolase family signature 79 94 5.3E-5 T 23-04-2016 IPR020476 NUDIX hydrolase RBRH_RS07695 e6d286572e66213f203220afac31b2af 181 PANTHER PTHR22769 1 174 6.5E-81 T 23-04-2016 RBRH_RS07695 e6d286572e66213f203220afac31b2af 181 Pfam PF14803 Nudix N-terminal 2 35 3.4E-17 T 23-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- RBRH_RS07695 e6d286572e66213f203220afac31b2af 181 Gene3D G3DSA:2.20.70.10 1 35 3.3E-19 T 23-04-2016 RBRH_RS07695 e6d286572e66213f203220afac31b2af 181 PANTHER PTHR22769:SF17 1 174 6.5E-81 T 23-04-2016 RBRH_RS09205 9c19faa45febe20ee5a4999e2b437bbd 232 SMART SM00448 6 116 1.7E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS09205 9c19faa45febe20ee5a4999e2b437bbd 232 SUPERFAMILY SSF52172 4 125 7.83E-37 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS09205 9c19faa45febe20ee5a4999e2b437bbd 232 PANTHER PTHR26402:SF516 6 230 2.2E-95 T 23-04-2016 RBRH_RS09205 9c19faa45febe20ee5a4999e2b437bbd 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.8E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS09205 9c19faa45febe20ee5a4999e2b437bbd 232 PANTHER PTHR26402 6 230 2.2E-95 T 23-04-2016 RBRH_RS09205 9c19faa45febe20ee5a4999e2b437bbd 232 SUPERFAMILY SSF46894 128 228 2.24E-28 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RBRH_RS09205 9c19faa45febe20ee5a4999e2b437bbd 232 Gene3D G3DSA:3.40.50.2300 3 125 1.1E-35 T 23-04-2016 RBRH_RS09205 9c19faa45febe20ee5a4999e2b437bbd 232 Gene3D G3DSA:1.10.10.10 131 229 2.0E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS09205 9c19faa45febe20ee5a4999e2b437bbd 232 Pfam PF00072 Response regulator receiver domain 8 117 2.0E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS09205 9c19faa45febe20ee5a4999e2b437bbd 232 SMART SM00862 152 228 5.4E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 626 1.7E-208 T 23-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 SUPERFAMILY SSF54862 76 211 7.11E-36 T 23-04-2016 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 PANTHER PTHR11615 439 546 2.6E-165 T 23-04-2016 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 Pfam PF00384 Molybdopterin oxidoreductase 517 626 2.5E-13 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 Pfam PF00384 Molybdopterin oxidoreductase 273 414 1.7E-18 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 121 3.9E-16 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 Gene3D G3DSA:3.10.20.30 2 55 2.7E-6 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 SUPERFAMILY SSF54292 1 74 4.5E-20 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 PANTHER PTHR11615:SF115 439 546 2.6E-165 T 23-04-2016 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 2.3E-20 T 23-04-2016 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 SMART SM00929 83 123 7.4E-20 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 PANTHER PTHR11615 3 374 2.6E-165 T 23-04-2016 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 PANTHER PTHR11615 575 643 2.6E-165 T 23-04-2016 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 Gene3D G3DSA:3.40.50.740 520 651 7.7E-51 T 23-04-2016 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 Gene3D G3DSA:3.40.50.740 273 412 7.7E-51 T 23-04-2016 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 SUPERFAMILY SSF53706 214 652 3.37E-91 T 23-04-2016 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 PANTHER PTHR11615:SF115 3 374 2.6E-165 T 23-04-2016 RBRH_RS09050 aa70b0c4658375b3ceaa5980ccc2e9c5 776 PANTHER PTHR11615:SF115 575 643 2.6E-165 T 23-04-2016 RBRH_RS11920 c5195e37ff5517b45dc40cc3e33d1ef9 139 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 102 126 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RBRH_RS11920 c5195e37ff5517b45dc40cc3e33d1ef9 139 PANTHER PTHR33823 1 135 7.5E-35 T 23-04-2016 RBRH_RS11920 c5195e37ff5517b45dc40cc3e33d1ef9 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 131 9.3E-11 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RBRH_RS11920 c5195e37ff5517b45dc40cc3e33d1ef9 139 SUPERFAMILY SSF57716 99 137 2.42E-8 T 23-04-2016 RBRH_RS11920 c5195e37ff5517b45dc40cc3e33d1ef9 139 PANTHER PTHR33823:SF2 1 135 7.5E-35 T 23-04-2016 RBRH_RS11920 c5195e37ff5517b45dc40cc3e33d1ef9 139 SUPERFAMILY SSF109635 3 98 3.66E-29 T 23-04-2016 RBRH_RS11920 c5195e37ff5517b45dc40cc3e33d1ef9 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 17 138 28.03 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RBRH_RS11920 c5195e37ff5517b45dc40cc3e33d1ef9 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 129 1.1E-42 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RBRH_RS09075 f6c77bba868853af823e43f57939b902 159 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 2.6E-22 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RBRH_RS09075 f6c77bba868853af823e43f57939b902 159 PANTHER PTHR11995 11 156 3.0E-122 T 23-04-2016 RBRH_RS09075 f6c77bba868853af823e43f57939b902 159 Gene3D G3DSA:3.40.50.700 21 148 4.7E-32 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RBRH_RS09075 f6c77bba868853af823e43f57939b902 159 PANTHER PTHR11995:SF19 11 156 3.0E-122 T 23-04-2016 RBRH_RS09075 f6c77bba868853af823e43f57939b902 159 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 1.6E-77 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RBRH_RS09075 f6c77bba868853af823e43f57939b902 159 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RBRH_RS09075 f6c77bba868853af823e43f57939b902 159 SUPERFAMILY SSF56770 9 153 1.09E-66 T 23-04-2016 RBRH_RS09075 f6c77bba868853af823e43f57939b902 159 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.015 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 9.6E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.6E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 9.6E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.6E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 9.6E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 9.6E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 3.1E-38 T 23-04-2016 RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PANTHER PTHR24322:SF25 12 138 6.9E-65 T 23-04-2016 RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PANTHER PTHR24322:SF25 154 186 6.9E-65 T 23-04-2016 RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 Gene3D G3DSA:3.40.50.720 2 259 1.7E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 SUPERFAMILY SSF51735 1 259 7.83E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PANTHER PTHR24322 12 138 6.9E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PANTHER PTHR24322 154 186 6.9E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.0E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.0E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05440 8b5d8f45d98ff5e2bd703ce47f0efd14 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.0E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01505 ea1f998bc78bce54269dde5102565294 299 Gene3D G3DSA:3.40.50.150 108 291 1.0E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01505 ea1f998bc78bce54269dde5102565294 299 SUPERFAMILY SSF53335 88 292 7.06E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01505 ea1f998bc78bce54269dde5102565294 299 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 296 32.121 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RBRH_RS01505 ea1f998bc78bce54269dde5102565294 299 PANTHER PTHR18895 16 299 1.6E-79 T 23-04-2016 RBRH_RS01505 ea1f998bc78bce54269dde5102565294 299 PANTHER PTHR18895:SF69 16 299 1.6E-79 T 23-04-2016 RBRH_RS01505 ea1f998bc78bce54269dde5102565294 299 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 289 7.9E-70 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RBRH_RS01505 ea1f998bc78bce54269dde5102565294 299 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 296 2.8E-89 T 23-04-2016 RBRH_RS01505 ea1f998bc78bce54269dde5102565294 299 PIRSF PIRSF000401 1 298 1.6E-94 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 SUPERFAMILY SSF53732 8 629 2.75E-214 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 Gene3D G3DSA:3.40.1060.10 250 368 3.3E-35 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 Gene3D G3DSA:3.30.499.10 369 579 7.8E-64 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PANTHER PTHR11670:SF1 420 654 0.0 T 23-04-2016 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PANTHER PTHR11670:SF1 672 717 0.0 T 23-04-2016 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PANTHER PTHR11670:SF1 762 904 0.0 T 23-04-2016 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PANTHER PTHR11670:SF1 1 394 0.0 T 23-04-2016 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PRINTS PR00415 Aconitase family signature 293 306 1.8E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PRINTS PR00415 Aconitase family signature 217 232 1.8E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PRINTS PR00415 Aconitase family signature 373 387 1.8E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PRINTS PR00415 Aconitase family signature 279 292 1.8E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PRINTS PR00415 Aconitase family signature 170 178 1.8E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PRINTS PR00415 Aconitase family signature 203 216 1.8E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PRINTS PR00415 Aconitase family signature 435 446 1.8E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PRINTS PR00415 Aconitase family signature 146 159 1.8E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PRINTS PR00415 Aconitase family signature 497 510 1.8E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PANTHER PTHR11670 420 654 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PANTHER PTHR11670 672 717 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PANTHER PTHR11670 762 904 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 PANTHER PTHR11670 1 394 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 Gene3D G3DSA:3.30.499.10 21 249 2.4E-76 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 902 0.0 T 23-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 Gene3D G3DSA:3.20.19.10 640 902 2.8E-76 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 ProSitePatterns PS00450 Aconitase family signature 1. 431 447 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 Pfam PF00330 Aconitase family (aconitate hydratase) 69 566 5.9E-177 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 ProSitePatterns PS01244 Aconitase family signature 2. 497 510 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 SUPERFAMILY SSF52016 639 902 2.16E-79 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RBRH_RS08860 7e627b7b0cfbbc3023f79369949b68aa 904 Pfam PF00694 Aconitase C-terminal domain 698 830 1.2E-41 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 Pfam PF00994 Probable molybdopterin binding domain 184 333 3.9E-23 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 Gene3D G3DSA:2.40.340.10 350 416 2.8E-7 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 Gene3D G3DSA:2.170.190.11 53 144 1.4E-28 T 23-04-2016 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 PANTHER PTHR10192:SF17 3 419 4.3E-130 T 23-04-2016 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 SMART SM00852 183 335 2.6E-42 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 SUPERFAMILY SSF63882 4 179 4.45E-50 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 SUPERFAMILY SSF63867 345 416 3.79E-13 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 PANTHER PTHR10192 3 419 4.3E-130 T 23-04-2016 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 Gene3D G3DSA:3.40.980.10 165 349 9.5E-62 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 Pfam PF03453 MoeA N-terminal region (domain I and II) 7 170 4.3E-35 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 SUPERFAMILY SSF53218 180 339 1.07E-38 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 Gene3D G3DSA:3.90.105.10 145 164 9.2E-21 T 23-04-2016 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 Gene3D G3DSA:3.90.105.10 29 52 9.2E-21 T 23-04-2016 RBRH_RS06080 9ffcee264d30932d95863ffe1129eab3 420 Pfam PF03454 MoeA C-terminal region (domain IV) 355 415 4.7E-9 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS05835 36d05dc04ed6ae264e21baed48fe42d7 305 PIRSF PIRSF005651 1 291 6.5E-92 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RBRH_RS05835 36d05dc04ed6ae264e21baed48fe42d7 305 SMART SM00244 20 185 1.8E-25 T 23-04-2016 IPR001107 Band 7 domain RBRH_RS05835 36d05dc04ed6ae264e21baed48fe42d7 305 SUPERFAMILY SSF117892 54 190 1.22E-26 T 23-04-2016 IPR001107 Band 7 domain RBRH_RS05835 36d05dc04ed6ae264e21baed48fe42d7 305 PANTHER PTHR10264:SF80 1 288 2.9E-82 T 23-04-2016 RBRH_RS05835 36d05dc04ed6ae264e21baed48fe42d7 305 PANTHER PTHR10264 1 288 2.9E-82 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RBRH_RS05835 36d05dc04ed6ae264e21baed48fe42d7 305 TIGRFAM TIGR01932 hflC: HflC protein 141 284 2.1E-47 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RBRH_RS05835 36d05dc04ed6ae264e21baed48fe42d7 305 Pfam PF01145 SPFH domain / Band 7 family 24 200 9.8E-26 T 23-04-2016 IPR001107 Band 7 domain RBRH_RS06720 77fe8bc2519cc561c5f116e1239cc18c 139 PANTHER PTHR11527 1 139 9.5E-22 T 23-04-2016 IPR031107 Small heat shock protein HSP20 RBRH_RS06720 77fe8bc2519cc561c5f116e1239cc18c 139 SUPERFAMILY SSF49764 22 138 7.33E-27 T 23-04-2016 IPR008978 HSP20-like chaperone RBRH_RS06720 77fe8bc2519cc561c5f116e1239cc18c 139 Pfam PF00011 Hsp20/alpha crystallin family 38 137 6.1E-17 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RBRH_RS06720 77fe8bc2519cc561c5f116e1239cc18c 139 Gene3D G3DSA:2.60.40.790 17 138 1.4E-24 T 23-04-2016 IPR008978 HSP20-like chaperone RBRH_RS06720 77fe8bc2519cc561c5f116e1239cc18c 139 PANTHER PTHR11527:SF118 1 139 9.5E-22 T 23-04-2016 RBRH_RS01780 d34b96111830841f4d14d6897e7eec38 299 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 19 294 1.1E-96 T 23-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 RBRH_RS01780 d34b96111830841f4d14d6897e7eec38 299 PANTHER PTHR11048:SF7 20 296 1.3E-75 T 23-04-2016 RBRH_RS01780 d34b96111830841f4d14d6897e7eec38 299 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 12 295 27.988 T 23-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 RBRH_RS01780 d34b96111830841f4d14d6897e7eec38 299 PANTHER PTHR11048 20 296 1.3E-75 T 23-04-2016 RBRH_RS01780 d34b96111830841f4d14d6897e7eec38 299 Pfam PF01040 UbiA prenyltransferase family 35 277 1.7E-61 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RBRH_RS01780 d34b96111830841f4d14d6897e7eec38 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site RBRH_RS08205 51e467a17325b264446dd99539d7cfb7 561 Gene3D G3DSA:3.40.50.880 291 546 4.4E-94 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS08205 51e467a17325b264446dd99539d7cfb7 561 SUPERFAMILY SSF52540 2 270 4.61E-120 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08205 51e467a17325b264446dd99539d7cfb7 561 Gene3D G3DSA:3.40.50.300 1 288 9.8E-134 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08205 51e467a17325b264446dd99539d7cfb7 561 Pfam PF00117 Glutamine amidotransferase class-I 305 539 9.3E-56 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RBRH_RS08205 51e467a17325b264446dd99539d7cfb7 561 PANTHER PTHR11550 1 542 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RBRH_RS08205 51e467a17325b264446dd99539d7cfb7 561 SUPERFAMILY SSF52317 292 547 2.01E-81 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS08205 51e467a17325b264446dd99539d7cfb7 561 Hamap MF_01227 CTP synthase [pyrG]. 2 545 50.535 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RBRH_RS08205 51e467a17325b264446dd99539d7cfb7 561 TIGRFAM TIGR00337 PyrG: CTP synthase 2 540 2.1E-238 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RBRH_RS08205 51e467a17325b264446dd99539d7cfb7 561 Pfam PF06418 CTP synthase N-terminus 3 270 2.1E-126 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF00550 Phosphopantetheine attachment site 2041 2103 8.1E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF00550 Phosphopantetheine attachment site 968 1030 5.3E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF13745 HxxPF-repeated domain 1372 1461 9.8E-30 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF13745 HxxPF-repeated domain 2445 2534 7.5E-31 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1537 1955 7.2E-140 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 480 882 5.5E-138 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:3.30.300.30 853 968 4.2E-43 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:3.30.300.30 1926 2041 1.8E-45 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF52777 192 441 1.22E-33 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2731 2742 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 ProSitePatterns PS00455 Putative AMP-binding domain signature. 601 612 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1658 1669 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF13193 AMP-binding enzyme C-terminal domain 866 939 4.0E-10 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF13193 AMP-binding enzyme C-terminal domain 1939 2012 1.2E-11 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF52777 2310 2576 7.34E-67 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:3.40.50.980 1509 1663 1.4E-57 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF56801 2546 2822 1.03E-69 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 PANTHER PTHR24095 1715 2807 0.0 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 PANTHER PTHR24095 631 1695 0.0 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SMART SM00823 Phosphopantetheine attachment site 2039 2107 8.2E-4 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SMART SM00823 Phosphopantetheine attachment site 966 1034 0.0017 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF47336 2031 2103 2.36E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 PANTHER PTHR24095:SF137 1715 2807 0.0 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 PANTHER PTHR24095:SF137 631 1695 0.0 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF52777 12 185 8.12E-36 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF52777 1237 1502 6.0E-65 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF00501 AMP-binding enzyme 2589 2821 1.2E-54 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF00501 AMP-binding enzyme 1516 1931 5.8E-107 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF00501 AMP-binding enzyme 459 858 8.9E-102 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF52777 2128 2304 8.89E-49 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:3.40.50.980 1664 1841 2.5E-43 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:3.40.50.980 2741 2814 2.6E-18 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:3.40.50.980 611 768 1.0E-34 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:3.40.50.980 452 610 1.9E-53 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:3.40.50.980 2581 2740 5.3E-53 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:1.10.1200.10 2042 2108 4.9E-28 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:1.10.1200.10 969 1035 2.7E-28 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF00668 Condensation domain 9 295 2.6E-42 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF00668 Condensation domain 1050 1350 1.8E-73 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Pfam PF00668 Condensation domain 2123 2423 3.3E-76 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF47336 958 1030 1.7E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:2.30.38.10 1842 1921 1.6E-30 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 Gene3D G3DSA:2.30.38.10 769 848 8.3E-31 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF56801 419 979 7.2E-163 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF56801 1474 2052 6.8E-173 T 23-04-2016 RBRH_RS08105 d156ad0a997844d6bcc4adc67092d7d9 2865 SUPERFAMILY SSF52777 1055 1231 1.07E-47 T 23-04-2016 RBRH_RS07760 424ba09c03109e943fca359f2b308a7e 395 Pfam PF00534 Glycosyl transferases group 1 214 354 8.6E-16 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RBRH_RS07760 424ba09c03109e943fca359f2b308a7e 395 SUPERFAMILY SSF53756 156 376 1.53E-41 T 23-04-2016 RBRH_RS07760 424ba09c03109e943fca359f2b308a7e 395 SUPERFAMILY SSF53756 3 125 1.53E-41 T 23-04-2016 RBRH_RS07760 424ba09c03109e943fca359f2b308a7e 395 Pfam PF13439 Glycosyltransferase Family 4 47 203 1.4E-6 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RBRH_RS07760 424ba09c03109e943fca359f2b308a7e 395 Gene3D G3DSA:3.40.50.2000 213 354 3.0E-15 T 23-04-2016 RBRH_RS07760 424ba09c03109e943fca359f2b308a7e 395 PANTHER PTHR12526 162 385 2.9E-22 T 23-04-2016 RBRH_RS07760 424ba09c03109e943fca359f2b308a7e 395 PANTHER PTHR12526 1 122 2.9E-22 T 23-04-2016 RBRH_RS03800 c5c11a0f6a87c1f3002ec33529e2da4e 322 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 311 1.7E-94 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 RBRH_RS03800 c5c11a0f6a87c1f3002ec33529e2da4e 322 Pfam PF01636 Phosphotransferase enzyme family 28 261 4.0E-33 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase RBRH_RS03800 c5c11a0f6a87c1f3002ec33529e2da4e 322 Gene3D G3DSA:3.30.200.20 1 103 5.5E-40 T 23-04-2016 RBRH_RS03800 c5c11a0f6a87c1f3002ec33529e2da4e 322 PANTHER PTHR21064 8 294 1.7E-37 T 23-04-2016 RBRH_RS03800 c5c11a0f6a87c1f3002ec33529e2da4e 322 Gene3D G3DSA:3.90.1200.10 109 314 8.8E-62 T 23-04-2016 RBRH_RS03800 c5c11a0f6a87c1f3002ec33529e2da4e 322 SUPERFAMILY SSF56112 5 313 9.18E-70 T 23-04-2016 IPR011009 Protein kinase-like domain RBRH_RS03800 c5c11a0f6a87c1f3002ec33529e2da4e 322 Hamap MF_00301 Homoserine kinase [thrB]. 1 322 154.455 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 RBRH_RS01950 aa12e3cd8ea578e9075af83242b670f8 174 PANTHER PTHR33540 13 173 1.4E-37 T 23-04-2016 RBRH_RS01950 aa12e3cd8ea578e9075af83242b670f8 174 SUPERFAMILY SSF52540 46 152 5.35E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01950 aa12e3cd8ea578e9075af83242b670f8 174 Gene3D G3DSA:3.40.50.300 15 173 6.1E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01950 aa12e3cd8ea578e9075af83242b670f8 174 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 20 156 7.3E-37 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RBRH_RS01950 aa12e3cd8ea578e9075af83242b670f8 174 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 19 161 1.1E-36 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RBRH_RS00420 e3a44570cad42bf3ab6e024c016caa5e 400 Pfam PF00999 Sodium/hydrogen exchanger family 23 354 3.3E-31 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RBRH_RS00420 e3a44570cad42bf3ab6e024c016caa5e 400 PANTHER PTHR32507 1 399 1.6E-14 T 23-04-2016 RBRH_RS04145 c338aa2038d62b91f18ed14f4d28959f 368 Pfam PF00355 Rieske [2Fe-2S] domain 44 120 5.3E-11 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RBRH_RS04145 c338aa2038d62b91f18ed14f4d28959f 368 SUPERFAMILY SSF50022 15 142 3.54E-34 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RBRH_RS04145 c338aa2038d62b91f18ed14f4d28959f 368 SUPERFAMILY SSF55961 160 366 2.35E-41 T 23-04-2016 RBRH_RS04145 c338aa2038d62b91f18ed14f4d28959f 368 PANTHER PTHR21266:SF2 17 366 1.6E-43 T 23-04-2016 RBRH_RS04145 c338aa2038d62b91f18ed14f4d28959f 368 PANTHER PTHR21266 17 366 1.6E-43 T 23-04-2016 RBRH_RS04145 c338aa2038d62b91f18ed14f4d28959f 368 Gene3D G3DSA:3.90.380.10 138 362 5.7E-9 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RBRH_RS04145 c338aa2038d62b91f18ed14f4d28959f 368 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 166 363 7.6E-33 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RBRH_RS04145 c338aa2038d62b91f18ed14f4d28959f 368 Gene3D G3DSA:2.102.10.10 41 137 1.6E-25 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 Pfam PF13567 Domain of unknown function (DUF4131) 72 240 1.3E-17 T 23-04-2016 IPR025405 Domain of unknown function DUF4131 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 SMART SM00849 688 883 1.3E-7 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 SUPERFAMILY SSF56281 677 935 2.03E-41 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 Pfam PF03772 Competence protein 316 650 9.6E-53 T 23-04-2016 IPR004477 ComEC/Rec2-related protein RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 Pfam PF00753 Metallo-beta-lactamase superfamily 687 869 6.5E-7 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 338 467 2.7E-13 T 23-04-2016 IPR004477 ComEC/Rec2-related protein RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 PANTHER PTHR30619:SF2 48 246 1.6E-134 T 23-04-2016 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 PANTHER PTHR30619:SF2 270 295 1.6E-134 T 23-04-2016 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 PANTHER PTHR30619:SF2 527 937 1.6E-134 T 23-04-2016 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 PANTHER PTHR30619:SF2 311 468 1.6E-134 T 23-04-2016 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 540 912 1.0E-58 T 23-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 PANTHER PTHR30619 48 246 1.6E-134 T 23-04-2016 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 PANTHER PTHR30619 270 295 1.6E-134 T 23-04-2016 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 PANTHER PTHR30619 527 937 1.6E-134 T 23-04-2016 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 PANTHER PTHR30619 311 468 1.6E-134 T 23-04-2016 RBRH_RS08220 d9bdd5307ff1789797be679f3cc7d248 939 Gene3D G3DSA:3.60.15.10 679 907 1.3E-33 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 Gene3D G3DSA:1.10.8.10 5 78 5.6E-22 T 23-04-2016 RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 Pfam PF05175 Methyltransferase small domain 90 151 7.5E-8 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 SUPERFAMILY SSF53335 5 298 5.83E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 PANTHER PTHR18895:SF64 9 151 5.3E-85 T 23-04-2016 RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 PANTHER PTHR18895:SF64 176 301 5.3E-85 T 23-04-2016 RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 PANTHER PTHR18895 9 151 5.3E-85 T 23-04-2016 RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 PANTHER PTHR18895 176 301 5.3E-85 T 23-04-2016 RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 151 1.8E-37 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 301 40.901 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 17 297 1.2E-77 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RBRH_RS04970 fac80833d1e002419ec7c86312a130e7 301 Gene3D G3DSA:3.40.50.150 80 299 2.2E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF47336 3700 3775 2.75E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF53901 1506 1526 4.95E-67 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF53901 1116 1474 4.95E-67 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 50 451 8.2E-141 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 PANTHER PTHR11712 4784 5215 0.0 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF51735 6501 6724 9.51E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:1.10.1200.10 1720 1840 5.2E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:1.10.1200.10 3699 3796 1.4E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM01294 5238 5303 3.8E-5 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM01294 5150 5215 7.4E-5 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF47336 5238 5323 3.93E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.30.300.30 421 515 2.9E-31 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 507 9.4E-13 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF47336 532 601 2.62E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.50.720 3227 3245 2.5E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.50.720 3007 3190 2.5E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.50.720 4889 5077 1.4E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.50.720 6502 6706 1.3E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3977 3993 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF56801 7 521 4.06E-161 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF53901 1832 2209 4.71E-92 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3729 3744 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00826 4435 4596 1.7E-17 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00826 2472 2636 6.3E-15 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00826 5983 6144 1.8E-17 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF47336 5146 5231 7.2E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6504 6691 2.0E-29 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3008 3188 2.7E-33 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4890 5074 1.5E-45 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 5627 5743 1.2E-41 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4072 4191 1.7E-38 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1365 1481 9.6E-30 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2092 2216 4.8E-36 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF51735 6303 6488 1.89E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF55469 973 1077 4.89E-6 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF00501 AMP-binding enzyme 30 427 1.3E-108 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00823 Phosphopantetheine attachment site 5149 5219 1.1E-15 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00823 Phosphopantetheine attachment site 1724 1794 1.8E-10 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00823 Phosphopantetheine attachment site 5237 5307 2.3E-8 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00823 Phosphopantetheine attachment site 535 604 2.0E-4 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00823 Phosphopantetheine attachment site 3703 3773 1.4E-8 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.47.10 1121 1369 3.5E-74 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.47.10 3832 4076 3.9E-84 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.47.10 1371 1532 7.2E-38 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.47.10 4077 4254 7.4E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.47.10 2098 2276 5.9E-51 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.47.10 5632 5801 1.1E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF51735 4884 5131 1.11E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.50.980 178 337 1.2E-46 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 PANTHER PTHR11712 3320 3903 0.0 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 PANTHER PTHR11712 5381 5497 0.0 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 PANTHER PTHR11712 1689 2786 0.0 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF47336 1720 1848 3.4E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:2.30.38.10 338 416 2.4E-28 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF14765 Polyketide synthase dehydratase 4435 4711 1.1E-43 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF14765 Polyketide synthase dehydratase 2472 2760 2.2E-46 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF14765 Polyketide synthase dehydratase 5983 6268 5.4E-45 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 5747 5866 1.6E-12 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2220 2321 4.3E-10 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 4195 4318 2.3E-9 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF51735 2773 2982 9.4E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF08659 KR domain 4890 5072 2.3E-52 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF08659 KR domain 3008 3186 8.5E-44 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF08659 KR domain 6504 6689 1.5E-40 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 PANTHER PTHR11712:SF288 3320 3903 0.0 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 PANTHER PTHR11712:SF288 5381 5497 0.0 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF53901 5777 5794 1.15E-91 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF53901 5364 5736 1.15E-91 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.109.10 892 935 4.7E-4 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.109.10 974 1064 4.7E-4 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.50.150 3433 3631 4.5E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.50.980 22 177 1.7E-57 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5175 5190 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 PANTHER PTHR11712:SF288 1689 2786 0.0 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 PANTHER PTHR11712:SF288 4784 5215 0.0 T 23-04-2016 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF00550 Phosphopantetheine attachment site 537 600 1.3E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF00550 Phosphopantetheine attachment site 3705 3768 3.9E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF00550 Phosphopantetheine attachment site 5239 5303 2.3E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF00550 Phosphopantetheine attachment site 5152 5215 3.8E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF00550 Phosphopantetheine attachment site 1727 1789 9.0E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF51735 3007 3224 4.09E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF08242 Methyltransferase domain 3470 3573 3.2E-14 T 23-04-2016 IPR013217 Methyltransferase type 12 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.47.10 5365 5631 1.2E-87 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:3.40.47.10 1841 2096 2.2E-90 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3831 4064 2.2E-79 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1834 2084 8.4E-88 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1121 1357 4.2E-63 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5367 5619 1.8E-82 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:1.10.1200.10 5147 5220 1.5E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:1.10.1200.10 5236 5306 5.7E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00825 Beta-ketoacyl synthase 3832 4253 2.5E-180 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00825 Beta-ketoacyl synthase 1120 1531 3.0E-117 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00825 Beta-ketoacyl synthase 5369 5801 1.3E-198 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SMART SM00825 Beta-ketoacyl synthase 1836 2278 8.0E-187 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF53335 3386 3629 1.38E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 Gene3D G3DSA:1.10.1200.10 532 603 2.8E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF53901 4229 4249 5.14E-84 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07340 bece2711769e6e5e1f5b4c2c3953738c 6801 SUPERFAMILY SSF53901 3829 4184 5.14E-84 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS01345 6fa701e5495cfedbc56d07390b16fd55 290 Pfam PF05673 Protein of unknown function (DUF815) 33 285 1.4E-106 T 23-04-2016 IPR008533 Domain of unknown function DUF815 RBRH_RS01345 6fa701e5495cfedbc56d07390b16fd55 290 SMART SM00382 84 202 2.7E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS01345 6fa701e5495cfedbc56d07390b16fd55 290 Gene3D G3DSA:3.40.50.300 73 194 7.7E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01345 6fa701e5495cfedbc56d07390b16fd55 290 SUPERFAMILY SSF52540 44 193 7.57E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01345 6fa701e5495cfedbc56d07390b16fd55 290 PANTHER PTHR13779 4 188 3.4E-78 T 23-04-2016 RBRH_RS01345 6fa701e5495cfedbc56d07390b16fd55 290 PANTHER PTHR13779 216 285 3.4E-78 T 23-04-2016 RBRH_RS01345 6fa701e5495cfedbc56d07390b16fd55 290 PANTHER PTHR13779:SF28 4 188 3.4E-78 T 23-04-2016 RBRH_RS01345 6fa701e5495cfedbc56d07390b16fd55 290 PANTHER PTHR13779:SF28 216 285 3.4E-78 T 23-04-2016 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF53901 3543 3910 7.95E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF53901 3948 3969 7.95E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1450 1465 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF00550 Phosphopantetheine attachment site 1426 1491 6.6E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF00550 Phosphopantetheine attachment site 3393 3457 1.1E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF47336 3529 3557 1.44E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF51735 1143 1383 3.44E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF53901 58 413 3.9E-86 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF53901 449 459 3.9E-86 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 60 295 3.8E-72 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3545 3790 4.1E-61 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1560 1808 3.3E-86 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:3.40.47.10 1557 1820 1.5E-92 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF53335 3112 3303 4.42E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF08242 Methyltransferase domain 3142 3246 3.1E-13 T 23-04-2016 IPR013217 Methyltransferase type 12 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF53901 1558 1933 4.68E-87 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF53901 1975 1993 4.68E-87 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF14765 Polyketide synthase dehydratase 2187 2464 5.8E-54 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF14765 Polyketide synthase dehydratase 652 960 7.4E-55 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3917 4038 2.4E-10 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1944 2036 6.8E-13 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 424 528 7.0E-13 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF51735 969 1134 1.34E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF47336 3391 3462 1.44E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 PANTHER PTHR11712:SF284 4133 4154 4.4E-269 T 23-04-2016 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 PANTHER PTHR11712:SF284 994 2494 4.4E-269 T 23-04-2016 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF08659 KR domain 2693 2879 9.7E-38 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF08659 KR domain 1148 1330 6.9E-53 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 PANTHER PTHR11712 4133 4154 4.4E-269 T 23-04-2016 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 PANTHER PTHR11712 994 2494 4.4E-269 T 23-04-2016 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SMART SM01294 3392 3457 0.0032 T 23-04-2016 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:3.40.50.150 3105 3302 4.4E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:3.40.47.10 309 474 2.2E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:3.40.47.10 1822 1999 8.1E-56 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:3.40.47.10 3805 3971 2.7E-47 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1721 1737 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 208 224 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3705 3721 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SMART SM00826 2187 2350 7.6E-16 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SMART SM00826 652 824 1.7E-22 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SMART SM00825 Beta-ketoacyl synthase 61 474 5.7E-164 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SMART SM00825 Beta-ketoacyl synthase 1562 1999 3.3E-194 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SMART SM00825 Beta-ketoacyl synthase 3547 3973 2.5E-137 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:3.40.50.720 1147 1334 7.3E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:3.40.50.720 2691 2914 6.9E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF47336 1544 1574 1.83E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF47336 1421 1496 1.83E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:3.40.47.10 3553 3803 1.7E-67 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:3.40.47.10 61 307 5.3E-78 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 303 420 6.7E-38 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3799 3914 2.7E-34 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1816 1940 5.1E-39 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SMART SM00823 Phosphopantetheine attachment site 1424 1495 1.5E-12 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SMART SM00823 Phosphopantetheine attachment site 3391 3461 2.5E-8 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:1.10.1200.10 1421 1512 6.7E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:1.10.1200.10 3391 3478 5.7E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 Gene3D G3DSA:1.10.1200.10 3543 3552 5.7E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 3710 3728 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF51735 2690 2928 1.66E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2693 2881 9.9E-31 T 23-04-2016 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1148 1331 2.8E-55 T 23-04-2016 RBRH_RS07330 8842a5d0a5b5922ca81fa3e0c8899c26 4159 SUPERFAMILY SSF51735 2485 2677 1.65E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS00720 ca24777109fcc9c7b20211aa825ca2d6 390 PANTHER PTHR35861:SF1 1 389 1.3E-122 T 23-04-2016 RBRH_RS00720 ca24777109fcc9c7b20211aa825ca2d6 390 Pfam PF04984 Phage tail sheath protein 95 377 2.4E-47 T 23-04-2016 IPR007067 Tail sheath protein RBRH_RS00720 ca24777109fcc9c7b20211aa825ca2d6 390 Pfam PF04984 Phage tail sheath protein 1 90 4.2E-13 T 23-04-2016 IPR007067 Tail sheath protein RBRH_RS00720 ca24777109fcc9c7b20211aa825ca2d6 390 PANTHER PTHR35861 1 389 1.3E-122 T 23-04-2016 RBRH_RS04010 dc11c841b258d4f50dd888606fdd78c4 399 Pfam PF04865 Baseplate J-like protein 78 191 2.1E-10 T 23-04-2016 IPR006949 Baseplate protein J-like RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 Gene3D G3DSA:1.10.760.10 40 152 5.4E-33 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 PANTHER PTHR33751 34 219 8.4E-50 T 23-04-2016 RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 SUPERFAMILY SSF46626 32 120 3.49E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 PIRSF PIRSF000005 1 219 4.1E-62 T 23-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 Gene3D G3DSA:1.10.760.10 153 218 4.3E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 151 215 4.0E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 PANTHER PTHR33751:SF3 34 219 8.4E-50 T 23-04-2016 RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 Pfam PF00034 Cytochrome c 40 120 1.5E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 SUPERFAMILY SSF46626 130 217 9.89E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 PRINTS PR00605 Class IC cytochrome C signature 47 58 4.4E-5 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RBRH_RS04555 d67d5d67b316df5991848690e89a3f52 219 PRINTS PR00605 Class IC cytochrome C signature 193 215 4.4E-5 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RBRH_RS08955 b7a524d71cf635ac640ffb173405c123 607 Gene3D G3DSA:1.20.1560.10 26 344 1.8E-60 T 23-04-2016 RBRH_RS08955 b7a524d71cf635ac640ffb173405c123 607 SUPERFAMILY SSF90123 26 344 2.62E-57 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS08955 b7a524d71cf635ac640ffb173405c123 607 PANTHER PTHR24221 14 607 2.6E-282 T 23-04-2016 RBRH_RS08955 b7a524d71cf635ac640ffb173405c123 607 SMART SM00382 390 578 3.0E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS08955 b7a524d71cf635ac640ffb173405c123 607 Gene3D G3DSA:3.40.50.300 365 598 5.0E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08955 b7a524d71cf635ac640ffb173405c123 607 Pfam PF00664 ABC transporter transmembrane region 38 316 1.5E-37 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS08955 b7a524d71cf635ac640ffb173405c123 607 Pfam PF00005 ABC transporter 381 532 5.8E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS08955 b7a524d71cf635ac640ffb173405c123 607 PANTHER PTHR24221:SF18 14 607 2.6E-282 T 23-04-2016 RBRH_RS08955 b7a524d71cf635ac640ffb173405c123 607 SUPERFAMILY SSF52540 358 602 1.54E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08955 b7a524d71cf635ac640ffb173405c123 607 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS00870 d357780dd29d29754ae58a445392741c 473 Pfam PF03060 Nitronate monooxygenase 66 425 9.3E-33 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RBRH_RS00870 d357780dd29d29754ae58a445392741c 473 SUPERFAMILY SSF51412 66 351 1.47E-34 T 23-04-2016 RBRH_RS00870 d357780dd29d29754ae58a445392741c 473 PANTHER PTHR32332 124 425 8.6E-80 T 23-04-2016 RBRH_RS00870 d357780dd29d29754ae58a445392741c 473 PANTHER PTHR32332 56 101 8.6E-80 T 23-04-2016 RBRH_RS00870 d357780dd29d29754ae58a445392741c 473 PANTHER PTHR32332:SF18 124 425 8.6E-80 T 23-04-2016 RBRH_RS00870 d357780dd29d29754ae58a445392741c 473 PANTHER PTHR32332:SF18 56 101 8.6E-80 T 23-04-2016 RBRH_RS00870 d357780dd29d29754ae58a445392741c 473 Gene3D G3DSA:3.20.20.70 65 354 5.1E-35 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS06040 f1f90d8947ebdb01b107d6c0a5a995da 316 PANTHER PTHR10859:SF49 2 312 2.2E-107 T 23-04-2016 RBRH_RS06040 f1f90d8947ebdb01b107d6c0a5a995da 316 Gene3D G3DSA:3.90.550.10 1 140 6.3E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS06040 f1f90d8947ebdb01b107d6c0a5a995da 316 SUPERFAMILY SSF53448 1 256 1.18E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS06040 f1f90d8947ebdb01b107d6c0a5a995da 316 Pfam PF00535 Glycosyl transferase family 2 7 167 1.6E-28 T 23-04-2016 IPR001173 Glycosyltransferase 2-like RBRH_RS06040 f1f90d8947ebdb01b107d6c0a5a995da 316 PANTHER PTHR10859 2 312 2.2E-107 T 23-04-2016 RBRH_RS12035 6a142c2949ce6e8f6d3b79a4a7a6d954 213 SUPERFAMILY SSF102114 46 139 1.22E-5 T 23-04-2016 RBRH_RS12035 6a142c2949ce6e8f6d3b79a4a7a6d954 213 PANTHER PTHR11228 1 176 2.7E-24 T 23-04-2016 RBRH_RS12035 6a142c2949ce6e8f6d3b79a4a7a6d954 213 PANTHER PTHR11228:SF6 1 176 2.7E-24 T 23-04-2016 RBRH_RS12035 6a142c2949ce6e8f6d3b79a4a7a6d954 213 Gene3D G3DSA:3.80.30.10 90 140 2.5E-7 T 23-04-2016 RBRH_RS12035 6a142c2949ce6e8f6d3b79a4a7a6d954 213 PIRSF PIRSF000370 1 213 3.1E-37 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RBRH_RS12035 6a142c2949ce6e8f6d3b79a4a7a6d954 213 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 213 34.495 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RBRH_RS12035 6a142c2949ce6e8f6d3b79a4a7a6d954 213 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 213 5.2E-108 T 23-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 SUPERFAMILY SSF56042 458 687 3.89E-48 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 SUPERFAMILY SSF55326 655 848 8.63E-64 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 7 1350 0.0 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 SUPERFAMILY SSF52317 1096 1350 4.58E-89 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 SMART SM01211 1099 1350 9.1E-144 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1351 20.878 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 SUPERFAMILY SSF56042 859 1092 1.5E-51 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1099 1350 3.9E-100 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 SUPERFAMILY SSF82697 4 163 6.8E-44 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 PANTHER PTHR10099:SF5 382 948 0.0 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 PANTHER PTHR10099:SF5 974 1351 0.0 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 PANTHER PTHR10099:SF5 3 364 0.0 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 SUPERFAMILY SSF109736 167 232 1.96E-21 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 SUPERFAMILY SSF55326 233 453 4.53E-56 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 Gene3D G3DSA:3.30.1330.10 677 842 2.9E-14 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 Gene3D G3DSA:3.30.1330.10 223 447 2.1E-39 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 Pfam PF02769 AIR synthase related protein, C-terminal domain 861 1025 1.1E-13 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 Pfam PF02769 AIR synthase related protein, C-terminal domain 458 616 6.9E-25 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 PANTHER PTHR10099 382 948 0.0 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 PANTHER PTHR10099 974 1351 0.0 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 PANTHER PTHR10099 3 364 0.0 T 23-04-2016 RBRH_RS07065 5f46c6592f5ea2c89b99226db94b7312 1351 Gene3D G3DSA:3.40.50.880 1099 1323 6.0E-12 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 SMART SM00448 10 121 5.2E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 Pfam PF00072 Response regulator receiver domain 12 121 2.1E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 4.3E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 PANTHER PTHR26402 10 203 6.2E-67 T 23-04-2016 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 SUPERFAMILY SSF52172 10 159 1.39E-37 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 SUPERFAMILY SSF46894 137 204 8.5E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 7.5E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 7.5E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 7.5E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 SMART SM00421 145 202 1.5E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 PANTHER PTHR26402:SF613 10 203 6.2E-67 T 23-04-2016 RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 Gene3D G3DSA:1.10.10.10 153 205 2.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS08360 5589b740cc89c22997e346737e85dc81 207 Gene3D G3DSA:3.40.50.2300 11 152 1.3E-38 T 23-04-2016 RBRH_RS03565 e44e38001041e136842556b6e205a902 280 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 20 279 7.7E-93 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RBRH_RS03565 e44e38001041e136842556b6e205a902 280 PANTHER PTHR11935 17 280 8.8E-79 T 23-04-2016 RBRH_RS03565 e44e38001041e136842556b6e205a902 280 PIRSF PIRSF005457 15 279 3.0E-94 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RBRH_RS03565 e44e38001041e136842556b6e205a902 280 Pfam PF00753 Metallo-beta-lactamase superfamily 29 187 4.7E-14 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS03565 e44e38001041e136842556b6e205a902 280 SMART SM00849 27 191 8.7E-26 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS03565 e44e38001041e136842556b6e205a902 280 SUPERFAMILY SSF56281 18 279 4.19E-64 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS03565 e44e38001041e136842556b6e205a902 280 Gene3D G3DSA:3.60.15.10 20 279 8.2E-81 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS03565 e44e38001041e136842556b6e205a902 280 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 192 279 4.3E-24 T 23-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RBRH_RS03565 e44e38001041e136842556b6e205a902 280 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 65 85 - T 23-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 RBRH_RS03565 e44e38001041e136842556b6e205a902 280 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 17 279 41.564 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RBRH_RS03565 e44e38001041e136842556b6e205a902 280 PANTHER PTHR11935:SF7 17 280 8.8E-79 T 23-04-2016 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Pfam PF13184 NusA-like KH domain 232 299 2.4E-25 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 SUPERFAMILY SSF47794 433 490 3.14E-14 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 SMART SM00316 136 202 6.9E-8 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 PANTHER PTHR22648 1 448 7.5E-163 T 23-04-2016 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 SUPERFAMILY SSF54814 202 280 3.6E-29 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Pfam PF00575 S1 RNA binding domain 139 198 1.3E-7 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 SUPERFAMILY SSF47794 358 418 1.88E-16 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 344 3.9E-123 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Gene3D G3DSA:3.30.1480.10 1 128 8.7E-44 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Gene3D G3DSA:2.40.50.140 139 200 2.2E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 SUPERFAMILY SSF54814 281 344 5.82E-15 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 29.335 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 PANTHER PTHR22648:SF0 1 448 7.5E-163 T 23-04-2016 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 SUPERFAMILY SSF50249 136 201 6.0E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Gene3D G3DSA:3.30.300.20 280 349 3.4E-28 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 SUPERFAMILY SSF69705 1 129 3.14E-39 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Pfam PF14520 Helix-hairpin-helix domain 432 487 9.3E-9 T 23-04-2016 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Gene3D G3DSA:3.30.300.20 201 279 2.0E-32 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Pfam PF08529 NusA N-terminal domain 4 127 9.8E-36 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 416 8.1E-20 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 5.0E-16 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Gene3D G3DSA:1.10.150.20 433 490 4.1E-21 T 23-04-2016 RBRH_RS06200 b08fc344c0b64ecf792a3d22c5cfe2ec 491 Gene3D G3DSA:1.10.150.20 358 422 1.1E-22 T 23-04-2016 RBRH_RS04825 686c0e3cb56c9fe9f88530e1c041c899 248 Gene3D G3DSA:3.40.1390.30 1 107 1.1E-36 T 23-04-2016 RBRH_RS04825 686c0e3cb56c9fe9f88530e1c041c899 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 235 4.2E-57 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RBRH_RS04825 686c0e3cb56c9fe9f88530e1c041c899 248 SUPERFAMILY SSF102705 1 247 1.96E-78 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RBRH_RS04825 686c0e3cb56c9fe9f88530e1c041c899 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 247 1.3E-56 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RBRH_RS04825 686c0e3cb56c9fe9f88530e1c041c899 248 PANTHER PTHR13799 1 244 2.5E-71 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RBRH_RS04825 686c0e3cb56c9fe9f88530e1c041c899 248 Gene3D G3DSA:3.40.1390.30 108 215 1.1E-28 T 23-04-2016 RBRH_RS09320 5302323a1519985a4e1443ca2cde247b 293 PANTHER PTHR22778:SF21 3 256 4.7E-65 T 23-04-2016 RBRH_RS09320 5302323a1519985a4e1443ca2cde247b 293 SMART SM00450 122 223 6.0E-11 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS09320 5302323a1519985a4e1443ca2cde247b 293 SUPERFAMILY SSF52821 103 238 4.94E-24 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS09320 5302323a1519985a4e1443ca2cde247b 293 PANTHER PTHR22778 3 256 4.7E-65 T 23-04-2016 RBRH_RS09320 5302323a1519985a4e1443ca2cde247b 293 Gene3D G3DSA:3.40.250.10 108 233 1.3E-26 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS09320 5302323a1519985a4e1443ca2cde247b 293 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 261 36.001 T 23-04-2016 IPR020936 Uncharacterised protein family UPF0176 RBRH_RS07175 4004bea481f5ea878a71390733a8ff97 273 Gene3D G3DSA:1.10.600.10 5 272 1.8E-44 T 23-04-2016 IPR008949 Isoprenoid synthase domain RBRH_RS07175 4004bea481f5ea878a71390733a8ff97 273 PANTHER PTHR31480 5 272 4.1E-29 T 23-04-2016 RBRH_RS07175 4004bea481f5ea878a71390733a8ff97 273 Pfam PF00494 Squalene/phytoene synthase 14 263 2.9E-45 T 23-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 RBRH_RS07175 4004bea481f5ea878a71390733a8ff97 273 SUPERFAMILY SSF48576 5 272 1.58E-52 T 23-04-2016 IPR008949 Isoprenoid synthase domain RBRH_RS11795 b03865703962e14b59c3abae6934ecb7 335 SMART SM00382 51 243 5.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS11795 b03865703962e14b59c3abae6934ecb7 335 PANTHER PTHR24220 19 334 2.9E-166 T 23-04-2016 RBRH_RS11795 b03865703962e14b59c3abae6934ecb7 335 PANTHER PTHR24220:SF493 19 334 2.9E-166 T 23-04-2016 RBRH_RS11795 b03865703962e14b59c3abae6934ecb7 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 310 3.9E-17 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RBRH_RS11795 b03865703962e14b59c3abae6934ecb7 335 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS11795 b03865703962e14b59c3abae6934ecb7 335 SUPERFAMILY SSF52540 19 265 1.85E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11795 b03865703962e14b59c3abae6934ecb7 335 Gene3D G3DSA:3.40.50.300 17 267 2.2E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11795 b03865703962e14b59c3abae6934ecb7 335 Pfam PF00005 ABC transporter 42 193 1.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS11795 b03865703962e14b59c3abae6934ecb7 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 328 1.2E-25 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RBRH_RS04725 752fcb16c8ac9d855c0e0706e11b4d1b 91 Gene3D G3DSA:3.30.750.24 2 85 6.2E-8 T 23-04-2016 IPR002645 STAS domain RBRH_RS04725 752fcb16c8ac9d855c0e0706e11b4d1b 91 SUPERFAMILY SSF52091 4 85 6.28E-9 T 23-04-2016 IPR002645 STAS domain RBRH_RS04725 752fcb16c8ac9d855c0e0706e11b4d1b 91 Pfam PF13466 STAS domain 9 83 1.1E-14 T 23-04-2016 IPR002645 STAS domain RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 286 434 2.3E-40 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 Gene3D G3DSA:1.20.810.10 362 450 1.6E-156 T 23-04-2016 IPR027387 Cytochrome b/b6-like domain RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 Gene3D G3DSA:1.20.810.10 15 315 1.6E-156 T 23-04-2016 IPR027387 Cytochrome b/b6-like domain RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 PANTHER PTHR19271:SF9 11 314 3.5E-216 T 23-04-2016 RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 PANTHER PTHR19271:SF9 361 446 3.5E-216 T 23-04-2016 RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 Pfam PF00033 Cytochrome b/b6/petB 32 220 4.1E-67 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 PIRSF PIRSF038885 6 459 2.4E-151 T 23-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 PANTHER PTHR19271 11 314 3.5E-216 T 23-04-2016 RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 PANTHER PTHR19271 361 446 3.5E-216 T 23-04-2016 RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 SUPERFAMILY SSF81342 16 285 3.14E-96 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 SUPERFAMILY SSF81648 289 313 5.07E-23 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RBRH_RS04840 32d732afc479d5e7835f6e8b74956978 461 SUPERFAMILY SSF81648 360 445 5.07E-23 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RBRH_RS11115 eee98968d31f7f9ef6071b42d324cdfe 68 Gene3D G3DSA:1.20.1050.10 5 67 5.7E-24 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RBRH_RS11115 eee98968d31f7f9ef6071b42d324cdfe 68 PANTHER PTHR11260 6 67 1.6E-14 T 23-04-2016 RBRH_RS11115 eee98968d31f7f9ef6071b42d324cdfe 68 PANTHER PTHR11260:SF289 6 67 1.6E-14 T 23-04-2016 RBRH_RS11115 eee98968d31f7f9ef6071b42d324cdfe 68 SUPERFAMILY SSF47616 8 66 7.24E-15 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RBRH_RS00335 a236528a2d089ba3bf34460e4092db3b 550 PANTHER PTHR30203 43 544 7.8E-124 T 23-04-2016 RBRH_RS00335 a236528a2d089ba3bf34460e4092db3b 550 Gene3D G3DSA:1.20.1600.10 88 527 1.2E-109 T 23-04-2016 RBRH_RS00335 a236528a2d089ba3bf34460e4092db3b 550 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 65 525 1.7E-129 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RBRH_RS00335 a236528a2d089ba3bf34460e4092db3b 550 Pfam PF02321 Outer membrane efflux protein 341 523 3.0E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RBRH_RS00335 a236528a2d089ba3bf34460e4092db3b 550 Pfam PF02321 Outer membrane efflux protein 120 315 3.9E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RBRH_RS00335 a236528a2d089ba3bf34460e4092db3b 550 PANTHER PTHR30203:SF7 43 544 7.8E-124 T 23-04-2016 RBRH_RS00335 a236528a2d089ba3bf34460e4092db3b 550 SUPERFAMILY SSF56954 59 87 7.98E-106 T 23-04-2016 RBRH_RS00335 a236528a2d089ba3bf34460e4092db3b 550 SUPERFAMILY SSF56954 111 527 7.98E-106 T 23-04-2016 RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 SUPERFAMILY SSF54909 66 154 4.96E-20 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 SMART SM00344 6 115 5.7E-42 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 9.1E-18 T 23-04-2016 RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 Gene3D G3DSA:3.30.70.920 59 155 2.3E-25 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 7.1E-15 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 7.1E-15 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 7.1E-15 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 PANTHER PTHR30154 1 156 2.6E-60 T 23-04-2016 RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 SUPERFAMILY SSF46785 2 96 1.75E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 Gene3D G3DSA:1.10.10.10 3 57 1.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 3.7E-22 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RBRH_RS03675 e19bf7518f9c030be1c9161657ac81ac 162 PANTHER PTHR30154:SF28 1 156 2.6E-60 T 23-04-2016 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 SUPERFAMILY SSF53738 153 254 5.49E-34 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 PANTHER PTHR22573:SF28 1 459 1.9E-184 T 23-04-2016 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 155 252 1.7E-28 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 391 448 1.1E-9 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 364 4.1E-22 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 Gene3D G3DSA:3.30.310.50 368 458 2.4E-25 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 SUPERFAMILY SSF53738 257 353 9.03E-33 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 Gene3D G3DSA:3.40.120.10 5 146 1.1E-34 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 138 1.7E-34 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 PANTHER PTHR22573 1 459 1.9E-184 T 23-04-2016 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 SUPERFAMILY SSF53738 3 144 3.69E-38 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 98 112 3.7E-24 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 203 216 3.7E-24 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 3.7E-24 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 169 188 3.7E-24 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 Gene3D G3DSA:3.40.120.10 171 248 1.5E-33 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 Gene3D G3DSA:3.40.120.10 250 365 1.9E-44 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS09835 4df03d3ac347362bdcae27c4981e9fe4 460 SUPERFAMILY SSF55957 365 459 1.17E-19 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS02955 8c353bbdedf0fecd974a548de90702d1 306 PANTHER PTHR21363 1 294 2.3E-60 T 23-04-2016 RBRH_RS02955 8c353bbdedf0fecd974a548de90702d1 306 PANTHER PTHR21363:SF0 1 294 2.3E-60 T 23-04-2016 RBRH_RS02955 8c353bbdedf0fecd974a548de90702d1 306 Gene3D G3DSA:3.40.50.720 6 191 3.2E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS02955 8c353bbdedf0fecd974a548de90702d1 306 SUPERFAMILY SSF51735 8 181 2.45E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS02955 8c353bbdedf0fecd974a548de90702d1 306 Pfam PF02153 Prephenate dehydrogenase 21 283 5.0E-64 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 RBRH_RS02955 8c353bbdedf0fecd974a548de90702d1 306 SUPERFAMILY SSF48179 186 292 2.61E-32 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RBRH_RS02230 6ff3a900cbf58c2df18ee416158068b1 104 SUPERFAMILY SSF54736 19 103 2.46E-33 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RBRH_RS02230 6ff3a900cbf58c2df18ee416158068b1 104 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 3 99 28.576 T 23-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RBRH_RS02230 6ff3a900cbf58c2df18ee416158068b1 104 Gene3D G3DSA:3.30.1390.10 6 104 2.1E-43 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RBRH_RS02230 6ff3a900cbf58c2df18ee416158068b1 104 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 21 99 3.8E-35 T 23-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 RBRH_RS02230 6ff3a900cbf58c2df18ee416158068b1 104 PANTHER PTHR33473 14 102 2.5E-36 T 23-04-2016 RBRH_RS08760 5e47cde7e6b460ccc9c624cb1955e1b7 267 PANTHER PTHR10314 1 51 3.4E-20 T 23-04-2016 RBRH_RS08760 5e47cde7e6b460ccc9c624cb1955e1b7 267 PANTHER PTHR10314 74 237 3.4E-20 T 23-04-2016 RBRH_RS08760 5e47cde7e6b460ccc9c624cb1955e1b7 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RBRH_RS08760 5e47cde7e6b460ccc9c624cb1955e1b7 267 Gene3D G3DSA:3.20.20.70 2 265 1.2E-96 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS08760 5e47cde7e6b460ccc9c624cb1955e1b7 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 13 262 33.966 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RBRH_RS08760 5e47cde7e6b460ccc9c624cb1955e1b7 267 SUPERFAMILY SSF51366 1 255 6.69E-88 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RBRH_RS08760 5e47cde7e6b460ccc9c624cb1955e1b7 267 PANTHER PTHR10314:SF4 1 51 3.4E-20 T 23-04-2016 RBRH_RS08760 5e47cde7e6b460ccc9c624cb1955e1b7 267 PANTHER PTHR10314:SF4 74 237 3.4E-20 T 23-04-2016 RBRH_RS08760 5e47cde7e6b460ccc9c624cb1955e1b7 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 257 6.3E-72 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RBRH_RS08760 5e47cde7e6b460ccc9c624cb1955e1b7 267 Pfam PF00290 Tryptophan synthase alpha chain 8 258 2.8E-84 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.21 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 PIRSF PIRSF006092 1 158 5.1E-53 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 SUPERFAMILY SSF54534 83 157 4.84E-24 T 23-04-2016 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 SUPERFAMILY SSF46557 3 77 1.29E-27 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 Gene3D G3DSA:1.10.287.180 1 75 1.7E-34 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 5.0E-29 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.2E-31 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 Gene3D G3DSA:3.10.50.30 82 157 2.1E-31 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.4E-57 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RBRH_RS03595 392e33ed3ff043770fef77f01264c1d2 158 PANTHER PTHR30437 1 158 4.1E-66 T 23-04-2016 RBRH_RS10170 21d9beff69096dad9d4e6c740d85e411 347 PANTHER PTHR17490 13 345 4.3E-83 T 23-04-2016 RBRH_RS10170 21d9beff69096dad9d4e6c740d85e411 347 Pfam PF01300 Telomere recombination 24 204 1.4E-51 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 RBRH_RS10170 21d9beff69096dad9d4e6c740d85e411 347 Gene3D G3DSA:3.90.870.10 14 211 2.6E-73 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RBRH_RS10170 21d9beff69096dad9d4e6c740d85e411 347 PIRSF PIRSF004930 11 346 5.7E-100 T 23-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RBRH_RS10170 21d9beff69096dad9d4e6c740d85e411 347 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 16 215 7.4E-49 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 RBRH_RS10170 21d9beff69096dad9d4e6c740d85e411 347 SUPERFAMILY SSF55821 14 216 3.36E-59 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RBRH_RS10170 21d9beff69096dad9d4e6c740d85e411 347 Pfam PF03481 Putative GTP-binding controlling metal-binding 206 341 7.4E-21 T 23-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain RBRH_RS02930 cdd79e83affefc6ded7a83660b75f499 243 PRINTS PR01021 OMPA domain signature 150 166 3.8E-19 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RBRH_RS02930 cdd79e83affefc6ded7a83660b75f499 243 PRINTS PR01021 OMPA domain signature 135 150 3.8E-19 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RBRH_RS02930 cdd79e83affefc6ded7a83660b75f499 243 PRINTS PR01021 OMPA domain signature 105 127 3.8E-19 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RBRH_RS02930 cdd79e83affefc6ded7a83660b75f499 243 SUPERFAMILY SSF103088 93 212 3.14E-34 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS02930 cdd79e83affefc6ded7a83660b75f499 243 Gene3D G3DSA:3.30.1330.60 93 213 4.9E-38 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS02930 cdd79e83affefc6ded7a83660b75f499 243 PANTHER PTHR30128 85 235 6.4E-36 T 23-04-2016 RBRH_RS02930 cdd79e83affefc6ded7a83660b75f499 243 Pfam PF00691 OmpA family 104 196 3.4E-21 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS02255 d821874a6668bc5b145a37a5143f070e 168 Pfam PF01252 Signal peptidase (SPase) II 22 160 1.1E-38 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RBRH_RS02255 d821874a6668bc5b145a37a5143f070e 168 PANTHER PTHR33695:SF1 15 168 8.0E-51 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RBRH_RS02255 d821874a6668bc5b145a37a5143f070e 168 TIGRFAM TIGR00077 lspA: signal peptidase II 18 165 7.0E-42 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RBRH_RS02255 d821874a6668bc5b145a37a5143f070e 168 PANTHER PTHR33695 15 168 8.0E-51 T 23-04-2016 RBRH_RS02255 d821874a6668bc5b145a37a5143f070e 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RBRH_RS02255 d821874a6668bc5b145a37a5143f070e 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 2.0E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RBRH_RS02255 d821874a6668bc5b145a37a5143f070e 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 2.0E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RBRH_RS02255 d821874a6668bc5b145a37a5143f070e 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 59 67 2.0E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RBRH_RS02255 d821874a6668bc5b145a37a5143f070e 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 13 167 16.871 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RBRH_RS01820 9bcd638807482f6ca9cbdf8c77bb6218 357 PANTHER PTHR21225:SF7 5 356 2.2E-241 T 23-04-2016 RBRH_RS01820 9bcd638807482f6ca9cbdf8c77bb6218 357 Pfam PF00793 DAHP synthetase I family 43 339 4.0E-104 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RBRH_RS01820 9bcd638807482f6ca9cbdf8c77bb6218 357 PANTHER PTHR21225 5 356 2.2E-241 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RBRH_RS01820 9bcd638807482f6ca9cbdf8c77bb6218 357 SUPERFAMILY SSF51569 8 349 1.56E-136 T 23-04-2016 RBRH_RS01820 9bcd638807482f6ca9cbdf8c77bb6218 357 Gene3D G3DSA:3.20.20.70 10 351 9.3E-156 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS01820 9bcd638807482f6ca9cbdf8c77bb6218 357 PIRSF PIRSF001361 1 353 3.2E-160 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RBRH_RS01820 9bcd638807482f6ca9cbdf8c77bb6218 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 350 7.0E-165 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RBRH_RS01175 2faad619fd798c8502195dc77c6c32ee 266 PANTHER PTHR30458 8 266 1.4E-87 T 23-04-2016 RBRH_RS01175 2faad619fd798c8502195dc77c6c32ee 266 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 13 266 4.6E-84 T 23-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 RBRH_RS01175 2faad619fd798c8502195dc77c6c32ee 266 SUPERFAMILY SSF47240 5 260 6.73E-72 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS01175 2faad619fd798c8502195dc77c6c32ee 266 Pfam PF05138 Phenylacetic acid catabolic protein 4 266 1.6E-90 T 23-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 RBRH_RS01175 2faad619fd798c8502195dc77c6c32ee 266 PANTHER PTHR30458:SF1 8 266 1.4E-87 T 23-04-2016 RBRH_RS01175 2faad619fd798c8502195dc77c6c32ee 266 PIRSF PIRSF037834 1 266 9.7E-98 T 23-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 RBRH_RS01175 2faad619fd798c8502195dc77c6c32ee 266 Gene3D G3DSA:1.20.1260.10 4 266 2.6E-92 T 23-04-2016 IPR012347 Ferritin-related RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SUPERFAMILY SSF53901 47 411 6.41E-90 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Gene3D G3DSA:3.40.47.10 1551 1801 3.6E-80 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Gene3D G3DSA:3.40.47.10 45 304 1.0E-92 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Gene3D G3DSA:3.40.50.1820 2549 2587 2.3E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Gene3D G3DSA:3.40.50.1820 2304 2443 2.3E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1433 1448 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1109 1297 3.9E-47 T 23-04-2016 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SUPERFAMILY SSF51735 1105 1308 5.16E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Gene3D G3DSA:3.40.47.10 305 469 3.3E-58 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Gene3D G3DSA:3.40.47.10 1803 1978 5.8E-47 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SUPERFAMILY SSF47336 1526 1555 2.62E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SUPERFAMILY SSF47336 1408 1478 2.62E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Gene3D G3DSA:3.40.50.720 1107 1300 1.7E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Gene3D G3DSA:1.10.1200.10 1540 1550 4.0E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Gene3D G3DSA:1.10.1200.10 1410 1494 4.0E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SUPERFAMILY SSF47336 2209 2277 1.2E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Gene3D G3DSA:1.10.1200.10 2209 2274 6.1E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 204 220 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1797 1912 3.4E-33 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 300 415 2.2E-37 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SMART SM01294 1408 1473 2.4E-4 T 23-04-2016 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF14765 Polyketide synthase dehydratase 632 919 3.0E-45 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 PANTHER PTHR11712 1996 2060 8.1E-201 T 23-04-2016 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 PANTHER PTHR11712 51 493 8.1E-201 T 23-04-2016 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SMART SM00825 Beta-ketoacyl synthase 1544 1976 6.8E-153 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SMART SM00825 Beta-ketoacyl synthase 51 469 3.2E-190 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1542 1789 1.8E-74 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 49 291 7.1E-85 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 PANTHER PTHR11712:SF285 1996 2060 8.1E-201 T 23-04-2016 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 PANTHER PTHR11712:SF285 51 493 8.1E-201 T 23-04-2016 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1919 2045 6.9E-11 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 419 529 4.7E-17 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SUPERFAMILY SSF53901 444 466 6.41E-90 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF08659 KR domain 1109 1295 2.3E-54 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SUPERFAMILY SSF53474 2301 2588 5.81E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF00550 Phosphopantetheine attachment site 1409 1472 4.1E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF00550 Phosphopantetheine attachment site 2209 2271 2.1E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SMART SM00823 Phosphopantetheine attachment site 2204 2275 0.0064 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SMART SM00823 Phosphopantetheine attachment site 1407 1477 1.9E-9 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SMART SM00826 632 792 4.3E-10 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 Pfam PF00975 Thioesterase domain 2313 2586 1.7E-41 T 23-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SUPERFAMILY SSF53901 1952 1972 5.13E-78 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07315 c9b0b035af9d43bbb9e615d21d88649b 2609 SUPERFAMILY SSF53901 1539 1907 5.13E-78 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS04815 0b8afe074ccb213f89ac709bfcc94a55 300 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 151 177 3.2E-47 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RBRH_RS04815 0b8afe074ccb213f89ac709bfcc94a55 300 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 56 83 3.2E-47 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RBRH_RS04815 0b8afe074ccb213f89ac709bfcc94a55 300 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 133 151 3.2E-47 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RBRH_RS04815 0b8afe074ccb213f89ac709bfcc94a55 300 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 203 231 3.2E-47 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RBRH_RS04815 0b8afe074ccb213f89ac709bfcc94a55 300 PANTHER PTHR30371 30 298 1.7E-101 T 23-04-2016 RBRH_RS04815 0b8afe074ccb213f89ac709bfcc94a55 300 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 58 275 1.8E-70 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RBRH_RS04815 0b8afe074ccb213f89ac709bfcc94a55 300 Pfam PF00902 Sec-independent protein translocase protein (TatC) 60 270 7.8E-66 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RBRH_RS04815 0b8afe074ccb213f89ac709bfcc94a55 300 PANTHER PTHR30371:SF0 30 298 1.7E-101 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RBRH_RS04815 0b8afe074ccb213f89ac709bfcc94a55 300 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 50 289 18.888 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 Pfam PF01134 Glucose inhibited division protein A 8 399 1.7E-165 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 Pfam PF13932 GidA associated domain 402 626 1.9E-72 T 23-04-2016 IPR026904 GidA associated domain 3 RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 SUPERFAMILY SSF51905 6 66 2.07E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 SUPERFAMILY SSF51905 97 262 2.07E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 634 42.374 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 631 8.0E-273 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 23-04-2016 IPR020595 MnmG-related, conserved site RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 SMART SM01228 556 627 2.0E-43 T 23-04-2016 RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 Gene3D G3DSA:3.50.50.60 6 233 8.2E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 23-04-2016 IPR020595 MnmG-related, conserved site RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 PANTHER PTHR11806 1 652 0.0 T 23-04-2016 RBRH_RS00485 b25d69b34f3204975ebf3a0316cfdfa5 669 PANTHER PTHR11806:SF0 1 652 0.0 T 23-04-2016 RBRH_RS03250 d68a80485b69ba19dde2de4257b13c9f 1100 Gene3D G3DSA:2.40.50.140 31 124 7.1E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS03250 d68a80485b69ba19dde2de4257b13c9f 1100 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 5.5E-158 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RBRH_RS03250 d68a80485b69ba19dde2de4257b13c9f 1100 SUPERFAMILY SSF50249 39 124 2.52E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS03250 d68a80485b69ba19dde2de4257b13c9f 1100 SMART SM00316 37 118 4.9E-10 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS03250 d68a80485b69ba19dde2de4257b13c9f 1100 Pfam PF10150 Ribonuclease E/G family 120 389 1.0E-92 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RBRH_RS03250 d68a80485b69ba19dde2de4257b13c9f 1100 Hamap MF_00970 Ribonuclease E [rne]. 1 1086 35.159 T 23-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 RBRH_RS03250 d68a80485b69ba19dde2de4257b13c9f 1100 PANTHER PTHR30001:SF1 1 849 2.1E-303 T 23-04-2016 RBRH_RS03250 d68a80485b69ba19dde2de4257b13c9f 1100 Pfam PF00575 S1 RNA binding domain 36 117 2.6E-11 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS03250 d68a80485b69ba19dde2de4257b13c9f 1100 PANTHER PTHR30001 1 849 2.1E-303 T 23-04-2016 RBRH_RS09720 1c5c83a8dc3baf8ec97d183e0513a9d2 383 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.272 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09720 1c5c83a8dc3baf8ec97d183e0513a9d2 383 SUPERFAMILY SSF142695 204 368 3.14E-44 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RBRH_RS09720 1c5c83a8dc3baf8ec97d183e0513a9d2 383 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 3.0E-81 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09720 1c5c83a8dc3baf8ec97d183e0513a9d2 383 Pfam PF00925 GTP cyclohydrolase II 207 363 8.4E-36 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RBRH_RS09720 1c5c83a8dc3baf8ec97d183e0513a9d2 383 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 6 199 1.1E-71 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09720 1c5c83a8dc3baf8ec97d183e0513a9d2 383 PANTHER PTHR21327 1 368 8.3E-139 T 23-04-2016 RBRH_RS09720 1c5c83a8dc3baf8ec97d183e0513a9d2 383 PANTHER PTHR21327:SF6 1 368 8.3E-139 T 23-04-2016 RBRH_RS09720 1c5c83a8dc3baf8ec97d183e0513a9d2 383 Gene3D G3DSA:3.90.870.10 2 211 7.3E-97 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RBRH_RS09720 1c5c83a8dc3baf8ec97d183e0513a9d2 383 SUPERFAMILY SSF55821 3 202 1.97E-84 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RBRH_RS09720 1c5c83a8dc3baf8ec97d183e0513a9d2 383 PIRSF PIRSF001259 1 372 2.9E-114 T 23-04-2016 RBRH_RS09630 d9d57add04728dd91e8c1e56d3b97a4f 448 SUPERFAMILY SSF52540 27 267 3.08E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09630 d9d57add04728dd91e8c1e56d3b97a4f 448 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS09630 d9d57add04728dd91e8c1e56d3b97a4f 448 SMART SM00382 55 237 1.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS09630 d9d57add04728dd91e8c1e56d3b97a4f 448 PANTHER PTHR24220 28 306 5.8E-130 T 23-04-2016 RBRH_RS09630 d9d57add04728dd91e8c1e56d3b97a4f 448 PANTHER PTHR24220 327 436 5.8E-130 T 23-04-2016 RBRH_RS09630 d9d57add04728dd91e8c1e56d3b97a4f 448 Pfam PF00005 ABC transporter 46 185 4.2E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS09630 d9d57add04728dd91e8c1e56d3b97a4f 448 Gene3D G3DSA:3.40.50.300 19 244 1.1E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09630 d9d57add04728dd91e8c1e56d3b97a4f 448 Pfam PF09821 C-terminal AAA-associated domain 317 435 8.2E-42 T 23-04-2016 IPR018632 C-terminal AAA-associated domain RBRH_RS09630 d9d57add04728dd91e8c1e56d3b97a4f 448 PANTHER PTHR24220:SF589 28 306 5.8E-130 T 23-04-2016 RBRH_RS09630 d9d57add04728dd91e8c1e56d3b97a4f 448 PANTHER PTHR24220:SF589 327 436 5.8E-130 T 23-04-2016 RBRH_RS11555 728af122b0dbbbf90f3ef346445e132d 1209 SUPERFAMILY SSF52518 443 630 2.21E-12 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS11555 728af122b0dbbbf90f3ef346445e132d 1209 Gene3D G3DSA:3.40.920.10 733 927 1.2E-14 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RBRH_RS11555 728af122b0dbbbf90f3ef346445e132d 1209 SUPERFAMILY SSF53323 733 941 2.48E-24 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RBRH_RS11555 728af122b0dbbbf90f3ef346445e132d 1209 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 741 927 1.1E-16 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RBRH_RS11555 728af122b0dbbbf90f3ef346445e132d 1209 SUPERFAMILY SSF52518 29 246 7.65E-16 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS11555 728af122b0dbbbf90f3ef346445e132d 1209 PANTHER PTHR18968:SF134 256 769 3.3E-169 T 23-04-2016 RBRH_RS11555 728af122b0dbbbf90f3ef346445e132d 1209 Gene3D G3DSA:3.40.50.970 496 676 1.2E-8 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS11555 728af122b0dbbbf90f3ef346445e132d 1209 SUPERFAMILY SSF52922 277 406 5.89E-5 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RBRH_RS11555 728af122b0dbbbf90f3ef346445e132d 1209 PANTHER PTHR18968 256 769 3.3E-169 T 23-04-2016 RBRH_RS09995 4d4ac379edfb9f94da7b1ea424f7111e 192 Pfam PF02622 Uncharacterized ACR, COG1678 19 179 4.2E-50 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 RBRH_RS09995 4d4ac379edfb9f94da7b1ea424f7111e 192 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 8 192 38.107 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 RBRH_RS09995 4d4ac379edfb9f94da7b1ea424f7111e 192 Gene3D G3DSA:3.40.1740.10 136 182 2.2E-34 T 23-04-2016 RBRH_RS09995 4d4ac379edfb9f94da7b1ea424f7111e 192 Gene3D G3DSA:3.40.1740.10 5 47 2.2E-34 T 23-04-2016 RBRH_RS09995 4d4ac379edfb9f94da7b1ea424f7111e 192 SUPERFAMILY SSF143456 8 192 9.55E-64 T 23-04-2016 RBRH_RS09995 4d4ac379edfb9f94da7b1ea424f7111e 192 PANTHER PTHR30327:SF1 7 192 3.8E-60 T 23-04-2016 RBRH_RS09995 4d4ac379edfb9f94da7b1ea424f7111e 192 PANTHER PTHR30327 7 192 3.8E-60 T 23-04-2016 RBRH_RS09995 4d4ac379edfb9f94da7b1ea424f7111e 192 Gene3D G3DSA:3.30.70.1300 48 135 7.8E-30 T 23-04-2016 RBRH_RS11030 0afbe3efff15ccbe538be4cce278e742 322 SUPERFAMILY SSF75138 12 139 7.85E-30 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RBRH_RS11030 0afbe3efff15ccbe538be4cce278e742 322 SUPERFAMILY SSF53795 140 306 2.35E-35 T 23-04-2016 RBRH_RS11030 0afbe3efff15ccbe538be4cce278e742 322 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 12 308 1.4E-94 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RBRH_RS11030 0afbe3efff15ccbe538be4cce278e742 322 Gene3D G3DSA:3.40.1390.20 12 138 8.6E-35 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RBRH_RS11030 0afbe3efff15ccbe538be4cce278e742 322 Pfam PF02603 HPr Serine kinase N terminus 7 134 2.9E-23 T 23-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RBRH_RS11030 0afbe3efff15ccbe538be4cce278e742 322 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 313 36.055 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RBRH_RS11030 0afbe3efff15ccbe538be4cce278e742 322 PANTHER PTHR30305:SF1 1 317 1.2E-86 T 23-04-2016 RBRH_RS11030 0afbe3efff15ccbe538be4cce278e742 322 PANTHER PTHR30305 1 317 1.2E-86 T 23-04-2016 RBRH_RS11030 0afbe3efff15ccbe538be4cce278e742 322 Gene3D G3DSA:3.40.50.300 141 311 1.5E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11030 0afbe3efff15ccbe538be4cce278e742 322 Pfam PF07475 HPr Serine kinase C-terminal domain 139 306 1.7E-60 T 23-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RBRH_RS11295 3a295675eb92201abc228699132ae8ec 172 SUPERFAMILY SSF53062 1 124 5.36E-29 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RBRH_RS11295 3a295675eb92201abc228699132ae8ec 172 PANTHER PTHR33799 2 123 8.0E-19 T 23-04-2016 RBRH_RS11295 3a295675eb92201abc228699132ae8ec 172 Pfam PF03610 PTS system fructose IIA component 3 104 1.2E-17 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RBRH_RS11295 3a295675eb92201abc228699132ae8ec 172 Gene3D G3DSA:3.40.50.510 1 125 1.4E-35 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 Pfam PF01795 MraW methylase family 6 310 3.5E-102 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 37.716 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 PANTHER PTHR11265:SF0 7 313 6.0E-136 T 23-04-2016 RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 SUPERFAMILY SSF53335 216 311 2.74E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 SUPERFAMILY SSF53335 7 112 2.74E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 Gene3D G3DSA:1.10.150.170 112 218 8.7E-38 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 SUPERFAMILY SSF81799 113 216 6.02E-33 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 PANTHER PTHR11265 7 313 6.0E-136 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 310 5.5E-104 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 PIRSF PIRSF004486 1 312 9.8E-97 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 Gene3D G3DSA:3.40.50.150 219 311 4.2E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01250 fb791c81e845db222d4399c84ccf7ab1 313 Gene3D G3DSA:3.40.50.150 7 109 4.2E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01035 901aa51b1ed86d81b4b1086101f1b57b 205 PANTHER PTHR23133 8 189 2.2E-28 T 23-04-2016 RBRH_RS01035 901aa51b1ed86d81b4b1086101f1b57b 205 Gene3D G3DSA:3.40.50.1000 10 187 3.1E-49 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS01035 901aa51b1ed86d81b4b1086101f1b57b 205 PANTHER PTHR23133:SF3 8 189 2.2E-28 T 23-04-2016 RBRH_RS01035 901aa51b1ed86d81b4b1086101f1b57b 205 Pfam PF13242 HAD-hyrolase-like 112 182 4.5E-14 T 23-04-2016 RBRH_RS01035 901aa51b1ed86d81b4b1086101f1b57b 205 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 10 158 1.9E-26 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RBRH_RS01035 901aa51b1ed86d81b4b1086101f1b57b 205 SUPERFAMILY SSF56784 9 187 1.84E-45 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS01035 901aa51b1ed86d81b4b1086101f1b57b 205 PIRSF PIRSF004682 2 193 3.1E-54 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 RBRH_RS01035 901aa51b1ed86d81b4b1086101f1b57b 205 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 10 157 4.8E-33 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PANTHER PTHR19370:SF68 33 333 3.1E-70 T 23-04-2016 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 Gene3D G3DSA:3.40.50.80 201 335 8.1E-41 T 23-04-2016 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 7.2E-21 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 7.2E-21 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 7.2E-21 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 7.2E-21 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 7.2E-21 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 7.2E-21 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 7.7E-14 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 Pfam PF00970 Oxidoreductase FAD-binding domain 105 197 1.0E-19 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 SUPERFAMILY SSF52343 201 334 4.71E-40 T 23-04-2016 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 Gene3D G3DSA:3.10.20.30 2 101 5.2E-29 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 Pfam PF00175 Oxidoreductase NAD-binding domain 209 314 3.6E-20 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PANTHER PTHR19370 33 333 3.1E-70 T 23-04-2016 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 4.8E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 300 308 4.8E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 4.8E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 233 242 4.8E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 SUPERFAMILY SSF63380 102 199 9.14E-26 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 Gene3D G3DSA:2.40.30.10 102 199 2.1E-33 T 23-04-2016 RBRH_RS02360 054fa29cd8d3396e13f3fb8e7563c716 343 SUPERFAMILY SSF54292 1 89 4.72E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RBRH_RS08570 de219610ca1eefb6e428fea908f65303 320 SUPERFAMILY SSF74653 231 309 1.57E-14 T 23-04-2016 RBRH_RS08570 de219610ca1eefb6e428fea908f65303 320 TIGRFAM TIGR02794 tolA_full: protein TolA 19 304 1.0E-30 T 23-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 RBRH_RS08570 de219610ca1eefb6e428fea908f65303 320 Pfam PF13103 TonB C terminal 234 313 2.4E-17 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RBRH_RS08570 de219610ca1eefb6e428fea908f65303 320 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 262 315 1.2E-7 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RBRH_RS08570 de219610ca1eefb6e428fea908f65303 320 Gene3D G3DSA:3.30.1150.10 213 317 3.5E-23 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:2.30.38.10 5259 5336 6.4E-28 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:2.30.38.10 4210 4287 6.4E-28 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:2.30.38.10 2745 2822 5.0E-28 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:2.30.38.10 600 679 1.2E-29 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:2.30.38.10 1684 1761 7.0E-30 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 ProSitePatterns PS00012 Phosphopantetheine attachment site. 821 836 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1902 1917 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5479 5494 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4426 4441 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3377 3392 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1515 1526 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4039 4050 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 ProSitePatterns PS00455 Putative AMP-binding domain signature. 436 447 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 ProSitePatterns PS00455 Putative AMP-binding domain signature. 5088 5099 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2580 2591 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.150 2915 3056 6.7E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.30.300.30 4292 4405 1.5E-43 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.30.300.30 3296 3356 1.3E-40 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.30.300.30 1766 1882 3.1E-38 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.30.300.30 2827 2884 1.3E-40 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.30.300.30 5341 5459 4.1E-45 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.30.300.30 684 800 1.3E-41 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF53335 2916 3065 2.84E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SMART SM00823 Phosphopantetheine attachment site 1878 1947 1.9E-8 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SMART SM00823 Phosphopantetheine attachment site 797 865 4.4E-4 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SMART SM00823 Phosphopantetheine attachment site 3353 3422 3.2E-7 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SMART SM00823 Phosphopantetheine attachment site 5455 5517 5.0E-4 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SMART SM00823 Phosphopantetheine attachment site 4402 4471 7.7E-9 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF52777 909 1104 1.89E-30 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF47336 3345 3418 1.26E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:1.10.1200.10 5460 5518 1.1E-26 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:1.10.1200.10 1883 1944 7.6E-28 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:1.10.1200.10 3357 3423 1.6E-27 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:1.10.1200.10 801 865 1.3E-25 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:1.10.1200.10 4406 4472 7.6E-29 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.1820 5720 5787 1.3E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.1820 5530 5647 1.3E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF13193 AMP-binding enzyme C-terminal domain 5354 5430 5.3E-13 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF13193 AMP-binding enzyme C-terminal domain 1779 1854 9.8E-9 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF13193 AMP-binding enzyme C-terminal domain 697 770 8.6E-11 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF13193 AMP-binding enzyme C-terminal domain 4305 4378 1.1E-11 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF13193 AMP-binding enzyme C-terminal domain 2840 2878 3.1E-6 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00550 Phosphopantetheine attachment site 800 861 4.8E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00550 Phosphopantetheine attachment site 3355 3415 1.8E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00550 Phosphopantetheine attachment site 1881 1943 2.3E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00550 Phosphopantetheine attachment site 4404 4464 7.6E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00550 Phosphopantetheine attachment site 5457 5518 6.2E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3918 4321 1.7E-139 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1394 1793 1.3E-137 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 315 713 1.2E-137 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4967 5370 8.3E-139 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2452 2856 2.7E-140 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 PANTHER PTHR24095:SF173 1546 2034 0.0 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 PANTHER PTHR24095:SF173 3415 5430 0.0 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF13745 HxxPF-repeated domain 2282 2378 1.7E-29 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF13745 HxxPF-repeated domain 3753 3843 7.8E-27 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF13745 HxxPF-repeated domain 4802 4892 7.7E-30 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF56801 254 810 2.88E-169 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF47336 789 861 7.85E-18 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF52777 1964 2136 1.89E-47 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF47336 5449 5518 8.38E-20 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF56801 3855 4415 6.28E-165 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF47336 4394 4467 4.06E-21 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF52777 3436 3632 7.45E-50 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00668 Condensation domain 3440 3731 8.3E-77 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00668 Condensation domain 4489 4780 2.1E-76 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00668 Condensation domain 911 1204 2.1E-41 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00668 Condensation domain 1961 2259 7.9E-68 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF56801 3291 3366 8.11E-165 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF56801 2390 2886 8.11E-165 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00975 Thioesterase domain 5544 5779 2.5E-28 T 23-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF52777 3619 3884 7.89E-66 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF56801 1325 1891 1.28E-163 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF52777 2150 2419 3.22E-64 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00501 AMP-binding enzyme 4946 5346 6.1E-100 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00501 AMP-binding enzyme 3897 4297 6.1E-100 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00501 AMP-binding enzyme 1373 1771 7.8E-103 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00501 AMP-binding enzyme 294 689 1.1E-100 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF00501 AMP-binding enzyme 2431 2832 6.1E-105 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF52777 4668 4933 4.22E-66 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.980 287 445 2.2E-56 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.980 1366 1522 2.4E-56 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.980 2424 2589 2.3E-55 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Pfam PF08242 Methyltransferase domain 2950 3050 8.0E-12 T 23-04-2016 IPR013217 Methyltransferase type 12 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF52777 38 281 7.78E-15 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 PANTHER PTHR24095 1546 2034 0.0 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 PANTHER PTHR24095 3415 5430 0.0 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF52777 1092 1352 7.45E-44 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.980 446 599 2.3E-36 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.980 4046 4209 5.4E-40 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.980 5095 5258 5.4E-40 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.980 2590 2744 3.0E-37 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.980 1523 1683 3.6E-39 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF53474 5526 5787 1.36E-59 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.980 3891 4045 1.6E-55 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 Gene3D G3DSA:3.40.50.980 4940 5094 1.6E-55 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF56801 4904 5468 5.1E-167 T 23-04-2016 RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF47336 1872 1943 9.95E-22 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08650 6947a95f6cc32be1af17fcc99a0e4ba5 5791 SUPERFAMILY SSF52777 4487 4681 2.45E-50 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1382 1565 3.8E-14 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2977 3163 3.7E-50 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4289 4479 9.7E-11 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF08659 KR domain 2977 3162 1.1E-55 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF08659 KR domain 4289 4476 7.7E-27 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF08659 KR domain 1382 1563 1.3E-31 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 PANTHER PTHR11712:SF288 2949 3211 2.6E-232 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 PANTHER PTHR11712:SF288 4590 4926 2.6E-232 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 PANTHER PTHR11712:SF288 518 1146 2.6E-232 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF53901 518 873 4.4E-90 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF53901 908 929 4.4E-90 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF47336 389 464 7.33E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00823 Phosphopantetheine attachment site 4970 5041 5.4E-17 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00823 Phosphopantetheine attachment site 2052 2123 6.5E-11 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00823 Phosphopantetheine attachment site 391 461 9.1E-10 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00823 Phosphopantetheine attachment site 3259 3339 1.7E-7 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00823 Phosphopantetheine attachment site 5101 5172 1.3E-17 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF51735 4287 4485 1.11E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM01294 4971 5037 4.2E-8 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM01294 2053 2119 1.5E-7 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM01294 5102 5168 2.9E-17 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.47.10 2202 2442 4.6E-81 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF53335 4673 4908 4.62E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF00550 Phosphopantetheine attachment site 5104 5168 2.5E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF00550 Phosphopantetheine attachment site 2055 2119 2.8E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF00550 Phosphopantetheine attachment site 4977 5037 6.8E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF00550 Phosphopantetheine attachment site 3260 3335 1.1E-7 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF00550 Phosphopantetheine attachment site 392 456 8.9E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF47336 4966 5046 7.98E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF08242 Methyltransferase domain 4748 4852 4.0E-13 T 23-04-2016 IPR013217 Methyltransferase type 12 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF08242 Methyltransferase domain 168 272 1.8E-12 T 23-04-2016 IPR013217 Methyltransferase type 12 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF08242 Methyltransferase domain 1828 1932 5.0E-13 T 23-04-2016 IPR013217 Methyltransferase type 12 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2343 2359 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 667 683 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF53901 2193 2548 1.82E-85 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 762 880 3.6E-39 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2438 2555 4.4E-37 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3655 3772 9.2E-39 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 520 754 3.3E-81 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2196 2430 3.5E-76 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3394 3647 4.0E-82 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:1.10.1200.10 390 477 1.5E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:1.10.1200.10 2193 2201 8.4E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:1.10.1200.10 518 528 1.5E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:1.10.1200.10 2051 2140 8.4E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.50.720 4287 4507 2.9E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.50.720 2976 3166 7.2E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.50.720 1380 1567 1.0E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF53335 1743 1990 2.07E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF47336 2051 2124 2.75E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF47336 2179 2207 2.75E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF53335 99 327 8.99E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:1.10.1200.10 4977 5040 2.7E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:1.10.1200.10 5097 5172 4.3E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:1.10.1200.10 3258 3339 5.3E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.50.150 4711 4909 8.0E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.50.150 133 325 2.3E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.50.150 1791 1993 1.7E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.47.10 3661 3827 2.1E-55 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.47.10 767 931 5.0E-55 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.47.10 2444 2609 4.3E-50 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3778 3881 8.3E-9 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 884 995 6.3E-13 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2559 2678 4.6E-10 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 ProSitePatterns PS00012 Phosphopantetheine attachment site. 417 432 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF47336 5097 5178 4.19E-15 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00825 Beta-ketoacyl synthase 2197 2609 6.1E-162 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00825 Beta-ketoacyl synthase 522 933 1.9E-188 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SMART SM00825 Beta-ketoacyl synthase 3396 3826 3.5E-197 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF51735 2975 3187 2.56E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF51735 1381 1594 2.16E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.47.10 529 766 6.3E-86 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 Gene3D G3DSA:3.40.47.10 3396 3659 4.8E-89 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF53901 3801 3822 9.11E-95 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF53901 3392 3765 9.11E-95 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF47336 3378 3408 7.72E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 SUPERFAMILY SSF47336 3258 3340 7.72E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 PANTHER PTHR11712 2949 3211 2.6E-232 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 PANTHER PTHR11712 4590 4926 2.6E-232 T 23-04-2016 RBRH_RS07335 e186df3f77f5295f95548c41deb2d997 5235 PANTHER PTHR11712 518 1146 2.6E-232 T 23-04-2016 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.5E-45 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.5E-45 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.5E-45 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.5E-45 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.5E-45 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 SUPERFAMILY SSF52374 1 155 1.96E-43 T 23-04-2016 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 Pfam PF01467 Cytidylyltransferase-like 5 133 2.9E-18 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 7.1E-56 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 PANTHER PTHR21342:SF1 1 158 1.4E-71 T 23-04-2016 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 PANTHER PTHR21342 1 158 1.4E-71 T 23-04-2016 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 58 1.6E-16 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 34.595 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RBRH_RS11095 3c5f0409d467ee262093254a94b3055e 167 Gene3D G3DSA:3.40.50.620 2 157 1.5E-52 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02500 ceda23905f23e593b876ca49d336a56d 329 Pfam PF01032 FecCD transport family 19 325 6.3E-80 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RBRH_RS02500 ceda23905f23e593b876ca49d336a56d 329 Gene3D G3DSA:1.10.3470.10 2 328 3.7E-94 T 23-04-2016 IPR029022 ABC transporter, BtuC-like RBRH_RS02500 ceda23905f23e593b876ca49d336a56d 329 PANTHER PTHR30472:SF3 4 329 1.2E-83 T 23-04-2016 RBRH_RS02500 ceda23905f23e593b876ca49d336a56d 329 SUPERFAMILY SSF81345 4 325 6.41E-69 T 23-04-2016 IPR029022 ABC transporter, BtuC-like RBRH_RS02500 ceda23905f23e593b876ca49d336a56d 329 PANTHER PTHR30472 4 329 1.2E-83 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RBRH_RS01355 52e8470118d4b5784aafe74052475a34 66 SUPERFAMILY SSF57716 2 58 2.99E-20 T 23-04-2016 RBRH_RS01355 52e8470118d4b5784aafe74052475a34 66 PANTHER PTHR36150:SF1 1 58 2.4E-19 T 23-04-2016 RBRH_RS01355 52e8470118d4b5784aafe74052475a34 66 Gene3D G3DSA:3.30.50.10 2 57 9.3E-26 T 23-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 RBRH_RS01355 52e8470118d4b5784aafe74052475a34 66 PANTHER PTHR36150 1 58 2.4E-19 T 23-04-2016 RBRH_RS01355 52e8470118d4b5784aafe74052475a34 66 Pfam PF03884 Domain of unknown function (DUF329) 5 55 1.4E-25 T 23-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RBRH_RS01355 52e8470118d4b5784aafe74052475a34 66 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 55 18.705 T 23-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RBRH_RS03475 fc31cf344c767293d26258738ba2b9fa 354 PANTHER PTHR12526 1 345 2.0E-44 T 23-04-2016 RBRH_RS03475 fc31cf344c767293d26258738ba2b9fa 354 Pfam PF13439 Glycosyltransferase Family 4 18 119 1.9E-12 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RBRH_RS03475 fc31cf344c767293d26258738ba2b9fa 354 SUPERFAMILY SSF53756 11 342 7.46E-62 T 23-04-2016 RBRH_RS03475 fc31cf344c767293d26258738ba2b9fa 354 Pfam PF00534 Glycosyl transferases group 1 171 308 1.6E-25 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RBRH_RS03475 fc31cf344c767293d26258738ba2b9fa 354 Gene3D G3DSA:3.40.50.2000 172 308 3.1E-20 T 23-04-2016 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:1.20.1580.10 259 292 1.2E-50 T 23-04-2016 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:1.20.1580.10 91 129 1.2E-50 T 23-04-2016 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:1.20.1580.10 415 489 1.2E-50 T 23-04-2016 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 SUPERFAMILY SSF52540 633 923 6.41E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:1.20.1580.10 704 830 3.9E-53 T 23-04-2016 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:3.30.1490.20 130 153 1.5E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:3.30.1490.20 210 258 1.5E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 ProSitePatterns PS00211 ABC transporters family signature. 840 854 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 PANTHER PTHR32282:SF2 1 183 0.0 T 23-04-2016 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 PANTHER PTHR32282:SF2 200 956 0.0 T 23-04-2016 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:3.40.50.300 831 948 2.9E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:3.40.50.300 2 51 1.3E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:3.40.50.300 616 702 2.9E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:3.40.50.300 490 606 1.3E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 935 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Gene3D G3DSA:1.10.8.280 295 414 2.9E-41 T 23-04-2016 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 SUPERFAMILY SSF52540 1 204 2.09E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 SUPERFAMILY SSF52540 462 581 2.09E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 950 22.258 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 PANTHER PTHR32282 1 183 0.0 T 23-04-2016 RBRH_RS10955 e0c9e3447b9ceb8e66779b2287526717 957 PANTHER PTHR32282 200 956 0.0 T 23-04-2016 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 SUPERFAMILY SSF48256 9 433 4.19E-167 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 Gene3D G3DSA:1.10.230.10 285 378 1.9E-42 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 ProSitePatterns PS00480 Citrate synthase signature. 307 319 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 PIRSF PIRSF001369 41 433 1.4E-167 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 PANTHER PTHR11739:SF13 8 433 7.9E-204 T 23-04-2016 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 426 4.8E-241 T 23-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 Gene3D G3DSA:1.10.580.10 56 284 2.9E-98 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 PANTHER PTHR11739 8 433 7.9E-204 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 PRINTS PR00143 Citrate synthase signature 245 273 8.3E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 PRINTS PR00143 Citrate synthase signature 169 182 8.3E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 PRINTS PR00143 Citrate synthase signature 364 380 8.3E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 PRINTS PR00143 Citrate synthase signature 384 398 8.3E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 PRINTS PR00143 Citrate synthase signature 223 238 8.3E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 PRINTS PR00143 Citrate synthase signature 300 320 8.3E-55 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RBRH_RS08810 c8bb2f6508736c8c6e591f87ba187d92 433 Pfam PF00285 Citrate synthase, C-terminal domain 50 416 2.8E-134 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 RBRH_RS03305 cc5f1df8f27cc71a63362285d12a97fc 380 PANTHER PTHR30100 1 340 7.7E-135 T 23-04-2016 RBRH_RS03305 cc5f1df8f27cc71a63362285d12a97fc 380 PIRSF PIRSF002465 1 336 1.0E-127 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RBRH_RS03305 cc5f1df8f27cc71a63362285d12a97fc 380 PANTHER PTHR30100:SF1 1 340 7.7E-135 T 23-04-2016 RBRH_RS03305 cc5f1df8f27cc71a63362285d12a97fc 380 SUPERFAMILY SSF53659 3 332 4.93E-105 T 23-04-2016 RBRH_RS03305 cc5f1df8f27cc71a63362285d12a97fc 380 Gene3D G3DSA:3.40.718.10 2 332 4.6E-134 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RBRH_RS03305 cc5f1df8f27cc71a63362285d12a97fc 380 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 4 333 4.1E-110 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RBRH_RS03305 cc5f1df8f27cc71a63362285d12a97fc 380 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 338 152.873 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RBRH_RS03305 cc5f1df8f27cc71a63362285d12a97fc 380 Pfam PF02504 Fatty acid synthesis protein 3 325 2.3E-108 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 PANTHER PTHR23105 19 225 5.1E-74 T 23-04-2016 RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 3.6E-104 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 PIRSF PIRSF002155 1 227 3.1E-75 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 PANTHER PTHR23105:SF5 19 225 5.1E-74 T 23-04-2016 RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 Gene3D G3DSA:3.40.50.790 69 159 2.6E-41 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.095 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 SUPERFAMILY SSF56808 6 225 4.58E-80 T 23-04-2016 IPR023674 Ribosomal protein L1-like RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 Gene3D G3DSA:3.30.190.20 161 226 3.2E-45 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 Gene3D G3DSA:3.30.190.20 19 68 3.2E-45 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site RBRH_RS04330 f7b2837ceb1c3e7ea598af5ed99237f4 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 2.2E-51 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RBRH_RS06790 56c9333a6f32a01f3f641224bd949c47 256 SUPERFAMILY SSF52540 3 245 5.86E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06790 56c9333a6f32a01f3f641224bd949c47 256 SMART SM00382 28 222 4.7E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS06790 56c9333a6f32a01f3f641224bd949c47 256 Gene3D G3DSA:3.40.50.300 3 242 6.8E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06790 56c9333a6f32a01f3f641224bd949c47 256 PANTHER PTHR24220 5 246 2.6E-96 T 23-04-2016 RBRH_RS06790 56c9333a6f32a01f3f641224bd949c47 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 223 244 2.8E-9 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RBRH_RS06790 56c9333a6f32a01f3f641224bd949c47 256 PANTHER PTHR24220:SF358 5 246 2.6E-96 T 23-04-2016 RBRH_RS06790 56c9333a6f32a01f3f641224bd949c47 256 Pfam PF00005 ABC transporter 20 175 7.6E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS09675 e8a418bf29b01f88414efa46e95aa1f0 228 PANTHER PTHR11054 2 207 7.7E-30 T 23-04-2016 RBRH_RS09675 e8a418bf29b01f88414efa46e95aa1f0 228 SUPERFAMILY SSF100950 2 219 6.51E-44 T 23-04-2016 RBRH_RS09675 e8a418bf29b01f88414efa46e95aa1f0 228 Gene3D G3DSA:3.40.50.1360 3 208 4.5E-46 T 23-04-2016 RBRH_RS09675 e8a418bf29b01f88414efa46e95aa1f0 228 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 12 207 3.9E-47 T 23-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RBRH_RS09675 e8a418bf29b01f88414efa46e95aa1f0 228 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 13 207 7.0E-44 T 23-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Gene3D G3DSA:3.40.50.300 6 294 1.2E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PANTHER PTHR23115:SF66 309 700 0.0 T 23-04-2016 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Pfam PF03764 Elongation factor G, domain IV 485 604 4.2E-47 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 SMART SM00889 486 605 9.8E-72 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Pfam PF00679 Elongation factor G C-terminus 607 695 5.4E-32 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 SMART SM00838 607 696 1.9E-52 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 109.955 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PANTHER PTHR23115 6 184 0.0 T 23-04-2016 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 4.5E-31 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PANTHER PTHR23115:SF66 6 184 0.0 T 23-04-2016 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Gene3D G3DSA:3.30.230.10 490 605 7.7E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PANTHER PTHR23115:SF66 262 290 0.0 T 23-04-2016 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 SUPERFAMILY SSF54211 485 606 5.06E-43 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 SUPERFAMILY SSF54980 610 699 6.12E-31 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 700 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Gene3D G3DSA:2.40.30.10 312 411 2.4E-37 T 23-04-2016 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Pfam PF14492 Elongation Factor G, domain II 410 483 4.7E-35 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Gene3D G3DSA:3.30.70.240 606 693 1.8E-32 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 SUPERFAMILY SSF54980 410 487 1.83E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 SUPERFAMILY SSF50447 255 282 3.98E-36 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 SUPERFAMILY SSF50447 311 408 3.98E-36 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Pfam PF00009 Elongation factor Tu GTP binding domain 9 289 1.4E-67 T 23-04-2016 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Pfam PF03144 Elongation factor Tu domain 2 330 397 2.2E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 Gene3D G3DSA:3.30.70.870 412 486 4.4E-39 T 23-04-2016 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.8E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.8E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.8E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 SUPERFAMILY SSF52540 6 289 3.14E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PANTHER PTHR23115 262 290 0.0 T 23-04-2016 RBRH_RS02190 cfa1e6540f837d9bc860438461ba8074 703 PANTHER PTHR23115 309 700 0.0 T 23-04-2016 RBRH_RS08320 e73f3a31b04ac64561156667a10a05c4 156 Pfam PF11870 Domain of unknown function (DUF3390) 67 153 5.5E-10 T 23-04-2016 IPR024569 4Fe-4S binding protein, C-terminal RBRH_RS08320 e73f3a31b04ac64561156667a10a05c4 156 PANTHER PTHR30296 9 71 3.1E-20 T 23-04-2016 RBRH_RS08320 e73f3a31b04ac64561156667a10a05c4 156 Pfam PF02754 Cysteine-rich domain 10 71 1.3E-9 T 23-04-2016 IPR004017 Cysteine-rich domain RBRH_RS08320 e73f3a31b04ac64561156667a10a05c4 156 PANTHER PTHR30296:SF0 9 71 3.1E-20 T 23-04-2016 RBRH_RS09195 48de314ccb2b04a1e4efe85034a8ae6c 211 Pfam PF13548 Domain of unknown function (DUF4126) 6 175 1.2E-47 T 23-04-2016 IPR025196 Domain of unknown function DUF4126 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 Gene3D G3DSA:2.70.210.12 2 156 2.3E-59 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 PIRSF PIRSF002401 1 372 4.7E-134 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 SUPERFAMILY SSF82051 2 158 1.57E-57 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 PANTHER PTHR11702 1 365 1.5E-164 T 23-04-2016 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.851 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 Pfam PF01018 GTP1/OBG 3 158 1.8E-61 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 8.6E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 8.6E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 8.6E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 8.6E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 1.7E-143 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 Gene3D G3DSA:3.40.50.300 160 336 1.1E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 SUPERFAMILY SSF52540 151 339 3.83E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 Pfam PF01926 50S ribosome-binding GTPase 161 285 2.0E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS01415 f9db090857cf33a2ae2084a912e29640 378 PANTHER PTHR11702:SF3 1 365 1.5E-164 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 PANTHER PTHR30419:SF8 1 305 6.7E-109 T 23-04-2016 RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 Gene3D G3DSA:1.10.10.10 1 85 2.7E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 SUPERFAMILY SSF46785 1 85 3.67E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 Gene3D G3DSA:3.40.190.10 90 174 1.7E-13 T 23-04-2016 RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 Pfam PF03466 LysR substrate binding domain 89 289 1.0E-38 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 SUPERFAMILY SSF53850 90 292 1.81E-35 T 23-04-2016 RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 Gene3D G3DSA:3.40.190.10 175 262 3.0E-24 T 23-04-2016 RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-22 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS11845 d8405b49be9dd85fc8a69c1d0d0cff4b 305 PANTHER PTHR30419 1 305 6.7E-109 T 23-04-2016 RBRH_RS12165 77ed120a3757aa8834ded032488edb36 122 PIRSF PIRSF020555 1 122 1.1E-45 T 23-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats RBRH_RS12165 77ed120a3757aa8834ded032488edb36 122 Pfam PF16068 Domain of unknown function (DUF4810) 32 115 5.6E-34 T 23-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 PANTHER PTHR11075 1 356 3.4E-172 T 23-04-2016 RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 SMART SM00937 63 178 9.1E-67 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 Pfam PF03462 PCRF domain 13 203 3.4E-73 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 Gene3D G3DSA:3.30.160.20 213 289 1.5E-36 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.982 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 SUPERFAMILY SSF75620 12 353 3.79E-138 T 23-04-2016 RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 355 5.4E-166 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 Pfam PF00472 RF-1 domain 214 321 6.1E-43 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 Gene3D G3DSA:1.20.58.410 8 93 1.2E-16 T 23-04-2016 RBRH_RS04975 ad10d2d6ec3afd947abe87243dc084ad 360 PANTHER PTHR11075:SF9 1 356 3.4E-172 T 23-04-2016 RBRH_RS09685 0cc8fd766cb5faa81a4608e4151a1ee3 168 PANTHER PTHR33164 7 153 6.2E-48 T 23-04-2016 RBRH_RS09685 0cc8fd766cb5faa81a4608e4151a1ee3 168 PANTHER PTHR33164:SF13 7 153 6.2E-48 T 23-04-2016 RBRH_RS09685 0cc8fd766cb5faa81a4608e4151a1ee3 168 SUPERFAMILY SSF46785 8 143 2.23E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS09685 0cc8fd766cb5faa81a4608e4151a1ee3 168 SMART SM00347 27 129 8.3E-18 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS09685 0cc8fd766cb5faa81a4608e4151a1ee3 168 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 9 140 3.2E-45 T 23-04-2016 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 RBRH_RS09685 0cc8fd766cb5faa81a4608e4151a1ee3 168 Gene3D G3DSA:1.10.10.10 8 142 1.9E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS09685 0cc8fd766cb5faa81a4608e4151a1ee3 168 Pfam PF01047 MarR family 34 94 1.3E-10 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS07685 38b579c9c9d63f58c51998d402263630 165 Hamap MF_00761 UPF0303 protein . 4 155 32.507 T 23-04-2016 IPR010371 Uncharacterised protein family UPF0303 RBRH_RS07685 38b579c9c9d63f58c51998d402263630 165 PIRSF PIRSF008757 1 164 2.5E-60 T 23-04-2016 IPR010371 Uncharacterised protein family UPF0303 RBRH_RS07685 38b579c9c9d63f58c51998d402263630 165 Pfam PF03928 Haem-degrading 22 149 3.1E-30 T 23-04-2016 IPR005624 Haem-degrading RBRH_RS07685 38b579c9c9d63f58c51998d402263630 165 PANTHER PTHR28255 1 164 8.1E-39 T 23-04-2016 RBRH_RS07685 38b579c9c9d63f58c51998d402263630 165 PANTHER PTHR28255:SF1 1 164 8.1E-39 T 23-04-2016 RBRH_RS07685 38b579c9c9d63f58c51998d402263630 165 SUPERFAMILY SSF143744 13 152 5.36E-27 T 23-04-2016 RBRH_RS04150 930902ea57b7abcc38c5f3f84ee7a016 90 Gene3D G3DSA:1.10.287.1040 19 81 3.4E-24 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RBRH_RS04150 930902ea57b7abcc38c5f3f84ee7a016 90 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 19 73 2.4E-20 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RBRH_RS04150 930902ea57b7abcc38c5f3f84ee7a016 90 PANTHER PTHR34137 19 90 7.5E-18 T 23-04-2016 RBRH_RS04150 930902ea57b7abcc38c5f3f84ee7a016 90 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 19 60 5.0E-6 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RBRH_RS04150 930902ea57b7abcc38c5f3f84ee7a016 90 SUPERFAMILY SSF116842 19 80 1.83E-18 T 23-04-2016 RBRH_RS04150 930902ea57b7abcc38c5f3f84ee7a016 90 Pfam PF02609 Exonuclease VII small subunit 20 70 7.3E-19 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RBRH_RS04150 930902ea57b7abcc38c5f3f84ee7a016 90 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 19 79 14.279 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 PANTHER PTHR30525 6 397 1.4E-213 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 6 386 46.461 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 SUPERFAMILY SSF51735 6 152 1.52E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 Gene3D G3DSA:1.10.1740.10 306 388 1.0E-30 T 23-04-2016 RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 134 6.4E-46 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 PIRSF PIRSF006205 3 393 8.6E-151 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 Gene3D G3DSA:3.40.50.720 3 152 7.5E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 Pfam PF13288 DXP reductoisomerase C-terminal domain 265 381 1.7E-43 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 SUPERFAMILY SSF55347 128 268 4.58E-58 T 23-04-2016 RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 389 1.1E-151 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 SUPERFAMILY SSF69055 296 388 5.89E-31 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS06470 ba2936f17a82da0ac4302bb93c72ac4a 408 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 148 233 2.4E-37 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS10970 9c273a79bafffca8e00e06976e862871 302 SUPERFAMILY SSF55811 148 284 2.44E-18 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS10970 9c273a79bafffca8e00e06976e862871 302 Gene3D G3DSA:3.90.79.10 82 284 1.2E-41 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS10970 9c273a79bafffca8e00e06976e862871 302 Pfam PF00293 NUDIX domain 145 259 1.2E-7 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RBRH_RS10970 9c273a79bafffca8e00e06976e862871 302 Pfam PF15916 Domain of unknown function (DUF4743) 5 114 1.1E-33 T 23-04-2016 IPR031804 Domain of unknown function DUF4743 RBRH_RS10970 9c273a79bafffca8e00e06976e862871 302 PANTHER PTHR13622:SF8 146 284 6.0E-35 T 23-04-2016 RBRH_RS10970 9c273a79bafffca8e00e06976e862871 302 PANTHER PTHR13622:SF8 14 124 6.0E-35 T 23-04-2016 RBRH_RS10970 9c273a79bafffca8e00e06976e862871 302 PANTHER PTHR13622 146 284 6.0E-35 T 23-04-2016 RBRH_RS10970 9c273a79bafffca8e00e06976e862871 302 PANTHER PTHR13622 14 124 6.0E-35 T 23-04-2016 RBRH_RS11005 9c847f4433de08e644cb409e25ee4b22 229 PANTHER PTHR36504 20 220 7.4E-19 T 23-04-2016 RBRH_RS11005 9c847f4433de08e644cb409e25ee4b22 229 Gene3D G3DSA:2.60.450.10 47 198 2.0E-34 T 23-04-2016 RBRH_RS11005 9c847f4433de08e644cb409e25ee4b22 229 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 28 202 25.898 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RBRH_RS11005 9c847f4433de08e644cb409e25ee4b22 229 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 46 202 2.6E-42 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RBRH_RS11005 9c847f4433de08e644cb409e25ee4b22 229 Pfam PF03968 OstA-like protein 56 175 6.8E-28 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 Gene3D G3DSA:3.30.559.10 349 585 1.3E-83 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 6 586 5.6E-221 T 23-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 PANTHER PTHR23151 149 324 1.2E-236 T 23-04-2016 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 PANTHER PTHR23151 24 124 1.2E-236 T 23-04-2016 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 PANTHER PTHR23151 342 586 1.2E-236 T 23-04-2016 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 Gene3D G3DSA:2.40.50.100 5 80 3.2E-23 T 23-04-2016 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 Gene3D G3DSA:2.40.50.100 152 227 1.4E-22 T 23-04-2016 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 Pfam PF02817 e3 binding domain 284 317 1.5E-15 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 SUPERFAMILY SSF51230 151 242 6.67E-24 T 23-04-2016 IPR011053 Single hybrid motif RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 SUPERFAMILY SSF51230 3 92 8.77E-23 T 23-04-2016 IPR011053 Single hybrid motif RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 361 586 1.9E-78 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 SUPERFAMILY SSF47005 277 322 8.37E-13 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 174 203 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 SUPERFAMILY SSF52777 348 586 4.31E-83 T 23-04-2016 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 Gene3D G3DSA:4.10.320.10 275 323 5.1E-20 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 Pfam PF00364 Biotin-requiring enzyme 152 223 1.5E-21 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 Pfam PF00364 Biotin-requiring enzyme 6 77 2.4E-21 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 PANTHER PTHR23151:SF68 149 324 1.2E-236 T 23-04-2016 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 PANTHER PTHR23151:SF68 24 124 1.2E-236 T 23-04-2016 RBRH_RS08345 5423641cc72275141168c27d5a6e7c0e 586 PANTHER PTHR23151:SF68 342 586 1.2E-236 T 23-04-2016 RBRH_RS01640 12851a330e380f595d4fed056df6638c 385 SUPERFAMILY SSF52540 1 214 5.26E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01640 12851a330e380f595d4fed056df6638c 385 PANTHER PTHR34388 1 319 2.6E-58 T 23-04-2016 RBRH_RS01640 12851a330e380f595d4fed056df6638c 385 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 319 4.1E-85 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 RBRH_RS01640 12851a330e380f595d4fed056df6638c 385 Gene3D G3DSA:1.20.272.20 227 357 1.8E-40 T 23-04-2016 RBRH_RS01640 12851a330e380f595d4fed056df6638c 385 SUPERFAMILY SSF48019 216 322 3.4E-26 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RBRH_RS01640 12851a330e380f595d4fed056df6638c 385 Pfam PF06144 DNA polymerase III, delta subunit 20 193 9.4E-24 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 RBRH_RS01640 12851a330e380f595d4fed056df6638c 385 Gene3D G3DSA:1.10.8.60 142 226 2.4E-35 T 23-04-2016 RBRH_RS01640 12851a330e380f595d4fed056df6638c 385 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 220 318 2.3E-11 T 23-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS01640 12851a330e380f595d4fed056df6638c 385 Gene3D G3DSA:3.40.50.300 1 138 6.2E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11660 80187fc7eed661d7ce51f4967f3e0e0d 195 SUPERFAMILY SSF53697 3 189 3.64E-38 T 23-04-2016 RBRH_RS11660 80187fc7eed661d7ce51f4967f3e0e0d 195 Pfam PF13580 SIS domain 10 144 1.9E-23 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RBRH_RS11660 80187fc7eed661d7ce51f4967f3e0e0d 195 PANTHER PTHR30390 3 195 3.4E-55 T 23-04-2016 RBRH_RS11660 80187fc7eed661d7ce51f4967f3e0e0d 195 Gene3D G3DSA:3.40.50.10490 4 189 2.3E-41 T 23-04-2016 RBRH_RS11660 80187fc7eed661d7ce51f4967f3e0e0d 195 PANTHER PTHR30390:SF5 3 195 3.4E-55 T 23-04-2016 RBRH_RS01185 9809c18eb8d3950eb64d5840769a4af1 332 Gene3D G3DSA:1.20.1260.10 37 291 1.6E-103 T 23-04-2016 IPR012347 Ferritin-related RBRH_RS01185 9809c18eb8d3950eb64d5840769a4af1 332 PANTHER PTHR30458 23 329 1.5E-163 T 23-04-2016 RBRH_RS01185 9809c18eb8d3950eb64d5840769a4af1 332 SUPERFAMILY SSF47240 47 290 1.51E-83 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS01185 9809c18eb8d3950eb64d5840769a4af1 332 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 27 315 8.0E-163 T 23-04-2016 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149+1.14.13.14|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176|UniPathway: UPA00930 RBRH_RS01185 9809c18eb8d3950eb64d5840769a4af1 332 PANTHER PTHR30458:SF0 23 329 1.5E-163 T 23-04-2016 RBRH_RS01185 9809c18eb8d3950eb64d5840769a4af1 332 Pfam PF05138 Phenylacetic acid catabolic protein 37 311 4.6E-103 T 23-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 RBRH_RS04690 a2010085ba2ce680ba52f868f95308e0 285 Gene3D G3DSA:3.20.20.70 13 268 1.5E-49 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS04690 a2010085ba2ce680ba52f868f95308e0 285 Hamap MF_00443 Thiazole synthase [thiG]. 9 264 41.706 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RBRH_RS04690 a2010085ba2ce680ba52f868f95308e0 285 SUPERFAMILY SSF110399 8 250 1.31E-80 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RBRH_RS04690 a2010085ba2ce680ba52f868f95308e0 285 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 258 1.7E-106 T 23-04-2016 RBRH_RS04690 a2010085ba2ce680ba52f868f95308e0 285 PANTHER PTHR34266 4 269 8.8E-134 T 23-04-2016 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 SMART SM00411 1 91 1.1E-39 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 Gene3D G3DSA:4.10.520.10 1 92 9.9E-33 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 PANTHER PTHR33175:SF5 1 108 4.9E-42 T 23-04-2016 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 SUPERFAMILY SSF47729 1 92 6.04E-30 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 PANTHER PTHR33175 1 108 4.9E-42 T 23-04-2016 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-28 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.2E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.2E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.2E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.677 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RBRH_RS02975 4b0736b7394e2ad001269d4badbb205a 109 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 1.1E-37 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 Pfam PF13633 Prokaryotic N-terminal methylation site 19 43 2.7E-11 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 PANTHER PTHR30093 18 154 3.1E-65 T 23-04-2016 RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 PANTHER PTHR30093:SF9 18 154 3.1E-65 T 23-04-2016 RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 42 3.4E-10 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 57 75 1.7E-16 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 21 46 1.7E-16 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 20 154 4.7E-60 T 23-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 Gene3D G3DSA:3.30.700.10 22 86 2.4E-10 T 23-04-2016 RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 Pfam PF08334 Type II secretion system (T2SS), protein G 44 153 1.1E-44 T 23-04-2016 IPR013545 Type II secretion system protein G RBRH_RS00375 8edae3c13bc3ca0798f11d6c875d8151 154 SUPERFAMILY SSF54523 48 153 8.37E-41 T 23-04-2016 RBRH_RS11100 3a2e058d34c4a4defa90ea68b6ff91d9 237 PANTHER PTHR18895:SF60 29 237 7.5E-32 T 23-04-2016 RBRH_RS11100 3a2e058d34c4a4defa90ea68b6ff91d9 237 SUPERFAMILY SSF53335 41 232 8.0E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11100 3a2e058d34c4a4defa90ea68b6ff91d9 237 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 40 233 4.0E-39 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS11100 3a2e058d34c4a4defa90ea68b6ff91d9 237 PANTHER PTHR18895 29 237 7.5E-32 T 23-04-2016 RBRH_RS11100 3a2e058d34c4a4defa90ea68b6ff91d9 237 Pfam PF03602 Conserved hypothetical protein 95 42 188 6.8E-42 T 23-04-2016 RBRH_RS11100 3a2e058d34c4a4defa90ea68b6ff91d9 237 Gene3D G3DSA:3.40.50.150 35 235 3.4E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.7E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.7E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.7E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 Gene3D G3DSA:3.40.50.720 1 248 1.6E-88 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 SUPERFAMILY SSF51735 7 248 4.93E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PANTHER PTHR24322 12 140 5.9E-61 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PANTHER PTHR24322 156 188 5.9E-61 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 247 9.5E-102 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 8.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 191 6.8E-5 T 23-04-2016 RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 4.7E-67 T 23-04-2016 RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PANTHER PTHR24322:SF635 12 140 5.9E-61 T 23-04-2016 RBRH_RS03320 a28c569df98ca0f0fa214c389e73bdc4 249 PANTHER PTHR24322:SF635 156 188 5.9E-61 T 23-04-2016 RBRH_RS10425 fb41f00c2c4ba19170cdf6862c834514 382 Gene3D G3DSA:3.40.50.300 166 368 3.3E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10425 fb41f00c2c4ba19170cdf6862c834514 382 PANTHER PTHR30473:SF1 7 73 1.2E-155 T 23-04-2016 RBRH_RS10425 fb41f00c2c4ba19170cdf6862c834514 382 PANTHER PTHR30473:SF1 120 377 1.2E-155 T 23-04-2016 RBRH_RS10425 fb41f00c2c4ba19170cdf6862c834514 382 SUPERFAMILY SSF52540 165 344 2.62E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10425 fb41f00c2c4ba19170cdf6862c834514 382 Pfam PF02562 PhoH-like protein 167 369 6.0E-95 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 RBRH_RS10425 fb41f00c2c4ba19170cdf6862c834514 382 PANTHER PTHR30473 7 73 1.2E-155 T 23-04-2016 RBRH_RS10425 fb41f00c2c4ba19170cdf6862c834514 382 PANTHER PTHR30473 120 377 1.2E-155 T 23-04-2016 RBRH_RS01405 8ccf3e7621c12f65d14644746693f736 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01405 8ccf3e7621c12f65d14644746693f736 103 PANTHER PTHR21349 1 101 4.7E-44 T 23-04-2016 RBRH_RS01405 8ccf3e7621c12f65d14644746693f736 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.2E-35 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01405 8ccf3e7621c12f65d14644746693f736 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 3.4E-40 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RBRH_RS01405 8ccf3e7621c12f65d14644746693f736 103 SUPERFAMILY SSF141091 1 102 2.88E-38 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RBRH_RS01405 8ccf3e7621c12f65d14644746693f736 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.52 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04685 161f343677c75b802488ab2b7ff45cad 65 PANTHER PTHR34472 1 65 3.3E-14 T 23-04-2016 RBRH_RS04685 161f343677c75b802488ab2b7ff45cad 65 Gene3D G3DSA:3.10.20.30 1 65 1.7E-19 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS04685 161f343677c75b802488ab2b7ff45cad 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 1.8E-15 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis RBRH_RS04685 161f343677c75b802488ab2b7ff45cad 65 SUPERFAMILY SSF54285 1 65 1.6E-13 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RBRH_RS04685 161f343677c75b802488ab2b7ff45cad 65 Pfam PF02597 ThiS family 9 65 1.7E-10 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RBRH_RS04685 161f343677c75b802488ab2b7ff45cad 65 PANTHER PTHR34472:SF1 1 65 3.3E-14 T 23-04-2016 RBRH_RS01125 4227ae3973117b522a69d9aeebd9e8d4 315 PANTHER PTHR32338:SF9 4 313 9.2E-97 T 23-04-2016 RBRH_RS01125 4227ae3973117b522a69d9aeebd9e8d4 315 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 3 306 3.6E-135 T 23-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RBRH_RS01125 4227ae3973117b522a69d9aeebd9e8d4 315 SUPERFAMILY SSF55347 116 288 1.28E-35 T 23-04-2016 RBRH_RS01125 4227ae3973117b522a69d9aeebd9e8d4 315 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 307 51.037 T 23-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RBRH_RS01125 4227ae3973117b522a69d9aeebd9e8d4 315 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 15 102 3.4E-11 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RBRH_RS01125 4227ae3973117b522a69d9aeebd9e8d4 315 Gene3D G3DSA:3.40.50.720 33 124 1.9E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01125 4227ae3973117b522a69d9aeebd9e8d4 315 PANTHER PTHR32338 4 313 9.2E-97 T 23-04-2016 RBRH_RS01125 4227ae3973117b522a69d9aeebd9e8d4 315 Gene3D G3DSA:3.30.360.10 125 288 3.7E-36 T 23-04-2016 RBRH_RS01125 4227ae3973117b522a69d9aeebd9e8d4 315 SUPERFAMILY SSF51735 1 136 6.97E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01125 4227ae3973117b522a69d9aeebd9e8d4 315 SMART SM00859 4 105 5.2E-16 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RBRH_RS02755 00505ae6e24c04fe7259518012451330 67 Pfam PF01192 RNA polymerase Rpb6 8 58 2.0E-17 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS02755 00505ae6e24c04fe7259518012451330 67 PANTHER PTHR34476 2 62 1.9E-17 T 23-04-2016 RBRH_RS02755 00505ae6e24c04fe7259518012451330 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 3.6E-19 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS02755 00505ae6e24c04fe7259518012451330 67 SMART SM01409 8 59 1.5E-17 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS02755 00505ae6e24c04fe7259518012451330 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 16.9 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS02755 00505ae6e24c04fe7259518012451330 67 Gene3D G3DSA:3.90.940.10 1 63 1.1E-12 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS02755 00505ae6e24c04fe7259518012451330 67 SUPERFAMILY SSF63562 1 64 1.22E-21 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS00250 de472d865dc9d9f78f0fa3ec3fb343bf 519 Gene3D G3DSA:3.30.43.10 43 149 4.2E-21 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RBRH_RS00250 de472d865dc9d9f78f0fa3ec3fb343bf 519 PANTHER PTHR11748:SF3 48 508 5.3E-96 T 23-04-2016 IPR025650 Alkyldihydroxyacetonephosphate synthase GO:0008609|GO:0008610 KEGG: 00565+2.5.1.26|UniPathway: UPA00781 RBRH_RS00250 de472d865dc9d9f78f0fa3ec3fb343bf 519 Gene3D G3DSA:3.30.465.10 151 271 9.4E-29 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RBRH_RS00250 de472d865dc9d9f78f0fa3ec3fb343bf 519 SUPERFAMILY SSF56176 45 271 7.48E-51 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS00250 de472d865dc9d9f78f0fa3ec3fb343bf 519 SUPERFAMILY SSF55103 277 511 1.6E-31 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RBRH_RS00250 de472d865dc9d9f78f0fa3ec3fb343bf 519 Gene3D G3DSA:1.10.45.10 470 511 7.8E-11 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RBRH_RS00250 de472d865dc9d9f78f0fa3ec3fb343bf 519 Pfam PF01565 FAD binding domain 96 234 5.9E-32 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RBRH_RS00250 de472d865dc9d9f78f0fa3ec3fb343bf 519 Pfam PF02913 FAD linked oxidases, C-terminal domain 271 508 1.4E-28 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RBRH_RS00250 de472d865dc9d9f78f0fa3ec3fb343bf 519 PANTHER PTHR11748 48 508 5.3E-96 T 23-04-2016 RBRH_RS06750 037ff704ade8b635e21103975466ebea 216 Gene3D G3DSA:1.20.120.530 83 207 1.2E-26 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RBRH_RS06750 037ff704ade8b635e21103975466ebea 216 SUPERFAMILY SSF46785 10 104 1.73E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06750 037ff704ade8b635e21103975466ebea 216 Gene3D G3DSA:1.10.10.10 6 77 2.4E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06750 037ff704ade8b635e21103975466ebea 216 SUPERFAMILY SSF48008 85 210 1.65E-21 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RBRH_RS06750 037ff704ade8b635e21103975466ebea 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 4.5E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RBRH_RS06750 037ff704ade8b635e21103975466ebea 216 PANTHER PTHR11751 16 102 4.1E-21 T 23-04-2016 RBRH_RS06750 037ff704ade8b635e21103975466ebea 216 SMART SM00895 86 207 3.3E-18 T 23-04-2016 IPR011711 GntR, C-terminal RBRH_RS06750 037ff704ade8b635e21103975466ebea 216 PANTHER PTHR11751:SF436 16 102 4.1E-21 T 23-04-2016 RBRH_RS06750 037ff704ade8b635e21103975466ebea 216 Pfam PF07729 FCD domain 88 205 1.6E-22 T 23-04-2016 IPR011711 GntR, C-terminal RBRH_RS06750 037ff704ade8b635e21103975466ebea 216 SMART SM00345 18 76 4.5E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RBRH_RS04530 841abcb83b0865b8e8a49296f47d54a5 131 Gene3D G3DSA:3.90.1030.10 1 117 1.9E-49 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04530 841abcb83b0865b8e8a49296f47d54a5 131 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.7E-44 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04530 841abcb83b0865b8e8a49296f47d54a5 131 Pfam PF01196 Ribosomal protein L17 20 116 3.3E-34 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04530 841abcb83b0865b8e8a49296f47d54a5 131 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.314 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04530 841abcb83b0865b8e8a49296f47d54a5 131 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04530 841abcb83b0865b8e8a49296f47d54a5 131 PANTHER PTHR14413 1 119 3.5E-63 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04530 841abcb83b0865b8e8a49296f47d54a5 131 SUPERFAMILY SSF64263 1 119 1.14E-50 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 Gene3D G3DSA:3.50.50.60 1 189 3.0E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 Gene3D G3DSA:3.50.50.60 277 360 3.0E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 1 392 2.6E-92 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 SUPERFAMILY SSF51905 276 387 1.49E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 SUPERFAMILY SSF51905 1 178 1.49E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 PANTHER PTHR13789:SF214 154 392 2.6E-82 T 23-04-2016 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 PANTHER PTHR13789:SF214 1 137 2.6E-82 T 23-04-2016 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 PANTHER PTHR13789 154 392 2.6E-82 T 23-04-2016 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 PANTHER PTHR13789 1 137 2.6E-82 T 23-04-2016 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 Pfam PF01494 FAD binding domain 1 327 6.1E-17 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 RBRH_RS10640 f79a182886f6ed92c046816f9bfbb552 397 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 303 316 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RBRH_RS04500 4b832973782a113c95a42a269138d1cc 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.0E-36 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RBRH_RS04500 4b832973782a113c95a42a269138d1cc 72 SMART SM00316 2 72 0.004 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS04500 4b832973782a113c95a42a269138d1cc 72 SUPERFAMILY SSF50249 1 70 4.0E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04500 4b832973782a113c95a42a269138d1cc 72 Gene3D G3DSA:2.40.50.140 1 72 8.7E-38 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04500 4b832973782a113c95a42a269138d1cc 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.063 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RBRH_RS04500 4b832973782a113c95a42a269138d1cc 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 9.0E-27 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RBRH_RS04500 4b832973782a113c95a42a269138d1cc 72 PANTHER PTHR33370 1 72 2.5E-47 T 23-04-2016 RBRH_RS10440 3002f3f3f50b847eb25909869e8619ae 296 Pfam PF03471 Transporter associated domain 208 281 1.5E-18 T 23-04-2016 IPR005170 Transporter-associated domain RBRH_RS10440 3002f3f3f50b847eb25909869e8619ae 296 Gene3D G3DSA:3.10.580.10 59 196 7.5E-18 T 23-04-2016 RBRH_RS10440 3002f3f3f50b847eb25909869e8619ae 296 Gene3D G3DSA:3.30.465.10 197 281 2.1E-25 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RBRH_RS10440 3002f3f3f50b847eb25909869e8619ae 296 SUPERFAMILY SSF54631 68 201 1.52E-30 T 23-04-2016 RBRH_RS10440 3002f3f3f50b847eb25909869e8619ae 296 SMART SM01091 206 284 4.2E-26 T 23-04-2016 IPR005170 Transporter-associated domain RBRH_RS10440 3002f3f3f50b847eb25909869e8619ae 296 SUPERFAMILY SSF56176 205 284 3.27E-20 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS10440 3002f3f3f50b847eb25909869e8619ae 296 Pfam PF00571 CBS domain 135 189 4.1E-6 T 23-04-2016 IPR000644 CBS domain RBRH_RS10440 3002f3f3f50b847eb25909869e8619ae 296 Pfam PF00571 CBS domain 95 129 2.4E-4 T 23-04-2016 IPR000644 CBS domain RBRH_RS10440 3002f3f3f50b847eb25909869e8619ae 296 PANTHER PTHR22777 32 279 2.4E-99 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 SUPERFAMILY SSF82866 808 1031 1.57E-46 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PANTHER PTHR32063:SF13 1 1039 0.0 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1039 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 SUPERFAMILY SSF82714 182 271 2.22E-22 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 Gene3D G3DSA:3.30.70.1430 38 139 2.2E-33 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 SUPERFAMILY SSF82693 38 131 1.15E-25 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.9E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.9E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.9E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.9E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.9E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.9E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.9E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.9E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.9E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 Gene3D G3DSA:3.30.70.1430 568 671 2.5E-36 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 SUPERFAMILY SSF82693 566 671 1.78E-30 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 SUPERFAMILY SSF82714 723 810 1.27E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 Gene3D G3DSA:3.30.2090.10 722 812 2.0E-24 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 Gene3D G3DSA:3.30.2090.10 181 275 5.2E-26 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 PANTHER PTHR32063 1 1039 0.0 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 SUPERFAMILY SSF82693 274 330 6.41E-27 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 SUPERFAMILY SSF82866 296 497 6.67E-49 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 SUPERFAMILY SSF82693 135 182 6.41E-27 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 Gene3D G3DSA:1.10.3850.10 280 498 2.5E-59 T 23-04-2016 RBRH_RS10125 be45938d63ce18e02cee7d1e2d1afacd 1057 Gene3D G3DSA:1.10.3850.10 816 1029 1.4E-56 T 23-04-2016 RBRH_RS08120 3e3ba7caa4e76a62a5b3ede5696485b5 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 6.3E-22 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RBRH_RS08120 3e3ba7caa4e76a62a5b3ede5696485b5 381 Gene3D G3DSA:2.40.110.10 124 221 5.4E-34 T 23-04-2016 RBRH_RS08120 3e3ba7caa4e76a62a5b3ede5696485b5 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 119 2.2E-18 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RBRH_RS08120 3e3ba7caa4e76a62a5b3ede5696485b5 381 SUPERFAMILY SSF56645 1 231 1.2E-64 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RBRH_RS08120 3e3ba7caa4e76a62a5b3ede5696485b5 381 PANTHER PTHR10909 5 376 4.3E-108 T 23-04-2016 RBRH_RS08120 3e3ba7caa4e76a62a5b3ede5696485b5 381 Gene3D G3DSA:1.20.140.10 222 379 4.6E-51 T 23-04-2016 RBRH_RS08120 3e3ba7caa4e76a62a5b3ede5696485b5 381 Gene3D G3DSA:1.10.540.10 1 120 8.7E-24 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RBRH_RS08120 3e3ba7caa4e76a62a5b3ede5696485b5 381 SUPERFAMILY SSF47203 230 379 1.24E-41 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RBRH_RS08120 3e3ba7caa4e76a62a5b3ede5696485b5 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 378 2.7E-38 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RBRH_RS01855 0c14bf3f63467fb2a4d372e195c8d021 339 PANTHER PTHR34824 1 338 8.2E-97 T 23-04-2016 RBRH_RS01855 0c14bf3f63467fb2a4d372e195c8d021 339 PIRSF PIRSF005485 1 339 3.3E-113 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RBRH_RS01855 0c14bf3f63467fb2a4d372e195c8d021 339 Gene3D G3DSA:3.30.450.40 176 338 8.7E-41 T 23-04-2016 IPR029016 GAF domain-like RBRH_RS01855 0c14bf3f63467fb2a4d372e195c8d021 339 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 329 28.04 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RBRH_RS01855 0c14bf3f63467fb2a4d372e195c8d021 339 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 73 1.6E-6 T 23-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 RBRH_RS01855 0c14bf3f63467fb2a4d372e195c8d021 339 Pfam PF01628 HrcA protein C terminal domain 105 322 1.6E-59 T 23-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 RBRH_RS01855 0c14bf3f63467fb2a4d372e195c8d021 339 SUPERFAMILY SSF55781 71 338 1.57E-61 T 23-04-2016 IPR029016 GAF domain-like RBRH_RS01855 0c14bf3f63467fb2a4d372e195c8d021 339 Gene3D G3DSA:1.10.10.10 1 82 2.6E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS01855 0c14bf3f63467fb2a4d372e195c8d021 339 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 333 9.9E-95 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RBRH_RS01855 0c14bf3f63467fb2a4d372e195c8d021 339 SUPERFAMILY SSF46785 1 82 4.9E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 SUPERFAMILY SSF46548 2 154 1.33E-39 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 487 5.0E-226 T 23-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 Gene3D G3DSA:3.50.50.60 146 255 2.8E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 SUPERFAMILY SSF51971 377 481 4.24E-10 T 23-04-2016 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 131 3.4E-25 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 469 1.1E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 Gene3D G3DSA:3.50.50.60 398 477 6.2E-16 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 PANTHER PTHR11938:SF75 346 481 7.3E-142 T 23-04-2016 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 PANTHER PTHR11938:SF75 27 330 7.3E-142 T 23-04-2016 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 Gene3D G3DSA:1.10.1060.10 5 145 4.9E-41 T 23-04-2016 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 PRINTS PR00419 Adrenodoxin reductase family signature 297 311 1.6E-21 T 23-04-2016 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 1.6E-21 T 23-04-2016 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 1.6E-21 T 23-04-2016 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 Gene3D G3DSA:3.50.50.60 256 397 4.2E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 SUPERFAMILY SSF51971 142 411 9.65E-66 T 23-04-2016 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 PANTHER PTHR11938 346 481 7.3E-142 T 23-04-2016 RBRH_RS04660 7f24bf8af5c4d40fa7ef4f5c5c108ff2 488 PANTHER PTHR11938 27 330 7.3E-142 T 23-04-2016 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 SMART SM00382 145 408 0.0036 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 8 463 2.3E-250 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 Gene3D G3DSA:1.10.1140.10 349 463 5.8E-55 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 11 76 4.5E-19 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 PANTHER PTHR15184 8 463 0.0 T 23-04-2016 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 Gene3D G3DSA:2.40.10.170 7 78 5.4E-27 T 23-04-2016 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 SUPERFAMILY SSF50615 8 78 7.85E-24 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 SUPERFAMILY SSF52540 80 350 5.72E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 SUPERFAMILY SSF47917 348 462 8.11E-54 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 PANTHER PTHR15184:SF44 8 463 0.0 T 23-04-2016 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 Hamap MF_01347 ATP synthase subunit beta [atpB]. 6 463 57.038 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 345 4.0E-65 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS00545 857a1e71bdc22259dde96ea52edbe558 463 Gene3D G3DSA:3.40.50.300 80 346 2.3E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00590 60d8006f166b15c6ae3a4c9ad417fafd 462 Gene3D G3DSA:3.30.1330.90 11 156 2.2E-51 T 23-04-2016 IPR029009 Allosteric substrate binding domain RBRH_RS00590 60d8006f166b15c6ae3a4c9ad417fafd 462 PANTHER PTHR30182:SF1 1 460 4.3E-228 T 23-04-2016 RBRH_RS00590 60d8006f166b15c6ae3a4c9ad417fafd 462 PANTHER PTHR30182 1 460 4.3E-228 T 23-04-2016 RBRH_RS00590 60d8006f166b15c6ae3a4c9ad417fafd 462 Pfam PF03313 Serine dehydratase alpha chain 187 456 5.0E-104 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit RBRH_RS00590 60d8006f166b15c6ae3a4c9ad417fafd 462 SUPERFAMILY SSF143548 17 156 3.66E-43 T 23-04-2016 IPR029009 Allosteric substrate binding domain RBRH_RS00590 60d8006f166b15c6ae3a4c9ad417fafd 462 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 459 9.5E-207 T 23-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RBRH_RS00590 60d8006f166b15c6ae3a4c9ad417fafd 462 Pfam PF03315 Serine dehydratase beta chain 4 155 1.4E-54 T 23-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RBRH_RS03705 acf285bec8099c30e6b2df73e1583e58 301 Pfam PF00899 ThiF family 41 185 1.9E-33 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RBRH_RS03705 acf285bec8099c30e6b2df73e1583e58 301 Gene3D G3DSA:3.40.50.720 27 290 1.2E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS03705 acf285bec8099c30e6b2df73e1583e58 301 SUPERFAMILY SSF69572 30 218 6.02E-57 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RBRH_RS03705 acf285bec8099c30e6b2df73e1583e58 301 SUPERFAMILY SSF69572 257 291 6.02E-57 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RBRH_RS03705 acf285bec8099c30e6b2df73e1583e58 301 PANTHER PTHR10953:SF159 32 186 9.8E-88 T 23-04-2016 RBRH_RS03705 acf285bec8099c30e6b2df73e1583e58 301 PANTHER PTHR10953 219 289 9.8E-88 T 23-04-2016 RBRH_RS03705 acf285bec8099c30e6b2df73e1583e58 301 PANTHER PTHR10953:SF159 219 289 9.8E-88 T 23-04-2016 RBRH_RS03705 acf285bec8099c30e6b2df73e1583e58 301 PANTHER PTHR10953 32 186 9.8E-88 T 23-04-2016 RBRH_RS13760 4d8583e053f8f9c6c73a28f16d50da19 76 Pfam PF01513 ATP-NAD kinase 1 75 2.6E-16 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RBRH_RS13760 4d8583e053f8f9c6c73a28f16d50da19 76 PANTHER PTHR20275 1 74 1.4E-17 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RBRH_RS13760 4d8583e053f8f9c6c73a28f16d50da19 76 SUPERFAMILY SSF111331 1 74 2.49E-21 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RBRH_RS13760 4d8583e053f8f9c6c73a28f16d50da19 76 Gene3D G3DSA:3.40.50.10330 1 73 5.9E-22 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RBRH_RS07050 a39fad81464790f5000c7164ffd7f7d1 176 Pfam PF04279 Intracellular septation protein A 1 176 1.3E-68 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RBRH_RS07050 a39fad81464790f5000c7164ffd7f7d1 176 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 18.817 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RBRH_RS07050 a39fad81464790f5000c7164ffd7f7d1 176 PANTHER PTHR36917 1 176 5.4E-60 T 23-04-2016 RBRH_RS07050 a39fad81464790f5000c7164ffd7f7d1 176 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 1.4E-54 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RBRH_RS07050 a39fad81464790f5000c7164ffd7f7d1 176 PANTHER PTHR36917:SF1 1 176 5.4E-60 T 23-04-2016 RBRH_RS09365 7bed363713838b6864ff52a66c6da204 210 PANTHER PTHR30328:SF16 3 207 2.8E-55 T 23-04-2016 RBRH_RS09365 7bed363713838b6864ff52a66c6da204 210 Gene3D G3DSA:1.10.357.10 64 205 4.7E-37 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RBRH_RS09365 7bed363713838b6864ff52a66c6da204 210 PANTHER PTHR30328 3 207 2.8E-55 T 23-04-2016 RBRH_RS09365 7bed363713838b6864ff52a66c6da204 210 Gene3D G3DSA:1.10.10.60 3 63 6.5E-23 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS09365 7bed363713838b6864ff52a66c6da204 210 SUPERFAMILY SSF46689 4 83 1.74E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS09365 7bed363713838b6864ff52a66c6da204 210 SUPERFAMILY SSF48498 83 208 1.78E-33 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RBRH_RS09365 7bed363713838b6864ff52a66c6da204 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.8E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS09365 7bed363713838b6864ff52a66c6da204 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 5.2E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS09365 7bed363713838b6864ff52a66c6da204 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 5.2E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS00500 cc67afa512d5973aefd0a1eb35df0e9e 295 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 32 208 9.9E-60 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RBRH_RS00500 cc67afa512d5973aefd0a1eb35df0e9e 295 SUPERFAMILY SSF110849 36 127 4.45E-29 T 23-04-2016 IPR003115 ParB/Sulfiredoxin RBRH_RS00500 cc67afa512d5973aefd0a1eb35df0e9e 295 SMART SM00470 35 125 1.1E-34 T 23-04-2016 IPR003115 ParB/Sulfiredoxin RBRH_RS00500 cc67afa512d5973aefd0a1eb35df0e9e 295 Pfam PF02195 ParB-like nuclease domain 37 125 4.7E-28 T 23-04-2016 IPR003115 ParB/Sulfiredoxin RBRH_RS00500 cc67afa512d5973aefd0a1eb35df0e9e 295 PANTHER PTHR33375 1 293 5.1E-93 T 23-04-2016 RBRH_RS00500 cc67afa512d5973aefd0a1eb35df0e9e 295 SUPERFAMILY SSF109709 118 224 7.32E-35 T 23-04-2016 RBRH_RS00500 cc67afa512d5973aefd0a1eb35df0e9e 295 Gene3D G3DSA:3.90.1530.10 29 131 4.0E-39 T 23-04-2016 RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 SUPERFAMILY SSF55048 127 195 1.31E-17 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 Gene3D G3DSA:3.30.70.250 123 194 1.2E-29 T 23-04-2016 RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 SUPERFAMILY SSF52151 2 126 5.58E-70 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 SUPERFAMILY SSF52151 196 289 5.58E-70 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 PIRSF PIRSF000446 1 309 2.6E-105 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 304 2.2E-38 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 Pfam PF00698 Acyl transferase domain 5 275 1.1E-33 T 23-04-2016 IPR014043 Acyl transferase RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 289 7.6E-102 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 PANTHER PTHR10982 1 306 1.9E-134 T 23-04-2016 RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 Gene3D G3DSA:3.40.366.10 195 288 4.5E-67 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RBRH_RS03315 05ee90f4d1367774d66fd1461490dc69 310 Gene3D G3DSA:3.40.366.10 2 120 4.5E-67 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RBRH_RS09915 7cdfb7a651b8523773455dc6f1821e0d 235 SUPERFAMILY SSF52540 46 232 9.46E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09915 7cdfb7a651b8523773455dc6f1821e0d 235 PANTHER PTHR24220:SF476 4 14 7.4E-83 T 23-04-2016 RBRH_RS09915 7cdfb7a651b8523773455dc6f1821e0d 235 PANTHER PTHR24220:SF476 46 233 7.4E-83 T 23-04-2016 RBRH_RS09915 7cdfb7a651b8523773455dc6f1821e0d 235 SMART SM00382 58 232 1.5E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS09915 7cdfb7a651b8523773455dc6f1821e0d 235 Gene3D G3DSA:3.40.50.300 3 232 2.4E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09915 7cdfb7a651b8523773455dc6f1821e0d 235 Pfam PF00005 ABC transporter 49 181 7.8E-19 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS09915 7cdfb7a651b8523773455dc6f1821e0d 235 PANTHER PTHR24220 4 14 7.4E-83 T 23-04-2016 RBRH_RS09915 7cdfb7a651b8523773455dc6f1821e0d 235 PANTHER PTHR24220 46 233 7.4E-83 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 Gene3D G3DSA:3.90.640.10 234 296 6.9E-19 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 Gene3D G3DSA:3.30.1490.110 85 156 6.6E-18 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 Gene3D G3DSA:3.30.420.40 157 208 1.2E-25 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 Gene3D G3DSA:3.30.420.40 3 82 1.2E-25 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 PANTHER PTHR32432 1 406 5.9E-155 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 SUPERFAMILY SSF53067 7 196 1.43E-62 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 Gene3D G3DSA:3.30.420.40 297 351 1.6E-33 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 Gene3D G3DSA:3.30.420.40 209 233 1.6E-33 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 PANTHER PTHR32432:SF4 1 406 5.9E-155 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 7.9E-33 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 410 31.461 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 SUPERFAMILY SSF53067 197 375 3.24E-49 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 375 4.7E-149 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 PIRSF PIRSF003101 1 410 3.7E-151 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 Pfam PF14450 Cell division protein FtsA 206 373 1.3E-24 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 Pfam PF14450 Cell division protein FtsA 10 193 2.6E-11 T 23-04-2016 RBRH_RS01310 d025faeafb6e9a57a4e577d449f87097 410 SMART SM00842 9 195 8.2E-106 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RBRH_RS02305 9129b3bbdc3fe52c3e1643839b17cbd9 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.5E-25 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02305 9129b3bbdc3fe52c3e1643839b17cbd9 55 PANTHER PTHR15238 1 55 2.0E-22 T 23-04-2016 RBRH_RS02305 9129b3bbdc3fe52c3e1643839b17cbd9 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.339 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02305 9129b3bbdc3fe52c3e1643839b17cbd9 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02305 9129b3bbdc3fe52c3e1643839b17cbd9 55 SUPERFAMILY SSF57829 1 53 3.85E-19 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RBRH_RS02305 9129b3bbdc3fe52c3e1643839b17cbd9 55 Pfam PF00471 Ribosomal protein L33 8 53 2.9E-17 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 SUPERFAMILY SSF51735 8 193 1.24E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 180 186 - T 23-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 Gene3D G3DSA:3.30.360.10 190 488 4.4E-122 T 23-04-2016 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 SUPERFAMILY SSF55347 180 488 1.44E-113 T 23-04-2016 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 192 487 4.1E-114 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 222 239 6.54E-46 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 146 159 6.54E-46 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 240 256 6.54E-46 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 331 357 6.54E-46 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 170 198 6.54E-46 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 14 489 2.6E-168 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 PIRSF PIRSF000110 1 491 1.4E-166 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 PANTHER PTHR23429:SF0 13 490 5.4E-204 T 23-04-2016 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 PANTHER PTHR23429 13 490 5.4E-204 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 13 489 80.145 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 Gene3D G3DSA:3.40.50.720 12 189 6.8E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06115 d4603f09231472a6f992d3be2253b613 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 17 190 2.3E-55 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS07800 f265b9668d49ed86674e055206ed81c1 173 Pfam PF14437 MafB19-like deaminase 17 159 1.1E-28 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RBRH_RS07800 f265b9668d49ed86674e055206ed81c1 173 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 19 160 47.749 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RBRH_RS07800 f265b9668d49ed86674e055206ed81c1 173 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 64 101 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RBRH_RS07800 f265b9668d49ed86674e055206ed81c1 173 SUPERFAMILY SSF53927 11 162 8.87E-58 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RBRH_RS07800 f265b9668d49ed86674e055206ed81c1 173 PANTHER PTHR11079 13 162 2.3E-47 T 23-04-2016 RBRH_RS07800 f265b9668d49ed86674e055206ed81c1 173 Gene3D G3DSA:3.40.140.10 12 158 6.6E-61 T 23-04-2016 RBRH_RS10250 94284f26f5f427268531815b6c200561 159 SUPERFAMILY SSF55040 11 155 5.1E-59 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RBRH_RS10250 94284f26f5f427268531815b6c200561 159 Gene3D G3DSA:3.30.70.640 3 157 4.0E-67 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RBRH_RS10250 94284f26f5f427268531815b6c200561 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.1E-60 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 RBRH_RS10250 94284f26f5f427268531815b6c200561 159 Pfam PF01967 MoaC family 15 150 1.1E-53 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RBRH_RS10250 94284f26f5f427268531815b6c200561 159 PANTHER PTHR22960 1 158 3.3E-90 T 23-04-2016 RBRH_RS10250 94284f26f5f427268531815b6c200561 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.825 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 SUPERFAMILY SSF53850 89 302 2.87E-35 T 23-04-2016 RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.79E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.79E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.79E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 Pfam PF03466 LysR substrate binding domain 89 302 1.2E-37 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.0E-22 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 Gene3D G3DSA:3.40.190.10 174 276 1.7E-41 T 23-04-2016 RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 PANTHER PTHR30346 1 299 4.8E-91 T 23-04-2016 RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 PANTHER PTHR30346:SF6 1 299 4.8E-91 T 23-04-2016 RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 Gene3D G3DSA:3.40.190.10 90 173 3.3E-25 T 23-04-2016 RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 SUPERFAMILY SSF46785 3 88 2.18E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS02465 b81eda1ed7a209e7c0f1b33d99843695 306 Gene3D G3DSA:1.10.10.10 2 80 4.3E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS04915 67a56b804b5d4eece080526371a43282 219 PANTHER PTHR30055 16 188 4.5E-31 T 23-04-2016 RBRH_RS04915 67a56b804b5d4eece080526371a43282 219 Gene3D G3DSA:1.10.10.60 20 78 5.7E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS04915 67a56b804b5d4eece080526371a43282 219 SUPERFAMILY SSF46689 20 99 2.87E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS04915 67a56b804b5d4eece080526371a43282 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 78 6.5E-16 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS04915 67a56b804b5d4eece080526371a43282 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 1.6E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS04915 67a56b804b5d4eece080526371a43282 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 1.6E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS04915 67a56b804b5d4eece080526371a43282 219 PANTHER PTHR30055:SF47 16 188 4.5E-31 T 23-04-2016 RBRH_RS04915 67a56b804b5d4eece080526371a43282 219 Gene3D G3DSA:1.10.357.10 79 165 1.4E-13 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RBRH_RS04915 67a56b804b5d4eece080526371a43282 219 SUPERFAMILY SSF48498 102 191 5.78E-14 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 SUPERFAMILY SSF53223 1 121 7.67E-40 T 23-04-2016 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 Gene3D G3DSA:3.40.50.720 138 263 1.6E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.636 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 1.8E-39 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 PANTHER PTHR10025 1 283 8.6E-159 T 23-04-2016 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 2.6E-70 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 7.3E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 7.3E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 7.3E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 7.3E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 7.3E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 7.3E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 7.3E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 Gene3D G3DSA:3.40.192.10 7 137 8.1E-50 T 23-04-2016 RBRH_RS08365 3144fed353b7ffe44b4f716daef09a1e 283 SUPERFAMILY SSF51735 122 280 2.41E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS10635 115cae55d8193567a86b992da718cf5d 462 PANTHER PTHR10804 11 456 5.7E-134 T 23-04-2016 RBRH_RS10635 115cae55d8193567a86b992da718cf5d 462 SMART SM01011 6 142 3.2E-53 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RBRH_RS10635 115cae55d8193567a86b992da718cf5d 462 PANTHER PTHR10804:SF17 11 456 5.7E-134 T 23-04-2016 RBRH_RS10635 115cae55d8193567a86b992da718cf5d 462 Pfam PF00557 Metallopeptidase family M24 185 434 2.3E-62 T 23-04-2016 IPR000994 Peptidase M24, structural domain RBRH_RS10635 115cae55d8193567a86b992da718cf5d 462 Gene3D G3DSA:3.90.230.10 183 457 9.2E-81 T 23-04-2016 IPR000994 Peptidase M24, structural domain RBRH_RS10635 115cae55d8193567a86b992da718cf5d 462 SUPERFAMILY SSF53092 7 178 1.55E-42 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RBRH_RS10635 115cae55d8193567a86b992da718cf5d 462 SUPERFAMILY SSF55920 179 457 8.37E-81 T 23-04-2016 IPR000994 Peptidase M24, structural domain RBRH_RS10635 115cae55d8193567a86b992da718cf5d 462 Pfam PF05195 Aminopeptidase P, N-terminal domain 11 129 1.5E-30 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RBRH_RS10635 115cae55d8193567a86b992da718cf5d 462 Gene3D G3DSA:3.40.350.10 9 182 9.7E-46 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RBRH_RS10635 115cae55d8193567a86b992da718cf5d 462 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 356 368 - T 23-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RBRH_RS08150 2ee6e3b42ee9afe1b5262657f8bf69be 222 PANTHER PTHR22939:SF104 34 201 4.9E-35 T 23-04-2016 RBRH_RS08150 2ee6e3b42ee9afe1b5262657f8bf69be 222 PANTHER PTHR22939 34 201 4.9E-35 T 23-04-2016 RBRH_RS10285 04979a4a3b3c1873bd8b64c8ab1f9b44 158 Pfam PF02631 RecX family 37 149 5.9E-24 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RBRH_RS10285 04979a4a3b3c1873bd8b64c8ab1f9b44 158 Gene3D G3DSA:1.10.10.10 106 153 1.4E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10285 04979a4a3b3c1873bd8b64c8ab1f9b44 158 Gene3D G3DSA:1.10.10.10 58 94 1.1E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10285 04979a4a3b3c1873bd8b64c8ab1f9b44 158 Hamap MF_01114 Regulatory protein RecX [recX]. 9 155 12.992 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RBRH_RS10285 04979a4a3b3c1873bd8b64c8ab1f9b44 158 PANTHER PTHR33602 12 158 5.4E-21 T 23-04-2016 RBRH_RS10285 04979a4a3b3c1873bd8b64c8ab1f9b44 158 Gene3D G3DSA:1.10.10.10 11 57 1.7E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10285 04979a4a3b3c1873bd8b64c8ab1f9b44 158 PANTHER PTHR33602:SF1 12 158 5.4E-21 T 23-04-2016 RBRH_RS11365 11dcf68c882b48b2ed46822aac54d855 89 PANTHER PTHR38036:SF1 1 89 5.8E-22 T 23-04-2016 RBRH_RS11365 11dcf68c882b48b2ed46822aac54d855 89 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 89 22.543 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 RBRH_RS11365 11dcf68c882b48b2ed46822aac54d855 89 Gene3D G3DSA:3.30.70.1460 2 89 4.8E-34 T 23-04-2016 IPR027471 YbeD-like domain RBRH_RS11365 11dcf68c882b48b2ed46822aac54d855 89 ProDom PD061650 JHP0447 HP0495 CJ0253 10 89 1.0E-4 T 23-04-2016 RBRH_RS11365 11dcf68c882b48b2ed46822aac54d855 89 Pfam PF04359 Protein of unknown function (DUF493) 7 89 2.6E-32 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 RBRH_RS11365 11dcf68c882b48b2ed46822aac54d855 89 SUPERFAMILY SSF117991 1 89 9.42E-28 T 23-04-2016 IPR027471 YbeD-like domain RBRH_RS11365 11dcf68c882b48b2ed46822aac54d855 89 PANTHER PTHR38036 1 89 5.8E-22 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Gene3D G3DSA:1.10.1200.10 236 302 1.9E-28 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 ProSitePatterns PS00455 Putative AMP-binding domain signature. 925 936 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 PANTHER PTHR24095:SF43 3 1279 0.0 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 SMART SM00823 Phosphopantetheine attachment site 233 301 8.2E-4 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Pfam PF00501 AMP-binding enzyme 783 1176 6.7E-102 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Pfam PF00501 AMP-binding enzyme 6 125 7.5E-36 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Gene3D G3DSA:3.30.300.30 1170 1269 9.3E-37 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Pfam PF13193 AMP-binding enzyme C-terminal domain 133 206 2.7E-12 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Pfam PF13193 AMP-binding enzyme C-terminal domain 1184 1257 2.3E-10 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Gene3D G3DSA:3.40.50.980 776 934 1.1E-55 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 SUPERFAMILY SSF47336 225 297 9.29E-20 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 SUPERFAMILY SSF56801 740 1270 3.79E-159 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 SUPERFAMILY SSF52777 322 498 3.0E-49 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 804 1200 1.7E-138 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Gene3D G3DSA:3.30.300.30 120 235 1.4E-45 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Gene3D G3DSA:3.40.50.980 935 1086 8.1E-37 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Gene3D G3DSA:2.30.38.10 36 115 1.7E-31 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Gene3D G3DSA:2.30.38.10 1087 1166 8.9E-30 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Gene3D G3DSA:3.40.50.980 4 35 1.6E-7 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 PANTHER PTHR24095 3 1279 0.0 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 SUPERFAMILY SSF56801 5 246 7.59E-83 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 SUPERFAMILY SSF52777 504 770 9.23E-67 T 23-04-2016 RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Pfam PF00550 Phosphopantetheine attachment site 235 297 3.2E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Pfam PF00668 Condensation domain 317 617 2.4E-75 T 23-04-2016 IPR001242 Condensation domain RBRH_RS16255 22a5b2e9d88fe7ab9428399b52fc6c82 1282 Pfam PF13745 HxxPF-repeated domain 639 728 4.2E-31 T 23-04-2016 RBRH_RS14210 e15d31b5199c2b3b6e138d04476aeaee 63 Gene3D G3DSA:3.40.50.620 11 62 1.1E-4 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 16 461 7.8E-96 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 PANTHER PTHR11918 15 463 4.3E-211 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 16 461 7.0E-164 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 SUPERFAMILY SSF102114 126 388 3.01E-48 T 23-04-2016 RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 PANTHER PTHR11918:SF57 15 463 4.3E-211 T 23-04-2016 RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 Gene3D G3DSA:3.80.30.20 149 396 1.0E-67 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 Gene3D G3DSA:2.40.50.140 399 463 9.6E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 15 463 59.785 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 Pfam PF00919 Uncharacterized protein family UPF0004 16 95 5.6E-19 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 SMART SM00729 151 384 6.6E-47 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS05920 75dcee42753563b6daeb513a982b3c60 463 Pfam PF04055 Radical SAM superfamily 157 342 1.0E-29 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS11255 feb769feb9b36d6ab2135018404188be 86 Pfam PF00462 Glutaredoxin 4 64 2.8E-21 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RBRH_RS11255 feb769feb9b36d6ab2135018404188be 86 Gene3D G3DSA:3.40.30.10 2 85 8.6E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11255 feb769feb9b36d6ab2135018404188be 86 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 4.0E-33 T 23-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 RBRH_RS11255 feb769feb9b36d6ab2135018404188be 86 PANTHER PTHR10168 2 86 1.7E-26 T 23-04-2016 RBRH_RS11255 feb769feb9b36d6ab2135018404188be 86 SUPERFAMILY SSF52833 1 84 1.09E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11255 feb769feb9b36d6ab2135018404188be 86 PRINTS PR00160 Glutaredoxin signature 47 60 3.3E-16 T 23-04-2016 IPR014025 Glutaredoxin subgroup RBRH_RS11255 feb769feb9b36d6ab2135018404188be 86 PRINTS PR00160 Glutaredoxin signature 4 22 3.3E-16 T 23-04-2016 IPR014025 Glutaredoxin subgroup RBRH_RS11255 feb769feb9b36d6ab2135018404188be 86 PRINTS PR00160 Glutaredoxin signature 61 74 3.3E-16 T 23-04-2016 IPR014025 Glutaredoxin subgroup RBRH_RS11255 feb769feb9b36d6ab2135018404188be 86 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 23-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 PANTHER PTHR10804:SF87 1 192 6.2E-168 T 23-04-2016 RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 PANTHER PTHR10804:SF87 294 604 6.2E-168 T 23-04-2016 RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 PANTHER PTHR10804 1 192 6.2E-168 T 23-04-2016 RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 PANTHER PTHR10804 294 604 6.2E-168 T 23-04-2016 RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 Pfam PF16188 C-terminal region of peptidase_M24 546 606 1.8E-24 T 23-04-2016 IPR032416 Peptidase M24, C-terminal domain RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 Pfam PF01321 Creatinase/Prolidase N-terminal domain 17 153 3.1E-16 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 Pfam PF00557 Metallopeptidase family M24 322 535 2.9E-44 T 23-04-2016 IPR000994 Peptidase M24, structural domain RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 Pfam PF16189 Creatinase/Prolidase N-terminal domain 161 318 4.4E-39 T 23-04-2016 RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 SUPERFAMILY SSF55920 315 572 8.64E-52 T 23-04-2016 IPR000994 Peptidase M24, structural domain RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 SUPERFAMILY SSF53092 14 142 8.55E-13 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 Gene3D G3DSA:3.40.350.10 182 303 1.5E-9 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 Gene3D G3DSA:3.40.350.10 14 143 9.9E-19 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RBRH_RS04990 f9398fef694b53b139117c01dd204fba 606 Gene3D G3DSA:3.90.230.10 313 573 3.4E-58 T 23-04-2016 IPR000994 Peptidase M24, structural domain RBRH_RS11520 43064797ec652b5121e04390e619476d 123 Gene3D G3DSA:3.40.47.10 52 121 2.3E-26 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS11520 43064797ec652b5121e04390e619476d 123 ProSitePatterns PS00099 Thiolases active site. 104 117 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RBRH_RS11520 43064797ec652b5121e04390e619476d 123 Pfam PF02803 Thiolase, C-terminal domain 50 121 7.5E-24 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RBRH_RS11520 43064797ec652b5121e04390e619476d 123 Gene3D G3DSA:3.40.47.10 1 51 3.1E-14 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS11520 43064797ec652b5121e04390e619476d 123 PANTHER PTHR18919:SF110 51 123 1.0E-37 T 23-04-2016 RBRH_RS11520 43064797ec652b5121e04390e619476d 123 SUPERFAMILY SSF53901 1 52 4.68E-12 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS11520 43064797ec652b5121e04390e619476d 123 PANTHER PTHR18919 51 123 1.0E-37 T 23-04-2016 RBRH_RS11520 43064797ec652b5121e04390e619476d 123 SUPERFAMILY SSF53901 49 121 4.22E-23 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05085 101962fb7c91a757f7f40d79ff637c35 357 PIRSF PIRSF019422 1 357 1.8E-109 T 23-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A RBRH_RS05085 101962fb7c91a757f7f40d79ff637c35 357 SMART SM00925 119 252 4.1E-65 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 RBRH_RS05085 101962fb7c91a757f7f40d79ff637c35 357 Pfam PF03562 MltA specific insert domain 45 252 1.2E-64 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 RBRH_RS05085 101962fb7c91a757f7f40d79ff637c35 357 Gene3D G3DSA:2.40.40.10 32 139 1.2E-25 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RBRH_RS05085 101962fb7c91a757f7f40d79ff637c35 357 Gene3D G3DSA:2.40.40.10 163 356 7.8E-62 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RBRH_RS05085 101962fb7c91a757f7f40d79ff637c35 357 Pfam PF06725 3D domain 280 353 2.7E-25 T 23-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 RBRH_RS05085 101962fb7c91a757f7f40d79ff637c35 357 SUPERFAMILY SSF50685 28 356 3.45E-121 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RBRH_RS05085 101962fb7c91a757f7f40d79ff637c35 357 PANTHER PTHR30124 37 357 2.0E-100 T 23-04-2016 RBRH_RS05085 101962fb7c91a757f7f40d79ff637c35 357 PANTHER PTHR30124:SF0 37 357 2.0E-100 T 23-04-2016 RBRH_RS01550 b487ae8bc894181d42310d8ff5ae505e 290 Gene3D G3DSA:3.40.50.720 123 264 1.0E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01550 b487ae8bc894181d42310d8ff5ae505e 290 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 17 99 6.7E-23 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS01550 b487ae8bc894181d42310d8ff5ae505e 290 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 12 289 29.813 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS01550 b487ae8bc894181d42310d8ff5ae505e 290 SUPERFAMILY SSF51735 117 288 2.75E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01550 b487ae8bc894181d42310d8ff5ae505e 290 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 132 210 1.9E-9 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RBRH_RS01550 b487ae8bc894181d42310d8ff5ae505e 290 PANTHER PTHR21089 13 290 1.7E-116 T 23-04-2016 RBRH_RS01550 b487ae8bc894181d42310d8ff5ae505e 290 Gene3D G3DSA:3.40.192.10 12 122 9.1E-34 T 23-04-2016 RBRH_RS01550 b487ae8bc894181d42310d8ff5ae505e 290 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 15 289 3.4E-72 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS01550 b487ae8bc894181d42310d8ff5ae505e 290 PANTHER PTHR21089:SF2 13 290 1.7E-116 T 23-04-2016 RBRH_RS01550 b487ae8bc894181d42310d8ff5ae505e 290 SUPERFAMILY SSF53223 12 116 7.48E-28 T 23-04-2016 RBRH_RS09310 454f647fc82746c539f3cb0b913a0227 624 Gene3D G3DSA:3.40.50.300 382 612 4.8E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09310 454f647fc82746c539f3cb0b913a0227 624 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 54 621 2.5E-236 T 23-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 RBRH_RS09310 454f647fc82746c539f3cb0b913a0227 624 SUPERFAMILY SSF90123 54 368 1.22E-70 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS09310 454f647fc82746c539f3cb0b913a0227 624 Pfam PF00664 ABC transporter transmembrane region 67 339 3.8E-46 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS09310 454f647fc82746c539f3cb0b913a0227 624 Gene3D G3DSA:1.20.1560.10 54 368 4.8E-71 T 23-04-2016 RBRH_RS09310 454f647fc82746c539f3cb0b913a0227 624 ProSitePatterns PS00211 ABC transporters family signature. 520 534 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS09310 454f647fc82746c539f3cb0b913a0227 624 PANTHER PTHR24221 52 623 5.7E-210 T 23-04-2016 RBRH_RS09310 454f647fc82746c539f3cb0b913a0227 624 Pfam PF00005 ABC transporter 400 548 1.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS09310 454f647fc82746c539f3cb0b913a0227 624 SUPERFAMILY SSF52540 376 619 7.73E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09310 454f647fc82746c539f3cb0b913a0227 624 SMART SM00382 409 594 7.2E-21 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS06005 7a985d37405e8f42e8b10b736236c491 336 PANTHER PTHR11101 1 333 4.4E-100 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RBRH_RS06005 7a985d37405e8f42e8b10b736236c491 336 Pfam PF01384 Phosphate transporter family 25 166 3.1E-37 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RBRH_RS06005 7a985d37405e8f42e8b10b736236c491 336 Pfam PF01384 Phosphate transporter family 171 325 4.6E-54 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RBRH_RS01595 9acf7f80d94a05a41da2f18b1d03c167 371 Gene3D G3DSA:2.30.140.10 101 141 6.8E-8 T 23-04-2016 RBRH_RS01595 9acf7f80d94a05a41da2f18b1d03c167 371 Pfam PF01564 Spermine/spermidine synthase 107 321 9.7E-43 T 23-04-2016 RBRH_RS01595 9acf7f80d94a05a41da2f18b1d03c167 371 SUPERFAMILY SSF53335 98 359 4.43E-64 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01595 9acf7f80d94a05a41da2f18b1d03c167 371 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 79 371 28.219 T 23-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 RBRH_RS01595 9acf7f80d94a05a41da2f18b1d03c167 371 Gene3D G3DSA:3.40.50.150 142 360 1.9E-58 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01595 9acf7f80d94a05a41da2f18b1d03c167 371 PANTHER PTHR11558 114 360 2.6E-69 T 23-04-2016 RBRH_RS09600 76a295b052f8e40fb3d3c74719c79aa1 488 PANTHER PTHR10788:SF6 1 465 3.5E-176 T 23-04-2016 RBRH_RS09600 76a295b052f8e40fb3d3c74719c79aa1 488 Gene3D G3DSA:3.40.50.2000 240 437 3.1E-76 T 23-04-2016 RBRH_RS09600 76a295b052f8e40fb3d3c74719c79aa1 488 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 1.7E-176 T 23-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 RBRH_RS09600 76a295b052f8e40fb3d3c74719c79aa1 488 SUPERFAMILY SSF53756 2 456 2.45E-145 T 23-04-2016 RBRH_RS09600 76a295b052f8e40fb3d3c74719c79aa1 488 Gene3D G3DSA:3.40.50.2000 1 239 5.4E-70 T 23-04-2016 RBRH_RS09600 76a295b052f8e40fb3d3c74719c79aa1 488 PANTHER PTHR10788 1 465 3.5E-176 T 23-04-2016 RBRH_RS09600 76a295b052f8e40fb3d3c74719c79aa1 488 Pfam PF00982 Glycosyltransferase family 20 20 453 5.3E-131 T 23-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 RBRH_RS08140 0f88060460601c646a9b033e408060c2 206 Pfam PF13649 Methyltransferase domain 23 102 6.7E-8 T 23-04-2016 RBRH_RS08140 0f88060460601c646a9b033e408060c2 206 Gene3D G3DSA:3.40.50.150 9 169 1.8E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS08140 0f88060460601c646a9b033e408060c2 206 SUPERFAMILY SSF53335 7 173 2.29E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS06110 044921c3c89b16561681071e776027ea 826 Pfam PF06733 DEAD_2 339 457 1.7E-12 T 23-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 RBRH_RS06110 044921c3c89b16561681071e776027ea 826 Gene3D G3DSA:3.40.50.300 777 807 1.4E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06110 044921c3c89b16561681071e776027ea 826 Gene3D G3DSA:3.40.50.300 649 745 1.4E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06110 044921c3c89b16561681071e776027ea 826 SMART SM00488 174 484 5.8E-5 T 23-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 RBRH_RS06110 044921c3c89b16561681071e776027ea 826 Pfam PF13307 Helicase C-terminal domain 659 819 2.5E-30 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RBRH_RS06110 044921c3c89b16561681071e776027ea 826 SMART SM00491 672 807 1.8E-15 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RBRH_RS06110 044921c3c89b16561681071e776027ea 826 SUPERFAMILY SSF52540 630 802 2.22E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06110 044921c3c89b16561681071e776027ea 826 SUPERFAMILY SSF52540 385 458 2.22E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06110 044921c3c89b16561681071e776027ea 826 SUPERFAMILY SSF52540 200 255 2.22E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06110 044921c3c89b16561681071e776027ea 826 SUPERFAMILY SSF52540 587 601 2.22E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06110 044921c3c89b16561681071e776027ea 826 Gene3D G3DSA:3.40.50.300 400 465 6.5E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06110 044921c3c89b16561681071e776027ea 826 Gene3D G3DSA:3.40.50.300 589 611 6.5E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06110 044921c3c89b16561681071e776027ea 826 Gene3D G3DSA:3.40.50.300 178 305 6.5E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06110 044921c3c89b16561681071e776027ea 826 PANTHER PTHR11472 322 819 2.0E-67 T 23-04-2016 RBRH_RS06110 044921c3c89b16561681071e776027ea 826 PANTHER PTHR11472 179 256 2.0E-67 T 23-04-2016 RBRH_RS06670 10ff5b512fba1b9f6f0e2a84ad7825fb 422 SUPERFAMILY SSF103473 17 410 2.35E-46 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS06670 10ff5b512fba1b9f6f0e2a84ad7825fb 422 Pfam PF07690 Major Facilitator Superfamily 20 300 2.5E-29 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS06670 10ff5b512fba1b9f6f0e2a84ad7825fb 422 PANTHER PTHR23539:SF1 1 415 1.3E-79 T 23-04-2016 RBRH_RS06670 10ff5b512fba1b9f6f0e2a84ad7825fb 422 Gene3D G3DSA:1.20.1250.20 215 409 9.5E-25 T 23-04-2016 RBRH_RS06670 10ff5b512fba1b9f6f0e2a84ad7825fb 422 Gene3D G3DSA:1.20.1250.20 14 191 1.3E-21 T 23-04-2016 RBRH_RS06670 10ff5b512fba1b9f6f0e2a84ad7825fb 422 PANTHER PTHR23539 1 415 1.3E-79 T 23-04-2016 RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 SUPERFAMILY SSF52518 480 708 5.89E-96 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 Gene3D G3DSA:3.40.50.970 66 474 2.4E-155 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PIRSF PIRSF000156 6 899 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 123 302 1.0E-8 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 Gene3D G3DSA:3.40.50.970 480 712 8.2E-118 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 SUPERFAMILY SSF52518 66 472 6.3E-136 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PANTHER PTHR11624 488 543 0.0 T 23-04-2016 IPR033247 Transketolase family RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PANTHER PTHR11624 369 458 0.0 T 23-04-2016 IPR033247 Transketolase family RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PANTHER PTHR11624 83 301 0.0 T 23-04-2016 IPR033247 Transketolase family RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PANTHER PTHR11624 798 881 0.0 T 23-04-2016 IPR033247 Transketolase family RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PANTHER PTHR11624 561 779 0.0 T 23-04-2016 IPR033247 Transketolase family RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 15 898 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 Gene3D G3DSA:3.40.50.920 717 898 8.8E-76 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PANTHER PTHR11624:SF67 488 543 0.0 T 23-04-2016 RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PANTHER PTHR11624:SF67 369 458 0.0 T 23-04-2016 RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PANTHER PTHR11624:SF67 83 301 0.0 T 23-04-2016 RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PANTHER PTHR11624:SF67 798 881 0.0 T 23-04-2016 RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 PANTHER PTHR11624:SF67 561 779 0.0 T 23-04-2016 RBRH_RS08350 20d8dc06338e8fd64f855be761a37325 899 SUPERFAMILY SSF52922 713 898 2.76E-57 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 46.947 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 23-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 SUPERFAMILY SSF53098 1 153 1.38E-52 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 Gene3D G3DSA:3.30.420.10 1 153 1.3E-63 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 9.1E-32 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 9.1E-32 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 9.1E-32 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 9.1E-32 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 9.1E-32 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 152 1.1E-51 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 2.2E-51 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RBRH_RS10660 439a190bbc68cce3df4e6ed37a807412 180 PANTHER PTHR30194 1 168 9.5E-59 T 23-04-2016 RBRH_RS01465 3284f749f4e0d20279006f4c29af676b 242 SMART SM00644 71 219 1.2E-47 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RBRH_RS01465 3284f749f4e0d20279006f4c29af676b 242 PANTHER PTHR30417:SF4 61 233 6.4E-61 T 23-04-2016 RBRH_RS01465 3284f749f4e0d20279006f4c29af676b 242 PANTHER PTHR30417 61 233 6.4E-61 T 23-04-2016 RBRH_RS01465 3284f749f4e0d20279006f4c29af676b 242 SUPERFAMILY SSF55846 61 232 3.6E-61 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RBRH_RS01465 3284f749f4e0d20279006f4c29af676b 242 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 84 220 1.3E-19 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RBRH_RS01465 3284f749f4e0d20279006f4c29af676b 242 Gene3D G3DSA:3.40.80.10 61 231 1.8E-65 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 PANTHER PTHR10359:SF1 1 152 2.2E-80 T 23-04-2016 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 PANTHER PTHR10359:SF1 174 337 2.2E-80 T 23-04-2016 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 Pfam PF00633 Helix-hairpin-helix motif 79 107 8.0E-9 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 PANTHER PTHR10359 1 152 2.2E-80 T 23-04-2016 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 PANTHER PTHR10359 174 337 2.2E-80 T 23-04-2016 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 SUPERFAMILY SSF48150 1 153 3.45E-65 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 SUPERFAMILY SSF48150 181 230 3.45E-65 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 SMART SM00478 18 196 2.4E-40 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 Gene3D G3DSA:1.10.340.30 1 101 4.3E-45 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 SUPERFAMILY SSF55811 226 353 3.64E-24 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 15 146 1.8E-20 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 Gene3D G3DSA:3.90.79.10 236 354 3.4E-22 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 Gene3D G3DSA:1.10.1670.10 102 229 3.0E-34 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 ProSitePatterns PS01155 Endonuclease III family signature. 81 110 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 RBRH_RS11045 f23547148a3eadb2d70dd0570808a281 358 Pfam PF14815 NUDIX domain 240 351 9.3E-23 T 23-04-2016 IPR029119 MutY, C-terminal RBRH_RS05860 69f4418d0c45ada732e43a7c88cb9f26 631 Pfam PF02705 K+ potassium transporter 20 552 9.3E-211 T 23-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 RBRH_RS05860 69f4418d0c45ada732e43a7c88cb9f26 631 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 11 631 34.754 T 23-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup RBRH_RS05860 69f4418d0c45ada732e43a7c88cb9f26 631 PANTHER PTHR30540 22 555 2.5E-233 T 23-04-2016 RBRH_RS05860 69f4418d0c45ada732e43a7c88cb9f26 631 PANTHER PTHR30540:SF7 22 555 2.5E-233 T 23-04-2016 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 498 32.838 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 Pfam PF08245 Mur ligase middle domain 114 319 5.9E-49 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 SUPERFAMILY SSF53244 340 500 3.79E-44 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 Gene3D G3DSA:3.90.190.20 344 491 7.1E-53 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 Pfam PF02875 Mur ligase family, glutamate ligase domain 340 431 7.4E-23 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 Gene3D G3DSA:3.40.1390.10 30 103 4.6E-17 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 Gene3D G3DSA:3.40.1190.10 105 343 1.9E-82 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 SUPERFAMILY SSF63418 29 105 1.44E-13 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 PANTHER PTHR23135:SF4 16 509 4.8E-168 T 23-04-2016 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 SUPERFAMILY SSF53623 105 339 9.81E-75 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 PANTHER PTHR23135 16 509 4.8E-168 T 23-04-2016 RBRH_RS01265 2244c087cdbc63c56eff2da94031777a 510 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 31 497 1.8E-144 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RBRH_RS01155 a9838ab9b09dbae4457bb76ab8850326 204 SUPERFAMILY SSF46689 2 77 4.98E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS01155 a9838ab9b09dbae4457bb76ab8850326 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 1.1E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS01155 a9838ab9b09dbae4457bb76ab8850326 204 SUPERFAMILY SSF48498 92 199 5.34E-9 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RBRH_RS01155 a9838ab9b09dbae4457bb76ab8850326 204 Gene3D G3DSA:1.10.357.10 63 200 1.1E-39 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RBRH_RS01155 a9838ab9b09dbae4457bb76ab8850326 204 Gene3D G3DSA:1.10.10.60 2 62 7.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS01155 a9838ab9b09dbae4457bb76ab8850326 204 PANTHER PTHR30055 2 198 1.1E-16 T 23-04-2016 RBRH_RS01155 a9838ab9b09dbae4457bb76ab8850326 204 PANTHER PTHR30055:SF57 2 198 1.1E-16 T 23-04-2016 RBRH_RS01155 a9838ab9b09dbae4457bb76ab8850326 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 8.6E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS01155 a9838ab9b09dbae4457bb76ab8850326 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 8.6E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS06600 9805969d6c47448c903f5c598b4da77f 302 PANTHER PTHR11019 1 288 1.5E-104 T 23-04-2016 RBRH_RS06600 9805969d6c47448c903f5c598b4da77f 302 Gene3D G3DSA:1.10.10.60 235 277 1.3E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS06600 9805969d6c47448c903f5c598b4da77f 302 SMART SM00342 197 281 1.8E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RBRH_RS06600 9805969d6c47448c903f5c598b4da77f 302 SUPERFAMILY SSF46689 181 231 3.51E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS06600 9805969d6c47448c903f5c598b4da77f 302 SUPERFAMILY SSF46689 234 284 3.67E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS06600 9805969d6c47448c903f5c598b4da77f 302 Pfam PF06719 AraC-type transcriptional regulator N-terminus 19 168 2.8E-46 T 23-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal RBRH_RS06600 9805969d6c47448c903f5c598b4da77f 302 Pfam PF12833 Helix-turn-helix domain 203 277 2.4E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RBRH_RS06600 9805969d6c47448c903f5c598b4da77f 302 Gene3D G3DSA:1.10.10.60 181 234 1.1E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS06600 9805969d6c47448c903f5c598b4da77f 302 PANTHER PTHR11019:SF134 1 288 1.5E-104 T 23-04-2016 RBRH_RS10650 a466c0d498f6102732a028b9ea0eac5e 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 57 77 6.12E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS10650 a466c0d498f6102732a028b9ea0eac5e 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 40 57 6.12E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS10650 a466c0d498f6102732a028b9ea0eac5e 77 PANTHER PTHR32071 10 76 1.1E-16 T 23-04-2016 RBRH_RS10650 a466c0d498f6102732a028b9ea0eac5e 77 Pfam PF02954 Bacterial regulatory protein, Fis family 37 74 2.0E-15 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS10650 a466c0d498f6102732a028b9ea0eac5e 77 PIRSF PIRSF002097 1 77 7.2E-33 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RBRH_RS10650 a466c0d498f6102732a028b9ea0eac5e 77 SUPERFAMILY SSF46689 10 76 3.41E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS10650 a466c0d498f6102732a028b9ea0eac5e 77 Gene3D G3DSA:1.10.10.60 6 76 3.6E-25 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 8.0E-92 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 PANTHER PTHR11760 2 244 1.7E-128 T 23-04-2016 RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 SMART SM00322 60 125 1.5E-7 T 23-04-2016 IPR004087 K Homology domain GO:0003676 RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 Gene3D G3DSA:3.30.1140.32 108 206 1.5E-45 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 Pfam PF07650 KH domain 39 110 1.3E-20 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.4E-40 T 23-04-2016 RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 SUPERFAMILY SSF54814 2 106 6.02E-36 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 Gene3D G3DSA:3.30.300.20 17 107 8.0E-31 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 SUPERFAMILY SSF54821 108 206 2.35E-39 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.371 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RBRH_RS04425 f2c0360cc03390b0cba54dd520759f82 267 PANTHER PTHR11760:SF19 2 244 1.7E-128 T 23-04-2016 RBRH_RS11900 9f6e9bad86295404ceceb1187b9b96e0 267 Pfam PF04340 Protein of unknown function, DUF484 2 174 5.3E-17 T 23-04-2016 IPR007435 Protein of unknown function DUF484 RBRH_RS11900 9f6e9bad86295404ceceb1187b9b96e0 267 Pfam PF04340 Protein of unknown function, DUF484 206 263 5.7E-6 T 23-04-2016 IPR007435 Protein of unknown function DUF484 RBRH_RS11900 9f6e9bad86295404ceceb1187b9b96e0 267 SUPERFAMILY SSF55781 195 266 2.45E-5 T 23-04-2016 IPR029016 GAF domain-like RBRH_RS11900 9f6e9bad86295404ceceb1187b9b96e0 267 SUPERFAMILY SSF55781 89 164 2.45E-5 T 23-04-2016 IPR029016 GAF domain-like RBRH_RS11900 9f6e9bad86295404ceceb1187b9b96e0 267 PANTHER PTHR38765 1 178 4.9E-16 T 23-04-2016 RBRH_RS11900 9f6e9bad86295404ceceb1187b9b96e0 267 Gene3D G3DSA:3.30.450.40 74 266 1.0E-5 T 23-04-2016 IPR029016 GAF domain-like RBRH_RS09550 27524176f3d54e4266efe499172fa67e 60 PRINTS PR00163 Rubredoxin signature 39 55 4.8E-7 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RBRH_RS09550 27524176f3d54e4266efe499172fa67e 60 PRINTS PR00163 Rubredoxin signature 9 25 4.8E-7 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RBRH_RS09550 27524176f3d54e4266efe499172fa67e 60 SUPERFAMILY SSF57802 5 59 6.9E-22 T 23-04-2016 RBRH_RS09550 27524176f3d54e4266efe499172fa67e 60 Gene3D G3DSA:2.20.28.10 5 59 3.3E-25 T 23-04-2016 IPR004039 Rubredoxin-type fold RBRH_RS09550 27524176f3d54e4266efe499172fa67e 60 PIRSF PIRSF000071 6 60 1.4E-22 T 23-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 RBRH_RS09550 27524176f3d54e4266efe499172fa67e 60 ProSitePatterns PS00202 Rubredoxin signature. 39 49 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RBRH_RS09550 27524176f3d54e4266efe499172fa67e 60 Pfam PF00301 Rubredoxin 10 55 2.0E-22 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 RBRH_RS06125 c8ed6413d55ce330d9675d4b0c7d1c49 263 PANTHER PTHR10992:SF861 11 261 9.5E-80 T 23-04-2016 RBRH_RS06125 c8ed6413d55ce330d9675d4b0c7d1c49 263 Gene3D G3DSA:3.40.50.1820 1 261 2.1E-70 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS06125 c8ed6413d55ce330d9675d4b0c7d1c49 263 Pfam PF00561 alpha/beta hydrolase fold 24 246 1.8E-21 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RBRH_RS06125 c8ed6413d55ce330d9675d4b0c7d1c49 263 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 260 1.7E-101 T 23-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 RBRH_RS06125 c8ed6413d55ce330d9675d4b0c7d1c49 263 SUPERFAMILY SSF53474 1 260 8.66E-70 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS06125 c8ed6413d55ce330d9675d4b0c7d1c49 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 9.4E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RBRH_RS06125 c8ed6413d55ce330d9675d4b0c7d1c49 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 9.4E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RBRH_RS06125 c8ed6413d55ce330d9675d4b0c7d1c49 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 9.4E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RBRH_RS06125 c8ed6413d55ce330d9675d4b0c7d1c49 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 9.4E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RBRH_RS06125 c8ed6413d55ce330d9675d4b0c7d1c49 263 PANTHER PTHR10992 11 261 9.5E-80 T 23-04-2016 RBRH_RS09480 c83802620e54dd62729dd6ce56c4c76b 133 Gene3D G3DSA:1.10.260.40 74 125 3.2E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS09480 c83802620e54dd62729dd6ce56c4c76b 133 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 3 130 4.4E-45 T 23-04-2016 IPR022452 Antitoxin MqsA RBRH_RS09480 c83802620e54dd62729dd6ce56c4c76b 133 PANTHER PTHR36511 58 131 1.4E-26 T 23-04-2016 RBRH_RS09480 c83802620e54dd62729dd6ce56c4c76b 133 PANTHER PTHR36511 2 30 1.4E-26 T 23-04-2016 RBRH_RS09480 c83802620e54dd62729dd6ce56c4c76b 133 SUPERFAMILY SSF47413 73 127 4.86E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS09480 c83802620e54dd62729dd6ce56c4c76b 133 SMART SM00530 73 127 6.4E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RBRH_RS09480 c83802620e54dd62729dd6ce56c4c76b 133 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 48 1.1E-14 T 23-04-2016 IPR022453 Zinc finger, MqsA-type RBRH_RS09480 c83802620e54dd62729dd6ce56c4c76b 133 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 1 131 4.4E-65 T 23-04-2016 IPR032758 Antitoxin MqsA/igA-2 RBRH_RS09480 c83802620e54dd62729dd6ce56c4c76b 133 PANTHER PTHR36511:SF3 58 131 1.4E-26 T 23-04-2016 RBRH_RS09480 c83802620e54dd62729dd6ce56c4c76b 133 PANTHER PTHR36511:SF3 2 30 1.4E-26 T 23-04-2016 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 PRINTS PR00045 Sigma-54 factor signature 478 496 5.6E-27 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 PRINTS PR00045 Sigma-54 factor signature 215 232 5.6E-27 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 PRINTS PR00045 Sigma-54 factor signature 420 431 5.6E-27 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 PRINTS PR00045 Sigma-54 factor signature 404 416 5.6E-27 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 Pfam PF04552 Sigma-54, DNA binding domain 347 502 1.2E-65 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 502 3.1E-141 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 PANTHER PTHR32248 1 57 1.1E-146 T 23-04-2016 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 PANTHER PTHR32248 77 504 1.1E-146 T 23-04-2016 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 PIRSF PIRSF000774 1 504 6.0E-153 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 Pfam PF04963 Sigma-54 factor, core binding domain 141 331 8.3E-58 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 392 411 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 PANTHER PTHR32248:SF4 1 57 1.1E-146 T 23-04-2016 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 PANTHER PTHR32248:SF4 77 504 1.1E-146 T 23-04-2016 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 7.4E-15 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11015 ac9d5bc1e34279a6ee3b724ea51f730c 504 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 483 490 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS08580 e8da31b9bcd49a10a8aefc1280dd5185 169 PRINTS PR01021 OMPA domain signature 98 113 1.1E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RBRH_RS08580 e8da31b9bcd49a10a8aefc1280dd5185 169 PRINTS PR01021 OMPA domain signature 113 129 1.1E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RBRH_RS08580 e8da31b9bcd49a10a8aefc1280dd5185 169 PRINTS PR01021 OMPA domain signature 68 90 1.1E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RBRH_RS08580 e8da31b9bcd49a10a8aefc1280dd5185 169 SUPERFAMILY SSF103088 46 167 5.49E-34 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS08580 e8da31b9bcd49a10a8aefc1280dd5185 169 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RBRH_RS08580 e8da31b9bcd49a10a8aefc1280dd5185 169 Gene3D G3DSA:3.30.1330.60 60 167 2.6E-33 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS08580 e8da31b9bcd49a10a8aefc1280dd5185 169 PANTHER PTHR30128 64 169 4.2E-47 T 23-04-2016 RBRH_RS08580 e8da31b9bcd49a10a8aefc1280dd5185 169 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 65 168 1.6E-44 T 23-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 RBRH_RS08580 e8da31b9bcd49a10a8aefc1280dd5185 169 Pfam PF00691 OmpA family 67 162 4.2E-20 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS08580 e8da31b9bcd49a10a8aefc1280dd5185 169 PANTHER PTHR30128:SF18 64 169 4.2E-47 T 23-04-2016 RBRH_RS02480 57196b0a08444cf9a6357f709a2dd09b 155 Gene3D G3DSA:3.10.590.10 1 150 7.1E-31 T 23-04-2016 IPR002740 EVE domain RBRH_RS02480 57196b0a08444cf9a6357f709a2dd09b 155 Pfam PF01878 EVE domain 3 148 5.0E-53 T 23-04-2016 IPR002740 EVE domain RBRH_RS02480 57196b0a08444cf9a6357f709a2dd09b 155 PANTHER PTHR14087 1 147 1.0E-74 T 23-04-2016 RBRH_RS02480 57196b0a08444cf9a6357f709a2dd09b 155 SUPERFAMILY SSF88697 1 150 3.23E-59 T 23-04-2016 IPR015947 PUA-like domain RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 SUPERFAMILY SSF53383 159 614 2.14E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 PANTHER PTHR11751:SF406 160 505 1.6E-141 T 23-04-2016 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 PANTHER PTHR11751:SF406 558 681 1.6E-141 T 23-04-2016 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 PANTHER PTHR11751:SF406 533 541 1.6E-141 T 23-04-2016 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 Gene3D G3DSA:3.90.100.10 638 760 2.7E-33 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 621 746 7.8E-46 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 PANTHER PTHR11751 160 505 1.6E-141 T 23-04-2016 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 PANTHER PTHR11751 558 681 1.6E-141 T 23-04-2016 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 PANTHER PTHR11751 533 541 1.6E-141 T 23-04-2016 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 159 594 9.1E-154 T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 PIRSF PIRSF009393 1 761 1.4E-280 T 23-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 Gene3D G3DSA:3.40.640.10 159 467 5.1E-110 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 153 3.7E-38 T 23-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 403 417 - T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 SUPERFAMILY SSF55904 616 760 2.62E-45 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RBRH_RS02590 ac30961d1c53b1adad7c4ae5c39ee97c 761 Gene3D G3DSA:3.90.1150.10 470 637 6.4E-71 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 388 400 4.983419E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 358 364 4.983419E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 112 124 4.983419E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 4.983419E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 67 79 4.983419E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 61 4.983419E-24 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 Pfam PF01266 FAD dependent oxidoreductase 39 391 7.7E-42 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 SUPERFAMILY SSF51905 37 339 2.46E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 PANTHER PTHR11985 26 550 8.9E-147 T 23-04-2016 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 Gene3D G3DSA:3.50.50.60 36 265 2.7E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS00245 efe0e2283d49ccfcce3876c9a7bcb551 559 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 420 534 7.0E-23 T 23-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS06925 adacf9c892729df4283d54b816243a6b 640 PANTHER PTHR30267 1 640 3.7E-270 T 23-04-2016 RBRH_RS06925 adacf9c892729df4283d54b816243a6b 640 PANTHER PTHR30267:SF2 1 640 3.7E-270 T 23-04-2016 RBRH_RS06925 adacf9c892729df4283d54b816243a6b 640 Gene3D G3DSA:3.40.50.300 239 325 1.0E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06925 adacf9c892729df4283d54b816243a6b 640 Gene3D G3DSA:3.40.50.300 75 154 1.0E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06925 adacf9c892729df4283d54b816243a6b 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 2.5E-73 T 23-04-2016 IPR010650 PrkA C-terminal domain RBRH_RS06925 adacf9c892729df4283d54b816243a6b 640 Pfam PF08298 PrkA AAA domain 20 376 5.9E-171 T 23-04-2016 IPR013153 PrkA AAA domain RBRH_RS06925 adacf9c892729df4283d54b816243a6b 640 PIRSF PIRSF000549 1 640 3.8E-289 T 23-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 RBRH_RS06925 adacf9c892729df4283d54b816243a6b 640 SMART SM00763 19 376 6.8E-212 T 23-04-2016 IPR013153 PrkA AAA domain RBRH_RS06925 adacf9c892729df4283d54b816243a6b 640 SUPERFAMILY SSF52540 75 343 6.81E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11310 cab91ad1b841b35fe03fecb3da338f2d 500 Gene3D G3DSA:1.10.3430.10 96 481 4.1E-141 T 23-04-2016 IPR029020 Ammonium/urea transporter RBRH_RS11310 cab91ad1b841b35fe03fecb3da338f2d 500 TIGRFAM TIGR00836 amt: ammonium transporter 101 497 9.0E-134 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RBRH_RS11310 cab91ad1b841b35fe03fecb3da338f2d 500 Pfam PF00909 Ammonium Transporter Family 103 498 1.7E-119 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RBRH_RS11310 cab91ad1b841b35fe03fecb3da338f2d 500 ProSitePatterns PS01219 Ammonium transporters signature. 264 289 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RBRH_RS11310 cab91ad1b841b35fe03fecb3da338f2d 500 SUPERFAMILY SSF111352 97 481 3.4E-130 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RBRH_RS11310 cab91ad1b841b35fe03fecb3da338f2d 500 PANTHER PTHR11730 74 497 1.6E-183 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RBRH_RS11310 cab91ad1b841b35fe03fecb3da338f2d 500 PANTHER PTHR11730:SF17 74 497 1.6E-183 T 23-04-2016 RBRH_RS02495 997e7a7b9ff5ddf08f718ef102812548 675 SUPERFAMILY SSF56935 96 672 1.98E-104 T 23-04-2016 RBRH_RS02495 997e7a7b9ff5ddf08f718ef102812548 675 Pfam PF07715 TonB-dependent Receptor Plug Domain 114 213 4.6E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RBRH_RS02495 997e7a7b9ff5ddf08f718ef102812548 675 Gene3D G3DSA:2.170.130.10 89 220 2.3E-31 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RBRH_RS02495 997e7a7b9ff5ddf08f718ef102812548 675 Pfam PF00593 TonB dependent receptor 456 672 8.8E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RBRH_RS02495 997e7a7b9ff5ddf08f718ef102812548 675 PANTHER PTHR32552 95 674 3.2E-40 T 23-04-2016 RBRH_RS02495 997e7a7b9ff5ddf08f718ef102812548 675 Gene3D G3DSA:2.40.170.20 221 673 5.6E-79 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 Pfam PF01029 NusB family 48 147 2.5E-7 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 Pfam PF01189 16S rRNA methyltransferase RsmB/F 262 458 3.6E-48 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 29 460 5.6E-85 T 23-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 PANTHER PTHR22807:SF30 59 460 5.5E-65 T 23-04-2016 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 Gene3D G3DSA:3.30.70.1170 194 252 7.4E-20 T 23-04-2016 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 337 348 - T 23-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 PANTHER PTHR22807 59 460 5.5E-65 T 23-04-2016 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 SUPERFAMILY SSF48013 30 170 3.11E-16 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 273 283 9.3E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 244 258 9.3E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 388 404 9.3E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 442 459 9.3E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 338 350 9.3E-25 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 Gene3D G3DSA:1.10.940.10 29 171 2.5E-16 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 Gene3D G3DSA:3.40.50.150 255 459 2.6E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS12095 c4804e6b265b642b4f95375e432899a9 460 SUPERFAMILY SSF53335 157 459 5.46E-63 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01940 7f5e7ce0a6887082d4f14695f07a1036 219 Pfam PF09335 SNARE associated Golgi protein 49 177 2.8E-20 T 23-04-2016 IPR032816 SNARE associated Golgi protein RBRH_RS01940 7f5e7ce0a6887082d4f14695f07a1036 219 PANTHER PTHR30353:SF0 1 218 1.7E-72 T 23-04-2016 RBRH_RS01940 7f5e7ce0a6887082d4f14695f07a1036 219 PANTHER PTHR30353 1 218 1.7E-72 T 23-04-2016 IPR032818 DedA family RBRH_RS08750 214afbeb384b144a528b5aee46e9b126 441 PIRSF PIRSF001563 1 441 5.2E-105 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RBRH_RS08750 214afbeb384b144a528b5aee46e9b126 441 SUPERFAMILY SSF53623 5 292 8.01E-87 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS08750 214afbeb384b144a528b5aee46e9b126 441 SUPERFAMILY SSF53244 293 435 2.56E-29 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS08750 214afbeb384b144a528b5aee46e9b126 441 Gene3D G3DSA:3.40.1190.10 6 294 7.6E-93 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS08750 214afbeb384b144a528b5aee46e9b126 441 Pfam PF08245 Mur ligase middle domain 47 269 1.9E-8 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS08750 214afbeb384b144a528b5aee46e9b126 441 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 435 1.0E-99 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RBRH_RS08750 214afbeb384b144a528b5aee46e9b126 441 PANTHER PTHR11136 7 435 1.1E-114 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RBRH_RS08750 214afbeb384b144a528b5aee46e9b126 441 Gene3D G3DSA:3.90.190.20 295 436 4.2E-39 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 PANTHER PTHR21237 25 179 3.9E-54 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 PRINTS PR00773 GrpE protein signature 130 145 1.1E-26 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 PRINTS PR00773 GrpE protein signature 156 175 1.1E-26 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 PRINTS PR00773 GrpE protein signature 78 93 1.1E-26 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 PRINTS PR00773 GrpE protein signature 50 66 1.1E-26 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 SUPERFAMILY SSF58014 32 120 4.71E-24 T 23-04-2016 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 Gene3D G3DSA:3.90.20.20 27 120 8.3E-30 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 SUPERFAMILY SSF51064 123 177 1.57E-17 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 ProSitePatterns PS01071 grpE protein signature. 133 175 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 Pfam PF01025 GrpE 27 176 1.2E-48 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 Hamap MF_01151 Protein GrpE [grpE]. 2 177 19.601 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RBRH_RS01875 818c5a297f52109f696bace51cb1189a 179 Gene3D G3DSA:2.30.22.10 123 178 8.6E-25 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 PANTHER PTHR11659 2 489 4.8E-251 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 489 38.241 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 PANTHER PTHR11659:SF0 2 489 4.8E-251 T 23-04-2016 RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 488 8.0E-168 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 SUPERFAMILY SSF55931 4 303 5.56E-119 T 23-04-2016 RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 Pfam PF02637 GatB domain 336 488 5.5E-50 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 Pfam PF02934 GatB/GatE catalytic domain 5 295 3.7E-113 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 SMART SM00845 335 488 3.8E-78 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 Gene3D G3DSA:1.10.10.410 434 489 4.7E-6 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 SUPERFAMILY SSF89095 304 409 2.62E-30 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RBRH_RS11990 60d7506dd733913e8042c201ec34a85c 489 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 151 165 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 RBRH_RS01360 2721c24fa9f10825538e599d2ccc7af8 251 Pfam PF07072 Protein of unknown function (DUF1342) 16 225 2.3E-80 T 23-04-2016 IPR009777 Cell division protein ZapD RBRH_RS01360 2721c24fa9f10825538e599d2ccc7af8 251 Gene3D G3DSA:2.60.440.10 173 249 2.2E-19 T 23-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain RBRH_RS01360 2721c24fa9f10825538e599d2ccc7af8 251 PANTHER PTHR39455 2 250 8.7E-53 T 23-04-2016 RBRH_RS01360 2721c24fa9f10825538e599d2ccc7af8 251 SUPERFAMILY SSF160950 2 249 1.05E-86 T 23-04-2016 RBRH_RS01360 2721c24fa9f10825538e599d2ccc7af8 251 PANTHER PTHR39455:SF1 2 250 8.7E-53 T 23-04-2016 RBRH_RS01360 2721c24fa9f10825538e599d2ccc7af8 251 Gene3D G3DSA:1.10.3900.10 10 172 1.3E-65 T 23-04-2016 RBRH_RS01360 2721c24fa9f10825538e599d2ccc7af8 251 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 249 33.137 T 23-04-2016 IPR009777 Cell division protein ZapD RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 SUPERFAMILY SSF46785 29 107 8.97E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 Pfam PF00392 Bacterial regulatory proteins, gntR family 31 94 5.7E-22 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 Pfam PF07702 UTRA domain 119 253 5.0E-34 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 Gene3D G3DSA:3.40.1410.10 92 261 2.0E-43 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 Gene3D G3DSA:1.10.10.10 29 91 6.3E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 SMART SM00345 35 94 1.9E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 68 6.7E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 68 84 6.7E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 PANTHER PTHR11751 27 96 1.1E-22 T 23-04-2016 RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 PANTHER PTHR11751 118 132 1.1E-22 T 23-04-2016 RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 SUPERFAMILY SSF64288 83 261 4.08E-38 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RBRH_RS08840 4258b5d1611e24c4429460e7fdb51478 262 SMART SM00866 114 256 1.1E-30 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 PANTHER PTHR30203 61 474 1.5E-99 T 23-04-2016 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 474 8.3E-83 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 SUPERFAMILY SSF56954 6 38 8.63E-90 T 23-04-2016 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 SUPERFAMILY SSF56954 74 476 8.63E-90 T 23-04-2016 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 PANTHER PTHR30203:SF13 61 474 1.5E-99 T 23-04-2016 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 Pfam PF02321 Outer membrane efflux protein 294 472 1.2E-17 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 Pfam PF02321 Outer membrane efflux protein 83 264 3.0E-17 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 Gene3D G3DSA:1.20.1600.10 72 109 4.3E-82 T 23-04-2016 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 Gene3D G3DSA:1.20.1600.10 361 474 4.3E-82 T 23-04-2016 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 Gene3D G3DSA:1.20.1600.10 154 325 4.3E-82 T 23-04-2016 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 Gene3D G3DSA:2.20.200.10 131 153 1.0E-8 T 23-04-2016 RBRH_RS00155 30355ef52f28785ab9507b31fb92f228 478 Gene3D G3DSA:2.20.200.10 326 352 1.0E-8 T 23-04-2016 RBRH_RS05900 f49da5d809d40ff5fedfd2c76ef971e6 685 Gene3D G3DSA:3.40.50.1820 285 651 6.1E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS05900 f49da5d809d40ff5fedfd2c76ef971e6 685 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 190 356 3.2E-67 T 23-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- RBRH_RS05900 f49da5d809d40ff5fedfd2c76ef971e6 685 PANTHER PTHR36837 187 683 1.0E-185 T 23-04-2016 RBRH_RS05900 f49da5d809d40ff5fedfd2c76ef971e6 685 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 150 681 2.0E-211 T 23-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 RBRH_RS05900 f49da5d809d40ff5fedfd2c76ef971e6 685 SUPERFAMILY SSF53474 300 608 1.25E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS05900 f49da5d809d40ff5fedfd2c76ef971e6 685 PANTHER PTHR36837:SF2 187 683 1.0E-185 T 23-04-2016 RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 Gene3D G3DSA:3.40.50.720 1 141 2.1E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 SUPERFAMILY SSF51735 1 153 6.61E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 129 282 7.7E-65 T 23-04-2016 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 PANTHER PTHR41706 1 314 1.2E-128 T 23-04-2016 RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 SUPERFAMILY SSF55347 129 282 7.85E-67 T 23-04-2016 RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 PIRSF PIRSF015689 1 313 3.9E-133 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 117 6.5E-13 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 320 140.642 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 SMART SM00859 6 122 4.1E-12 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 4 306 2.2E-142 T 23-04-2016 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 RBRH_RS08685 48e69570f1a1b955fbcf49ddf83c6cba 320 Gene3D G3DSA:3.30.360.10 142 282 5.2E-75 T 23-04-2016 RBRH_RS03755 ef2468a156093e78f863475d046df5f2 213 Gene3D G3DSA:3.40.190.10 105 172 3.1E-12 T 23-04-2016 RBRH_RS03755 ef2468a156093e78f863475d046df5f2 213 Gene3D G3DSA:3.40.190.10 36 104 6.4E-13 T 23-04-2016 RBRH_RS03755 ef2468a156093e78f863475d046df5f2 213 PANTHER PTHR30126 38 167 2.7E-29 T 23-04-2016 RBRH_RS03755 ef2468a156093e78f863475d046df5f2 213 PANTHER PTHR30126:SF31 38 167 2.7E-29 T 23-04-2016 RBRH_RS03755 ef2468a156093e78f863475d046df5f2 213 Pfam PF03466 LysR substrate binding domain 33 172 9.9E-28 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS03755 ef2468a156093e78f863475d046df5f2 213 SUPERFAMILY SSF53850 33 179 1.3E-24 T 23-04-2016 RBRH_RS02710 5a6cebae26ced202f049433cfdea0d49 405 Pfam PF10129 OpgC protein 7 354 3.7E-81 T 23-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC RBRH_RS02710 5a6cebae26ced202f049433cfdea0d49 405 PIRSF PIRSF028704 2 373 2.6E-55 T 23-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC RBRH_RS02710 5a6cebae26ced202f049433cfdea0d49 405 PANTHER PTHR38592 4 320 6.5E-34 T 23-04-2016 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 699 814 2.1E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 SMART SM00388 585 655 6.4E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 SUPERFAMILY SSF55785 303 430 1.27E-26 T 23-04-2016 IPR000014 PAS domain RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 PANTHER PTHR24423 302 832 1.5E-82 T 23-04-2016 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 SMART SM00387 697 816 3.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 SUPERFAMILY SSF55785 429 561 2.79E-9 T 23-04-2016 IPR000014 PAS domain RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 314 439 2.3E-27 T 23-04-2016 IPR000014 PAS domain RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 Gene3D G3DSA:3.30.565.10 655 814 1.1E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 SUPERFAMILY SSF47384 580 653 2.94E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 SMART SM00086 390 432 5.5E-8 T 23-04-2016 IPR001610 PAC motif RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 Gene3D G3DSA:3.30.450.20 303 429 3.4E-25 T 23-04-2016 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 Gene3D G3DSA:3.30.450.20 430 561 8.7E-10 T 23-04-2016 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 742 756 6.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 760 770 6.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 800 813 6.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 771 789 6.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 Pfam PF13188 PAS domain 444 486 0.0075 T 23-04-2016 IPR000014 PAS domain RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 Pfam PF00512 His Kinase A (phospho-acceptor) domain 586 652 2.9E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 Pfam PF00989 PAS fold 318 429 2.2E-18 T 23-04-2016 IPR013767 PAS fold GO:0006355 RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 SMART SM00091 315 383 2.9E-7 T 23-04-2016 IPR000014 PAS domain RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 SMART SM00091 444 515 130.0 T 23-04-2016 IPR000014 PAS domain RBRH_RS08355 21228c641fa7597666043a518dbe898d 837 SUPERFAMILY SSF55874 647 814 3.01E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS11265 c841766828c18847612e35931ff46335 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 5.9E-118 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RBRH_RS11265 c841766828c18847612e35931ff46335 248 Gene3D G3DSA:3.40.50.1240 1 247 3.0E-97 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RBRH_RS11265 c841766828c18847612e35931ff46335 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.57 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RBRH_RS11265 c841766828c18847612e35931ff46335 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 23-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RBRH_RS11265 c841766828c18847612e35931ff46335 248 SMART SM00855 3 189 5.3E-28 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RBRH_RS11265 c841766828c18847612e35931ff46335 248 SUPERFAMILY SSF53254 1 245 6.15E-78 T 23-04-2016 IPR029033 Histidine phosphatase superfamily RBRH_RS11265 c841766828c18847612e35931ff46335 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 125 1.1E-28 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RBRH_RS11265 c841766828c18847612e35931ff46335 248 PANTHER PTHR11931 1 248 8.1E-163 T 23-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RBRH_RS03560 1517704b442c055f8f0cabe3c11f9e9d 270 Pfam PF08241 Methyltransferase domain 87 147 4.1E-10 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RBRH_RS03560 1517704b442c055f8f0cabe3c11f9e9d 270 Gene3D G3DSA:3.40.50.150 98 239 1.4E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS03560 1517704b442c055f8f0cabe3c11f9e9d 270 PANTHER PTHR10108:SF836 93 193 2.1E-20 T 23-04-2016 RBRH_RS03560 1517704b442c055f8f0cabe3c11f9e9d 270 PANTHER PTHR10108 93 193 2.1E-20 T 23-04-2016 RBRH_RS03560 1517704b442c055f8f0cabe3c11f9e9d 270 SUPERFAMILY SSF53335 81 239 1.82E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS08115 67bdf95e285c83bd3729b28b4b978b4c 534 PANTHER PTHR24095 8 519 7.8E-141 T 23-04-2016 RBRH_RS08115 67bdf95e285c83bd3729b28b4b978b4c 534 Gene3D G3DSA:2.30.38.10 353 427 1.2E-26 T 23-04-2016 RBRH_RS08115 67bdf95e285c83bd3729b28b4b978b4c 534 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 519 1.6E-11 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08115 67bdf95e285c83bd3729b28b4b978b4c 534 SUPERFAMILY SSF56801 18 528 2.22E-134 T 23-04-2016 RBRH_RS08115 67bdf95e285c83bd3729b28b4b978b4c 534 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08115 67bdf95e285c83bd3729b28b4b978b4c 534 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 44 462 1.7E-110 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08115 67bdf95e285c83bd3729b28b4b978b4c 534 Gene3D G3DSA:3.40.50.980 188 343 1.8E-36 T 23-04-2016 RBRH_RS08115 67bdf95e285c83bd3729b28b4b978b4c 534 Pfam PF00501 AMP-binding enzyme 24 437 2.2E-96 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08115 67bdf95e285c83bd3729b28b4b978b4c 534 Gene3D G3DSA:3.40.50.980 19 187 2.9E-39 T 23-04-2016 RBRH_RS08115 67bdf95e285c83bd3729b28b4b978b4c 534 Gene3D G3DSA:3.30.300.30 432 529 1.6E-23 T 23-04-2016 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 Pfam PF13411 MerR HTH family regulatory protein 1 69 5.4E-19 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 SMART SM00422 1 70 6.0E-26 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 Gene3D G3DSA:1.10.1660.10 1 55 1.6E-24 T 23-04-2016 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.9E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.9E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.9E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 PANTHER PTHR30204 1 114 8.0E-44 T 23-04-2016 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 SUPERFAMILY SSF46955 1 125 6.59E-34 T 23-04-2016 IPR009061 Putative DNA-binding domain RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 Gene3D G3DSA:1.10.1660.10 56 133 2.1E-26 T 23-04-2016 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 PANTHER PTHR30204:SF18 1 114 8.0E-44 T 23-04-2016 RBRH_RS06655 44709ccccfa6febb3af4883d9c5203ce 143 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 2.8E-50 T 23-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 Gene3D G3DSA:3.40.50.720 1 210 4.4E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 PIRSF PIRSF500134 1 454 1.5E-188 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 PANTHER PTHR11374 1 456 8.1E-250 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 435 3.2E-30 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 184 8.2E-66 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 SUPERFAMILY SSF52413 309 446 1.83E-38 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 300 1.6E-37 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 Gene3D G3DSA:3.40.50.720 239 454 1.4E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 SMART SM00984 324 436 4.5E-50 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 432 1.9E-135 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 SUPERFAMILY SSF51735 1 197 2.67E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 PANTHER PTHR11374:SF18 1 456 8.1E-250 T 23-04-2016 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 SUPERFAMILY SSF48179 208 302 3.57E-33 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 PIRSF PIRSF000124 1 451 4.7E-152 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RBRH_RS02990 5413ea1dcbe2a107f95b51340836975b 466 Gene3D G3DSA:1.20.5.100 211 238 1.0E-17 T 23-04-2016 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.294 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 PANTHER PTHR11451:SF31 1 635 0.0 T 23-04-2016 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 SUPERFAMILY SSF55681 242 525 7.66E-101 T 23-04-2016 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 PANTHER PTHR11451 1 635 0.0 T 23-04-2016 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 6.3E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 6.3E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 6.3E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 6.3E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 6.3E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Pfam PF02824 TGS domain 3 61 5.7E-10 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 SMART SM00863 169 218 1.9E-23 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Gene3D G3DSA:3.40.50.800 530 632 4.3E-31 T 23-04-2016 IPR004154 Anticodon-binding RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 SUPERFAMILY SSF55186 63 240 1.83E-69 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Gene3D G3DSA:3.10.20.30 1 64 3.8E-22 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 5.3E-42 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 SUPERFAMILY SSF52954 529 631 6.49E-27 T 23-04-2016 IPR004154 Anticodon-binding RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Pfam PF03129 Anticodon binding domain 540 628 2.1E-17 T 23-04-2016 IPR004154 Anticodon-binding RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 5.0E-222 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 218 2.0E-14 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Gene3D G3DSA:3.30.930.10 241 529 7.6E-121 T 23-04-2016 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 SUPERFAMILY SSF81271 2 61 3.27E-15 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Gene3D G3DSA:3.30.980.10 66 129 1.4E-41 T 23-04-2016 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Gene3D G3DSA:3.30.980.10 187 223 1.4E-41 T 23-04-2016 RBRH_RS05300 0966a6b48cfd3af775c0970cf71e9ada 635 Gene3D G3DSA:3.30.54.20 130 186 8.9E-24 T 23-04-2016 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 SUPERFAMILY SSF52151 12 142 1.91E-45 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 SUPERFAMILY SSF52151 208 307 1.91E-45 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 Gene3D G3DSA:3.30.70.250 500 567 1.7E-17 T 23-04-2016 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 Gene3D G3DSA:3.30.70.250 141 196 1.8E-5 T 23-04-2016 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 PANTHER PTHR10982 380 655 3.2E-105 T 23-04-2016 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 SUPERFAMILY SSF52151 384 498 1.28E-63 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 SUPERFAMILY SSF52151 561 659 1.28E-63 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 Gene3D G3DSA:3.40.366.10 378 498 1.4E-61 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 Gene3D G3DSA:3.40.366.10 568 660 1.4E-61 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 Gene3D G3DSA:3.40.366.10 8 137 1.0E-52 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 Gene3D G3DSA:3.40.366.10 207 311 1.0E-52 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 SUPERFAMILY SSF55048 502 568 7.59E-14 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 SUPERFAMILY SSF55048 144 206 5.62E-7 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 384 659 2.0E-98 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 386 665 2.1E-40 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 15 317 3.1E-42 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 Pfam PF00698 Acyl transferase domain 384 618 8.3E-32 T 23-04-2016 IPR014043 Acyl transferase RBRH_RS07350 dfe64d0aee2860f6f7ca5e6751eeb7e4 665 Pfam PF00698 Acyl transferase domain 13 328 4.5E-31 T 23-04-2016 IPR014043 Acyl transferase RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 ProSitePatterns PS01135 FtsZ protein signature 2. 95 116 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 Gene3D G3DSA:3.30.1330.20 213 319 9.8E-43 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 171 3.6E-37 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 SUPERFAMILY SSF55307 202 317 1.33E-38 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 PANTHER PTHR30314:SF3 1 394 3.1E-162 T 23-04-2016 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 PANTHER PTHR30314 1 394 3.1E-162 T 23-04-2016 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 SUPERFAMILY SSF52490 15 206 2.75E-64 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 381 35.382 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 Gene3D G3DSA:3.40.50.1440 15 212 6.4E-86 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 Pfam PF12327 FtsZ family, C-terminal domain 220 314 3.8E-30 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 5 324 2.1E-118 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 SMART SM00864 14 203 1.9E-105 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 SMART SM00865 205 323 2.4E-50 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 PRINTS PR00423 Cell division protein FtsZ signature 96 116 2.7E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 PRINTS PR00423 Cell division protein FtsZ signature 187 209 2.7E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 PRINTS PR00423 Cell division protein FtsZ signature 124 145 2.7E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RBRH_RS01315 4797ccb322373400085c5a15a7737ed3 396 PRINTS PR00423 Cell division protein FtsZ signature 210 231 2.7E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 Gene3D G3DSA:3.40.1160.10 4 261 1.6E-57 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 PIRSF PIRSF000729 4 372 4.8E-130 T 23-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 PANTHER PTHR11063 1 372 4.8E-115 T 23-04-2016 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 Gene3D G3DSA:2.30.130.10 278 370 1.4E-27 T 23-04-2016 IPR015947 PUA-like domain RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 1.6E-132 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 PANTHER PTHR11063:SF6 1 372 4.8E-115 T 23-04-2016 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 1.2E-49 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 1.2E-49 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 1.2E-49 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 1.2E-49 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 1.2E-49 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 Pfam PF00696 Amino acid kinase family 9 238 3.6E-42 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 35.79 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 SMART SM00359 281 364 7.2E-15 T 23-04-2016 IPR002478 PUA domain GO:0003723 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 SUPERFAMILY SSF88697 281 371 9.94E-24 T 23-04-2016 IPR015947 PUA-like domain RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 23-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 Pfam PF01472 PUA domain 281 355 1.0E-22 T 23-04-2016 IPR002478 PUA domain GO:0003723 RBRH_RS01420 dd968b02c9523412294f4562136b38dd 372 SUPERFAMILY SSF53633 9 259 1.1E-68 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 591 3.2E-281 T 23-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 23-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 SUPERFAMILY SSF46977 456 591 5.76E-45 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 Pfam PF02910 Fumarate reductase flavoprotein C-term 465 590 2.5E-39 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 Gene3D G3DSA:3.50.50.60 8 247 4.9E-119 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 Gene3D G3DSA:3.50.50.60 355 430 4.9E-119 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 7.6E-6 T 23-04-2016 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 393 7.6E-6 T 23-04-2016 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 Gene3D G3DSA:4.10.80.40 560 591 8.9E-23 T 23-04-2016 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 SUPERFAMILY SSF51905 363 435 3.6E-78 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 SUPERFAMILY SSF51905 9 264 3.6E-78 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 SUPERFAMILY SSF56425 241 359 8.37E-44 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 Gene3D G3DSA:3.90.700.10 248 354 1.9E-42 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 PANTHER PTHR11632:SF5 1 586 0.0 T 23-04-2016 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 PIRSF PIRSF000171 3 578 6.8E-41 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 PANTHER PTHR11632 1 586 0.0 T 23-04-2016 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 Gene3D G3DSA:1.20.58.100 450 559 5.3E-36 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 Pfam PF00890 FAD binding domain 14 408 2.1E-115 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RBRH_RS08825 3674f3ac72cb5df25eeaab034a830417 591 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 589 5.3E-237 T 23-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 PANTHER PTHR11835:SF52 3 165 4.7E-233 T 23-04-2016 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 PANTHER PTHR11835:SF52 189 256 4.7E-233 T 23-04-2016 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 PANTHER PTHR11835:SF52 276 417 4.7E-233 T 23-04-2016 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 411 1.3E-113 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 7 417 3.3E-221 T 23-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 SMART SM01329 29 413 2.1E-175 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 PANTHER PTHR11835 3 165 4.7E-233 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 PANTHER PTHR11835 189 256 4.7E-233 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 PANTHER PTHR11835 276 417 4.7E-233 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 Gene3D G3DSA:3.40.718.10 12 417 1.9E-161 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RBRH_RS02210 0f0f66f42c70c7e15f75047c39ffdd25 417 SUPERFAMILY SSF53659 3 417 6.91E-146 T 23-04-2016 RBRH_RS01700 e1d1578d55bd50b877873c63812677d0 380 Pfam PF03054 tRNA methyl transferase 4 357 6.6E-134 T 23-04-2016 RBRH_RS01700 e1d1578d55bd50b877873c63812677d0 380 Gene3D G3DSA:2.40.30.10 279 360 6.8E-30 T 23-04-2016 RBRH_RS01700 e1d1578d55bd50b877873c63812677d0 380 PANTHER PTHR11933 1 357 3.0E-182 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RBRH_RS01700 e1d1578d55bd50b877873c63812677d0 380 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 358 38.168 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RBRH_RS01700 e1d1578d55bd50b877873c63812677d0 380 PANTHER PTHR11933:SF10 1 357 3.0E-182 T 23-04-2016 RBRH_RS01700 e1d1578d55bd50b877873c63812677d0 380 SUPERFAMILY SSF52402 3 241 3.75E-55 T 23-04-2016 RBRH_RS01700 e1d1578d55bd50b877873c63812677d0 380 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 357 5.0E-131 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RBRH_RS01700 e1d1578d55bd50b877873c63812677d0 380 Gene3D G3DSA:3.40.50.620 2 208 5.2E-94 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS01700 e1d1578d55bd50b877873c63812677d0 380 Gene3D G3DSA:2.30.30.280 210 278 3.5E-32 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 SMART SM00382 30 218 7.9E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 Pfam PF09383 NIL domain 268 339 3.1E-22 T 23-04-2016 IPR018449 NIL domain RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 Pfam PF00005 ABC transporter 21 169 6.9E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 Gene3D G3DSA:3.40.50.300 1 236 2.9E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 PANTHER PTHR24220:SF455 3 304 2.2E-147 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 SMART SM00930 265 340 4.7E-30 T 23-04-2016 IPR018449 NIL domain RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 SUPERFAMILY SSF55021 248 343 1.49E-23 T 23-04-2016 RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 Gene3D G3DSA:3.30.70.260 237 343 6.4E-31 T 23-04-2016 RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 PANTHER PTHR24220 3 304 2.2E-147 T 23-04-2016 RBRH_RS03025 bbe5ca48da4b4796ef1c7a646e926949 344 SUPERFAMILY SSF52540 1 240 9.82E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 Pfam PF07687 Peptidase dimerisation domain 179 286 2.2E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 PANTHER PTHR11014 7 378 2.3E-84 T 23-04-2016 RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 Pfam PF01546 Peptidase family M20/M25/M40 66 375 2.0E-45 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 65 74 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 Gene3D G3DSA:3.30.70.360 192 292 8.4E-36 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 PANTHER PTHR11014:SF106 7 378 2.3E-84 T 23-04-2016 RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 SUPERFAMILY SSF53187 296 377 4.19E-64 T 23-04-2016 RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 SUPERFAMILY SSF53187 2 182 4.19E-64 T 23-04-2016 RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 Gene3D G3DSA:3.40.630.10 2 191 6.8E-73 T 23-04-2016 RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 Gene3D G3DSA:3.40.630.10 320 377 6.8E-73 T 23-04-2016 RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 SUPERFAMILY SSF55031 183 292 1.94E-30 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 379 52.065 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 377 5.0E-160 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RBRH_RS06380 4f8d9f7b502343e16ae98f0924d2f830 379 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 101 139 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 123 152 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 415 442 4.1E-11 T 23-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Gene3D G3DSA:2.40.50.140 327 398 5.9E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Gene3D G3DSA:3.40.50.10190 601 678 2.7E-26 T 23-04-2016 IPR001357 BRCT domain RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 PANTHER PTHR23389 14 541 1.9E-193 T 23-04-2016 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Hamap MF_01588 DNA ligase [ligA]. 11 676 54.914 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 339 354 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 PIRSF PIRSF001604 4 681 2.4E-241 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Pfam PF12826 Helix-hairpin-helix motif 518 581 5.7E-26 T 23-04-2016 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 PANTHER PTHR23389:SF9 14 541 1.9E-193 T 23-04-2016 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 SMART SM00532 12 456 8.0E-261 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 16 326 4.4E-121 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Pfam PF14520 Helix-hairpin-helix domain 455 509 6.6E-5 T 23-04-2016 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 SUPERFAMILY SSF50249 325 408 8.39E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 603 675 9.3E-13 T 23-04-2016 IPR001357 BRCT domain RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 20 671 7.2E-254 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Gene3D G3DSA:1.10.150.20 512 592 1.4E-35 T 23-04-2016 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 SMART SM00278 488 507 1000.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 SMART SM00278 520 539 160.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 SMART SM00278 454 473 140.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 SMART SM00278 552 571 5.4 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 SUPERFAMILY SSF56091 12 324 7.04E-115 T 23-04-2016 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Gene3D G3DSA:1.10.287.610 11 76 4.2E-29 T 23-04-2016 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 SUPERFAMILY SSF52113 600 676 1.31E-19 T 23-04-2016 IPR001357 BRCT domain RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Gene3D G3DSA:3.30.470.30 127 260 1.7E-50 T 23-04-2016 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 330 405 2.0E-34 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 SMART SM00292 602 679 2.9E-15 T 23-04-2016 IPR001357 BRCT domain RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 SUPERFAMILY SSF47781 412 591 4.45E-64 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RBRH_RS06410 0393c83aae4bf2658d4c2ca5c3eef3f3 681 Gene3D G3DSA:1.10.150.20 443 510 2.3E-25 T 23-04-2016 RBRH_RS11740 411d2e798138f96db1a23bc318cab999 657 Pfam PF01464 Transglycosylase SLT domain 496 603 2.3E-23 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RBRH_RS11740 411d2e798138f96db1a23bc318cab999 657 SUPERFAMILY SSF53955 490 652 7.65E-47 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS11740 411d2e798138f96db1a23bc318cab999 657 SUPERFAMILY SSF48435 39 487 3.14E-107 T 23-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 RBRH_RS11740 411d2e798138f96db1a23bc318cab999 657 Gene3D G3DSA:1.10.1240.20 420 472 4.5E-6 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RBRH_RS11740 411d2e798138f96db1a23bc318cab999 657 Gene3D G3DSA:1.10.530.10 485 648 1.5E-46 T 23-04-2016 RBRH_RS11740 411d2e798138f96db1a23bc318cab999 657 Pfam PF14718 Soluble lytic murein transglycosylase L domain 419 473 5.8E-7 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RBRH_RS11740 411d2e798138f96db1a23bc318cab999 657 PANTHER PTHR21666 470 653 2.2E-40 T 23-04-2016 RBRH_RS11740 411d2e798138f96db1a23bc318cab999 657 Gene3D G3DSA:1.25.20.10 39 399 1.3E-90 T 23-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 713 826 7.6E-9 T 23-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 Gene3D G3DSA:3.40.50.300 2 166 2.2E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 PANTHER PTHR11669:SF0 1 380 1.3E-161 T 23-04-2016 RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 SUPERFAMILY SSF48019 244 362 1.65E-28 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 Gene3D G3DSA:1.10.8.60 167 242 2.1E-32 T 23-04-2016 RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 358 8.1E-24 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 PANTHER PTHR11669 1 380 1.3E-161 T 23-04-2016 RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 SUPERFAMILY SSF52540 32 225 4.79E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 Gene3D G3DSA:1.20.272.10 243 358 1.2E-39 T 23-04-2016 RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 SMART SM00382 37 179 1.0E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.7E-40 T 23-04-2016 RBRH_RS05725 88e9d128019269f53d9fd3513c25e9ea 840 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 2.5E-125 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 SMART SM00382 26 238 1.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 SMART SM00382 343 511 1.6E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 SUPERFAMILY SSF52540 297 522 1.15E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 Gene3D G3DSA:3.40.50.300 2 270 9.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 Gene3D G3DSA:3.40.50.300 320 528 1.4E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 Pfam PF12848 ABC transporter 224 309 1.4E-21 T 23-04-2016 IPR032781 ABC-transporter extension domain RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 PANTHER PTHR19211 2 527 0.0 T 23-04-2016 RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 PANTHER PTHR19211:SF38 2 527 0.0 T 23-04-2016 RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 SUPERFAMILY SSF52540 6 237 4.55E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 Pfam PF00005 ABC transporter 18 184 2.6E-19 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS05955 ca95caba70568dd5fb4a065662631355 530 Pfam PF00005 ABC transporter 335 466 1.6E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS09515 00fce7f6553e7260cbd4a599a68bb751 152 Gene3D G3DSA:3.30.1330.40 1 151 1.4E-59 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RBRH_RS09515 00fce7f6553e7260cbd4a599a68bb751 152 SUPERFAMILY SSF55298 1 151 5.34E-51 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RBRH_RS09515 00fce7f6553e7260cbd4a599a68bb751 152 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 8 151 5.2E-27 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RBRH_RS09515 00fce7f6553e7260cbd4a599a68bb751 152 PANTHER PTHR11803:SF2 1 152 3.7E-41 T 23-04-2016 RBRH_RS09515 00fce7f6553e7260cbd4a599a68bb751 152 PANTHER PTHR11803 1 152 3.7E-41 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 815 43.201 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Gene3D G3DSA:2.40.50.140 42 160 3.7E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Gene3D G3DSA:3.30.70.380 712 821 5.9E-21 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 SMART SM00896 710 821 7.6E-25 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 SUPERFAMILY SSF55681 474 698 1.39E-44 T 23-04-2016 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Gene3D G3DSA:3.50.40.10 204 398 2.3E-74 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 SMART SM00874 408 478 1.7E-30 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Pfam PF01588 Putative tRNA binding domain 45 151 3.3E-25 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 821 1.6E-220 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Gene3D G3DSA:3.30.930.10 497 698 2.7E-57 T 23-04-2016 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 PANTHER PTHR10947:SF0 2 821 1.8E-254 T 23-04-2016 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 PANTHER PTHR10947 2 821 1.8E-254 T 23-04-2016 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 SUPERFAMILY SSF50249 39 204 5.63E-50 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Gene3D G3DSA:3.30.56.20 407 482 6.3E-25 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 SUPERFAMILY SSF56037 201 398 4.18E-68 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 SUPERFAMILY SSF46955 408 482 3.85E-19 T 23-04-2016 IPR009061 Putative DNA-binding domain RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Gene3D G3DSA:3.30.56.10 161 190 5.7E-24 T 23-04-2016 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Gene3D G3DSA:3.30.56.10 1 38 5.7E-24 T 23-04-2016 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 SMART SM00873 218 392 1.6E-81 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 SUPERFAMILY SSF54991 705 821 3.4E-18 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Pfam PF03483 B3/4 domain 219 392 2.3E-63 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 821 1.6E-21 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RBRH_RS05325 abccc4e788b4c11baf2f7527090da275 822 Pfam PF03484 tRNA synthetase B5 domain 411 478 4.8E-19 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RBRH_RS04360 bee8e8729685519ae186cc912392d927 165 Gene3D G3DSA:3.40.630.30 64 133 5.3E-10 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS04360 bee8e8729685519ae186cc912392d927 165 SUPERFAMILY SSF55729 11 124 1.59E-9 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS09090 c97029944dd77a42f98f3965685611fc 130 Pfam PF03840 Preprotein translocase SecG subunit 8 75 8.8E-22 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RBRH_RS09090 c97029944dd77a42f98f3965685611fc 130 PANTHER PTHR34182 6 129 5.6E-23 T 23-04-2016 RBRH_RS09090 c97029944dd77a42f98f3965685611fc 130 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 4.7E-36 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RBRH_RS09090 c97029944dd77a42f98f3965685611fc 130 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 4.7E-36 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RBRH_RS09090 c97029944dd77a42f98f3965685611fc 130 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 4.7E-36 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RBRH_RS09090 c97029944dd77a42f98f3965685611fc 130 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 4.7E-36 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RBRH_RS09090 c97029944dd77a42f98f3965685611fc 130 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 5.6E-26 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RBRH_RS16265 ece6f19c87543bcd0aeb445cdd441667 345 Gene3D G3DSA:3.30.700.10 185 231 2.1E-5 T 23-04-2016 RBRH_RS16265 ece6f19c87543bcd0aeb445cdd441667 345 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 181 204 6.7E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS16265 ece6f19c87543bcd0aeb445cdd441667 345 Pfam PF13633 Prokaryotic N-terminal methylation site 182 207 1.2E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS16265 ece6f19c87543bcd0aeb445cdd441667 345 SUPERFAMILY SSF54523 184 288 6.04E-10 T 23-04-2016 RBRH_RS03325 3a7117b8f8de019c180d05ac5f7c9e35 79 Pfam PF00550 Phosphopantetheine attachment site 6 72 4.4E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS03325 3a7117b8f8de019c180d05ac5f7c9e35 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.365 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RBRH_RS03325 3a7117b8f8de019c180d05ac5f7c9e35 79 Gene3D G3DSA:1.10.1200.10 3 75 1.1E-34 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS03325 3a7117b8f8de019c180d05ac5f7c9e35 79 SUPERFAMILY SSF47336 2 76 2.36E-23 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS03325 3a7117b8f8de019c180d05ac5f7c9e35 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 74 1.6E-35 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RBRH_RS03325 3a7117b8f8de019c180d05ac5f7c9e35 79 PANTHER PTHR20863 4 73 8.4E-30 T 23-04-2016 RBRH_RS03325 3a7117b8f8de019c180d05ac5f7c9e35 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 1.0E-13 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RBRH_RS03325 3a7117b8f8de019c180d05ac5f7c9e35 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS06780 4b82cf3043b454f45e6167b583c9ed22 305 PANTHER PTHR11795:SF404 1 263 1.2E-98 T 23-04-2016 RBRH_RS06780 4b82cf3043b454f45e6167b583c9ed22 305 PANTHER PTHR11795:SF404 280 301 1.2E-98 T 23-04-2016 RBRH_RS06780 4b82cf3043b454f45e6167b583c9ed22 305 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 293 6.7E-36 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RBRH_RS06780 4b82cf3043b454f45e6167b583c9ed22 305 PANTHER PTHR11795 1 263 1.2E-98 T 23-04-2016 RBRH_RS06780 4b82cf3043b454f45e6167b583c9ed22 305 PANTHER PTHR11795 280 301 1.2E-98 T 23-04-2016 RBRH_RS05790 ac0d2afcfaa7110fb71b179069f9ab01 350 SUPERFAMILY SSF47413 29 86 5.0E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS05790 ac0d2afcfaa7110fb71b179069f9ab01 350 Pfam PF13464 Domain of unknown function (DUF4115) 273 349 1.1E-21 T 23-04-2016 IPR025194 Domain of unknown function DUF4115 RBRH_RS05790 ac0d2afcfaa7110fb71b179069f9ab01 350 PANTHER PTHR34475:SF1 18 350 1.7E-29 T 23-04-2016 RBRH_RS05790 ac0d2afcfaa7110fb71b179069f9ab01 350 Gene3D G3DSA:1.10.260.40 27 96 8.8E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS05790 ac0d2afcfaa7110fb71b179069f9ab01 350 PANTHER PTHR34475 18 350 1.7E-29 T 23-04-2016 RBRH_RS05790 ac0d2afcfaa7110fb71b179069f9ab01 350 Pfam PF13413 Helix-turn-helix domain 34 94 6.0E-20 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS05420 ab1bfa82b9efe56957b0f15df5524b20 256 Gene3D G3DSA:1.10.287.130 30 93 1.8E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS05420 ab1bfa82b9efe56957b0f15df5524b20 256 PANTHER PTHR24423:SF562 31 253 3.1E-17 T 23-04-2016 RBRH_RS05420 ab1bfa82b9efe56957b0f15df5524b20 256 SMART SM00387 144 256 0.0021 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS05420 ab1bfa82b9efe56957b0f15df5524b20 256 SUPERFAMILY SSF55874 86 253 5.62E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS05420 ab1bfa82b9efe56957b0f15df5524b20 256 Pfam PF00512 His Kinase A (phospho-acceptor) domain 31 96 8.5E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS05420 ab1bfa82b9efe56957b0f15df5524b20 256 Gene3D G3DSA:3.30.565.10 100 253 1.4E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS05420 ab1bfa82b9efe56957b0f15df5524b20 256 SUPERFAMILY SSF47384 20 96 1.69E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS05420 ab1bfa82b9efe56957b0f15df5524b20 256 PANTHER PTHR24423 31 253 3.1E-17 T 23-04-2016 RBRH_RS05420 ab1bfa82b9efe56957b0f15df5524b20 256 SMART SM00388 30 97 2.7E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS03690 d679dd67365f2c95fda8e3ba87bd34a7 383 Gene3D G3DSA:3.20.20.410 77 375 4.4E-69 T 23-04-2016 IPR002763 Protein of unknown function DUF72 RBRH_RS03690 d679dd67365f2c95fda8e3ba87bd34a7 383 PANTHER PTHR30348 85 374 1.7E-22 T 23-04-2016 RBRH_RS03690 d679dd67365f2c95fda8e3ba87bd34a7 383 SUPERFAMILY SSF117396 86 374 2.35E-51 T 23-04-2016 IPR002763 Protein of unknown function DUF72 RBRH_RS03690 d679dd67365f2c95fda8e3ba87bd34a7 383 Pfam PF01904 Protein of unknown function DUF72 108 373 2.3E-41 T 23-04-2016 IPR002763 Protein of unknown function DUF72 RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 Gene3D G3DSA:3.40.630.10 5 178 1.8E-101 T 23-04-2016 RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 Gene3D G3DSA:3.40.630.10 298 396 1.8E-101 T 23-04-2016 RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 374 3.1E-113 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 PANTHER PTHR11014 13 398 1.3E-153 T 23-04-2016 RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 PIRSF PIRSF005962 2 398 1.7E-130 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 PANTHER PTHR11014:SF63 13 398 1.3E-153 T 23-04-2016 RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 SUPERFAMILY SSF53187 298 395 3.14E-86 T 23-04-2016 RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 SUPERFAMILY SSF53187 4 197 3.14E-86 T 23-04-2016 RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 Gene3D G3DSA:3.30.70.360 181 297 1.6E-42 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 SUPERFAMILY SSF55031 183 296 3.79E-31 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 Pfam PF07687 Peptidase dimerisation domain 185 281 1.6E-10 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RBRH_RS01215 fbada3af9b9870247fd26eb3bd0d7e76 407 Pfam PF01546 Peptidase family M20/M25/M40 73 356 2.7E-34 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RBRH_RS07160 6f3d3118fd4621ded8f5c1b9f9e2ca36 147 Pfam PF12802 MarR family 37 94 2.5E-10 T 23-04-2016 RBRH_RS07160 6f3d3118fd4621ded8f5c1b9f9e2ca36 147 SMART SM00347 31 131 2.4E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS07160 6f3d3118fd4621ded8f5c1b9f9e2ca36 147 PANTHER PTHR33164 4 146 4.7E-22 T 23-04-2016 RBRH_RS07160 6f3d3118fd4621ded8f5c1b9f9e2ca36 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.4E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS07160 6f3d3118fd4621ded8f5c1b9f9e2ca36 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.4E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS07160 6f3d3118fd4621ded8f5c1b9f9e2ca36 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 1.4E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS07160 6f3d3118fd4621ded8f5c1b9f9e2ca36 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.4E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS07160 6f3d3118fd4621ded8f5c1b9f9e2ca36 147 Gene3D G3DSA:1.10.10.10 3 144 8.6E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS07160 6f3d3118fd4621ded8f5c1b9f9e2ca36 147 SUPERFAMILY SSF46785 5 145 1.46E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11410 f98a48f35c9468446981fb2a56a52b0d 286 Hamap MF_01274 Type III pantothenate kinase [coaX]. 13 279 17.819 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RBRH_RS11410 f98a48f35c9468446981fb2a56a52b0d 286 SUPERFAMILY SSF53067 140 276 5.74E-26 T 23-04-2016 RBRH_RS11410 f98a48f35c9468446981fb2a56a52b0d 286 PANTHER PTHR34265 14 283 6.3E-33 T 23-04-2016 RBRH_RS11410 f98a48f35c9468446981fb2a56a52b0d 286 Gene3D G3DSA:3.30.420.40 109 278 9.4E-37 T 23-04-2016 RBRH_RS11410 f98a48f35c9468446981fb2a56a52b0d 286 Pfam PF03309 Type III pantothenate kinase 15 227 8.1E-57 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RBRH_RS11410 f98a48f35c9468446981fb2a56a52b0d 286 SUPERFAMILY SSF53067 15 137 2.27E-23 T 23-04-2016 RBRH_RS11410 f98a48f35c9468446981fb2a56a52b0d 286 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 15 275 5.4E-28 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RBRH_RS05470 255fdb170c89a688e67d46f1d62bfba8 281 PANTHER PTHR37426:SF1 2 280 2.3E-106 T 23-04-2016 RBRH_RS05470 255fdb170c89a688e67d46f1d62bfba8 281 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 274 5.3E-72 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RBRH_RS05470 255fdb170c89a688e67d46f1d62bfba8 281 SUPERFAMILY SSF53335 9 278 8.31E-91 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS05470 255fdb170c89a688e67d46f1d62bfba8 281 PANTHER PTHR37426 2 280 2.3E-106 T 23-04-2016 RBRH_RS05470 255fdb170c89a688e67d46f1d62bfba8 281 Gene3D G3DSA:3.40.50.150 1 278 1.5E-112 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS05470 255fdb170c89a688e67d46f1d62bfba8 281 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 268 38.527 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 SMART SM00955 249 581 1.1E-181 T 23-04-2016 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 Gene3D G3DSA:2.40.50.140 654 738 2.7E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 SMART SM00357 75 134 5.5E-12 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 Pfam PF00773 RNB domain 249 580 3.9E-101 T 23-04-2016 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 SMART SM00316 652 735 2.5E-12 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 SMART SM00316 69 131 3.3 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 Hamap MF_01895 Ribonuclease R [rnr]. 28 735 55.744 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 Pfam PF00575 S1 RNA binding domain 651 732 2.5E-12 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 PANTHER PTHR23355 610 755 5.7E-229 T 23-04-2016 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 PANTHER PTHR23355 2 579 5.7E-229 T 23-04-2016 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 SUPERFAMILY SSF50249 654 734 5.61E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 SUPERFAMILY SSF50249 56 136 1.21E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 Pfam PF08206 Ribonuclease B OB domain 76 133 1.8E-21 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 TIGRFAM TIGR02063 RNase_R: ribonuclease R 9 735 7.3E-251 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 SUPERFAMILY SSF50249 127 226 7.28E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 SUPERFAMILY SSF50249 209 651 9.14E-140 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 PANTHER PTHR23355:SF9 610 755 5.7E-229 T 23-04-2016 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 PANTHER PTHR23355:SF9 2 579 5.7E-229 T 23-04-2016 RBRH_RS06330 d468e3148a463dd84635b1ec822d6ef6 816 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 65 735 9.2E-212 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 RBRH_RS00885 eeb704294e40d20503b142faffdd1562 237 PANTHER PTHR11820:SF8 43 235 1.6E-45 T 23-04-2016 RBRH_RS00885 eeb704294e40d20503b142faffdd1562 237 SUPERFAMILY SSF56529 17 232 2.35E-51 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS00885 eeb704294e40d20503b142faffdd1562 237 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 20 229 3.2E-43 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS00885 eeb704294e40d20503b142faffdd1562 237 PANTHER PTHR11820 43 235 1.6E-45 T 23-04-2016 RBRH_RS00885 eeb704294e40d20503b142faffdd1562 237 Gene3D G3DSA:3.90.850.10 17 234 2.7E-51 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS00885 eeb704294e40d20503b142faffdd1562 237 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 18 229 8.3E-71 T 23-04-2016 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 RBRH_RS07895 35bb1568138edea396fc767892db258d 234 SUPERFAMILY SSF74653 154 230 2.35E-18 T 23-04-2016 RBRH_RS07895 35bb1568138edea396fc767892db258d 234 Gene3D G3DSA:3.30.1150.10 127 234 3.5E-14 T 23-04-2016 RBRH_RS07895 35bb1568138edea396fc767892db258d 234 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 155 232 4.6E-19 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RBRH_RS07895 35bb1568138edea396fc767892db258d 234 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 156 232 2.2E-15 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 RBRH_RS07895 35bb1568138edea396fc767892db258d 234 PRINTS PR01217 Proline rich extensin signature 33 45 1.1E-12 T 23-04-2016 RBRH_RS07895 35bb1568138edea396fc767892db258d 234 PRINTS PR01217 Proline rich extensin signature 50 71 1.1E-12 T 23-04-2016 RBRH_RS07895 35bb1568138edea396fc767892db258d 234 PRINTS PR01217 Proline rich extensin signature 78 94 1.1E-12 T 23-04-2016 RBRH_RS07895 35bb1568138edea396fc767892db258d 234 PRINTS PR01217 Proline rich extensin signature 114 139 1.1E-12 T 23-04-2016 RBRH_RS07895 35bb1568138edea396fc767892db258d 234 PRINTS PR01217 Proline rich extensin signature 95 112 1.1E-12 T 23-04-2016 RBRH_RS09945 9aac9d8518504a89a654154cd41ab168 300 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 7 291 3.1E-153 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RBRH_RS09945 9aac9d8518504a89a654154cd41ab168 300 PANTHER PTHR22572 7 274 5.7E-171 T 23-04-2016 RBRH_RS09945 9aac9d8518504a89a654154cd41ab168 300 SUPERFAMILY SSF53448 6 291 1.13E-90 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS09945 9aac9d8518504a89a654154cd41ab168 300 PANTHER PTHR22572:SF105 7 274 5.7E-171 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RBRH_RS09945 9aac9d8518504a89a654154cd41ab168 300 Pfam PF00483 Nucleotidyl transferase 7 243 6.5E-69 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RBRH_RS09945 9aac9d8518504a89a654154cd41ab168 300 Gene3D G3DSA:3.90.550.10 6 268 7.0E-66 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS05115 82f0752dd6ffa898154e6b93ef52526c 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RBRH_RS05115 82f0752dd6ffa898154e6b93ef52526c 258 PANTHER PTHR11941 1 255 4.7E-121 T 23-04-2016 RBRH_RS05115 82f0752dd6ffa898154e6b93ef52526c 258 SUPERFAMILY SSF52096 1 258 1.9E-89 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS05115 82f0752dd6ffa898154e6b93ef52526c 258 Gene3D G3DSA:3.90.226.10 1 256 1.1E-98 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS05115 82f0752dd6ffa898154e6b93ef52526c 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 6.8E-82 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RBRH_RS05115 82f0752dd6ffa898154e6b93ef52526c 258 PANTHER PTHR11941:SF54 1 255 4.7E-121 T 23-04-2016 RBRH_RS08110 50807c30f2473b62963bebfe961afc69 118 Pfam PF00550 Phosphopantetheine attachment site 50 106 9.4E-5 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08110 50807c30f2473b62963bebfe961afc69 118 Gene3D G3DSA:1.10.1200.10 46 112 1.3E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08110 50807c30f2473b62963bebfe961afc69 118 SUPERFAMILY SSF47336 49 113 4.58E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS03665 9ea8e9b3f4940c8829d48096e0898051 502 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 310 6.9E-97 T 23-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 RBRH_RS03665 9ea8e9b3f4940c8829d48096e0898051 502 PANTHER PTHR30005:SF4 5 499 4.6E-140 T 23-04-2016 RBRH_RS03665 9ea8e9b3f4940c8829d48096e0898051 502 Gene3D G3DSA:3.30.420.40 3 131 1.6E-43 T 23-04-2016 RBRH_RS03665 9ea8e9b3f4940c8829d48096e0898051 502 Gene3D G3DSA:3.30.420.150 132 315 3.0E-50 T 23-04-2016 RBRH_RS03665 9ea8e9b3f4940c8829d48096e0898051 502 SUPERFAMILY SSF53067 8 133 9.06E-34 T 23-04-2016 RBRH_RS03665 9ea8e9b3f4940c8829d48096e0898051 502 SUPERFAMILY SSF53067 137 314 2.68E-40 T 23-04-2016 RBRH_RS03665 9ea8e9b3f4940c8829d48096e0898051 502 PANTHER PTHR30005 5 499 4.6E-140 T 23-04-2016 RBRH_RS03665 9ea8e9b3f4940c8829d48096e0898051 502 PIRSF PIRSF001267 1 501 1.7E-195 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RBRH_RS03665 9ea8e9b3f4940c8829d48096e0898051 502 SUPERFAMILY SSF109604 317 498 6.91E-45 T 23-04-2016 RBRH_RS03665 9ea8e9b3f4940c8829d48096e0898051 502 Pfam PF02541 Ppx/GppA phosphatase family 28 311 1.5E-69 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RBRH_RS09500 f35e0f93f02b6c19b3faab612c5a91a1 158 Pfam PF03167 Uracil DNA glycosylase superfamily 10 155 4.0E-9 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS09500 f35e0f93f02b6c19b3faab612c5a91a1 158 SUPERFAMILY SSF52141 4 157 2.09E-36 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS09500 f35e0f93f02b6c19b3faab612c5a91a1 158 SMART SM00986 6 157 3.1E-8 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS09500 f35e0f93f02b6c19b3faab612c5a91a1 158 SMART SM00987 6 157 3.1E-8 T 23-04-2016 RBRH_RS09500 f35e0f93f02b6c19b3faab612c5a91a1 158 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 4 153 1.3E-57 T 23-04-2016 IPR026353 Hypoxanthine-DNA glycosylase RBRH_RS09500 f35e0f93f02b6c19b3faab612c5a91a1 158 Gene3D G3DSA:3.40.470.10 5 156 6.3E-34 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 SUPERFAMILY SSF82714 710 792 1.18E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 SUPERFAMILY SSF82866 819 1015 3.66E-46 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 Gene3D G3DSA:3.30.2090.10 710 797 1.6E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 SUPERFAMILY SSF82866 290 491 5.49E-48 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 Gene3D G3DSA:3.30.70.1430 40 141 1.8E-30 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 SUPERFAMILY SSF82714 183 266 9.81E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 SUPERFAMILY SSF82693 40 130 1.15E-23 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 Gene3D G3DSA:3.30.70.1430 559 648 1.0E-10 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 SUPERFAMILY SSF82693 795 845 9.94E-14 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1015 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.3E-78 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.3E-78 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.3E-78 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.3E-78 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 2.3E-78 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.3E-78 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.3E-78 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.3E-78 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 2.3E-78 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PANTHER PTHR32063:SF21 1 1028 0.0 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 SUPERFAMILY SSF82693 268 324 3.14E-23 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 Gene3D G3DSA:1.10.3850.10 276 491 1.0E-58 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 Gene3D G3DSA:1.10.3850.10 800 1017 2.5E-55 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 SUPERFAMILY SSF82693 556 653 1.62E-16 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 SUPERFAMILY SSF82693 666 706 9.94E-14 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 Gene3D G3DSA:3.30.2090.10 183 265 2.5E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 SUPERFAMILY SSF82693 136 182 3.14E-23 T 23-04-2016 RBRH_RS08425 90107f67da367fa7421706b1cf08bfa7 1037 PANTHER PTHR32063 1 1028 0.0 T 23-04-2016 RBRH_RS11435 95fa11bb6f046c29a53130d38069bde5 278 SUPERFAMILY SSF52096 40 272 7.62E-58 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS11435 95fa11bb6f046c29a53130d38069bde5 278 Pfam PF00378 Enoyl-CoA hydratase/isomerase 44 274 9.8E-38 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RBRH_RS11435 95fa11bb6f046c29a53130d38069bde5 278 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 117 137 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RBRH_RS11435 95fa11bb6f046c29a53130d38069bde5 278 PANTHER PTHR11941 1 272 9.9E-115 T 23-04-2016 RBRH_RS11435 95fa11bb6f046c29a53130d38069bde5 278 Gene3D G3DSA:3.90.226.10 10 269 3.4E-55 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS11435 95fa11bb6f046c29a53130d38069bde5 278 PANTHER PTHR11941:SF15 1 272 9.9E-115 T 23-04-2016 RBRH_RS05240 3173207b39e3aac2c602a4e39e409291 368 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS05240 3173207b39e3aac2c602a4e39e409291 368 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.1E-139 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS05240 3173207b39e3aac2c602a4e39e409291 368 Pfam PF01264 Chorismate synthase 10 345 3.0E-136 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS05240 3173207b39e3aac2c602a4e39e409291 368 Gene3D G3DSA:3.60.150.10 9 356 4.7E-154 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS05240 3173207b39e3aac2c602a4e39e409291 368 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS05240 3173207b39e3aac2c602a4e39e409291 368 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.434 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS05240 3173207b39e3aac2c602a4e39e409291 368 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS05240 3173207b39e3aac2c602a4e39e409291 368 SUPERFAMILY SSF103263 4 354 2.75E-146 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS05240 3173207b39e3aac2c602a4e39e409291 368 PIRSF PIRSF001456 3 362 7.8E-137 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS05240 3173207b39e3aac2c602a4e39e409291 368 PANTHER PTHR21085 2 351 1.3E-202 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 Pfam PF01170 Putative RNA methylase family UPF0020 174 333 2.5E-36 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 Pfam PF02926 THUMP domain 46 165 1.3E-11 T 23-04-2016 IPR004114 THUMP domain GO:0003723 RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 PANTHER PTHR14911 357 405 2.1E-43 T 23-04-2016 RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 PANTHER PTHR14911 3 224 2.1E-43 T 23-04-2016 RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 PANTHER PTHR14911 270 338 2.1E-43 T 23-04-2016 RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 SMART SM00981 68 166 1.6E-21 T 23-04-2016 IPR004114 THUMP domain GO:0003723 RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 PANTHER PTHR14911:SF13 357 405 2.1E-43 T 23-04-2016 RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 PANTHER PTHR14911:SF13 3 224 2.1E-43 T 23-04-2016 RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 PANTHER PTHR14911:SF13 270 338 2.1E-43 T 23-04-2016 RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 Gene3D G3DSA:3.40.50.150 270 408 5.7E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 Gene3D G3DSA:3.40.50.150 160 226 5.7E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 SUPERFAMILY SSF53335 273 407 3.2E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01710 d4389674bc6bc292f9daa46d80e36e97 430 SUPERFAMILY SSF53335 159 229 3.2E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 2.1E-78 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 Gene3D G3DSA:3.30.470.20 189 326 1.2E-60 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 SMART SM01210 328 420 6.4E-49 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 7.8E-173 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 3.7E-28 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 SUPERFAMILY SSF52440 1 101 3.74E-35 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 SUPERFAMILY SSF56059 102 324 1.26E-63 T 23-04-2016 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 Gene3D G3DSA:3.40.50.20 2 93 4.2E-37 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 Gene3D G3DSA:3.30.1490.20 119 188 1.3E-33 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 Gene3D G3DSA:3.90.600.10 329 419 3.1E-32 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 42.728 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 7.2E-36 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 SUPERFAMILY SSF51246 327 420 3.45E-30 T 23-04-2016 IPR011054 Rudiment single hybrid motif RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 SMART SM01209 101 294 2.4E-138 T 23-04-2016 RBRH_RS09235 d8fa79fb7a2895ec2798246fa8142eae 424 PANTHER PTHR10520 1 423 2.0E-262 T 23-04-2016 RBRH_RS10320 d021d74b9e36a2da28d6a3e77cebc969 363 PANTHER PTHR21716 1 350 3.8E-86 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like RBRH_RS10320 d021d74b9e36a2da28d6a3e77cebc969 363 Pfam PF01594 Domain of unknown function DUF20 15 346 2.2E-34 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like RBRH_RS10320 d021d74b9e36a2da28d6a3e77cebc969 363 PANTHER PTHR21716:SF20 1 350 3.8E-86 T 23-04-2016 RBRH_RS01615 5310f0a5e73ef783e4d6e1115ff3f2a6 284 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 21 164 24.726 T 23-04-2016 IPR026592 Outer membrane protein assembly factor BamE RBRH_RS01615 5310f0a5e73ef783e4d6e1115ff3f2a6 284 Pfam PF04355 SmpA / OmlA family 61 130 4.0E-23 T 23-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RBRH_RS01615 5310f0a5e73ef783e4d6e1115ff3f2a6 284 PANTHER PTHR37482 17 139 1.3E-22 T 23-04-2016 RBRH_RS01615 5310f0a5e73ef783e4d6e1115ff3f2a6 284 PANTHER PTHR37482:SF1 17 139 1.3E-22 T 23-04-2016 RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 314 2.6E-118 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 PANTHER PTHR21621 1 313 3.0E-109 T 23-04-2016 RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 155.32 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 SUPERFAMILY SSF52440 1 124 3.74E-37 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 126 299 2.6E-69 T 23-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 Gene3D G3DSA:3.40.50.20 1 130 2.4E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 Gene3D G3DSA:3.30.1490.20 139 193 3.9E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 PANTHER PTHR21621:SF4 1 313 3.0E-109 T 23-04-2016 RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 SUPERFAMILY SSF56059 126 313 2.87E-53 T 23-04-2016 RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 122 9.6E-40 T 23-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RBRH_RS11300 44d8ae0a6267d666360c2f000e5a36cb 316 Gene3D G3DSA:3.30.470.20 194 302 8.9E-44 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RBRH_RS08025 6f9fa07dee7796cddb4386693cde29d8 260 PANTHER PTHR12029 14 194 1.5E-28 T 23-04-2016 RBRH_RS08025 6f9fa07dee7796cddb4386693cde29d8 260 Gene3D G3DSA:3.40.1280.10 15 170 6.4E-29 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RBRH_RS08025 6f9fa07dee7796cddb4386693cde29d8 260 PIRSF PIRSF004808 11 255 3.6E-67 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RBRH_RS08025 6f9fa07dee7796cddb4386693cde29d8 260 SUPERFAMILY SSF75217 13 177 1.9E-35 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RBRH_RS08025 6f9fa07dee7796cddb4386693cde29d8 260 Pfam PF00588 SpoU rRNA Methylase family 15 167 2.2E-34 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RBRH_RS08025 6f9fa07dee7796cddb4386693cde29d8 260 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 14 248 7.3E-60 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RBRH_RS07700 272c78475ef92ee9da670be25c7c48ef 246 PANTHER PTHR30098 24 241 6.5E-59 T 23-04-2016 RBRH_RS07700 272c78475ef92ee9da670be25c7c48ef 246 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 211 3.9E-71 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RBRH_RS07700 272c78475ef92ee9da670be25c7c48ef 246 SUPERFAMILY SSF55729 2 235 8.48E-84 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS07700 272c78475ef92ee9da670be25c7c48ef 246 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 246 94.162 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RBRH_RS07700 272c78475ef92ee9da670be25c7c48ef 246 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 223 2.7E-56 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RBRH_RS11210 cf5fa10f706968fa9f1e4764e922f22f 73 Pfam PF11174 Protein of unknown function (DUF2970) 16 68 3.3E-25 T 23-04-2016 IPR021344 Protein of unknown function DUF2970 RBRH_RS09845 af9395e9cce5ef601db7b0617fd3b044 274 Gene3D G3DSA:3.90.550.10 12 230 1.3E-31 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS09845 af9395e9cce5ef601db7b0617fd3b044 274 SUPERFAMILY SSF53448 10 248 4.5E-32 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS09845 af9395e9cce5ef601db7b0617fd3b044 274 Pfam PF00535 Glycosyl transferase family 2 13 124 1.7E-12 T 23-04-2016 IPR001173 Glycosyltransferase 2-like RBRH_RS09845 af9395e9cce5ef601db7b0617fd3b044 274 PANTHER PTHR22916 12 272 4.8E-25 T 23-04-2016 RBRH_RS01730 4d976d309cf7a2f7306139ec1a79771b 431 Gene3D G3DSA:1.20.1250.20 20 218 6.8E-21 T 23-04-2016 RBRH_RS01730 4d976d309cf7a2f7306139ec1a79771b 431 Gene3D G3DSA:1.20.1250.20 243 425 7.1E-20 T 23-04-2016 RBRH_RS01730 4d976d309cf7a2f7306139ec1a79771b 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 81 97 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RBRH_RS01730 4d976d309cf7a2f7306139ec1a79771b 431 PANTHER PTHR23508 20 425 2.0E-132 T 23-04-2016 RBRH_RS01730 4d976d309cf7a2f7306139ec1a79771b 431 Pfam PF00083 Sugar (and other) transporter 23 224 2.1E-17 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RBRH_RS01730 4d976d309cf7a2f7306139ec1a79771b 431 PANTHER PTHR23508:SF11 20 425 2.0E-132 T 23-04-2016 RBRH_RS01730 4d976d309cf7a2f7306139ec1a79771b 431 SUPERFAMILY SSF103473 16 426 6.15E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS06820 d8fd20d6a43f8cbe6b29ff8127334073 256 PANTHER PTHR33508:SF2 43 247 9.8E-80 T 23-04-2016 RBRH_RS06820 d8fd20d6a43f8cbe6b29ff8127334073 256 PANTHER PTHR33508 43 247 9.8E-80 T 23-04-2016 RBRH_RS06820 d8fd20d6a43f8cbe6b29ff8127334073 256 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 47 248 7.7E-33 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RBRH_RS06820 d8fd20d6a43f8cbe6b29ff8127334073 256 Pfam PF01914 MarC family integral membrane protein 50 252 4.3E-48 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RBRH_RS00555 14e9664251625dcc6921342c71f24886 576 Gene3D G3DSA:3.40.50.980 33 235 7.9E-37 T 23-04-2016 RBRH_RS00555 14e9664251625dcc6921342c71f24886 576 Gene3D G3DSA:3.40.50.980 236 379 1.2E-50 T 23-04-2016 RBRH_RS00555 14e9664251625dcc6921342c71f24886 576 Pfam PF13193 AMP-binding enzyme C-terminal domain 479 554 2.9E-18 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS00555 14e9664251625dcc6921342c71f24886 576 ProSitePatterns PS00455 Putative AMP-binding domain signature. 221 232 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS00555 14e9664251625dcc6921342c71f24886 576 Gene3D G3DSA:2.30.38.10 389 463 3.3E-26 T 23-04-2016 RBRH_RS00555 14e9664251625dcc6921342c71f24886 576 Pfam PF00501 AMP-binding enzyme 41 470 8.8E-107 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS00555 14e9664251625dcc6921342c71f24886 576 SUPERFAMILY SSF56801 32 566 1.7E-159 T 23-04-2016 RBRH_RS00555 14e9664251625dcc6921342c71f24886 576 PANTHER PTHR24095 19 568 3.0E-205 T 23-04-2016 RBRH_RS00555 14e9664251625dcc6921342c71f24886 576 Gene3D G3DSA:3.30.300.30 467 566 3.5E-34 T 23-04-2016 RBRH_RS07405 620723f66d62a2a2a78cbb87b9dfb1e4 582 PIRSF PIRSF029745 24 582 4.8E-147 T 23-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 RBRH_RS07405 620723f66d62a2a2a78cbb87b9dfb1e4 582 Pfam PF08479 POTRA domain, ShlB-type 88 167 1.5E-21 T 23-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type RBRH_RS07405 620723f66d62a2a2a78cbb87b9dfb1e4 582 PANTHER PTHR34597 32 582 2.1E-161 T 23-04-2016 RBRH_RS07405 620723f66d62a2a2a78cbb87b9dfb1e4 582 PANTHER PTHR34597:SF2 32 582 2.1E-161 T 23-04-2016 RBRH_RS07405 620723f66d62a2a2a78cbb87b9dfb1e4 582 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 189 523 1.9E-17 T 23-04-2016 IPR005565 Haemolysin activator HlyB RBRH_RS07405 620723f66d62a2a2a78cbb87b9dfb1e4 582 Gene3D G3DSA:3.10.20.310 83 167 2.2E-23 T 23-04-2016 RBRH_RS07405 620723f66d62a2a2a78cbb87b9dfb1e4 582 Gene3D G3DSA:2.40.160.50 198 582 1.1E-116 T 23-04-2016 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 Pfam PF00072 Response regulator receiver domain 4 111 1.6E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 Gene3D G3DSA:3.40.50.2300 1 116 2.7E-26 T 23-04-2016 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 Pfam PF00158 Sigma-54 interaction domain 142 307 8.6E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 SMART SM00382 161 305 7.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 SMART SM00448 2 112 9.9E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 SUPERFAMILY SSF52172 1 185 3.84E-35 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 SUPERFAMILY SSF52540 142 374 1.57E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 Pfam PF02954 Bacterial regulatory protein, Fis family 403 444 1.0E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 SUPERFAMILY SSF46689 353 445 6.45E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 Gene3D G3DSA:1.10.8.60 314 386 5.8E-21 T 23-04-2016 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 PANTHER PTHR32071 4 457 7.2E-177 T 23-04-2016 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 2.9E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 2.9E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 Gene3D G3DSA:3.40.50.300 139 313 8.3E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09615 f7e744fd300d62afbb3f7908671e6bb0 473 Gene3D G3DSA:1.10.10.60 399 441 9.7E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 Hamap MF_00163 Peptide deformylase [def]. 2 163 29.995 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 PIRSF PIRSF004749 1 167 9.4E-55 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 Pfam PF01327 Polypeptide deformylase 4 152 2.6E-50 T 23-04-2016 IPR023635 Peptide deformylase RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 PANTHER PTHR10458:SF10 1 165 3.8E-83 T 23-04-2016 RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 SUPERFAMILY SSF56420 2 164 5.76E-60 T 23-04-2016 IPR023635 Peptide deformylase RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 PRINTS PR01576 Peptide deformylase signature 33 62 2.4E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 PRINTS PR01576 Peptide deformylase signature 121 150 2.4E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 PRINTS PR01576 Peptide deformylase signature 102 120 2.4E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 PRINTS PR01576 Peptide deformylase signature 90 101 2.4E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 2.9E-56 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 Gene3D G3DSA:3.90.45.10 5 165 8.5E-63 T 23-04-2016 IPR023635 Peptide deformylase RBRH_RS12110 866424be82adcfcdae6632c9e5264481 167 PANTHER PTHR10458 1 165 3.8E-83 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 215 235 1.2E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 247 261 1.2E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 279 293 1.2E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 475 494 1.2E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 313 340 1.2E-49 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 SMART SM00382 214 348 4.6E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 516 32.15 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 Pfam PF11638 DnaA N-terminal domain 3 66 4.7E-18 T 23-04-2016 IPR024633 DnaA N-terminal domain RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 SUPERFAMILY SSF52540 181 393 3.02E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 426 494 1.2E-32 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 PANTHER PTHR30050:SF2 1 103 1.3E-198 T 23-04-2016 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 PANTHER PTHR30050:SF2 180 517 1.3E-198 T 23-04-2016 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 Gene3D G3DSA:3.40.50.300 179 346 3.0E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 SUPERFAMILY SSF48295 413 516 4.45E-38 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 Gene3D G3DSA:1.10.8.60 348 415 6.4E-29 T 23-04-2016 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 SMART SM00760 425 494 3.9E-44 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 515 4.4E-171 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 PANTHER PTHR30050 1 103 1.3E-198 T 23-04-2016 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 PANTHER PTHR30050 180 517 1.3E-198 T 23-04-2016 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 ProSitePatterns PS01008 DnaA protein signature. 475 494 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 Gene3D G3DSA:1.10.1750.10 416 516 2.7E-42 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RBRH_RS00005 23f657bb7a5a132d712e38d940e35647 517 Pfam PF00308 Bacterial dnaA protein 182 399 1.1E-86 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RBRH_RS02695 63820630f9a6bebffea2ae0e863d3707 271 PANTHER PTHR13696 1 258 6.9E-85 T 23-04-2016 RBRH_RS02695 63820630f9a6bebffea2ae0e863d3707 271 Gene3D G3DSA:3.40.50.300 1 248 2.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02695 63820630f9a6bebffea2ae0e863d3707 271 PANTHER PTHR13696:SF1 1 258 6.9E-85 T 23-04-2016 RBRH_RS02695 63820630f9a6bebffea2ae0e863d3707 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 269 1.1E-103 T 23-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 RBRH_RS02695 63820630f9a6bebffea2ae0e863d3707 271 PIRSF PIRSF003092 1 271 1.3E-87 T 23-04-2016 IPR025501 ATP binding protein MinD RBRH_RS02695 63820630f9a6bebffea2ae0e863d3707 271 SUPERFAMILY SSF52540 1 269 3.96E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02695 63820630f9a6bebffea2ae0e863d3707 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 1.0E-28 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RBRH_RS09405 c25abf52fcc9626498ea6e724d7ae3b0 405 Pfam PF03594 Benzoate membrane transport protein 24 399 4.5E-153 T 23-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RBRH_RS09405 c25abf52fcc9626498ea6e724d7ae3b0 405 PANTHER PTHR30199:SF0 14 405 1.3E-154 T 23-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RBRH_RS09405 c25abf52fcc9626498ea6e724d7ae3b0 405 TIGRFAM TIGR00843 benE: benzoate transporter 28 401 2.7E-127 T 23-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RBRH_RS09405 c25abf52fcc9626498ea6e724d7ae3b0 405 PANTHER PTHR30199 14 405 1.3E-154 T 23-04-2016 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 SMART SM01240 6 473 0.0 T 23-04-2016 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 PANTHER PTHR11911 298 484 8.6E-246 T 23-04-2016 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 PANTHER PTHR11911 1 280 8.6E-246 T 23-04-2016 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 PIRSF PIRSF000130 1 487 1.3E-206 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 Pfam PF00571 CBS domain 94 138 1.3E-10 T 23-04-2016 IPR000644 CBS domain RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 Pfam PF00571 CBS domain 147 202 2.3E-7 T 23-04-2016 IPR000644 CBS domain RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 SUPERFAMILY SSF51412 215 477 3.79E-128 T 23-04-2016 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 SUPERFAMILY SSF51412 2 89 3.79E-128 T 23-04-2016 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 486 85.248 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 SMART SM00116 156 204 3.2E-9 T 23-04-2016 IPR000644 CBS domain RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 SMART SM00116 95 142 5.3E-12 T 23-04-2016 IPR000644 CBS domain RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 SUPERFAMILY SSF54631 94 202 2.07E-28 T 23-04-2016 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 455 3.9E-193 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 PANTHER PTHR11911:SF6 298 484 8.6E-246 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 PANTHER PTHR11911:SF6 1 280 8.6E-246 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 Gene3D G3DSA:3.20.20.70 4 485 2.4E-202 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS06580 bdab0bb797b984288ec689364c83940f 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 473 1.5E-164 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 RBRH_RS01135 effc527759268855208e85fcf4ff8e71 228 SUPERFAMILY SSF53271 14 220 6.49E-45 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS01135 effc527759268855208e85fcf4ff8e71 228 Gene3D G3DSA:3.40.50.2020 10 219 1.8E-47 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS01135 effc527759268855208e85fcf4ff8e71 228 Pfam PF00156 Phosphoribosyl transferase domain 55 160 4.3E-10 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RBRH_RS01135 effc527759268855208e85fcf4ff8e71 228 PANTHER PTHR19278 14 216 1.7E-38 T 23-04-2016 RBRH_RS01135 effc527759268855208e85fcf4ff8e71 228 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 228 28.533 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS01135 effc527759268855208e85fcf4ff8e71 228 PANTHER PTHR19278:SF9 14 216 1.7E-38 T 23-04-2016 RBRH_RS03135 d22736e18eeecb38158e05bbaaf8b24a 452 PANTHER PTHR30624:SF1 7 452 3.2E-140 T 23-04-2016 RBRH_RS03135 d22736e18eeecb38158e05bbaaf8b24a 452 Pfam PF01523 Putative modulator of DNA gyrase 38 325 1.9E-54 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS03135 d22736e18eeecb38158e05bbaaf8b24a 452 SUPERFAMILY SSF111283 13 451 5.75E-122 T 23-04-2016 RBRH_RS03135 d22736e18eeecb38158e05bbaaf8b24a 452 PANTHER PTHR30624 7 452 3.2E-140 T 23-04-2016 RBRH_RS07730 5e227435ff20b3ad01ae3bcde678e044 626 SUPERFAMILY SSF53474 289 432 1.55E-21 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS07730 5e227435ff20b3ad01ae3bcde678e044 626 SUPERFAMILY SSF53474 512 583 1.55E-21 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS07730 5e227435ff20b3ad01ae3bcde678e044 626 SUPERFAMILY SSF53474 3 137 9.45E-19 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS07730 5e227435ff20b3ad01ae3bcde678e044 626 SUPERFAMILY SSF53474 185 255 9.45E-19 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS07730 5e227435ff20b3ad01ae3bcde678e044 626 Gene3D G3DSA:3.40.50.1820 330 584 3.6E-17 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS07730 5e227435ff20b3ad01ae3bcde678e044 626 Gene3D G3DSA:3.40.50.1820 23 138 1.1E-13 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS07730 5e227435ff20b3ad01ae3bcde678e044 626 Gene3D G3DSA:3.40.50.1820 185 255 1.1E-13 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS07730 5e227435ff20b3ad01ae3bcde678e044 626 Pfam PF12146 Serine aminopeptidase, S33 44 154 4.1E-7 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PANTHER PTHR11922 1 524 2.9E-280 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 Pfam PF02540 NAD synthase 210 288 1.8E-7 T 23-04-2016 IPR022310 NAD/GMP synthase RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 Gene3D G3DSA:3.40.50.620 218 394 5.0E-60 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 46 60 7.5E-6 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 76 92 7.5E-6 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 5 19 7.5E-6 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 SUPERFAMILY SSF54810 400 527 3.27E-46 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 Gene3D G3DSA:3.30.300.10 396 527 2.1E-51 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 199 8.8E-75 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PANTHER PTHR11922:SF2 1 524 2.9E-280 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 1.9E-6 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 1.9E-6 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 1.9E-6 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PRINTS PR00097 Anthranilate synthase component II signature 49 58 2.2E-5 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PRINTS PR00097 Anthranilate synthase component II signature 76 87 2.2E-5 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 PRINTS PR00097 Anthranilate synthase component II signature 172 185 2.2E-5 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 Gene3D G3DSA:3.40.50.880 2 217 3.0E-61 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 Pfam PF00117 Glutamine amidotransferase class-I 7 195 2.4E-35 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 527 9.2E-146 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 SUPERFAMILY SSF52402 192 413 3.97E-60 T 23-04-2016 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 527 55.925 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 SUPERFAMILY SSF52317 1 232 1.47E-57 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS06590 c0e27a34f0ee82f005289ebd17af073e 527 Pfam PF00958 GMP synthase C terminal domain 441 526 3.3E-41 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SMART SM00091 11 78 0.049 T 23-04-2016 IPR000014 PAS domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SMART SM00091 139 207 4.2E-4 T 23-04-2016 IPR000014 PAS domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 Gene3D G3DSA:3.30.565.10 319 494 1.7E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 379 490 4.5E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SUPERFAMILY SSF52172 513 632 1.25E-28 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SUPERFAMILY SSF55874 322 494 2.36E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 Gene3D G3DSA:3.40.50.2300 513 636 1.7E-27 T 23-04-2016 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SMART SM00086 214 255 0.03 T 23-04-2016 IPR001610 PAC motif RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SMART SM00086 85 127 0.54 T 23-04-2016 IPR001610 PAC motif RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SUPERFAMILY SSF47384 256 334 1.96E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 Gene3D G3DSA:3.30.450.20 125 249 5.6E-27 T 23-04-2016 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 PANTHER PTHR24423 22 629 9.1E-141 T 23-04-2016 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 Pfam PF13426 PAS domain 152 254 4.8E-14 T 23-04-2016 IPR000014 PAS domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 Pfam PF13426 PAS domain 24 126 8.8E-12 T 23-04-2016 IPR000014 PAS domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 Gene3D G3DSA:1.10.287.130 258 318 7.6E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SMART SM00448 514 627 5.8E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SUPERFAMILY SSF55785 123 250 1.29E-27 T 23-04-2016 IPR000014 PAS domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SMART SM00388 267 333 5.4E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 3.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 3.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 469 3.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SMART SM00387 379 492 4.3E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 Gene3D G3DSA:3.30.450.20 24 124 2.1E-19 T 23-04-2016 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 Pfam PF00072 Response regulator receiver domain 516 626 1.7E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 134 1.2E-18 T 23-04-2016 IPR000014 PAS domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 260 1.6E-25 T 23-04-2016 IPR000014 PAS domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 SUPERFAMILY SSF55785 24 136 3.38E-22 T 23-04-2016 IPR000014 PAS domain RBRH_RS05360 b00066a971994faa702cc3d69b9811a2 641 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 333 4.6E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS02290 e4522c8d10c85c727a689a766525bda6 379 Pfam PF02445 Quinolinate synthetase A protein 45 351 6.8E-102 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RBRH_RS02290 e4522c8d10c85c727a689a766525bda6 379 PANTHER PTHR30573 25 375 2.5E-149 T 23-04-2016 RBRH_RS02290 e4522c8d10c85c727a689a766525bda6 379 SUPERFAMILY SSF142754 42 352 9.68E-107 T 23-04-2016 RBRH_RS02290 e4522c8d10c85c727a689a766525bda6 379 Hamap MF_00567 Quinolinate synthase A [nadA]. 7 358 67.494 T 23-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RBRH_RS02290 e4522c8d10c85c727a689a766525bda6 379 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 40 352 1.9E-105 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.4E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.4E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.4E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.4E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 Gene3D G3DSA:2.30.33.40 1 95 2.8E-39 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 SUPERFAMILY SSF50129 1 95 1.32E-34 T 23-04-2016 IPR011032 GroES-like RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 SMART SM00883 2 94 6.9E-58 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 3.5E-36 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.918 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 PANTHER PTHR10772 1 95 1.4E-43 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RBRH_RS10020 a7cad924be87ce665b121903d78b3dd2 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Pfam PF01568 Molydopterin dinucleotide binding domain 831 935 2.4E-27 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 SMART SM00926 259 313 2.6E-15 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 SUPERFAMILY SSF54292 42 114 4.11E-18 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 PANTHER PTHR11615:SF112 561 960 1.7E-234 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 PANTHER PTHR11615:SF112 43 91 1.7E-234 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 PANTHER PTHR11615:SF112 258 516 1.7E-234 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Gene3D G3DSA:3.30.70.20 236 269 1.2E-4 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 260 311 9.6E-16 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 SUPERFAMILY SSF50692 798 940 1.74E-40 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 PIRSF PIRSF036643 38 969 0.0 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Gene3D G3DSA:3.40.228.10 394 585 6.0E-57 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Pfam PF12838 4Fe-4S dicluster domain 188 245 4.1E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 SUPERFAMILY SSF53706 260 788 5.37E-192 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Gene3D G3DSA:2.20.25.90 270 313 1.5E-18 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 123 162 1.4E-16 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Gene3D G3DSA:3.30.70.20 174 235 5.7E-15 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Pfam PF00384 Molybdopterin oxidoreductase 316 746 2.6E-74 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 41 116 1.4E-23 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 264 939 9.7E-276 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Gene3D G3DSA:3.40.50.740 586 788 2.2E-89 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Gene3D G3DSA:3.40.50.740 316 393 2.2E-89 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Gene3D G3DSA:3.10.20.30 38 95 2.7E-7 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 Gene3D G3DSA:2.40.40.20 789 942 7.4E-41 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 SUPERFAMILY SSF54862 115 254 4.1E-37 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 SMART SM00929 123 163 2.9E-18 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 PANTHER PTHR11615 561 960 1.7E-234 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 PANTHER PTHR11615 43 91 1.7E-234 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 PANTHER PTHR11615 258 516 1.7E-234 T 23-04-2016 RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 232 243 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS02885 e2246a3b3fc91667a1db9910470c839d 979 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 264 282 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 Gene3D G3DSA:1.10.287.80 243 289 5.8E-29 T 23-04-2016 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 Pfam PF00231 ATP synthase 4 293 4.1E-89 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 PANTHER PTHR11693 1 294 1.6E-111 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 Gene3D G3DSA:3.40.1380.10 64 192 1.2E-38 T 23-04-2016 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 Gene3D G3DSA:1.10.287.80 209 242 1.8E-40 T 23-04-2016 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 Gene3D G3DSA:1.10.287.80 19 60 1.8E-40 T 23-04-2016 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 2.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 2.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 PRINTS PR00126 ATP synthase gamma subunit signature 241 260 2.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 PRINTS PR00126 ATP synthase gamma subunit signature 272 293 2.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 294 35.167 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 280 293 - T 23-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 SUPERFAMILY SSF52943 2 294 3.01E-92 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain RBRH_RS00540 90ce12ed297ab1553e53e9c899334003 294 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 294 3.0E-103 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 SUPERFAMILY SSF46600 202 254 1.44E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 Hamap MF_00203 UvrABC system protein C [uvrC]. 16 779 25.81 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 Pfam PF01541 GIY-YIG catalytic domain 31 105 5.8E-7 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 Gene3D G3DSA:4.10.860.10 194 255 1.2E-16 T 23-04-2016 IPR001943 UVR domain GO:0005515 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 Pfam PF14520 Helix-hairpin-helix domain 729 780 5.2E-6 T 23-04-2016 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 Gene3D G3DSA:3.40.1440.10 30 109 4.2E-7 T 23-04-2016 IPR027299 GIY-YIG domain RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 SUPERFAMILY SSF82771 29 112 8.24E-22 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 23 300 3.4E-93 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 SMART SM00465 29 110 1.9E-18 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 Gene3D G3DSA:1.10.150.20 728 781 3.0E-20 T 23-04-2016 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 531 714 2.4E-45 T 23-04-2016 IPR001162 UvrC family homology region RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 PANTHER PTHR30562:SF1 18 313 3.3E-191 T 23-04-2016 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 PANTHER PTHR30562:SF1 434 596 3.3E-191 T 23-04-2016 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 PANTHER PTHR30562:SF1 634 780 3.3E-191 T 23-04-2016 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 SMART SM00278 760 779 96.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 SMART SM00278 728 747 3.5 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 PANTHER PTHR30562 18 313 3.3E-191 T 23-04-2016 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 PANTHER PTHR30562 434 596 3.3E-191 T 23-04-2016 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 PANTHER PTHR30562 634 780 3.3E-191 T 23-04-2016 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 Pfam PF02151 UvrB/uvrC motif 216 249 6.0E-7 T 23-04-2016 IPR001943 UVR domain GO:0005515 RBRH_RS03420 6684bbf980c265a7f32f327b37135d2c 781 SUPERFAMILY SSF47781 679 781 3.18E-19 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 PANTHER PTHR30081:SF1 323 630 7.1E-173 T 23-04-2016 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 PANTHER PTHR30081:SF1 1 182 7.1E-173 T 23-04-2016 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 PANTHER PTHR30081:SF1 235 293 7.1E-173 T 23-04-2016 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 Pfam PF13721 SecD export protein N-terminal TM region 1 112 7.6E-35 T 23-04-2016 IPR027398 SecD export protein N-terminal TM domain RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 PANTHER PTHR30081 323 630 7.1E-173 T 23-04-2016 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 PANTHER PTHR30081 1 182 7.1E-173 T 23-04-2016 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 PANTHER PTHR30081 235 293 7.1E-173 T 23-04-2016 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 Gene3D G3DSA:1.20.1640.10 443 606 8.1E-23 T 23-04-2016 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 132 595 5.5E-133 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 355 588 3.8E-70 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 SUPERFAMILY SSF82866 405 602 1.83E-38 T 23-04-2016 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 SUPERFAMILY SSF82866 344 359 1.83E-38 T 23-04-2016 RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 Pfam PF07549 SecD/SecF GG Motif 126 147 4.2E-5 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 Pfam PF02355 Protein export membrane protein 428 598 3.9E-21 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RBRH_RS01720 109cc3b6acc26bc091af3bedea289e6c 685 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 609 45.157 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 SUPERFAMILY SSF52540 612 842 2.26E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 732 748 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 Pfam PF05190 MutS family domain IV 473 564 1.0E-31 T 23-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 PANTHER PTHR11361 26 843 0.0 T 23-04-2016 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 Gene3D G3DSA:3.40.50.300 613 842 2.5E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 Gene3D G3DSA:3.30.420.110 162 297 6.7E-35 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 42 916 0.0 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 Pfam PF05192 MutS domain III 310 604 8.9E-35 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 SMART SM00534 651 838 1.7E-114 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 PIRSF PIRSF037677 33 863 1.1E-154 T 23-04-2016 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 PANTHER PTHR11361:SF86 26 843 0.0 T 23-04-2016 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 Gene3D G3DSA:1.10.1420.10 359 522 2.3E-51 T 23-04-2016 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 Pfam PF05188 MutS domain II 165 294 6.4E-18 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 SUPERFAMILY SSF53150 152 321 1.83E-32 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 Pfam PF01624 MutS domain I 43 154 3.2E-42 T 23-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 SUPERFAMILY SSF48334 308 609 4.32E-84 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 42 912 24.316 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 SUPERFAMILY SSF55271 38 150 8.11E-43 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 Pfam PF00488 MutS domain V 655 840 1.2E-82 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 SMART SM00533 324 636 6.9E-84 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RBRH_RS08050 265490d891bbe3dbec60063500c99c70 928 Gene3D G3DSA:3.40.1170.10 37 155 1.1E-50 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 Gene3D G3DSA:1.20.58.180 218 299 1.1E-36 T 23-04-2016 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 PANTHER PTHR30075 2 300 4.4E-236 T 23-04-2016 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 2.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 2.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 2.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 2.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 2.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 300 2.0E-156 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 Gene3D G3DSA:3.30.930.10 1 216 1.8E-104 T 23-04-2016 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 SUPERFAMILY SSF55681 3 293 1.21E-128 T 23-04-2016 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 293 1.3E-148 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10450 87314fb91a121626aa8eff43b85181d6 302 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 294 60.328 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS07250 c370f54b4fe47c38a45e2fc2ab1c2947 79 Pfam PF16762 Ribbon-helix-helix domain 2 78 1.4E-39 T 23-04-2016 IPR031914 XACb0070, ribbon-helix-helix domain RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 Gene3D G3DSA:1.10.8.60 504 586 1.8E-32 T 23-04-2016 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 203 1.3E-43 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 Gene3D G3DSA:3.30.230.10 592 773 3.8E-76 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 PANTHER PTHR10046:SF43 11 778 0.0 T 23-04-2016 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 678 686 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 613 3.0E-55 T 23-04-2016 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 675 694 3.0E-55 T 23-04-2016 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 3.0E-55 T 23-04-2016 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 3.0E-55 T 23-04-2016 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 728 746 3.0E-55 T 23-04-2016 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 774 9.3E-95 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 TIGRFAM TIGR00763 lon: endopeptidase La 15 773 1.1E-295 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 SUPERFAMILY SSF52540 315 588 3.43E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 SUPERFAMILY SSF88697 13 204 9.69E-52 T 23-04-2016 IPR015947 PUA-like domain RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 Hamap MF_01973 Lon protease [lon]. 14 774 71.14 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 PANTHER PTHR10046 11 778 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 2.4E-16 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 PIRSF PIRSF001174 4 777 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 SMART SM00382 350 494 2.4E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 SMART SM00464 13 205 8.0E-72 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 SUPERFAMILY SSF54211 597 772 6.07E-59 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS07140 abeaafbd24a86fe99d566c3f4ee0a903 805 Gene3D G3DSA:3.40.50.300 314 503 1.5E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05830 f8e509e61085143581c62b419fce42da 449 PANTHER PTHR10264 20 387 1.2E-110 T 23-04-2016 IPR001972 Stomatin family GO:0016020 RBRH_RS05830 f8e509e61085143581c62b419fce42da 449 SUPERFAMILY SSF117892 166 289 3.53E-22 T 23-04-2016 IPR001107 Band 7 domain RBRH_RS05830 f8e509e61085143581c62b419fce42da 449 PANTHER PTHR10264:SF51 20 387 1.2E-110 T 23-04-2016 IPR010201 HflK GO:0016021 RBRH_RS05830 f8e509e61085143581c62b419fce42da 449 TIGRFAM TIGR01933 hflK: HflK protein 111 384 1.1E-88 T 23-04-2016 IPR010201 HflK GO:0016021 RBRH_RS05830 f8e509e61085143581c62b419fce42da 449 Pfam PF12221 Bacterial membrane protein N terminal 17 72 2.1E-12 T 23-04-2016 IPR020980 Menbrane protein HflK, N-terminal RBRH_RS05830 f8e509e61085143581c62b419fce42da 449 SMART SM00244 109 282 9.2E-29 T 23-04-2016 IPR001107 Band 7 domain RBRH_RS05830 f8e509e61085143581c62b419fce42da 449 Pfam PF01145 SPFH domain / Band 7 family 112 295 1.2E-28 T 23-04-2016 IPR001107 Band 7 domain RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 401 2.0E-21 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 PANTHER PTHR23135 1 451 9.0E-198 T 23-04-2016 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 Pfam PF08245 Mur ligase middle domain 110 290 7.4E-28 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 Gene3D G3DSA:3.40.50.720 6 92 4.8E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 Gene3D G3DSA:3.90.190.20 312 460 3.5E-55 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 SUPERFAMILY SSF53623 91 308 4.58E-71 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 SUPERFAMILY SSF53244 309 457 3.89E-47 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 SUPERFAMILY SSF51984 6 92 1.15E-29 T 23-04-2016 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 Pfam PF01225 Mur ligase family, catalytic domain 7 105 1.7E-25 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 PANTHER PTHR23135:SF5 1 451 9.0E-198 T 23-04-2016 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 Gene3D G3DSA:3.40.1190.10 94 311 5.0E-81 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 463 43.088 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01295 7bea4d5886a14e59780091e6c5c5c91d 463 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 456 6.4E-167 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 PANTHER PTHR18901 22 234 3.6E-47 T 23-04-2016 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 96 208 1.3E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 199 212 9.1E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 9.1E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 9.1E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 23 34 9.1E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 126 204 5.3E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 PANTHER PTHR18901:SF14 22 234 3.6E-47 T 23-04-2016 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 27 234 5.8E-59 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 Gene3D G3DSA:3.40.50.1000 21 40 1.5E-39 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 Gene3D G3DSA:3.40.50.1000 105 237 1.5E-39 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 Gene3D G3DSA:1.10.150.240 41 104 8.4E-12 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 Pfam PF13419 Haloacid dehalogenase-like hydrolase 27 209 1.2E-30 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS05070 6f8bbb1b928f575d961bf7e5bbda69cd 246 SUPERFAMILY SSF56784 23 234 1.21E-53 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 PANTHER PTHR32108:SF0 6 325 8.1E-138 T 23-04-2016 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 SUPERFAMILY SSF47789 248 320 5.23E-27 T 23-04-2016 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 Gene3D G3DSA:1.10.150.20 244 321 1.8E-36 T 23-04-2016 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 224 3.7E-22 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 SUPERFAMILY SSF55257 175 228 2.36E-31 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 SUPERFAMILY SSF55257 5 50 2.36E-31 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 Gene3D G3DSA:2.170.120.12 63 173 9.5E-41 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 SMART SM00662 20 230 8.0E-94 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 SUPERFAMILY SSF56553 50 174 4.71E-41 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 Gene3D G3DSA:3.30.1360.10 6 62 1.6E-10 T 23-04-2016 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 313 3.4E-106 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 314 35.229 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 PANTHER PTHR32108 6 325 8.1E-138 T 23-04-2016 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 323 7.0E-35 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 150 1.2E-23 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04525 57533b92b99ce0f35c4887f8063d0c47 325 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 248 305 7.8E-25 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 PANTHER PTHR11405 1 213 2.2E-121 T 23-04-2016 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 197 204 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 Gene3D G3DSA:3.30.470.20 100 213 1.1E-43 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 Gene3D G3DSA:3.30.1490.20 36 99 2.2E-24 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 197 213 1.2E-37 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 139 156 1.2E-37 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 104 123 1.2E-37 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 68 80 1.2E-37 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 PANTHER PTHR11405:SF47 1 213 2.2E-121 T 23-04-2016 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 64 78 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 21 213 8.4E-61 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 Gene3D G3DSA:3.40.50.20 2 33 2.5E-4 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS15185 d4b614d9bdf1cec519281bcec234bd19 213 SUPERFAMILY SSF56059 21 213 1.08E-69 T 23-04-2016 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 SUPERFAMILY SSF56645 37 293 1.57E-62 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 451 1.6E-23 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 Gene3D G3DSA:1.20.140.10 270 466 3.6E-57 T 23-04-2016 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 SUPERFAMILY SSF47203 288 467 3.7E-52 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 1.2E-11 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 273 1.1E-17 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 3.9E-14 T 23-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 Gene3D G3DSA:2.40.110.10 162 269 6.1E-29 T 23-04-2016 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 PANTHER PTHR10909 3 477 1.6E-230 T 23-04-2016 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 Gene3D G3DSA:1.10.540.10 38 161 1.4E-17 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 PANTHER PTHR10909:SF296 3 477 1.6E-230 T 23-04-2016 RBRH_RS10800 7b9d7a2ee447abc508c24e97d1c5cf80 595 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 470 590 4.9E-30 T 23-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 PANTHER PTHR13847:SF182 600 657 8.0E-38 T 23-04-2016 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 PANTHER PTHR13847:SF182 220 584 8.0E-38 T 23-04-2016 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 SUPERFAMILY SSF54373 480 552 9.16E-5 T 23-04-2016 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 Pfam PF01266 FAD dependent oxidoreductase 257 629 6.2E-39 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 257 657 6.9E-116 T 23-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 SUPERFAMILY SSF51905 570 655 2.27E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 SUPERFAMILY SSF51905 257 482 2.27E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 Gene3D G3DSA:3.50.50.60 389 481 5.8E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 Gene3D G3DSA:3.50.50.60 255 331 5.8E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 Gene3D G3DSA:3.50.50.60 570 655 5.8E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 115 235 3.7E-36 T 23-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 PANTHER PTHR13847 600 657 8.0E-38 T 23-04-2016 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 PANTHER PTHR13847 220 584 8.0E-38 T 23-04-2016 RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 Gene3D G3DSA:3.40.50.150 13 245 2.7E-85 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS00415 408d4b1516429562406c72b679169a3f 662 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 6 654 24.75 T 23-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 RBRH_RS11035 d49339c5d18381026b54f63d61b9b74c 304 PANTHER PTHR30448 1 295 1.2E-113 T 23-04-2016 RBRH_RS11035 d49339c5d18381026b54f63d61b9b74c 304 PANTHER PTHR30448:SF0 1 295 1.2E-113 T 23-04-2016 RBRH_RS11035 d49339c5d18381026b54f63d61b9b74c 304 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 287 39.303 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 RBRH_RS11035 d49339c5d18381026b54f63d61b9b74c 304 SUPERFAMILY SSF52540 1 161 8.21E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11035 d49339c5d18381026b54f63d61b9b74c 304 Pfam PF03668 P-loop ATPase protein family 1 285 7.6E-89 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 RBRH_RS11035 d49339c5d18381026b54f63d61b9b74c 304 PIRSF PIRSF005052 1 289 2.8E-106 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 RBRH_RS11035 d49339c5d18381026b54f63d61b9b74c 304 Gene3D G3DSA:3.40.50.300 1 161 2.0E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00015 60903b491162305df52753f917586469 827 Gene3D G3DSA:3.40.50.670 741 809 6.5E-99 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 Gene3D G3DSA:3.40.50.670 431 577 6.5E-99 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 Pfam PF00204 DNA gyrase B 248 417 9.5E-58 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PANTHER PTHR10169 747 827 2.1E-282 T 23-04-2016 RBRH_RS00015 60903b491162305df52753f917586469 827 PANTHER PTHR10169 1 580 2.1E-282 T 23-04-2016 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR00418 DNA topoisomerase II family signature 447 461 2.3E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR00418 DNA topoisomerase II family signature 82 95 2.3E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR00418 DNA topoisomerase II family signature 532 549 2.3E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR00418 DNA topoisomerase II family signature 129 143 2.3E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR00418 DNA topoisomerase II family signature 514 530 2.3E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR00418 DNA topoisomerase II family signature 295 308 2.3E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR00418 DNA topoisomerase II family signature 759 775 2.3E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR00418 DNA topoisomerase II family signature 552 564 2.3E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR00418 DNA topoisomerase II family signature 47 62 2.3E-67 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR01159 DNA gyrase subunit B signature 247 269 1.1E-73 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR01159 DNA gyrase subunit B signature 17 27 1.1E-73 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR01159 DNA gyrase subunit B signature 387 401 1.1E-73 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR01159 DNA gyrase subunit B signature 223 236 1.1E-73 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR01159 DNA gyrase subunit B signature 208 223 1.1E-73 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR01159 DNA gyrase subunit B signature 796 812 1.1E-73 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR01159 DNA gyrase subunit B signature 401 421 1.1E-73 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR01159 DNA gyrase subunit B signature 339 355 1.1E-73 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR01159 DNA gyrase subunit B signature 497 506 1.1E-73 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 PRINTS PR01159 DNA gyrase subunit B signature 780 792 1.1E-73 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 SUPERFAMILY SSF56719 421 587 2.25E-86 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RBRH_RS00015 60903b491162305df52753f917586469 827 SUPERFAMILY SSF56719 753 817 2.25E-86 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RBRH_RS00015 60903b491162305df52753f917586469 827 SUPERFAMILY SSF54211 248 419 5.12E-58 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS00015 60903b491162305df52753f917586469 827 ProSitePatterns PS00177 DNA topoisomerase II signature. 449 457 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 Gene3D G3DSA:3.30.230.10 247 419 1.5E-73 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS00015 60903b491162305df52753f917586469 827 SUPERFAMILY SSF55874 17 243 2.1E-65 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00015 60903b491162305df52753f917586469 827 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 17 827 9.1E-293 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 755 816 5.7E-29 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 Gene3D G3DSA:3.30.565.10 17 245 2.4E-92 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00015 60903b491162305df52753f917586469 827 Pfam PF01751 Toprim domain 446 558 6.9E-18 T 23-04-2016 IPR006171 Toprim domain RBRH_RS00015 60903b491162305df52753f917586469 827 SMART SM00387 43 203 7.3E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00015 60903b491162305df52753f917586469 827 SMART SM00433 47 820 3.0E-246 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS00015 60903b491162305df52753f917586469 827 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 44 201 7.0E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00015 60903b491162305df52753f917586469 827 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 14 827 99.294 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS05230 6dc5b85c896bea7800b9b408c7e07ad8 449 SUPERFAMILY SSF46785 311 369 6.65E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS05230 6dc5b85c896bea7800b9b408c7e07ad8 449 Gene3D G3DSA:1.10.10.10 312 363 8.4E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS05230 6dc5b85c896bea7800b9b408c7e07ad8 449 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 318 22.698 T 23-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial RBRH_RS05230 6dc5b85c896bea7800b9b408c7e07ad8 449 PANTHER PTHR30213 7 361 3.5E-88 T 23-04-2016 RBRH_RS05230 6dc5b85c896bea7800b9b408c7e07ad8 449 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 16 288 5.2E-66 T 23-04-2016 IPR017039 Virulence factor BrkB RBRH_RS05230 6dc5b85c896bea7800b9b408c7e07ad8 449 PANTHER PTHR30213:SF0 7 361 3.5E-88 T 23-04-2016 RBRH_RS05230 6dc5b85c896bea7800b9b408c7e07ad8 449 Pfam PF03631 Virulence factor BrkB 24 289 4.4E-58 T 23-04-2016 IPR017039 Virulence factor BrkB RBRH_RS12105 34b62f1dbd275619af6159ac8656f15a 337 SUPERFAMILY SSF50486 217 322 1.26E-27 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RBRH_RS12105 34b62f1dbd275619af6159ac8656f15a 337 PANTHER PTHR11138 5 324 1.7E-103 T 23-04-2016 RBRH_RS12105 34b62f1dbd275619af6159ac8656f15a 337 Gene3D G3DSA:3.10.25.10 219 323 2.7E-29 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS12105 34b62f1dbd275619af6159ac8656f15a 337 Pfam PF00551 Formyl transferase 7 189 9.6E-41 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS12105 34b62f1dbd275619af6159ac8656f15a 337 Pfam PF02911 Formyl transferase, C-terminal domain 216 314 1.8E-22 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS12105 34b62f1dbd275619af6159ac8656f15a 337 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 314 3.5E-81 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS12105 34b62f1dbd275619af6159ac8656f15a 337 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 317 33.468 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS12105 34b62f1dbd275619af6159ac8656f15a 337 SUPERFAMILY SSF53328 5 216 3.14E-60 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS12105 34b62f1dbd275619af6159ac8656f15a 337 Gene3D G3DSA:3.40.50.170 5 217 7.3E-72 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS12105 34b62f1dbd275619af6159ac8656f15a 337 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 144 167 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 SUPERFAMILY SSF51735 1 181 1.81E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 Gene3D G3DSA:3.40.50.720 1 184 3.0E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 160 4.1E-38 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 PANTHER PTHR11728 1 332 1.8E-111 T 23-04-2016 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 PIRSF PIRSF000114 1 333 9.4E-95 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 323 35.056 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 Gene3D G3DSA:1.10.1040.10 185 327 4.5E-53 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 6.4E-37 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 6.4E-37 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 6.4E-37 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 6.4E-37 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 6.4E-37 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 SUPERFAMILY SSF48179 180 332 1.87E-53 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 321 1.1E-47 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RBRH_RS11245 68727322e76f7fa44896b8a4acf7e8a6 334 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 PANTHER PTHR23416:SF8 1 254 3.1E-121 T 23-04-2016 RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 261 5.9E-27 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 PANTHER PTHR23416 1 254 3.1E-121 T 23-04-2016 RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 Gene3D G3DSA:1.20.1180.10 193 262 4.1E-23 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 260 6.3E-104 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 SUPERFAMILY SSF51161 2 262 8.49E-77 T 23-04-2016 IPR011004 Trimeric LpxA-like RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 PIRSF PIRSF000456 1 262 7.4E-103 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 262 46.622 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 Gene3D G3DSA:2.160.10.10 2 190 6.9E-52 T 23-04-2016 RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 5.5E-9 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS06500 a8ea155d86ce9fa692bf58dd547a9a2b 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 18 48 2.4E-7 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 SUPERFAMILY SSF53448 2 248 1.22E-61 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 Gene3D G3DSA:3.90.550.10 2 240 1.2E-69 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 448 40.48 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 295 4.8E-5 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 297 329 0.0011 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 391 423 2.2E-6 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 PANTHER PTHR22572 2 445 2.4E-192 T 23-04-2016 RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 2 451 6.7E-181 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 SUPERFAMILY SSF51161 250 434 2.1E-47 T 23-04-2016 IPR011004 Trimeric LpxA-like RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 399 427 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 Gene3D G3DSA:2.160.10.10 242 319 8.6E-15 T 23-04-2016 RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 PANTHER PTHR22572:SF115 2 445 2.4E-192 T 23-04-2016 RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 Gene3D G3DSA:2.160.10.10 320 451 2.6E-33 T 23-04-2016 RBRH_RS00995 1abd6c49035a0bcee0ed7d12f187aeeb 453 Pfam PF12804 MobA-like NTP transferase domain 4 132 8.1E-22 T 23-04-2016 IPR025877 MobA-like NTP transferase RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 SUPERFAMILY SSF55021 355 431 3.5E-9 T 23-04-2016 RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 PANTHER PTHR21499 1 377 2.5E-131 T 23-04-2016 RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 PIRSF PIRSF000098 1 442 1.2E-160 T 23-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 Pfam PF01842 ACT domain 357 424 6.4E-11 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 132 1.0E-19 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 Gene3D G3DSA:3.30.360.10 152 302 7.7E-58 T 23-04-2016 RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 Gene3D G3DSA:3.40.50.720 1 151 2.8E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 PANTHER PTHR21499:SF2 1 377 2.5E-131 T 23-04-2016 RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 Gene3D G3DSA:3.30.70.260 356 430 2.8E-7 T 23-04-2016 RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 SUPERFAMILY SSF55347 140 305 1.44E-52 T 23-04-2016 RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 SUPERFAMILY SSF51735 3 143 5.18E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 186 208 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS06070 6827932bc47e97713b2b35bc20858683 443 Pfam PF00742 Homoserine dehydrogenase 140 318 8.0E-66 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS09585 611e3cb5a3baff7ca19dc913ff0e74c6 147 SUPERFAMILY SSF47240 7 126 2.03E-5 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS09585 611e3cb5a3baff7ca19dc913ff0e74c6 147 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 5 142 2.1E-47 T 23-04-2016 IPR011971 Conserved hypothetical protein CHP02284 RBRH_RS09585 611e3cb5a3baff7ca19dc913ff0e74c6 147 PIRSF PIRSF029477 1 147 6.6E-56 T 23-04-2016 IPR016920 Uncharacterised conserved protein UCP029477 RBRH_RS09585 611e3cb5a3baff7ca19dc913ff0e74c6 147 Pfam PF09537 Domain of unknown function (DUF2383) 5 113 1.4E-38 T 23-04-2016 IPR019052 Domain of unknown function DUF2383 RBRH_RS09585 611e3cb5a3baff7ca19dc913ff0e74c6 147 Gene3D G3DSA:1.20.1260.10 17 126 8.6E-5 T 23-04-2016 IPR012347 Ferritin-related RBRH_RS01240 166a5f8b2c988166d9585b5543134a1b 209 PANTHER PTHR11237 3 209 6.3E-80 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RBRH_RS01240 166a5f8b2c988166d9585b5543134a1b 209 SUPERFAMILY SSF47240 47 123 7.31E-16 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS01240 166a5f8b2c988166d9585b5543134a1b 209 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 7 209 29.203 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RBRH_RS01240 166a5f8b2c988166d9585b5543134a1b 209 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 48 208 4.6E-41 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RBRH_RS01240 166a5f8b2c988166d9585b5543134a1b 209 PANTHER PTHR11237:SF3 3 209 6.3E-80 T 23-04-2016 RBRH_RS01240 166a5f8b2c988166d9585b5543134a1b 209 Gene3D G3DSA:1.20.1260.10 61 177 3.0E-7 T 23-04-2016 IPR012347 Ferritin-related RBRH_RS02785 879e2f79261b6282cde5997ef835a290 67 SUPERFAMILY SSF50249 1 66 7.71E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02785 879e2f79261b6282cde5997ef835a290 67 PRINTS PR00050 Cold shock protein signature 4 19 2.7E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS02785 879e2f79261b6282cde5997ef835a290 67 PRINTS PR00050 Cold shock protein signature 25 34 2.7E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS02785 879e2f79261b6282cde5997ef835a290 67 PRINTS PR00050 Cold shock protein signature 40 58 2.7E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS02785 879e2f79261b6282cde5997ef835a290 67 PANTHER PTHR11544 1 67 3.1E-33 T 23-04-2016 RBRH_RS02785 879e2f79261b6282cde5997ef835a290 67 Gene3D G3DSA:2.40.50.140 1 65 2.8E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02785 879e2f79261b6282cde5997ef835a290 67 SMART SM00357 3 67 1.8E-26 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RBRH_RS02785 879e2f79261b6282cde5997ef835a290 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.1E-28 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS02785 879e2f79261b6282cde5997ef835a290 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site RBRH_RS02785 879e2f79261b6282cde5997ef835a290 67 PIRSF PIRSF002599 1 67 9.3E-24 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 RBRH_RS09135 61104fc3c42d69c51f5837da855a5e35 212 PANTHER PTHR35809 1 212 7.9E-63 T 23-04-2016 RBRH_RS09135 61104fc3c42d69c51f5837da855a5e35 212 Pfam PF02666 Phosphatidylserine decarboxylase 42 209 5.0E-34 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RBRH_RS09135 61104fc3c42d69c51f5837da855a5e35 212 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 7 210 3.2E-68 T 23-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RBRH_RS09135 61104fc3c42d69c51f5837da855a5e35 212 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 7 212 36.254 T 23-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RBRH_RS04665 5631591db1eab9a4b036f1fc92cfbbc4 189 PANTHER PTHR35561:SF1 1 186 1.2E-14 T 23-04-2016 RBRH_RS04665 5631591db1eab9a4b036f1fc92cfbbc4 189 PANTHER PTHR35561 1 186 1.2E-14 T 23-04-2016 RBRH_RS04665 5631591db1eab9a4b036f1fc92cfbbc4 189 SUPERFAMILY SSF55144 7 183 5.06E-28 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RBRH_RS04665 5631591db1eab9a4b036f1fc92cfbbc4 189 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 7 182 3.2E-21 T 23-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RBRH_RS04665 5631591db1eab9a4b036f1fc92cfbbc4 189 Pfam PF02834 LigT like Phosphoesterase 103 176 3.7E-6 T 23-04-2016 IPR014051 Phosphoesterase, HXTX RBRH_RS04665 5631591db1eab9a4b036f1fc92cfbbc4 189 Pfam PF02834 LigT like Phosphoesterase 15 91 2.4E-5 T 23-04-2016 IPR014051 Phosphoesterase, HXTX RBRH_RS04665 5631591db1eab9a4b036f1fc92cfbbc4 189 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 6 184 16.012 T 23-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RBRH_RS04665 5631591db1eab9a4b036f1fc92cfbbc4 189 Gene3D G3DSA:3.90.1140.10 6 183 1.1E-31 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 SUPERFAMILY SSF52777 206 447 5.11E-15 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2098 2109 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 ProSitePatterns PS00455 Putative AMP-binding domain signature. 615 626 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 PANTHER PTHR24095 1481 2122 0.0 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 PANTHER PTHR24095 1317 1457 0.0 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 PANTHER PTHR24095 422 906 0.0 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Pfam PF00668 Condensation domain 1502 1795 2.5E-37 T 23-04-2016 IPR001242 Condensation domain RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Pfam PF00668 Condensation domain 23 290 1.9E-35 T 23-04-2016 IPR001242 Condensation domain RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Pfam PF00501 AMP-binding enzyme 474 867 7.8E-95 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Pfam PF00501 AMP-binding enzyme 1956 2124 5.7E-43 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 SUPERFAMILY SSF52777 1683 1942 1.67E-43 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Gene3D G3DSA:3.30.300.30 1329 1392 6.6E-45 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Gene3D G3DSA:3.30.300.30 862 919 6.6E-45 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 SUPERFAMILY SSF52777 26 214 1.78E-35 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Gene3D G3DSA:1.10.1200.10 1393 1456 4.6E-28 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 SMART SM00823 Phosphopantetheine attachment site 1388 1456 1.3E-4 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 SUPERFAMILY SSF47336 1380 1452 2.49E-20 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 SUPERFAMILY SSF52777 1500 1695 1.78E-29 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Pfam PF08242 Methyltransferase domain 985 1085 4.4E-13 T 23-04-2016 IPR013217 Methyltransferase type 12 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 SUPERFAMILY SSF56801 435 921 4.97E-153 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 SUPERFAMILY SSF56801 1324 1401 4.97E-153 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Gene3D G3DSA:3.40.50.980 620 778 5.4E-31 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 PANTHER PTHR24095:SF43 1481 2122 0.0 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 PANTHER PTHR24095:SF43 1317 1457 0.0 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 PANTHER PTHR24095:SF43 422 906 0.0 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 SUPERFAMILY SSF53335 947 1101 3.32E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Gene3D G3DSA:3.40.50.150 946 1093 1.3E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 495 891 1.2E-133 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1412 1427 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 SUPERFAMILY SSF56801 1917 2124 1.83E-57 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Gene3D G3DSA:3.40.50.980 1949 2121 1.1E-53 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Pfam PF13193 AMP-binding enzyme C-terminal domain 875 912 7.1E-6 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Gene3D G3DSA:2.30.38.10 779 857 4.2E-29 T 23-04-2016 RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Pfam PF00550 Phosphopantetheine attachment site 1390 1450 2.5E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS06835 fec79778e2fe8851ffacbe08336a1bed 2133 Gene3D G3DSA:3.40.50.980 468 619 1.6E-48 T 23-04-2016 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 289 1.6E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 SUPERFAMILY SSF47384 219 289 1.12E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 446 3.2E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07195 aba9e842616755875549adbb63c05789 454 SMART SM00388 234 293 2.5E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 47 152 7.7E-41 T 23-04-2016 IPR032408 Sensor histidine kinase RisS, periplasmic domain RBRH_RS07195 aba9e842616755875549adbb63c05789 454 SMART SM00304 181 233 5.8E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 3.3E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 3.3E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 3.3E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 3.3E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 Pfam PF00672 HAMP domain 164 230 1.2E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 SMART SM00387 331 447 5.3E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07195 aba9e842616755875549adbb63c05789 454 SUPERFAMILY SSF55874 284 446 4.32E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07195 aba9e842616755875549adbb63c05789 454 PANTHER PTHR24423 175 453 1.6E-55 T 23-04-2016 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 PANTHER PTHR24423 2 17 1.6E-55 T 23-04-2016 RBRH_RS07195 aba9e842616755875549adbb63c05789 454 Gene3D G3DSA:3.30.565.10 280 448 6.9E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07195 aba9e842616755875549adbb63c05789 454 Gene3D G3DSA:1.10.287.130 224 279 6.8E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS00560 2d99a8814f61e705974cfdd9e8ed1e0c 362 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 355 49.415 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS00560 2d99a8814f61e705974cfdd9e8ed1e0c 362 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 354 2.1E-132 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS00560 2d99a8814f61e705974cfdd9e8ed1e0c 362 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 353 4.1E-125 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS00560 2d99a8814f61e705974cfdd9e8ed1e0c 362 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 148 164 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS00560 2d99a8814f61e705974cfdd9e8ed1e0c 362 SUPERFAMILY SSF51726 5 357 4.36E-112 T 23-04-2016 RBRH_RS00560 2d99a8814f61e705974cfdd9e8ed1e0c 362 PANTHER PTHR21091 7 362 2.9E-143 T 23-04-2016 RBRH_RS00560 2d99a8814f61e705974cfdd9e8ed1e0c 362 Gene3D G3DSA:3.20.20.210 4 358 4.1E-147 T 23-04-2016 RBRH_RS00560 2d99a8814f61e705974cfdd9e8ed1e0c 362 PANTHER PTHR21091:SF2 7 362 2.9E-143 T 23-04-2016 RBRH_RS00560 2d99a8814f61e705974cfdd9e8ed1e0c 362 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS05580 00c5ad6988a6eb833d0f69195f28881d 257 PANTHER PTHR30050 2 249 1.6E-63 T 23-04-2016 RBRH_RS05580 00c5ad6988a6eb833d0f69195f28881d 257 PIRSF PIRSF003073 1 252 4.1E-81 T 23-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RBRH_RS05580 00c5ad6988a6eb833d0f69195f28881d 257 SMART SM00382 100 237 4.4E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05580 00c5ad6988a6eb833d0f69195f28881d 257 Pfam PF01695 IstB-like ATP binding protein 56 234 6.0E-63 T 23-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 RBRH_RS05580 00c5ad6988a6eb833d0f69195f28881d 257 Gene3D G3DSA:3.40.50.300 70 233 3.7E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05580 00c5ad6988a6eb833d0f69195f28881d 257 SUPERFAMILY SSF52540 68 232 3.43E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 Pfam PF07660 Secretin and TonB N terminus short domain 70 116 1.9E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 Pfam PF03958 Bacterial type II/III secretion system short domain 143 208 2.0E-10 T 23-04-2016 IPR005644 NolW-like RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 PANTHER PTHR30604 41 449 7.8E-81 T 23-04-2016 RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 Pfam PF00263 Bacterial type II and III secretion system protein 296 449 1.6E-44 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 SMART SM00965 69 117 3.5E-6 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 PRINTS PR00811 Bacterial general secretion pathway protein D signature 327 337 2.0E-20 T 23-04-2016 IPR001775 GspD/PilQ family RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 PRINTS PR00811 Bacterial general secretion pathway protein D signature 208 218 2.0E-20 T 23-04-2016 IPR001775 GspD/PilQ family RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 PRINTS PR00811 Bacterial general secretion pathway protein D signature 414 432 2.0E-20 T 23-04-2016 IPR001775 GspD/PilQ family RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 PRINTS PR00811 Bacterial general secretion pathway protein D signature 437 450 2.0E-20 T 23-04-2016 IPR001775 GspD/PilQ family RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 PRINTS PR00811 Bacterial general secretion pathway protein D signature 292 316 2.0E-20 T 23-04-2016 IPR001775 GspD/PilQ family RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 45 449 1.7E-122 T 23-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 RBRH_RS04605 a37bd7a2638415365037b0ca2129067c 450 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 395 428 - T 23-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 RBRH_RS02690 469f04178a4ab0d5d77afc76f81ba71c 260 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 9 99 2.4E-7 T 23-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 RBRH_RS02690 469f04178a4ab0d5d77afc76f81ba71c 260 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 154 255 8.0E-32 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RBRH_RS02690 469f04178a4ab0d5d77afc76f81ba71c 260 PANTHER PTHR34108:SF1 1 258 1.2E-39 T 23-04-2016 RBRH_RS02690 469f04178a4ab0d5d77afc76f81ba71c 260 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 258 24.772 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 RBRH_RS02690 469f04178a4ab0d5d77afc76f81ba71c 260 SUPERFAMILY SSF63848 152 258 1.7E-32 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RBRH_RS02690 469f04178a4ab0d5d77afc76f81ba71c 260 Gene3D G3DSA:2.160.20.70 150 258 2.6E-39 T 23-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 RBRH_RS02690 469f04178a4ab0d5d77afc76f81ba71c 260 PANTHER PTHR34108 1 258 1.2E-39 T 23-04-2016 RBRH_RS02690 469f04178a4ab0d5d77afc76f81ba71c 260 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 257 1.2E-50 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 PANTHER PTHR33175 35 124 3.3E-50 T 23-04-2016 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 PRINTS PR01727 Prokaryotic integration host factor signature 74 89 1.6E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 PRINTS PR01727 Prokaryotic integration host factor signature 108 122 1.6E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 PRINTS PR01727 Prokaryotic integration host factor signature 92 105 1.6E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 PANTHER PTHR33175:SF2 35 124 3.3E-50 T 23-04-2016 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 SMART SM00411 35 124 6.7E-42 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 33 129 30.644 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 SUPERFAMILY SSF47729 35 124 2.21E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 Gene3D G3DSA:4.10.520.10 34 125 2.7E-36 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 80 99 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 Pfam PF00216 Bacterial DNA-binding protein 35 123 1.4E-30 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS05330 ad9b30ae0b4e1a2c12343165894e30f7 133 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 34 128 5.5E-45 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 PRINTS PR00050 Cold shock protein signature 25 34 2.6E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 PRINTS PR00050 Cold shock protein signature 40 58 2.6E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 PRINTS PR00050 Cold shock protein signature 4 19 2.6E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 Gene3D G3DSA:2.40.50.140 1 65 1.5E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 PANTHER PTHR11544 1 67 1.6E-41 T 23-04-2016 RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 SMART SM00357 3 67 5.0E-33 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 SUPERFAMILY SSF50249 1 65 5.36E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 4.6E-32 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 67 1.4E-34 T 23-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 RBRH_RS02225 d3a4d1574766671b08dc42a55e5f75c9 68 PIRSF PIRSF002599 1 68 2.8E-25 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 SUPERFAMILY SSF55424 353 475 8.08E-41 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 Gene3D G3DSA:3.50.50.60 152 344 2.2E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 Gene3D G3DSA:3.50.50.60 2 151 1.9E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 2.0E-36 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 SUPERFAMILY SSF51905 2 348 4.57E-66 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 289 1.7E-78 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 1.7E-78 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 1.7E-78 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 1.7E-78 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.7E-78 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 1.7E-78 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 1.7E-78 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 1.7E-78 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 159 1.7E-78 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 338 2.6E-73 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 476 1.0E-170 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PIRSF PIRSF000350 1 475 3.8E-88 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PANTHER PTHR22912 1 127 7.8E-228 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PANTHER PTHR22912 145 469 7.8E-228 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 Gene3D G3DSA:3.30.390.30 345 473 4.0E-49 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PANTHER PTHR22912:SF131 1 127 7.8E-228 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PANTHER PTHR22912:SF131 145 469 7.8E-228 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 8.8E-45 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 8.8E-45 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 290 8.8E-45 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 8.8E-45 T 23-04-2016 RBRH_RS06265 ef541fb7ad5cfaf0b96ccc429b7b3025 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.8E-45 T 23-04-2016 RBRH_RS11550 636ac9a1507a21cc8d77a6b82af5494d 463 SMART SM00729 54 278 1.3E-46 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS11550 636ac9a1507a21cc8d77a6b82af5494d 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 463 2.9E-182 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 RBRH_RS11550 636ac9a1507a21cc8d77a6b82af5494d 463 PANTHER PTHR13932:SF6 1 457 3.3E-208 T 23-04-2016 RBRH_RS11550 636ac9a1507a21cc8d77a6b82af5494d 463 Gene3D G3DSA:3.80.30.20 56 265 1.4E-28 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RBRH_RS11550 636ac9a1507a21cc8d77a6b82af5494d 463 PIRSF PIRSF000167 3 460 7.5E-163 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 RBRH_RS11550 636ac9a1507a21cc8d77a6b82af5494d 463 SUPERFAMILY SSF102114 8 449 1.02E-131 T 23-04-2016 RBRH_RS11550 636ac9a1507a21cc8d77a6b82af5494d 463 PANTHER PTHR13932 1 457 3.3E-208 T 23-04-2016 RBRH_RS11550 636ac9a1507a21cc8d77a6b82af5494d 463 Pfam PF04055 Radical SAM superfamily 59 233 5.2E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS11550 636ac9a1507a21cc8d77a6b82af5494d 463 Pfam PF06969 HemN C-terminal domain 369 437 4.0E-8 T 23-04-2016 IPR010723 HemN, C-terminal RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 SUPERFAMILY SSF52317 2 187 3.06E-56 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 5.0E-80 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 Gene3D G3DSA:3.40.50.880 2 187 4.0E-68 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.1E-13 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.1E-13 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.1E-13 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.2E-34 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.2E-34 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.2E-34 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00097 Anthranilate synthase component II signature 164 177 2.2E-34 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.2E-34 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.2E-34 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 Pfam PF00117 Glutamine amidotransferase class-I 4 186 6.4E-54 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PANTHER PTHR11922:SF7 1 185 2.3E-92 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PANTHER PTHR11922 1 185 2.3E-92 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 4.1E-6 T 23-04-2016 RBRH_RS05060 b2fe1fb6ecc93d566efd7177a5a5bcc2 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 4.1E-6 T 23-04-2016 RBRH_RS07870 f31ab6adbeef26a1513efc0a9006fbde 190 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 20 175 8.2E-59 T 23-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria RBRH_RS07870 f31ab6adbeef26a1513efc0a9006fbde 190 Pfam PF03350 Uncharacterized protein family, UPF0114 23 139 3.4E-38 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 RBRH_RS07870 f31ab6adbeef26a1513efc0a9006fbde 190 PANTHER PTHR38596 1 184 6.4E-75 T 23-04-2016 RBRH_RS07870 f31ab6adbeef26a1513efc0a9006fbde 190 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 179 89.118 T 23-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 RBRH_RS07870 f31ab6adbeef26a1513efc0a9006fbde 190 PANTHER PTHR38596:SF1 1 184 6.4E-75 T 23-04-2016 RBRH_RS09780 6bcb534d2bb1c9c3ba9ee6195df9dfa6 262 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 74 261 2.2E-58 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RBRH_RS09780 6bcb534d2bb1c9c3ba9ee6195df9dfa6 262 Pfam PF02390 Putative methyltransferase 87 257 3.7E-56 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RBRH_RS09780 6bcb534d2bb1c9c3ba9ee6195df9dfa6 262 Gene3D G3DSA:3.40.50.150 81 244 3.6E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS09780 6bcb534d2bb1c9c3ba9ee6195df9dfa6 262 PANTHER PTHR23417:SF14 39 262 1.9E-77 T 23-04-2016 RBRH_RS09780 6bcb534d2bb1c9c3ba9ee6195df9dfa6 262 SUPERFAMILY SSF53335 41 261 8.6E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS09780 6bcb534d2bb1c9c3ba9ee6195df9dfa6 262 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 47 262 30.965 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RBRH_RS09780 6bcb534d2bb1c9c3ba9ee6195df9dfa6 262 PANTHER PTHR23417 39 262 1.9E-77 T 23-04-2016 RBRH_RS04375 255c5ba55f67b394498ee7f31f431d4f 156 SUPERFAMILY SSF47973 2 149 8.24E-62 T 23-04-2016 IPR023798 Ribosomal protein S7 domain RBRH_RS04375 255c5ba55f67b394498ee7f31f431d4f 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 6.1E-65 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RBRH_RS04375 255c5ba55f67b394498ee7f31f431d4f 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 RBRH_RS04375 255c5ba55f67b394498ee7f31f431d4f 156 PIRSF PIRSF002122 3 156 2.6E-59 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RBRH_RS04375 255c5ba55f67b394498ee7f31f431d4f 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.4E-66 T 23-04-2016 IPR023798 Ribosomal protein S7 domain RBRH_RS04375 255c5ba55f67b394498ee7f31f431d4f 156 PANTHER PTHR11205 1 156 3.2E-87 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RBRH_RS04375 255c5ba55f67b394498ee7f31f431d4f 156 Gene3D G3DSA:1.10.455.10 7 156 5.6E-65 T 23-04-2016 IPR023798 Ribosomal protein S7 domain RBRH_RS04375 255c5ba55f67b394498ee7f31f431d4f 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.137 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 SUPERFAMILY SSF54980 399 514 5.76E-27 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 6.9E-55 T 23-04-2016 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 Pfam PF00679 Elongation factor G C-terminus 398 477 1.4E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 SUPERFAMILY SSF50447 152 300 7.07E-33 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 SUPERFAMILY SSF54980 303 388 2.25E-12 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 Gene3D G3DSA:3.30.70.870 305 400 1.5E-38 T 23-04-2016 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 SUPERFAMILY SSF52540 3 206 4.71E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 PANTHER PTHR23115 5 603 1.7E-282 T 23-04-2016 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 Gene3D G3DSA:3.30.70.240 401 479 9.7E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 PANTHER PTHR23115:SF14 5 603 1.7E-282 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 Gene3D G3DSA:2.40.30.10 205 304 1.2E-25 T 23-04-2016 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 Gene3D G3DSA:3.40.50.300 4 204 6.0E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 600 2.6E-289 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 Pfam PF03144 Elongation factor Tu domain 2 219 290 8.5E-10 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.8E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 154 2.7E-24 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS06250 a5b928360b66cf701741e5d49116d80d 608 Gene3D G3DSA:2.40.50.250 484 578 5.8E-41 T 23-04-2016 RBRH_RS06570 6bdc4574cd3384b72f2a9da8e3d6fcc6 107 Gene3D G3DSA:3.10.20.280 1 86 1.1E-34 T 23-04-2016 IPR005346 RnfH protein RBRH_RS06570 6bdc4574cd3384b72f2a9da8e3d6fcc6 107 Hamap MF_00460 Protein RnfH [rnfH]. 2 92 25.547 T 23-04-2016 IPR005346 RnfH protein RBRH_RS06570 6bdc4574cd3384b72f2a9da8e3d6fcc6 107 SUPERFAMILY SSF54285 1 76 1.83E-25 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RBRH_RS06570 6bdc4574cd3384b72f2a9da8e3d6fcc6 107 PANTHER PTHR37483:SF1 1 104 1.7E-33 T 23-04-2016 RBRH_RS06570 6bdc4574cd3384b72f2a9da8e3d6fcc6 107 Pfam PF03658 RnfH family Ubiquitin 2 84 9.9E-34 T 23-04-2016 IPR005346 RnfH protein RBRH_RS06570 6bdc4574cd3384b72f2a9da8e3d6fcc6 107 PANTHER PTHR37483 1 104 1.7E-33 T 23-04-2016 RBRH_RS03780 835cc1eb28c3374147c33573e7dff444 293 Gene3D G3DSA:3.90.550.10 4 275 8.5E-68 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS03780 835cc1eb28c3374147c33573e7dff444 293 Pfam PF00483 Nucleotidyl transferase 11 258 1.9E-28 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RBRH_RS03780 835cc1eb28c3374147c33573e7dff444 293 PANTHER PTHR22572 6 285 2.6E-102 T 23-04-2016 RBRH_RS03780 835cc1eb28c3374147c33573e7dff444 293 SUPERFAMILY SSF53448 4 276 2.17E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS03780 835cc1eb28c3374147c33573e7dff444 293 PANTHER PTHR22572:SF14 6 285 2.6E-102 T 23-04-2016 RBRH_RS03780 835cc1eb28c3374147c33573e7dff444 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 265 6.6E-116 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 SUPERFAMILY SSF81624 2 145 9.03E-38 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 1.3E-33 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 SUPERFAMILY SSF57716 224 275 1.4E-15 T 23-04-2016 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 Gene3D G3DSA:3.20.190.10 2 136 7.4E-40 T 23-04-2016 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 PANTHER PTHR22993 1 276 3.9E-113 T 23-04-2016 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 136 225 1.0E-19 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 Pfam PF06827 Zinc finger found in FPG and IleRS 250 275 4.5E-8 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 PANTHER PTHR22993:SF15 1 276 3.9E-113 T 23-04-2016 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 275 6.4E-83 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 SMART SM01232 136 228 8.9E-43 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 SUPERFAMILY SSF46946 137 228 9.42E-26 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 276 41.579 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 Gene3D G3DSA:1.10.8.50 137 276 1.3E-45 T 23-04-2016 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 ProSitePatterns PS01242 Zinc finger FPG-type signature. 251 275 - T 23-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 RBRH_RS11050 ebea5585c02599ed6b328b824d50b73f 276 SMART SM00898 2 118 9.2E-49 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RBRH_RS05100 ccc1e7a173797c4865c31e81b687a7fb 263 PANTHER PTHR11941:SF76 3 260 1.7E-96 T 23-04-2016 RBRH_RS05100 ccc1e7a173797c4865c31e81b687a7fb 263 SUPERFAMILY SSF52096 2 262 1.35E-82 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS05100 ccc1e7a173797c4865c31e81b687a7fb 263 Gene3D G3DSA:3.90.226.10 1 203 1.4E-64 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS05100 ccc1e7a173797c4865c31e81b687a7fb 263 Gene3D G3DSA:1.10.12.10 205 262 1.9E-20 T 23-04-2016 IPR014748 Crontonase, C-terminal RBRH_RS05100 ccc1e7a173797c4865c31e81b687a7fb 263 PANTHER PTHR11941 3 260 1.7E-96 T 23-04-2016 RBRH_RS05100 ccc1e7a173797c4865c31e81b687a7fb 263 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 11 262 2.2E-117 T 23-04-2016 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18|UniPathway: UPA00930 RBRH_RS05100 ccc1e7a173797c4865c31e81b687a7fb 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 262 1.7E-66 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RBRH_RS10070 a94fd299dc21b40b1cb75340b57b6de9 101 Gene3D G3DSA:3.50.50.60 10 94 1.9E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS10070 a94fd299dc21b40b1cb75340b57b6de9 101 SUPERFAMILY SSF51905 6 94 4.33E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS10070 a94fd299dc21b40b1cb75340b57b6de9 101 PANTHER PTHR13789 1 94 1.9E-17 T 23-04-2016 RBRH_RS10070 a94fd299dc21b40b1cb75340b57b6de9 101 PANTHER PTHR13789:SF219 1 94 1.9E-17 T 23-04-2016 RBRH_RS11260 6e1ed446120795bcec2c60c1c57f78e7 140 PANTHER PTHR12231:SF138 27 135 7.0E-23 T 23-04-2016 RBRH_RS11260 6e1ed446120795bcec2c60c1c57f78e7 140 PANTHER PTHR12231 27 135 7.0E-23 T 23-04-2016 RBRH_RS11260 6e1ed446120795bcec2c60c1c57f78e7 140 SUPERFAMILY SSF52821 12 135 1.2E-32 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS11260 6e1ed446120795bcec2c60c1c57f78e7 140 Pfam PF00581 Rhodanese-like domain 36 127 1.4E-18 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS11260 6e1ed446120795bcec2c60c1c57f78e7 140 Gene3D G3DSA:3.40.250.10 20 135 1.5E-31 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS11260 6e1ed446120795bcec2c60c1c57f78e7 140 SMART SM00450 35 132 2.4E-20 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS08975 1fc8bbd0473884b11103258eae93533f 270 SUPERFAMILY SSF144010 12 260 3.66E-79 T 23-04-2016 RBRH_RS08975 1fc8bbd0473884b11103258eae93533f 270 PANTHER PTHR21712 14 253 2.3E-45 T 23-04-2016 RBRH_RS08975 1fc8bbd0473884b11103258eae93533f 270 TIGRFAM TIGR01916 F420_cofE: coenzyme F420-0:L-glutamate ligase 12 259 3.4E-84 T 23-04-2016 IPR008225 Coenzyme F420:L-glutamate ligase GO:0043773|GO:0046872|GO:0051188 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199|UniPathway: UPA00071 RBRH_RS08975 1fc8bbd0473884b11103258eae93533f 270 PANTHER PTHR21712:SF30 14 253 2.3E-45 T 23-04-2016 RBRH_RS08975 1fc8bbd0473884b11103258eae93533f 270 Gene3D G3DSA:3.90.1660.10 65 149 9.5E-34 T 23-04-2016 RBRH_RS08975 1fc8bbd0473884b11103258eae93533f 270 Pfam PF01996 F420-0:Gamma-glutamyl ligase 19 236 1.1E-64 T 23-04-2016 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199|UniPathway: UPA00071 RBRH_RS08975 1fc8bbd0473884b11103258eae93533f 270 Gene3D G3DSA:3.30.1330.100 9 62 1.0E-50 T 23-04-2016 RBRH_RS08975 1fc8bbd0473884b11103258eae93533f 270 Gene3D G3DSA:3.30.1330.100 150 239 1.0E-50 T 23-04-2016 RBRH_RS08835 9489a53d9761f6d31c90e32e905592c6 136 SUPERFAMILY SSF81343 1 132 7.19E-29 T 23-04-2016 RBRH_RS08835 9489a53d9761f6d31c90e32e905592c6 136 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 9 127 1.2E-24 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RBRH_RS08835 9489a53d9761f6d31c90e32e905592c6 136 PANTHER PTHR10978 24 126 8.4E-19 T 23-04-2016 RBRH_RS08835 9489a53d9761f6d31c90e32e905592c6 136 Gene3D G3DSA:1.20.1300.10 2 133 8.3E-37 T 23-04-2016 RBRH_RS08835 9489a53d9761f6d31c90e32e905592c6 136 PANTHER PTHR10978:SF4 24 126 8.4E-19 T 23-04-2016 RBRH_RS08835 9489a53d9761f6d31c90e32e905592c6 136 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 18 129 4.8E-34 T 23-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 RBRH_RS08835 9489a53d9761f6d31c90e32e905592c6 136 PIRSF PIRSF000178 2 133 2.1E-27 T 23-04-2016 RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 Pfam PF01546 Peptidase family M20/M25/M40 97 408 6.2E-36 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 Gene3D G3DSA:3.30.70.360 213 309 1.3E-22 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 PANTHER PTHR11014:SF80 34 416 8.1E-133 T 23-04-2016 RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 Gene3D G3DSA:3.40.630.10 353 411 2.7E-61 T 23-04-2016 RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 Gene3D G3DSA:3.40.630.10 30 212 2.7E-61 T 23-04-2016 RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 36 408 1.8E-113 T 23-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 Pfam PF07687 Peptidase dimerisation domain 200 309 7.7E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 PANTHER PTHR11014 34 416 8.1E-133 T 23-04-2016 RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 SUPERFAMILY SSF53187 330 411 1.54E-55 T 23-04-2016 RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 SUPERFAMILY SSF53187 31 203 1.54E-55 T 23-04-2016 RBRH_RS07215 24a80b3757efc452a5906f43750806f9 417 SUPERFAMILY SSF55031 204 309 6.28E-20 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain RBRH_RS08370 910eb4956f1068a1b20b002fa789001a 696 Pfam PF01432 Peptidase family M3 227 690 9.7E-146 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RBRH_RS08370 910eb4956f1068a1b20b002fa789001a 696 PANTHER PTHR11804:SF8 4 691 5.2E-285 T 23-04-2016 RBRH_RS08370 910eb4956f1068a1b20b002fa789001a 696 Gene3D G3DSA:1.10.1370.10 145 358 2.9E-135 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RBRH_RS08370 910eb4956f1068a1b20b002fa789001a 696 Gene3D G3DSA:1.10.1370.10 513 691 2.9E-135 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RBRH_RS08370 910eb4956f1068a1b20b002fa789001a 696 Gene3D G3DSA:3.40.390.10 369 512 4.7E-59 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RBRH_RS08370 910eb4956f1068a1b20b002fa789001a 696 PANTHER PTHR11804 4 691 5.2E-285 T 23-04-2016 RBRH_RS08370 910eb4956f1068a1b20b002fa789001a 696 SUPERFAMILY SSF55486 7 690 1.15E-192 T 23-04-2016 RBRH_RS08370 910eb4956f1068a1b20b002fa789001a 696 Gene3D G3DSA:1.20.1050.40 17 143 1.5E-17 T 23-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RBRH_RS03090 240daace8a48bdcae504793665aa18bb 129 PANTHER PTHR15680 2 123 5.5E-53 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03090 240daace8a48bdcae504793665aa18bb 129 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 118 29.307 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03090 240daace8a48bdcae504793665aa18bb 129 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 7.6E-47 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03090 240daace8a48bdcae504793665aa18bb 129 Pfam PF01245 Ribosomal protein L19 3 117 2.0E-45 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03090 240daace8a48bdcae504793665aa18bb 129 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03090 240daace8a48bdcae504793665aa18bb 129 PRINTS PR00061 Ribosomal protein L19 signature 38 67 3.2E-35 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03090 240daace8a48bdcae504793665aa18bb 129 PRINTS PR00061 Ribosomal protein L19 signature 8 37 3.2E-35 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03090 240daace8a48bdcae504793665aa18bb 129 PRINTS PR00061 Ribosomal protein L19 signature 92 117 3.2E-35 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03090 240daace8a48bdcae504793665aa18bb 129 SUPERFAMILY SSF50104 10 119 6.62E-44 T 23-04-2016 IPR008991 Translation protein SH3-like domain RBRH_RS03090 240daace8a48bdcae504793665aa18bb 129 PIRSF PIRSF002191 1 129 4.5E-51 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 Gene3D G3DSA:3.40.50.2300 533 653 1.6E-28 T 23-04-2016 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 513 2.0E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 Gene3D G3DSA:3.40.50.2300 4 129 4.9E-22 T 23-04-2016 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SUPERFAMILY SSF55874 339 514 2.49E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SMART SM00448 536 649 2.7E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SMART SM00448 5 118 1.3E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 493 4.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 4.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 4.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 Pfam PF08447 PAS fold 166 250 1.3E-12 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SMART SM00086 215 257 3.7E-5 T 23-04-2016 IPR001610 PAC motif RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 Gene3D G3DSA:1.10.287.130 276 346 1.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 Gene3D G3DSA:3.30.450.20 135 255 7.9E-29 T 23-04-2016 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 PANTHER PTHR24423:SF522 126 652 2.6E-135 T 23-04-2016 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SUPERFAMILY SSF52172 536 652 7.83E-30 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SUPERFAMILY SSF52172 4 129 1.29E-22 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 Gene3D G3DSA:3.30.565.10 352 516 1.0E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SMART SM00091 142 208 7.6E-5 T 23-04-2016 IPR000014 PAS domain RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 PANTHER PTHR24423 126 652 2.6E-135 T 23-04-2016 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 Pfam PF00072 Response regulator receiver domain 7 109 1.1E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 Pfam PF00072 Response regulator receiver domain 538 645 3.1E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 Pfam PF00512 His Kinase A (phospho-acceptor) domain 284 348 2.4E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SUPERFAMILY SSF55785 147 260 3.7E-21 T 23-04-2016 IPR000014 PAS domain RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SUPERFAMILY SSF47384 267 351 6.67E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SMART SM00387 396 516 9.6E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 261 7.5E-11 T 23-04-2016 IPR000014 PAS domain RBRH_RS07565 b5179499648e79263febb25db4587a9a 667 SMART SM00388 284 350 1.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 2.5E-41 T 23-04-2016 RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PANTHER PTHR24319:SF23 1 253 1.1E-58 T 23-04-2016 RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 Gene3D G3DSA:3.40.50.720 5 254 5.0E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 SUPERFAMILY SSF51735 7 254 2.34E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 9.8E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 9.8E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 9.8E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PANTHER PTHR24319 1 253 1.1E-58 T 23-04-2016 RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS09220 966bba178941ef244b4878d63fee9e58 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 Gene3D G3DSA:3.40.190.10 111 208 1.9E-19 T 23-04-2016 RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 PANTHER PTHR30126:SF3 24 337 2.2E-68 T 23-04-2016 RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 Pfam PF03466 LysR substrate binding domain 110 323 2.1E-24 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 SUPERFAMILY SSF46785 23 131 4.57E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 85 2.6E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 SUPERFAMILY SSF53850 111 324 4.07E-29 T 23-04-2016 RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 PANTHER PTHR30126 24 337 2.2E-68 T 23-04-2016 RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 Gene3D G3DSA:1.10.10.10 24 110 2.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 62 73 1.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 62 1.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06770 b27bf8ab26015e4e21f568e3ae1cbd08 345 Gene3D G3DSA:3.40.190.10 209 291 1.0E-6 T 23-04-2016 RBRH_RS10155 5dd421ce155be8b2269a54d9f3fa593c 219 Gene3D G3DSA:3.40.50.2300 1 121 5.3E-38 T 23-04-2016 RBRH_RS10155 5dd421ce155be8b2269a54d9f3fa593c 219 PANTHER PTHR26402 1 216 1.4E-99 T 23-04-2016 RBRH_RS10155 5dd421ce155be8b2269a54d9f3fa593c 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 1.1E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS10155 5dd421ce155be8b2269a54d9f3fa593c 219 Pfam PF00072 Response regulator receiver domain 3 111 5.6E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS10155 5dd421ce155be8b2269a54d9f3fa593c 219 SUPERFAMILY SSF52172 1 174 1.81E-38 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS10155 5dd421ce155be8b2269a54d9f3fa593c 219 SMART SM00448 1 112 1.7E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS10155 5dd421ce155be8b2269a54d9f3fa593c 219 PANTHER PTHR26402:SF279 1 216 1.4E-99 T 23-04-2016 RBRH_RS10155 5dd421ce155be8b2269a54d9f3fa593c 219 Gene3D G3DSA:1.10.10.10 123 216 1.6E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10155 5dd421ce155be8b2269a54d9f3fa593c 219 SMART SM00862 145 216 1.5E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 PANTHER PTHR22976 25 334 7.4E-150 T 23-04-2016 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 PIRSF PIRSF001619 6 337 1.7E-126 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 PANTHER PTHR22976:SF1 25 334 7.4E-150 T 23-04-2016 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 238 327 4.9E-16 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 Gene3D G3DSA:3.20.20.70 23 329 7.8E-98 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 SMART SM00729 61 273 1.1E-37 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 SUPERFAMILY SSF102114 23 328 3.79E-88 T 23-04-2016 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 SMART SM00876 238 330 1.7E-36 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 TIGRFAM TIGR00433 bioB: biotin synthase 33 328 8.4E-119 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 Pfam PF04055 Radical SAM superfamily 68 224 6.4E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS06755 e654babd4c6a05ac140f6d0ec3a744bf 344 Hamap MF_01694 Biotin synthase [bioB]. 23 331 40.867 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RBRH_RS09560 84a2f4772d75e0c105692b4f63104971 252 PANTHER PTHR10859:SF99 5 103 2.2E-25 T 23-04-2016 RBRH_RS09560 84a2f4772d75e0c105692b4f63104971 252 PANTHER PTHR10859 5 103 2.2E-25 T 23-04-2016 RBRH_RS09560 84a2f4772d75e0c105692b4f63104971 252 Gene3D G3DSA:3.90.550.10 8 109 5.2E-16 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS09560 84a2f4772d75e0c105692b4f63104971 252 SUPERFAMILY SSF53448 6 197 3.28E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS09560 84a2f4772d75e0c105692b4f63104971 252 Pfam PF00535 Glycosyl transferase family 2 9 103 1.1E-17 T 23-04-2016 IPR001173 Glycosyltransferase 2-like RBRH_RS02505 a105aa1a93d9e360b58c6cdc375ff149 285 Pfam PF00005 ABC transporter 29 177 3.8E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS02505 a105aa1a93d9e360b58c6cdc375ff149 285 SMART SM00382 38 226 4.4E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS02505 a105aa1a93d9e360b58c6cdc375ff149 285 SUPERFAMILY SSF52540 14 239 6.92E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02505 a105aa1a93d9e360b58c6cdc375ff149 285 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS02505 a105aa1a93d9e360b58c6cdc375ff149 285 PANTHER PTHR24220 15 256 5.3E-60 T 23-04-2016 RBRH_RS02505 a105aa1a93d9e360b58c6cdc375ff149 285 PANTHER PTHR24220:SF266 15 256 5.3E-60 T 23-04-2016 RBRH_RS02505 a105aa1a93d9e360b58c6cdc375ff149 285 Gene3D G3DSA:3.40.50.300 13 239 9.0E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04340 a21a927b294dab69b9102eed19131a28 126 Gene3D G3DSA:3.30.1390.10 53 126 3.9E-32 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RBRH_RS04340 a21a927b294dab69b9102eed19131a28 126 Gene3D G3DSA:1.20.5.710 2 52 6.7E-22 T 23-04-2016 RBRH_RS04340 a21a927b294dab69b9102eed19131a28 126 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 126 4.7E-29 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RBRH_RS04340 a21a927b294dab69b9102eed19131a28 126 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 126 1.6E-45 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04340 a21a927b294dab69b9102eed19131a28 126 SUPERFAMILY SSF48300 4 62 5.89E-15 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04340 a21a927b294dab69b9102eed19131a28 126 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 5.0E-17 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04340 a21a927b294dab69b9102eed19131a28 126 SUPERFAMILY SSF54736 55 126 2.09E-23 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RBRH_RS04340 a21a927b294dab69b9102eed19131a28 126 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 126 24.289 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04340 a21a927b294dab69b9102eed19131a28 126 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 100 2.0E-13 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PANTHER PTHR11670 1 307 2.0E-287 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PANTHER PTHR11670 327 468 2.0E-287 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 467 1.7E-235 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 469 59.983 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 Gene3D G3DSA:3.30.499.10 335 468 2.9E-59 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 Gene3D G3DSA:3.30.499.10 293 303 2.9E-59 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 Gene3D G3DSA:3.30.499.10 1 157 8.8E-20 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PRINTS PR00415 Aconitase family signature 209 222 1.6E-46 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PRINTS PR00415 Aconitase family signature 108 116 1.6E-46 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PRINTS PR00415 Aconitase family signature 343 354 1.6E-46 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PRINTS PR00415 Aconitase family signature 133 148 1.6E-46 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PRINTS PR00415 Aconitase family signature 82 95 1.6E-46 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PRINTS PR00415 Aconitase family signature 195 208 1.6E-46 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PRINTS PR00415 Aconitase family signature 286 300 1.6E-46 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PRINTS PR00415 Aconitase family signature 119 132 1.6E-46 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PRINTS PR00415 Aconitase family signature 402 415 1.6E-46 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 SUPERFAMILY SSF53732 1 468 9.68E-162 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PANTHER PTHR11670:SF38 1 307 2.0E-287 T 23-04-2016 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 PANTHER PTHR11670:SF38 327 468 2.0E-287 T 23-04-2016 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 460 4.2E-153 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08805 db6a5b2e469ff4c8b287573857e39369 469 Gene3D G3DSA:3.40.1060.10 167 281 2.3E-39 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS10830 2d5368ab681c9cc29d38fc5a61e6339b 121 PANTHER PTHR34404:SF2 2 59 8.5E-19 T 23-04-2016 RBRH_RS10830 2d5368ab681c9cc29d38fc5a61e6339b 121 SMART SM00834 1 42 2.4E-18 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RBRH_RS10830 2d5368ab681c9cc29d38fc5a61e6339b 121 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 6.5E-22 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RBRH_RS10830 2d5368ab681c9cc29d38fc5a61e6339b 121 PANTHER PTHR34404 2 59 8.5E-19 T 23-04-2016 RBRH_RS10830 2d5368ab681c9cc29d38fc5a61e6339b 121 Pfam PF09723 Zinc ribbon domain 1 41 5.4E-16 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RBRH_RS10610 89095cda5ab1b6459f9efd50f8cfc136 286 PANTHER PTHR11727 1 261 4.9E-84 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RBRH_RS10610 89095cda5ab1b6459f9efd50f8cfc136 286 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 263 2.4E-77 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RBRH_RS10610 89095cda5ab1b6459f9efd50f8cfc136 286 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 53.99 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RBRH_RS10610 89095cda5ab1b6459f9efd50f8cfc136 286 Gene3D G3DSA:1.10.8.100 202 264 7.8E-18 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like RBRH_RS10610 89095cda5ab1b6459f9efd50f8cfc136 286 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RBRH_RS10610 89095cda5ab1b6459f9efd50f8cfc136 286 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 235 3.1E-57 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RBRH_RS10610 89095cda5ab1b6459f9efd50f8cfc136 286 SMART SM00650 25 198 1.9E-78 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RBRH_RS10610 89095cda5ab1b6459f9efd50f8cfc136 286 Gene3D G3DSA:3.40.50.150 3 198 7.6E-68 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS10610 89095cda5ab1b6459f9efd50f8cfc136 286 SUPERFAMILY SSF53335 6 264 1.14E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS03945 19afc05859ddcbd20b0efad7345ec253 148 Pfam PF13262 Protein of unknown function (DUF4054) 14 121 9.1E-26 T 23-04-2016 IPR025127 Protein of unknown function DUF4054 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 11 277 5.5E-117 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 Gene3D G3DSA:3.40.50.620 11 75 4.8E-40 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 Gene3D G3DSA:3.40.50.620 189 238 4.8E-40 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 12 251 3.8E-40 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 PANTHER PTHR11451 1 255 2.5E-88 T 23-04-2016 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 SUPERFAMILY SSF52374 11 284 6.44E-82 T 23-04-2016 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 203 211 1.1E-12 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 28 39 1.1E-12 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 187 197 1.1E-12 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 43 56 1.1E-12 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 14 26 1.1E-12 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 11 302 42.976 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 Gene3D G3DSA:3.90.800.10 76 187 5.2E-18 T 23-04-2016 RBRH_RS09325 0b4d9a4d780a2685ca2794dfce4fbfd1 302 PANTHER PTHR11451:SF35 1 255 2.5E-88 T 23-04-2016 RBRH_RS05225 15f953286914996c77f9ca415bcfd252 202 Pfam PF03358 NADPH-dependent FMN reductase 13 140 1.1E-6 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RBRH_RS05225 15f953286914996c77f9ca415bcfd252 202 PANTHER PTHR30546 1 192 4.5E-66 T 23-04-2016 RBRH_RS05225 15f953286914996c77f9ca415bcfd252 202 Gene3D G3DSA:3.40.50.360 1 199 3.4E-65 T 23-04-2016 IPR029039 Flavoprotein-like domain RBRH_RS05225 15f953286914996c77f9ca415bcfd252 202 SUPERFAMILY SSF52218 1 197 4.89E-57 T 23-04-2016 IPR029039 Flavoprotein-like domain RBRH_RS05225 15f953286914996c77f9ca415bcfd252 202 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RBRH_RS05225 15f953286914996c77f9ca415bcfd252 202 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 194 1.5E-42 T 23-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RBRH_RS08880 0180978d9fc83a97657bf463abe453ad 354 SUPERFAMILY SSF50129 1 182 3.8E-51 T 23-04-2016 IPR011032 GroES-like RBRH_RS08880 0180978d9fc83a97657bf463abe453ad 354 Gene3D G3DSA:3.90.180.10 1 175 5.9E-56 T 23-04-2016 IPR011032 GroES-like RBRH_RS08880 0180978d9fc83a97657bf463abe453ad 354 PANTHER PTHR11695 12 351 3.3E-123 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RBRH_RS08880 0180978d9fc83a97657bf463abe453ad 354 Gene3D G3DSA:3.40.50.720 176 295 1.6E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS08880 0180978d9fc83a97657bf463abe453ad 354 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 5.6E-33 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RBRH_RS08880 0180978d9fc83a97657bf463abe453ad 354 Pfam PF00107 Zinc-binding dehydrogenase 184 310 2.2E-28 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RBRH_RS08880 0180978d9fc83a97657bf463abe453ad 354 SMART SM00829 8 326 7.0E-4 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RBRH_RS08880 0180978d9fc83a97657bf463abe453ad 354 SUPERFAMILY SSF51735 150 307 8.15E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS08880 0180978d9fc83a97657bf463abe453ad 354 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 70 84 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RBRH_RS08880 0180978d9fc83a97657bf463abe453ad 354 PANTHER PTHR11695:SF38 12 351 3.3E-123 T 23-04-2016 RBRH_RS00405 a12413ccad557ca8e8706b9dfc26c586 435 PANTHER PTHR13748 5 332 5.2E-172 T 23-04-2016 RBRH_RS00405 a12413ccad557ca8e8706b9dfc26c586 435 PANTHER PTHR13748 353 393 5.2E-172 T 23-04-2016 RBRH_RS00405 a12413ccad557ca8e8706b9dfc26c586 435 Gene3D G3DSA:3.40.50.300 5 230 1.9E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00405 a12413ccad557ca8e8706b9dfc26c586 435 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 210 6.8E-55 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RBRH_RS00405 a12413ccad557ca8e8706b9dfc26c586 435 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 258 379 3.3E-29 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RBRH_RS00405 a12413ccad557ca8e8706b9dfc26c586 435 SMART SM00833 257 379 2.6E-49 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RBRH_RS00405 a12413ccad557ca8e8706b9dfc26c586 435 SUPERFAMILY SSF52540 5 306 1.42E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00405 a12413ccad557ca8e8706b9dfc26c586 435 PANTHER PTHR13748:SF4 5 332 5.2E-172 T 23-04-2016 RBRH_RS00405 a12413ccad557ca8e8706b9dfc26c586 435 PANTHER PTHR13748:SF4 353 393 5.2E-172 T 23-04-2016 RBRH_RS00405 a12413ccad557ca8e8706b9dfc26c586 435 Gene3D G3DSA:3.30.1220.10 244 379 4.1E-16 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RBRH_RS03300 9ef2f68f6e164d0d5247823c0275e0cd 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 15.859 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RBRH_RS03300 9ef2f68f6e164d0d5247823c0275e0cd 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.0E-19 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RBRH_RS03300 9ef2f68f6e164d0d5247823c0275e0cd 59 Pfam PF01783 Ribosomal L32p protein family 2 55 1.1E-17 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RBRH_RS03300 9ef2f68f6e164d0d5247823c0275e0cd 59 PANTHER PTHR35534 1 59 4.4E-23 T 23-04-2016 RBRH_RS03300 9ef2f68f6e164d0d5247823c0275e0cd 59 SUPERFAMILY SSF57829 2 55 1.4E-16 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RBRH_RS02160 12d31ee4831266e45a905465ee01b78e 271 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 5 268 41.547 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RBRH_RS02160 12d31ee4831266e45a905465ee01b78e 271 PANTHER PTHR21485 197 270 3.9E-98 T 23-04-2016 RBRH_RS02160 12d31ee4831266e45a905465ee01b78e 271 PANTHER PTHR21485 7 176 3.9E-98 T 23-04-2016 RBRH_RS02160 12d31ee4831266e45a905465ee01b78e 271 PANTHER PTHR21485:SF4 197 270 3.9E-98 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RBRH_RS02160 12d31ee4831266e45a905465ee01b78e 271 PANTHER PTHR21485:SF4 7 176 3.9E-98 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RBRH_RS02160 12d31ee4831266e45a905465ee01b78e 271 SUPERFAMILY SSF53448 7 267 3.18E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS02160 12d31ee4831266e45a905465ee01b78e 271 Gene3D G3DSA:3.90.550.10 7 270 2.7E-78 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS02160 12d31ee4831266e45a905465ee01b78e 271 Pfam PF02348 Cytidylyltransferase 8 241 2.8E-55 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RBRH_RS02160 12d31ee4831266e45a905465ee01b78e 271 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 7 260 2.4E-83 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RBRH_RS07875 0f924a439de0fbc1874ccfc48820cad5 507 SUPERFAMILY SSF117457 318 488 6.02E-63 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RBRH_RS07875 0f924a439de0fbc1874ccfc48820cad5 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 4.8E-64 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RBRH_RS07875 0f924a439de0fbc1874ccfc48820cad5 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 7.8E-101 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RBRH_RS07875 0f924a439de0fbc1874ccfc48820cad5 507 PANTHER PTHR30389 1 507 6.4E-302 T 23-04-2016 RBRH_RS07875 0f924a439de0fbc1874ccfc48820cad5 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 327 489 3.2E-48 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RBRH_RS07875 0f924a439de0fbc1874ccfc48820cad5 507 PIRSF PIRSF001394 1 507 4.4E-216 T 23-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RBRH_RS07875 0f924a439de0fbc1874ccfc48820cad5 507 Pfam PF05683 Fumarase C-terminus 289 490 1.1E-82 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RBRH_RS07875 0f924a439de0fbc1874ccfc48820cad5 507 PANTHER PTHR30389:SF1 1 507 6.4E-302 T 23-04-2016 RBRH_RS07875 0f924a439de0fbc1874ccfc48820cad5 507 Gene3D G3DSA:3.20.130.10 303 489 8.5E-73 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 Pfam PF00183 Hsp90 protein 216 628 1.2E-128 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 PANTHER PTHR11528 4 627 0.0 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 628 32.89 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 SUPERFAMILY SSF55874 3 215 4.98E-65 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 PIRSF PIRSF002583 1 632 8.6E-213 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 SUPERFAMILY SSF54211 233 492 7.43E-98 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 PRINTS PR00775 90kDa heat shock protein signature 119 141 1.4E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 PRINTS PR00775 90kDa heat shock protein signature 92 109 1.4E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 PRINTS PR00775 90kDa heat shock protein signature 74 91 1.4E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 PRINTS PR00775 90kDa heat shock protein signature 25 47 1.4E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 PRINTS PR00775 90kDa heat shock protein signature 189 207 1.4E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 PRINTS PR00775 90kDa heat shock protein signature 171 188 1.4E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 PRINTS PR00775 90kDa heat shock protein signature 4 24 1.4E-61 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 24 33 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 Gene3D G3DSA:3.30.565.10 4 240 9.5E-82 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 SUPERFAMILY SSF110942 517 628 2.75E-35 T 23-04-2016 RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 SMART SM00387 26 183 2.7E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 181 6.2E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09510 c40766470ee9396a273a34ef78738851 632 PANTHER PTHR11528:SF44 4 627 0.0 T 23-04-2016 RBRH_RS03695 9a72a401be532f924324d9940a2a1cbc 404 Gene3D G3DSA:3.40.50.150 108 384 1.2E-98 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS03695 9a72a401be532f924324d9940a2a1cbc 404 PANTHER PTHR10108:SF743 317 401 4.2E-117 T 23-04-2016 RBRH_RS03695 9a72a401be532f924324d9940a2a1cbc 404 PANTHER PTHR10108:SF743 39 300 4.2E-117 T 23-04-2016 RBRH_RS03695 9a72a401be532f924324d9940a2a1cbc 404 Pfam PF02353 Mycolic acid cyclopropane synthetase 109 380 2.5E-101 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS03695 9a72a401be532f924324d9940a2a1cbc 404 PIRSF PIRSF003085 2 401 1.1E-132 T 23-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 RBRH_RS03695 9a72a401be532f924324d9940a2a1cbc 404 SUPERFAMILY SSF53335 118 384 1.35E-78 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS03695 9a72a401be532f924324d9940a2a1cbc 404 PANTHER PTHR10108 317 401 4.2E-117 T 23-04-2016 RBRH_RS03695 9a72a401be532f924324d9940a2a1cbc 404 PANTHER PTHR10108 39 300 4.2E-117 T 23-04-2016 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 23 855 3.6E-234 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 Pfam PF01909 Nucleotidyltransferase domain 65 95 1.7E-4 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 PIRSF PIRSF006288 1 857 4.5E-299 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 PANTHER PTHR13734:SF45 84 676 3.2E-99 T 23-04-2016 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 SUPERFAMILY SSF55021 676 741 1.54E-8 T 23-04-2016 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 857 314.337 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 PANTHER PTHR13734 84 676 3.2E-99 T 23-04-2016 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 Gene3D G3DSA:1.10.3210.10 412 599 5.6E-25 T 23-04-2016 IPR006674 HD domain RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 Pfam PF08335 GlnD PII-uridylyltransferase 167 306 7.5E-33 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 SMART SM00471 438 585 4.8E-5 T 23-04-2016 IPR003607 HD/PDEase domain RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 SUPERFAMILY SSF81301 28 161 1.46E-22 T 23-04-2016 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 Gene3D G3DSA:3.30.460.10 65 151 1.1E-7 T 23-04-2016 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 SUPERFAMILY SSF109604 409 533 5.96E-15 T 23-04-2016 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 Pfam PF01966 HD domain 443 556 7.4E-10 T 23-04-2016 IPR006674 HD domain RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 Gene3D G3DSA:3.30.70.260 785 848 5.8E-11 T 23-04-2016 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 Gene3D G3DSA:3.30.70.260 682 731 0.001 T 23-04-2016 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 SUPERFAMILY SSF81593 170 299 1.41E-9 T 23-04-2016 RBRH_RS06425 2288ff312c70674033ae7259b36a0069 857 SUPERFAMILY SSF55021 785 838 8.74E-9 T 23-04-2016 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 9.9E-22 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.4E-15 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 Gene3D G3DSA:2.40.50.140 49 117 6.5E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 Gene3D G3DSA:1.10.720.10 1 47 1.5E-20 T 23-04-2016 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 SUPERFAMILY SSF68912 1 46 1.96E-11 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.1E-31 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 PANTHER PTHR15184:SF34 54 141 2.3E-187 T 23-04-2016 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 PANTHER PTHR15184:SF34 160 418 2.3E-187 T 23-04-2016 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 SUPERFAMILY SSF52540 90 371 4.85E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 SMART SM00382 170 349 5.5E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 SMART SM00959 5 47 1.7E-15 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 Gene3D G3DSA:3.40.50.300 131 418 7.2E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 243.264 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 SMART SM00357 52 118 1.3E-17 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 SUPERFAMILY SSF50249 49 125 1.66E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 5.0E-210 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 PANTHER PTHR15184 54 141 2.3E-187 T 23-04-2016 RBRH_RS05715 0c2b458cf937fe1b16855f40baab74db 420 PANTHER PTHR15184 160 418 2.3E-187 T 23-04-2016 RBRH_RS09080 2486bc4801a6f0cc0ad6677f6fbbf485 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 8.5E-38 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RBRH_RS09080 2486bc4801a6f0cc0ad6677f6fbbf485 119 PANTHER PTHR11058 3 119 3.3E-59 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RBRH_RS09080 2486bc4801a6f0cc0ad6677f6fbbf485 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.135 T 23-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 RBRH_RS09080 2486bc4801a6f0cc0ad6677f6fbbf485 119 PANTHER PTHR11058:SF10 3 119 3.3E-59 T 23-04-2016 RBRH_RS02890 02440b020b633114f7847c0153b98534 538 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 435 520 1.1E-28 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RBRH_RS02890 02440b020b633114f7847c0153b98534 538 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 154 323 2.0E-43 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RBRH_RS02890 02440b020b633114f7847c0153b98534 538 PANTHER PTHR11780 2 519 4.4E-218 T 23-04-2016 RBRH_RS02890 02440b020b633114f7847c0153b98534 538 PANTHER PTHR11780:SF0 2 519 4.4E-218 T 23-04-2016 RBRH_RS02890 02440b020b633114f7847c0153b98534 538 SUPERFAMILY SSF140490 431 519 6.93E-25 T 23-04-2016 RBRH_RS02890 02440b020b633114f7847c0153b98534 538 SUPERFAMILY SSF142019 104 344 2.48E-82 T 23-04-2016 RBRH_RS02890 02440b020b633114f7847c0153b98534 538 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 271 286 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RBRH_RS02890 02440b020b633114f7847c0153b98534 538 SUPERFAMILY SSF142984 347 428 5.75E-21 T 23-04-2016 RBRH_RS02890 02440b020b633114f7847c0153b98534 538 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 446 457 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RBRH_RS02890 02440b020b633114f7847c0153b98534 538 SMART SM00928 433 478 5.2E-15 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RBRH_RS05265 433694e592adf4d6ae07f01f352b590e 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 1.8E-99 T 23-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 RBRH_RS05265 433694e592adf4d6ae07f01f352b590e 213 Pfam PF01144 Coenzyme A transferase 7 201 1.5E-42 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RBRH_RS05265 433694e592adf4d6ae07f01f352b590e 213 SMART SM00882 6 202 1.6E-82 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RBRH_RS05265 433694e592adf4d6ae07f01f352b590e 213 SUPERFAMILY SSF100950 3 211 1.44E-74 T 23-04-2016 RBRH_RS05265 433694e592adf4d6ae07f01f352b590e 213 PANTHER PTHR13707 2 210 1.7E-133 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RBRH_RS05265 433694e592adf4d6ae07f01f352b590e 213 Gene3D G3DSA:3.40.810.20 3 210 1.8E-95 T 23-04-2016 RBRH_RS05265 433694e592adf4d6ae07f01f352b590e 213 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 23-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 RBRH_RS09785 3f69b123bd2692355bcf69f71ac47dab 280 PANTHER PTHR30622 2 279 1.3E-121 T 23-04-2016 RBRH_RS09785 3f69b123bd2692355bcf69f71ac47dab 280 Pfam PF02673 Bacitracin resistance protein BacA 9 265 3.4E-83 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RBRH_RS09785 3f69b123bd2692355bcf69f71ac47dab 280 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 271 18.223 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RBRH_RS09785 3f69b123bd2692355bcf69f71ac47dab 280 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 263 2.1E-74 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RBRH_RS09785 3f69b123bd2692355bcf69f71ac47dab 280 PANTHER PTHR30622:SF3 2 279 1.3E-121 T 23-04-2016 RBRH_RS08215 42704beb92f201ecbb7179f628eea883 190 PANTHER PTHR20857 1 188 1.1E-24 T 23-04-2016 RBRH_RS08215 42704beb92f201ecbb7179f628eea883 190 Gene3D G3DSA:3.20.20.70 4 189 4.3E-44 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS08215 42704beb92f201ecbb7179f628eea883 190 SUPERFAMILY SSF51391 2 189 1.29E-47 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RBRH_RS08215 42704beb92f201ecbb7179f628eea883 190 PANTHER PTHR20857:SF21 1 188 1.1E-24 T 23-04-2016 RBRH_RS08215 42704beb92f201ecbb7179f628eea883 190 Pfam PF02581 Thiamine monophosphate synthase/TENI 7 186 2.3E-39 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 Gene3D G3DSA:3.50.30.10 378 479 1.2E-36 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 Gene3D G3DSA:3.30.1490.20 9 199 1.3E-68 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 SUPERFAMILY SSF51621 469 797 4.45E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 Gene3D G3DSA:3.20.20.60 486 796 1.5E-100 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 796 7.5E-60 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 SUPERFAMILY SSF56059 9 390 7.77E-109 T 23-04-2016 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 SUPERFAMILY SSF52009 353 472 5.62E-34 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 PANTHER PTHR22931:SF7 10 800 0.0 T 23-04-2016 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 350 3.7E-117 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 PANTHER PTHR22931 10 800 0.0 T 23-04-2016 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 795 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 Pfam PF00391 PEP-utilising enzyme, mobile domain 389 460 6.0E-26 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 Gene3D G3DSA:3.30.470.20 202 362 1.8E-56 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RBRH_RS06525 fd938c57b2796e1313bf628e05dddea2 801 PIRSF PIRSF000854 5 801 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 Pfam PF07517 SecA DEAD-like domain 6 405 3.3E-134 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 SUPERFAMILY SSF81767 227 371 5.36E-44 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 827 0.0 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 SMART SM00958 228 361 2.9E-81 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 SUPERFAMILY SSF81886 920 932 3.27E-81 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 SUPERFAMILY SSF81886 632 850 3.27E-81 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 PANTHER PTHR30612 918 944 0.0 T 23-04-2016 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 PANTHER PTHR30612 5 523 0.0 T 23-04-2016 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 PANTHER PTHR30612 560 897 0.0 T 23-04-2016 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 Gene3D G3DSA:3.90.1440.10 230 371 2.4E-45 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 842 20.085 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 Pfam PF02810 SEC-C motif 924 942 1.0E-10 T 23-04-2016 IPR004027 SEC-C motif RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 ProSitePatterns PS01312 SecA family signature. 503 518 - T 23-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 Gene3D G3DSA:3.40.50.300 420 629 4.2E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 Gene3D G3DSA:3.40.50.300 372 419 5.4E-129 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 Gene3D G3DSA:3.40.50.300 3 228 5.4E-129 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 SUPERFAMILY SSF52540 420 628 1.78E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 Gene3D G3DSA:1.10.3060.10 658 841 5.5E-57 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 Pfam PF07516 SecA Wing and Scaffold domain 627 840 7.3E-65 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 PRINTS PR00906 SecA protein signature 416 429 1.3E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 PRINTS PR00906 SecA protein signature 63 87 1.3E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 PRINTS PR00906 SecA protein signature 342 364 1.3E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 PRINTS PR00906 SecA protein signature 379 396 1.3E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 PRINTS PR00906 SecA protein signature 170 190 1.3E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 PRINTS PR00906 SecA protein signature 101 115 1.3E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 PRINTS PR00906 SecA protein signature 117 127 1.3E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 SUPERFAMILY SSF52540 371 418 4.21E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 SMART SM00957 6 405 0.0 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 Pfam PF01043 SecA preprotein cross-linking domain 233 361 1.9E-37 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RBRH_RS01335 f7ac6cd4cd74e6aa9f97664a38683757 944 SUPERFAMILY SSF52540 5 228 4.21E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 6.2E-50 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 SUPERFAMILY SSF52540 2 205 6.91E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 5.6E-52 T 23-04-2016 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 8.7E-302 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 Gene3D G3DSA:2.40.30.10 193 290 3.9E-25 T 23-04-2016 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.254 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 3.6E-17 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 Pfam PF00679 Elongation factor G C-terminus 399 483 3.7E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 SUPERFAMILY SSF50447 165 288 1.92E-29 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 Gene3D G3DSA:3.30.70.240 401 489 6.3E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 Gene3D G3DSA:3.40.50.300 2 192 1.2E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 SUPERFAMILY SSF54980 292 370 3.02E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 SUPERFAMILY SSF54980 399 493 4.22E-26 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 PANTHER PTHR23115:SF175 397 595 1.9E-287 T 23-04-2016 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 PANTHER PTHR23115:SF175 2 373 1.9E-287 T 23-04-2016 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 SMART SM00838 398 486 0.0051 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 Gene3D G3DSA:3.30.70.870 291 369 4.5E-26 T 23-04-2016 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 PANTHER PTHR23115 397 595 1.9E-287 T 23-04-2016 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 PANTHER PTHR23115 2 373 1.9E-287 T 23-04-2016 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.2E-9 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RBRH_RS03365 96ebfafe921122213e49b210ecf6d892 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RBRH_RS04765 a75bcf849124ad035f15d203217a3121 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 43.262 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RBRH_RS04765 a75bcf849124ad035f15d203217a3121 195 PANTHER PTHR23133 1 195 8.8E-105 T 23-04-2016 RBRH_RS04765 a75bcf849124ad035f15d203217a3121 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RBRH_RS04765 a75bcf849124ad035f15d203217a3121 195 SUPERFAMILY SSF54211 87 179 2.12E-34 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS04765 a75bcf849124ad035f15d203217a3121 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 5.1E-64 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RBRH_RS04765 a75bcf849124ad035f15d203217a3121 195 SUPERFAMILY SSF54211 1 86 1.77E-34 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS04765 a75bcf849124ad035f15d203217a3121 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RBRH_RS04765 a75bcf849124ad035f15d203217a3121 195 Gene3D G3DSA:3.30.230.40 90 195 5.9E-30 T 23-04-2016 RBRH_RS04765 a75bcf849124ad035f15d203217a3121 195 PANTHER PTHR23133:SF2 1 195 8.8E-105 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RBRH_RS04765 a75bcf849124ad035f15d203217a3121 195 Gene3D G3DSA:3.30.230.40 1 89 8.9E-39 T 23-04-2016 RBRH_RS02525 6d8462dda8f13a161f39505c0eff3fce 130 PANTHER PTHR21012 2 129 2.9E-63 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RBRH_RS02525 6d8462dda8f13a161f39505c0eff3fce 130 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 1.3E-49 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RBRH_RS02525 6d8462dda8f13a161f39505c0eff3fce 130 PIRSF PIRSF006246 1 129 1.3E-50 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RBRH_RS02525 6d8462dda8f13a161f39505c0eff3fce 130 PANTHER PTHR21012:SF0 2 129 2.9E-63 T 23-04-2016 RBRH_RS02525 6d8462dda8f13a161f39505c0eff3fce 130 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-53 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RBRH_RS02525 6d8462dda8f13a161f39505c0eff3fce 130 SUPERFAMILY SSF50692 1 122 2.32E-48 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RBRH_RS02525 6d8462dda8f13a161f39505c0eff3fce 130 Pfam PF02261 Aspartate decarboxylase 1 115 6.1E-50 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RBRH_RS02525 6d8462dda8f13a161f39505c0eff3fce 130 Gene3D G3DSA:2.40.40.20 1 126 2.0E-55 T 23-04-2016 RBRH_RS02525 6d8462dda8f13a161f39505c0eff3fce 130 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 128 72.109 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 12 173 4.0E-50 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Pfam PF01612 3'-5' exonuclease 327 512 3.9E-31 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Gene3D G3DSA:3.30.420.10 325 538 1.9E-77 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 696 719 5.1E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 787 798 5.1E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 809 820 5.1E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 871 884 5.1E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 841 857 5.1E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 750 775 5.1E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 726 739 5.1E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 674 689 5.1E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PRINTS PR00868 DNA-polymerase family A (pol I) signature 651 673 5.1E-75 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 SMART SM00482 682 888 2.8E-112 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Pfam PF00476 DNA polymerase family A 547 922 4.7E-152 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PANTHER PTHR10133 313 923 0.0 T 23-04-2016 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PANTHER PTHR10133 3 288 0.0 T 23-04-2016 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 SMART SM00475 9 264 2.4E-106 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 261 4.3E-22 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 SUPERFAMILY SSF56672 519 924 3.89E-156 T 23-04-2016 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 SUPERFAMILY SSF88723 10 173 2.58E-53 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PANTHER PTHR10133:SF27 313 923 0.0 T 23-04-2016 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 PANTHER PTHR10133:SF27 3 288 0.0 T 23-04-2016 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Gene3D G3DSA:1.10.150.20 708 813 2.6E-34 T 23-04-2016 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 SMART SM00279 176 211 2.3E-10 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Gene3D G3DSA:1.10.150.20 188 248 9.4E-22 T 23-04-2016 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Gene3D G3DSA:3.30.70.370 814 924 1.4E-63 T 23-04-2016 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Gene3D G3DSA:3.30.70.370 659 707 1.4E-63 T 23-04-2016 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 ProSitePatterns PS00447 DNA polymerase family A signature. 750 769 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 SUPERFAMILY SSF53098 330 513 1.48E-52 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 SUPERFAMILY SSF47807 174 292 1.26E-27 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Gene3D G3DSA:3.40.50.1010 10 187 3.9E-66 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 TIGRFAM TIGR00593 pola: DNA polymerase I 12 924 5.3E-265 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 Gene3D G3DSA:1.20.1060.10 539 658 5.3E-36 T 23-04-2016 RBRH_RS04125 c91287a1cf3a85641d4fa101709ea4d6 924 SMART SM00474 327 513 8.7E-29 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 Pfam PF02803 Thiolase, C-terminal domain 276 398 7.9E-45 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 PANTHER PTHR18919 3 399 1.8E-175 T 23-04-2016 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 397 5.3E-140 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 PANTHER PTHR18919:SF69 3 399 1.8E-175 T 23-04-2016 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 Gene3D G3DSA:3.40.47.10 7 130 1.6E-63 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 Gene3D G3DSA:3.40.47.10 191 282 1.6E-63 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 SUPERFAMILY SSF53901 5 273 7.77E-75 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 Gene3D G3DSA:3.40.47.10 150 190 3.5E-66 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 Gene3D G3DSA:3.40.47.10 283 398 3.5E-66 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 PIRSF PIRSF000429 2 399 3.5E-127 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 Pfam PF00108 Thiolase, N-terminal domain 9 268 9.2E-73 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RBRH_RS10790 bc7f719bed8ee0ec596fc40bffd296b2 399 SUPERFAMILY SSF53901 277 398 1.94E-42 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 Gene3D G3DSA:2.140.10.10 9 379 1.9E-65 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 Pfam PF13570 PQQ-like domain 347 379 6.2E-4 T 23-04-2016 IPR025666 Pyrrolo-quinoline quinone-like domain RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 9 377 3.4E-126 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 Pfam PF13360 PQQ-like domain 76 307 1.9E-51 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 PANTHER PTHR32303:SF8 14 370 2.4E-55 T 23-04-2016 RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 5 379 36.875 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 SMART SM00564 63 94 0.038 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 SMART SM00564 141 173 0.026 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 SMART SM00564 187 219 120.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 SMART SM00564 102 133 80.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 SMART SM00564 239 270 540.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 SMART SM00564 318 349 0.19 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 PANTHER PTHR32303 14 370 2.4E-55 T 23-04-2016 RBRH_RS05810 e9a43f1997a1ace91ee966e815a60cc1 380 SUPERFAMILY SSF50998 28 377 2.35E-68 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RBRH_RS09975 94e310dd5d93c12bb8c21e76aaa92a50 429 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 425 32.338 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS09975 94e310dd5d93c12bb8c21e76aaa92a50 429 Pfam PF01979 Amidohydrolase family 53 420 5.2E-13 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RBRH_RS09975 94e310dd5d93c12bb8c21e76aaa92a50 429 PANTHER PTHR11647:SF70 1 425 2.2E-130 T 23-04-2016 RBRH_RS09975 94e310dd5d93c12bb8c21e76aaa92a50 429 PANTHER PTHR11647 1 425 2.2E-130 T 23-04-2016 RBRH_RS09975 94e310dd5d93c12bb8c21e76aaa92a50 429 Gene3D G3DSA:3.20.20.140 69 388 1.5E-86 T 23-04-2016 RBRH_RS09975 94e310dd5d93c12bb8c21e76aaa92a50 429 SUPERFAMILY SSF51338 1 55 1.8E-29 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS09975 94e310dd5d93c12bb8c21e76aaa92a50 429 SUPERFAMILY SSF51338 367 425 1.8E-29 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS09975 94e310dd5d93c12bb8c21e76aaa92a50 429 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 17 423 3.2E-95 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS09975 94e310dd5d93c12bb8c21e76aaa92a50 429 Gene3D G3DSA:2.30.40.10 2 68 1.2E-16 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS09975 94e310dd5d93c12bb8c21e76aaa92a50 429 SUPERFAMILY SSF51556 56 367 5.45E-87 T 23-04-2016 IPR032466 Metal-dependent hydrolase RBRH_RS12230 16e9ff189aff1571f63f65642664c00c 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 6.0E-25 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS12230 16e9ff189aff1571f63f65642664c00c 44 PANTHER PTHR14503 1 44 3.6E-20 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS12230 16e9ff189aff1571f63f65642664c00c 44 Pfam PF00468 Ribosomal protein L34 1 44 1.3E-23 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS12230 16e9ff189aff1571f63f65642664c00c 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.049 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS12230 16e9ff189aff1571f63f65642664c00c 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS12230 16e9ff189aff1571f63f65642664c00c 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 5.0E-16 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.4E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.4E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 Pfam PF01926 50S ribosome-binding GTPase 5 120 3.1E-28 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 Pfam PF01926 50S ribosome-binding GTPase 180 298 4.6E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 354 434 2.3E-24 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 PANTHER PTHR11649:SF5 1 437 2.3E-139 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 331 4.0E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 154 1.7E-19 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 PIRSF PIRSF006485 1 442 6.2E-168 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 SUPERFAMILY SSF52540 4 164 1.52E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 SMART SM00382 177 320 0.059 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 SMART SM00382 1 142 4.4 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 Hamap MF_00195 GTPase Der [der]. 2 437 37.648 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 Gene3D G3DSA:3.40.50.300 178 359 2.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 Gene3D G3DSA:3.40.50.300 3 166 4.8E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 SUPERFAMILY SSF52540 138 441 4.72E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 Gene3D G3DSA:3.30.300.20 360 436 9.8E-24 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 PANTHER PTHR11649 1 437 2.3E-139 T 23-04-2016 RBRH_RS05815 11dbaed1dbbd6ac805355669e121db16 444 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 1.9E-168 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 SUPERFAMILY SSF50447 207 303 1.2E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.4E-229 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 PANTHER PTHR23115 1 395 1.3E-260 T 23-04-2016 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 SUPERFAMILY SSF52540 5 221 2.03E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.5E-59 T 23-04-2016 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 7.4E-16 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 Gene3D G3DSA:2.40.30.10 211 300 3.4E-36 T 23-04-2016 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 PANTHER PTHR23115:SF151 1 395 1.3E-260 T 23-04-2016 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.677 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 4.0E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.6E-34 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 Gene3D G3DSA:2.40.30.10 302 395 1.8E-47 T 23-04-2016 RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 Gene3D G3DSA:3.40.50.300 5 210 7.9E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04385 7ce63a0340381feea7e293369ee2c06e 396 SUPERFAMILY SSF50465 300 395 5.52E-37 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 SUPERFAMILY SSF50447 207 303 1.2E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.4E-229 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 PANTHER PTHR23115 1 395 1.3E-260 T 23-04-2016 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 SUPERFAMILY SSF52540 5 221 2.03E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.5E-59 T 23-04-2016 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 7.4E-16 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 Gene3D G3DSA:2.40.30.10 211 300 3.4E-36 T 23-04-2016 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 PANTHER PTHR23115:SF151 1 395 1.3E-260 T 23-04-2016 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.677 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 4.0E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.6E-34 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 Gene3D G3DSA:2.40.30.10 302 395 1.8E-47 T 23-04-2016 RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 Gene3D G3DSA:3.40.50.300 5 210 7.9E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04305 7ce63a0340381feea7e293369ee2c06e 396 SUPERFAMILY SSF50465 300 395 5.52E-37 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 406 1.8E-66 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Gene3D G3DSA:3.90.740.10 226 461 9.3E-59 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 SUPERFAMILY SSF52374 420 672 3.25E-141 T 23-04-2016 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 SUPERFAMILY SSF52374 7 225 3.25E-141 T 23-04-2016 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Gene3D G3DSA:3.40.50.620 7 225 9.6E-128 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Gene3D G3DSA:3.40.50.620 623 650 9.6E-128 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Gene3D G3DSA:3.40.50.620 494 578 9.6E-128 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PANTHER PTHR11946:SF7 241 578 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PANTHER PTHR11946:SF7 623 864 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PANTHER PTHR11946:SF7 1 206 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 864 22.402 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 8 864 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PANTHER PTHR11946 241 578 0.0 T 23-04-2016 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PANTHER PTHR11946 623 864 0.0 T 23-04-2016 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PANTHER PTHR11946 1 206 0.0 T 23-04-2016 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Gene3D G3DSA:1.10.730.10 651 800 1.0E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 SUPERFAMILY SSF47323 667 864 2.62E-31 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Pfam PF08264 Anticodon-binding domain of tRNA 705 828 1.1E-17 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 SUPERFAMILY SSF50677 225 419 6.28E-47 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 421 576 2.3E-8 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 623 663 1.4E-5 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 Pfam PF09334 tRNA synthetases class I (M) 38 171 2.7E-19 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 528 550 4.6E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.6E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.6E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 561 571 4.6E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.6E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 4.6E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS01630 8c7487e4ed91358b91ea97953b14b609 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 491 509 4.6E-47 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RBRH_RS16235 9ed176127fa5624abddac4cb47aec497 412 PANTHER PTHR35861 134 401 2.4E-42 T 23-04-2016 RBRH_RS16235 9ed176127fa5624abddac4cb47aec497 412 Pfam PF04984 Phage tail sheath protein 165 397 1.5E-21 T 23-04-2016 IPR007067 Tail sheath protein RBRH_RS16235 9ed176127fa5624abddac4cb47aec497 412 PANTHER PTHR35861:SF1 134 401 2.4E-42 T 23-04-2016 RBRH_RS05785 db96e0d50a2698d3449cc297cc03621a 379 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 7.5E-136 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS05785 db96e0d50a2698d3449cc297cc03621a 379 PIRSF PIRSF006004 3 368 1.3E-147 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS05785 db96e0d50a2698d3449cc297cc03621a 379 PANTHER PTHR30544:SF5 8 366 5.9E-172 T 23-04-2016 RBRH_RS05785 db96e0d50a2698d3449cc297cc03621a 379 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 6 355 74.178 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS05785 db96e0d50a2698d3449cc297cc03621a 379 SUPERFAMILY SSF102114 106 317 6.8E-13 T 23-04-2016 RBRH_RS05785 db96e0d50a2698d3449cc297cc03621a 379 PANTHER PTHR30544 8 366 5.9E-172 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS05785 db96e0d50a2698d3449cc297cc03621a 379 Gene3D G3DSA:3.20.20.70 106 324 1.4E-10 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS05785 db96e0d50a2698d3449cc297cc03621a 379 Pfam PF04055 Radical SAM superfamily 110 286 1.6E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS08600 2d1debd25ebc095d73986be190b3108e 117 PANTHER PTHR40275 2 98 7.6E-25 T 23-04-2016 RBRH_RS08600 2d1debd25ebc095d73986be190b3108e 117 Gene3D G3DSA:1.10.260.40 44 92 1.8E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS08600 2d1debd25ebc095d73986be190b3108e 117 PANTHER PTHR40275:SF1 2 98 7.6E-25 T 23-04-2016 RBRH_RS08600 2d1debd25ebc095d73986be190b3108e 117 SUPERFAMILY SSF47413 30 94 1.05E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS08600 2d1debd25ebc095d73986be190b3108e 117 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 5 92 8.1E-40 T 23-04-2016 IPR014057 Addiction module antidote protein, HI1420 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PANTHER PTHR10169:SF45 1 662 0.0 T 23-04-2016 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 SMART SM00387 33 183 3.3E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 SUPERFAMILY SSF54211 262 406 1.06E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 SUPERFAMILY SSF56719 408 654 4.18E-76 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 SMART SM00433 38 656 2.3E-191 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 Gene3D G3DSA:3.30.230.10 264 406 6.9E-37 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 SUPERFAMILY SSF55874 10 225 4.32E-56 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 9 656 2.2E-218 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 181 2.4E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 Pfam PF01751 Toprim domain 432 546 4.8E-14 T 23-04-2016 IPR006171 Toprim domain RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR01098 Topoisomerase IV subunit B signature 184 201 5.4E-34 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR01098 Topoisomerase IV subunit B signature 357 380 5.4E-34 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR01098 Topoisomerase IV subunit B signature 143 157 5.4E-34 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR01098 Topoisomerase IV subunit B signature 313 329 5.4E-34 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR01098 Topoisomerase IV subunit B signature 492 504 5.4E-34 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR01098 Topoisomerase IV subunit B signature 526 542 5.4E-34 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR01098 Topoisomerase IV subunit B signature 330 345 5.4E-34 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR01098 Topoisomerase IV subunit B signature 31 44 5.4E-34 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR01098 Topoisomerase IV subunit B signature 381 406 5.4E-34 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 Gene3D G3DSA:3.30.565.10 20 225 2.1E-68 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR00418 DNA topoisomerase II family signature 117 131 9.2E-61 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR00418 DNA topoisomerase II family signature 71 84 9.2E-61 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR00418 DNA topoisomerase II family signature 36 51 9.2E-61 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR00418 DNA topoisomerase II family signature 502 518 9.2E-61 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR00418 DNA topoisomerase II family signature 592 608 9.2E-61 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR00418 DNA topoisomerase II family signature 285 298 9.2E-61 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR00418 DNA topoisomerase II family signature 520 537 9.2E-61 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR00418 DNA topoisomerase II family signature 540 552 9.2E-61 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PRINTS PR00418 DNA topoisomerase II family signature 433 447 9.2E-61 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 588 652 7.7E-23 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 PANTHER PTHR10169 1 662 0.0 T 23-04-2016 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 Pfam PF00204 DNA gyrase B 266 404 2.2E-32 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 Gene3D G3DSA:3.40.50.670 417 641 3.9E-78 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09540 79362e35852f42f9a69db56a6d5f23cc 662 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 7 660 44.582 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS08310 666437a58a48240cafc7113fbc9a6dbe 160 PANTHER PTHR11717 2 155 2.9E-58 T 23-04-2016 RBRH_RS08310 666437a58a48240cafc7113fbc9a6dbe 160 Gene3D G3DSA:3.40.50.270 2 154 1.7E-54 T 23-04-2016 RBRH_RS08310 666437a58a48240cafc7113fbc9a6dbe 160 SUPERFAMILY SSF52788 2 154 7.46E-51 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RBRH_RS08310 666437a58a48240cafc7113fbc9a6dbe 160 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 151 3.7E-41 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RBRH_RS08310 666437a58a48240cafc7113fbc9a6dbe 160 PANTHER PTHR11717:SF7 2 155 2.9E-58 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RBRH_RS08310 666437a58a48240cafc7113fbc9a6dbe 160 SMART SM00226 4 153 1.3E-46 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RBRH_RS08310 666437a58a48240cafc7113fbc9a6dbe 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 2.3E-21 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RBRH_RS08310 666437a58a48240cafc7113fbc9a6dbe 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 2.3E-21 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RBRH_RS08310 666437a58a48240cafc7113fbc9a6dbe 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 2.3E-21 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RBRH_RS08310 666437a58a48240cafc7113fbc9a6dbe 160 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 2.3E-21 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RBRH_RS00365 47a4c07d22758a39f2eb376d52ba6694 136 TIGRFAM TIGR01707 gspI: type II secretion system protein I 17 115 3.2E-18 T 23-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 RBRH_RS00365 47a4c07d22758a39f2eb376d52ba6694 136 Pfam PF02501 Type II secretion system (T2SS), protein I 51 128 2.5E-23 T 23-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 RBRH_RS00365 47a4c07d22758a39f2eb376d52ba6694 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 36 3.4E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS00365 47a4c07d22758a39f2eb376d52ba6694 136 PANTHER PTHR38779 11 133 3.6E-20 T 23-04-2016 RBRH_RS00365 47a4c07d22758a39f2eb376d52ba6694 136 Pfam PF13633 Prokaryotic N-terminal methylation site 16 41 1.7E-10 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS00365 47a4c07d22758a39f2eb376d52ba6694 136 SUPERFAMILY SSF54523 50 128 2.25E-18 T 23-04-2016 RBRH_RS00365 47a4c07d22758a39f2eb376d52ba6694 136 Gene3D G3DSA:3.30.1300.30 47 123 1.1E-11 T 23-04-2016 RBRH_RS15845 a3e61f1919fbbf08e09c435a53b79b08 84 PANTHER PTHR24423:SF474 2 84 7.7E-16 T 23-04-2016 RBRH_RS15845 a3e61f1919fbbf08e09c435a53b79b08 84 Pfam PF00512 His Kinase A (phospho-acceptor) domain 54 77 1.1E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS15845 a3e61f1919fbbf08e09c435a53b79b08 84 PANTHER PTHR24423 2 84 7.7E-16 T 23-04-2016 RBRH_RS15845 a3e61f1919fbbf08e09c435a53b79b08 84 Gene3D G3DSA:1.10.287.130 45 77 1.0E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS15845 a3e61f1919fbbf08e09c435a53b79b08 84 SUPERFAMILY SSF47384 36 79 4.32E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS08620 6a64b9ee4412a61d0c04e63d891a8f1c 283 Gene3D G3DSA:3.40.50.1820 50 278 1.0E-54 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08620 6a64b9ee4412a61d0c04e63d891a8f1c 283 SUPERFAMILY SSF53474 51 278 3.91E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08620 6a64b9ee4412a61d0c04e63d891a8f1c 283 Pfam PF01738 Dienelactone hydrolase family 56 278 2.9E-55 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RBRH_RS08620 6a64b9ee4412a61d0c04e63d891a8f1c 283 PANTHER PTHR17630:SF42 53 278 1.6E-73 T 23-04-2016 RBRH_RS08620 6a64b9ee4412a61d0c04e63d891a8f1c 283 PANTHER PTHR17630 53 278 1.6E-73 T 23-04-2016 RBRH_RS03900 c0f351da866bff5f7d11fe493b9d9142 88 PIRSF PIRSF003108 1 88 3.2E-30 T 23-04-2016 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 RBRH_RS03900 c0f351da866bff5f7d11fe493b9d9142 88 PANTHER PTHR38781:SF1 3 84 2.3E-15 T 23-04-2016 RBRH_RS03900 c0f351da866bff5f7d11fe493b9d9142 88 Pfam PF04221 RelB antitoxin 7 75 5.4E-22 T 23-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ RBRH_RS03900 c0f351da866bff5f7d11fe493b9d9142 88 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 2.0E-21 T 23-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ RBRH_RS03900 c0f351da866bff5f7d11fe493b9d9142 88 PANTHER PTHR38781 3 84 2.3E-15 T 23-04-2016 RBRH_RS02510 6b805d6b533bab3f8db5699661ddedb7 317 Gene3D G3DSA:3.40.50.1980 160 299 7.6E-33 T 23-04-2016 RBRH_RS02510 6b805d6b533bab3f8db5699661ddedb7 317 Pfam PF01497 Periplasmic binding protein 42 275 8.9E-23 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RBRH_RS02510 6b805d6b533bab3f8db5699661ddedb7 317 SUPERFAMILY SSF53807 18 298 2.9E-63 T 23-04-2016 RBRH_RS02510 6b805d6b533bab3f8db5699661ddedb7 317 PANTHER PTHR30535 20 299 1.9E-53 T 23-04-2016 RBRH_RS02510 6b805d6b533bab3f8db5699661ddedb7 317 Gene3D G3DSA:3.40.50.1980 39 157 1.7E-31 T 23-04-2016 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 TIGRFAM TIGR03550 F420_cofG: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit 62 384 1.2E-134 T 23-04-2016 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 Pfam PF04055 Radical SAM superfamily 70 246 3.0E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 Pfam PF04055 Radical SAM superfamily 486 658 2.5E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 477 790 3.6E-113 T 23-04-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 PANTHER PTHR22976 432 815 5.1E-153 T 23-04-2016 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 SUPERFAMILY SSF102114 44 344 3.92E-40 T 23-04-2016 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 TIGRFAM TIGR03551 F420_cofH: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 443 791 1.0E-151 T 23-04-2016 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 SMART SM00729 65 295 1.4E-6 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 SMART SM00729 481 709 0.0064 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 Gene3D G3DSA:3.20.20.70 440 783 2.0E-81 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 Gene3D G3DSA:3.20.20.70 40 348 4.7E-67 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 PANTHER PTHR22976:SF4 432 815 5.1E-153 T 23-04-2016 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 SUPERFAMILY SSF102114 440 781 1.31E-51 T 23-04-2016 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 Hamap MF_01612 FO synthase subunit 2 [cofH]. 429 792 47.699 T 23-04-2016 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 RBRH_RS08965 3fc657b52a9c4714d40dffd4a0cccd6d 830 Hamap MF_01611 FO synthase subunit 1 [cofG]. 61 387 46.976 T 23-04-2016 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SUPERFAMILY SSF47336 1287 1358 1.13E-20 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Pfam PF13193 AMP-binding enzyme C-terminal domain 1194 1267 9.0E-10 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Pfam PF13193 AMP-binding enzyme C-terminal domain 137 210 3.2E-10 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1318 1333 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SUPERFAMILY SSF56801 744 1307 7.72E-167 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:3.40.50.980 1855 2009 1.6E-54 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 PANTHER PTHR24095:SF43 5 1363 0.0 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 PANTHER PTHR24095:SF43 1387 2317 0.0 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:3.40.50.980 2010 2166 1.3E-47 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:3.40.50.980 939 1096 2.1E-35 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SUPERFAMILY SSF52777 1406 1601 8.12E-30 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Pfam PF00550 Phosphopantetheine attachment site 1296 1356 1.7E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Pfam PF00550 Phosphopantetheine attachment site 239 301 4.3E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:3.30.300.30 2259 2331 3.1E-17 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SUPERFAMILY SSF47336 229 301 1.31E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:1.10.1200.10 1297 1362 7.4E-30 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:1.10.1200.10 240 306 2.1E-28 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Pfam PF00501 AMP-binding enzyme 1861 2265 4.5E-104 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Pfam PF00501 AMP-binding enzyme 7 129 5.5E-35 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Pfam PF00501 AMP-binding enzyme 787 1186 2.3E-105 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 ProSitePatterns PS00455 Putative AMP-binding domain signature. 929 940 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2003 2014 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SUPERFAMILY SSF52777 508 774 4.56E-67 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:3.40.50.980 781 938 2.9E-54 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SUPERFAMILY SSF56801 1820 2333 2.75E-148 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 PANTHER PTHR24095 5 1363 0.0 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 PANTHER PTHR24095 1387 2317 0.0 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SMART SM00823 Phosphopantetheine attachment site 237 305 0.0017 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SMART SM00823 Phosphopantetheine attachment site 1294 1362 4.8E-5 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:3.30.300.30 124 239 3.3E-43 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:3.30.300.30 1181 1296 7.6E-43 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SUPERFAMILY SSF52777 326 502 4.89E-48 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SUPERFAMILY SSF56801 7 250 8.63E-80 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:3.40.50.980 5 39 1.2E-5 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Pfam PF00668 Condensation domain 321 621 1.1E-73 T 23-04-2016 IPR001242 Condensation domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Pfam PF00668 Condensation domain 1408 1700 1.1E-40 T 23-04-2016 IPR001242 Condensation domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:2.30.38.10 40 119 6.6E-31 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:2.30.38.10 2175 2255 1.9E-27 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Gene3D G3DSA:2.30.38.10 1097 1176 3.6E-32 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 SUPERFAMILY SSF52777 1588 1848 1.89E-46 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 Pfam PF13745 HxxPF-repeated domain 643 732 7.5E-31 T 23-04-2016 RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1882 2289 2.7E-140 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS16260 ca93d4d460aaabc70e7bb8e214830a73 2340 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 808 1210 1.6E-141 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS06955 927257df2e2fa5ee6f4fffbeb379f969 466 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 456 8.8E-179 T 23-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 RBRH_RS06955 927257df2e2fa5ee6f4fffbeb379f969 466 SUPERFAMILY SSF53756 2 458 1.88E-145 T 23-04-2016 RBRH_RS06955 927257df2e2fa5ee6f4fffbeb379f969 466 Pfam PF00982 Glycosyltransferase family 20 13 455 2.4E-133 T 23-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 RBRH_RS06955 927257df2e2fa5ee6f4fffbeb379f969 466 Gene3D G3DSA:3.40.50.2000 1 241 1.6E-69 T 23-04-2016 RBRH_RS06955 927257df2e2fa5ee6f4fffbeb379f969 466 PANTHER PTHR10788 1 456 2.4E-178 T 23-04-2016 RBRH_RS06955 927257df2e2fa5ee6f4fffbeb379f969 466 Gene3D G3DSA:3.40.50.2000 242 439 1.7E-78 T 23-04-2016 RBRH_RS06955 927257df2e2fa5ee6f4fffbeb379f969 466 PANTHER PTHR10788:SF6 1 456 2.4E-178 T 23-04-2016 RBRH_RS08770 a171d0f481575fec6fd7bdc111fe7b9f 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RBRH_RS08770 a171d0f481575fec6fd7bdc111fe7b9f 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 380 3.5E-47 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RBRH_RS08770 a171d0f481575fec6fd7bdc111fe7b9f 397 PIRSF PIRSF001413 2 396 1.6E-162 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RBRH_RS08770 a171d0f481575fec6fd7bdc111fe7b9f 397 PANTHER PTHR10314:SF3 9 392 1.1E-231 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RBRH_RS08770 a171d0f481575fec6fd7bdc111fe7b9f 397 SUPERFAMILY SSF53686 5 391 5.5E-148 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RBRH_RS08770 a171d0f481575fec6fd7bdc111fe7b9f 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 392 9.7E-193 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RBRH_RS08770 a171d0f481575fec6fd7bdc111fe7b9f 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 52.793 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RBRH_RS08770 a171d0f481575fec6fd7bdc111fe7b9f 397 Gene3D G3DSA:3.40.50.1100 180 392 2.2E-96 T 23-04-2016 RBRH_RS08770 a171d0f481575fec6fd7bdc111fe7b9f 397 PANTHER PTHR10314 9 392 1.1E-231 T 23-04-2016 RBRH_RS08770 a171d0f481575fec6fd7bdc111fe7b9f 397 Gene3D G3DSA:3.40.50.1100 100 179 4.9E-22 T 23-04-2016 RBRH_RS07190 a5980134a5a976e1b1af34970e9f5bad 241 Gene3D G3DSA:3.40.50.2300 4 128 1.3E-40 T 23-04-2016 RBRH_RS07190 a5980134a5a976e1b1af34970e9f5bad 241 Gene3D G3DSA:1.10.10.10 136 237 1.5E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS07190 a5980134a5a976e1b1af34970e9f5bad 241 PANTHER PTHR26402:SF292 7 240 1.7E-109 T 23-04-2016 RBRH_RS07190 a5980134a5a976e1b1af34970e9f5bad 241 Pfam PF00072 Response regulator receiver domain 9 118 1.2E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS07190 a5980134a5a976e1b1af34970e9f5bad 241 SUPERFAMILY SSF46894 136 237 9.92E-29 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RBRH_RS07190 a5980134a5a976e1b1af34970e9f5bad 241 SUPERFAMILY SSF52172 5 126 1.11E-41 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS07190 a5980134a5a976e1b1af34970e9f5bad 241 PANTHER PTHR26402 7 240 1.7E-109 T 23-04-2016 RBRH_RS07190 a5980134a5a976e1b1af34970e9f5bad 241 SMART SM00448 7 118 2.3E-44 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS07190 a5980134a5a976e1b1af34970e9f5bad 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 235 3.8E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS07190 a5980134a5a976e1b1af34970e9f5bad 241 SMART SM00862 159 235 3.3E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS08645 e7e81622f91e95658e07c88955ea9770 564 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 7 537 1.6E-94 T 23-04-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 RBRH_RS08645 e7e81622f91e95658e07c88955ea9770 564 PANTHER PTHR24220 328 558 2.2E-75 T 23-04-2016 RBRH_RS08645 e7e81622f91e95658e07c88955ea9770 564 SUPERFAMILY SSF52540 325 544 6.87E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08645 e7e81622f91e95658e07c88955ea9770 564 SMART SM00382 354 531 7.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS08645 e7e81622f91e95658e07c88955ea9770 564 Gene3D G3DSA:1.20.1560.10 5 298 3.6E-11 T 23-04-2016 RBRH_RS08645 e7e81622f91e95658e07c88955ea9770 564 PANTHER PTHR24220:SF425 328 558 2.2E-75 T 23-04-2016 RBRH_RS08645 e7e81622f91e95658e07c88955ea9770 564 Pfam PF00005 ABC transporter 348 482 4.5E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS08645 e7e81622f91e95658e07c88955ea9770 564 SUPERFAMILY SSF90123 5 288 2.22E-18 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS08645 e7e81622f91e95658e07c88955ea9770 564 Gene3D G3DSA:3.40.50.300 327 543 6.4E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 Pfam PF05746 DALR anticodon binding domain 479 602 7.5E-34 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 34 602 4.2E-116 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 9 102 2.3E-18 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 SUPERFAMILY SSF55190 22 122 8.24E-18 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 SUPERFAMILY SSF52374 130 489 6.44E-79 T 23-04-2016 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 SMART SM01016 7 102 1.1E-25 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 149 165 2.7E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 322 343 2.7E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 173 186 2.7E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 149 2.7E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 Gene3D G3DSA:3.30.1360.70 9 120 6.1E-25 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 PANTHER PTHR11956 5 602 7.1E-203 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 Pfam PF00750 tRNA synthetases class I (R) 128 415 4.9E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 Gene3D G3DSA:3.40.50.620 130 483 5.8E-105 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 144 153 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 PANTHER PTHR11956:SF6 5 602 7.1E-203 T 23-04-2016 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 SUPERFAMILY SSF47323 474 602 1.24E-32 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 Hamap MF_00123 Arginine--tRNA ligase [argS]. 11 602 24.411 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 SMART SM00836 479 602 6.6E-48 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RBRH_RS11465 488e399c33c8358d39f02b4cb0fca5ac 602 Gene3D G3DSA:1.10.730.10 484 602 5.6E-41 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 PANTHER PTHR11741 1 290 3.5E-121 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 Pfam PF00889 Elongation factor TS 71 270 3.0E-71 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 287 1.2E-95 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 Gene3D G3DSA:1.10.286.20 192 233 1.8E-19 T 23-04-2016 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 SUPERFAMILY SSF54713 56 145 5.23E-25 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 SUPERFAMILY SSF46934 3 56 5.1E-13 T 23-04-2016 IPR009060 UBA-like GO:0005515 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 Gene3D G3DSA:3.30.479.20 57 147 1.8E-19 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 Gene3D G3DSA:1.10.8.10 3 55 4.2E-20 T 23-04-2016 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 287 78.81 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 SUPERFAMILY SSF54713 150 287 1.96E-51 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 Gene3D G3DSA:3.30.479.20 234 269 9.3E-30 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RBRH_RS06445 80e1186074b92dd53d38ad8b12ae90c0 293 Gene3D G3DSA:3.30.479.20 150 185 9.3E-30 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RBRH_RS08475 21e7c7600c1b2d5013afb7d56ed51c67 302 Pfam PF01263 Aldose 1-epimerase 7 294 1.4E-13 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RBRH_RS08475 21e7c7600c1b2d5013afb7d56ed51c67 302 SUPERFAMILY SSF74650 3 299 3.45E-46 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RBRH_RS08475 21e7c7600c1b2d5013afb7d56ed51c67 302 PANTHER PTHR11122 220 302 2.1E-25 T 23-04-2016 RBRH_RS08475 21e7c7600c1b2d5013afb7d56ed51c67 302 PANTHER PTHR11122 2 70 2.1E-25 T 23-04-2016 RBRH_RS08475 21e7c7600c1b2d5013afb7d56ed51c67 302 PANTHER PTHR11122 86 203 2.1E-25 T 23-04-2016 RBRH_RS08475 21e7c7600c1b2d5013afb7d56ed51c67 302 PANTHER PTHR11122:SF14 220 302 2.1E-25 T 23-04-2016 RBRH_RS08475 21e7c7600c1b2d5013afb7d56ed51c67 302 PANTHER PTHR11122:SF14 2 70 2.1E-25 T 23-04-2016 RBRH_RS08475 21e7c7600c1b2d5013afb7d56ed51c67 302 PANTHER PTHR11122:SF14 86 203 2.1E-25 T 23-04-2016 RBRH_RS08475 21e7c7600c1b2d5013afb7d56ed51c67 302 Gene3D G3DSA:2.70.98.10 3 297 4.2E-32 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 Gene3D G3DSA:3.30.572.10 4 278 1.2E-114 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 5 85 3.7E-36 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 86 278 1.3E-74 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 Hamap MF_00008 Thymidylate synthase [thyA]. 2 278 42.621 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 SUPERFAMILY SSF55831 3 278 6.67E-113 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 Pfam PF00303 Thymidylate synthase 5 278 3.2E-106 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 PANTHER PTHR11548 5 278 4.2E-150 T 23-04-2016 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 PRINTS PR00108 Thymidylate synthase family signature 211 228 2.5E-36 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 PRINTS PR00108 Thymidylate synthase family signature 155 170 2.5E-36 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 PRINTS PR00108 Thymidylate synthase family signature 43 64 2.5E-36 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RBRH_RS03145 fd83134772d4f62e3fc1c64a625eceb6 278 PRINTS PR00108 Thymidylate synthase family signature 173 199 2.5E-36 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RBRH_RS05645 f9f1c6cda8e8f0de71028dc6163bce0a 78 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 40 8.3E-9 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RBRH_RS05645 f9f1c6cda8e8f0de71028dc6163bce0a 78 Gene3D G3DSA:3.40.1620.10 3 40 1.9E-8 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RBRH_RS05645 f9f1c6cda8e8f0de71028dc6163bce0a 78 SUPERFAMILY SSF143120 2 41 7.59E-8 T 23-04-2016 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Gene3D G3DSA:3.90.199.10 34 216 9.1E-86 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 513 2.4E-154 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 PANTHER PTHR10169:SF48 2 417 0.0 T 23-04-2016 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 PANTHER PTHR10169:SF48 457 817 0.0 T 23-04-2016 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 SUPERFAMILY SSF56719 30 528 1.05E-178 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 851 29.301 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Gene3D G3DSA:2.120.10.90 538 847 1.1E-133 T 23-04-2016 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 SUPERFAMILY SSF101904 540 857 6.8E-110 T 23-04-2016 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 848 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 545 592 8.9E-12 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 695 3.8E-7 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 595 644 2.4E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 751 797 4.0E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 802 844 2.2E-11 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 700 745 3.5E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 PANTHER PTHR10169 2 417 0.0 T 23-04-2016 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 PANTHER PTHR10169 457 817 0.0 T 23-04-2016 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Gene3D G3DSA:1.10.268.10 363 504 7.6E-47 T 23-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 SMART SM00434 11 506 4.7E-286 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS02935 4262118490e2ad74376919c142431a9f 867 Gene3D G3DSA:3.30.1360.40 236 333 8.7E-41 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 445 2.8E-204 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 445 43.03 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 PANTHER PTHR11262 220 445 2.3E-195 T 23-04-2016 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 PANTHER PTHR11262 1 105 2.3E-195 T 23-04-2016 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 Gene3D G3DSA:1.10.8.60 337 445 6.6E-31 T 23-04-2016 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 Pfam PF07724 AAA domain (Cdc48 subfamily) 186 331 2.6E-40 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 Gene3D G3DSA:1.10.8.10 111 179 1.9E-30 T 23-04-2016 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 Gene3D G3DSA:1.10.8.10 215 245 1.9E-30 T 23-04-2016 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 PANTHER PTHR11262:SF3 220 445 2.3E-195 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 PANTHER PTHR11262:SF3 1 105 2.3E-195 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 SUPERFAMILY SSF52540 4 442 1.74E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 SMART SM01086 337 431 1.3E-16 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 98 3.2E-6 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 SMART SM00382 49 334 4.4E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 Gene3D G3DSA:3.40.50.300 247 333 6.0E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11930 3d1a1f52657feb5b265504f6f7d5abfa 445 Gene3D G3DSA:3.40.50.300 3 110 6.0E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 1.0E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 SUPERFAMILY SSF55785 104 184 7.8E-6 T 23-04-2016 IPR000014 PAS domain RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 PANTHER PTHR24423:SF554 1 429 1.9E-113 T 23-04-2016 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 Gene3D G3DSA:3.30.565.10 258 425 3.0E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 Gene3D G3DSA:3.30.450.20 93 197 1.5E-10 T 23-04-2016 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 SUPERFAMILY SSF55874 261 426 1.44E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 4.36E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 4.36E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 4.36E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 4.36E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 PANTHER PTHR24423 1 429 1.9E-113 T 23-04-2016 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 Pfam PF11808 Domain of unknown function (DUF3329) 5 90 2.6E-17 T 23-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 Pfam PF13188 PAS domain 105 147 2.7E-4 T 23-04-2016 IPR000014 PAS domain RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 426 2.7E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 SMART SM00388 206 272 2.7E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 Gene3D G3DSA:1.10.287.130 198 257 1.0E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 2.7E-133 T 23-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 SUPERFAMILY SSF47384 193 270 8.24E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS03660 23b46ff6a6ec5bc789481cdd9fde5180 437 SMART SM00387 316 428 8.0E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS03465 dd315859e287e20cf498cba1db2c29cd 466 Gene3D G3DSA:3.40.50.2000 1 241 8.2E-68 T 23-04-2016 RBRH_RS03465 dd315859e287e20cf498cba1db2c29cd 466 Gene3D G3DSA:3.40.50.2000 242 443 9.6E-76 T 23-04-2016 RBRH_RS03465 dd315859e287e20cf498cba1db2c29cd 466 Pfam PF00982 Glycosyltransferase family 20 21 458 2.9E-131 T 23-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 RBRH_RS03465 dd315859e287e20cf498cba1db2c29cd 466 PANTHER PTHR10788:SF6 1 459 2.3E-176 T 23-04-2016 RBRH_RS03465 dd315859e287e20cf498cba1db2c29cd 466 SUPERFAMILY SSF53756 2 458 1.32E-143 T 23-04-2016 RBRH_RS03465 dd315859e287e20cf498cba1db2c29cd 466 PANTHER PTHR10788 1 459 2.3E-176 T 23-04-2016 RBRH_RS03465 dd315859e287e20cf498cba1db2c29cd 466 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 459 2.1E-176 T 23-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 SUPERFAMILY SSF52540 587 673 5.78E-180 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 SUPERFAMILY SSF52540 1 541 5.78E-180 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 PANTHER PTHR11070:SF7 1 504 5.1E-213 T 23-04-2016 RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 PANTHER PTHR11070:SF7 563 671 5.1E-213 T 23-04-2016 RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 268 1.5E-78 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 PANTHER PTHR11070 1 504 5.1E-213 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 PANTHER PTHR11070 563 671 5.1E-213 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 Gene3D G3DSA:3.40.50.300 586 677 7.5E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 Gene3D G3DSA:3.40.50.300 283 384 7.5E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 Gene3D G3DSA:1.10.10.160 112 184 2.0E-23 T 23-04-2016 IPR013986 DExx box DNA helicase domain RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 Pfam PF13361 UvrD-like helicase C-terminal domain 274 650 1.1E-69 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 Gene3D G3DSA:3.40.50.300 2 108 6.4E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 Gene3D G3DSA:3.40.50.300 185 282 6.4E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 Gene3D G3DSA:1.10.486.10 385 508 6.1E-44 T 23-04-2016 RBRH_RS03790 3e31e9a0387ce32630b8b87bb71f2a4e 791 Gene3D G3DSA:1.10.486.10 557 575 6.1E-44 T 23-04-2016 RBRH_RS04180 4b33f58d0139419775beb1dc4dd3be76 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 39 1.0E-6 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04180 4b33f58d0139419775beb1dc4dd3be76 70 PANTHER PTHR21109 1 60 1.9E-22 T 23-04-2016 RBRH_RS04180 4b33f58d0139419775beb1dc4dd3be76 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.9E-15 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04180 4b33f58d0139419775beb1dc4dd3be76 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.9E-15 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04180 4b33f58d0139419775beb1dc4dd3be76 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.9E-15 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04180 4b33f58d0139419775beb1dc4dd3be76 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.9E-15 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04180 4b33f58d0139419775beb1dc4dd3be76 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.267 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04180 4b33f58d0139419775beb1dc4dd3be76 70 Pfam PF01165 Ribosomal protein S21 3 57 8.4E-21 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04180 4b33f58d0139419775beb1dc4dd3be76 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 9.2E-24 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 256 310 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 174 192 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 102 126 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 203 222 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 75 98 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 359 377 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 28 53 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 387 406 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 254 275 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 145 157 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 300 315 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 345 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PRINTS PR01165 Cytochrome c oxidase subunit I signature 437 458 1.4E-121 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 SUPERFAMILY SSF81442 25 535 3.27E-193 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PANTHER PTHR10422 14 536 0.0 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 Gene3D G3DSA:1.20.210.10 16 535 1.4E-218 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 535 2.8E-212 T 23-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 PANTHER PTHR10422:SF27 14 536 0.0 T 23-04-2016 RBRH_RS11215 677a92df265f44e7ad8fcbd4a0f72805 536 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 37 478 6.0E-155 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RBRH_RS03005 b976fd84ddc07feff3ea754dc2c1b422 109 Gene3D G3DSA:1.10.150.280 26 90 1.3E-18 T 23-04-2016 RBRH_RS03005 b976fd84ddc07feff3ea754dc2c1b422 109 SUPERFAMILY SSF47781 25 87 3.78E-18 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RBRH_RS03005 b976fd84ddc07feff3ea754dc2c1b422 109 PANTHER PTHR21180 25 84 8.4E-13 T 23-04-2016 RBRH_RS03005 b976fd84ddc07feff3ea754dc2c1b422 109 Pfam PF12836 Helix-hairpin-helix motif 26 84 2.1E-15 T 23-04-2016 RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 PANTHER PTHR30537:SF26 1 309 2.7E-103 T 23-04-2016 RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 SUPERFAMILY SSF46785 5 88 2.28E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 Gene3D G3DSA:3.40.190.10 180 258 3.4E-16 T 23-04-2016 RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 SUPERFAMILY SSF53850 93 295 1.1E-39 T 23-04-2016 RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 Pfam PF03466 LysR substrate binding domain 92 292 1.5E-34 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 Gene3D G3DSA:3.40.190.10 96 179 9.6E-30 T 23-04-2016 RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 Gene3D G3DSA:1.10.10.10 4 88 3.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 PANTHER PTHR30537 1 309 2.7E-103 T 23-04-2016 RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 3.8E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 4.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS11360 6f81ecf588b5f666703848c0daff816b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.0E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 23 859 4.7E-260 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 35 661 4.5E-207 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 Pfam PF08264 Anticodon-binding domain of tRNA 705 859 2.6E-26 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 SUPERFAMILY SSF50677 209 416 2.88E-47 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 SUPERFAMILY SSF47323 672 935 3.92E-71 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PANTHER PTHR11946 240 265 0.0 T 23-04-2016 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PANTHER PTHR11946 16 220 0.0 T 23-04-2016 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PANTHER PTHR11946 288 931 0.0 T 23-04-2016 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PANTHER PTHR11946:SF11 240 265 0.0 T 23-04-2016 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PANTHER PTHR11946:SF11 16 220 0.0 T 23-04-2016 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PANTHER PTHR11946:SF11 288 931 0.0 T 23-04-2016 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 10 936 20.368 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 Gene3D G3DSA:1.10.730.10 661 843 3.2E-41 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 66 77 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 59 70 2.3E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 545 558 2.3E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 244 267 2.3E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 581 590 2.3E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 414 429 2.3E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 Pfam PF06827 Zinc finger found in FPG and IleRS 907 931 3.1E-8 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 SUPERFAMILY SSF52374 416 669 8.19E-128 T 23-04-2016 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 SUPERFAMILY SSF52374 16 207 8.19E-128 T 23-04-2016 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 Gene3D G3DSA:3.90.740.10 212 402 9.6E-46 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 Gene3D G3DSA:3.40.50.620 22 205 1.5E-130 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02260 a34768e49c78352ffde7d23814f305b9 945 Gene3D G3DSA:3.40.50.620 419 656 1.5E-130 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02965 f05c55215a05be54c4f56ae9ed2a6cff 243 Pfam PF02224 Cytidylate kinase 14 223 4.9E-68 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RBRH_RS02965 f05c55215a05be54c4f56ae9ed2a6cff 243 TIGRFAM TIGR00017 cmk: cytidylate kinase 12 219 2.5E-67 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RBRH_RS02965 f05c55215a05be54c4f56ae9ed2a6cff 243 SUPERFAMILY SSF52540 12 225 1.7E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02965 f05c55215a05be54c4f56ae9ed2a6cff 243 Gene3D G3DSA:3.40.50.300 12 223 2.6E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02965 f05c55215a05be54c4f56ae9ed2a6cff 243 PANTHER PTHR21299 11 234 3.2E-60 T 23-04-2016 RBRH_RS02965 f05c55215a05be54c4f56ae9ed2a6cff 243 Hamap MF_00238 Cytidylate kinase [cmk]. 12 226 31.123 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RBRH_RS02750 6156f517881d11a924e172961f51290e 227 Gene3D G3DSA:3.40.50.300 13 26 2.3E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02750 6156f517881d11a924e172961f51290e 227 Gene3D G3DSA:3.40.50.300 96 209 2.3E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02750 6156f517881d11a924e172961f51290e 227 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 14 192 5.9E-70 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RBRH_RS02750 6156f517881d11a924e172961f51290e 227 Pfam PF00625 Guanylate kinase 16 192 1.1E-46 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RBRH_RS02750 6156f517881d11a924e172961f51290e 227 Gene3D G3DSA:3.30.63.10 55 95 2.9E-25 T 23-04-2016 RBRH_RS02750 6156f517881d11a924e172961f51290e 227 SUPERFAMILY SSF52540 12 197 1.74E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02750 6156f517881d11a924e172961f51290e 227 Gene3D G3DSA:3.40.50.300 27 54 7.9E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02750 6156f517881d11a924e172961f51290e 227 PANTHER PTHR23117 14 223 6.9E-86 T 23-04-2016 RBRH_RS02750 6156f517881d11a924e172961f51290e 227 SMART SM00072 13 195 2.5E-58 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RBRH_RS02750 6156f517881d11a924e172961f51290e 227 ProSitePatterns PS00856 Guanylate kinase-like signature. 48 65 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RBRH_RS02750 6156f517881d11a924e172961f51290e 227 PANTHER PTHR23117:SF13 14 223 6.9E-86 T 23-04-2016 RBRH_RS02750 6156f517881d11a924e172961f51290e 227 Hamap MF_00328 Guanylate kinase [gmk]. 12 195 35.11 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RBRH_RS04465 1ccb6e177f90c1ece5db4ddf149348e9 131 Pfam PF00410 Ribosomal protein S8 5 130 4.1E-51 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04465 1ccb6e177f90c1ece5db4ddf149348e9 131 SUPERFAMILY SSF56047 2 130 1.3E-47 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04465 1ccb6e177f90c1ece5db4ddf149348e9 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.466 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04465 1ccb6e177f90c1ece5db4ddf149348e9 131 Gene3D G3DSA:3.30.1490.10 75 130 7.4E-28 T 23-04-2016 RBRH_RS04465 1ccb6e177f90c1ece5db4ddf149348e9 131 Gene3D G3DSA:3.30.1370.30 2 72 3.4E-29 T 23-04-2016 RBRH_RS04465 1ccb6e177f90c1ece5db4ddf149348e9 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04465 1ccb6e177f90c1ece5db4ddf149348e9 131 PANTHER PTHR11758 1 131 2.0E-59 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PANTHER PTHR22912:SF160 130 596 7.1E-250 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 Gene3D G3DSA:3.30.390.30 480 595 6.8E-42 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 Gene3D G3DSA:3.50.50.60 401 479 3.8E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 179 189 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 465 7.8E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 SUPERFAMILY SSF51905 141 475 2.22E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 SUPERFAMILY SSF55424 483 601 3.09E-36 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 Gene3D G3DSA:3.50.50.60 143 286 7.9E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PANTHER PTHR22912 130 596 7.1E-250 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 Pfam PF00364 Biotin-requiring enzyme 5 76 9.9E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 430 452 2.4E-40 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 313 331 2.4E-40 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 293 2.4E-40 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 401 417 2.4E-40 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 165 2.4E-40 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 338 1.5E-69 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 545 560 1.5E-69 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 167 1.5E-69 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 193 1.5E-69 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 480 501 1.5E-69 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 567 587 1.5E-69 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 278 287 1.5E-69 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 416 1.5E-69 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 445 452 1.5E-69 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 484 592 7.6E-32 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 Gene3D G3DSA:3.50.50.60 294 400 3.9E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 SUPERFAMILY SSF51230 2 81 4.97E-20 T 23-04-2016 IPR011053 Single hybrid motif RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 Gene3D G3DSA:2.40.50.100 4 79 6.4E-20 T 23-04-2016 RBRH_RS08340 77c2a90eea70819693df97e6211a2346 609 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 144 595 4.6E-144 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 Gene3D G3DSA:3.60.120.10 13 493 8.3E-174 T 23-04-2016 IPR005801 ADC synthase GO:0009058 RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 SUPERFAMILY SSF56322 14 491 3.4E-154 T 23-04-2016 IPR005801 ADC synthase GO:0009058 RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 176 2.3E-32 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 PRINTS PR00095 Anthranilate synthase component I signature 344 357 6.0E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 PRINTS PR00095 Anthranilate synthase component I signature 330 343 6.0E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 PRINTS PR00095 Anthranilate synthase component I signature 424 438 6.0E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 PRINTS PR00095 Anthranilate synthase component I signature 439 453 6.0E-24 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 PANTHER PTHR11236 5 495 2.3E-214 T 23-04-2016 RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 Pfam PF00425 chorismate binding enzyme 225 482 6.4E-93 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 490 1.9E-162 T 23-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RBRH_RS05065 00e6c863b4b97bd822e0407b1ca4bffa 501 PANTHER PTHR11236:SF9 5 495 2.3E-214 T 23-04-2016 RBRH_RS10225 9cee808084411d09a0fe09e8acf5ddaf 341 SUPERFAMILY SSF53756 2 337 3.03E-96 T 23-04-2016 RBRH_RS10225 9cee808084411d09a0fe09e8acf5ddaf 341 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 317 8.8E-65 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RBRH_RS10225 9cee808084411d09a0fe09e8acf5ddaf 341 PANTHER PTHR30160:SF7 1 341 3.3E-83 T 23-04-2016 RBRH_RS10225 9cee808084411d09a0fe09e8acf5ddaf 341 PANTHER PTHR30160 1 341 3.3E-83 T 23-04-2016 RBRH_RS10225 9cee808084411d09a0fe09e8acf5ddaf 341 Gene3D G3DSA:3.40.50.2000 170 337 1.1E-55 T 23-04-2016 RBRH_RS10225 9cee808084411d09a0fe09e8acf5ddaf 341 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 337 9.4E-147 T 23-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RBRH_RS10225 9cee808084411d09a0fe09e8acf5ddaf 341 Gene3D G3DSA:3.40.50.2000 3 150 2.0E-51 T 23-04-2016 RBRH_RS10050 ae92c97f2bcb396d5fbbbeb0b90d0166 373 Gene3D G3DSA:3.40.190.10 177 261 1.8E-21 T 23-04-2016 RBRH_RS10050 ae92c97f2bcb396d5fbbbeb0b90d0166 373 PANTHER PTHR30537:SF5 1 312 1.4E-83 T 23-04-2016 RBRH_RS10050 ae92c97f2bcb396d5fbbbeb0b90d0166 373 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.2E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS10050 ae92c97f2bcb396d5fbbbeb0b90d0166 373 Gene3D G3DSA:3.40.190.10 92 176 1.2E-12 T 23-04-2016 RBRH_RS10050 ae92c97f2bcb396d5fbbbeb0b90d0166 373 Pfam PF03466 LysR substrate binding domain 88 292 1.9E-36 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS10050 ae92c97f2bcb396d5fbbbeb0b90d0166 373 PANTHER PTHR30537 1 312 1.4E-83 T 23-04-2016 RBRH_RS10050 ae92c97f2bcb396d5fbbbeb0b90d0166 373 Gene3D G3DSA:1.10.10.10 3 83 6.6E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10050 ae92c97f2bcb396d5fbbbeb0b90d0166 373 SUPERFAMILY SSF53850 88 298 1.37E-38 T 23-04-2016 RBRH_RS10050 ae92c97f2bcb396d5fbbbeb0b90d0166 373 SUPERFAMILY SSF46785 4 87 3.94E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS00160 572b1ff9fc9db41369c9b9f7ffb3a0a7 658 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS00160 572b1ff9fc9db41369c9b9f7ffb3a0a7 658 Gene3D G3DSA:3.40.50.300 4 227 1.3E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00160 572b1ff9fc9db41369c9b9f7ffb3a0a7 658 PANTHER PTHR24220 7 228 5.1E-105 T 23-04-2016 RBRH_RS00160 572b1ff9fc9db41369c9b9f7ffb3a0a7 658 Pfam PF12704 MacB-like periplasmic core domain 282 501 8.6E-38 T 23-04-2016 IPR025857 MacB-like periplasmic core domain RBRH_RS00160 572b1ff9fc9db41369c9b9f7ffb3a0a7 658 SUPERFAMILY SSF52540 5 233 1.33E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00160 572b1ff9fc9db41369c9b9f7ffb3a0a7 658 Pfam PF02687 FtsX-like permease family 537 651 8.9E-19 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RBRH_RS00160 572b1ff9fc9db41369c9b9f7ffb3a0a7 658 PANTHER PTHR24220:SF86 7 228 5.1E-105 T 23-04-2016 RBRH_RS00160 572b1ff9fc9db41369c9b9f7ffb3a0a7 658 SMART SM00382 34 221 4.1E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS00160 572b1ff9fc9db41369c9b9f7ffb3a0a7 658 Pfam PF00005 ABC transporter 25 173 2.7E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS07125 a8720feae4228cd53a9fd15426d8a943 143 PANTHER PTHR34235 5 143 1.5E-49 T 23-04-2016 RBRH_RS07125 a8720feae4228cd53a9fd15426d8a943 143 PANTHER PTHR34235:SF3 5 143 1.5E-49 T 23-04-2016 RBRH_RS07125 a8720feae4228cd53a9fd15426d8a943 143 Pfam PF01724 Domain of unknown function DUF29 5 141 3.3E-49 T 23-04-2016 IPR002636 Protein from unkown function DUF29 RBRH_RS00355 be99de02ddc7c81dd4d4319246bfacb4 377 SUPERFAMILY SSF54523 55 111 7.69E-6 T 23-04-2016 RBRH_RS00355 be99de02ddc7c81dd4d4319246bfacb4 377 SUPERFAMILY SSF54523 337 364 7.69E-6 T 23-04-2016 RBRH_RS00355 be99de02ddc7c81dd4d4319246bfacb4 377 PIRSF PIRSF002786 19 377 6.6E-78 T 23-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RBRH_RS00355 be99de02ddc7c81dd4d4319246bfacb4 377 SUPERFAMILY SSF158544 224 272 1.49E-10 T 23-04-2016 RBRH_RS00355 be99de02ddc7c81dd4d4319246bfacb4 377 SUPERFAMILY SSF158544 136 187 1.49E-10 T 23-04-2016 RBRH_RS00355 be99de02ddc7c81dd4d4319246bfacb4 377 Pfam PF03934 Type II secretion system (T2SS), protein K 49 370 2.8E-72 T 23-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RBRH_RS01810 19ea8afd68ead7c616e5c801ce7b212d 473 Gene3D G3DSA:1.10.45.10 427 466 1.6E-15 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RBRH_RS01810 19ea8afd68ead7c616e5c801ce7b212d 473 PANTHER PTHR11748 17 467 9.2E-219 T 23-04-2016 RBRH_RS01810 19ea8afd68ead7c616e5c801ce7b212d 473 Pfam PF02913 FAD linked oxidases, C-terminal domain 226 466 4.8E-64 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RBRH_RS01810 19ea8afd68ead7c616e5c801ce7b212d 473 PANTHER PTHR11748:SF97 17 467 9.2E-219 T 23-04-2016 RBRH_RS01810 19ea8afd68ead7c616e5c801ce7b212d 473 SUPERFAMILY SSF56176 13 226 8.41E-70 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS01810 19ea8afd68ead7c616e5c801ce7b212d 473 SUPERFAMILY SSF55103 229 467 3.6E-73 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RBRH_RS01810 19ea8afd68ead7c616e5c801ce7b212d 473 Gene3D G3DSA:3.30.43.10 9 107 1.4E-28 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RBRH_RS01810 19ea8afd68ead7c616e5c801ce7b212d 473 Pfam PF01565 FAD binding domain 52 188 2.5E-38 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RBRH_RS01810 19ea8afd68ead7c616e5c801ce7b212d 473 Gene3D G3DSA:3.30.465.10 108 226 5.5E-44 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 Gene3D G3DSA:1.10.3090.10 128 365 1.1E-52 T 23-04-2016 RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 Gene3D G3DSA:3.30.460.10 2 127 2.7E-29 T 23-04-2016 RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 SUPERFAMILY SSF81301 1 125 1.2E-28 T 23-04-2016 RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 Hamap MF_01262 CCA-adding enzyme [cca]. 1 405 39.099 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 PIRSF PIRSF000813 1 413 2.6E-191 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 PANTHER PTHR13734 1 305 6.3E-64 T 23-04-2016 RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 PANTHER PTHR13734 369 385 6.3E-64 T 23-04-2016 RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 SUPERFAMILY SSF81891 127 363 1.27E-51 T 23-04-2016 RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 153 215 1.4E-12 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 412 52.26 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RBRH_RS11735 1007ff859e5abb291a8630e831e96dee 414 Pfam PF01743 Poly A polymerase head domain 3 127 7.1E-17 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RBRH_RS01275 c09fc60e0dc847d60c2d9b707c382e1a 389 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 387 23.534 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01275 c09fc60e0dc847d60c2d9b707c382e1a 389 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01275 c09fc60e0dc847d60c2d9b707c382e1a 389 PANTHER PTHR22926:SF5 2 152 2.0E-159 T 23-04-2016 RBRH_RS01275 c09fc60e0dc847d60c2d9b707c382e1a 389 PANTHER PTHR22926:SF5 175 389 2.0E-159 T 23-04-2016 RBRH_RS01275 c09fc60e0dc847d60c2d9b707c382e1a 389 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 389 1.5E-119 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01275 c09fc60e0dc847d60c2d9b707c382e1a 389 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.8E-6 T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01275 c09fc60e0dc847d60c2d9b707c382e1a 389 PANTHER PTHR22926 2 152 2.0E-159 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01275 c09fc60e0dc847d60c2d9b707c382e1a 389 PANTHER PTHR22926 175 389 2.0E-159 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01275 c09fc60e0dc847d60c2d9b707c382e1a 389 ProSitePatterns PS01348 MraY family signature 2. 212 223 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01275 c09fc60e0dc847d60c2d9b707c382e1a 389 Pfam PF00953 Glycosyl transferase family 4 99 307 4.2E-33 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 PANTHER PTHR22931:SF28 70 560 1.4E-153 T 23-04-2016 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 PIRSF PIRSF000732 1 581 4.1E-208 T 23-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 474 489 1.8E-24 T 23-04-2016 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 301 320 1.8E-24 T 23-04-2016 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 510 522 1.8E-24 T 23-04-2016 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 457 472 1.8E-24 T 23-04-2016 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 192 203 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 SUPERFAMILY SSF52009 128 252 9.55E-32 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 260 551 7.7E-110 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 SUPERFAMILY SSF51621 257 557 5.5E-99 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 SUPERFAMILY SSF47831 28 146 2.62E-30 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 PANTHER PTHR22931 70 560 1.4E-153 T 23-04-2016 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 457 475 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 Gene3D G3DSA:3.20.20.60 264 578 3.9E-101 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 Gene3D G3DSA:1.10.274.10 28 135 2.2E-33 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 3.1E-29 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 Pfam PF00391 PEP-utilising enzyme, mobile domain 161 233 2.8E-23 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 Gene3D G3DSA:3.50.30.10 136 263 1.6E-42 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RBRH_RS11280 555ceca065dadad215c49c2d7dfbd880 581 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 573 1.4E-162 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RBRH_RS08550 5f00ad100116c7d58addb074300331fe 415 PANTHER PTHR11680:SF9 1 414 2.6E-255 T 23-04-2016 RBRH_RS08550 5f00ad100116c7d58addb074300331fe 415 Pfam PF00464 Serine hydroxymethyltransferase 10 384 5.8E-174 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RBRH_RS08550 5f00ad100116c7d58addb074300331fe 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RBRH_RS08550 5f00ad100116c7d58addb074300331fe 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 415 52.724 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RBRH_RS08550 5f00ad100116c7d58addb074300331fe 415 SUPERFAMILY SSF53383 7 414 2.09E-179 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS08550 5f00ad100116c7d58addb074300331fe 415 PANTHER PTHR11680 1 414 2.6E-255 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RBRH_RS08550 5f00ad100116c7d58addb074300331fe 415 Gene3D G3DSA:3.90.1150.10 284 415 1.6E-55 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS08550 5f00ad100116c7d58addb074300331fe 415 Gene3D G3DSA:3.40.640.10 38 283 1.9E-105 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS08550 5f00ad100116c7d58addb074300331fe 415 PIRSF PIRSF000412 1 415 1.0E-167 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RBRH_RS11745 6b5ea5d8130be4199f9d7a9b380aa2b9 207 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 23 202 4.9E-40 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RBRH_RS11745 6b5ea5d8130be4199f9d7a9b380aa2b9 207 PANTHER PTHR23407 14 204 1.2E-32 T 23-04-2016 RBRH_RS11745 6b5ea5d8130be4199f9d7a9b380aa2b9 207 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 23 202 7.1E-27 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RBRH_RS11745 6b5ea5d8130be4199f9d7a9b380aa2b9 207 Gene3D G3DSA:3.40.50.10420 23 205 5.5E-42 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RBRH_RS11745 6b5ea5d8130be4199f9d7a9b380aa2b9 207 PIRSF PIRSF006806 19 205 1.4E-30 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RBRH_RS11745 6b5ea5d8130be4199f9d7a9b380aa2b9 207 SUPERFAMILY SSF100950 23 205 7.53E-43 T 23-04-2016 RBRH_RS11745 6b5ea5d8130be4199f9d7a9b380aa2b9 207 PANTHER PTHR23407:SF1 14 204 1.2E-32 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 PANTHER PTHR26402:SF576 3 229 4.8E-114 T 23-04-2016 RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 4.4E-27 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 PANTHER PTHR26402 3 229 4.8E-114 T 23-04-2016 RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 SMART SM00862 152 229 9.2E-29 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 Pfam PF00072 Response regulator receiver domain 5 117 5.9E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 SMART SM00448 3 116 2.0E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 Gene3D G3DSA:3.40.50.2300 3 126 9.5E-40 T 23-04-2016 RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 SUPERFAMILY SSF52172 3 127 1.85E-41 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 SUPERFAMILY SSF46894 124 229 2.83E-28 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 229 1.4E-105 T 23-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 RBRH_RS03655 21e84d9291d61711dc4629340eb887be 233 Gene3D G3DSA:1.10.10.10 129 231 6.6E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS00370 e77cbdc1244a0eba2c524a7e285246ef 170 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 22 169 7.1E-25 T 23-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RBRH_RS00370 e77cbdc1244a0eba2c524a7e285246ef 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 24 45 8.8E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS00370 e77cbdc1244a0eba2c524a7e285246ef 170 Gene3D G3DSA:3.55.40.10 56 119 5.2E-5 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RBRH_RS00370 e77cbdc1244a0eba2c524a7e285246ef 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 24 44 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS00370 e77cbdc1244a0eba2c524a7e285246ef 170 Pfam PF12019 Type II transport protein GspH 60 165 1.7E-6 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RBRH_RS00370 e77cbdc1244a0eba2c524a7e285246ef 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 25 42 7.2E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS00370 e77cbdc1244a0eba2c524a7e285246ef 170 SUPERFAMILY SSF54523 26 107 2.51E-11 T 23-04-2016 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 Pfam PF00224 Pyruvate kinase, barrel domain 3 340 1.3E-118 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 Gene3D G3DSA:3.40.1380.20 329 474 5.4E-39 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 SUPERFAMILY SSF51621 166 340 1.5E-92 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 SUPERFAMILY SSF51621 2 76 1.5E-92 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 Gene3D G3DSA:2.40.33.10 74 167 4.8E-26 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 474 4.9E-157 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 PANTHER PTHR11817 1 478 4.3E-231 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 SUPERFAMILY SSF50800 71 164 1.34E-23 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 PANTHER PTHR11817:SF17 1 478 4.3E-231 T 23-04-2016 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 SUPERFAMILY SSF52935 325 475 1.02E-38 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 472 3.0E-29 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 PRINTS PR01050 Pyruvate kinase family signature 60 76 5.8E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 PRINTS PR01050 Pyruvate kinase family signature 296 314 5.8E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 PRINTS PR01050 Pyruvate kinase family signature 246 270 5.8E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 PRINTS PR01050 Pyruvate kinase family signature 219 245 5.8E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 PRINTS PR01050 Pyruvate kinase family signature 271 295 5.8E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 PRINTS PR01050 Pyruvate kinase family signature 185 199 5.8E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 PRINTS PR01050 Pyruvate kinase family signature 315 331 5.8E-59 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 Gene3D G3DSA:3.20.20.60 3 73 1.5E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS10195 fb96f039fb18db27c6ddd5486b9dcc09 478 Gene3D G3DSA:3.20.20.60 168 328 1.5E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS09165 5f83051b99344e5c5db1945d1b2ee381 269 Pfam PF11304 Protein of unknown function (DUF3106) 71 170 7.7E-31 T 23-04-2016 IPR021455 Protein of unknown function DUF3106 RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 2.7E-86 T 23-04-2016 RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 PANTHER PTHR24322 159 191 6.7E-60 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 PANTHER PTHR24322 11 143 6.7E-60 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 PIRSF PIRSF000094 1 257 1.0E-112 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 SUPERFAMILY SSF51735 6 253 4.59E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 PANTHER PTHR24322:SF317 159 191 6.7E-60 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 PANTHER PTHR24322:SF317 11 143 6.7E-60 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.3E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.3E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.3E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05535 1e2d9ccd1607344595c9750013d72e1f 263 Gene3D G3DSA:3.40.50.720 6 201 1.2E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS12220 fd31451843254ee505a9cdfc81a7f8cb 76 Pfam PF01809 Haemolytic domain 3 68 8.3E-28 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RBRH_RS12220 fd31451843254ee505a9cdfc81a7f8cb 76 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 9.0E-22 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RBRH_RS12220 fd31451843254ee505a9cdfc81a7f8cb 76 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 71 1.8E-24 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RBRH_RS12220 fd31451843254ee505a9cdfc81a7f8cb 76 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.361 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RBRH_RS12220 fd31451843254ee505a9cdfc81a7f8cb 76 PANTHER PTHR33383 1 70 5.5E-36 T 23-04-2016 RBRH_RS12220 fd31451843254ee505a9cdfc81a7f8cb 76 SMART SM01234 1 68 1.6E-40 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 2.1E-251 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 406 417 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 6.2E-93 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 Gene3D G3DSA:1.10.560.10 370 519 8.2E-42 T 23-04-2016 IPR027413 GroEL-like equatorial domain RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 SUPERFAMILY SSF52029 186 377 8.07E-84 T 23-04-2016 IPR027409 GroEL-like apical domain RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 SUPERFAMILY SSF54849 138 204 1.03E-24 T 23-04-2016 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 PANTHER PTHR11353 2 547 1.3E-241 T 23-04-2016 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 Gene3D G3DSA:3.50.7.10 190 369 2.8E-101 T 23-04-2016 IPR027409 GroEL-like apical domain RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 PRINTS PR00298 60kDa chaperonin signature 269 292 1.5E-65 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 PRINTS PR00298 60kDa chaperonin signature 351 376 1.5E-65 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 PRINTS PR00298 60kDa chaperonin signature 27 53 1.5E-65 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 PRINTS PR00298 60kDa chaperonin signature 83 110 1.5E-65 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 PRINTS PR00298 60kDa chaperonin signature 399 420 1.5E-65 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 40.855 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 SUPERFAMILY SSF48592 7 135 2.66E-71 T 23-04-2016 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 SUPERFAMILY SSF48592 407 522 2.66E-71 T 23-04-2016 RBRH_RS10015 84f9c7ce0b98385e85e2dbeb1df05ac1 547 Gene3D G3DSA:1.10.560.10 4 189 5.6E-42 T 23-04-2016 IPR027413 GroEL-like equatorial domain RBRH_RS07945 2b8e353080a8dba44cfd0a32ebdbc7f1 193 PANTHER PTHR35585 1 149 2.5E-17 T 23-04-2016 RBRH_RS07945 2b8e353080a8dba44cfd0a32ebdbc7f1 193 Gene3D G3DSA:1.20.120.520 36 146 2.4E-15 T 23-04-2016 RBRH_RS07945 2b8e353080a8dba44cfd0a32ebdbc7f1 193 Pfam PF01814 Hemerythrin HHE cation binding domain 12 127 7.6E-14 T 23-04-2016 IPR012312 Haemerythrin-like RBRH_RS07605 38998f7e9462366cac1966b33d00a678 349 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 38 345 3.1E-145 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RBRH_RS07605 38998f7e9462366cac1966b33d00a678 349 SUPERFAMILY SSF53850 39 347 2.03E-93 T 23-04-2016 RBRH_RS07605 38998f7e9462366cac1966b33d00a678 349 Pfam PF13531 Bacterial extracellular solute-binding protein 60 299 4.2E-45 T 23-04-2016 RBRH_RS07605 38998f7e9462366cac1966b33d00a678 349 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 164 172 - T 23-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 RBRH_RS07605 38998f7e9462366cac1966b33d00a678 349 PANTHER PTHR30368 31 349 2.0E-180 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RBRH_RS07605 38998f7e9462366cac1966b33d00a678 349 PANTHER PTHR30368:SF2 31 349 2.0E-180 T 23-04-2016 RBRH_RS07605 38998f7e9462366cac1966b33d00a678 349 Gene3D G3DSA:3.40.190.10 40 182 1.1E-52 T 23-04-2016 RBRH_RS07605 38998f7e9462366cac1966b33d00a678 349 Gene3D G3DSA:3.40.190.10 191 314 1.1E-26 T 23-04-2016 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 SUPERFAMILY SSF53738 262 369 4.71E-28 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 PANTHER PTHR22573 2 444 6.6E-149 T 23-04-2016 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 SUPERFAMILY SSF53738 160 259 3.88E-28 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 Gene3D G3DSA:3.40.120.10 255 362 8.9E-31 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 139 4.3E-43 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 SUPERFAMILY SSF53738 2 185 3.1E-49 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 SUPERFAMILY SSF55957 362 448 9.29E-21 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 178 197 1.4E-13 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 1.4E-13 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 1.4E-13 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 448 45.883 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 PANTHER PTHR22573:SF15 2 444 6.6E-149 T 23-04-2016 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 258 7.3E-18 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 446 3.0E-176 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 Gene3D G3DSA:3.40.120.10 180 254 2.8E-24 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 Gene3D G3DSA:3.30.310.50 363 444 1.4E-14 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 Gene3D G3DSA:3.40.120.10 3 156 2.9E-46 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 443 5.9E-15 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS03625 256af02e9ac3d600f2381d63996bef5d 451 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 367 6.3E-30 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Gene3D G3DSA:3.40.50.300 6 293 2.5E-102 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Gene3D G3DSA:3.30.70.870 411 485 4.6E-39 T 23-04-2016 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Gene3D G3DSA:3.30.70.240 605 692 9.9E-35 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PANTHER PTHR23115:SF66 6 184 0.0 T 23-04-2016 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 SUPERFAMILY SSF54980 609 697 4.75E-30 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Gene3D G3DSA:2.40.30.10 310 410 1.4E-39 T 23-04-2016 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 SUPERFAMILY SSF52540 6 288 3.44E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 SMART SM00838 606 694 5.2E-56 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PANTHER PTHR23115:SF66 308 698 0.0 T 23-04-2016 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PANTHER PTHR23115:SF66 261 289 0.0 T 23-04-2016 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Pfam PF03764 Elongation factor G, domain IV 484 604 1.8E-47 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.3E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Pfam PF14492 Elongation Factor G, domain II 409 483 6.9E-35 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.1E-64 T 23-04-2016 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 SUPERFAMILY SSF54980 409 486 1.22E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Pfam PF00679 Elongation factor G C-terminus 606 693 4.5E-32 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PANTHER PTHR23115 261 289 0.0 T 23-04-2016 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 185 2.1E-30 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PANTHER PTHR23115 308 698 0.0 T 23-04-2016 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 699 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 4.8E-19 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Gene3D G3DSA:3.30.230.10 489 604 2.0E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 111.472 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 PANTHER PTHR23115 6 184 0.0 T 23-04-2016 RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 SUPERFAMILY SSF50447 271 407 4.42E-36 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 SUPERFAMILY SSF54211 484 605 5.82E-44 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS04380 dffb29bd662dff0debdb97d880f8b6f4 700 SMART SM00889 485 604 1.5E-74 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RBRH_RS11675 a1e2a7f226a6289a6bd8e312f3be0dff 213 PANTHER PTHR34183:SF1 98 209 3.3E-52 T 23-04-2016 RBRH_RS11675 a1e2a7f226a6289a6bd8e312f3be0dff 213 Gene3D G3DSA:2.40.40.10 143 191 2.8E-6 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RBRH_RS11675 a1e2a7f226a6289a6bd8e312f3be0dff 213 SUPERFAMILY SSF50685 108 191 1.74E-11 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RBRH_RS11675 a1e2a7f226a6289a6bd8e312f3be0dff 213 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 106 198 3.0E-44 T 23-04-2016 IPR012997 Rare lipoprotein A RBRH_RS11675 a1e2a7f226a6289a6bd8e312f3be0dff 213 PANTHER PTHR34183 98 209 3.3E-52 T 23-04-2016 RBRH_RS11675 a1e2a7f226a6289a6bd8e312f3be0dff 213 Pfam PF03330 Lytic transglycolase 104 192 1.2E-25 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RBRH_RS09385 cbf9f6435b09313940f7c9e63d03b1f8 125 Pfam PF00034 Cytochrome c 35 118 3.6E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS09385 cbf9f6435b09313940f7c9e63d03b1f8 125 PRINTS PR00605 Class IC cytochrome C signature 92 114 1.3E-5 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RBRH_RS09385 cbf9f6435b09313940f7c9e63d03b1f8 125 PRINTS PR00605 Class IC cytochrome C signature 43 54 1.3E-5 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RBRH_RS09385 cbf9f6435b09313940f7c9e63d03b1f8 125 Gene3D G3DSA:1.10.760.10 21 118 2.2E-24 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS09385 cbf9f6435b09313940f7c9e63d03b1f8 125 PANTHER PTHR33751 1 123 1.4E-14 T 23-04-2016 RBRH_RS09385 cbf9f6435b09313940f7c9e63d03b1f8 125 SUPERFAMILY SSF46626 14 118 4.87E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS06485 f61d900242b48ecf6d71be08d6f53dfd 164 SUPERFAMILY SSF111384 18 158 6.8E-36 T 23-04-2016 IPR024930 Skp domain RBRH_RS06485 f61d900242b48ecf6d71be08d6f53dfd 164 PANTHER PTHR35089:SF1 1 164 1.4E-33 T 23-04-2016 RBRH_RS06485 f61d900242b48ecf6d71be08d6f53dfd 164 Pfam PF03938 Outer membrane protein (OmpH-like) 5 158 3.2E-35 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RBRH_RS06485 f61d900242b48ecf6d71be08d6f53dfd 164 Gene3D G3DSA:3.30.910.20 10 56 4.2E-31 T 23-04-2016 RBRH_RS06485 f61d900242b48ecf6d71be08d6f53dfd 164 Gene3D G3DSA:3.30.910.20 94 158 4.2E-31 T 23-04-2016 RBRH_RS06485 f61d900242b48ecf6d71be08d6f53dfd 164 PIRSF PIRSF002094 1 162 3.8E-49 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RBRH_RS06485 f61d900242b48ecf6d71be08d6f53dfd 164 PANTHER PTHR35089 1 164 1.4E-33 T 23-04-2016 RBRH_RS06485 f61d900242b48ecf6d71be08d6f53dfd 164 SMART SM00935 7 159 5.5E-55 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RBRH_RS09725 ba39fbfebaed6fd91c9cee412f46a958 172 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 148 9.3E-49 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09725 ba39fbfebaed6fd91c9cee412f46a958 172 PANTHER PTHR21058 11 157 8.3E-60 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09725 ba39fbfebaed6fd91c9cee412f46a958 172 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 151 27.884 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09725 ba39fbfebaed6fd91c9cee412f46a958 172 Gene3D G3DSA:3.40.50.960 7 151 2.2E-54 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09725 ba39fbfebaed6fd91c9cee412f46a958 172 SUPERFAMILY SSF52121 6 151 5.76E-53 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09725 ba39fbfebaed6fd91c9cee412f46a958 172 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 146 2.2E-39 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS00810 d595e46d7152578bd54f93ababbabd23 92 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 85 1.6E-22 T 23-04-2016 IPR008473 Putative 3TM holin, Phage holin 3 RBRH_RS04155 588f4d0d1e2f60d67868ce782b4c9820 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 84 100 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RBRH_RS04155 588f4d0d1e2f60d67868ce782b4c9820 296 PANTHER PTHR12001 6 296 5.5E-96 T 23-04-2016 IPR017446 Polyprenyl synthetase-related RBRH_RS04155 588f4d0d1e2f60d67868ce782b4c9820 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RBRH_RS04155 588f4d0d1e2f60d67868ce782b4c9820 296 SUPERFAMILY SSF48576 6 288 4.11E-80 T 23-04-2016 IPR008949 Isoprenoid synthase domain RBRH_RS04155 588f4d0d1e2f60d67868ce782b4c9820 296 PANTHER PTHR12001:SF23 6 296 5.5E-96 T 23-04-2016 RBRH_RS04155 588f4d0d1e2f60d67868ce782b4c9820 296 Gene3D G3DSA:1.10.600.10 4 289 6.2E-86 T 23-04-2016 IPR008949 Isoprenoid synthase domain RBRH_RS04155 588f4d0d1e2f60d67868ce782b4c9820 296 Pfam PF00348 Polyprenyl synthetase 34 266 1.2E-51 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RBRH_RS08010 e2390d078927eaa5ab0fead7b85dd308 163 PANTHER PTHR11071 1 163 4.4E-75 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RBRH_RS08010 e2390d078927eaa5ab0fead7b85dd308 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 4.4E-14 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RBRH_RS08010 e2390d078927eaa5ab0fead7b85dd308 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 4.4E-14 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RBRH_RS08010 e2390d078927eaa5ab0fead7b85dd308 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 4.4E-14 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RBRH_RS08010 e2390d078927eaa5ab0fead7b85dd308 163 Gene3D G3DSA:2.40.100.10 2 162 2.0E-55 T 23-04-2016 IPR029000 Cyclophilin-like domain RBRH_RS08010 e2390d078927eaa5ab0fead7b85dd308 163 SUPERFAMILY SSF50891 1 162 6.87E-60 T 23-04-2016 IPR029000 Cyclophilin-like domain RBRH_RS08010 e2390d078927eaa5ab0fead7b85dd308 163 PIRSF PIRSF001467 1 163 3.5E-28 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RBRH_RS08010 e2390d078927eaa5ab0fead7b85dd308 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RBRH_RS08010 e2390d078927eaa5ab0fead7b85dd308 163 PANTHER PTHR11071:SF192 1 163 4.4E-75 T 23-04-2016 RBRH_RS08010 e2390d078927eaa5ab0fead7b85dd308 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 160 7.1E-50 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RBRH_RS04390 790099b20bdb4d01bafcd92272b5950c 103 PANTHER PTHR11700 1 102 1.3E-42 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04390 790099b20bdb4d01bafcd92272b5950c 103 SMART SM01403 7 101 1.1E-49 T 23-04-2016 IPR027486 Ribosomal protein S10 domain RBRH_RS04390 790099b20bdb4d01bafcd92272b5950c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.166 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04390 790099b20bdb4d01bafcd92272b5950c 103 SUPERFAMILY SSF54999 5 102 2.09E-34 T 23-04-2016 IPR027486 Ribosomal protein S10 domain RBRH_RS04390 790099b20bdb4d01bafcd92272b5950c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.0E-42 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04390 790099b20bdb4d01bafcd92272b5950c 103 Gene3D G3DSA:3.30.70.600 4 102 1.1E-38 T 23-04-2016 IPR027486 Ribosomal protein S10 domain RBRH_RS04390 790099b20bdb4d01bafcd92272b5950c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 3.1E-31 T 23-04-2016 IPR027486 Ribosomal protein S10 domain RBRH_RS04390 790099b20bdb4d01bafcd92272b5950c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.5E-15 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04390 790099b20bdb4d01bafcd92272b5950c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.5E-15 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04390 790099b20bdb4d01bafcd92272b5950c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.5E-15 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RBRH_RS09880 0de7c082a7180bbaf58d50b8ed8be93b 318 SUPERFAMILY SSF51735 5 316 2.97E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09880 0de7c082a7180bbaf58d50b8ed8be93b 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 229 9.1E-33 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RBRH_RS09880 0de7c082a7180bbaf58d50b8ed8be93b 318 PANTHER PTHR10366:SF329 3 314 4.8E-81 T 23-04-2016 RBRH_RS09880 0de7c082a7180bbaf58d50b8ed8be93b 318 Gene3D G3DSA:3.40.50.720 5 310 7.5E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09880 0de7c082a7180bbaf58d50b8ed8be93b 318 PANTHER PTHR10366 3 314 4.8E-81 T 23-04-2016 RBRH_RS01925 7ab8ce389593e7b785515108b43395e6 353 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 15 342 7.5E-140 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS01925 7ab8ce389593e7b785515108b43395e6 353 Pfam PF00586 AIR synthase related protein, N-terminal domain 72 172 1.5E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RBRH_RS01925 7ab8ce389593e7b785515108b43395e6 353 Gene3D G3DSA:3.90.650.10 180 350 8.5E-68 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RBRH_RS01925 7ab8ce389593e7b785515108b43395e6 353 SUPERFAMILY SSF55326 16 178 1.03E-53 T 23-04-2016 RBRH_RS01925 7ab8ce389593e7b785515108b43395e6 353 PANTHER PTHR10520 15 352 4.7E-209 T 23-04-2016 RBRH_RS01925 7ab8ce389593e7b785515108b43395e6 353 SUPERFAMILY SSF56042 179 347 5.38E-59 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RBRH_RS01925 7ab8ce389593e7b785515108b43395e6 353 Pfam PF02769 AIR synthase related protein, C-terminal domain 185 346 3.1E-34 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RBRH_RS01925 7ab8ce389593e7b785515108b43395e6 353 Gene3D G3DSA:3.30.1330.10 30 178 6.2E-64 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RBRH_RS01925 7ab8ce389593e7b785515108b43395e6 353 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 15 351 47.262 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 SUPERFAMILY SSF52954 333 434 1.66E-19 T 23-04-2016 IPR004154 Anticodon-binding RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 Gene3D G3DSA:3.40.50.800 332 433 8.8E-30 T 23-04-2016 IPR004154 Anticodon-binding RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 Pfam PF03129 Anticodon binding domain 336 433 9.2E-9 T 23-04-2016 IPR004154 Anticodon-binding RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 14 410 8.3E-150 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 PANTHER PTHR11476:SF9 1 440 2.7E-193 T 23-04-2016 RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 PIRSF PIRSF001549 7 435 7.1E-112 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 Gene3D G3DSA:3.30.930.10 227 329 2.7E-92 T 23-04-2016 RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 Gene3D G3DSA:3.30.930.10 13 191 2.7E-92 T 23-04-2016 RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 9 434 32.125 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 SUPERFAMILY SSF55681 14 324 7.08E-100 T 23-04-2016 RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 Pfam PF13393 Histidyl-tRNA synthetase 16 318 4.9E-51 T 23-04-2016 RBRH_RS05800 209b19e895e927fbf844325e8123e9f5 445 PANTHER PTHR11476 1 440 2.7E-193 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RBRH_RS11935 69e07c10abe9b1ff5b1786eb093828a9 180 Gene3D G3DSA:3.40.50.2300 5 125 2.4E-28 T 23-04-2016 RBRH_RS11935 69e07c10abe9b1ff5b1786eb093828a9 180 Gene3D G3DSA:1.10.10.60 126 178 7.4E-27 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS11935 69e07c10abe9b1ff5b1786eb093828a9 180 SMART SM00448 4 115 1.2E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS11935 69e07c10abe9b1ff5b1786eb093828a9 180 PANTHER PTHR26402 4 116 1.6E-37 T 23-04-2016 RBRH_RS11935 69e07c10abe9b1ff5b1786eb093828a9 180 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 159 179 1.3E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS11935 69e07c10abe9b1ff5b1786eb093828a9 180 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 142 159 1.3E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS11935 69e07c10abe9b1ff5b1786eb093828a9 180 SUPERFAMILY SSF52172 1 164 3.13E-29 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS11935 69e07c10abe9b1ff5b1786eb093828a9 180 Pfam PF00072 Response regulator receiver domain 7 115 8.1E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS11935 69e07c10abe9b1ff5b1786eb093828a9 180 Pfam PF02954 Bacterial regulatory protein, Fis family 136 175 8.7E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS11935 69e07c10abe9b1ff5b1786eb093828a9 180 PANTHER PTHR26402:SF344 4 116 1.6E-37 T 23-04-2016 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 Pfam PF00162 Phosphoglycerate kinase 12 385 8.5E-138 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 Gene3D G3DSA:3.40.50.1260 11 181 3.0E-62 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 SUPERFAMILY SSF53748 11 395 1.11E-138 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 395 38.731 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PIRSF PIRSF000724 3 401 3.6E-137 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PANTHER PTHR11406 4 399 2.1E-185 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 20 30 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 4.7E-80 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PRINTS PR00477 Phosphoglycerate kinase family signature 348 359 4.7E-80 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PRINTS PR00477 Phosphoglycerate kinase family signature 371 388 4.7E-80 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PRINTS PR00477 Phosphoglycerate kinase family signature 139 161 4.7E-80 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PRINTS PR00477 Phosphoglycerate kinase family signature 37 59 4.7E-80 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PRINTS PR00477 Phosphoglycerate kinase family signature 315 340 4.7E-80 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 4.7E-80 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PRINTS PR00477 Phosphoglycerate kinase family signature 111 126 4.7E-80 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 PRINTS PR00477 Phosphoglycerate kinase family signature 15 31 4.7E-80 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS10200 e39687419a3cad89b3e85f93f125847b 404 Gene3D G3DSA:3.40.50.1270 182 383 3.3E-81 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 TIGRFAM TIGR00498 lexA: repressor LexA 1 212 7.3E-66 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 Pfam PF01726 LexA DNA binding domain 1 65 5.6E-27 T 23-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 Gene3D G3DSA:1.10.10.10 1 69 1.3E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 SUPERFAMILY SSF51306 89 211 6.8E-35 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 PANTHER PTHR33516:SF2 1 215 2.8E-85 T 23-04-2016 RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 PANTHER PTHR33516 1 215 2.8E-85 T 23-04-2016 RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 SUPERFAMILY SSF46785 3 70 2.07E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 Gene3D G3DSA:2.10.109.10 90 211 3.2E-40 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 135 2.5E-9 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 164 176 2.5E-9 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 136 147 2.5E-9 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 Pfam PF00717 Peptidase S24-like 128 193 2.3E-15 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B RBRH_RS07610 2adf7bf6ca20d029015c851700eede5a 215 Hamap MF_00015 LexA repressor [lexA]. 3 213 30.374 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RBRH_RS01955 52dd77c65453e7c4f47aedf532deb6f1 383 PANTHER PTHR30002 14 381 7.1E-156 T 23-04-2016 RBRH_RS01955 52dd77c65453e7c4f47aedf532deb6f1 383 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 220 231 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS01955 52dd77c65453e7c4f47aedf532deb6f1 383 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 19 342 49.102 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01955 52dd77c65453e7c4f47aedf532deb6f1 383 PANTHER PTHR30002:SF4 14 381 7.1E-156 T 23-04-2016 RBRH_RS01955 52dd77c65453e7c4f47aedf532deb6f1 383 Pfam PF13484 4Fe-4S double cluster binding domain 219 283 2.7E-20 T 23-04-2016 RBRH_RS01955 52dd77c65453e7c4f47aedf532deb6f1 383 Pfam PF08331 Domain of unknown function (DUF1730) 74 158 1.1E-22 T 23-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01955 52dd77c65453e7c4f47aedf532deb6f1 383 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 26 381 1.1E-136 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01955 52dd77c65453e7c4f47aedf532deb6f1 383 Gene3D G3DSA:3.30.70.20 210 283 6.4E-7 T 23-04-2016 RBRH_RS01955 52dd77c65453e7c4f47aedf532deb6f1 383 SUPERFAMILY SSF46548 159 283 7.85E-17 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RBRH_RS05590 d9a246077501cac8c92f3a5807ab5779 554 SUPERFAMILY SSF52540 293 523 3.44E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05590 d9a246077501cac8c92f3a5807ab5779 554 Gene3D G3DSA:3.40.50.300 297 523 6.6E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05590 d9a246077501cac8c92f3a5807ab5779 554 SMART SM00382 324 525 2.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05590 d9a246077501cac8c92f3a5807ab5779 554 Pfam PF00005 ABC transporter 315 464 1.1E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS05590 d9a246077501cac8c92f3a5807ab5779 554 SUPERFAMILY SSF90123 2 265 1.83E-38 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS05590 d9a246077501cac8c92f3a5807ab5779 554 Pfam PF00664 ABC transporter transmembrane region 4 251 1.3E-23 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS05590 d9a246077501cac8c92f3a5807ab5779 554 Gene3D G3DSA:1.20.1560.10 2 268 2.3E-32 T 23-04-2016 RBRH_RS05590 d9a246077501cac8c92f3a5807ab5779 554 PANTHER PTHR24221 1 517 4.0E-131 T 23-04-2016 RBRH_RS05590 d9a246077501cac8c92f3a5807ab5779 554 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 SUPERFAMILY SSF53955 64 280 1.04E-78 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 SUPERFAMILY SSF56601 233 255 2.63E-117 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 SUPERFAMILY SSF56601 284 335 2.63E-117 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 SUPERFAMILY SSF56601 439 742 2.63E-117 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 Gene3D G3DSA:2.40.50.140 369 438 2.8E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 PANTHER PTHR32282 438 742 8.8E-241 T 23-04-2016 RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 PANTHER PTHR32282 1 332 8.8E-241 T 23-04-2016 RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 Pfam PF00905 Penicillin binding protein transpeptidase domain 447 689 9.2E-36 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 Pfam PF00912 Transglycosylase 79 251 4.0E-66 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 PANTHER PTHR32282:SF5 438 742 8.8E-241 T 23-04-2016 RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 PANTHER PTHR32282:SF5 1 332 8.8E-241 T 23-04-2016 RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 Pfam PF17092 Penicillin-binding protein OB-like domain 338 442 1.6E-21 T 23-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 87 728 2.1E-189 T 23-04-2016 RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 Gene3D G3DSA:3.40.710.10 255 335 7.0E-128 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 Gene3D G3DSA:3.40.710.10 439 743 7.0E-128 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS04585 d0f4de45f00e7c52024ca255ed627120 802 Gene3D G3DSA:1.10.3810.10 78 254 5.1E-76 T 23-04-2016 RBRH_RS08745 781cae90191f4f862acca4ffabb47a5c 238 Pfam PF05036 Sporulation related domain 159 228 6.8E-12 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RBRH_RS08745 781cae90191f4f862acca4ffabb47a5c 238 SUPERFAMILY SSF110997 158 229 2.09E-11 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RBRH_RS08745 781cae90191f4f862acca4ffabb47a5c 238 Gene3D G3DSA:3.30.70.1070 156 229 3.2E-11 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RBRH_RS05025 6fe6db894392fc80241d51ac9449320b 247 SUPERFAMILY SSF54423 47 94 8.83E-9 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RBRH_RS05025 6fe6db894392fc80241d51ac9449320b 247 PANTHER PTHR35272 8 243 1.2E-32 T 23-04-2016 RBRH_RS05025 6fe6db894392fc80241d51ac9449320b 247 Gene3D G3DSA:3.40.30.10 117 244 7.9E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS05025 6fe6db894392fc80241d51ac9449320b 247 Pfam PF13098 Thioredoxin-like domain 120 243 1.6E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS05025 6fe6db894392fc80241d51ac9449320b 247 Gene3D G3DSA:3.10.450.70 38 96 7.4E-13 T 23-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RBRH_RS05025 6fe6db894392fc80241d51ac9449320b 247 Pfam PF10411 Disulfide bond isomerase protein N-terminus 38 92 6.2E-15 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RBRH_RS05025 6fe6db894392fc80241d51ac9449320b 247 SUPERFAMILY SSF52833 92 243 2.0E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS06085 1fd349e1d6d57ced4f2fb423f1eaadf4 85 SUPERFAMILY SSF54285 1 83 2.06E-20 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RBRH_RS06085 1fd349e1d6d57ced4f2fb423f1eaadf4 85 Gene3D G3DSA:3.10.20.30 1 85 2.9E-24 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS06085 1fd349e1d6d57ced4f2fb423f1eaadf4 85 PANTHER PTHR33359 1 85 3.6E-19 T 23-04-2016 RBRH_RS06085 1fd349e1d6d57ced4f2fb423f1eaadf4 85 Pfam PF02597 ThiS family 6 85 1.9E-15 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RBRH_RS06085 1fd349e1d6d57ced4f2fb423f1eaadf4 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 85 4.5E-22 T 23-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 RBRH_RS05650 934681f6dfd761b13763feecdd609a2e 137 Pfam PF01850 PIN domain 5 125 4.0E-13 T 23-04-2016 IPR002716 PIN domain RBRH_RS05650 934681f6dfd761b13763feecdd609a2e 137 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 131 11.068 T 23-04-2016 IPR022907 VapC family GO:0004540 RBRH_RS05650 934681f6dfd761b13763feecdd609a2e 137 SUPERFAMILY SSF88723 4 132 6.17E-33 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS05650 934681f6dfd761b13763feecdd609a2e 137 PANTHER PTHR33653 1 135 5.3E-30 T 23-04-2016 RBRH_RS05650 934681f6dfd761b13763feecdd609a2e 137 PANTHER PTHR33653:SF2 1 135 5.3E-30 T 23-04-2016 RBRH_RS05650 934681f6dfd761b13763feecdd609a2e 137 Gene3D G3DSA:3.40.50.1010 5 132 6.2E-31 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 Gene3D G3DSA:3.40.50.300 212 369 1.1E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 Pfam PF00271 Helicase conserved C-terminal domain 233 339 6.2E-27 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 Gene3D G3DSA:3.40.50.300 1 211 3.5E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 PANTHER PTHR24031 1 369 6.0E-190 T 23-04-2016 RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 Pfam PF00270 DEAD/DEAH box helicase 25 195 3.0E-51 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 SMART SM00487 20 222 1.3E-60 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 SUPERFAMILY SSF52540 75 359 1.74E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 526 51.632 T 23-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 PANTHER PTHR24031:SF0 1 369 6.0E-190 T 23-04-2016 RBRH_RS10370 77aff9cf3c4bae4ab96e02b03943639e 549 SMART SM00490 258 339 3.9E-33 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS16185 48a16297c2e875b4a2a88b60694c8322 631 PANTHER PTHR15749:SF3 424 630 1.2E-137 T 23-04-2016 RBRH_RS16185 48a16297c2e875b4a2a88b60694c8322 631 PANTHER PTHR15749:SF3 10 361 1.2E-137 T 23-04-2016 RBRH_RS16185 48a16297c2e875b4a2a88b60694c8322 631 PANTHER PTHR15749 424 630 1.2E-137 T 23-04-2016 IPR033315 Fanconi-associated nuclease 1-like GO:0004518|GO:0036297 RBRH_RS16185 48a16297c2e875b4a2a88b60694c8322 631 Pfam PF08774 VRR-NUC domain 519 630 6.2E-26 T 23-04-2016 IPR014883 VRR-NUC domain GO:0016788 RBRH_RS16185 48a16297c2e875b4a2a88b60694c8322 631 PANTHER PTHR15749 10 361 1.2E-137 T 23-04-2016 IPR033315 Fanconi-associated nuclease 1-like GO:0004518|GO:0036297 RBRH_RS16185 48a16297c2e875b4a2a88b60694c8322 631 Gene3D G3DSA:1.25.40.10 215 312 1.3E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS16185 48a16297c2e875b4a2a88b60694c8322 631 SMART SM00990 516 630 6.9E-38 T 23-04-2016 IPR014883 VRR-NUC domain GO:0016788 RBRH_RS05670 7d322673bb53eb1f08dd3bc200d97247 57 Gene3D G3DSA:1.10.260.40 2 45 3.0E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS05670 7d322673bb53eb1f08dd3bc200d97247 57 SUPERFAMILY SSF47413 3 53 2.39E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS05670 7d322673bb53eb1f08dd3bc200d97247 57 Pfam PF13744 Helix-turn-helix domain 4 53 1.4E-12 T 23-04-2016 RBRH_RS00280 ac188c5af7ab615eca036c03d2b339b5 383 Gene3D G3DSA:3.40.50.150 148 325 3.0E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS00280 ac188c5af7ab615eca036c03d2b339b5 383 PANTHER PTHR18895:SF64 208 321 6.2E-23 T 23-04-2016 RBRH_RS00280 ac188c5af7ab615eca036c03d2b339b5 383 SUPERFAMILY SSF53335 171 321 1.45E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS00280 ac188c5af7ab615eca036c03d2b339b5 383 Pfam PF05175 Methyltransferase small domain 177 319 1.5E-11 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RBRH_RS00280 ac188c5af7ab615eca036c03d2b339b5 383 PANTHER PTHR18895 208 321 6.2E-23 T 23-04-2016 RBRH_RS09430 ae1cea7aba3f521b78d748fc53fef247 404 Pfam PF01385 Probable transposase 172 277 7.1E-27 T 23-04-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 RBRH_RS09430 ae1cea7aba3f521b78d748fc53fef247 404 Pfam PF07282 Putative transposase DNA-binding domain 305 372 4.9E-21 T 23-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal RBRH_RS09430 ae1cea7aba3f521b78d748fc53fef247 404 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 245 332 1.6E-7 T 23-04-2016 IPR010095 Transposase IS605, OrfB, C-terminal RBRH_RS09430 ae1cea7aba3f521b78d748fc53fef247 404 PANTHER PTHR30405 1 281 8.5E-99 T 23-04-2016 RBRH_RS09430 ae1cea7aba3f521b78d748fc53fef247 404 PANTHER PTHR30405 297 388 8.5E-99 T 23-04-2016 RBRH_RS09430 ae1cea7aba3f521b78d748fc53fef247 404 PANTHER PTHR30405:SF5 1 281 8.5E-99 T 23-04-2016 RBRH_RS09430 ae1cea7aba3f521b78d748fc53fef247 404 PANTHER PTHR30405:SF5 297 388 8.5E-99 T 23-04-2016 RBRH_RS09430 ae1cea7aba3f521b78d748fc53fef247 404 Pfam PF12323 Helix-turn-helix domain 5 48 2.8E-16 T 23-04-2016 IPR021027 Transposase, putative, helix-turn-helix domain RBRH_RS11800 b8f07ef825d06980b8737a018e422dda 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 305 1.1E-18 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RBRH_RS11800 b8f07ef825d06980b8737a018e422dda 331 PANTHER PTHR24220:SF576 17 316 2.9E-159 T 23-04-2016 RBRH_RS11800 b8f07ef825d06980b8737a018e422dda 331 SMART SM00382 40 247 8.5E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS11800 b8f07ef825d06980b8737a018e422dda 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 319 1.6E-21 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RBRH_RS11800 b8f07ef825d06980b8737a018e422dda 331 PANTHER PTHR24220 17 316 2.9E-159 T 23-04-2016 RBRH_RS11800 b8f07ef825d06980b8737a018e422dda 331 SUPERFAMILY SSF52540 41 312 4.02E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11800 b8f07ef825d06980b8737a018e422dda 331 Pfam PF00005 ABC transporter 32 189 1.6E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS11800 b8f07ef825d06980b8737a018e422dda 331 Gene3D G3DSA:3.40.50.300 10 268 3.1E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10980 b51548fdedafce41cea7246a19822948 188 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 19 188 35.31 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RBRH_RS10980 b51548fdedafce41cea7246a19822948 188 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 20 186 1.2E-62 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RBRH_RS10980 b51548fdedafce41cea7246a19822948 188 SUPERFAMILY SSF53271 19 187 4.33E-48 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS10980 b51548fdedafce41cea7246a19822948 188 PANTHER PTHR32315 4 188 2.5E-74 T 23-04-2016 RBRH_RS10980 b51548fdedafce41cea7246a19822948 188 Pfam PF00156 Phosphoribosyl transferase domain 66 165 1.4E-13 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RBRH_RS10980 b51548fdedafce41cea7246a19822948 188 Gene3D G3DSA:3.40.50.2020 18 187 1.5E-62 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS00345 95bfeac4ebdc4d951fadf24833bac0b9 176 Gene3D G3DSA:3.30.1360.100 98 171 2.4E-8 T 23-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain RBRH_RS00345 95bfeac4ebdc4d951fadf24833bac0b9 176 SUPERFAMILY SSF103054 97 172 2.75E-13 T 23-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain RBRH_RS00345 95bfeac4ebdc4d951fadf24833bac0b9 176 Pfam PF04612 Type II secretion system (T2SS), protein M 18 172 8.2E-38 T 23-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 RBRH_RS08290 50e3e8467759743bc795c0bd958e776b 107 SUPERFAMILY SSF89360 1 96 1.57E-32 T 23-04-2016 IPR000361 FeS cluster biogenesis RBRH_RS08290 50e3e8467759743bc795c0bd958e776b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 9.6E-55 T 23-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 RBRH_RS08290 50e3e8467759743bc795c0bd958e776b 107 PANTHER PTHR10072:SF48 1 107 4.1E-50 T 23-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 RBRH_RS08290 50e3e8467759743bc795c0bd958e776b 107 PANTHER PTHR10072 1 107 4.1E-50 T 23-04-2016 RBRH_RS08290 50e3e8467759743bc795c0bd958e776b 107 Gene3D G3DSA:2.60.300.12 2 96 5.5E-35 T 23-04-2016 IPR000361 FeS cluster biogenesis RBRH_RS08290 50e3e8467759743bc795c0bd958e776b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.1E-36 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RBRH_RS08290 50e3e8467759743bc795c0bd958e776b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RBRH_RS08290 50e3e8467759743bc795c0bd958e776b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 5.2E-25 T 23-04-2016 IPR000361 FeS cluster biogenesis RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 PANTHER PTHR33705:SF2 1 89 4.3E-40 T 23-04-2016 RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 8.1E-33 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 Gene3D G3DSA:3.30.1340.10 1 87 1.1E-31 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.4E-17 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.4E-17 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.4E-17 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 PANTHER PTHR33705 1 89 4.3E-40 T 23-04-2016 RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.4E-27 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 23-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 23-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RBRH_RS11290 5b85e533393841cfe6a475c3307d2b66 89 SUPERFAMILY SSF55594 1 87 2.75E-30 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 25 190 3.0E-58 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 Gene3D G3DSA:3.40.50.970 376 577 6.1E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 412 560 5.4E-52 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 PANTHER PTHR18968:SF116 3 584 0.0 T 23-04-2016 RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 213 349 3.2E-44 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 PANTHER PTHR18968 3 584 0.0 T 23-04-2016 RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 25 583 4.9E-257 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 SUPERFAMILY SSF52518 25 200 7.7E-63 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 Gene3D G3DSA:3.40.50.1220 207 375 1.7E-65 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 SUPERFAMILY SSF52467 206 380 1.44E-63 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 SUPERFAMILY SSF52518 390 584 1.12E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS09150 2409346c9ad530f38963cb3482066860 589 Gene3D G3DSA:3.40.50.970 25 197 4.4E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 Pfam PF02867 Ribonucleotide reductase, barrel domain 371 910 6.4E-181 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 294 367 3.0E-22 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 754 776 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 PRINTS PR01183 Ribonucleotide reductase large chain signature 581 592 1.5E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 PRINTS PR01183 Ribonucleotide reductase large chain signature 689 712 1.5E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 PRINTS PR01183 Ribonucleotide reductase large chain signature 446 465 1.5E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 PRINTS PR01183 Ribonucleotide reductase large chain signature 661 683 1.5E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 PRINTS PR01183 Ribonucleotide reductase large chain signature 623 646 1.5E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 PRINTS PR01183 Ribonucleotide reductase large chain signature 765 792 1.5E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 PANTHER PTHR11573 155 924 0.0 T 23-04-2016 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 SUPERFAMILY SSF48168 158 369 4.97E-63 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 297 913 2.7E-211 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 Pfam PF03477 ATP cone domain 41 137 2.5E-18 T 23-04-2016 IPR005144 ATP-cone domain RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 SUPERFAMILY SSF51998 370 814 7.94E-180 T 23-04-2016 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 SUPERFAMILY SSF51998 845 913 7.94E-180 T 23-04-2016 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 Gene3D G3DSA:3.20.70.20 765 810 4.9E-85 T 23-04-2016 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 Gene3D G3DSA:3.20.70.20 871 912 4.9E-85 T 23-04-2016 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 Gene3D G3DSA:3.20.70.20 547 709 4.9E-85 T 23-04-2016 RBRH_RS01470 ac1b655a744b60438fda50050f8e4f68 992 Gene3D G3DSA:3.20.70.20 285 492 4.9E-85 T 23-04-2016 RBRH_RS03275 92fb94870726ef86502b3772aa7dc753 132 PANTHER PTHR40261:SF2 29 105 1.0E-22 T 23-04-2016 RBRH_RS03275 92fb94870726ef86502b3772aa7dc753 132 Pfam PF00355 Rieske [2Fe-2S] domain 5 92 8.4E-7 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RBRH_RS03275 92fb94870726ef86502b3772aa7dc753 132 Gene3D G3DSA:2.102.10.10 1 105 6.9E-14 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RBRH_RS03275 92fb94870726ef86502b3772aa7dc753 132 SUPERFAMILY SSF50022 2 115 2.49E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RBRH_RS03275 92fb94870726ef86502b3772aa7dc753 132 PANTHER PTHR40261 29 105 1.0E-22 T 23-04-2016 RBRH_RS07720 c1341374e4977abaff4bdc7173209134 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 211 4.9E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS07720 c1341374e4977abaff4bdc7173209134 219 PANTHER PTHR30614:SF18 4 219 4.7E-91 T 23-04-2016 RBRH_RS07720 c1341374e4977abaff4bdc7173209134 219 PANTHER PTHR30614 4 219 4.7E-91 T 23-04-2016 RBRH_RS07720 c1341374e4977abaff4bdc7173209134 219 Gene3D G3DSA:1.10.3720.10 11 213 1.3E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS07720 c1341374e4977abaff4bdc7173209134 219 SUPERFAMILY SSF161098 12 210 3.27E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS07720 c1341374e4977abaff4bdc7173209134 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 9.7E-30 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RBRH_RS05895 ee1b092cc44aac3c07e4e123980c83b5 301 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 60 300 1.0E-46 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RBRH_RS05895 ee1b092cc44aac3c07e4e123980c83b5 301 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 36 299 1.3E-68 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RBRH_RS05895 ee1b092cc44aac3c07e4e123980c83b5 301 PANTHER PTHR30616:SF3 21 218 3.9E-81 T 23-04-2016 RBRH_RS05895 ee1b092cc44aac3c07e4e123980c83b5 301 PANTHER PTHR30616:SF3 236 301 3.9E-81 T 23-04-2016 RBRH_RS05895 ee1b092cc44aac3c07e4e123980c83b5 301 Gene3D G3DSA:3.60.140.10 18 300 4.4E-87 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RBRH_RS05895 ee1b092cc44aac3c07e4e123980c83b5 301 PANTHER PTHR30616 21 218 3.9E-81 T 23-04-2016 RBRH_RS05895 ee1b092cc44aac3c07e4e123980c83b5 301 PANTHER PTHR30616 236 301 3.9E-81 T 23-04-2016 RBRH_RS05895 ee1b092cc44aac3c07e4e123980c83b5 301 SUPERFAMILY SSF64438 16 300 4.03E-70 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic RBRH_RS08795 e404f073f0afbbff8d82022d217515b2 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RBRH_RS08795 e404f073f0afbbff8d82022d217515b2 357 PANTHER PTHR11835 1 357 4.1E-193 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RBRH_RS08795 e404f073f0afbbff8d82022d217515b2 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 350 6.9E-147 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 RBRH_RS08795 e404f073f0afbbff8d82022d217515b2 357 Gene3D G3DSA:3.40.718.10 2 355 4.6E-127 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RBRH_RS08795 e404f073f0afbbff8d82022d217515b2 357 PANTHER PTHR11835:SF35 1 357 4.1E-193 T 23-04-2016 RBRH_RS08795 e404f073f0afbbff8d82022d217515b2 357 SMART SM01329 2 351 7.5E-201 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RBRH_RS08795 e404f073f0afbbff8d82022d217515b2 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 355 50.787 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 RBRH_RS08795 e404f073f0afbbff8d82022d217515b2 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 351 6.9E-130 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RBRH_RS08795 e404f073f0afbbff8d82022d217515b2 357 SUPERFAMILY SSF53659 2 355 4.68E-120 T 23-04-2016 RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 SUPERFAMILY SSF48019 240 422 7.37E-72 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 SMART SM00382 44 160 3.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 Gene3D G3DSA:1.10.3710.10 337 433 2.6E-32 T 23-04-2016 RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 PANTHER PTHR13779:SF7 10 428 1.4E-178 T 23-04-2016 RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 Gene3D G3DSA:3.40.50.300 7 148 3.2E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 PANTHER PTHR13779 10 428 1.4E-178 T 23-04-2016 RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 12 127 4.9E-13 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 Pfam PF16193 AAA C-terminal domain 180 255 2.9E-20 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 SUPERFAMILY SSF52540 7 224 3.27E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 Gene3D G3DSA:1.10.8.60 149 212 5.7E-6 T 23-04-2016 RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 Pfam PF12002 MgsA AAA+ ATPase C terminal 256 422 1.1E-64 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 Gene3D G3DSA:1.20.272.10 239 335 8.6E-43 T 23-04-2016 RBRH_RS02670 738ca709cf9522ce6c84cbc31394a23a 438 Gene3D G3DSA:3.40.50.300 213 238 7.1E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 SUPERFAMILY SSF51735 184 331 8.9E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 435 29.463 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 PIRSF PIRSF000445 39 443 5.8E-140 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 58 429 3.6E-118 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 341 434 3.7E-26 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 PANTHER PTHR21089 55 277 2.1E-110 T 23-04-2016 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 PANTHER PTHR21089 293 380 2.1E-110 T 23-04-2016 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 SUPERFAMILY SSF69075 338 437 3.14E-28 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 Gene3D G3DSA:3.40.50.720 203 378 3.1E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 SUPERFAMILY SSF69742 1 179 1.7E-42 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 193 326 2.0E-45 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 120 143 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 PANTHER PTHR21089:SF3 55 277 2.1E-110 T 23-04-2016 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 PANTHER PTHR21089:SF3 293 380 2.1E-110 T 23-04-2016 RBRH_RS04980 8f0dd19dea27bc171aebaecf0b9d6c3f 444 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 177 2.5E-45 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 Gene3D G3DSA:3.30.300.10 12 135 1.9E-45 T 23-04-2016 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 SUPERFAMILY SSF55973 236 386 3.88E-69 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 PANTHER PTHR11964 2 381 2.5E-265 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 56.953 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 4.3E-182 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 102 5.7E-40 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 SUPERFAMILY SSF55973 4 110 2.12E-45 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 PIRSF PIRSF000497 1 387 4.3E-172 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 374 1.7E-68 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 SUPERFAMILY SSF55973 113 235 1.18E-52 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 Gene3D G3DSA:3.30.300.10 247 386 4.6E-69 T 23-04-2016 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 7.4E-46 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 Gene3D G3DSA:3.30.300.10 136 236 2.5E-44 T 23-04-2016 RBRH_RS11885 b6099abc0f88548b0bbd929ee54c54d9 395 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR01900 YidC translocation/secretion protein signature 353 369 2.2E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR01900 YidC translocation/secretion protein signature 482 497 2.2E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR01900 YidC translocation/secretion protein signature 501 525 2.2E-25 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 Pfam PF14849 YidC periplasmic domain 84 357 5.2E-84 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 Pfam PF02096 60Kd inner membrane protein 368 546 3.8E-61 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 367 546 1.7E-71 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR00701 60kDa inner membrane protein signature 90 111 1.5E-70 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR00701 60kDa inner membrane protein signature 476 498 1.5E-70 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR00701 60kDa inner membrane protein signature 512 535 1.5E-70 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR00701 60kDa inner membrane protein signature 230 248 1.5E-70 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR00701 60kDa inner membrane protein signature 177 197 1.5E-70 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR00701 60kDa inner membrane protein signature 265 280 1.5E-70 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.5E-70 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR00701 60kDa inner membrane protein signature 338 358 1.5E-70 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PRINTS PR00701 60kDa inner membrane protein signature 429 452 1.5E-70 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 366 7.2E-110 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PANTHER PTHR12428:SF14 184 546 2.4E-100 T 23-04-2016 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 PANTHER PTHR12428 184 546 2.4E-100 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RBRH_RS12215 305024ebfd0574c8ebece72566b5cbda 554 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 548 24.413 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 RBRH_RS10675 64cd74b676ead358058960ad35a3ac95 153 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 148 7.3E-48 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RBRH_RS10675 64cd74b676ead358058960ad35a3ac95 153 SUPERFAMILY SSF69500 2 149 6.93E-50 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RBRH_RS10675 64cd74b676ead358058960ad35a3ac95 153 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 150 4.9E-53 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RBRH_RS10675 64cd74b676ead358058960ad35a3ac95 153 Gene3D G3DSA:3.50.80.10 3 148 1.5E-50 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RBRH_RS10675 64cd74b676ead358058960ad35a3ac95 153 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 150 32.483 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RBRH_RS10675 64cd74b676ead358058960ad35a3ac95 153 PANTHER PTHR10472 2 148 1.9E-63 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 SUPERFAMILY SSF89550 6 264 1.04E-10 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 Gene3D G3DSA:2.40.50.140 972 1068 5.4E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 PANTHER PTHR32294 2 1097 0.0 T 23-04-2016 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 PANTHER PTHR32294:SF0 2 1097 0.0 T 23-04-2016 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 Gene3D G3DSA:1.10.150.280 836 870 1.8E-4 T 23-04-2016 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 Gene3D G3DSA:3.20.20.140 6 257 2.7E-18 T 23-04-2016 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 293 730 1.7E-177 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1023 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 Pfam PF14579 Helix-hairpin-helix motif 804 898 7.8E-29 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 Pfam PF01336 OB-fold nucleic acid binding domain 989 1049 9.1E-7 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 Pfam PF02811 PHP domain 8 173 7.5E-42 T 23-04-2016 IPR004013 PHP domain GO:0003824 RBRH_RS09315 5e9ec83d286db98b0bb9232cca10e41d 1198 SMART SM00481 7 74 1.2E-22 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RBRH_RS00255 27ff108136594324e5da883fa7a0af13 191 PIRSF PIRSF016897 3 190 1.8E-54 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RBRH_RS00255 27ff108136594324e5da883fa7a0af13 191 PANTHER PTHR35787 4 191 3.6E-36 T 23-04-2016 RBRH_RS00255 27ff108136594324e5da883fa7a0af13 191 SUPERFAMILY SSF110391 13 186 4.45E-48 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RBRH_RS00255 27ff108136594324e5da883fa7a0af13 191 Gene3D G3DSA:3.20.20.400 4 187 2.3E-47 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RBRH_RS00255 27ff108136594324e5da883fa7a0af13 191 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 14 185 7.5E-49 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RBRH_RS11705 3b479448f5157696f4ec417bba31c278 388 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 292 3.1E-67 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RBRH_RS11705 3b479448f5157696f4ec417bba31c278 388 PANTHER PTHR11562 16 300 2.4E-81 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RBRH_RS11705 3b479448f5157696f4ec417bba31c278 388 Gene3D G3DSA:3.30.70.1350 211 293 5.4E-26 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RBRH_RS11705 3b479448f5157696f4ec417bba31c278 388 PANTHER PTHR11562:SF18 16 300 2.4E-81 T 23-04-2016 RBRH_RS11705 3b479448f5157696f4ec417bba31c278 388 SUPERFAMILY SSF161111 13 211 9.94E-51 T 23-04-2016 RBRH_RS11705 3b479448f5157696f4ec417bba31c278 388 SUPERFAMILY SSF160240 213 293 1.44E-21 T 23-04-2016 RBRH_RS11705 3b479448f5157696f4ec417bba31c278 388 Pfam PF01545 Cation efflux family 17 209 7.8E-47 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RBRH_RS11705 3b479448f5157696f4ec417bba31c278 388 Pfam PF16916 Dimerisation domain of Zinc Transporter 214 291 1.0E-22 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RBRH_RS11705 3b479448f5157696f4ec417bba31c278 388 Gene3D G3DSA:1.20.1510.10 13 209 9.1E-47 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain RBRH_RS06460 fe34535600f8302b895d9366a039c41c 260 SUPERFAMILY SSF64005 13 238 2.22E-85 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RBRH_RS06460 fe34535600f8302b895d9366a039c41c 260 Gene3D G3DSA:3.40.1180.10 13 249 1.5E-96 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RBRH_RS06460 fe34535600f8302b895d9366a039c41c 260 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 RBRH_RS06460 fe34535600f8302b895d9366a039c41c 260 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 243 40.493 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RBRH_RS06460 fe34535600f8302b895d9366a039c41c 260 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 242 2.9E-80 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RBRH_RS06460 fe34535600f8302b895d9366a039c41c 260 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 242 5.8E-89 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RBRH_RS06460 fe34535600f8302b895d9366a039c41c 260 PANTHER PTHR10291 16 255 3.6E-115 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RBRH_RS01540 c844356ea5343a2d6a265b02ef82ff80 204 Gene3D G3DSA:3.40.50.1820 2 190 2.5E-19 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS01540 c844356ea5343a2d6a265b02ef82ff80 204 PANTHER PTHR35602:SF3 1 198 1.7E-64 T 23-04-2016 RBRH_RS01540 c844356ea5343a2d6a265b02ef82ff80 204 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 193 9.1E-60 T 23-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RBRH_RS01540 c844356ea5343a2d6a265b02ef82ff80 204 PANTHER PTHR35602 1 198 1.7E-64 T 23-04-2016 RBRH_RS01540 c844356ea5343a2d6a265b02ef82ff80 204 SUPERFAMILY SSF53474 2 193 1.18E-18 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS16145 eb17ef7c193d934405a2858ddd414b01 231 SUPERFAMILY SSF82771 9 82 7.19E-5 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RBRH_RS01480 51be4f594160f3d14d67f2f52d036952 411 Gene3D G3DSA:1.10.620.20 75 386 6.8E-110 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RBRH_RS01480 51be4f594160f3d14d67f2f52d036952 411 PIRSF PIRSF000355 61 411 8.4E-132 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RBRH_RS01480 51be4f594160f3d14d67f2f52d036952 411 PANTHER PTHR23409:SF18 50 406 1.4E-152 T 23-04-2016 RBRH_RS01480 51be4f594160f3d14d67f2f52d036952 411 PANTHER PTHR23409 50 406 1.4E-152 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RBRH_RS01480 51be4f594160f3d14d67f2f52d036952 411 Pfam PF00268 Ribonucleotide reductase, small chain 91 378 1.2E-80 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RBRH_RS01480 51be4f594160f3d14d67f2f52d036952 411 SUPERFAMILY SSF47240 72 382 7.78E-97 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 96 349 9.9E-12 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 Gene3D G3DSA:3.40.50.1100 218 454 1.8E-90 T 23-04-2016 RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 SUPERFAMILY SSF53686 1 480 3.62E-151 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 TIGRFAM TIGR00260 thrC: threonine synthase 110 442 1.1E-67 T 23-04-2016 IPR004450 Threonine synthase-like RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 Pfam PF14821 Threonine synthase N terminus 2 81 2.2E-27 T 23-04-2016 IPR029144 Threonine synthase, N-terminal RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 Gene3D G3DSA:3.90.1380.10 1 84 2.7E-29 T 23-04-2016 IPR029144 Threonine synthase, N-terminal RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 PANTHER PTHR10314:SF1 55 348 1.9E-121 T 23-04-2016 RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 PANTHER PTHR10314:SF1 381 483 1.9E-121 T 23-04-2016 RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 PANTHER PTHR10314:SF1 27 38 1.9E-121 T 23-04-2016 RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 116 130 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 Gene3D G3DSA:3.40.50.1100 125 217 3.9E-7 T 23-04-2016 RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 PANTHER PTHR10314 55 348 1.9E-121 T 23-04-2016 RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 PANTHER PTHR10314 381 483 1.9E-121 T 23-04-2016 RBRH_RS06075 faa598ded68cdadbfa2243ee3781be06 483 PANTHER PTHR10314 27 38 1.9E-121 T 23-04-2016 RBRH_RS09905 825adc18cad8c2e099baa640fab5a2a4 284 Pfam PF13641 Glycosyltransferase like family 2 5 212 2.6E-18 T 23-04-2016 RBRH_RS09905 825adc18cad8c2e099baa640fab5a2a4 284 PANTHER PTHR22916:SF29 2 214 3.9E-28 T 23-04-2016 RBRH_RS09905 825adc18cad8c2e099baa640fab5a2a4 284 Gene3D G3DSA:3.90.550.10 6 239 1.2E-28 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS09905 825adc18cad8c2e099baa640fab5a2a4 284 PANTHER PTHR22916 2 214 3.9E-28 T 23-04-2016 RBRH_RS09905 825adc18cad8c2e099baa640fab5a2a4 284 SUPERFAMILY SSF53448 3 237 6.56E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS00970 dc5cd39e92a258fb247fd8e1a4172c70 64 Pfam PF11146 Protein of unknown function (DUF2905) 3 64 3.8E-16 T 23-04-2016 IPR021320 Protein of unknown function DUF2905 RBRH_RS09965 76bfb39a00206689b9daa703f5e796f6 288 SUPERFAMILY SSF56300 20 270 7.6E-53 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RBRH_RS09965 76bfb39a00206689b9daa703f5e796f6 288 PANTHER PTHR24032 22 275 5.8E-93 T 23-04-2016 RBRH_RS09965 76bfb39a00206689b9daa703f5e796f6 288 Gene3D G3DSA:3.60.21.10 22 145 5.8E-50 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RBRH_RS09965 76bfb39a00206689b9daa703f5e796f6 288 Gene3D G3DSA:3.60.21.10 182 284 5.8E-50 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RBRH_RS09965 76bfb39a00206689b9daa703f5e796f6 288 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 17 283 45.056 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RBRH_RS09965 76bfb39a00206689b9daa703f5e796f6 288 Pfam PF00149 Calcineurin-like phosphoesterase 22 162 5.3E-10 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RBRH_RS09965 76bfb39a00206689b9daa703f5e796f6 288 PIRSF PIRSF000903 18 288 1.5E-102 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RBRH_RS09965 76bfb39a00206689b9daa703f5e796f6 288 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 22 271 1.5E-74 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RBRH_RS09965 76bfb39a00206689b9daa703f5e796f6 288 PANTHER PTHR24032:SF27 22 275 5.8E-93 T 23-04-2016 RBRH_RS09215 fe5ae9e2c2a2e6837372244b47b0b588 450 SUPERFAMILY SSF81383 55 99 7.72E-7 T 23-04-2016 IPR001810 F-box domain GO:0005515 RBRH_RS09215 fe5ae9e2c2a2e6837372244b47b0b588 450 Gene3D G3DSA:3.80.10.10 57 96 5.2E-6 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RBRH_RS11925 a2c239b4212724c3553994a918051b47 178 PIRSF PIRSF039093 1 178 5.1E-84 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RBRH_RS11925 a2c239b4212724c3553994a918051b47 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 40.359 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RBRH_RS11925 a2c239b4212724c3553994a918051b47 178 PANTHER PTHR32194 1 178 2.1E-117 T 23-04-2016 RBRH_RS11925 a2c239b4212724c3553994a918051b47 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 7.7E-82 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RBRH_RS11925 a2c239b4212724c3553994a918051b47 178 Gene3D G3DSA:3.60.20.10 7 178 6.4E-82 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS11925 a2c239b4212724c3553994a918051b47 178 Pfam PF00227 Proteasome subunit 5 173 6.3E-22 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RBRH_RS11925 a2c239b4212724c3553994a918051b47 178 SUPERFAMILY SSF56235 3 177 2.85E-58 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 Pfam PF00815 Histidinol dehydrogenase 28 436 2.0E-166 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 9.1E-81 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 PRINTS PR00083 Histidinol dehydrogenase signature 179 205 9.1E-81 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 PRINTS PR00083 Histidinol dehydrogenase signature 260 279 9.1E-81 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 PRINTS PR00083 Histidinol dehydrogenase signature 370 388 9.1E-81 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 PRINTS PR00083 Histidinol dehydrogenase signature 329 354 9.1E-81 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 PRINTS PR00083 Histidinol dehydrogenase signature 145 171 9.1E-81 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 PRINTS PR00083 Histidinol dehydrogenase signature 209 234 9.1E-81 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 PRINTS PR00083 Histidinol dehydrogenase signature 238 259 9.1E-81 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 238 270 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 PIRSF PIRSF000099 3 438 1.8E-156 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 436 41.122 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 37 435 3.1E-158 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 SUPERFAMILY SSF53720 16 436 1.79E-80 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 Gene3D G3DSA:3.40.50.1980 30 248 3.0E-79 T 23-04-2016 RBRH_RS04755 3f4f670abee6d83fda4a096614529fb2 440 PANTHER PTHR21256 18 438 2.0E-196 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 605 1.6E-289 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 Gene3D G3DSA:3.30.420.40 119 197 7.1E-62 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 Gene3D G3DSA:3.30.420.40 4 52 7.1E-62 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 SUPERFAMILY SSF100920 385 540 2.88E-62 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 642 36.975 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 Pfam PF00012 Hsp70 protein 4 605 8.9E-262 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 Gene3D G3DSA:1.20.1270.10 533 605 8.6E-28 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 SUPERFAMILY SSF53067 4 184 5.47E-64 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 Gene3D G3DSA:3.30.30.30 53 108 8.5E-26 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 SUPERFAMILY SSF100934 508 605 1.44E-21 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PANTHER PTHR19375:SF173 2 645 0.0 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 SUPERFAMILY SSF53067 188 383 4.2E-68 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PANTHER PTHR19375 2 645 0.0 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 Gene3D G3DSA:3.90.640.10 231 316 1.1E-30 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 Gene3D G3DSA:2.60.34.10 391 532 1.3E-71 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 Gene3D G3DSA:3.30.420.40 320 362 3.7E-32 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 Gene3D G3DSA:3.30.420.40 198 230 3.7E-32 T 23-04-2016 RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PRINTS PR00301 70kDa heat shock protein signature 199 209 3.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PRINTS PR00301 70kDa heat shock protein signature 335 351 3.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PRINTS PR00301 70kDa heat shock protein signature 366 386 3.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PRINTS PR00301 70kDa heat shock protein signature 389 408 3.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PRINTS PR00301 70kDa heat shock protein signature 470 486 3.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS01880 c7fd764399c2c55df47ea36a01580ba0 645 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.3E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS02295 c07a3e47d1196ed912ebb89ad9a27022 306 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 39 302 1.1E-82 T 23-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 RBRH_RS02295 c07a3e47d1196ed912ebb89ad9a27022 306 Gene3D G3DSA:3.90.1170.20 33 157 3.4E-45 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RBRH_RS02295 c07a3e47d1196ed912ebb89ad9a27022 306 PIRSF PIRSF006250 29 305 1.8E-86 T 23-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RBRH_RS02295 c07a3e47d1196ed912ebb89ad9a27022 306 SUPERFAMILY SSF54675 28 136 1.41E-28 T 23-04-2016 RBRH_RS02295 c07a3e47d1196ed912ebb89ad9a27022 306 SUPERFAMILY SSF51690 137 302 9.03E-55 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RBRH_RS02295 c07a3e47d1196ed912ebb89ad9a27022 306 PANTHER PTHR32179 13 305 4.5E-107 T 23-04-2016 RBRH_RS02295 c07a3e47d1196ed912ebb89ad9a27022 306 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 48 135 3.2E-21 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RBRH_RS02295 c07a3e47d1196ed912ebb89ad9a27022 306 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 137 301 7.0E-53 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RBRH_RS02295 c07a3e47d1196ed912ebb89ad9a27022 306 Gene3D G3DSA:3.20.20.70 158 291 8.6E-53 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 Gene3D G3DSA:2.60.260.20 115 142 1.2E-20 T 23-04-2016 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 Gene3D G3DSA:2.60.260.20 212 255 1.2E-20 T 23-04-2016 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 SUPERFAMILY SSF49493 214 261 1.31E-19 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 SUPERFAMILY SSF49493 116 170 1.31E-19 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 Gene3D G3DSA:2.60.260.20 257 334 7.3E-24 T 23-04-2016 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 Pfam PF01556 DnaJ C terminal domain 122 334 7.1E-43 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 Pfam PF00226 DnaJ domain 5 67 1.9E-28 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 8.7E-139 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 SMART SM00271 4 62 1.8E-30 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 Pfam PF00684 DnaJ central domain 148 208 1.8E-14 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 PRINTS PR00625 DnaJ domain signature 7 25 1.9E-32 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 PRINTS PR00625 DnaJ domain signature 25 40 1.9E-32 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 PRINTS PR00625 DnaJ domain signature 62 81 1.9E-32 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 PRINTS PR00625 DnaJ domain signature 42 62 1.9E-32 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 41.846 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 Gene3D G3DSA:2.10.230.10 143 211 2.7E-23 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 SUPERFAMILY SSF57938 135 212 1.11E-21 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 Gene3D G3DSA:1.10.287.110 1 101 3.7E-37 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 PANTHER PTHR24078:SF190 1 348 1.4E-154 T 23-04-2016 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 SUPERFAMILY SSF46565 1 107 3.79E-36 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 SUPERFAMILY SSF49493 259 345 1.96E-23 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 PANTHER PTHR24078 1 348 1.4E-154 T 23-04-2016 RBRH_RS01885 1f394e4344e8fdf13d87e67d8839f20e 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-04-2016 IPR018253 DnaJ domain, conserved site RBRH_RS02740 93fb149ac4f20177aa797db7f09beae5 243 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 7 241 1.0E-116 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RBRH_RS02740 93fb149ac4f20177aa797db7f09beae5 243 Pfam PF01138 3' exoribonuclease family, domain 1 16 145 1.5E-21 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RBRH_RS02740 93fb149ac4f20177aa797db7f09beae5 243 Pfam PF03725 3' exoribonuclease family, domain 2 164 228 7.9E-10 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RBRH_RS02740 93fb149ac4f20177aa797db7f09beae5 243 PANTHER PTHR11953 7 242 1.9E-79 T 23-04-2016 RBRH_RS02740 93fb149ac4f20177aa797db7f09beae5 243 Gene3D G3DSA:3.30.230.70 20 242 3.4E-30 T 23-04-2016 IPR027408 PNPase/RNase PH domain RBRH_RS02740 93fb149ac4f20177aa797db7f09beae5 243 PANTHER PTHR11953:SF0 7 242 1.9E-79 T 23-04-2016 RBRH_RS02740 93fb149ac4f20177aa797db7f09beae5 243 SUPERFAMILY SSF54211 6 186 7.59E-43 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS02740 93fb149ac4f20177aa797db7f09beae5 243 Hamap MF_00564 Ribonuclease PH [rph]. 6 242 48.349 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RBRH_RS02740 93fb149ac4f20177aa797db7f09beae5 243 ProSitePatterns PS01277 Ribonuclease PH signature. 121 133 - T 23-04-2016 IPR018336 Ribonuclease PH, conserved site RBRH_RS02740 93fb149ac4f20177aa797db7f09beae5 243 SUPERFAMILY SSF55666 158 242 3.8E-26 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RBRH_RS10430 9e784f122c4f3c28c356f1239fb55074 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 117 127 - T 23-04-2016 IPR020549 Endoribonuclease YbeY, conserved site RBRH_RS10430 9e784f122c4f3c28c356f1239fb55074 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 10 151 22.505 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RBRH_RS10430 9e784f122c4f3c28c356f1239fb55074 157 Pfam PF02130 Uncharacterized protein family UPF0054 35 147 3.3E-34 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RBRH_RS10430 9e784f122c4f3c28c356f1239fb55074 157 PANTHER PTHR22881 29 156 4.9E-46 T 23-04-2016 RBRH_RS10430 9e784f122c4f3c28c356f1239fb55074 157 Gene3D G3DSA:3.40.390.30 31 156 1.1E-45 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 RBRH_RS10430 9e784f122c4f3c28c356f1239fb55074 157 SUPERFAMILY SSF55486 26 153 3.35E-43 T 23-04-2016 RBRH_RS10430 9e784f122c4f3c28c356f1239fb55074 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 45 148 2.1E-35 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RBRH_RS01245 d01f38aa2e10db75fba4a282ddef62da 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 140 1.9E-35 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RBRH_RS01245 d01f38aa2e10db75fba4a282ddef62da 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 50.571 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RBRH_RS01245 d01f38aa2e10db75fba4a282ddef62da 142 PANTHER PTHR34701 2 123 4.6E-43 T 23-04-2016 RBRH_RS01245 d01f38aa2e10db75fba4a282ddef62da 142 SUPERFAMILY SSF89447 2 129 3.92E-39 T 23-04-2016 RBRH_RS01245 d01f38aa2e10db75fba4a282ddef62da 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 127 1.1E-14 T 23-04-2016 IPR020603 MraZ domain RBRH_RS01245 d01f38aa2e10db75fba4a282ddef62da 142 Pfam PF02381 MraZ protein, putative antitoxin-like 2 67 2.8E-13 T 23-04-2016 IPR020603 MraZ domain RBRH_RS01245 d01f38aa2e10db75fba4a282ddef62da 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 1.0E-59 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 SUPERFAMILY SSF47323 396 612 1.81E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 PANTHER PTHR11946 11 655 6.6E-204 T 23-04-2016 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 Gene3D G3DSA:2.40.50.140 593 704 2.7E-41 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 Gene3D G3DSA:3.40.50.620 188 389 1.2E-83 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 Gene3D G3DSA:3.40.50.620 12 149 1.2E-83 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 SUPERFAMILY SSF52374 11 146 5.63E-94 T 23-04-2016 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 SUPERFAMILY SSF52374 181 397 5.63E-94 T 23-04-2016 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 Gene3D G3DSA:1.10.730.10 390 546 8.6E-37 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 Gene3D G3DSA:2.20.28.20 150 181 2.6E-17 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 PANTHER PTHR11946:SF86 11 655 6.6E-204 T 23-04-2016 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 13 523 8.5E-159 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 PRINTS PR01041 Methionyl-tRNA synthetase signature 300 315 1.5E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 1.5E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 272 1.5E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 PRINTS PR01041 Methionyl-tRNA synthetase signature 394 405 1.5E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 1.5E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 1.5E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 Pfam PF01588 Putative tRNA binding domain 604 701 7.8E-23 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 590 704 6.3E-39 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 SUPERFAMILY SSF50249 597 703 9.3E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 SUPERFAMILY SSF57770 147 181 8.89E-12 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 Pfam PF09334 tRNA synthetases class I (M) 13 406 2.7E-144 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 Pfam PF08264 Anticodon-binding domain of tRNA 427 511 1.5E-7 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RBRH_RS02560 6d47af4381332bf93453c227ba04e2aa 704 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 557 38.928 T 23-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RBRH_RS06420 e90a64b13565cee12f63e61575d09574 249 SUPERFAMILY SSF55174 1 74 3.27E-16 T 23-04-2016 RBRH_RS06420 e90a64b13565cee12f63e61575d09574 249 Pfam PF01479 S4 domain 1 43 6.5E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS06420 e90a64b13565cee12f63e61575d09574 249 PANTHER PTHR21600 1 247 3.0E-71 T 23-04-2016 RBRH_RS06420 e90a64b13565cee12f63e61575d09574 249 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 106 243 3.1E-34 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RBRH_RS06420 e90a64b13565cee12f63e61575d09574 249 Gene3D G3DSA:3.10.290.10 1 49 1.4E-17 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS06420 e90a64b13565cee12f63e61575d09574 249 SMART SM00363 1 60 2.4E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS06420 e90a64b13565cee12f63e61575d09574 249 Pfam PF00849 RNA pseudouridylate synthase 62 213 3.3E-13 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS06420 e90a64b13565cee12f63e61575d09574 249 SUPERFAMILY SSF55120 61 247 9.6E-33 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS06420 e90a64b13565cee12f63e61575d09574 249 PANTHER PTHR21600:SF25 1 247 3.0E-71 T 23-04-2016 RBRH_RS09885 136487296d2a93b998b456954b6e6cd6 273 Pfam PF13641 Glycosyltransferase like family 2 45 241 3.7E-8 T 23-04-2016 RBRH_RS09885 136487296d2a93b998b456954b6e6cd6 273 Gene3D G3DSA:3.90.550.10 1 268 1.2E-30 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS09885 136487296d2a93b998b456954b6e6cd6 273 PANTHER PTHR22916:SF16 7 153 1.5E-45 T 23-04-2016 RBRH_RS09885 136487296d2a93b998b456954b6e6cd6 273 PANTHER PTHR22916:SF16 179 271 1.5E-45 T 23-04-2016 RBRH_RS09885 136487296d2a93b998b456954b6e6cd6 273 SUPERFAMILY SSF53448 1 272 6.27E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS09885 136487296d2a93b998b456954b6e6cd6 273 PANTHER PTHR22916 7 153 1.5E-45 T 23-04-2016 RBRH_RS09885 136487296d2a93b998b456954b6e6cd6 273 PANTHER PTHR22916 179 271 1.5E-45 T 23-04-2016 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 30 1.0E-27 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 81 93 1.0E-27 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 318 324 1.0E-27 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 48 1.0E-27 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 7 19 1.0E-27 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 353 365 1.0E-27 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 Pfam PF01266 FAD dependent oxidoreductase 8 328 5.5E-47 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 387 483 1.8E-10 T 23-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 SUPERFAMILY SSF51905 5 304 2.02E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 Gene3D G3DSA:3.50.50.60 3 256 8.7E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 Gene3D G3DSA:3.50.50.60 291 311 8.7E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 12 29 - T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RBRH_RS10400 fc2d46082ea7fec2dcdcc7b170a2b9db 519 PANTHER PTHR11985 7 488 1.4E-171 T 23-04-2016 RBRH_RS07670 88768a44e3281ea777cc68ace4b76af9 165 SUPERFAMILY SSF55729 26 147 4.1E-13 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS07670 88768a44e3281ea777cc68ace4b76af9 165 Pfam PF13673 Acetyltransferase (GNAT) domain 44 147 1.3E-7 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RBRH_RS07670 88768a44e3281ea777cc68ace4b76af9 165 Gene3D G3DSA:3.40.630.30 18 160 1.6E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS07670 88768a44e3281ea777cc68ace4b76af9 165 PANTHER PTHR36449 1 161 1.9E-47 T 23-04-2016 RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 Gene3D G3DSA:2.30.38.10 444 522 7.0E-8 T 23-04-2016 RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 Gene3D G3DSA:3.30.300.30 530 638 2.9E-27 T 23-04-2016 RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 27 658 9.9E-295 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 660 51.691 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 Gene3D G3DSA:3.40.50.980 273 434 1.4E-29 T 23-04-2016 RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 Pfam PF00501 AMP-binding enzyme 93 535 1.8E-90 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 ProSitePatterns PS00455 Putative AMP-binding domain signature. 267 278 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 Gene3D G3DSA:3.40.50.980 87 272 3.6E-39 T 23-04-2016 RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 87 1.5E-21 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 625 5.3E-28 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 PANTHER PTHR24095 10 660 1.3E-266 T 23-04-2016 RBRH_RS07860 5c759b9656b4815219a1220c80cc83d6 660 SUPERFAMILY SSF56801 19 654 2.49E-171 T 23-04-2016 RBRH_RS08180 d6de92c46a3fcbb5573c760c94f96dd6 317 Pfam PF01430 Hsp33 protein 3 291 1.9E-83 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RBRH_RS08180 d6de92c46a3fcbb5573c760c94f96dd6 317 Gene3D G3DSA:3.55.30.10 2 186 4.0E-61 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RBRH_RS08180 d6de92c46a3fcbb5573c760c94f96dd6 317 PANTHER PTHR30111:SF1 3 306 1.0E-51 T 23-04-2016 RBRH_RS08180 d6de92c46a3fcbb5573c760c94f96dd6 317 PIRSF PIRSF005261 1 303 5.1E-69 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RBRH_RS08180 d6de92c46a3fcbb5573c760c94f96dd6 317 PANTHER PTHR30111 3 306 1.0E-51 T 23-04-2016 RBRH_RS08180 d6de92c46a3fcbb5573c760c94f96dd6 317 SUPERFAMILY SSF118352 243 300 4.45E-19 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RBRH_RS08180 d6de92c46a3fcbb5573c760c94f96dd6 317 Gene3D G3DSA:3.90.1280.10 244 300 3.6E-25 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RBRH_RS08180 d6de92c46a3fcbb5573c760c94f96dd6 317 Gene3D G3DSA:1.10.287.480 197 243 3.6E-10 T 23-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RBRH_RS08180 d6de92c46a3fcbb5573c760c94f96dd6 317 SUPERFAMILY SSF64397 3 250 2.22E-59 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RBRH_RS05110 a1a9a02f66e9c3edda6dc261fa15019e 559 PANTHER PTHR11699:SF165 85 521 1.5E-99 T 23-04-2016 RBRH_RS05110 a1a9a02f66e9c3edda6dc261fa15019e 559 SUPERFAMILY SSF53720 73 530 1.22E-56 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RBRH_RS05110 a1a9a02f66e9c3edda6dc261fa15019e 559 Pfam PF00171 Aldehyde dehydrogenase family 99 502 3.9E-34 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS05110 a1a9a02f66e9c3edda6dc261fa15019e 559 PANTHER PTHR11699 85 521 1.5E-99 T 23-04-2016 RBRH_RS05110 a1a9a02f66e9c3edda6dc261fa15019e 559 Gene3D G3DSA:3.40.605.10 85 302 2.6E-27 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS05110 a1a9a02f66e9c3edda6dc261fa15019e 559 TIGRFAM TIGR02288 PaaN_2: phenylacetic acid degradation protein paaN 3 555 3.4E-268 T 23-04-2016 IPR011975 Phenylacetic acid degradation protein PaaN2 RBRH_RS05110 a1a9a02f66e9c3edda6dc261fa15019e 559 Gene3D G3DSA:3.40.309.10 311 516 2.1E-31 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RBRH_RS11840 c1797c0c6e3fe50b2c0b84909462c5e4 141 PANTHER PTHR33931:SF3 6 137 3.6E-36 T 23-04-2016 RBRH_RS11840 c1797c0c6e3fe50b2c0b84909462c5e4 141 Pfam PF03788 LrgA family 29 120 1.5E-24 T 23-04-2016 IPR005538 LrgA/CidA family GO:0016021 RBRH_RS11840 c1797c0c6e3fe50b2c0b84909462c5e4 141 PANTHER PTHR33931 6 137 3.6E-36 T 23-04-2016 RBRH_RS00550 e46b90cbed2d57d7a5ed776e53356560 141 Gene3D G3DSA:1.20.5.440 90 132 6.5E-13 T 23-04-2016 RBRH_RS00550 e46b90cbed2d57d7a5ed776e53356560 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 1.8E-29 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00550 e46b90cbed2d57d7a5ed776e53356560 141 SUPERFAMILY SSF51344 3 85 8.37E-25 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00550 e46b90cbed2d57d7a5ed776e53356560 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 8.0E-35 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00550 e46b90cbed2d57d7a5ed776e53356560 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 6.8E-42 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00550 e46b90cbed2d57d7a5ed776e53356560 141 Gene3D G3DSA:2.60.15.10 1 88 2.7E-30 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00550 e46b90cbed2d57d7a5ed776e53356560 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.567 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00550 e46b90cbed2d57d7a5ed776e53356560 141 PANTHER PTHR13822 1 141 6.6E-42 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RBRH_RS00550 e46b90cbed2d57d7a5ed776e53356560 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 9.7E-9 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RBRH_RS00550 e46b90cbed2d57d7a5ed776e53356560 141 SUPERFAMILY SSF46604 88 135 5.23E-11 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 SUPERFAMILY SSF141259 482 559 6.41E-23 T 23-04-2016 IPR003711 CarD-like/TRCF domain RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 SUPERFAMILY SSF52540 534 794 1.05E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 SMART SM00487 611 801 4.6E-31 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 SUPERFAMILY SSF52540 367 475 2.03E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 Pfam PF03461 TRCF domain 1020 1112 1.2E-25 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 SMART SM00490 837 921 4.0E-15 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 Pfam PF02559 CarD-like/TRCF domain 491 586 6.0E-26 T 23-04-2016 IPR003711 CarD-like/TRCF domain RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 SMART SM00982 1019 1119 2.1E-45 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 SMART SM01058 490 587 4.8E-49 T 23-04-2016 IPR003711 CarD-like/TRCF domain RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 Gene3D G3DSA:3.40.50.300 807 967 8.8E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 PANTHER PTHR14025 394 1152 0.0 T 23-04-2016 RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 Gene3D G3DSA:3.40.50.300 604 797 7.5E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 Gene3D G3DSA:3.30.2060.10 145 219 2.2E-13 T 23-04-2016 RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 SUPERFAMILY SSF52540 23 354 1.08E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 163 1092 0.0 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 Pfam PF00271 Helicase conserved C-terminal domain 817 920 1.8E-16 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 PANTHER PTHR14025:SF21 394 1152 0.0 T 23-04-2016 RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 SUPERFAMILY SSF52540 794 1001 1.7E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 Pfam PF00270 DEAD/DEAH box helicase 616 773 6.6E-17 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 40 1121 28.097 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RBRH_RS07210 88a6b9c1461de7a1d0a1d06d15771f06 1165 SUPERFAMILY SSF143517 1005 1155 1.96E-39 T 23-04-2016 RBRH_RS10475 76af150b1b2986aeba44cc2c2e60a270 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.6E-24 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RBRH_RS10475 76af150b1b2986aeba44cc2c2e60a270 129 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 2.9E-65 T 23-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RBRH_RS10475 76af150b1b2986aeba44cc2c2e60a270 129 Gene3D G3DSA:3.10.180.10 1 126 2.1E-48 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RBRH_RS10475 76af150b1b2986aeba44cc2c2e60a270 129 PANTHER PTHR10374 1 125 3.5E-62 T 23-04-2016 RBRH_RS10475 76af150b1b2986aeba44cc2c2e60a270 129 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RBRH_RS10475 76af150b1b2986aeba44cc2c2e60a270 129 SUPERFAMILY SSF54593 1 126 3.62E-38 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RBRH_RS12140 6a24bb284a9d8932b18885cb39b6de9f 620 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 275 283 - T 23-04-2016 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS12140 6a24bb284a9d8932b18885cb39b6de9f 620 SUPERFAMILY SSF53795 251 618 2.98E-156 T 23-04-2016 RBRH_RS12140 6a24bb284a9d8932b18885cb39b6de9f 620 PANTHER PTHR11561 24 620 0.0 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS12140 6a24bb284a9d8932b18885cb39b6de9f 620 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 16 619 51.27 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS12140 6a24bb284a9d8932b18885cb39b6de9f 620 PIRSF PIRSF001348 11 620 1.1E-282 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS12140 6a24bb284a9d8932b18885cb39b6de9f 620 Pfam PF00821 Phosphoenolpyruvate carboxykinase 27 618 1.6E-284 T 23-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS12140 6a24bb284a9d8932b18885cb39b6de9f 620 SUPERFAMILY SSF68923 16 250 5.23E-103 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS12140 6a24bb284a9d8932b18885cb39b6de9f 620 Gene3D G3DSA:3.90.228.20 345 618 9.8E-97 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS12140 6a24bb284a9d8932b18885cb39b6de9f 620 Gene3D G3DSA:3.90.228.20 251 322 3.9E-31 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS12140 6a24bb284a9d8932b18885cb39b6de9f 620 Gene3D G3DSA:3.40.449.10 19 250 5.7E-101 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS02700 81998d10ae4f3b1882f1575b07e7bb7f 84 PANTHER PTHR33404 1 84 6.7E-19 T 23-04-2016 RBRH_RS02700 81998d10ae4f3b1882f1575b07e7bb7f 84 Gene3D G3DSA:3.30.1070.10 34 83 7.5E-20 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RBRH_RS02700 81998d10ae4f3b1882f1575b07e7bb7f 84 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 7.1E-25 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RBRH_RS02700 81998d10ae4f3b1882f1575b07e7bb7f 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 18.515 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RBRH_RS02700 81998d10ae4f3b1882f1575b07e7bb7f 84 SUPERFAMILY SSF55229 35 83 2.62E-14 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RBRH_RS02700 81998d10ae4f3b1882f1575b07e7bb7f 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 1.3E-28 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 PANTHER PTHR30108:SF1 314 524 3.0E-232 T 23-04-2016 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 PANTHER PTHR30108:SF1 1 286 3.0E-232 T 23-04-2016 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 SUPERFAMILY SSF50475 314 358 4.32E-110 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 SUPERFAMILY SSF50475 3 286 4.32E-110 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 523 72.25 T 23-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 PANTHER PTHR30108 314 524 3.0E-232 T 23-04-2016 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 PANTHER PTHR30108 1 286 3.0E-232 T 23-04-2016 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 SUPERFAMILY SSF143968 359 523 1.57E-67 T 23-04-2016 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 Gene3D G3DSA:1.20.5.570 491 523 2.1E-17 T 23-04-2016 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 314 491 1.4E-74 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 286 5.2E-76 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 12 467 2.6E-160 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RBRH_RS09745 264a3dc2b0eca33b06128301064d0f63 524 Gene3D G3DSA:3.40.1670.10 373 490 1.1E-53 T 23-04-2016 RBRH_RS08480 b7489fb845b390150525d6c93b7f1ef7 232 SUPERFAMILY SSF51261 37 229 1.31E-47 T 23-04-2016 IPR011055 Duplicated hybrid motif RBRH_RS08480 b7489fb845b390150525d6c93b7f1ef7 232 PANTHER PTHR21666 92 232 3.8E-43 T 23-04-2016 RBRH_RS08480 b7489fb845b390150525d6c93b7f1ef7 232 Gene3D G3DSA:3.10.350.10 35 80 9.8E-18 T 23-04-2016 IPR018392 LysM domain RBRH_RS08480 b7489fb845b390150525d6c93b7f1ef7 232 Pfam PF01476 LysM domain 37 79 3.7E-12 T 23-04-2016 IPR018392 LysM domain RBRH_RS08480 b7489fb845b390150525d6c93b7f1ef7 232 SMART SM00257 36 80 8.6E-14 T 23-04-2016 IPR018392 LysM domain RBRH_RS08480 b7489fb845b390150525d6c93b7f1ef7 232 Pfam PF01551 Peptidase family M23 132 225 1.3E-30 T 23-04-2016 IPR016047 Peptidase M23 RBRH_RS08480 b7489fb845b390150525d6c93b7f1ef7 232 Gene3D G3DSA:2.70.70.10 96 230 5.1E-38 T 23-04-2016 RBRH_RS08480 b7489fb845b390150525d6c93b7f1ef7 232 PANTHER PTHR21666:SF222 92 232 3.8E-43 T 23-04-2016 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 465 38.443 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 Gene3D G3DSA:3.40.50.620 22 310 1.9E-105 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 SUPERFAMILY SSF52374 4 317 8.31E-94 T 23-04-2016 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 317 1.2E-128 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 PANTHER PTHR10890 3 466 1.6E-227 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 465 1.1E-166 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 3.1E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 3.1E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 3.1E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 3.1E-29 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 Pfam PF09190 DALR domain 347 402 3.5E-15 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 Gene3D G3DSA:1.20.120.640 312 392 2.4E-21 T 23-04-2016 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 SUPERFAMILY SSF47323 321 464 3.79E-32 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS07995 187c5488658a3f5d751dd712c82e2f1e 466 SMART SM00840 347 402 1.4E-21 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RBRH_RS01835 9da3f6640465b68068788e75cf954b96 1442 PANTHER PTHR38690 454 1440 1.7E-84 T 23-04-2016 RBRH_RS01835 9da3f6640465b68068788e75cf954b96 1442 PANTHER PTHR38690 22 438 1.7E-84 T 23-04-2016 RBRH_RS01835 9da3f6640465b68068788e75cf954b96 1442 Pfam PF13116 Protein of unknown function 597 890 7.0E-41 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 RBRH_RS01835 9da3f6640465b68068788e75cf954b96 1442 Pfam PF13502 AsmA-like C-terminal region 1162 1421 2.7E-61 T 23-04-2016 IPR032712 AsmA-like, C-terminal RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.5E-18 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 SUPERFAMILY SSF52540 42 361 6.16E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 273 286 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 SMART SM00382 103 305 1.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 PANTHER PTHR11564 1 439 7.2E-242 T 23-04-2016 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 SMART SM00962 104 300 3.6E-115 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 Pfam PF02978 Signal peptide binding domain 333 432 4.3E-32 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 Pfam PF00448 SRP54-type protein, GTPase domain 104 300 1.5E-71 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 434 3.5E-173 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 Gene3D G3DSA:1.10.260.30 333 436 6.9E-38 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 Gene3D G3DSA:1.20.120.140 2 88 1.9E-31 T 23-04-2016 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 451 33.13 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 Gene3D G3DSA:3.40.50.300 98 301 1.3E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 SMART SM00963 1 86 3.0E-29 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 PANTHER PTHR11564:SF7 1 439 7.2E-242 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RBRH_RS01450 05b50ab39735be54c0862ef79d43aca2 455 SUPERFAMILY SSF47446 333 433 3.43E-34 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RBRH_RS04900 47c2fe561a4e3594cce8edc4c3c576cd 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RBRH_RS04900 47c2fe561a4e3594cce8edc4c3c576cd 490 Gene3D G3DSA:3.40.605.10 20 275 6.5E-103 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS04900 47c2fe561a4e3594cce8edc4c3c576cd 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RBRH_RS04900 47c2fe561a4e3594cce8edc4c3c576cd 490 PANTHER PTHR11699:SF49 1 487 1.4E-300 T 23-04-2016 RBRH_RS04900 47c2fe561a4e3594cce8edc4c3c576cd 490 SUPERFAMILY SSF53720 19 488 1.23E-174 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RBRH_RS04900 47c2fe561a4e3594cce8edc4c3c576cd 490 Pfam PF00171 Aldehyde dehydrogenase family 26 483 1.9E-174 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS04900 47c2fe561a4e3594cce8edc4c3c576cd 490 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 37 483 5.4E-223 T 23-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 RBRH_RS04900 47c2fe561a4e3594cce8edc4c3c576cd 490 PANTHER PTHR11699 1 487 1.4E-300 T 23-04-2016 RBRH_RS04900 47c2fe561a4e3594cce8edc4c3c576cd 490 Gene3D G3DSA:3.40.309.10 276 451 2.6E-71 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RBRH_RS02660 c17fc57c0dfa918096663b9b0c50ab94 771 Pfam PF01580 FtsK/SpoIIIE family 387 596 3.3E-64 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RBRH_RS02660 c17fc57c0dfa918096663b9b0c50ab94 771 Pfam PF09397 Ftsk gamma domain 704 764 1.3E-25 T 23-04-2016 IPR018541 FtsK gamma domain RBRH_RS02660 c17fc57c0dfa918096663b9b0c50ab94 771 PANTHER PTHR22683:SF41 209 767 2.0E-263 T 23-04-2016 RBRH_RS02660 c17fc57c0dfa918096663b9b0c50ab94 771 SMART SM00843 702 767 3.4E-35 T 23-04-2016 IPR018541 FtsK gamma domain RBRH_RS02660 c17fc57c0dfa918096663b9b0c50ab94 771 SUPERFAMILY SSF52540 361 667 1.01E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02660 c17fc57c0dfa918096663b9b0c50ab94 771 Gene3D G3DSA:3.40.50.300 360 663 6.5E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02660 c17fc57c0dfa918096663b9b0c50ab94 771 SUPERFAMILY SSF46785 702 765 1.91E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS02660 c17fc57c0dfa918096663b9b0c50ab94 771 PANTHER PTHR22683 209 767 2.0E-263 T 23-04-2016 RBRH_RS02660 c17fc57c0dfa918096663b9b0c50ab94 771 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 18 199 3.9E-52 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region RBRH_RS09330 a72135eed5853617d887abc89a707f14 467 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RBRH_RS09330 a72135eed5853617d887abc89a707f14 467 Gene3D G3DSA:3.40.50.300 2 215 9.0E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09330 a72135eed5853617d887abc89a707f14 467 Gene3D G3DSA:3.40.50.300 216 379 8.7E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09330 a72135eed5853617d887abc89a707f14 467 SMART SM00487 20 225 5.4E-63 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RBRH_RS09330 a72135eed5853617d887abc89a707f14 467 PANTHER PTHR24031:SF0 1 418 1.1E-179 T 23-04-2016 RBRH_RS09330 a72135eed5853617d887abc89a707f14 467 SUPERFAMILY SSF52540 77 362 1.48E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09330 a72135eed5853617d887abc89a707f14 467 PANTHER PTHR24031 1 418 1.1E-179 T 23-04-2016 RBRH_RS09330 a72135eed5853617d887abc89a707f14 467 SMART SM00490 261 342 4.8E-32 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS09330 a72135eed5853617d887abc89a707f14 467 Pfam PF00270 DEAD/DEAH box helicase 25 199 4.4E-53 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RBRH_RS09330 a72135eed5853617d887abc89a707f14 467 Pfam PF00271 Helicase conserved C-terminal domain 234 342 1.1E-27 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS04185 541e6c1a30f8a71925a533f4457cdec5 149 PANTHER PTHR28055 1 149 1.1E-53 T 23-04-2016 RBRH_RS04185 541e6c1a30f8a71925a533f4457cdec5 149 Gene3D G3DSA:1.10.1510.10 1 90 6.4E-34 T 23-04-2016 RBRH_RS04185 541e6c1a30f8a71925a533f4457cdec5 149 SUPERFAMILY SSF89095 1 146 3.71E-42 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RBRH_RS04185 541e6c1a30f8a71925a533f4457cdec5 149 Pfam PF09424 Yqey-like protein 4 146 2.3E-54 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial RBRH_RS04185 541e6c1a30f8a71925a533f4457cdec5 149 Gene3D G3DSA:1.10.10.410 91 147 2.7E-21 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RBRH_RS04185 541e6c1a30f8a71925a533f4457cdec5 149 PANTHER PTHR28055:SF1 1 149 1.1E-53 T 23-04-2016 RBRH_RS08420 f7f2f963a79f50be1b32c75378397b16 454 SUPERFAMILY SSF111369 105 343 4.58E-54 T 23-04-2016 RBRH_RS08420 f7f2f963a79f50be1b32c75378397b16 454 Pfam PF13533 Biotin-lipoyl like 116 164 3.6E-13 T 23-04-2016 RBRH_RS08420 f7f2f963a79f50be1b32c75378397b16 454 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 92 419 9.0E-71 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RBRH_RS08420 f7f2f963a79f50be1b32c75378397b16 454 PANTHER PTHR30469 86 430 7.4E-140 T 23-04-2016 RBRH_RS08420 f7f2f963a79f50be1b32c75378397b16 454 Gene3D G3DSA:2.40.50.100 116 149 2.0E-22 T 23-04-2016 RBRH_RS08420 f7f2f963a79f50be1b32c75378397b16 454 Gene3D G3DSA:2.40.50.100 224 258 2.0E-22 T 23-04-2016 RBRH_RS08420 f7f2f963a79f50be1b32c75378397b16 454 PANTHER PTHR30469:SF12 86 430 7.4E-140 T 23-04-2016 IPR022824 Multidrug resistance protein MdtA RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 Gene3D G3DSA:3.40.50.1380 1 187 1.1E-86 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 SMART SM00851 14 129 3.5E-62 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 521 1.1E-225 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 SUPERFAMILY SSF53927 215 521 3.61E-126 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 Pfam PF02142 MGS-like domain 14 129 2.0E-29 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 SMART SM00798 134 453 3.6E-210 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 452 9.2E-121 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 Gene3D G3DSA:3.40.140.20 247 361 3.8E-47 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 SUPERFAMILY SSF52335 2 193 5.36E-72 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 521 44.753 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 PANTHER PTHR11692:SF2 1 521 0.0 T 23-04-2016 RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 PIRSF PIRSF000414 1 521 3.7E-221 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 PANTHER PTHR11692 1 521 0.0 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RBRH_RS10655 bdf8f09c26e8f64996a9ba57e5b5f8fe 521 Gene3D G3DSA:3.40.140.20 369 511 2.3E-57 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RBRH_RS01430 d2d6108a36d948a9e06db71bba1948af 226 Gene3D G3DSA:3.90.79.10 7 152 4.0E-30 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS01430 d2d6108a36d948a9e06db71bba1948af 226 PRINTS PR00502 NUDIX hydrolase family signature 47 62 5.5E-6 T 23-04-2016 IPR020476 NUDIX hydrolase RBRH_RS01430 d2d6108a36d948a9e06db71bba1948af 226 PRINTS PR00502 NUDIX hydrolase family signature 33 47 5.5E-6 T 23-04-2016 IPR020476 NUDIX hydrolase RBRH_RS01430 d2d6108a36d948a9e06db71bba1948af 226 Pfam PF00293 NUDIX domain 7 136 9.5E-23 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RBRH_RS01430 d2d6108a36d948a9e06db71bba1948af 226 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RBRH_RS01430 d2d6108a36d948a9e06db71bba1948af 226 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.018 T 23-04-2016 IPR022927 RNA pyrophosphohydrolase RppH RBRH_RS01430 d2d6108a36d948a9e06db71bba1948af 226 SUPERFAMILY SSF55811 6 159 4.6E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS01430 d2d6108a36d948a9e06db71bba1948af 226 PANTHER PTHR23114 1 156 7.3E-40 T 23-04-2016 RBRH_RS01790 fd940cda4cbd63a2b87f2c50135f053e 234 SUPERFAMILY SSF51419 5 227 2.88E-80 T 23-04-2016 IPR029066 PLP-binding barrel RBRH_RS01790 fd940cda4cbd63a2b87f2c50135f053e 234 PANTHER PTHR10146 9 232 4.5E-100 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 RBRH_RS01790 fd940cda4cbd63a2b87f2c50135f053e 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 RBRH_RS01790 fd940cda4cbd63a2b87f2c50135f053e 234 Pfam PF01168 Alanine racemase, N-terminal domain 9 229 7.4E-32 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RBRH_RS01790 fd940cda4cbd63a2b87f2c50135f053e 234 PIRSF PIRSF004848 5 234 1.1E-72 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 RBRH_RS01790 fd940cda4cbd63a2b87f2c50135f053e 234 Gene3D G3DSA:3.20.20.10 5 232 3.2E-93 T 23-04-2016 IPR029066 PLP-binding barrel RBRH_RS01790 fd940cda4cbd63a2b87f2c50135f053e 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 8 229 3.2E-73 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 Gene3D G3DSA:3.40.710.10 319 568 1.7E-67 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 Gene3D G3DSA:3.40.710.10 126 163 4.8E-4 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 SUPERFAMILY SSF56601 106 568 1.3E-91 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 119 565 2.2E-83 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 PANTHER PTHR30023 69 571 1.1E-68 T 23-04-2016 RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 PANTHER PTHR30023:SF0 69 571 1.1E-68 T 23-04-2016 RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 464 478 4.8E-17 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 449 463 4.8E-17 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 148 167 4.8E-17 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 526 539 4.8E-17 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RBRH_RS10160 17a1d594cef0744532e49caa2db42fc6 571 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 138 549 1.7E-61 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RBRH_RS00440 494fb63b1e80a12cdd1057b037ae811b 184 SUPERFAMILY SSF82199 5 142 7.59E-43 T 23-04-2016 RBRH_RS00440 494fb63b1e80a12cdd1057b037ae811b 184 SMART SM00317 4 122 4.7E-27 T 23-04-2016 IPR001214 SET domain GO:0005515 RBRH_RS00440 494fb63b1e80a12cdd1057b037ae811b 184 Gene3D G3DSA:2.170.270.10 4 145 5.8E-43 T 23-04-2016 RBRH_RS00440 494fb63b1e80a12cdd1057b037ae811b 184 PANTHER PTHR22884 4 135 2.3E-30 T 23-04-2016 RBRH_RS00440 494fb63b1e80a12cdd1057b037ae811b 184 PANTHER PTHR22884:SF336 4 135 2.3E-30 T 23-04-2016 RBRH_RS00440 494fb63b1e80a12cdd1057b037ae811b 184 Pfam PF00856 SET domain 15 116 7.4E-17 T 23-04-2016 IPR001214 SET domain GO:0005515 RBRH_RS08060 21b368421252818fb036fe7c61a26fd9 187 PANTHER PTHR10516:SF316 1 82 2.4E-13 T 23-04-2016 RBRH_RS08060 21b368421252818fb036fe7c61a26fd9 187 PANTHER PTHR10516:SF316 131 174 2.4E-13 T 23-04-2016 RBRH_RS08060 21b368421252818fb036fe7c61a26fd9 187 Gene3D G3DSA:3.10.50.40 124 141 6.7E-6 T 23-04-2016 RBRH_RS08060 21b368421252818fb036fe7c61a26fd9 187 Gene3D G3DSA:3.10.50.40 3 68 6.7E-6 T 23-04-2016 RBRH_RS08060 21b368421252818fb036fe7c61a26fd9 187 SUPERFAMILY SSF54534 2 142 2.95E-26 T 23-04-2016 RBRH_RS08060 21b368421252818fb036fe7c61a26fd9 187 PANTHER PTHR10516 1 82 2.4E-13 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RBRH_RS08060 21b368421252818fb036fe7c61a26fd9 187 PANTHER PTHR10516 131 174 2.4E-13 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RBRH_RS09200 fef2d0a50f48ea9702a56f75ccbcb8bc 106 Pfam PF00893 Small Multidrug Resistance protein 1 87 3.3E-25 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 RBRH_RS09200 fef2d0a50f48ea9702a56f75ccbcb8bc 106 PANTHER PTHR30561 1 106 3.9E-44 T 23-04-2016 RBRH_RS09200 fef2d0a50f48ea9702a56f75ccbcb8bc 106 SUPERFAMILY SSF103481 4 104 1.57E-18 T 23-04-2016 RBRH_RS09200 fef2d0a50f48ea9702a56f75ccbcb8bc 106 PANTHER PTHR30561:SF0 1 106 3.9E-44 T 23-04-2016 RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 1.1E-39 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 1.1E-39 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 1.1E-39 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 1.1E-39 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 1.1E-39 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 38.337 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 3.3E-130 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 PANTHER PTHR22855:SF17 1 286 5.1E-158 T 23-04-2016 RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 Gene3D G3DSA:3.90.226.10 20 288 1.1E-73 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 Pfam PF01039 Carboxyl transferase domain 102 242 9.6E-15 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 SUPERFAMILY SSF52096 27 285 1.55E-87 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS08755 b7d5aad85e32d3f32752e4537513dae7 290 PANTHER PTHR22855 1 286 5.1E-158 T 23-04-2016 RBRH_RS04885 f020a63ebeb0929af65f52dbded24866 442 Gene3D G3DSA:3.90.1150.10 3 62 1.1E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS04885 f020a63ebeb0929af65f52dbded24866 442 Gene3D G3DSA:3.90.1150.10 344 440 1.1E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS04885 f020a63ebeb0929af65f52dbded24866 442 PIRSF PIRSF000521 26 441 4.6E-25 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS04885 f020a63ebeb0929af65f52dbded24866 442 Pfam PF00202 Aminotransferase class-III 19 438 1.2E-107 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS04885 f020a63ebeb0929af65f52dbded24866 442 Gene3D G3DSA:3.40.640.10 63 342 5.7E-77 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS04885 f020a63ebeb0929af65f52dbded24866 442 PANTHER PTHR11986 1 439 1.8E-238 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS04885 f020a63ebeb0929af65f52dbded24866 442 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS04885 f020a63ebeb0929af65f52dbded24866 442 SUPERFAMILY SSF53383 1 440 7.98E-118 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS04885 f020a63ebeb0929af65f52dbded24866 442 PANTHER PTHR11986:SF80 1 439 1.8E-238 T 23-04-2016 RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 PANTHER PTHR11070:SF19 1 521 2.0E-282 T 23-04-2016 RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 PANTHER PTHR11070:SF19 570 685 2.0E-282 T 23-04-2016 RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 Pfam PF13361 UvrD-like helicase C-terminal domain 281 661 5.5E-58 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 126 4.6E-36 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 Pfam PF00580 UvrD/REP helicase N-terminal domain 137 275 1.4E-34 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 SUPERFAMILY SSF52540 594 682 9.57E-155 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 SUPERFAMILY SSF52540 2 525 9.57E-155 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 710 39.308 T 23-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 PANTHER PTHR11070 1 521 2.0E-282 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 PANTHER PTHR11070 570 685 2.0E-282 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 Gene3D G3DSA:3.40.50.300 593 683 1.2E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 Gene3D G3DSA:3.40.50.300 290 392 1.2E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 Gene3D G3DSA:1.10.486.10 393 535 3.5E-37 T 23-04-2016 RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 Gene3D G3DSA:3.40.50.300 192 289 6.3E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 Gene3D G3DSA:3.40.50.300 3 117 6.3E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00620 fac42e2ee29450e6b2631f8a42b13e83 714 Gene3D G3DSA:1.10.10.160 121 191 4.0E-15 T 23-04-2016 IPR013986 DExx box DNA helicase domain RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 Pfam PF00575 S1 RNA binding domain 655 725 2.6E-19 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 Gene3D G3DSA:2.40.50.140 638 726 9.6E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 SUPERFAMILY SSF53098 326 474 1.06E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 Pfam PF16921 Tex protein YqgF-like domain 331 456 5.8E-51 T 23-04-2016 IPR032639 Tex protein, YqgF-like domain RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 SUPERFAMILY SSF47781 475 563 4.15E-29 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 Pfam PF09371 Tex-like protein N-terminal domain 13 196 3.5E-69 T 23-04-2016 IPR018974 Tex-like protein, N-terminal RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 SUPERFAMILY SSF50249 642 729 2.24E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 SMART SM00316 654 725 9.3E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 Gene3D G3DSA:1.10.10.650 5 113 4.2E-46 T 23-04-2016 IPR023319 Tex-like protein, HTH domain RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 SUPERFAMILY SSF47781 565 637 4.89E-20 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 SMART SM00732 330 429 9.6E-36 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 Gene3D G3DSA:1.10.3500.10 114 326 2.1E-102 T 23-04-2016 IPR023323 Tex-like domain RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 Gene3D G3DSA:1.10.3500.10 456 502 2.1E-102 T 23-04-2016 IPR023323 Tex-like domain RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 Pfam PF12836 Helix-hairpin-helix motif 496 560 5.1E-28 T 23-04-2016 RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 SUPERFAMILY SSF158832 6 325 1.7E-118 T 23-04-2016 RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 PANTHER PTHR10724 8 766 0.0 T 23-04-2016 RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 PANTHER PTHR10724:SF1 8 766 0.0 T 23-04-2016 RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 Gene3D G3DSA:1.10.150.310 504 635 2.1E-47 T 23-04-2016 IPR023097 Tex RuvX-like domain RBRH_RS05865 b48cea34d1677b363fc14fd05af14a60 778 Gene3D G3DSA:3.30.420.140 330 455 1.0E-50 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RBRH_RS01325 55ebf50bb772c3ba6393b905f90995d7 305 PANTHER PTHR33694:SF1 1 305 1.6E-129 T 23-04-2016 RBRH_RS01325 55ebf50bb772c3ba6393b905f90995d7 305 PANTHER PTHR33694 1 305 1.6E-129 T 23-04-2016 RBRH_RS01325 55ebf50bb772c3ba6393b905f90995d7 305 SUPERFAMILY SSF54211 133 276 2.2E-51 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS01325 55ebf50bb772c3ba6393b905f90995d7 305 Gene3D G3DSA:3.30.1700.10 128 282 2.2E-59 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RBRH_RS01325 55ebf50bb772c3ba6393b905f90995d7 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 2.7E-107 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RBRH_RS01325 55ebf50bb772c3ba6393b905f90995d7 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 49.354 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RBRH_RS01325 55ebf50bb772c3ba6393b905f90995d7 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 296 3.2E-125 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RBRH_RS01325 55ebf50bb772c3ba6393b905f90995d7 305 SUPERFAMILY SSF54211 3 123 4.78E-41 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS01325 55ebf50bb772c3ba6393b905f90995d7 305 Gene3D G3DSA:3.30.230.20 3 125 3.1E-45 T 23-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RBRH_RS09655 6bc0bd74ec7f359ea85d9f325de0b533 229 SUPERFAMILY SSF161098 8 206 9.05E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS09655 6bc0bd74ec7f359ea85d9f325de0b533 229 PANTHER PTHR30133 2 229 8.4E-139 T 23-04-2016 RBRH_RS09655 6bc0bd74ec7f359ea85d9f325de0b533 229 Gene3D G3DSA:1.10.3720.10 8 220 7.8E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS09655 6bc0bd74ec7f359ea85d9f325de0b533 229 PANTHER PTHR30133:SF1 2 229 8.4E-139 T 23-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 RBRH_RS09655 6bc0bd74ec7f359ea85d9f325de0b533 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 220 2.9E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS09655 6bc0bd74ec7f359ea85d9f325de0b533 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 5.4E-19 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RBRH_RS01160 381a69a537198ea4a2d7a8e38ed980ec 262 Pfam PF08874 Domain of unknown function (DUF1835) 4 119 2.0E-28 T 23-04-2016 IPR014973 Protein of unknown function DUF1835 RBRH_RS01160 381a69a537198ea4a2d7a8e38ed980ec 262 Pfam PF12395 Protein of unknown function 151 251 3.8E-25 T 23-04-2016 IPR022123 Protein of unknown function DUF3658 RBRH_RS04630 9e8a83de7a1a6c1bf4f4e24fecb1b2ee 124 Gene3D G3DSA:1.20.120.20 38 90 8.1E-4 T 23-04-2016 RBRH_RS04630 9e8a83de7a1a6c1bf4f4e24fecb1b2ee 124 PANTHER PTHR35893 32 123 2.1E-18 T 23-04-2016 RBRH_RS04630 9e8a83de7a1a6c1bf4f4e24fecb1b2ee 124 PANTHER PTHR35893:SF3 32 123 2.1E-18 T 23-04-2016 RBRH_RS04630 9e8a83de7a1a6c1bf4f4e24fecb1b2ee 124 Pfam PF05957 Bacterial protein of unknown function (DUF883) 35 123 2.2E-23 T 23-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RBRH_RS04630 9e8a83de7a1a6c1bf4f4e24fecb1b2ee 124 SUPERFAMILY SSF58113 4 102 1.7E-5 T 23-04-2016 RBRH_RS01860 7a28d8e8f01e3ef8b0fabaa236460c91 357 Gene3D G3DSA:3.40.50.1400 15 220 1.6E-66 T 23-04-2016 RBRH_RS01860 7a28d8e8f01e3ef8b0fabaa236460c91 357 Hamap MF_00323 Ferrochelatase [hemH]. 15 340 37.832 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RBRH_RS01860 7a28d8e8f01e3ef8b0fabaa236460c91 357 TIGRFAM TIGR00109 hemH: ferrochelatase 14 340 4.8E-92 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RBRH_RS01860 7a28d8e8f01e3ef8b0fabaa236460c91 357 SUPERFAMILY SSF53800 15 346 1.19E-102 T 23-04-2016 RBRH_RS01860 7a28d8e8f01e3ef8b0fabaa236460c91 357 Gene3D G3DSA:3.40.50.1400 221 341 5.6E-35 T 23-04-2016 RBRH_RS01860 7a28d8e8f01e3ef8b0fabaa236460c91 357 PANTHER PTHR11108 16 341 4.4E-118 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RBRH_RS01860 7a28d8e8f01e3ef8b0fabaa236460c91 357 Pfam PF00762 Ferrochelatase 17 339 1.5E-110 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RBRH_RS01860 7a28d8e8f01e3ef8b0fabaa236460c91 357 ProSitePatterns PS00534 Ferrochelatase signature. 209 228 - T 23-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RBRH_RS02900 5dcc14de9ccee907046d1070eb05eeeb 358 Pfam PF12727 PBP superfamily domain 140 322 6.3E-52 T 23-04-2016 IPR024370 PBP domain RBRH_RS02900 5dcc14de9ccee907046d1070eb05eeeb 358 SUPERFAMILY SSF53850 126 339 6.44E-15 T 23-04-2016 RBRH_RS02900 5dcc14de9ccee907046d1070eb05eeeb 358 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 82 1.3E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS02900 5dcc14de9ccee907046d1070eb05eeeb 358 PANTHER PTHR38431 97 351 3.3E-36 T 23-04-2016 RBRH_RS02900 5dcc14de9ccee907046d1070eb05eeeb 358 Gene3D G3DSA:3.40.190.10 203 306 2.1E-12 T 23-04-2016 RBRH_RS02900 5dcc14de9ccee907046d1070eb05eeeb 358 SUPERFAMILY SSF46785 25 140 1.72E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS02900 5dcc14de9ccee907046d1070eb05eeeb 358 Gene3D G3DSA:1.10.10.10 23 128 2.3E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 Gene3D G3DSA:3.40.50.10070 28 151 4.5E-40 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 PANTHER PTHR11731 1 122 4.1E-70 T 23-04-2016 RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 PANTHER PTHR11731 159 427 4.1E-70 T 23-04-2016 RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 Gene3D G3DSA:2.130.10.10 152 427 1.0E-76 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 SUPERFAMILY SSF69304 154 427 2.88E-58 T 23-04-2016 RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 SUPERFAMILY SSF52964 33 160 3.92E-33 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 22 426 5.7E-146 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 Pfam PF07676 WD40-like Beta Propeller Repeat 193 216 1.4E-6 T 23-04-2016 IPR011659 WD40-like Beta Propeller RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 Pfam PF07676 WD40-like Beta Propeller Repeat 276 311 2.5E-14 T 23-04-2016 IPR011659 WD40-like Beta Propeller RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 Pfam PF07676 WD40-like Beta Propeller Repeat 324 358 8.0E-6 T 23-04-2016 IPR011659 WD40-like Beta Propeller RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 Pfam PF07676 WD40-like Beta Propeller Repeat 238 268 1.3E-6 T 23-04-2016 IPR011659 WD40-like Beta Propeller RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 Pfam PF07676 WD40-like Beta Propeller Repeat 368 396 0.075 T 23-04-2016 IPR011659 WD40-like Beta Propeller RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 PANTHER PTHR11731:SF123 1 122 4.1E-70 T 23-04-2016 RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 PANTHER PTHR11731:SF123 159 427 4.1E-70 T 23-04-2016 RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 Pfam PF04052 TolB amino-terminal domain 28 128 1.3E-26 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RBRH_RS08575 af5b2f936d31fa07ef23fd625a9db190 430 Hamap MF_00671 Protein TolB [tolB]. 9 425 33.218 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 Pfam PF03958 Bacterial type II/III secretion system short domain 196 268 1.1E-15 T 23-04-2016 IPR005644 NolW-like RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 Pfam PF03958 Bacterial type II/III secretion system short domain 273 412 6.8E-19 T 23-04-2016 IPR005644 NolW-like RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 Pfam PF03958 Bacterial type II/III secretion system short domain 133 190 2.3E-11 T 23-04-2016 IPR005644 NolW-like RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 36 688 9.8E-198 T 23-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 PRINTS PR00811 Bacterial general secretion pathway protein D signature 645 663 3.1E-33 T 23-04-2016 IPR001775 GspD/PilQ family RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 PRINTS PR00811 Bacterial general secretion pathway protein D signature 412 422 3.1E-33 T 23-04-2016 IPR001775 GspD/PilQ family RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 PRINTS PR00811 Bacterial general secretion pathway protein D signature 543 553 3.1E-33 T 23-04-2016 IPR001775 GspD/PilQ family RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 PRINTS PR00811 Bacterial general secretion pathway protein D signature 668 682 3.1E-33 T 23-04-2016 IPR001775 GspD/PilQ family RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 PRINTS PR00811 Bacterial general secretion pathway protein D signature 508 532 3.1E-33 T 23-04-2016 IPR001775 GspD/PilQ family RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 Pfam PF00263 Bacterial type II and III secretion system protein 512 681 3.7E-50 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 PANTHER PTHR30332:SF8 9 455 1.1E-156 T 23-04-2016 RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 PANTHER PTHR30332:SF8 473 722 1.1E-156 T 23-04-2016 RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 PANTHER PTHR30332 9 455 1.1E-156 T 23-04-2016 RBRH_RS00395 c8015e7aeedd4d03e4772bab014219fa 739 PANTHER PTHR30332 473 722 1.1E-156 T 23-04-2016 RBRH_RS01060 2b80ee051728eee6943918950bc55895 316 PANTHER PTHR12526 201 315 3.7E-17 T 23-04-2016 RBRH_RS01060 2b80ee051728eee6943918950bc55895 316 Gene3D G3DSA:3.40.50.2000 212 292 4.9E-6 T 23-04-2016 RBRH_RS01060 2b80ee051728eee6943918950bc55895 316 SUPERFAMILY SSF53756 17 313 3.19E-17 T 23-04-2016 RBRH_RS01060 2b80ee051728eee6943918950bc55895 316 Pfam PF00534 Glycosyl transferases group 1 202 292 5.3E-9 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 Pfam PF08220 DeoR-like helix-turn-helix domain 12 67 4.0E-18 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 12 46 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 Gene3D G3DSA:1.10.10.10 6 64 5.8E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 PANTHER PTHR30363 6 258 1.8E-99 T 23-04-2016 RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 Gene3D G3DSA:3.30.750.70 79 178 8.8E-13 T 23-04-2016 RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 SUPERFAMILY SSF46785 9 80 1.33E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 Pfam PF00455 DeoR C terminal sensor domain 81 237 2.2E-53 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 PANTHER PTHR30363:SF1 6 258 1.8E-99 T 23-04-2016 RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 SUPERFAMILY SSF100950 79 238 7.67E-28 T 23-04-2016 RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 SMART SM01134 78 239 1.3E-73 T 23-04-2016 RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 30 44 1.5E-8 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 44 62 1.5E-8 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RBRH_RS10385 66c950c3b9419b86b0fd24e1cfe386a3 259 SMART SM00420 12 64 1.3E-18 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 Pfam PF00140 Sigma-70 factor, region 1.2 36 63 2.6E-4 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 34 305 8.8E-122 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 15 306 51.701 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 PANTHER PTHR30376 22 304 2.8E-98 T 23-04-2016 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 274 300 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 PRINTS PR00046 Major sigma-70 factor signature 289 300 1.1E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 PRINTS PR00046 Major sigma-70 factor signature 97 110 1.1E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 PRINTS PR00046 Major sigma-70 factor signature 121 129 1.1E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 PRINTS PR00046 Major sigma-70 factor signature 274 289 1.1E-16 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 68 304 3.8E-33 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 Pfam PF04542 Sigma-70 region 2 73 142 9.5E-19 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 97 110 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 Gene3D G3DSA:1.10.10.10 241 306 7.9E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 Pfam PF04545 Sigma-70, region 4 246 301 2.1E-14 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 Gene3D G3DSA:1.10.601.10 35 142 2.8E-37 T 23-04-2016 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 SUPERFAMILY SSF88659 208 306 8.41E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS11140 a1cbfb0c5744c0d59824c2a1e5a9e6be 308 SUPERFAMILY SSF88946 34 142 2.62E-39 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS00135 2d6057be749040c6e4e1156c006d3967 149 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 12 145 4.0E-33 T 23-04-2016 IPR011747 Conserved hypothetical protein CHP02241 RBRH_RS00135 2d6057be749040c6e4e1156c006d3967 149 Pfam PF06841 T4-like virus tail tube protein gp19 17 144 6.6E-33 T 23-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 RBRH_RS00135 2d6057be749040c6e4e1156c006d3967 149 PANTHER PTHR38009 6 148 7.0E-13 T 23-04-2016 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 Pfam PF02875 Mur ligase family, glutamate ligase domain 360 420 9.3E-7 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 PANTHER PTHR23135 4 503 2.2E-127 T 23-04-2016 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 PANTHER PTHR23135:SF2 4 503 2.2E-127 T 23-04-2016 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 Pfam PF08245 Mur ligase middle domain 131 339 1.6E-27 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 SUPERFAMILY SSF53623 299 356 1.57E-48 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 SUPERFAMILY SSF53623 124 268 1.57E-48 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 Gene3D G3DSA:3.90.190.20 360 492 4.2E-44 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 Gene3D G3DSA:3.40.50.720 13 106 6.5E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 SUPERFAMILY SSF51984 10 107 4.9E-11 T 23-04-2016 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 Gene3D G3DSA:3.40.1190.10 107 358 2.0E-70 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 12 497 32.035 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 15 493 5.2E-108 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01280 3826b3c5e9bccf8ed0aa2a9c35f4e6a7 505 SUPERFAMILY SSF53244 358 496 2.29E-40 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 Gene3D G3DSA:3.40.50.920 549 676 1.2E-45 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 Pfam PF02779 Transketolase, pyrimidine binding domain 358 534 5.1E-45 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 PANTHER PTHR11624 5 312 0.0 T 23-04-2016 IPR033247 Transketolase family RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 PANTHER PTHR11624 345 676 0.0 T 23-04-2016 IPR033247 Transketolase family RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 Gene3D G3DSA:3.40.50.970 10 324 5.5E-131 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 PANTHER PTHR11624:SF1 5 312 0.0 T 23-04-2016 RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 PANTHER PTHR11624:SF1 345 676 0.0 T 23-04-2016 RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 11 338 8.6E-164 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 SUPERFAMILY SSF52518 354 535 1.47E-61 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 SUPERFAMILY SSF52518 8 324 3.4E-121 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 SMART SM00861 359 536 1.3E-64 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 TIGRFAM TIGR00232 tktlase_bact: transketolase 12 676 1.1E-287 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 ProSitePatterns PS00801 Transketolase signature 1. 17 37 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 Gene3D G3DSA:3.40.50.970 331 544 2.6E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 SUPERFAMILY SSF52922 544 677 3.66E-41 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RBRH_RS01600 9abb5365e51023081521e6cc1a14825c 677 Pfam PF02780 Transketolase, C-terminal domain 563 668 1.7E-15 T 23-04-2016 IPR033248 Transketolase, C-terminal domain RBRH_RS15595 f2b0cdea3f4e0d025375b7aa4e890446 211 Gene3D G3DSA:1.10.287.130 165 200 3.3E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS15595 f2b0cdea3f4e0d025375b7aa4e890446 211 SUPERFAMILY SSF47384 159 200 8.63E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SUPERFAMILY SSF50249 13 122 9.7E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Gene3D G3DSA:2.40.50.140 373 452 6.4E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PIRSF PIRSF002111 1 543 3.0E-214 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PANTHER PTHR10724 11 523 7.3E-244 T 23-04-2016 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SUPERFAMILY SSF50249 264 363 1.64E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Gene3D G3DSA:2.40.50.140 30 110 1.5E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Gene3D G3DSA:2.40.50.140 290 372 2.8E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SUPERFAMILY SSF50249 113 193 9.29E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Pfam PF00575 S1 RNA binding domain 370 443 2.7E-19 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Pfam PF00575 S1 RNA binding domain 28 94 5.8E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Pfam PF00575 S1 RNA binding domain 285 356 1.7E-21 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Pfam PF00575 S1 RNA binding domain 459 529 3.7E-16 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Pfam PF00575 S1 RNA binding domain 114 180 8.8E-12 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Pfam PF00575 S1 RNA binding domain 198 269 6.7E-23 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SMART SM00316 284 356 7.2E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SMART SM00316 371 443 5.2E-22 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SMART SM00316 458 529 1.0E-19 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SMART SM00316 112 180 4.4E-9 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SMART SM00316 199 269 1.9E-29 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SMART SM00316 28 96 0.11 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SUPERFAMILY SSF50249 438 540 1.42E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PRINTS PR00681 Ribosomal protein S1 signature 48 62 1.5E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PRINTS PR00681 Ribosomal protein S1 signature 30 48 1.5E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PRINTS PR00681 Ribosomal protein S1 signature 221 242 1.5E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PRINTS PR00681 Ribosomal protein S1 signature 339 357 1.5E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PRINTS PR00681 Ribosomal protein S1 signature 299 318 1.5E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PRINTS PR00681 Ribosomal protein S1 signature 117 133 1.5E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PRINTS PR00681 Ribosomal protein S1 signature 164 184 1.5E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PRINTS PR00681 Ribosomal protein S1 signature 135 152 1.5E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PRINTS PR00681 Ribosomal protein S1 signature 93 112 1.5E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SUPERFAMILY SSF50249 198 285 1.0E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 12 529 2.8E-206 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 SUPERFAMILY SSF50249 355 449 2.46E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 PANTHER PTHR10724:SF6 11 523 7.3E-244 T 23-04-2016 RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Gene3D G3DSA:2.40.50.140 453 530 2.0E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Gene3D G3DSA:2.40.50.140 111 181 2.5E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS02970 04064fdd28ed573074f80073a9dae9de 571 Gene3D G3DSA:2.40.50.140 193 271 3.6E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS10325 1ba57722ff48247958757dc8991a7a4a 425 PRINTS PR00447 Natural resistance-associated macrophage protein signature 212 235 4.16E-33 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RBRH_RS10325 1ba57722ff48247958757dc8991a7a4a 425 PRINTS PR00447 Natural resistance-associated macrophage protein signature 314 333 4.16E-33 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RBRH_RS10325 1ba57722ff48247958757dc8991a7a4a 425 PRINTS PR00447 Natural resistance-associated macrophage protein signature 162 183 4.16E-33 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RBRH_RS10325 1ba57722ff48247958757dc8991a7a4a 425 PRINTS PR00447 Natural resistance-associated macrophage protein signature 109 135 4.16E-33 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RBRH_RS10325 1ba57722ff48247958757dc8991a7a4a 425 PRINTS PR00447 Natural resistance-associated macrophage protein signature 137 156 4.16E-33 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RBRH_RS10325 1ba57722ff48247958757dc8991a7a4a 425 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 13 424 34.909 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RBRH_RS10325 1ba57722ff48247958757dc8991a7a4a 425 Pfam PF01566 Natural resistance-associated macrophage protein 50 397 8.6E-121 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RBRH_RS10325 1ba57722ff48247958757dc8991a7a4a 425 PANTHER PTHR11706:SF42 1 424 1.2E-163 T 23-04-2016 RBRH_RS10325 1ba57722ff48247958757dc8991a7a4a 425 PANTHER PTHR11706 1 424 1.2E-163 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RBRH_RS10325 1ba57722ff48247958757dc8991a7a4a 425 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 30 392 5.7E-93 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 Pfam PF01493 GXGXG motif 1311 1497 5.9E-85 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 Gene3D G3DSA:3.20.20.70 871 1275 7.6E-183 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 SUPERFAMILY SSF69336 1279 1559 5.1E-97 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 PANTHER PTHR11938 977 1495 0.0 T 23-04-2016 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 PANTHER PTHR11938 19 955 0.0 T 23-04-2016 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 PANTHER PTHR11938 1512 1563 0.0 T 23-04-2016 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 SUPERFAMILY SSF56235 30 455 2.12E-153 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 Gene3D G3DSA:3.60.20.10 30 464 3.3E-188 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 Gene3D G3DSA:3.20.20.70 478 822 1.5E-107 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 SUPERFAMILY SSF51395 483 1275 1.42E-261 T 23-04-2016 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 Gene3D G3DSA:2.160.20.60 1284 1567 2.8E-109 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 Pfam PF00310 Glutamine amidotransferases class-II 30 453 2.1E-186 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 Pfam PF01645 Conserved region in glutamate synthase 833 1230 3.8E-155 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 PANTHER PTHR11938:SF1 977 1495 0.0 T 23-04-2016 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 PANTHER PTHR11938:SF1 19 955 0.0 T 23-04-2016 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 PANTHER PTHR11938:SF1 1512 1563 0.0 T 23-04-2016 RBRH_RS04655 8fc239c1476f3c53f8d8a8d694780605 1575 Pfam PF04898 Glutamate synthase central domain 486 772 4.3E-110 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 RBRH_RS03075 74d9b24f401773cacfaded65421fd03c 84 Gene3D G3DSA:3.30.1320.10 1 81 1.8E-32 T 23-04-2016 IPR023803 Ribosomal protein S16 domain RBRH_RS03075 74d9b24f401773cacfaded65421fd03c 84 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 77 23.113 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03075 74d9b24f401773cacfaded65421fd03c 84 PANTHER PTHR12919 1 77 6.3E-34 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03075 74d9b24f401773cacfaded65421fd03c 84 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 7.9E-28 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03075 74d9b24f401773cacfaded65421fd03c 84 Pfam PF00886 Ribosomal protein S16 8 67 8.4E-24 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03075 74d9b24f401773cacfaded65421fd03c 84 SUPERFAMILY SSF54565 1 79 3.66E-29 T 23-04-2016 IPR023803 Ribosomal protein S16 domain RBRH_RS01920 e463e5ebce218799d90067dbb46b673b 274 Gene3D G3DSA:1.10.8.60 205 270 2.2E-26 T 23-04-2016 RBRH_RS01920 e463e5ebce218799d90067dbb46b673b 274 Pfam PF00308 Bacterial dnaA protein 139 247 8.3E-7 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RBRH_RS01920 e463e5ebce218799d90067dbb46b673b 274 PANTHER PTHR30050 47 273 2.9E-45 T 23-04-2016 RBRH_RS01920 e463e5ebce218799d90067dbb46b673b 274 SUPERFAMILY SSF52540 55 250 3.1E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01920 e463e5ebce218799d90067dbb46b673b 274 Gene3D G3DSA:3.40.50.300 46 200 4.3E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01920 e463e5ebce218799d90067dbb46b673b 274 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 48 270 4.7E-70 T 23-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 RBRH_RS01920 e463e5ebce218799d90067dbb46b673b 274 PANTHER PTHR30050:SF5 47 273 2.9E-45 T 23-04-2016 RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 29.087 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 PANTHER PTHR30081 7 314 6.8E-72 T 23-04-2016 RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 97 280 1.7E-49 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 1.7E-73 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 Pfam PF07549 SecD/SecF GG Motif 32 53 1.1E-5 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 Pfam PF02355 Protein export membrane protein 107 291 3.5E-63 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 3.5E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 3.5E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 3.5E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 3.5E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 SUPERFAMILY SSF82866 71 294 2.09E-39 T 23-04-2016 RBRH_RS01725 43438a12729f9aab620ac5ce66441afb 316 Gene3D G3DSA:1.20.1640.10 100 297 4.4E-27 T 23-04-2016 RBRH_RS00840 89fd042e8703fcdb114da26824ea725f 111 Gene3D G3DSA:1.10.1220.10 73 108 6.3E-5 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RBRH_RS00840 89fd042e8703fcdb114da26824ea725f 111 SUPERFAMILY SSF143100 1 76 6.02E-14 T 23-04-2016 RBRH_RS00840 89fd042e8703fcdb114da26824ea725f 111 Pfam PF05534 HicB family 55 105 7.9E-20 T 23-04-2016 IPR008651 Uncharacterised protein family HicB RBRH_RS00840 89fd042e8703fcdb114da26824ea725f 111 SUPERFAMILY SSF47598 71 108 7.56E-7 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RBRH_RS11980 8dddf2dd3eda9e17d2f6b3e3659953b2 255 PANTHER PTHR22726 9 253 1.4E-32 T 23-04-2016 RBRH_RS11980 8dddf2dd3eda9e17d2f6b3e3659953b2 255 Gene3D G3DSA:3.30.2010.10 66 130 2.1E-5 T 23-04-2016 RBRH_RS11980 8dddf2dd3eda9e17d2f6b3e3659953b2 255 Pfam PF01435 Peptidase family M48 56 229 4.3E-13 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 SUPERFAMILY SSF88659 244 339 1.49E-23 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 SUPERFAMILY SSF88946 63 174 3.61E-44 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 SUPERFAMILY SSF88659 177 260 1.18E-6 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 Pfam PF04542 Sigma-70 region 2 104 173 6.8E-20 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 15 347 37.747 T 23-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 Gene3D G3DSA:1.10.601.10 53 173 3.4E-56 T 23-04-2016 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 99 335 3.4E-35 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 306 332 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 Pfam PF04545 Sigma-70, region 4 281 333 7.2E-18 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 Gene3D G3DSA:1.10.10.10 279 339 7.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 Pfam PF04539 Sigma-70 region 3 185 266 1.9E-6 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 PANTHER PTHR30603:SF15 22 342 2.6E-106 T 23-04-2016 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 PRINTS PR00046 Major sigma-70 factor signature 306 321 1.2E-23 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 PRINTS PR00046 Major sigma-70 factor signature 128 141 1.2E-23 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 PRINTS PR00046 Major sigma-70 factor signature 285 297 1.2E-23 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 PRINTS PR00046 Major sigma-70 factor signature 321 332 1.2E-23 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 PRINTS PR00046 Major sigma-70 factor signature 152 160 1.2E-23 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 58 346 1.7E-136 T 23-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 Pfam PF00140 Sigma-70 factor, region 1.2 66 98 5.1E-8 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 128 141 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05760 8b5b8fc41101e90d018460268fad463d 347 PANTHER PTHR30603 22 342 2.6E-106 T 23-04-2016 RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 Pfam PF13091 PLD-like domain 45 152 4.9E-12 T 23-04-2016 IPR025202 Phospholipase D-like domain RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 Pfam PF13091 PLD-like domain 280 391 1.8E-22 T 23-04-2016 IPR025202 Phospholipase D-like domain RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 SUPERFAMILY SSF56024 24 205 8.9E-38 T 23-04-2016 RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 PANTHER PTHR21248 29 443 6.9E-70 T 23-04-2016 RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 Gene3D G3DSA:3.30.870.10 25 205 6.1E-34 T 23-04-2016 RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 Gene3D G3DSA:3.30.870.10 267 427 3.9E-29 T 23-04-2016 RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 SUPERFAMILY SSF56024 259 423 1.7E-32 T 23-04-2016 RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 Hamap MF_01917 Cardiolipin synthase B [clsB]. 23 446 38.654 T 23-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 SMART SM00155 124 151 6.2 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 SMART SM00155 349 376 12.0 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RBRH_RS10810 4c8065ba8339374da24e00b742d89226 446 PANTHER PTHR21248:SF5 29 443 6.9E-70 T 23-04-2016 RBRH_RS00410 f6d8a1390e05dcd504e2280e89f79128 92 SMART SM00411 1 90 7.8E-38 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS00410 f6d8a1390e05dcd504e2280e89f79128 92 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.1E-32 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS00410 f6d8a1390e05dcd504e2280e89f79128 92 SUPERFAMILY SSF47729 1 90 3.39E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RBRH_RS00410 f6d8a1390e05dcd504e2280e89f79128 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.9E-15 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS00410 f6d8a1390e05dcd504e2280e89f79128 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.9E-15 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS00410 f6d8a1390e05dcd504e2280e89f79128 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.9E-15 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS00410 f6d8a1390e05dcd504e2280e89f79128 92 PANTHER PTHR33175 1 90 1.6E-36 T 23-04-2016 RBRH_RS00410 f6d8a1390e05dcd504e2280e89f79128 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RBRH_RS00410 f6d8a1390e05dcd504e2280e89f79128 92 Gene3D G3DSA:4.10.520.10 1 91 7.2E-36 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RBRH_RS16320 c8da683106c1cfda0a47c61b582cd57a 472 SUPERFAMILY SSF81383 62 110 2.49E-5 T 23-04-2016 IPR001810 F-box domain GO:0005515 RBRH_RS16320 c8da683106c1cfda0a47c61b582cd57a 472 Gene3D G3DSA:1.20.1280.50 67 106 8.9E-4 T 23-04-2016 RBRH_RS09140 1f072cced8e26178d8de68b2dde12b27 338 SUPERFAMILY SSF51735 1 182 5.03E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09140 1f072cced8e26178d8de68b2dde12b27 338 PANTHER PTHR21371 1 337 2.0E-188 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RBRH_RS09140 1f072cced8e26178d8de68b2dde12b27 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 3.8E-134 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RBRH_RS09140 1f072cced8e26178d8de68b2dde12b27 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 45.659 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RBRH_RS09140 1f072cced8e26178d8de68b2dde12b27 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 4.7E-73 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RBRH_RS09140 1f072cced8e26178d8de68b2dde12b27 338 SUPERFAMILY SSF48179 183 332 1.24E-71 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RBRH_RS09140 1f072cced8e26178d8de68b2dde12b27 338 Gene3D G3DSA:1.10.1040.10 29 325 1.8E-114 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RBRH_RS09140 1f072cced8e26178d8de68b2dde12b27 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 2.3E-66 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RBRH_RS04620 94adf902528224de444d279db82b48a0 392 PANTHER PTHR11373 23 391 4.4E-79 T 23-04-2016 RBRH_RS04620 94adf902528224de444d279db82b48a0 392 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 46 178 7.0E-57 T 23-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 RBRH_RS04620 94adf902528224de444d279db82b48a0 392 Pfam PF01966 HD domain 83 213 2.1E-15 T 23-04-2016 IPR006674 HD domain RBRH_RS04620 94adf902528224de444d279db82b48a0 392 Pfam PF13286 Phosphohydrolase-associated domain 300 385 8.7E-27 T 23-04-2016 IPR026875 Phosphohydrolase-associated domain RBRH_RS04620 94adf902528224de444d279db82b48a0 392 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 23 387 38.178 T 23-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RBRH_RS04620 94adf902528224de444d279db82b48a0 392 PANTHER PTHR11373:SF25 23 391 4.4E-79 T 23-04-2016 RBRH_RS04620 94adf902528224de444d279db82b48a0 392 SMART SM00471 79 223 5.6E-11 T 23-04-2016 IPR003607 HD/PDEase domain RBRH_RS04620 94adf902528224de444d279db82b48a0 392 Gene3D G3DSA:1.10.3210.10 44 232 2.8E-81 T 23-04-2016 IPR006674 HD domain RBRH_RS04620 94adf902528224de444d279db82b48a0 392 Gene3D G3DSA:1.10.3210.10 289 387 2.8E-81 T 23-04-2016 IPR006674 HD domain RBRH_RS04620 94adf902528224de444d279db82b48a0 392 SUPERFAMILY SSF109604 34 388 4.26E-90 T 23-04-2016 RBRH_RS06335 f052e2d03bbbb29cdeaa98b0f08bff6b 248 SUPERFAMILY SSF75217 91 244 7.19E-48 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RBRH_RS06335 f052e2d03bbbb29cdeaa98b0f08bff6b 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 79 1.2E-16 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RBRH_RS06335 f052e2d03bbbb29cdeaa98b0f08bff6b 248 SUPERFAMILY SSF55315 4 78 3.88E-16 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like RBRH_RS06335 f052e2d03bbbb29cdeaa98b0f08bff6b 248 Gene3D G3DSA:3.40.1280.10 95 244 1.7E-52 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RBRH_RS06335 f052e2d03bbbb29cdeaa98b0f08bff6b 248 Pfam PF00588 SpoU rRNA Methylase family 97 237 3.9E-39 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RBRH_RS06335 f052e2d03bbbb29cdeaa98b0f08bff6b 248 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 244 44.326 T 23-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RBRH_RS06335 f052e2d03bbbb29cdeaa98b0f08bff6b 248 SMART SM00967 6 82 1.8E-16 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RBRH_RS06335 f052e2d03bbbb29cdeaa98b0f08bff6b 248 Gene3D G3DSA:3.30.1330.30 2 76 4.4E-20 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like RBRH_RS06335 f052e2d03bbbb29cdeaa98b0f08bff6b 248 PANTHER PTHR12029 6 243 3.7E-66 T 23-04-2016 RBRH_RS06335 f052e2d03bbbb29cdeaa98b0f08bff6b 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 243 2.6E-72 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 SUPERFAMILY SSF158472 335 382 1.16E-8 T 23-04-2016 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 SMART SM00388 539 611 8.0E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 Pfam PF08448 PAS fold 406 483 6.9E-8 T 23-04-2016 IPR013656 PAS fold-4 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 Gene3D G3DSA:1.10.287.130 540 607 5.5E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 PRINTS PR00344 Bacterial sensor protein C-terminal signature 718 728 7.9E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 PRINTS PR00344 Bacterial sensor protein C-terminal signature 729 747 7.9E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 PRINTS PR00344 Bacterial sensor protein C-terminal signature 700 714 7.9E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 Pfam PF00672 HAMP domain 315 381 2.1E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 PANTHER PTHR24423 492 757 1.0E-51 T 23-04-2016 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 PANTHER PTHR24423 376 470 1.0E-51 T 23-04-2016 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 PIRSF PIRSF037532 1 777 4.0E-226 T 23-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 SUPERFAMILY SSF55874 602 754 7.33E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 Gene3D G3DSA:3.30.565.10 615 755 4.5E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 Pfam PF00512 His Kinase A (phospho-acceptor) domain 540 607 1.3E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 SUPERFAMILY SSF47384 536 608 5.49E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 SUPERFAMILY SSF55785 389 468 1.77E-9 T 23-04-2016 IPR000014 PAS domain RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 SMART SM00304 333 385 1.7E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 Gene3D G3DSA:3.30.450.20 390 530 3.7E-12 T 23-04-2016 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 650 757 4.8E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 SMART SM00387 650 775 4.1E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 SMART SM00091 399 465 4.7E-4 T 23-04-2016 IPR000014 PAS domain RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 PANTHER PTHR24423:SF471 492 757 1.0E-51 T 23-04-2016 RBRH_RS12085 c972fba3e734cfe7c850219bf6f22a62 814 PANTHER PTHR24423:SF471 376 470 1.0E-51 T 23-04-2016 RBRH_RS04445 c6634fc2d891101c7612cf0d81273907 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 8.8E-57 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RBRH_RS04445 c6634fc2d891101c7612cf0d81273907 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.084 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RBRH_RS04445 c6634fc2d891101c7612cf0d81273907 122 PANTHER PTHR11761 1 122 3.9E-73 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RBRH_RS04445 c6634fc2d891101c7612cf0d81273907 122 SUPERFAMILY SSF50193 1 122 7.19E-51 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RBRH_RS04445 c6634fc2d891101c7612cf0d81273907 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.1E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RBRH_RS04445 c6634fc2d891101c7612cf0d81273907 122 SMART SM01374 1 122 3.0E-85 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RBRH_RS04445 c6634fc2d891101c7612cf0d81273907 122 Gene3D G3DSA:2.40.150.20 1 122 1.0E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RBRH_RS04445 c6634fc2d891101c7612cf0d81273907 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site RBRH_RS01845 b35116867262f0ad7be1706d78e741bd 550 PANTHER PTHR11059 2 550 5.1E-149 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RBRH_RS01845 b35116867262f0ad7be1706d78e741bd 550 SUPERFAMILY SSF52540 299 498 8.92E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01845 b35116867262f0ad7be1706d78e741bd 550 SUPERFAMILY SSF52540 3 50 8.92E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01845 b35116867262f0ad7be1706d78e741bd 550 Gene3D G3DSA:3.40.50.300 1 205 2.2E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01845 b35116867262f0ad7be1706d78e741bd 550 SMART SM00382 21 531 0.0024 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS01845 b35116867262f0ad7be1706d78e741bd 550 Gene3D G3DSA:3.40.50.300 403 492 9.7E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01845 b35116867262f0ad7be1706d78e741bd 550 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 505 8.5E-19 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RBRH_RS01845 b35116867262f0ad7be1706d78e741bd 550 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 549 6.2E-148 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RBRH_RS01845 b35116867262f0ad7be1706d78e741bd 550 SUPERFAMILY SSF52540 1 216 5.49E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01845 b35116867262f0ad7be1706d78e741bd 550 PIRSF PIRSF003128 1 550 9.4E-153 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RBRH_RS07070 8a7a67e14351b39348d2099dfb592710 67 Gene3D G3DSA:3.50.50.60 6 65 2.0E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS08170 f9b5a779ed4c86c432a7400e4094615d 275 PANTHER PTHR21496 10 268 1.0E-81 T 23-04-2016 RBRH_RS08170 f9b5a779ed4c86c432a7400e4094615d 275 PANTHER PTHR21496:SF10 10 268 1.0E-81 T 23-04-2016 RBRH_RS08170 f9b5a779ed4c86c432a7400e4094615d 275 Pfam PF04305 Protein of unknown function (DUF455) 21 265 3.5E-97 T 23-04-2016 IPR007402 Protein of unknown function DUF455 RBRH_RS08170 f9b5a779ed4c86c432a7400e4094615d 275 PIRSF PIRSF012318 4 273 5.0E-99 T 23-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 RBRH_RS08170 f9b5a779ed4c86c432a7400e4094615d 275 SUPERFAMILY SSF47240 79 255 3.01E-20 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS08615 ec2a7682ab4d7e7023dee0d832bcd63b 265 SUPERFAMILY SSF55729 37 211 7.22E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS08615 ec2a7682ab4d7e7023dee0d832bcd63b 265 PANTHER PTHR13256:SF22 20 234 3.4E-94 T 23-04-2016 RBRH_RS08615 ec2a7682ab4d7e7023dee0d832bcd63b 265 PANTHER PTHR13256 20 234 3.4E-94 T 23-04-2016 RBRH_RS08615 ec2a7682ab4d7e7023dee0d832bcd63b 265 Pfam PF13302 Acetyltransferase (GNAT) domain 48 187 6.8E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RBRH_RS08615 ec2a7682ab4d7e7023dee0d832bcd63b 265 Gene3D G3DSA:3.40.630.30 28 227 5.5E-57 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS11620 62452d6b81a17b2021ae920cabe47981 116 SUPERFAMILY SSF117396 32 106 2.75E-6 T 23-04-2016 IPR002763 Protein of unknown function DUF72 RBRH_RS11620 62452d6b81a17b2021ae920cabe47981 116 Gene3D G3DSA:3.20.20.410 38 111 1.3E-6 T 23-04-2016 IPR002763 Protein of unknown function DUF72 RBRH_RS11620 62452d6b81a17b2021ae920cabe47981 116 Pfam PF01904 Protein of unknown function DUF72 32 111 1.4E-7 T 23-04-2016 IPR002763 Protein of unknown function DUF72 RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 Pfam PF00586 AIR synthase related protein, N-terminal domain 31 142 1.8E-25 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 5 326 28.007 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 PIRSF PIRSF005303 1 322 4.5E-77 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 SUPERFAMILY SSF56042 148 300 1.64E-34 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 Pfam PF02769 AIR synthase related protein, C-terminal domain 156 301 1.9E-7 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 Gene3D G3DSA:3.30.1330.10 4 146 5.3E-45 T 23-04-2016 IPR016188 PurM-like, N-terminal domain RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 7 302 2.3E-93 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 SUPERFAMILY SSF55326 5 148 2.44E-33 T 23-04-2016 RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 Gene3D G3DSA:3.90.650.10 150 338 2.0E-40 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 PANTHER PTHR30270:SF0 4 299 7.3E-98 T 23-04-2016 RBRH_RS01570 146f0d74cda062df13dbacfb621e250b 341 PANTHER PTHR30270 4 299 7.3E-98 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 SMART SM00388 147 216 2.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 SUPERFAMILY SSF55874 220 373 9.43E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 SMART SM00387 256 376 3.2E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 Pfam PF00512 His Kinase A (phospho-acceptor) domain 149 212 2.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 SUPERFAMILY SSF47384 138 212 5.49E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 355 3.6E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 373 3.6E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 322 3.6E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 336 3.6E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 Gene3D G3DSA:1.10.287.130 139 209 6.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 Gene3D G3DSA:3.30.565.10 219 375 4.6E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 SUPERFAMILY SSF55785 27 76 1.16E-5 T 23-04-2016 IPR000014 PAS domain RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 Gene3D G3DSA:3.30.450.20 27 120 1.8E-11 T 23-04-2016 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 PANTHER PTHR24423 27 376 4.4E-82 T 23-04-2016 RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 256 375 1.3E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS08405 0dac4770f40d698b8578770bb6922da7 376 PANTHER PTHR24423:SF488 27 376 4.4E-82 T 23-04-2016 RBRH_RS04335 b700ff15771d7050f41fe3380111617d 165 Pfam PF00466 Ribosomal protein L10 5 98 6.5E-23 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RBRH_RS04335 b700ff15771d7050f41fe3380111617d 165 SUPERFAMILY SSF160369 4 159 9.81E-50 T 23-04-2016 RBRH_RS04335 b700ff15771d7050f41fe3380111617d 165 PANTHER PTHR11560 3 160 9.1E-48 T 23-04-2016 RBRH_RS04335 b700ff15771d7050f41fe3380111617d 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 27.335 T 23-04-2016 IPR022973 Ribosomal protein L10 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 SUPERFAMILY SSF46626 42 169 2.36E-24 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 PIRSF PIRSF000018 15 432 9.6E-155 T 23-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 Gene3D G3DSA:1.10.760.10 325 429 8.6E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 Pfam PF00034 Cytochrome c 49 148 1.2E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 Pfam PF00034 Cytochrome c 204 299 4.6E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 323 407 1.6E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 SUPERFAMILY SSF46626 193 300 1.03E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 PANTHER PTHR35008:SF5 35 428 8.1E-183 T 23-04-2016 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 PANTHER PTHR35008 35 428 8.1E-183 T 23-04-2016 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 SUPERFAMILY SSF46626 324 428 1.78E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 Gene3D G3DSA:1.10.760.10 45 148 3.2E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10365 25504a8129d662982a3c066cc58c1c6d 432 Gene3D G3DSA:1.10.760.10 192 299 1.6E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 SUPERFAMILY SSF103088 100 212 1.96E-39 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 ProSitePatterns PS01068 OmpA-like domain. 144 188 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 Pfam PF13441 YMGG-like Gly-zipper 32 74 1.6E-7 T 23-04-2016 IPR027367 YMGG-like Gly-zipper RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 175 194 3.9E-8 T 23-04-2016 RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 157 174 3.9E-8 T 23-04-2016 RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 195 215 3.9E-8 T 23-04-2016 RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 PRINTS PR01021 OMPA domain signature 142 157 2.1E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 PRINTS PR01021 OMPA domain signature 157 173 2.1E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 PRINTS PR01021 OMPA domain signature 112 134 2.1E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 Pfam PF00691 OmpA family 112 206 6.9E-24 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 PANTHER PTHR30128 31 213 3.2E-50 T 23-04-2016 RBRH_RS02565 ef7b0a2d5b2c8637b6c1d375bc969bad 220 Gene3D G3DSA:3.30.1330.60 101 212 1.8E-41 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 SUPERFAMILY SSF56954 62 478 5.36E-96 T 23-04-2016 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 SUPERFAMILY SSF56954 7 36 5.36E-96 T 23-04-2016 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 Gene3D G3DSA:2.20.200.10 324 361 2.8E-12 T 23-04-2016 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 Gene3D G3DSA:2.20.200.10 109 150 2.8E-12 T 23-04-2016 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 PANTHER PTHR30203:SF3 6 495 9.5E-131 T 23-04-2016 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 Pfam PF02321 Outer membrane efflux protein 71 263 5.3E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 Pfam PF02321 Outer membrane efflux protein 288 474 2.0E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 PANTHER PTHR30203 6 495 9.5E-131 T 23-04-2016 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 Gene3D G3DSA:1.20.1600.10 57 97 2.4E-89 T 23-04-2016 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 Gene3D G3DSA:1.20.1600.10 151 323 2.4E-89 T 23-04-2016 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 Gene3D G3DSA:1.20.1600.10 363 476 2.4E-89 T 23-04-2016 RBRH_RS05205 8d88544b00dc16ae5702084a0b8b701f 501 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 476 1.0E-117 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RBRH_RS03385 6f60ba2794bcf45adc8bb6509a0c4cc0 308 PANTHER PTHR33991 70 305 2.6E-42 T 23-04-2016 RBRH_RS03385 6f60ba2794bcf45adc8bb6509a0c4cc0 308 SUPERFAMILY SSF50249 71 145 1.06E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS03385 6f60ba2794bcf45adc8bb6509a0c4cc0 308 Pfam PF02565 Recombination protein O C terminal 152 299 1.0E-19 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RBRH_RS03385 6f60ba2794bcf45adc8bb6509a0c4cc0 308 TIGRFAM TIGR00613 reco: DNA repair protein RecO 74 272 2.3E-29 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RBRH_RS03385 6f60ba2794bcf45adc8bb6509a0c4cc0 308 Hamap MF_00201 DNA repair protein RecO [recO]. 70 305 21.084 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RBRH_RS03385 6f60ba2794bcf45adc8bb6509a0c4cc0 308 Pfam PF11967 Recombination protein O N terminal 73 146 6.4E-24 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal RBRH_RS03385 6f60ba2794bcf45adc8bb6509a0c4cc0 308 Gene3D G3DSA:2.40.50.140 70 148 4.0E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS03385 6f60ba2794bcf45adc8bb6509a0c4cc0 308 SUPERFAMILY SSF57863 154 218 2.09E-7 T 23-04-2016 RBRH_RS08470 76992c8e4372d894ae8a2f85c31c287b 282 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 274 15.172 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RBRH_RS08470 76992c8e4372d894ae8a2f85c31c287b 282 PANTHER PTHR30622 1 282 1.0E-63 T 23-04-2016 RBRH_RS08470 76992c8e4372d894ae8a2f85c31c287b 282 Pfam PF02673 Bacitracin resistance protein BacA 7 268 1.8E-64 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RBRH_RS04060 93f00b6b4b08557cae3cf93770d2b249 96 Pfam PF13560 Helix-turn-helix domain 38 77 2.0E-6 T 23-04-2016 RBRH_RS04060 93f00b6b4b08557cae3cf93770d2b249 96 SUPERFAMILY SSF47413 37 84 2.39E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS04060 93f00b6b4b08557cae3cf93770d2b249 96 PANTHER PTHR36511 1 94 2.4E-18 T 23-04-2016 RBRH_RS04060 93f00b6b4b08557cae3cf93770d2b249 96 SMART SM00530 36 90 0.0017 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RBRH_RS04060 93f00b6b4b08557cae3cf93770d2b249 96 Gene3D G3DSA:1.10.260.40 36 91 5.6E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 SUPERFAMILY SSF51161 31 336 1.07E-82 T 23-04-2016 IPR011004 Trimeric LpxA-like RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 275 303 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 142 170 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 Gene3D G3DSA:2.160.10.10 152 329 1.4E-41 T 23-04-2016 RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 Gene3D G3DSA:2.160.10.10 112 151 8.7E-11 T 23-04-2016 RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 98 5.7E-23 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 PANTHER PTHR22572 111 315 4.7E-50 T 23-04-2016 RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 PANTHER PTHR22572:SF117 111 315 4.7E-50 T 23-04-2016 RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 349 1.9E-112 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 242 277 5.5E-8 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 157 191 3.3E-8 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 278 312 0.002 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 143 1.3E-5 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS06490 e168e7b3c698872b99bd0df0a072bbe1 371 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 4 346 38.49 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 Gene3D G3DSA:1.10.8.60 320 390 7.3E-20 T 23-04-2016 RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 SUPERFAMILY SSF52172 23 191 3.18E-6 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 Pfam PF02954 Bacterial regulatory protein, Fis family 408 442 2.3E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 Gene3D G3DSA:3.40.50.300 145 319 3.1E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 Gene3D G3DSA:1.10.10.60 410 442 1.4E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 PANTHER PTHR32071 23 442 5.7E-136 T 23-04-2016 RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.2E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.2E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 SMART SM00382 167 310 2.9E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 Pfam PF00158 Sigma-54 interaction domain 147 313 1.0E-66 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 SUPERFAMILY SSF46689 407 444 1.7E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS04880 bdf0b1c3f0fdfc923b6069b5abf3e907 454 SUPERFAMILY SSF52540 147 388 3.61E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 PANTHER PTHR21234:SF11 264 501 5.1E-115 T 23-04-2016 RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 PANTHER PTHR21234:SF11 187 232 5.1E-115 T 23-04-2016 RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 SUPERFAMILY SSF53167 17 501 2.71E-149 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 PANTHER PTHR21234 264 501 5.1E-115 T 23-04-2016 IPR018017 Nucleoside phosphorylase RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 PANTHER PTHR21234 187 232 5.1E-115 T 23-04-2016 IPR018017 Nucleoside phosphorylase RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 20 174 1.7E-55 T 23-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 Hamap MF_01932 AMP nucleosidase [amn]. 11 501 64.42 T 23-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 Pfam PF01048 Phosphorylase superfamily 279 446 1.8E-14 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 19 501 2.4E-204 T 23-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 Gene3D G3DSA:3.40.50.1580 181 482 1.8E-113 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RBRH_RS03810 7c431099b04c4a41006dd02369a6703c 501 Gene3D G3DSA:3.30.1730.10 12 177 2.3E-62 T 23-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 PIRSF PIRSF000194 1 165 2.4E-58 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 23-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 PRINTS PR00070 Dihydrofolate reductase signature 15 25 1.5E-13 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 PRINTS PR00070 Dihydrofolate reductase signature 95 109 1.5E-13 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 PRINTS PR00070 Dihydrofolate reductase signature 42 53 1.5E-13 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 PRINTS PR00070 Dihydrofolate reductase signature 29 37 1.5E-13 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 PANTHER PTHR22778:SF16 1 163 8.8E-37 T 23-04-2016 RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 PANTHER PTHR22778 1 163 8.8E-37 T 23-04-2016 RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 SUPERFAMILY SSF53597 3 164 2.72E-52 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 Gene3D G3DSA:3.40.430.10 2 164 8.8E-56 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain RBRH_RS03140 f591d636d7fca3af723fbbb10cf342b0 165 Pfam PF00186 Dihydrofolate reductase 4 163 7.8E-54 T 23-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 SUPERFAMILY SSF55124 252 276 9.6E-24 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 PANTHER PTHR11493:SF47 1 294 1.3E-152 T 23-04-2016 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 PANTHER PTHR11493:SF47 327 558 1.3E-152 T 23-04-2016 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 333 402 1.1E-13 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 50 110 2.7E-14 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 SUPERFAMILY SSF56014 413 554 1.15E-41 T 23-04-2016 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 SUPERFAMILY SSF56014 120 285 1.03E-46 T 23-04-2016 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 PANTHER PTHR11493 1 294 1.3E-152 T 23-04-2016 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 PANTHER PTHR11493 327 558 1.3E-152 T 23-04-2016 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 273 4.9E-39 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 415 551 1.1E-12 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 PRINTS PR00397 Sirohaem Fe-binding site signature 460 478 3.18E-5 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 PRINTS PR00397 Sirohaem Fe-binding site signature 414 432 3.18E-5 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 Gene3D G3DSA:3.30.413.10 412 552 2.8E-38 T 23-04-2016 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 SUPERFAMILY SSF55124 1 126 2.62E-29 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 Gene3D G3DSA:3.90.480.10 321 404 6.4E-34 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 Gene3D G3DSA:3.90.480.10 48 117 6.4E-34 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 Gene3D G3DSA:3.30.413.10 120 277 1.3E-41 T 23-04-2016 RBRH_RS02400 eb58b25da799bd20cc27cb06ba6e9dce 560 SUPERFAMILY SSF55124 315 425 9.6E-24 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 Hamap MF_01694 Biotin synthase [bioB]. 12 329 37.946 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 Gene3D G3DSA:3.20.20.70 22 328 1.1E-86 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 PANTHER PTHR22976:SF1 22 328 1.1E-124 T 23-04-2016 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 SUPERFAMILY SSF102114 20 327 5.23E-81 T 23-04-2016 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 SMART SM00729 59 268 2.1E-32 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 236 304 4.4E-10 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 SMART SM00876 236 328 2.6E-28 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 PANTHER PTHR22976 22 328 1.1E-124 T 23-04-2016 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 TIGRFAM TIGR00433 bioB: biotin synthase 30 326 2.6E-104 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 PIRSF PIRSF001619 4 329 1.4E-112 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RBRH_RS11540 fb595e5aee21075b77e361a875fd9c87 329 Pfam PF04055 Radical SAM superfamily 65 219 3.0E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS08970 5371ca84dbe214fa7f3721d7d6d601ca 216 SUPERFAMILY SSF53448 14 209 3.67E-28 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS08970 5371ca84dbe214fa7f3721d7d6d601ca 216 PANTHER PTHR40392:SF1 12 201 1.7E-33 T 23-04-2016 RBRH_RS08970 5371ca84dbe214fa7f3721d7d6d601ca 216 Pfam PF01983 Guanylyl transferase CofC like 15 201 2.7E-21 T 23-04-2016 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198|UniPathway: UPA00071 RBRH_RS08970 5371ca84dbe214fa7f3721d7d6d601ca 216 TIGRFAM TIGR03552 F420_cofC: 2-phospho-L-lactate guanylyltransferase 15 206 2.7E-40 T 23-04-2016 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198|UniPathway: UPA00071 RBRH_RS08970 5371ca84dbe214fa7f3721d7d6d601ca 216 PANTHER PTHR40392 12 201 1.7E-33 T 23-04-2016 RBRH_RS08970 5371ca84dbe214fa7f3721d7d6d601ca 216 Gene3D G3DSA:3.90.550.10 13 185 3.4E-33 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS10500 fc4ee9d9c6391a2f394b70eadb30bc04 286 PANTHER PTHR32552 19 268 1.1E-122 T 23-04-2016 RBRH_RS10500 fc4ee9d9c6391a2f394b70eadb30bc04 286 SUPERFAMILY SSF53098 111 275 2.66E-44 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS10500 fc4ee9d9c6391a2f394b70eadb30bc04 286 Pfam PF13276 HTH-like domain 45 100 4.3E-13 T 23-04-2016 IPR025948 HTH-like domain RBRH_RS10500 fc4ee9d9c6391a2f394b70eadb30bc04 286 Gene3D G3DSA:3.30.420.10 111 266 3.3E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS10500 fc4ee9d9c6391a2f394b70eadb30bc04 286 PANTHER PTHR32552:SF35 19 268 1.1E-122 T 23-04-2016 RBRH_RS10500 fc4ee9d9c6391a2f394b70eadb30bc04 286 Pfam PF13683 Integrase core domain 199 265 3.7E-33 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 Gene3D G3DSA:3.40.50.720 197 317 1.6E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 SUPERFAMILY SSF50129 10 200 1.51E-58 T 23-04-2016 IPR011032 GroES-like RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 PANTHER PTHR11695 22 113 3.4E-130 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 PANTHER PTHR11695 134 372 3.4E-130 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 Gene3D G3DSA:3.90.180.10 7 196 4.0E-54 T 23-04-2016 IPR011032 GroES-like RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 SMART SM00829 17 367 1.2E-5 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 Pfam PF00107 Zinc-binding dehydrogenase 204 331 1.4E-27 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 SUPERFAMILY SSF51735 167 339 1.21E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 PANTHER PTHR11695:SF571 22 113 3.4E-130 T 23-04-2016 RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 PANTHER PTHR11695:SF571 134 372 3.4E-130 T 23-04-2016 RBRH_RS06640 ae574fd58ff2cc2dc23ef3cc3c464685 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 161 4.0E-26 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RBRH_RS03085 8a0d2d3c0512b8e904d6070911de9da5 257 Gene3D G3DSA:1.10.1270.20 170 252 4.3E-32 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RBRH_RS03085 8a0d2d3c0512b8e904d6070911de9da5 257 SUPERFAMILY SSF75217 1 241 1.9E-93 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RBRH_RS03085 8a0d2d3c0512b8e904d6070911de9da5 257 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 237 6.0E-87 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RBRH_RS03085 8a0d2d3c0512b8e904d6070911de9da5 257 PANTHER PTHR32125 1 236 4.0E-101 T 23-04-2016 RBRH_RS03085 8a0d2d3c0512b8e904d6070911de9da5 257 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 229 4.7E-55 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RBRH_RS03085 8a0d2d3c0512b8e904d6070911de9da5 257 Gene3D G3DSA:3.40.1280.10 1 168 5.4E-59 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RBRH_RS03085 8a0d2d3c0512b8e904d6070911de9da5 257 PIRSF PIRSF000386 1 256 6.4E-88 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RBRH_RS03085 8a0d2d3c0512b8e904d6070911de9da5 257 PANTHER PTHR32125:SF1 1 236 4.0E-101 T 23-04-2016 RBRH_RS03085 8a0d2d3c0512b8e904d6070911de9da5 257 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 257 106.476 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RBRH_RS04505 e83659a8a929b5c5584c50814f9f0a54 38 PANTHER PTHR18804 1 38 2.3E-17 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04505 e83659a8a929b5c5584c50814f9f0a54 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 38 3.0E-9 T 23-04-2016 RBRH_RS04505 e83659a8a929b5c5584c50814f9f0a54 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04505 e83659a8a929b5c5584c50814f9f0a54 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 1.9E-19 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04505 e83659a8a929b5c5584c50814f9f0a54 38 SUPERFAMILY SSF57840 1 38 6.8E-16 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04505 e83659a8a929b5c5584c50814f9f0a54 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.547 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04505 e83659a8a929b5c5584c50814f9f0a54 38 Pfam PF00444 Ribosomal protein L36 1 38 2.9E-18 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 PIRSF PIRSF000429 1 400 5.1E-131 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 PANTHER PTHR18919 1 400 7.7E-231 T 23-04-2016 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 Gene3D G3DSA:3.40.47.10 200 281 9.6E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 Gene3D G3DSA:3.40.47.10 4 125 9.6E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 1.8E-216 T 23-04-2016 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 SUPERFAMILY SSF53901 277 399 1.03E-43 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 8.8E-134 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 Pfam PF00108 Thiolase, N-terminal domain 5 267 3.3E-76 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 1.5E-42 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 Gene3D G3DSA:3.40.47.10 153 199 7.2E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 Gene3D G3DSA:3.40.47.10 282 399 7.2E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 PANTHER PTHR18919:SF91 1 400 7.7E-231 T 23-04-2016 RBRH_RS05105 148b8e112edd05b3b223bddb2cc09610 400 SUPERFAMILY SSF53901 4 275 3.26E-80 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS00950 4949f6f5f169c5bff5bd77bb5b074745 272 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 35 263 2.5E-82 T 23-04-2016 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 RBRH_RS00950 4949f6f5f169c5bff5bd77bb5b074745 272 PANTHER PTHR11104 1 262 7.3E-82 T 23-04-2016 RBRH_RS00950 4949f6f5f169c5bff5bd77bb5b074745 272 SUPERFAMILY SSF110710 9 265 3.92E-90 T 23-04-2016 RBRH_RS01590 0f6e4ade691d231d749a79b9b57a7f3f 251 PIRSF PIRSF015601 5 251 1.4E-53 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS01590 0f6e4ade691d231d749a79b9b57a7f3f 251 Pfam PF04452 RNA methyltransferase 23 245 4.5E-62 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS01590 0f6e4ade691d231d749a79b9b57a7f3f 251 PANTHER PTHR30027:SF3 7 251 4.9E-72 T 23-04-2016 RBRH_RS01590 0f6e4ade691d231d749a79b9b57a7f3f 251 Gene3D G3DSA:2.40.240.20 7 71 5.3E-22 T 23-04-2016 RBRH_RS01590 0f6e4ade691d231d749a79b9b57a7f3f 251 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 21 247 2.2E-49 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS01590 0f6e4ade691d231d749a79b9b57a7f3f 251 PANTHER PTHR30027 7 251 4.9E-72 T 23-04-2016 RBRH_RS01590 0f6e4ade691d231d749a79b9b57a7f3f 251 SUPERFAMILY SSF75217 75 251 1.79E-48 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RBRH_RS01590 0f6e4ade691d231d749a79b9b57a7f3f 251 SUPERFAMILY SSF88697 7 69 7.46E-14 T 23-04-2016 IPR015947 PUA-like domain RBRH_RS01590 0f6e4ade691d231d749a79b9b57a7f3f 251 Gene3D G3DSA:3.40.1280.10 77 251 5.9E-57 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RBRH_RS06680 9c64dffb9e4790d86103e774f46a375c 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.4E-27 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS06680 9c64dffb9e4790d86103e774f46a375c 67 Gene3D G3DSA:2.40.50.140 1 65 2.5E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06680 9c64dffb9e4790d86103e774f46a375c 67 PIRSF PIRSF002599 1 67 1.2E-22 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 RBRH_RS06680 9c64dffb9e4790d86103e774f46a375c 67 PANTHER PTHR11544 1 67 2.3E-31 T 23-04-2016 RBRH_RS06680 9c64dffb9e4790d86103e774f46a375c 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site RBRH_RS06680 9c64dffb9e4790d86103e774f46a375c 67 SUPERFAMILY SSF50249 2 66 7.1E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS06680 9c64dffb9e4790d86103e774f46a375c 67 SMART SM00357 3 67 3.8E-28 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RBRH_RS06680 9c64dffb9e4790d86103e774f46a375c 67 PRINTS PR00050 Cold shock protein signature 40 58 1.07E-13 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS06680 9c64dffb9e4790d86103e774f46a375c 67 PRINTS PR00050 Cold shock protein signature 25 34 1.07E-13 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS06680 9c64dffb9e4790d86103e774f46a375c 67 PRINTS PR00050 Cold shock protein signature 4 19 1.07E-13 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 336 417 2.7E-30 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 Pfam PF10531 SLBB domain 248 294 8.5E-12 T 23-04-2016 IPR019554 Soluble ligand binding domain RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 SUPERFAMILY SSF140490 329 426 1.12E-37 T 23-04-2016 RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 53 224 1.1E-46 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 SUPERFAMILY SSF142984 246 327 7.45E-23 T 23-04-2016 RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 SMART SM00928 332 377 8.0E-25 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 345 356 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 PANTHER PTHR11780 20 426 8.5E-209 T 23-04-2016 RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 SUPERFAMILY SSF142019 17 245 1.83E-82 T 23-04-2016 RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 418 5.3E-188 T 23-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 RBRH_RS09055 4aaef19c5f68515a2109ada016025a49 441 PANTHER PTHR11780:SF10 20 426 8.5E-209 T 23-04-2016 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 Pfam PF08264 Anticodon-binding domain of tRNA 672 828 9.3E-39 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 SUPERFAMILY SSF47323 632 901 1.18E-60 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 952 15.655 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 933 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 24 620 1.2E-203 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PANTHER PTHR11946 598 861 0.0 T 23-04-2016 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PANTHER PTHR11946 1 560 0.0 T 23-04-2016 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PANTHER PTHR11946 883 945 0.0 T 23-04-2016 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 Gene3D G3DSA:3.90.740.10 200 343 1.3E-49 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 887 951 3.2E-19 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 Gene3D G3DSA:1.10.287.380 882 951 4.0E-5 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 Gene3D G3DSA:3.40.50.620 10 199 1.2E-138 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 Gene3D G3DSA:3.40.50.620 347 561 1.2E-138 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 Gene3D G3DSA:3.40.50.620 599 620 1.2E-138 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 Gene3D G3DSA:1.10.730.10 621 821 1.5E-61 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 SUPERFAMILY SSF52374 347 561 6.14E-132 T 23-04-2016 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 SUPERFAMILY SSF52374 7 198 6.14E-132 T 23-04-2016 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 SUPERFAMILY SSF52374 599 631 6.14E-132 T 23-04-2016 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PANTHER PTHR11946:SF5 598 861 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PANTHER PTHR11946:SF5 1 560 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PANTHER PTHR11946:SF5 883 945 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 SUPERFAMILY SSF46589 887 951 5.18E-16 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 SUPERFAMILY SSF50677 197 348 3.53E-62 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PRINTS PR00986 Valyl-tRNA synthetase signature 496 514 4.7E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PRINTS PR00986 Valyl-tRNA synthetase signature 465 486 4.7E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 4.7E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 4.7E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RBRH_RS03785 a03f76bf83ea9398b909a88931ba9623 953 PRINTS PR00986 Valyl-tRNA synthetase signature 352 365 4.7E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RBRH_RS02220 39a20a03518d98a8f8692b2cadc162c7 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 89 180 6.8E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RBRH_RS02220 39a20a03518d98a8f8692b2cadc162c7 714 Gene3D G3DSA:2.40.170.20 180 713 2.5E-72 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RBRH_RS02220 39a20a03518d98a8f8692b2cadc162c7 714 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 81 713 7.1E-246 T 23-04-2016 IPR010100 TonB-dependent copper receptor RBRH_RS02220 39a20a03518d98a8f8692b2cadc162c7 714 PANTHER PTHR32552 27 714 1.7E-205 T 23-04-2016 RBRH_RS02220 39a20a03518d98a8f8692b2cadc162c7 714 Gene3D G3DSA:2.170.130.10 93 179 2.0E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RBRH_RS02220 39a20a03518d98a8f8692b2cadc162c7 714 Pfam PF00593 TonB dependent receptor 456 713 3.1E-27 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RBRH_RS02220 39a20a03518d98a8f8692b2cadc162c7 714 PANTHER PTHR32552:SF12 27 714 1.7E-205 T 23-04-2016 RBRH_RS02220 39a20a03518d98a8f8692b2cadc162c7 714 SUPERFAMILY SSF56935 78 712 1.95E-88 T 23-04-2016 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 SUPERFAMILY SSF52156 754 883 2.48E-37 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 974 17.608 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 Gene3D G3DSA:2.40.30.10 878 974 8.8E-39 T 23-04-2016 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 SUPERFAMILY SSF52540 473 645 3.26E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 SUPERFAMILY SSF46955 4 51 5.68E-10 T 23-04-2016 IPR009061 Putative DNA-binding domain RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 Gene3D G3DSA:3.40.50.10050 777 855 2.1E-25 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 Gene3D G3DSA:2.40.30.10 648 741 3.9E-23 T 23-04-2016 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 Pfam PF11987 Translation-initiation factor 2 762 866 4.5E-37 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 Gene3D G3DSA:3.40.50.300 477 635 3.8E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 479 635 3.1E-33 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 395 976 1.4E-264 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 SUPERFAMILY SSF50447 649 731 1.57E-23 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 2.0E-14 T 23-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 400 450 5.5E-14 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 Pfam PF00009 Elongation factor Tu GTP binding domain 481 636 1.9E-34 T 23-04-2016 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 ProSitePatterns PS01176 Initiation factor 2 signature. 927 949 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 Gene3D G3DSA:3.30.56.50 3 51 9.9E-18 T 23-04-2016 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 PANTHER PTHR23115:SF184 829 974 3.6E-205 T 23-04-2016 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 PANTHER PTHR23115:SF184 458 804 3.6E-205 T 23-04-2016 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 SUPERFAMILY SSF50447 878 974 1.96E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 PANTHER PTHR23115 829 974 3.6E-205 T 23-04-2016 RBRH_RS06205 f1627f52d85a0f32c0a0185c86b0e715 976 PANTHER PTHR23115 458 804 3.6E-205 T 23-04-2016 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 SMART SM00278 108 127 0.0016 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 SMART SM00278 73 92 2.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 Gene3D G3DSA:2.40.50.140 1 65 2.9E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 Pfam PF01330 RuvA N terminal domain 1 62 4.2E-21 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 SUPERFAMILY SSF50249 1 63 9.14E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 Pfam PF14520 Helix-hairpin-helix domain 72 129 5.5E-19 T 23-04-2016 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 Gene3D G3DSA:1.10.150.20 67 134 9.4E-30 T 23-04-2016 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 Gene3D G3DSA:1.10.8.10 151 190 5.2E-7 T 23-04-2016 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 SUPERFAMILY SSF46929 147 192 7.72E-9 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 Pfam PF07499 RuvA, C-terminal domain 148 191 1.1E-12 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 31.342 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 188 5.4E-53 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 SUPERFAMILY SSF47781 66 133 1.17E-21 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RBRH_RS10665 6cdfd0985c62d9744a66955891635e25 193 PANTHER PTHR33796 2 193 8.3E-74 T 23-04-2016 RBRH_RS13200 2b505c6f1b6044689eea9773bf39a32e 206 Gene3D G3DSA:3.40.50.720 2 33 1.8E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS13200 2b505c6f1b6044689eea9773bf39a32e 206 PANTHER PTHR23135 1 201 8.5E-86 T 23-04-2016 RBRH_RS13200 2b505c6f1b6044689eea9773bf39a32e 206 SUPERFAMILY SSF53623 32 204 9.03E-56 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS13200 2b505c6f1b6044689eea9773bf39a32e 206 SUPERFAMILY SSF51984 2 33 4.32E-6 T 23-04-2016 RBRH_RS13200 2b505c6f1b6044689eea9773bf39a32e 206 Pfam PF08245 Mur ligase middle domain 51 202 1.7E-19 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS13200 2b505c6f1b6044689eea9773bf39a32e 206 Pfam PF01225 Mur ligase family, catalytic domain 6 46 1.9E-6 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS13200 2b505c6f1b6044689eea9773bf39a32e 206 PANTHER PTHR23135:SF5 1 201 8.5E-86 T 23-04-2016 RBRH_RS13200 2b505c6f1b6044689eea9773bf39a32e 206 Gene3D G3DSA:3.40.1190.10 35 204 3.3E-62 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 Gene3D G3DSA:3.40.50.300 150 333 5.3E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 591 8.8E-233 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 SUPERFAMILY SSF52540 149 393 1.49E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 Gene3D G3DSA:1.10.8.60 334 407 6.2E-29 T 23-04-2016 RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 PANTHER PTHR23076 5 601 0.0 T 23-04-2016 RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 606 37.109 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 SMART SM00382 186 325 1.3E-26 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 Pfam PF01434 Peptidase family M41 384 590 1.1E-77 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 Pfam PF06480 FtsH Extracellular 11 78 7.2E-8 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 3.0E-46 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 Gene3D G3DSA:3.40.50.300 441 451 2.1E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 Gene3D G3DSA:3.40.50.300 506 573 2.1E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03615 0fab2c6eb58b07a1461667c9d017cb2c 630 SUPERFAMILY SSF140990 404 601 4.45E-73 T 23-04-2016 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 12 295 1.6E-108 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 PIRSF PIRSF001365 5 300 7.4E-96 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 PANTHER PTHR12128:SF34 1 298 2.9E-131 T 23-04-2016 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 SMART SM01130 9 297 1.5E-143 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 9 295 66.336 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 Gene3D G3DSA:3.20.20.70 7 298 1.9E-118 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 141 171 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 PANTHER PTHR12128 1 298 2.9E-131 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 111 127 1.2E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 43 64 1.2E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 79 97 1.2E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 136 153 1.2E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 SUPERFAMILY SSF51569 5 297 2.41E-104 T 23-04-2016 RBRH_RS08135 f74e639f90207443b06e9dab31fc3546 300 Pfam PF00701 Dihydrodipicolinate synthetase family 11 294 3.3E-102 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 PANTHER PTHR30203 8 489 4.7E-155 T 23-04-2016 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 PANTHER PTHR30203:SF15 8 489 4.7E-155 T 23-04-2016 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 SUPERFAMILY SSF56954 63 473 1.22E-115 T 23-04-2016 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 SUPERFAMILY SSF56954 2 29 1.22E-115 T 23-04-2016 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 Gene3D G3DSA:2.20.200.10 108 147 1.7E-21 T 23-04-2016 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 Gene3D G3DSA:2.20.200.10 321 356 1.7E-21 T 23-04-2016 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 471 9.0E-128 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 Pfam PF02321 Outer membrane efflux protein 72 260 4.9E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 Pfam PF02321 Outer membrane efflux protein 288 469 2.1E-31 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 Gene3D G3DSA:1.20.1600.10 148 320 7.9E-108 T 23-04-2016 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 Gene3D G3DSA:1.20.1600.10 60 98 7.9E-108 T 23-04-2016 RBRH_RS10120 9959f70e5154a9382d9739915693b9a2 503 Gene3D G3DSA:1.20.1600.10 358 472 7.9E-108 T 23-04-2016 RBRH_RS00725 da99055ddfea204e34b0a9956dd6ff07 253 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 64 186 3.1E-9 T 23-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 Gene3D G3DSA:2.40.10.10 185 291 1.4E-44 T 23-04-2016 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 PRINTS PR00834 HtrA/DegQ protease family signature 150 170 2.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 PRINTS PR00834 HtrA/DegQ protease family signature 129 141 2.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 PRINTS PR00834 HtrA/DegQ protease family signature 330 342 2.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 2.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 PRINTS PR00834 HtrA/DegQ protease family signature 190 214 2.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 2.2E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 Gene3D G3DSA:2.30.42.10 406 498 7.0E-19 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 Gene3D G3DSA:2.30.42.10 292 388 2.8E-27 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 SUPERFAMILY SSF50494 35 281 1.48E-66 T 23-04-2016 IPR009003 Peptidase S1, PA clan RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 36 488 2.8E-154 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 SUPERFAMILY SSF50156 248 373 7.76E-22 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 Pfam PF13180 PDZ domain 312 380 1.6E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 Pfam PF13180 PDZ domain 407 490 7.3E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 PANTHER PTHR22939 32 58 1.8E-122 T 23-04-2016 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 PANTHER PTHR22939 91 385 1.8E-122 T 23-04-2016 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 SUPERFAMILY SSF50156 406 493 2.89E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 Pfam PF13365 Trypsin-like peptidase domain 120 251 2.7E-35 T 23-04-2016 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 Gene3D G3DSA:2.40.10.10 29 56 2.6E-37 T 23-04-2016 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 Gene3D G3DSA:2.40.10.10 107 184 2.6E-37 T 23-04-2016 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 PANTHER PTHR22939:SF98 32 58 1.8E-122 T 23-04-2016 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 PANTHER PTHR22939:SF98 91 385 1.8E-122 T 23-04-2016 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 SMART SM00228 305 372 6.1E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS03355 395e242b56a85f73cda10820174511bf 499 SMART SM00228 405 483 2.2E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 Pfam PF04545 Sigma-70, region 4 614 667 3.1E-19 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 Pfam PF04546 Sigma-70, non-essential region 199 415 1.9E-68 T 23-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 Gene3D G3DSA:1.10.601.10 172 515 4.8E-130 T 23-04-2016 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 639 665 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 Pfam PF03979 Sigma-70 factor, region 1.1 62 141 1.5E-27 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 SUPERFAMILY SSF88659 519 593 2.62E-18 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 Gene3D G3DSA:1.10.10.10 519 570 1.9E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 442 678 5.4E-119 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 Pfam PF04539 Sigma-70 region 3 525 601 6.1E-25 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 470 483 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 PANTHER PTHR30603:SF0 393 679 1.9E-223 T 23-04-2016 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 PANTHER PTHR30603:SF0 57 212 1.9E-223 T 23-04-2016 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 SUPERFAMILY SSF88659 576 677 4.67E-28 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 SUPERFAMILY SSF88946 175 513 2.67E-101 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 Pfam PF04542 Sigma-70 region 2 448 515 7.4E-21 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 442 667 2.9E-39 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 PANTHER PTHR30603 393 679 1.9E-223 T 23-04-2016 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 PANTHER PTHR30603 57 212 1.9E-223 T 23-04-2016 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 62 679 42.972 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 Gene3D G3DSA:1.10.10.10 609 679 3.9E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 Pfam PF00140 Sigma-70 factor, region 1.2 158 190 1.0E-13 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 PRINTS PR00046 Major sigma-70 factor signature 618 630 4.8E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 PRINTS PR00046 Major sigma-70 factor signature 470 483 4.8E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 PRINTS PR00046 Major sigma-70 factor signature 639 654 4.8E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 PRINTS PR00046 Major sigma-70 factor signature 654 665 4.8E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04195 8de3fee5fa27edbd6379ecc49eef5337 681 PRINTS PR00046 Major sigma-70 factor signature 494 502 4.8E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 PRINTS PR00340 P-II protein signature 23 41 6.6E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 PRINTS PR00340 P-II protein signature 2 17 6.6E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 PRINTS PR00340 P-II protein signature 52 75 6.6E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 PRINTS PR00340 P-II protein signature 83 103 6.6E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 PIRSF PIRSF039144 1 112 2.4E-55 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 Gene3D G3DSA:3.30.70.120 1 112 2.2E-49 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.2E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 PANTHER PTHR30115:SF12 1 112 9.0E-68 T 23-04-2016 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 SUPERFAMILY SSF54913 1 112 5.72E-45 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 SMART SM00938 4 105 3.3E-65 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS02645 02f1e95a17ccceb84133e493ac313122 112 PANTHER PTHR30115 1 112 9.0E-68 T 23-04-2016 RBRH_RS10360 f8a712676dc2a85300ef19ab71962776 251 PANTHER PTHR33751:SF2 15 225 2.5E-75 T 23-04-2016 RBRH_RS10360 f8a712676dc2a85300ef19ab71962776 251 PIRSF PIRSF000005 4 220 9.0E-68 T 23-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 RBRH_RS10360 f8a712676dc2a85300ef19ab71962776 251 Gene3D G3DSA:1.10.760.10 136 216 2.5E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10360 f8a712676dc2a85300ef19ab71962776 251 Gene3D G3DSA:1.10.760.10 41 114 3.3E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10360 f8a712676dc2a85300ef19ab71962776 251 SUPERFAMILY SSF46626 46 118 6.52E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10360 f8a712676dc2a85300ef19ab71962776 251 SUPERFAMILY SSF46626 127 216 5.96E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10360 f8a712676dc2a85300ef19ab71962776 251 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 46 110 8.1E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10360 f8a712676dc2a85300ef19ab71962776 251 Pfam PF00034 Cytochrome c 132 216 1.6E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10360 f8a712676dc2a85300ef19ab71962776 251 PANTHER PTHR33751 15 225 2.5E-75 T 23-04-2016 RBRH_RS09940 f691970a9bf73ba0b1d214cf266064c7 183 PANTHER PTHR21047:SF2 1 180 2.0E-73 T 23-04-2016 RBRH_RS09940 f691970a9bf73ba0b1d214cf266064c7 183 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 180 2.7E-81 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RBRH_RS09940 f691970a9bf73ba0b1d214cf266064c7 183 Gene3D G3DSA:2.60.120.10 4 180 3.4E-79 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RBRH_RS09940 f691970a9bf73ba0b1d214cf266064c7 183 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 177 6.9E-71 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RBRH_RS09940 f691970a9bf73ba0b1d214cf266064c7 183 PANTHER PTHR21047 1 180 2.0E-73 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RBRH_RS09940 f691970a9bf73ba0b1d214cf266064c7 183 SUPERFAMILY SSF51182 2 181 9.49E-76 T 23-04-2016 IPR011051 RmlC-like cupin domain RBRH_RS09940 f691970a9bf73ba0b1d214cf266064c7 183 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 4 182 3.0E-78 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RBRH_RS10105 ff95352600cd91a6ae9b73af5c6acad4 297 PANTHER PTHR24220 7 236 1.1E-63 T 23-04-2016 RBRH_RS10105 ff95352600cd91a6ae9b73af5c6acad4 297 Gene3D G3DSA:3.40.50.300 2 229 4.3E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10105 ff95352600cd91a6ae9b73af5c6acad4 297 Pfam PF00005 ABC transporter 21 166 3.3E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS10105 ff95352600cd91a6ae9b73af5c6acad4 297 SUPERFAMILY SSF52540 4 229 9.87E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10105 ff95352600cd91a6ae9b73af5c6acad4 297 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS10105 ff95352600cd91a6ae9b73af5c6acad4 297 SMART SM00382 30 216 1.1E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 PANTHER PTHR33121:SF13 452 781 5.1E-86 T 23-04-2016 RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 SUPERFAMILY SSF141868 510 759 3.79E-85 T 23-04-2016 IPR001633 EAL domain RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 SMART SM00052 505 751 1.2E-105 T 23-04-2016 IPR001633 EAL domain RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 Gene3D G3DSA:3.30.450.20 117 185 1.1E-9 T 23-04-2016 RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 SMART SM00267 324 495 8.9E-46 T 23-04-2016 IPR000160 GGDEF domain RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 490 3.2E-38 T 23-04-2016 IPR000160 GGDEF domain RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 Gene3D G3DSA:3.30.450.20 186 296 1.0E-5 T 23-04-2016 RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 SUPERFAMILY SSF55073 340 497 5.26E-42 T 23-04-2016 IPR029787 Nucleotide cyclase RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 Pfam PF00563 EAL domain 511 746 1.3E-68 T 23-04-2016 IPR001633 EAL domain RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 PANTHER PTHR33121 452 781 5.1E-86 T 23-04-2016 RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 Pfam PF02743 Cache domain 54 281 1.3E-13 T 23-04-2016 IPR033479 Double Cache domain 1 RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 Gene3D G3DSA:3.20.20.450 508 758 1.5E-93 T 23-04-2016 IPR001633 EAL domain RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 337 492 1.9E-35 T 23-04-2016 IPR000160 GGDEF domain RBRH_RS09520 7e744cc6d059d80d994262be8d396952 782 Gene3D G3DSA:3.30.70.270 337 501 3.0E-47 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF47336 4152 4224 3.4E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF52777 3371 3637 1.11E-64 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF52777 13 189 2.33E-30 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 PANTHER PTHR24095:SF173 632 1089 0.0 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 PANTHER PTHR24095:SF173 2106 4133 0.0 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF52777 2132 2308 4.56E-49 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.30.300.30 4045 4164 3.8E-40 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.30.300.30 854 973 5.1E-42 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.30.300.30 2987 3102 1.1E-41 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF52777 1081 1276 3.11E-30 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF47336 3092 3164 2.09E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00668 Condensation domain 10 278 2.1E-30 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00668 Condensation domain 3186 3484 2.7E-75 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00668 Condensation domain 1083 1376 1.6E-39 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00668 Condensation domain 2129 2427 1.9E-76 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00668 Condensation domain 4245 4415 2.0E-36 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF56801 1496 2057 1.26E-166 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF56801 3609 4173 4.58E-161 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2614 3016 1.6E-136 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 480 883 1.5E-136 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1558 1960 7.9E-138 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3671 4074 4.7E-135 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.40.50.980 1530 1685 8.4E-55 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.40.50.980 2586 2741 7.4E-55 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00550 Phosphopantetheine attachment site 2046 2108 5.6E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00550 Phosphopantetheine attachment site 4162 4224 1.3E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00550 Phosphopantetheine attachment site 971 1031 1.5E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00550 Phosphopantetheine attachment site 3103 3163 1.5E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF47336 961 1033 3.01E-18 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF52777 1265 1522 1.78E-45 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF47336 2036 2142 1.7E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF13193 AMP-binding enzyme C-terminal domain 4058 4133 4.9E-12 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF13193 AMP-binding enzyme C-terminal domain 1944 2017 3.8E-10 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF13193 AMP-binding enzyme C-terminal domain 867 942 1.0E-11 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF13193 AMP-binding enzyme C-terminal domain 3000 3073 2.2E-11 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3792 3803 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 ProSitePatterns PS00455 Putative AMP-binding domain signature. 601 612 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1679 1690 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2735 2746 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.40.50.980 2742 2902 4.6E-36 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.40.50.980 3802 3962 3.0E-40 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.40.50.980 611 771 4.0E-40 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.40.50.980 1686 1846 4.3E-35 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF52777 192 446 3.34E-30 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF56801 2553 3113 9.03E-164 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF52777 2314 2580 6.0E-66 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00501 AMP-binding enzyme 1537 1936 6.0E-102 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00501 AMP-binding enzyme 3650 4050 6.7E-99 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00501 AMP-binding enzyme 2593 2992 1.6E-101 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF00501 AMP-binding enzyme 459 859 1.5E-100 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:1.10.1200.10 974 1037 2.4E-25 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:1.10.1200.10 3103 3169 1.9E-28 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:1.10.1200.10 2031 2113 4.7E-28 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:1.10.1200.10 4165 4230 7.2E-27 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 ProSitePatterns PS00012 Phosphopantetheine attachment site. 993 1008 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF52777 3189 3365 8.67E-51 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.40.50.980 453 610 2.3E-59 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.40.50.980 3643 3801 2.2E-59 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:2.30.38.10 772 849 3.8E-30 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:2.30.38.10 3963 4040 1.1E-27 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:2.30.38.10 2903 2982 8.0E-31 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:2.30.38.10 1847 1926 2.7E-31 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF13745 HxxPF-repeated domain 2449 2538 6.0E-32 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Pfam PF13745 HxxPF-repeated domain 3506 3595 5.7E-31 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 PANTHER PTHR24095 632 1089 0.0 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 PANTHER PTHR24095 2106 4133 0.0 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF56801 418 982 6.02E-167 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SUPERFAMILY SSF52777 4248 4417 9.56E-45 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 Gene3D G3DSA:3.30.300.30 1930 2029 2.2E-37 T 23-04-2016 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SMART SM00823 Phosphopantetheine attachment site 3100 3168 9.4E-4 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SMART SM00823 Phosphopantetheine attachment site 2044 2112 0.0024 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SMART SM00823 Phosphopantetheine attachment site 969 1037 0.29 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08665 425f38dda86e689a7f372df36517ae58 4453 SMART SM00823 Phosphopantetheine attachment site 4160 4228 9.4E-4 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS16105 7f21c71e1427d51bce3022b61f419683 638 SUPERFAMILY SSF88874 591 637 1.12E-22 T 23-04-2016 RBRH_RS16105 7f21c71e1427d51bce3022b61f419683 638 SUPERFAMILY SSF88874 415 546 1.12E-22 T 23-04-2016 RBRH_RS16105 7f21c71e1427d51bce3022b61f419683 638 Gene3D G3DSA:3.90.1340.10 416 498 3.3E-4 T 23-04-2016 IPR011083 Phage tail collar domain RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 Gene3D G3DSA:1.10.287.990 21 83 2.7E-25 T 23-04-2016 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 PIRSF PIRSF000349 1 194 1.0E-86 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 83 2.6E-33 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 PANTHER PTHR11404 2 192 1.2E-107 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 4.6E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 PRINTS PR01703 Manganese superoxide dismutase signature 66 79 4.6E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 4.6E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 4.6E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 PRINTS PR01703 Manganese superoxide dismutase signature 119 127 4.6E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 PANTHER PTHR11404:SF8 2 192 1.2E-107 T 23-04-2016 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 SUPERFAMILY SSF54719 83 192 1.44E-45 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 190 4.8E-41 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02180 fd4bcddd283ea8761ea1b3145ef351d3 194 SUPERFAMILY SSF46609 3 84 3.01E-35 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 PANTHER PTHR12815 6 767 2.1E-231 T 23-04-2016 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 30 767 9.6E-268 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 8 767 25.495 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 Pfam PF01103 Surface antigen 454 767 5.4E-74 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 Gene3D G3DSA:2.40.160.50 403 763 1.2E-28 T 23-04-2016 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 PANTHER PTHR12815:SF11 6 767 2.1E-231 T 23-04-2016 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 PIRSF PIRSF006076 2 767 1.2E-250 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 Pfam PF07244 Surface antigen variable number repeat 31 96 3.9E-5 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 Pfam PF07244 Surface antigen variable number repeat 182 269 9.1E-20 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 Pfam PF07244 Surface antigen variable number repeat 99 178 4.5E-12 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 Pfam PF07244 Surface antigen variable number repeat 353 427 7.4E-14 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RBRH_RS06480 ae1482d6361f4cd99ce7cb95d5f4b7b0 767 Pfam PF07244 Surface antigen variable number repeat 272 348 1.1E-13 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 Gene3D G3DSA:3.40.190.10 181 262 3.0E-23 T 23-04-2016 RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 SUPERFAMILY SSF46785 2 85 1.85E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 PANTHER PTHR30126:SF6 1 310 9.9E-131 T 23-04-2016 RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 Pfam PF03466 LysR substrate binding domain 89 293 1.4E-39 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 Gene3D G3DSA:3.40.190.10 91 180 4.6E-17 T 23-04-2016 RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 SUPERFAMILY SSF53850 91 300 2.17E-38 T 23-04-2016 RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 64 2.2E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 PANTHER PTHR30126 1 310 9.9E-131 T 23-04-2016 RBRH_RS02395 12f28255fe0fbcfabb1313c1aec9b49e 314 Gene3D G3DSA:1.10.10.10 1 81 4.2E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS09410 f6afd756d71fa307256247997373e7c1 317 ProSitePatterns PS00958 Transaldolase active site. 123 140 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RBRH_RS09410 f6afd756d71fa307256247997373e7c1 317 TIGRFAM TIGR00874 talAB: transaldolase 4 315 1.6E-138 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RBRH_RS09410 f6afd756d71fa307256247997373e7c1 317 Pfam PF00923 Transaldolase 14 312 4.1E-94 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RBRH_RS09410 f6afd756d71fa307256247997373e7c1 317 SUPERFAMILY SSF51569 1 315 3.98E-111 T 23-04-2016 RBRH_RS09410 f6afd756d71fa307256247997373e7c1 317 Hamap MF_00492 Transaldolase [tal]. 2 317 48.482 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RBRH_RS09410 f6afd756d71fa307256247997373e7c1 317 PANTHER PTHR10683 1 315 1.6E-177 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RBRH_RS09410 f6afd756d71fa307256247997373e7c1 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RBRH_RS09410 f6afd756d71fa307256247997373e7c1 317 PANTHER PTHR10683:SF18 1 315 1.6E-177 T 23-04-2016 RBRH_RS09410 f6afd756d71fa307256247997373e7c1 317 Gene3D G3DSA:3.20.20.70 2 315 7.2E-124 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 495 7.1E-218 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 Gene3D G3DSA:3.30.420.40 2 252 6.2E-103 T 23-04-2016 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 Gene3D G3DSA:3.30.420.40 254 497 2.3E-95 T 23-04-2016 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 251 8.8E-82 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 PANTHER PTHR10196:SF9 1 497 5.1E-238 T 23-04-2016 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 449 2.0E-59 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 Hamap MF_00186 Glycerol kinase [glpK]. 3 496 57.159 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 PANTHER PTHR10196 1 497 5.1E-238 T 23-04-2016 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 PIRSF PIRSF000538 3 500 1.8E-175 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 SUPERFAMILY SSF53067 5 254 2.07E-92 T 23-04-2016 RBRH_RS10405 1a00a56e324eb3c74755eb531ee3eadd 500 SUPERFAMILY SSF53067 253 495 1.17E-80 T 23-04-2016 RBRH_RS10190 985fbefc67cdf93c408d6ef2fedcaf53 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 1.1E-180 T 23-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 RBRH_RS10190 985fbefc67cdf93c408d6ef2fedcaf53 354 SUPERFAMILY SSF51569 3 329 1.03E-104 T 23-04-2016 RBRH_RS10190 985fbefc67cdf93c408d6ef2fedcaf53 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 3.0E-94 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RBRH_RS10190 985fbefc67cdf93c408d6ef2fedcaf53 354 Gene3D G3DSA:3.20.20.70 1 335 7.0E-110 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS10190 985fbefc67cdf93c408d6ef2fedcaf53 354 PIRSF PIRSF001359 1 329 4.5E-84 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RBRH_RS10190 985fbefc67cdf93c408d6ef2fedcaf53 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RBRH_RS10190 985fbefc67cdf93c408d6ef2fedcaf53 354 PANTHER PTHR30304 1 349 2.7E-120 T 23-04-2016 RBRH_RS10190 985fbefc67cdf93c408d6ef2fedcaf53 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RBRH_RS10190 985fbefc67cdf93c408d6ef2fedcaf53 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 6.6E-99 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RBRH_RS16295 5bb6a8305f94037c9617dde144a21758 262 PANTHER PTHR32294 1 233 1.9E-105 T 23-04-2016 RBRH_RS16295 5bb6a8305f94037c9617dde144a21758 262 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 2 63 6.5E-14 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS16295 5bb6a8305f94037c9617dde144a21758 262 Pfam PF14579 Helix-hairpin-helix motif 137 226 1.9E-23 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS16295 5bb6a8305f94037c9617dde144a21758 262 PANTHER PTHR32294:SF4 1 233 1.9E-105 T 23-04-2016 RBRH_RS00060 3d5e3bcba700b35e7821a9dc847fd664 579 Pfam PF13649 Methyltransferase domain 64 161 3.7E-14 T 23-04-2016 RBRH_RS00060 3d5e3bcba700b35e7821a9dc847fd664 579 PANTHER PTHR10108:SF829 45 174 1.4E-27 T 23-04-2016 RBRH_RS00060 3d5e3bcba700b35e7821a9dc847fd664 579 SUPERFAMILY SSF53335 25 185 1.31E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS00060 3d5e3bcba700b35e7821a9dc847fd664 579 Gene3D G3DSA:3.40.50.150 23 184 2.9E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS00060 3d5e3bcba700b35e7821a9dc847fd664 579 Pfam PF10119 Predicted methyltransferase regulatory domain 233 314 2.3E-20 T 23-04-2016 IPR018773 Methyltransferase regulatory domain, predicted RBRH_RS00060 3d5e3bcba700b35e7821a9dc847fd664 579 PANTHER PTHR10108 45 174 1.4E-27 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 PANTHER PTHR10617:SF103 1 288 1.4E-109 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 PANTHER PTHR10617:SF103 333 397 1.4E-109 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 Gene3D G3DSA:1.10.8.260 272 324 3.7E-8 T 23-04-2016 IPR023166 HI0933 insert-like domain RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 Gene3D G3DSA:2.40.30.10 188 271 1.8E-26 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 Gene3D G3DSA:3.50.50.60 342 397 1.5E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 Gene3D G3DSA:3.50.50.60 2 186 1.5E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 1.8E-5 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.8E-5 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.8E-5 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 Pfam PF03486 HI0933-like protein 5 395 3.8E-138 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 PANTHER PTHR10617 1 288 1.4E-109 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 PANTHER PTHR10617 333 397 1.4E-109 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 395 7.4E-120 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 SUPERFAMILY SSF51905 1 188 3.57E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 SUPERFAMILY SSF51905 340 397 3.57E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 SUPERFAMILY SSF160996 189 343 1.7E-39 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 1.6E-5 T 23-04-2016 RBRH_RS04175 1fcffbc47f3f1e34372c547dfffbab9c 404 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.6E-5 T 23-04-2016 RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 SUPERFAMILY SSF56024 115 310 2.7E-53 T 23-04-2016 RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 Pfam PF13091 PLD-like domain 322 447 1.4E-23 T 23-04-2016 IPR025202 Phospholipase D-like domain RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 Pfam PF13091 PLD-like domain 138 280 2.2E-12 T 23-04-2016 IPR025202 Phospholipase D-like domain RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 11 481 2.3E-109 T 23-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 Pfam PF13396 Phospholipase_D-nuclease N-terminal 19 59 1.0E-5 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 Hamap MF_00190 Cardiolipin synthase A [clsA]. 1 481 45.155 T 23-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 PANTHER PTHR21248:SF9 18 481 7.4E-151 T 23-04-2016 RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 Gene3D G3DSA:3.30.870.10 114 315 5.6E-48 T 23-04-2016 RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 Gene3D G3DSA:3.30.870.10 321 478 1.1E-35 T 23-04-2016 RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 SUPERFAMILY SSF56024 273 468 1.44E-46 T 23-04-2016 RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 SMART SM00155 220 247 7.7E-5 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 SMART SM00155 394 421 2.6E-4 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RBRH_RS06370 71aeb449162a0b31df21581de37b33c1 481 PANTHER PTHR21248 18 481 7.4E-151 T 23-04-2016 RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Gene3D G3DSA:4.10.860.10 643 684 5.5E-16 T 23-04-2016 IPR001943 UVR domain GO:0005515 RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Pfam PF04851 Type III restriction enzyme, res subunit 36 158 1.0E-9 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 25 679 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 SMART SM00490 479 565 1.1E-18 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 SUPERFAMILY SSF52540 478 608 1.09E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 SUPERFAMILY SSF52540 57 102 1.09E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 SUPERFAMILY SSF46600 637 682 7.32E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Gene3D G3DSA:3.30.2060.10 179 253 1.0E-10 T 23-04-2016 RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 PANTHER PTHR24029 19 683 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Gene3D G3DSA:3.40.50.300 439 601 4.0E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Gene3D G3DSA:3.40.50.300 27 109 1.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Gene3D G3DSA:3.40.50.300 298 358 1.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Gene3D G3DSA:3.40.50.300 408 429 1.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 SMART SM00487 29 445 5.3E-29 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Pfam PF00271 Helicase conserved C-terminal domain 454 564 4.8E-19 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Pfam PF12344 Ultra-violet resistance protein B 571 613 4.5E-20 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 SUPERFAMILY SSF52540 24 434 4.87E-133 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Pfam PF02151 UvrB/uvrC motif 648 681 2.5E-7 T 23-04-2016 IPR001943 UVR domain GO:0005515 RBRH_RS05485 1c665e64cf70e72e434a498590f6206b 696 Hamap MF_00204 UvrABC system protein B [uvrB]. 23 682 43.232 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RBRH_RS11910 63a9d018ca8185fb62a9a6d8ff37d641 403 SMART SM00359 2 87 2.5E-16 T 23-04-2016 IPR002478 PUA domain GO:0003723 RBRH_RS11910 63a9d018ca8185fb62a9a6d8ff37d641 403 Gene3D G3DSA:2.30.130.10 1 70 2.4E-25 T 23-04-2016 IPR015947 PUA-like domain RBRH_RS11910 63a9d018ca8185fb62a9a6d8ff37d641 403 Gene3D G3DSA:3.40.50.150 191 401 1.1E-61 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11910 63a9d018ca8185fb62a9a6d8ff37d641 403 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 177 357 9.1E-29 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RBRH_RS11910 63a9d018ca8185fb62a9a6d8ff37d641 403 PANTHER PTHR11061 3 401 9.1E-105 T 23-04-2016 RBRH_RS11910 63a9d018ca8185fb62a9a6d8ff37d641 403 Gene3D G3DSA:3.30.750.80 72 187 2.2E-40 T 23-04-2016 RBRH_RS11910 63a9d018ca8185fb62a9a6d8ff37d641 403 PANTHER PTHR11061:SF12 3 401 9.1E-105 T 23-04-2016 RBRH_RS11910 63a9d018ca8185fb62a9a6d8ff37d641 403 SUPERFAMILY SSF88697 1 71 4.9E-18 T 23-04-2016 IPR015947 PUA-like domain RBRH_RS11910 63a9d018ca8185fb62a9a6d8ff37d641 403 SUPERFAMILY SSF53335 78 399 8.52E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11865 916f5df044b35fd77a7b88ae2d6b2656 346 Pfam PF01636 Phosphotransferase enzyme family 54 280 2.8E-34 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase RBRH_RS11865 916f5df044b35fd77a7b88ae2d6b2656 346 Gene3D G3DSA:3.90.1200.10 126 344 3.7E-49 T 23-04-2016 RBRH_RS11865 916f5df044b35fd77a7b88ae2d6b2656 346 SUPERFAMILY SSF56112 19 345 1.75E-78 T 23-04-2016 IPR011009 Protein kinase-like domain RBRH_RS11865 916f5df044b35fd77a7b88ae2d6b2656 346 PANTHER PTHR39573:SF1 16 343 5.4E-135 T 23-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RBRH_RS11865 916f5df044b35fd77a7b88ae2d6b2656 346 PANTHER PTHR39573 16 343 5.4E-135 T 23-04-2016 RBRH_RS11865 916f5df044b35fd77a7b88ae2d6b2656 346 Hamap MF_01497 Stress response kinase A [srkA]. 18 339 47.081 T 23-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RBRH_RS06065 c82dee5370353f762fcb769b374ffcd3 410 Pfam PF00155 Aminotransferase class I and II 37 389 2.0E-48 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RBRH_RS06065 c82dee5370353f762fcb769b374ffcd3 410 Gene3D G3DSA:3.90.1150.10 283 406 1.1E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS06065 c82dee5370353f762fcb769b374ffcd3 410 Gene3D G3DSA:3.40.640.10 53 282 4.8E-67 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS06065 c82dee5370353f762fcb769b374ffcd3 410 PANTHER PTHR11751 11 407 8.5E-169 T 23-04-2016 RBRH_RS06065 c82dee5370353f762fcb769b374ffcd3 410 PANTHER PTHR11751:SF303 11 407 8.5E-169 T 23-04-2016 RBRH_RS06065 c82dee5370353f762fcb769b374ffcd3 410 SUPERFAMILY SSF53383 6 402 1.11E-93 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS01290 b4b264959df4945efa3f666ad5981990 376 PANTHER PTHR21015:SF22 6 370 2.9E-108 T 23-04-2016 RBRH_RS01290 b4b264959df4945efa3f666ad5981990 376 Gene3D G3DSA:3.40.50.2000 3 194 3.3E-67 T 23-04-2016 RBRH_RS01290 b4b264959df4945efa3f666ad5981990 376 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 352 8.4E-102 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01290 b4b264959df4945efa3f666ad5981990 376 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 357 35.686 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01290 b4b264959df4945efa3f666ad5981990 376 PANTHER PTHR21015 6 370 2.9E-108 T 23-04-2016 RBRH_RS01290 b4b264959df4945efa3f666ad5981990 376 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 7 143 7.7E-40 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01290 b4b264959df4945efa3f666ad5981990 376 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 331 2.3E-35 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS01290 b4b264959df4945efa3f666ad5981990 376 SUPERFAMILY SSF53756 5 357 6.57E-117 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 Gene3D G3DSA:3.30.2090.10 707 774 1.5E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 Gene3D G3DSA:3.30.2090.10 182 264 1.9E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 Gene3D G3DSA:3.30.2090.10 846 857 1.5E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 SUPERFAMILY SSF82714 183 266 3.14E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 Pfam PF00873 AcrB/AcrD/AcrF family 840 1080 4.9E-81 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 Pfam PF00873 AcrB/AcrD/AcrF family 5 777 2.0E-236 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 SUPERFAMILY SSF82693 136 182 9.29E-24 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 SUPERFAMILY SSF82693 268 324 9.29E-24 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PANTHER PTHR32063:SF34 1 776 0.0 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PANTHER PTHR32063:SF34 848 1090 0.0 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 SUPERFAMILY SSF82866 884 1082 3.27E-41 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PANTHER PTHR32063 1 776 0.0 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PANTHER PTHR32063 848 1090 0.0 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 Gene3D G3DSA:3.30.70.1430 560 647 5.4E-9 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 SUPERFAMILY SSF82693 557 652 3.45E-14 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 Gene3D G3DSA:1.10.3850.10 867 1082 4.4E-52 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 SUPERFAMILY SSF82714 707 776 1.7E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 Gene3D G3DSA:1.20.1640.10 287 494 3.4E-60 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 SUPERFAMILY SSF82866 290 491 5.89E-50 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 Gene3D G3DSA:3.30.70.1430 40 142 5.2E-26 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 SUPERFAMILY SSF82693 40 133 1.62E-21 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.1E-82 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.1E-82 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.1E-82 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.1E-82 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.1E-82 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.1E-82 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.1E-82 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 2.1E-82 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 2.1E-82 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 SUPERFAMILY SSF82693 663 703 3.49E-7 T 23-04-2016 RBRH_RS08430 0e15be7cafe27ebf982015822a58faab 1106 SUPERFAMILY SSF82693 861 906 3.49E-7 T 23-04-2016 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 PANTHER PTHR22942 15 346 7.9E-205 T 23-04-2016 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 Gene3D G3DSA:3.40.50.300 44 278 4.1E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 ProSitePatterns PS00321 recA signature. 224 232 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 SUPERFAMILY SSF52540 14 278 6.69E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 14 335 1.5E-172 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 Hamap MF_00268 Protein RecA [recA]. 15 340 51.977 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 SMART SM00382 68 239 1.2E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 PRINTS PR00142 RecA protein signature 176 205 1.3E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 PRINTS PR00142 RecA protein signature 138 167 1.3E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 PRINTS PR00142 RecA protein signature 221 249 1.3E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 PRINTS PR00142 RecA protein signature 104 133 1.3E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 PRINTS PR00142 RecA protein signature 308 325 1.3E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 PRINTS PR00142 RecA protein signature 254 283 1.3E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 Gene3D G3DSA:3.30.250.10 279 337 7.7E-32 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 PANTHER PTHR22942:SF1 15 346 7.9E-205 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 SUPERFAMILY SSF54752 279 337 3.92E-23 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RBRH_RS10290 2ff6f4faebd4cd63cbb2786273ced344 354 Pfam PF00154 recA bacterial DNA recombination protein 17 279 3.8E-145 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RBRH_RS07710 f3868aad59186eaf7ed650f97907427d 348 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 339 51.31 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS07710 f3868aad59186eaf7ed650f97907427d 348 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 RBRH_RS07710 f3868aad59186eaf7ed650f97907427d 348 SUPERFAMILY SSF51395 6 337 1.61E-104 T 23-04-2016 RBRH_RS07710 f3868aad59186eaf7ed650f97907427d 348 Pfam PF01180 Dihydroorotate dehydrogenase 51 334 4.1E-90 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RBRH_RS07710 f3868aad59186eaf7ed650f97907427d 348 PIRSF PIRSF000164 14 342 7.1E-94 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 RBRH_RS07710 f3868aad59186eaf7ed650f97907427d 348 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 295 315 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 RBRH_RS07710 f3868aad59186eaf7ed650f97907427d 348 Gene3D G3DSA:3.20.20.70 4 337 2.1E-125 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS07710 f3868aad59186eaf7ed650f97907427d 348 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 338 3.9E-131 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS07710 f3868aad59186eaf7ed650f97907427d 348 PANTHER PTHR11938 16 334 1.1E-90 T 23-04-2016 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 5.3E-36 T 23-04-2016 IPR000362 Fumarate lyase family RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 5.3E-36 T 23-04-2016 IPR000362 Fumarate lyase family RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 5.3E-36 T 23-04-2016 IPR000362 Fumarate lyase family RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 5.3E-36 T 23-04-2016 IPR000362 Fumarate lyase family RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 PANTHER PTHR11444 1 465 1.9E-253 T 23-04-2016 IPR000362 Fumarate lyase family RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 PANTHER PTHR11444:SF1 1 465 1.9E-253 T 23-04-2016 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 Pfam PF10415 Fumarase C C-terminus 409 462 1.3E-26 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 3.9E-6 T 23-04-2016 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 PRINTS PR00145 Argininosuccinate lyase family signature 176 196 3.9E-6 T 23-04-2016 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 3.9E-6 T 23-04-2016 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 462 1.7E-237 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 Gene3D G3DSA:1.20.200.10 140 404 9.3E-107 T 23-04-2016 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 SUPERFAMILY SSF48557 6 464 2.83E-160 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 Gene3D G3DSA:1.10.40.30 406 463 1.8E-33 T 23-04-2016 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 463 91.53 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 Pfam PF00206 Lyase 13 343 4.1E-116 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal RBRH_RS03150 42b72e3d55fce29d1f0c086e3b12475a 465 Gene3D G3DSA:1.10.275.10 4 139 4.4E-60 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 SMART SM00028 477 511 80.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 SMART SM00028 201 234 30.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 SMART SM00028 443 476 500.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 SMART SM00028 545 578 9.9 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 PANTHER PTHR23083 60 73 7.3E-36 T 23-04-2016 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 PANTHER PTHR23083 94 593 7.3E-36 T 23-04-2016 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 SUPERFAMILY SSF48452 418 579 5.69E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 SUPERFAMILY SSF48452 123 366 5.5E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 Pfam PF13432 Tetratricopeptide repeat 450 511 7.3E-7 T 23-04-2016 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 Pfam PF13432 Tetratricopeptide repeat 306 366 4.9E-5 T 23-04-2016 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 Pfam PF13432 Tetratricopeptide repeat 519 576 2.2E-4 T 23-04-2016 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 PANTHER PTHR23083:SF412 60 73 7.3E-36 T 23-04-2016 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 PANTHER PTHR23083:SF412 94 593 7.3E-36 T 23-04-2016 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 Gene3D G3DSA:1.25.40.10 418 570 5.2E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 Gene3D G3DSA:1.25.40.10 70 244 1.0E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS11055 1e4e8fe3c5af0fde8de501629d146e7a 593 Gene3D G3DSA:1.25.40.10 248 405 3.3E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS03550 abba9021a6afebce75c44c9f780c790f 247 Pfam PF00929 Exonuclease 4 165 1.7E-35 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RBRH_RS03550 abba9021a6afebce75c44c9f780c790f 247 PANTHER PTHR30231:SF0 1 234 1.1E-98 T 23-04-2016 RBRH_RS03550 abba9021a6afebce75c44c9f780c790f 247 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 214 1.4E-59 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS03550 abba9021a6afebce75c44c9f780c790f 247 Gene3D G3DSA:3.30.420.10 1 175 2.2E-64 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS03550 abba9021a6afebce75c44c9f780c790f 247 SUPERFAMILY SSF53098 1 176 9.49E-57 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS03550 abba9021a6afebce75c44c9f780c790f 247 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 232 3.1E-87 T 23-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS03550 abba9021a6afebce75c44c9f780c790f 247 SMART SM00479 2 174 9.6E-52 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RBRH_RS03550 abba9021a6afebce75c44c9f780c790f 247 PANTHER PTHR30231 1 234 1.1E-98 T 23-04-2016 RBRH_RS03635 19437f45debc228bf00a8fee1716233d 327 PANTHER PTHR30425 13 327 8.9E-145 T 23-04-2016 RBRH_RS03635 19437f45debc228bf00a8fee1716233d 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 315 3.9E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS03635 19437f45debc228bf00a8fee1716233d 327 PANTHER PTHR30425:SF1 13 327 8.9E-145 T 23-04-2016 RBRH_RS03635 19437f45debc228bf00a8fee1716233d 327 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 26 319 4.4E-88 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 RBRH_RS03635 19437f45debc228bf00a8fee1716233d 327 SUPERFAMILY SSF161098 45 312 3.14E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS03635 19437f45debc228bf00a8fee1716233d 327 Gene3D G3DSA:1.10.3720.10 40 324 1.1E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 PANTHER PTHR21087:SF0 1 176 1.7E-57 T 23-04-2016 RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 ProSitePatterns PS01128 Shikimate kinase signature. 66 91 - T 23-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 Hamap MF_00109 Shikimate kinase [aroK]. 10 176 28.899 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 PANTHER PTHR21087 1 176 1.7E-57 T 23-04-2016 RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 Gene3D G3DSA:3.40.50.300 11 176 5.9E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 SUPERFAMILY SSF52540 13 172 1.32E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 PRINTS PR01100 Shikimate kinase family signature 65 73 4.4E-22 T 23-04-2016 RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 PRINTS PR01100 Shikimate kinase family signature 83 92 4.4E-22 T 23-04-2016 RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 PRINTS PR01100 Shikimate kinase family signature 104 121 4.4E-22 T 23-04-2016 RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 PRINTS PR01100 Shikimate kinase family signature 37 50 4.4E-22 T 23-04-2016 RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 PRINTS PR01100 Shikimate kinase family signature 13 28 4.4E-22 T 23-04-2016 RBRH_RS04610 8c62abc5ea8d87be1429c76570c89418 200 Pfam PF01202 Shikimate kinase 19 175 1.9E-50 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 Gene3D G3DSA:3.30.540.10 2 156 2.3E-57 T 23-04-2016 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 1.3E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 1.3E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.3E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 1.3E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 1.3E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.3E-62 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 Gene3D G3DSA:3.40.190.80 157 257 7.1E-35 T 23-04-2016 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 Pfam PF00459 Inositol monophosphatase family 2 251 1.6E-69 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 3.5E-32 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 3.5E-32 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 3.5E-32 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 3.5E-32 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PANTHER PTHR20854:SF4 1 262 7.8E-105 T 23-04-2016 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 SUPERFAMILY SSF56655 1 259 1.27E-87 T 23-04-2016 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 RBRH_RS08030 1bfb21d9112e81d2d737e9ef3338827e 266 PANTHER PTHR20854 1 262 7.8E-105 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 SUPERFAMILY SSF54826 4 136 8.92E-55 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 PRINTS PR00148 Enolase signature 311 322 9.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 PRINTS PR00148 Enolase signature 334 348 9.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 PRINTS PR00148 Enolase signature 363 380 9.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 PRINTS PR00148 Enolase signature 37 51 9.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 PRINTS PR00148 Enolase signature 161 174 9.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 PRINTS PR00148 Enolase signature 107 123 9.9E-43 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 Pfam PF03952 Enolase, N-terminal domain 4 133 4.2E-58 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 424 1.6E-132 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 SUPERFAMILY SSF51604 139 426 1.98E-128 T 23-04-2016 IPR029065 Enolase C-terminal domain-like RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 Hamap MF_00318 Enolase [eno]. 2 411 44.714 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 SMART SM01193 4 134 1.2E-92 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 Gene3D G3DSA:3.20.20.120 128 424 4.4E-133 T 23-04-2016 IPR029065 Enolase C-terminal domain-like RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 PIRSF PIRSF001400 1 425 1.1E-188 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 PANTHER PTHR11902 1 427 1.2E-253 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 Gene3D G3DSA:3.30.390.10 4 126 6.5E-54 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 SMART SM01192 139 425 9.5E-222 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 1.4E-207 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS08195 837746b5a307ce5883ffee816fb8d6a0 427 ProSitePatterns PS00164 Enolase signature. 334 347 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RBRH_RS03575 14db3ad13f917c72eba66657d4560a2b 206 PANTHER PTHR30537:SF26 35 180 7.8E-22 T 23-04-2016 RBRH_RS03575 14db3ad13f917c72eba66657d4560a2b 206 Gene3D G3DSA:3.40.190.10 100 175 4.9E-17 T 23-04-2016 RBRH_RS03575 14db3ad13f917c72eba66657d4560a2b 206 SUPERFAMILY SSF53850 35 177 1.01E-19 T 23-04-2016 RBRH_RS03575 14db3ad13f917c72eba66657d4560a2b 206 Pfam PF03466 LysR substrate binding domain 35 175 4.7E-17 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS03575 14db3ad13f917c72eba66657d4560a2b 206 Gene3D G3DSA:1.10.10.10 5 34 4.1E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS03575 14db3ad13f917c72eba66657d4560a2b 206 Gene3D G3DSA:3.40.190.10 35 99 3.5E-13 T 23-04-2016 RBRH_RS03575 14db3ad13f917c72eba66657d4560a2b 206 PANTHER PTHR30537 35 180 7.8E-22 T 23-04-2016 RBRH_RS05990 5820cdd7e930e89e84498c229b23f3bc 150 SUPERFAMILY SSF55653 60 147 1.18E-25 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal RBRH_RS05990 5820cdd7e930e89e84498c229b23f3bc 150 SUPERFAMILY SSF55658 1 56 1.52E-18 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RBRH_RS05990 5820cdd7e930e89e84498c229b23f3bc 150 Gene3D G3DSA:3.40.5.10 1 52 8.1E-25 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal RBRH_RS05990 5820cdd7e930e89e84498c229b23f3bc 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 3.5E-46 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05990 5820cdd7e930e89e84498c229b23f3bc 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal RBRH_RS05990 5820cdd7e930e89e84498c229b23f3bc 150 PANTHER PTHR21368 1 146 7.6E-49 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05990 5820cdd7e930e89e84498c229b23f3bc 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.6E-22 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal RBRH_RS05990 5820cdd7e930e89e84498c229b23f3bc 150 Gene3D G3DSA:3.10.430.100 61 148 5.9E-28 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal RBRH_RS05990 5820cdd7e930e89e84498c229b23f3bc 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 1.2E-26 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal RBRH_RS05990 5820cdd7e930e89e84498c229b23f3bc 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.927 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS07305 af0d9257bca307a6217ddd37aa356e0e 1531 SUPERFAMILY SSF49373 1306 1367 3.14E-5 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments RBRH_RS07305 af0d9257bca307a6217ddd37aa356e0e 1531 Gene3D G3DSA:2.60.40.920 1205 1285 2.6E-8 T 23-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RBRH_RS07305 af0d9257bca307a6217ddd37aa356e0e 1531 Gene3D G3DSA:2.60.40.920 1304 1366 6.6E-4 T 23-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RBRH_RS07305 af0d9257bca307a6217ddd37aa356e0e 1531 Gene3D G3DSA:2.60.40.920 1090 1185 1.7E-13 T 23-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RBRH_RS07305 af0d9257bca307a6217ddd37aa356e0e 1531 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 31 327 7.7E-41 T 23-04-2016 IPR018003 Insecticidal toxin complex/plasmid virulence protein RBRH_RS07305 af0d9257bca307a6217ddd37aa356e0e 1531 SUPERFAMILY SSF49373 1204 1278 6.02E-9 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments RBRH_RS07305 af0d9257bca307a6217ddd37aa356e0e 1531 SUPERFAMILY SSF49373 1091 1172 5.76E-9 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments RBRH_RS08415 5ade32331ce5825d923d011c4c30e80c 154 Gene3D G3DSA:3.40.250.10 21 153 5.9E-34 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS08415 5ade32331ce5825d923d011c4c30e80c 154 SUPERFAMILY SSF52821 23 153 1.57E-13 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS06725 61c8f2ec1bf03ee1e0161fc481d62a81 146 PANTHER PTHR11527:SF122 15 146 1.1E-26 T 23-04-2016 RBRH_RS06725 61c8f2ec1bf03ee1e0161fc481d62a81 146 Gene3D G3DSA:2.60.40.790 5 146 1.6E-33 T 23-04-2016 IPR008978 HSP20-like chaperone RBRH_RS06725 61c8f2ec1bf03ee1e0161fc481d62a81 146 SUPERFAMILY SSF49764 5 145 3.66E-34 T 23-04-2016 IPR008978 HSP20-like chaperone RBRH_RS06725 61c8f2ec1bf03ee1e0161fc481d62a81 146 Pfam PF00011 Hsp20/alpha crystallin family 47 146 1.9E-17 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RBRH_RS06725 61c8f2ec1bf03ee1e0161fc481d62a81 146 PANTHER PTHR11527 15 146 1.1E-26 T 23-04-2016 IPR031107 Small heat shock protein HSP20 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Pfam PF00668 Condensation domain 4 97 2.6E-22 T 23-04-2016 IPR001242 Condensation domain RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 PANTHER PTHR24095 3 843 0.0 T 23-04-2016 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 SMART SM00823 Phosphopantetheine attachment site 769 838 3.2E-7 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 SUPERFAMILY SSF53474 844 1079 3.27E-54 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Pfam PF13193 AMP-binding enzyme C-terminal domain 669 742 9.2E-12 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Pfam PF13745 HxxPF-repeated domain 119 208 3.7E-33 T 23-04-2016 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 SUPERFAMILY SSF47336 761 834 9.95E-21 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 284 685 1.4E-142 T 23-04-2016 IPR010071 Amino acid adenylation domain RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Pfam PF00975 Thioesterase domain 860 986 2.8E-27 T 23-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Pfam PF00550 Phosphopantetheine attachment site 771 834 6.5E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Gene3D G3DSA:1.10.1200.10 756 839 1.3E-29 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 SUPERFAMILY SSF56801 222 782 7.06E-170 T 23-04-2016 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 PANTHER PTHR24095:SF43 3 843 0.0 T 23-04-2016 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 ProSitePatterns PS00455 Putative AMP-binding domain signature. 405 416 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 SUPERFAMILY SSF52777 5 249 4.34E-61 T 23-04-2016 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Gene3D G3DSA:3.40.50.1820 1012 1076 3.0E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Gene3D G3DSA:3.40.50.1820 843 962 3.0E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Pfam PF00501 AMP-binding enzyme 263 661 3.3E-103 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Gene3D G3DSA:3.40.50.980 413 572 4.3E-38 T 23-04-2016 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Gene3D G3DSA:2.30.38.10 573 651 9.3E-32 T 23-04-2016 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Gene3D G3DSA:3.40.50.980 255 412 9.8E-55 T 23-04-2016 RBRH_RS08660 88e2f0f38c30bd101552efe8ec31652d 1086 Gene3D G3DSA:3.30.300.30 655 754 1.8E-39 T 23-04-2016 RBRH_RS05460 8e59a7cad713bda6dd7189ce2dc5ab55 418 Pfam PF07690 Major Facilitator Superfamily 40 371 9.0E-37 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS05460 8e59a7cad713bda6dd7189ce2dc5ab55 418 SUPERFAMILY SSF103473 30 410 4.97E-54 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS05460 8e59a7cad713bda6dd7189ce2dc5ab55 418 PANTHER PTHR23505:SF8 19 413 1.8E-147 T 23-04-2016 RBRH_RS05460 8e59a7cad713bda6dd7189ce2dc5ab55 418 Gene3D G3DSA:1.20.1250.20 238 413 7.9E-22 T 23-04-2016 RBRH_RS05460 8e59a7cad713bda6dd7189ce2dc5ab55 418 Gene3D G3DSA:1.20.1250.20 35 205 8.1E-18 T 23-04-2016 RBRH_RS05460 8e59a7cad713bda6dd7189ce2dc5ab55 418 PANTHER PTHR23505 19 413 1.8E-147 T 23-04-2016 RBRH_RS16155 98b327d8c38b2b662a321453792e1b65 99 Gene3D G3DSA:1.20.59.10 50 90 5.0E-4 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RBRH_RS16155 98b327d8c38b2b662a321453792e1b65 99 SUPERFAMILY SSF48600 49 86 2.75E-8 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 SMART SM00912 86 206 4.1E-51 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 105 201 1.2E-20 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 SUPERFAMILY SSF51126 78 331 7.53E-65 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 SUPERFAMILY SSF51126 372 390 7.53E-65 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 PANTHER PTHR32093 1 415 5.5E-79 T 23-04-2016 RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 Gene3D G3DSA:2.160.20.10 74 364 1.0E-100 T 23-04-2016 IPR012334 Pectin lyase fold RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 670 697 1.7E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 566 598 0.056 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 700 732 0.004 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 376 410 0.016 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 531 563 3.5E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 812 838 8.7E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 330 370 1.2E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 503 542 0.076 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 463 501 0.0011 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 757 795 1.4E-9 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 546 585 1.8E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 Pfam PF05594 Haemagluttinin repeat 527 589 0.0017 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 Pfam PF05594 Haemagluttinin repeat 742 819 4.4E-7 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 Pfam PF05594 Haemagluttinin repeat 607 650 0.91 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 Pfam PF05594 Haemagluttinin repeat 253 330 3.0E-5 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 Pfam PF05594 Haemagluttinin repeat 665 697 0.017 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 Pfam PF05594 Haemagluttinin repeat 453 498 42.0 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 Pfam PF05860 haemagglutination activity domain 74 204 1.6E-33 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RBRH_RS16225 4506abb95ab5879d7cfa9ada256f855b 883 PANTHER PTHR32093:SF41 1 415 5.5E-79 T 23-04-2016 RBRH_RS07795 6b735018c5fe683fb651223367c17990 308 Gene3D G3DSA:3.40.50.10740 4 159 5.1E-39 T 23-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RBRH_RS07795 6b735018c5fe683fb651223367c17990 308 Gene3D G3DSA:3.50.30.60 172 297 3.7E-42 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RBRH_RS07795 6b735018c5fe683fb651223367c17990 308 SUPERFAMILY SSF52317 4 159 5.49E-31 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS07795 6b735018c5fe683fb651223367c17990 308 SUPERFAMILY SSF141986 142 294 5.23E-41 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RBRH_RS07795 6b735018c5fe683fb651223367c17990 308 PIRSF PIRSF028757 1 304 8.3E-70 T 23-04-2016 IPR003507 Peptidase family S66 RBRH_RS07795 6b735018c5fe683fb651223367c17990 308 PANTHER PTHR30237 5 307 1.8E-90 T 23-04-2016 RBRH_RS07795 6b735018c5fe683fb651223367c17990 308 PANTHER PTHR30237:SF2 5 307 1.8E-90 T 23-04-2016 RBRH_RS07795 6b735018c5fe683fb651223367c17990 308 Pfam PF02016 LD-carboxypeptidase 6 289 2.0E-66 T 23-04-2016 IPR003507 Peptidase family S66 RBRH_RS11590 054e9ad678e1d591bfcbc561bf3f89d1 319 Pfam PF03060 Nitronate monooxygenase 79 307 6.9E-26 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RBRH_RS11590 054e9ad678e1d591bfcbc561bf3f89d1 319 PANTHER PTHR32332:SF21 2 317 6.9E-151 T 23-04-2016 RBRH_RS11590 054e9ad678e1d591bfcbc561bf3f89d1 319 PANTHER PTHR32332 2 317 6.9E-151 T 23-04-2016 RBRH_RS11590 054e9ad678e1d591bfcbc561bf3f89d1 319 Gene3D G3DSA:3.20.20.70 9 303 3.2E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS11590 054e9ad678e1d591bfcbc561bf3f89d1 319 SUPERFAMILY SSF51412 6 299 4.03E-61 T 23-04-2016 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 620 42.476 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 SUPERFAMILY SSF53067 19 195 7.99E-54 T 23-04-2016 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 Gene3D G3DSA:3.30.420.40 132 209 8.5E-53 T 23-04-2016 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 Gene3D G3DSA:3.30.420.40 20 72 8.5E-53 T 23-04-2016 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 Pfam PF00012 Hsp70 protein 21 603 4.2E-175 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 Gene3D G3DSA:2.60.34.10 391 530 5.1E-50 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PANTHER PTHR19375:SF176 19 609 6.7E-247 T 23-04-2016 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 SUPERFAMILY SSF100934 508 619 9.81E-33 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PANTHER PTHR19375 19 609 6.7E-247 T 23-04-2016 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 Gene3D G3DSA:3.90.640.10 238 313 1.7E-6 T 23-04-2016 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PRINTS PR00301 70kDa heat shock protein signature 71 79 9.7E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PRINTS PR00301 70kDa heat shock protein signature 48 60 9.7E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PRINTS PR00301 70kDa heat shock protein signature 151 171 9.7E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PRINTS PR00301 70kDa heat shock protein signature 389 408 9.7E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PRINTS PR00301 70kDa heat shock protein signature 210 220 9.7E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PRINTS PR00301 70kDa heat shock protein signature 20 33 9.7E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PRINTS PR00301 70kDa heat shock protein signature 332 348 9.7E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PRINTS PR00301 70kDa heat shock protein signature 470 486 9.7E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 PRINTS PR00301 70kDa heat shock protein signature 363 383 9.7E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 8.3E-270 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 SUPERFAMILY SSF53067 200 380 2.59E-49 T 23-04-2016 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 SUPERFAMILY SSF100920 387 538 1.7E-47 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 Gene3D G3DSA:1.20.1270.10 531 619 6.3E-29 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 Gene3D G3DSA:3.30.420.40 210 237 2.1E-26 T 23-04-2016 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 Gene3D G3DSA:3.30.420.40 317 360 2.1E-26 T 23-04-2016 RBRH_RS08280 949e5fcb05ddeb3628af69ddbb790353 621 Gene3D G3DSA:3.30.30.30 73 109 3.8E-7 T 23-04-2016 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 Gene3D G3DSA:3.90.800.10 184 292 8.4E-46 T 23-04-2016 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 SUPERFAMILY SSF52374 107 433 7.24E-93 T 23-04-2016 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 76 640 53.144 T 23-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 Gene3D G3DSA:2.40.240.10 552 638 9.5E-31 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 113 124 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 107 422 1.1E-102 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 SUPERFAMILY SSF50715 428 639 7.32E-72 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 Gene3D G3DSA:1.10.1160.10 351 426 1.7E-33 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 Gene3D G3DSA:3.40.50.620 295 350 2.4E-41 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 Gene3D G3DSA:3.40.50.620 107 175 2.4E-41 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 PANTHER PTHR11451:SF29 355 643 1.7E-208 T 23-04-2016 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 PANTHER PTHR11451:SF29 88 330 1.7E-208 T 23-04-2016 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 107 642 5.2E-223 T 23-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 PRINTS PR00987 Glutamyl-tRNA synthetase signature 110 122 1.6E-8 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 PRINTS PR00987 Glutamyl-tRNA synthetase signature 139 152 1.6E-8 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 PRINTS PR00987 Glutamyl-tRNA synthetase signature 124 135 1.6E-8 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 PRINTS PR00987 Glutamyl-tRNA synthetase signature 293 303 1.6E-8 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 Gene3D G3DSA:2.40.240.10 436 551 3.3E-47 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 PANTHER PTHR11451 355 643 1.7E-208 T 23-04-2016 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 PANTHER PTHR11451 88 330 1.7E-208 T 23-04-2016 RBRH_RS03730 32f3b4a73cf5705f0893f545cfb54463 644 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 428 619 2.4E-56 T 23-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 RBRH_RS04515 dd62b2407418baa4ebb3864b8c0d062d 134 Gene3D G3DSA:3.30.420.80 11 134 1.3E-54 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04515 dd62b2407418baa4ebb3864b8c0d062d 134 PANTHER PTHR11759 16 134 3.6E-69 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04515 dd62b2407418baa4ebb3864b8c0d062d 134 ProSitePatterns PS00054 Ribosomal protein S11 signature. 102 124 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site RBRH_RS04515 dd62b2407418baa4ebb3864b8c0d062d 134 Pfam PF00411 Ribosomal protein S11 24 133 3.8E-50 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04515 dd62b2407418baa4ebb3864b8c0d062d 134 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 134 33.38 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04515 dd62b2407418baa4ebb3864b8c0d062d 134 SUPERFAMILY SSF53137 19 134 5.23E-48 T 23-04-2016 RBRH_RS04515 dd62b2407418baa4ebb3864b8c0d062d 134 PIRSF PIRSF002131 2 134 2.9E-54 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04515 dd62b2407418baa4ebb3864b8c0d062d 134 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 15 131 4.3E-56 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 Pfam PF12833 Helix-turn-helix domain 150 226 6.6E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 SUPERFAMILY SSF46689 181 228 4.39E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 362 368 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 SUPERFAMILY SSF53155 230 308 1.37E-18 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 Pfam PF02805 Metal binding domain of Ada 55 118 5.2E-29 T 23-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 Gene3D G3DSA:3.30.160.70 223 309 3.0E-29 T 23-04-2016 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 Gene3D G3DSA:1.10.10.60 126 180 2.1E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 SMART SM00342 142 224 1.5E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 SUPERFAMILY SSF46767 312 392 1.44E-29 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 PANTHER PTHR10815 200 391 3.6E-64 T 23-04-2016 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 Gene3D G3DSA:1.10.10.60 181 222 1.2E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 313 392 5.7E-32 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 233 308 1.4E-7 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 Gene3D G3DSA:1.10.10.10 312 392 5.8E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 Gene3D G3DSA:3.40.10.10 50 125 2.4E-31 T 23-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 SUPERFAMILY SSF57884 50 129 1.28E-30 T 23-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 SUPERFAMILY SSF46689 126 175 1.79E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 PANTHER PTHR10815:SF9 200 391 3.6E-64 T 23-04-2016 RBRH_RS00305 1ad82fba00ecf2c89a1817e70d1ab72e 409 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 312 391 3.1E-34 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RBRH_RS06510 3c6871c629afe9fbeeb7e1f13f0fce1d 227 Pfam PF01351 Ribonuclease HII 27 204 1.0E-38 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain RBRH_RS06510 3c6871c629afe9fbeeb7e1f13f0fce1d 227 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 205 37.014 T 23-04-2016 IPR022898 Ribonuclease HII GO:0004523 RBRH_RS06510 3c6871c629afe9fbeeb7e1f13f0fce1d 227 Gene3D G3DSA:3.30.420.10 25 166 2.5E-46 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS06510 3c6871c629afe9fbeeb7e1f13f0fce1d 227 PANTHER PTHR10954 25 209 4.2E-74 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 RBRH_RS06510 3c6871c629afe9fbeeb7e1f13f0fce1d 227 SUPERFAMILY SSF53098 24 209 1.02E-66 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS09130 2395e99e13f4ba803b2c2894f4bc982b 338 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 58 191 1.3E-33 T 23-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 RBRH_RS09130 2395e99e13f4ba803b2c2894f4bc982b 338 PANTHER PTHR15362 43 184 2.8E-33 T 23-04-2016 RBRH_RS09130 2395e99e13f4ba803b2c2894f4bc982b 338 Pfam PF01066 CDP-alcohol phosphatidyltransferase 51 114 1.7E-14 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RBRH_RS09130 2395e99e13f4ba803b2c2894f4bc982b 338 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 92 114 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RBRH_RS07620 759ce1a74f0e2d2bd2b2a3df56ca7eb4 207 Pfam PF11159 Protein of unknown function (DUF2939) 7 101 2.4E-24 T 23-04-2016 IPR021330 Protein of unknown function DUF2939 RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 SUPERFAMILY SSF74863 37 152 1.96E-34 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 Pfam PF11412 Disulphide bond corrector protein DsbC 38 151 5.4E-32 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 Gene3D G3DSA:3.40.30.10 505 612 8.9E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 203 408 4.0E-18 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 PANTHER PTHR32234 40 152 2.2E-138 T 23-04-2016 RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 PANTHER PTHR32234 168 617 2.2E-138 T 23-04-2016 RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 11 613 32.187 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 PANTHER PTHR32234:SF0 40 152 2.2E-138 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 PANTHER PTHR32234:SF0 168 617 2.2E-138 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 Pfam PF13098 Thioredoxin-like domain 519 608 1.4E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 SUPERFAMILY SSF52833 499 610 1.27E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 Gene3D G3DSA:2.60.40.1250 35 156 2.4E-38 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RBRH_RS04540 0791f04fe22258fcec3d71d849830320 621 ProSitePatterns PS00194 Thioredoxin family active site. 523 541 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RBRH_RS11180 53d17b01933f82ea91119b111291905b 301 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 16 293 1.3E-93 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RBRH_RS11180 53d17b01933f82ea91119b111291905b 301 Pfam PF01040 UbiA prenyltransferase family 29 275 7.8E-58 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RBRH_RS11180 53d17b01933f82ea91119b111291905b 301 PANTHER PTHR11048 14 298 5.0E-72 T 23-04-2016 RBRH_RS11180 53d17b01933f82ea91119b111291905b 301 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 68 90 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site RBRH_RS11180 53d17b01933f82ea91119b111291905b 301 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 13 294 18.967 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RBRH_RS03035 2e83a2003ab90f473db0e9c904994ef4 264 Gene3D G3DSA:3.40.190.10 26 156 4.0E-57 T 23-04-2016 RBRH_RS03035 2e83a2003ab90f473db0e9c904994ef4 264 PANTHER PTHR30429 1 264 9.3E-130 T 23-04-2016 IPR004872 Lipoprotein NlpA family RBRH_RS03035 2e83a2003ab90f473db0e9c904994ef4 264 Pfam PF03180 NLPA lipoprotein 29 264 1.8E-94 T 23-04-2016 IPR004872 Lipoprotein NlpA family RBRH_RS03035 2e83a2003ab90f473db0e9c904994ef4 264 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 25 264 1.4E-79 T 23-04-2016 IPR004872 Lipoprotein NlpA family RBRH_RS03035 2e83a2003ab90f473db0e9c904994ef4 264 SUPERFAMILY SSF53850 29 264 8.58E-91 T 23-04-2016 RBRH_RS03035 2e83a2003ab90f473db0e9c904994ef4 264 PIRSF PIRSF002854 2 264 1.1E-105 T 23-04-2016 IPR004872 Lipoprotein NlpA family RBRH_RS03245 d41619a98ceea816b755968070425523 363 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 43 54 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS03245 d41619a98ceea816b755968070425523 363 SMART SM00729 37 251 7.3E-11 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS03245 d41619a98ceea816b755968070425523 363 Pfam PF06463 Molybdenum Cofactor Synthesis C 219 344 3.1E-38 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS03245 d41619a98ceea816b755968070425523 363 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 28 363 40.969 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS03245 d41619a98ceea816b755968070425523 363 Pfam PF13353 4Fe-4S single cluster domain 45 136 9.0E-7 T 23-04-2016 RBRH_RS03245 d41619a98ceea816b755968070425523 363 Pfam PF04055 Radical SAM superfamily 41 210 1.2E-30 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS03245 d41619a98ceea816b755968070425523 363 Gene3D G3DSA:3.20.20.70 28 333 1.8E-78 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS03245 d41619a98ceea816b755968070425523 363 SUPERFAMILY SSF102114 29 314 1.7E-73 T 23-04-2016 RBRH_RS03245 d41619a98ceea816b755968070425523 363 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 29 363 9.2E-115 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS03245 d41619a98ceea816b755968070425523 363 PANTHER PTHR22960 28 316 1.3E-119 T 23-04-2016 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 Gene3D G3DSA:3.50.50.60 2 234 4.4E-102 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 Gene3D G3DSA:3.50.50.60 340 397 4.4E-102 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 Gene3D G3DSA:3.90.700.10 235 339 4.9E-39 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 4.1E-7 T 23-04-2016 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.1E-7 T 23-04-2016 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 PANTHER PTHR11632:SF27 2 531 1.3E-246 T 23-04-2016 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 PANTHER PTHR11632 2 531 1.3E-246 T 23-04-2016 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 SUPERFAMILY SSF46977 417 516 7.06E-27 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 Pfam PF02910 Fumarate reductase flavoprotein C-term 433 511 6.7E-11 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 SUPERFAMILY SSF51905 2 246 5.6E-72 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 SUPERFAMILY SSF51905 347 439 5.6E-72 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 SUPERFAMILY SSF56425 229 344 7.18E-42 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 Gene3D G3DSA:1.20.58.100 408 510 2.8E-29 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 2 510 1.2E-193 T 23-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RBRH_RS02300 c971b8f2f6ee04b782623725413d7eb5 532 Pfam PF00890 FAD binding domain 4 383 1.6E-102 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 PANTHER PTHR30075 1 700 5.4E-251 T 23-04-2016 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 5 698 2.8E-194 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 SUPERFAMILY SSF109604 349 524 5.18E-18 T 23-04-2016 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 SMART SM00836 596 698 3.6E-4 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 561 1.9E-193 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 329 345 9.7E-27 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 257 272 9.7E-27 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 9.7E-27 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 405 424 9.7E-27 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 698 23.903 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 Gene3D G3DSA:1.10.730.10 593 690 1.5E-4 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS10455 1ceaef0621f0edb67d57bbcb81385314 700 Pfam PF05746 DALR anticodon binding domain 593 690 1.6E-8 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RBRH_RS04670 3382284b0d449098d2a0591d486fadab 578 Gene3D G3DSA:1.20.1560.10 15 344 2.0E-4 T 23-04-2016 RBRH_RS04670 3382284b0d449098d2a0591d486fadab 578 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS04670 3382284b0d449098d2a0591d486fadab 578 Gene3D G3DSA:3.40.50.300 396 567 3.6E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04670 3382284b0d449098d2a0591d486fadab 578 SMART SM00382 401 573 9.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS04670 3382284b0d449098d2a0591d486fadab 578 PANTHER PTHR11384:SF3 15 575 1.9E-179 T 23-04-2016 RBRH_RS04670 3382284b0d449098d2a0591d486fadab 578 SUPERFAMILY SSF52540 373 568 3.02E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04670 3382284b0d449098d2a0591d486fadab 578 Pfam PF00005 ABC transporter 396 527 6.6E-17 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS04670 3382284b0d449098d2a0591d486fadab 578 Pfam PF06472 ABC transporter transmembrane region 2 14 298 4.6E-58 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS04670 3382284b0d449098d2a0591d486fadab 578 PANTHER PTHR11384 15 575 1.9E-179 T 23-04-2016 RBRH_RS04670 3382284b0d449098d2a0591d486fadab 578 SUPERFAMILY SSF90123 15 344 3.14E-16 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS00120 940f2dce94874a8ee4803f7d2c35928f 458 Pfam PF04984 Phage tail sheath protein 234 439 3.2E-17 T 23-04-2016 IPR007067 Tail sheath protein RBRH_RS00120 940f2dce94874a8ee4803f7d2c35928f 458 PANTHER PTHR35861:SF1 173 454 4.7E-37 T 23-04-2016 RBRH_RS00120 940f2dce94874a8ee4803f7d2c35928f 458 PANTHER PTHR35861 173 454 4.7E-37 T 23-04-2016 RBRH_RS02585 c8ff4410d06e8246a6a545a3c19d17ba 189 SUPERFAMILY SSF51283 3 188 1.96E-52 T 23-04-2016 IPR029054 dUTPase-like RBRH_RS02585 c8ff4410d06e8246a6a545a3c19d17ba 189 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 189 28.819 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RBRH_RS02585 c8ff4410d06e8246a6a545a3c19d17ba 189 PANTHER PTHR11241:SF1 1 188 1.4E-76 T 23-04-2016 RBRH_RS02585 c8ff4410d06e8246a6a545a3c19d17ba 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 188 7.3E-50 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RBRH_RS02585 c8ff4410d06e8246a6a545a3c19d17ba 189 Pfam PF00692 dUTPase 83 185 6.8E-7 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RBRH_RS02585 c8ff4410d06e8246a6a545a3c19d17ba 189 PANTHER PTHR11241 1 188 1.4E-76 T 23-04-2016 RBRH_RS02585 c8ff4410d06e8246a6a545a3c19d17ba 189 Gene3D G3DSA:2.70.40.10 3 188 1.7E-68 T 23-04-2016 IPR029054 dUTPase-like RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 Gene3D G3DSA:3.40.47.10 3 260 4.4E-82 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 1.4E-199 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 Gene3D G3DSA:3.40.47.10 263 411 2.7E-59 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 6.1E-36 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 SUPERFAMILY SSF53901 4 252 3.2E-80 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 SUPERFAMILY SSF53901 214 411 4.61E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 SMART SM00825 Beta-ketoacyl synthase 6 412 1.9E-15 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 PIRSF PIRSF000447 1 412 8.4E-190 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 PANTHER PTHR11712 3 411 1.7E-214 T 23-04-2016 RBRH_RS03330 66cbc49b3176ce1412e4483666a157e4 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 5.3E-61 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS01655 8c6bf7678164c75c47bf2bfc9277b35c 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 74 7.4E-20 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RBRH_RS01655 8c6bf7678164c75c47bf2bfc9277b35c 280 Gene3D G3DSA:3.40.50.10490 103 270 2.3E-40 T 23-04-2016 RBRH_RS01655 8c6bf7678164c75c47bf2bfc9277b35c 280 SUPERFAMILY SSF46689 2 76 7.35E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS01655 8c6bf7678164c75c47bf2bfc9277b35c 280 Pfam PF01380 SIS domain 122 249 2.1E-21 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RBRH_RS01655 8c6bf7678164c75c47bf2bfc9277b35c 280 SUPERFAMILY SSF53697 93 266 1.32E-40 T 23-04-2016 RBRH_RS01655 8c6bf7678164c75c47bf2bfc9277b35c 280 PANTHER PTHR30514 1 280 3.6E-77 T 23-04-2016 RBRH_RS01655 8c6bf7678164c75c47bf2bfc9277b35c 280 Gene3D G3DSA:1.10.10.10 1 77 1.2E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS01655 8c6bf7678164c75c47bf2bfc9277b35c 280 ProSitePatterns PS00356 LacI-type HTH domain signature. 35 53 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RBRH_RS01655 8c6bf7678164c75c47bf2bfc9277b35c 280 PANTHER PTHR30514:SF1 1 280 3.6E-77 T 23-04-2016 RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 Gene3D G3DSA:3.40.190.10 179 264 1.4E-22 T 23-04-2016 RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 PANTHER PTHR30419 1 290 1.7E-90 T 23-04-2016 RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.6E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 Pfam PF03466 LysR substrate binding domain 89 291 7.5E-48 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 Gene3D G3DSA:1.10.10.10 4 89 1.3E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 SUPERFAMILY SSF53850 90 294 2.31E-44 T 23-04-2016 RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 Gene3D G3DSA:3.40.190.10 91 178 1.3E-18 T 23-04-2016 RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 SUPERFAMILY SSF46785 3 113 5.26E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 PANTHER PTHR30419:SF3 1 290 1.7E-90 T 23-04-2016 RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06175 2b8fb30bdbc458ca641f8eb253863445 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS11635 7a57fef55b804e8c8b009b5518647983 96 Gene3D G3DSA:1.20.5.780 9 88 5.3E-19 T 23-04-2016 RBRH_RS11635 7a57fef55b804e8c8b009b5518647983 96 PANTHER PTHR35401:SF1 1 96 1.6E-31 T 23-04-2016 RBRH_RS11635 7a57fef55b804e8c8b009b5518647983 96 Pfam PF08681 Protein of unknown function (DUF1778) 14 88 1.5E-26 T 23-04-2016 IPR014795 Vibrio phage ICP1, Orf50 RBRH_RS11635 7a57fef55b804e8c8b009b5518647983 96 PANTHER PTHR35401 1 96 1.6E-31 T 23-04-2016 RBRH_RS11635 7a57fef55b804e8c8b009b5518647983 96 SUPERFAMILY SSF47598 10 87 2.97E-21 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RBRH_RS01260 486ab15670b51ba03f163a960ed7e681 596 PANTHER PTHR30627:SF1 12 595 3.2E-192 T 23-04-2016 RBRH_RS01260 486ab15670b51ba03f163a960ed7e681 596 SUPERFAMILY SSF56519 67 234 1.7E-43 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RBRH_RS01260 486ab15670b51ba03f163a960ed7e681 596 SUPERFAMILY SSF56601 205 578 1.24E-83 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS01260 486ab15670b51ba03f163a960ed7e681 596 Gene3D G3DSA:3.40.710.10 242 563 4.8E-79 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS01260 486ab15670b51ba03f163a960ed7e681 596 PANTHER PTHR30627 12 595 3.2E-192 T 23-04-2016 RBRH_RS01260 486ab15670b51ba03f163a960ed7e681 596 Gene3D G3DSA:3.90.1310.10 142 241 9.8E-29 T 23-04-2016 RBRH_RS01260 486ab15670b51ba03f163a960ed7e681 596 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 557 2.5E-66 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RBRH_RS01260 486ab15670b51ba03f163a960ed7e681 596 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 219 1.1E-16 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RBRH_RS08775 17fb2ba5b2d0b45e253ffe498868aaf2 239 Gene3D G3DSA:3.20.20.70 18 227 6.1E-61 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS08775 17fb2ba5b2d0b45e253ffe498868aaf2 239 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 19 229 39.428 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 RBRH_RS08775 17fb2ba5b2d0b45e253ffe498868aaf2 239 PANTHER PTHR22854 17 227 5.7E-57 T 23-04-2016 RBRH_RS08775 17fb2ba5b2d0b45e253ffe498868aaf2 239 SUPERFAMILY SSF51366 19 226 6.12E-55 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RBRH_RS08775 17fb2ba5b2d0b45e253ffe498868aaf2 239 PANTHER PTHR22854:SF6 17 227 5.7E-57 T 23-04-2016 RBRH_RS08775 17fb2ba5b2d0b45e253ffe498868aaf2 239 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 21 224 4.1E-40 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 RBRH_RS01350 29a07375d899006b8d69410c1434e1f0 153 SUPERFAMILY SSF55811 26 138 1.9E-32 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS01350 29a07375d899006b8d69410c1434e1f0 153 PANTHER PTHR22769:SF35 24 146 3.6E-24 T 23-04-2016 RBRH_RS01350 29a07375d899006b8d69410c1434e1f0 153 ProSitePatterns PS00893 Nudix box signature. 61 82 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RBRH_RS01350 29a07375d899006b8d69410c1434e1f0 153 PANTHER PTHR22769 24 146 3.6E-24 T 23-04-2016 RBRH_RS01350 29a07375d899006b8d69410c1434e1f0 153 PRINTS PR00502 NUDIX hydrolase family signature 56 70 2.6E-9 T 23-04-2016 IPR020476 NUDIX hydrolase RBRH_RS01350 29a07375d899006b8d69410c1434e1f0 153 PRINTS PR00502 NUDIX hydrolase family signature 70 85 2.6E-9 T 23-04-2016 IPR020476 NUDIX hydrolase RBRH_RS01350 29a07375d899006b8d69410c1434e1f0 153 Gene3D G3DSA:3.90.79.10 27 150 6.8E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS01350 29a07375d899006b8d69410c1434e1f0 153 Pfam PF00293 NUDIX domain 29 128 5.5E-19 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RBRH_RS11415 91b4caf586c9e3b5c0b0b5e20cd46ca2 159 Pfam PF01467 Cytidylyltransferase-like 29 123 1.3E-16 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RBRH_RS11415 91b4caf586c9e3b5c0b0b5e20cd46ca2 159 SUPERFAMILY SSF52374 25 155 5.93E-23 T 23-04-2016 RBRH_RS11415 91b4caf586c9e3b5c0b0b5e20cd46ca2 159 PANTHER PTHR10739:SF26 27 159 6.8E-39 T 23-04-2016 RBRH_RS11415 91b4caf586c9e3b5c0b0b5e20cd46ca2 159 PANTHER PTHR10739 27 159 6.8E-39 T 23-04-2016 RBRH_RS11415 91b4caf586c9e3b5c0b0b5e20cd46ca2 159 Gene3D G3DSA:3.40.50.620 25 145 4.8E-34 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS11415 91b4caf586c9e3b5c0b0b5e20cd46ca2 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 92 4.2E-12 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RBRH_RS11415 91b4caf586c9e3b5c0b0b5e20cd46ca2 159 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 19 157 1.0E-61 T 23-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 RBRH_RS08000 1e8c3127445bf6bbba09ee9f811ca5f9 240 Gene3D G3DSA:1.25.40.10 38 161 9.9E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS08000 1e8c3127445bf6bbba09ee9f811ca5f9 240 SUPERFAMILY SSF48452 40 161 3.56E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS08000 1e8c3127445bf6bbba09ee9f811ca5f9 240 PANTHER PTHR23083 42 159 7.6E-17 T 23-04-2016 RBRH_RS08000 1e8c3127445bf6bbba09ee9f811ca5f9 240 SMART SM00028 131 159 77.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS08000 1e8c3127445bf6bbba09ee9f811ca5f9 240 SMART SM00028 97 130 0.004 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS08000 1e8c3127445bf6bbba09ee9f811ca5f9 240 SMART SM00028 63 96 5.9 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS08000 1e8c3127445bf6bbba09ee9f811ca5f9 240 Pfam PF13414 TPR repeat 107 144 1.8E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS08000 1e8c3127445bf6bbba09ee9f811ca5f9 240 Pfam PF13432 Tetratricopeptide repeat 37 95 7.5E-9 T 23-04-2016 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 Pfam PF01411 tRNA synthetases class II (A) 5 556 1.6E-218 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 695 1.1E-14 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 SUPERFAMILY SSF101353 252 451 8.63E-59 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 4.4E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 4.4E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 4.4E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 4.4E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 4.4E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 SUPERFAMILY SSF55681 2 251 3.23E-107 T 23-04-2016 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 Gene3D G3DSA:3.30.930.10 1 247 9.4E-124 T 23-04-2016 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 SUPERFAMILY SSF50447 453 552 3.53E-18 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 SMART SM00863 653 695 3.2E-17 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 PANTHER PTHR11777 1 874 0.0 T 23-04-2016 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 Pfam PF02272 DHHA1 domain 799 867 4.1E-16 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 PANTHER PTHR11777:SF9 1 874 0.0 T 23-04-2016 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 SUPERFAMILY SSF55186 552 707 1.11E-47 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RBRH_RS03750 a9abe90603a639a26ca20d831d79addf 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 201.689 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RBRH_RS08585 2175a1086e306d5fdc1dcdbfa0ef8d9b 249 SUPERFAMILY SSF48452 132 241 2.85E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS08585 2175a1086e306d5fdc1dcdbfa0ef8d9b 249 PANTHER PTHR26312:SF74 139 249 4.3E-16 T 23-04-2016 RBRH_RS08585 2175a1086e306d5fdc1dcdbfa0ef8d9b 249 PANTHER PTHR26312:SF74 5 11 4.3E-16 T 23-04-2016 RBRH_RS08585 2175a1086e306d5fdc1dcdbfa0ef8d9b 249 Pfam PF16331 TolA binding protein trimerisation 44 115 1.8E-16 T 23-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 RBRH_RS08585 2175a1086e306d5fdc1dcdbfa0ef8d9b 249 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 128 245 7.9E-39 T 23-04-2016 IPR014162 Tol-Pal system, YbgF RBRH_RS08585 2175a1086e306d5fdc1dcdbfa0ef8d9b 249 Gene3D G3DSA:1.25.40.10 132 239 1.2E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS08585 2175a1086e306d5fdc1dcdbfa0ef8d9b 249 Pfam PF13525 Outer membrane lipoprotein 128 225 1.8E-12 T 23-04-2016 RBRH_RS08585 2175a1086e306d5fdc1dcdbfa0ef8d9b 249 PANTHER PTHR26312 139 249 4.3E-16 T 23-04-2016 RBRH_RS08585 2175a1086e306d5fdc1dcdbfa0ef8d9b 249 PANTHER PTHR26312 5 11 4.3E-16 T 23-04-2016 RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 SUPERFAMILY SSF52540 9 236 4.02E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 Pfam PF12848 ABC transporter 228 301 1.1E-8 T 23-04-2016 IPR032781 ABC-transporter extension domain RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 PANTHER PTHR19211:SF45 554 592 4.1E-220 T 23-04-2016 RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 PANTHER PTHR19211:SF45 1 531 4.1E-220 T 23-04-2016 RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 Pfam PF16326 ABC transporter C-terminal domain 582 650 2.9E-20 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 PANTHER PTHR19211 554 592 4.1E-220 T 23-04-2016 RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 PANTHER PTHR19211 1 531 4.1E-220 T 23-04-2016 RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 Gene3D G3DSA:3.40.50.300 325 520 2.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 SUPERFAMILY SSF52540 317 521 4.17E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 Pfam PF00005 ABC transporter 19 189 5.5E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 Pfam PF00005 ABC transporter 342 473 1.5E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 Gene3D G3DSA:3.40.50.300 140 284 6.4E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 Gene3D G3DSA:3.40.50.300 7 106 6.4E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 SMART SM00382 28 234 4.7E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS09545 cafa52c2cce561ab8236a899799d53af 657 SMART SM00382 348 518 3.4E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS10930 7adbbf19524665bbe90e179100cae562 304 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 79 95 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RBRH_RS10930 7adbbf19524665bbe90e179100cae562 304 PANTHER PTHR23024:SF47 63 304 9.9E-76 T 23-04-2016 RBRH_RS10930 7adbbf19524665bbe90e179100cae562 304 Pfam PF07859 alpha/beta hydrolase fold 79 279 3.5E-56 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RBRH_RS10930 7adbbf19524665bbe90e179100cae562 304 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 146 158 - T 23-04-2016 IPR033140 Lipase, GDXG, putative serine active site RBRH_RS10930 7adbbf19524665bbe90e179100cae562 304 PANTHER PTHR23024 63 304 9.9E-76 T 23-04-2016 RBRH_RS10930 7adbbf19524665bbe90e179100cae562 304 Gene3D G3DSA:3.40.50.1820 60 302 5.2E-71 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS10930 7adbbf19524665bbe90e179100cae562 304 SUPERFAMILY SSF53474 23 302 6.35E-60 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS00635 4c5f1bf938c42c5367ffd9eb4cdd3c0e 111 SMART SM00530 39 95 5.0E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RBRH_RS00635 4c5f1bf938c42c5367ffd9eb4cdd3c0e 111 SUPERFAMILY SSF47413 25 103 3.13E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS00635 4c5f1bf938c42c5367ffd9eb4cdd3c0e 111 Pfam PF13744 Helix-turn-helix domain 18 97 3.2E-30 T 23-04-2016 RBRH_RS00635 4c5f1bf938c42c5367ffd9eb4cdd3c0e 111 Gene3D G3DSA:1.10.260.40 25 89 4.7E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 PANTHER PTHR18937 2 391 2.1E-263 T 23-04-2016 RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 Gene3D G3DSA:3.40.50.300 1011 1163 1.8E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 Gene3D G3DSA:3.40.50.300 2 166 1.8E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 PANTHER PTHR18937:SF261 420 1164 2.1E-263 T 23-04-2016 RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1161 0.0 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 Pfam PF06470 SMC proteins Flexible Hinge Domain 521 623 3.9E-5 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1163 22.394 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1154 2.1E-62 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 SMART SM00968 518 625 6.7E-11 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 PANTHER PTHR18937 420 1164 2.1E-263 T 23-04-2016 RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 PANTHER PTHR18937:SF261 2 391 2.1E-263 T 23-04-2016 RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 PIRSF PIRSF005719 1 1170 1.6E-248 T 23-04-2016 IPR024704 Structural maintenance of chromosomes protein RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 SUPERFAMILY SSF52540 2 169 2.94E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 SUPERFAMILY SSF52540 1047 1159 2.94E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06400 c00d41874d4c78499dfe203b4fcafc37 1172 SUPERFAMILY SSF75553 476 672 1.1E-9 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 Gene3D G3DSA:2.30.40.10 405 469 9.4E-15 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 SUPERFAMILY SSF51338 9 61 2.79E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 SUPERFAMILY SSF51338 420 479 2.79E-20 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 SUPERFAMILY SSF51556 62 420 1.33E-83 T 23-04-2016 IPR032466 Metal-dependent hydrolase RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 PANTHER PTHR22935 344 490 7.3E-36 T 23-04-2016 RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 Gene3D G3DSA:3.30.1490.130 289 344 2.6E-27 T 23-04-2016 IPR023100 D-aminoacylase, insert domain GO:0016811 RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 Gene3D G3DSA:2.30.40.10 9 75 2.3E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 Pfam PF07969 Amidohydrolase family 50 465 2.7E-47 T 23-04-2016 IPR013108 Amidohydrolase 3 RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 Gene3D G3DSA:3.20.20.140 345 404 3.3E-116 T 23-04-2016 RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 Gene3D G3DSA:3.20.20.140 76 286 3.3E-116 T 23-04-2016 RBRH_RS10900 fa43ec17a6471aaccba0c7f7fc1e7ef2 492 PANTHER PTHR22935:SF55 344 490 7.3E-36 T 23-04-2016 RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 1.0E-25 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 PANTHER PTHR30154:SF28 3 152 1.4E-57 T 23-04-2016 RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.7E-16 T 23-04-2016 RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 Gene3D G3DSA:3.30.70.920 56 152 5.4E-31 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 SUPERFAMILY SSF46785 2 62 4.34E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 SUPERFAMILY SSF54909 63 152 6.3E-23 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 PANTHER PTHR30154 3 152 1.4E-57 T 23-04-2016 RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 Gene3D G3DSA:1.10.10.10 4 55 1.3E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 7.6E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 7.6E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 7.6E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RBRH_RS11700 fa20bf1a2cf1deb6650bceef2ce9122f 152 SMART SM00344 3 112 2.0E-44 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 517 523 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 Gene3D G3DSA:3.40.50.1000 490 529 1.2E-41 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 Gene3D G3DSA:3.40.50.1000 641 780 1.2E-41 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 263 816 9.6E-170 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 Gene3D G3DSA:2.70.150.10 263 415 2.9E-21 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 737 749 5.1E-22 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 515 529 5.1E-22 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 670 5.1E-22 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 713 732 5.1E-22 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 364 378 5.1E-22 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 Gene3D G3DSA:3.30.70.100 123 187 2.4E-6 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 287 531 6.0E-33 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 612 792 2.8E-36 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 PANTHER PTHR24093 123 810 7.8E-226 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 SUPERFAMILY SSF56784 514 533 2.47E-52 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 SUPERFAMILY SSF56784 571 813 2.47E-52 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 SUPERFAMILY SSF81665 415 506 1.2E-14 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 SUPERFAMILY SSF81665 264 317 1.2E-14 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 Gene3D G3DSA:3.40.1110.10 530 640 4.9E-18 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 Pfam PF00702 haloacid dehalogenase-like hydrolase 514 727 1.7E-42 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 SUPERFAMILY SSF81653 317 414 1.19E-21 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 PANTHER PTHR24093:SF317 123 810 7.8E-226 T 23-04-2016 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 Pfam PF00122 E1-E2 ATPase 284 506 8.0E-62 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RBRH_RS06650 7400dbf2df637ddf9add6d49d76bc52e 819 SUPERFAMILY SSF55008 119 191 1.96E-8 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RBRH_RS03080 0a28b7dade42b817aef8de1a56bf5cab 219 Pfam PF05239 PRC-barrel domain 139 214 7.3E-7 T 23-04-2016 IPR027275 PRC-barrel domain RBRH_RS03080 0a28b7dade42b817aef8de1a56bf5cab 219 PANTHER PTHR33692 35 218 5.4E-41 T 23-04-2016 RBRH_RS03080 0a28b7dade42b817aef8de1a56bf5cab 219 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 46 217 3.0E-38 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RBRH_RS03080 0a28b7dade42b817aef8de1a56bf5cab 219 Pfam PF01782 RimM N-terminal domain 47 132 6.0E-18 T 23-04-2016 IPR002676 RimM protein GO:0006364 RBRH_RS03080 0a28b7dade42b817aef8de1a56bf5cab 219 Gene3D G3DSA:2.30.30.240 141 219 2.4E-23 T 23-04-2016 RBRH_RS03080 0a28b7dade42b817aef8de1a56bf5cab 219 SUPERFAMILY SSF50447 44 134 2.4E-14 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS03080 0a28b7dade42b817aef8de1a56bf5cab 219 SUPERFAMILY SSF50346 141 217 5.89E-17 T 23-04-2016 IPR011033 PRC-barrel-like RBRH_RS03080 0a28b7dade42b817aef8de1a56bf5cab 219 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 45 219 21.299 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RBRH_RS03080 0a28b7dade42b817aef8de1a56bf5cab 219 Gene3D G3DSA:2.40.30.60 38 135 3.0E-28 T 23-04-2016 IPR002676 RimM protein GO:0006364 RBRH_RS00860 e1d900c69821ab604415b9664182d460 87 PANTHER PTHR37304 9 67 1.5E-19 T 23-04-2016 RBRH_RS00860 e1d900c69821ab604415b9664182d460 87 PANTHER PTHR37304:SF1 9 67 1.5E-19 T 23-04-2016 RBRH_RS00860 e1d900c69821ab604415b9664182d460 87 Pfam PF04070 Domain of unknown function (DUF378) 13 68 4.1E-25 T 23-04-2016 IPR007211 Protein of unknown function DUF378 RBRH_RS03610 f243bb341db250f7c031b3636ee81541 218 PANTHER PTHR10920:SF20 1 214 1.3E-87 T 23-04-2016 RBRH_RS03610 f243bb341db250f7c031b3636ee81541 218 SUPERFAMILY SSF53335 3 214 3.58E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS03610 f243bb341db250f7c031b3636ee81541 218 PIRSF PIRSF005461 1 218 3.1E-69 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RBRH_RS03610 f243bb341db250f7c031b3636ee81541 218 PANTHER PTHR10920 1 214 1.3E-87 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RBRH_RS03610 f243bb341db250f7c031b3636ee81541 218 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 213 31.565 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RBRH_RS03610 f243bb341db250f7c031b3636ee81541 218 Gene3D G3DSA:3.40.50.150 3 215 2.0E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS03610 f243bb341db250f7c031b3636ee81541 218 Pfam PF01728 FtsJ-like methyltransferase 28 211 5.2E-52 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 RBRH_RS08165 a9fef0fe0ffbca398c22c0d289c008b9 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 3.3E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RBRH_RS08165 a9fef0fe0ffbca398c22c0d289c008b9 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 3.3E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RBRH_RS08165 a9fef0fe0ffbca398c22c0d289c008b9 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 3.3E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RBRH_RS08165 a9fef0fe0ffbca398c22c0d289c008b9 294 Pfam PF12697 Alpha/beta hydrolase family 30 287 1.7E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RBRH_RS08165 a9fef0fe0ffbca398c22c0d289c008b9 294 PANTHER PTHR10992 5 294 7.7E-32 T 23-04-2016 RBRH_RS08165 a9fef0fe0ffbca398c22c0d289c008b9 294 Gene3D G3DSA:3.40.50.1820 3 293 7.0E-60 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08165 a9fef0fe0ffbca398c22c0d289c008b9 294 SUPERFAMILY SSF53474 5 294 1.04E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS00695 139eb4e87be124cdaa98ee94ee1645a8 145 Pfam PF06995 Phage P2 GpU 7 126 8.4E-39 T 23-04-2016 IPR009734 Myoviridae, GpU RBRH_RS00695 139eb4e87be124cdaa98ee94ee1645a8 145 PIRSF PIRSF029208 1 144 2.1E-44 T 23-04-2016 IPR016912 Bacteriophage P2, GpU RBRH_RS05455 b310d2cc512e1e532d764b48381e98b1 231 SUPERFAMILY SSF48317 7 161 3.66E-12 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RBRH_RS05455 b310d2cc512e1e532d764b48381e98b1 231 Pfam PF01569 PAP2 superfamily 74 151 2.6E-9 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RBRH_RS05455 b310d2cc512e1e532d764b48381e98b1 231 Gene3D G3DSA:1.20.144.10 78 154 9.9E-8 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RBRH_RS11040 e45395642f293ccc70e3ce9352370fd2 212 SMART SM00464 11 208 7.0E-15 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RBRH_RS11040 e45395642f293ccc70e3ce9352370fd2 212 PANTHER PTHR23327:SF0 9 123 2.5E-22 T 23-04-2016 RBRH_RS11040 e45395642f293ccc70e3ce9352370fd2 212 SUPERFAMILY SSF88697 11 206 3.98E-49 T 23-04-2016 IPR015947 PUA-like domain RBRH_RS11040 e45395642f293ccc70e3ce9352370fd2 212 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 206 7.2E-22 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RBRH_RS11040 e45395642f293ccc70e3ce9352370fd2 212 PANTHER PTHR23327 9 123 2.5E-22 T 23-04-2016 RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 Gene3D G3DSA:3.40.50.10260 26 260 8.1E-56 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 28 232 19.713 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 PANTHER PTHR12592:SF0 17 529 4.1E-107 T 23-04-2016 RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 Pfam PF03853 YjeF-related protein N-terminus 49 211 3.2E-38 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 PIRSF PIRSF017184 27 530 2.6E-101 T 23-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 PANTHER PTHR12592 17 529 4.1E-107 T 23-04-2016 RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 258 523 8.1E-63 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 SUPERFAMILY SSF53613 250 524 2.29E-66 T 23-04-2016 IPR029056 Ribokinase-like RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 304 315 - T 23-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 Gene3D G3DSA:3.40.1190.20 261 524 3.3E-79 T 23-04-2016 IPR029056 Ribokinase-like RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 SUPERFAMILY SSF64153 27 272 1.57E-50 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 251 524 22.993 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RBRH_RS07075 fe9e1814c2b53406f0ead4e536f72f3e 530 Pfam PF01256 Carbohydrate kinase 275 501 2.2E-56 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 PANTHER PTHR13789:SF90 247 422 4.0E-88 T 23-04-2016 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 PANTHER PTHR13789:SF90 11 208 4.0E-88 T 23-04-2016 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 Gene3D G3DSA:3.50.50.60 316 400 2.9E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 Gene3D G3DSA:3.50.50.60 10 183 2.9E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 328 343 4.0E-35 T 23-04-2016 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 379 395 4.0E-35 T 23-04-2016 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 361 379 4.0E-35 T 23-04-2016 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 4.0E-35 T 23-04-2016 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 343 359 4.0E-35 T 23-04-2016 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 Pfam PF01494 FAD binding domain 10 393 1.3E-75 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 SUPERFAMILY SSF51905 9 178 8.95E-62 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 SUPERFAMILY SSF51905 315 427 8.95E-62 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 PANTHER PTHR13789 247 422 4.0E-88 T 23-04-2016 RBRH_RS02870 37be311fef38f72a8abb5601f730ab6c 609 PANTHER PTHR13789 11 208 4.0E-88 T 23-04-2016 RBRH_RS08015 55b7621fd499e5794be9319002b96fbb 275 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 265 92.566 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RBRH_RS08015 55b7621fd499e5794be9319002b96fbb 275 SUPERFAMILY SSF56300 27 261 8.35E-27 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RBRH_RS08015 55b7621fd499e5794be9319002b96fbb 275 PANTHER PTHR34990 11 256 7.7E-70 T 23-04-2016 RBRH_RS08015 55b7621fd499e5794be9319002b96fbb 275 Gene3D G3DSA:3.60.21.10 26 149 7.9E-18 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RBRH_RS08015 55b7621fd499e5794be9319002b96fbb 275 Gene3D G3DSA:3.60.21.10 196 237 7.9E-18 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RBRH_RS08015 55b7621fd499e5794be9319002b96fbb 275 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 27 243 3.9E-65 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RBRH_RS08015 55b7621fd499e5794be9319002b96fbb 275 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 26 230 2.8E-10 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type RBRH_RS08015 55b7621fd499e5794be9319002b96fbb 275 PANTHER PTHR34990:SF1 11 256 7.7E-70 T 23-04-2016 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 Pfam PF01479 S4 domain 98 144 7.9E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 SMART SM01390 3 96 1.1E-47 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 SUPERFAMILY SSF55174 2 207 1.01E-68 T 23-04-2016 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 PANTHER PTHR11831:SF4 1 207 1.5E-90 T 23-04-2016 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 SMART SM00363 97 161 1.6E-18 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 Gene3D G3DSA:1.10.1050.10 2 102 3.1E-41 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 8.4E-31 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 1.3E-80 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 PANTHER PTHR11831 1 207 1.5E-90 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 35.428 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RBRH_RS04520 eac8e0d84bc3330ac75b344f948e1f60 207 Gene3D G3DSA:3.10.290.10 103 191 1.3E-33 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS12010 90b557c696c793b83935ba0205ae90ba 331 PIRSF PIRSF038471 6 287 3.2E-73 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RBRH_RS12010 90b557c696c793b83935ba0205ae90ba 331 PANTHER PTHR34138:SF1 5 283 1.7E-59 T 23-04-2016 RBRH_RS12010 90b557c696c793b83935ba0205ae90ba 331 PANTHER PTHR34138 5 283 1.7E-59 T 23-04-2016 RBRH_RS12010 90b557c696c793b83935ba0205ae90ba 331 Pfam PF04085 rod shape-determining protein MreC 131 273 1.7E-34 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RBRH_RS12010 90b557c696c793b83935ba0205ae90ba 331 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 278 2.4E-43 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 294 383 5.6E-19 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 Gene3D G3DSA:2.60.410.10 294 384 1.4E-24 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 Gene3D G3DSA:3.40.710.10 37 293 1.5E-94 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 7.2E-19 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 154 167 7.2E-19 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 127 144 7.2E-19 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 PANTHER PTHR21581 41 401 6.3E-101 T 23-04-2016 RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 41 272 1.6E-76 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 SMART SM00936 294 384 6.8E-28 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 PANTHER PTHR21581:SF3 41 401 6.3E-101 T 23-04-2016 RBRH_RS11370 61b6f5cafa064f23ac24585c11acc7b4 403 SUPERFAMILY SSF56601 37 337 1.84E-77 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS09245 2eea5733f2c32741e73c010d32d862f8 228 Pfam PF01467 Cytidylyltransferase-like 15 196 1.5E-22 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RBRH_RS09245 2eea5733f2c32741e73c010d32d862f8 228 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 13 69 5.9E-8 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RBRH_RS09245 2eea5733f2c32741e73c010d32d862f8 228 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 15 226 3.4E-40 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RBRH_RS09245 2eea5733f2c32741e73c010d32d862f8 228 PANTHER PTHR12039 12 227 1.5E-37 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RBRH_RS09245 2eea5733f2c32741e73c010d32d862f8 228 Gene3D G3DSA:3.40.50.620 12 227 5.7E-61 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS09245 2eea5733f2c32741e73c010d32d862f8 228 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 11 227 27.123 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RBRH_RS09245 2eea5733f2c32741e73c010d32d862f8 228 SUPERFAMILY SSF52374 12 226 1.81E-43 T 23-04-2016 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 412 7.3E-145 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 Gene3D G3DSA:3.40.605.10 3 225 1.7E-99 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 Gene3D G3DSA:3.40.605.10 381 422 1.7E-99 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 PANTHER PTHR11063:SF8 4 423 3.7E-171 T 23-04-2016 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 329 350 - T 23-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 PANTHER PTHR11063 4 423 3.7E-171 T 23-04-2016 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 Gene3D G3DSA:3.40.309.10 227 380 6.5E-41 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 422 41.026 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 SUPERFAMILY SSF53720 7 422 2.75E-116 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 Pfam PF00171 Aldehyde dehydrogenase family 12 284 2.8E-14 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 Pfam PF00171 Aldehyde dehydrogenase family 310 379 2.4E-8 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS01645 f8cf43985aa1748d10fcbee632dc93bd 423 PIRSF PIRSF000151 1 423 8.1E-169 T 23-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RBRH_RS10885 8fb95c7ac2fc27f874b377ace4513fa5 274 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 274 147.506 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS10885 8fb95c7ac2fc27f874b377ace4513fa5 274 PANTHER PTHR34354 1 274 1.6E-82 T 23-04-2016 RBRH_RS10885 8fb95c7ac2fc27f874b377ace4513fa5 274 SUPERFAMILY SSF55620 177 258 1.11E-10 T 23-04-2016 RBRH_RS10885 8fb95c7ac2fc27f874b377ace4513fa5 274 Gene3D G3DSA:3.30.1130.10 138 272 4.0E-49 T 23-04-2016 RBRH_RS10885 8fb95c7ac2fc27f874b377ace4513fa5 274 PANTHER PTHR34354:SF1 1 274 1.6E-82 T 23-04-2016 RBRH_RS10885 8fb95c7ac2fc27f874b377ace4513fa5 274 TIGRFAM TIGR03138 QueF: queuine synthase 3 274 4.9E-117 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS10885 8fb95c7ac2fc27f874b377ace4513fa5 274 Gene3D G3DSA:3.30.1130.10 14 129 2.6E-42 T 23-04-2016 RBRH_RS10885 8fb95c7ac2fc27f874b377ace4513fa5 274 PIRSF PIRSF004750 1 274 1.1E-117 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS10885 8fb95c7ac2fc27f874b377ace4513fa5 274 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 14 123 4.5E-46 T 23-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS10885 8fb95c7ac2fc27f874b377ace4513fa5 274 Pfam PF14489 QueF-like protein 187 260 2.4E-24 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS04955 e211f05a1fa0e95891746f6868a12afb 258 SUPERFAMILY SSF53213 3 257 2.09E-82 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RBRH_RS04955 e211f05a1fa0e95891746f6868a12afb 258 PANTHER PTHR30096 1 256 8.8E-95 T 23-04-2016 RBRH_RS04955 e211f05a1fa0e95891746f6868a12afb 258 Gene3D G3DSA:3.40.830.10 1 257 1.5E-89 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RBRH_RS04955 e211f05a1fa0e95891746f6868a12afb 258 PANTHER PTHR30096:SF0 1 256 8.8E-95 T 23-04-2016 RBRH_RS04955 e211f05a1fa0e95891746f6868a12afb 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 257 5.2E-45 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RBRH_RS04955 e211f05a1fa0e95891746f6868a12afb 258 PIRSF PIRSF006157 1 258 2.8E-88 T 23-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 RBRH_RS01520 f13b202c6b80d8d7e930d4dc2d892911 173 Gene3D G3DSA:3.40.50.9100 27 169 6.4E-65 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RBRH_RS01520 f13b202c6b80d8d7e930d4dc2d892911 173 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 28 167 1.8E-58 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RBRH_RS01520 f13b202c6b80d8d7e930d4dc2d892911 173 PIRSF PIRSF001399 25 171 2.5E-58 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RBRH_RS01520 f13b202c6b80d8d7e930d4dc2d892911 173 ProSitePatterns PS01029 Dehydroquinase class II signature. 32 49 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RBRH_RS01520 f13b202c6b80d8d7e930d4dc2d892911 173 Pfam PF01220 Dehydroquinase class II 28 165 8.3E-58 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RBRH_RS01520 f13b202c6b80d8d7e930d4dc2d892911 173 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 173 68.589 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RBRH_RS01520 f13b202c6b80d8d7e930d4dc2d892911 173 PANTHER PTHR21272 24 171 2.4E-85 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RBRH_RS01520 f13b202c6b80d8d7e930d4dc2d892911 173 SUPERFAMILY SSF52304 28 170 2.49E-60 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RBRH_RS01520 f13b202c6b80d8d7e930d4dc2d892911 173 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 42 166 9.0E-46 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RBRH_RS04895 ac2948f1a8e5db0b89d19e73b09f9380 110 PANTHER PTHR11986 1 98 4.8E-30 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS04895 ac2948f1a8e5db0b89d19e73b09f9380 110 PANTHER PTHR11986:SF17 1 98 4.8E-30 T 23-04-2016 RBRH_RS04895 ac2948f1a8e5db0b89d19e73b09f9380 110 Pfam PF00202 Aminotransferase class-III 1 89 1.5E-25 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS04895 ac2948f1a8e5db0b89d19e73b09f9380 110 SUPERFAMILY SSF53383 1 100 4.83E-27 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS04895 ac2948f1a8e5db0b89d19e73b09f9380 110 Gene3D G3DSA:3.40.640.10 1 88 1.2E-26 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS10235 8f834e0a189a08aed277828d8badc2db 337 SUPERFAMILY SSF53474 40 332 4.47E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS10235 8f834e0a189a08aed277828d8badc2db 337 Pfam PF00561 alpha/beta hydrolase fold 75 316 5.0E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RBRH_RS10235 8f834e0a189a08aed277828d8badc2db 337 PANTHER PTHR10794 23 332 1.6E-59 T 23-04-2016 RBRH_RS10235 8f834e0a189a08aed277828d8badc2db 337 Gene3D G3DSA:3.40.50.1820 73 189 2.5E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS10235 8f834e0a189a08aed277828d8badc2db 337 Gene3D G3DSA:3.40.50.1820 263 330 2.5E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS10235 8f834e0a189a08aed277828d8badc2db 337 PIRSF PIRSF005211 14 337 7.9E-102 T 23-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 7.5E-37 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 7.5E-37 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 7.5E-37 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 Gene3D G3DSA:2.40.50.100 20 82 1.7E-29 T 23-04-2016 RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 Pfam PF01016 Ribosomal L27 protein 2 82 1.9E-36 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 SUPERFAMILY SSF110324 2 82 1.22E-32 T 23-04-2016 RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 PANTHER PTHR15893 1 86 1.8E-44 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.382 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.0E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01410 a34d3fc0b9683a4f504dc34aaf124330 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-16 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS16090 db4c403bb2db39f2728ff63bbb5d9f73 326 PANTHER PTHR11615:SF119 6 256 6.4E-70 T 23-04-2016 RBRH_RS16090 db4c403bb2db39f2728ff63bbb5d9f73 326 SUPERFAMILY SSF53706 1 270 1.27E-77 T 23-04-2016 RBRH_RS16090 db4c403bb2db39f2728ff63bbb5d9f73 326 Gene3D G3DSA:3.40.50.740 34 105 1.7E-17 T 23-04-2016 RBRH_RS16090 db4c403bb2db39f2728ff63bbb5d9f73 326 Gene3D G3DSA:3.40.228.10 109 271 1.0E-46 T 23-04-2016 RBRH_RS16090 db4c403bb2db39f2728ff63bbb5d9f73 326 PANTHER PTHR11615 6 256 6.4E-70 T 23-04-2016 RBRH_RS16090 db4c403bb2db39f2728ff63bbb5d9f73 326 Pfam PF00384 Molybdopterin oxidoreductase 34 263 1.6E-32 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 Pfam PF04552 Sigma-54, DNA binding domain 336 490 1.5E-60 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 PANTHER PTHR32248:SF4 1 492 6.5E-129 T 23-04-2016 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 PRINTS PR00045 Sigma-54 factor signature 466 484 1.4E-27 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 PRINTS PR00045 Sigma-54 factor signature 392 404 1.4E-27 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 PRINTS PR00045 Sigma-54 factor signature 203 220 1.4E-27 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 PRINTS PR00045 Sigma-54 factor signature 408 419 1.4E-27 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 471 478 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 490 7.7E-134 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 380 399 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 PANTHER PTHR32248 1 492 6.5E-129 T 23-04-2016 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 PIRSF PIRSF000774 1 492 1.2E-149 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 Pfam PF04963 Sigma-54 factor, core binding domain 131 320 2.0E-53 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 RBRH_RS05385 1fb67c4446b5803865ca9637b84ec219 492 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 6.2E-15 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RBRH_RS04450 41466ea000aa75e9c127f3b9dcc74812 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 99 3.1E-21 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04450 41466ea000aa75e9c127f3b9dcc74812 102 PANTHER PTHR12903 3 100 1.4E-37 T 23-04-2016 RBRH_RS04450 41466ea000aa75e9c127f3b9dcc74812 102 SUPERFAMILY SSF50104 3 98 4.89E-29 T 23-04-2016 IPR008991 Translation protein SH3-like domain RBRH_RS04450 41466ea000aa75e9c127f3b9dcc74812 102 Gene3D G3DSA:2.30.30.30 3 89 2.6E-20 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 RBRH_RS04450 41466ea000aa75e9c127f3b9dcc74812 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 20.087 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04450 41466ea000aa75e9c127f3b9dcc74812 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 99 1.1E-32 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04450 41466ea000aa75e9c127f3b9dcc74812 102 SMART SM00739 3 30 7.0E-4 T 23-04-2016 IPR005824 KOW RBRH_RS04450 41466ea000aa75e9c127f3b9dcc74812 102 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 23-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.3E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.3E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 2.3E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 2.3E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PANTHER PTHR11405:SF1 8 304 1.4E-133 T 23-04-2016 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 SUPERFAMILY SSF53671 6 304 5.24E-103 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 Gene3D G3DSA:3.40.50.1370 7 144 3.5E-55 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PANTHER PTHR11405 8 304 1.4E-133 T 23-04-2016 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 6.0E-48 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 302 8.1E-49 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 305 76.677 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 221 231 8.8E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 8.8E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 8.8E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 8.8E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 283 294 8.8E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 Gene3D G3DSA:3.40.50.1370 145 291 8.8E-58 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS02010 12cd06168b6509206202475540dcad9b 310 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 304 2.6E-109 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RBRH_RS02895 ab30b218bf25fd2c824e1be46ec3d3db 179 SUPERFAMILY SSF52833 20 173 4.7E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS02895 ab30b218bf25fd2c824e1be46ec3d3db 179 Gene3D G3DSA:3.40.30.10 78 171 2.8E-7 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS02895 ab30b218bf25fd2c824e1be46ec3d3db 179 PANTHER PTHR10371 26 169 5.5E-16 T 23-04-2016 RBRH_RS02895 ab30b218bf25fd2c824e1be46ec3d3db 179 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 169 7.5E-30 T 23-04-2016 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 PRINTS PR00094 Adenylate kinase signature 81 97 1.6E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 PRINTS PR00094 Adenylate kinase signature 156 171 1.6E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 PRINTS PR00094 Adenylate kinase signature 4 17 1.6E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 PRINTS PR00094 Adenylate kinase signature 32 46 1.6E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 PRINTS PR00094 Adenylate kinase signature 173 187 1.6E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 TIGRFAM TIGR01351 adk: adenylate kinase 2 187 1.7E-73 T 23-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 Pfam PF00406 Adenylate kinase 5 185 1.3E-56 T 23-04-2016 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 SUPERFAMILY SSF52540 1 219 7.66E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 PANTHER PTHR23359 1 220 3.5E-106 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 Gene3D G3DSA:3.40.50.300 1 218 1.6E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 Hamap MF_00235 Adenylate kinase [adk]. 1 220 52.845 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RBRH_RS02155 0b3001d3cf486ea77de1a03da543585d 220 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.5E-17 T 23-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RBRH_RS06455 a363b13938872f690590284257024441 186 Gene3D G3DSA:1.10.132.20 68 186 1.0E-45 T 23-04-2016 IPR023584 Ribosome recycling factor domain RBRH_RS06455 a363b13938872f690590284257024441 186 Pfam PF01765 Ribosome recycling factor 21 184 2.7E-62 T 23-04-2016 IPR023584 Ribosome recycling factor domain RBRH_RS06455 a363b13938872f690590284257024441 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 1.8E-69 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RBRH_RS06455 a363b13938872f690590284257024441 186 PANTHER PTHR20982 6 186 1.0E-76 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RBRH_RS06455 a363b13938872f690590284257024441 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 27.403 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RBRH_RS06455 a363b13938872f690590284257024441 186 SUPERFAMILY SSF55194 5 185 7.59E-71 T 23-04-2016 IPR023584 Ribosome recycling factor domain RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 Pfam PF01515 Phosphate acetyl/butaryl transferase 434 755 4.1E-97 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 SMART SM00919 167 404 2.1E-131 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 SUPERFAMILY SSF53659 433 758 1.36E-89 T 23-04-2016 RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 Gene3D G3DSA:3.40.50.10750 575 732 6.8E-54 T 23-04-2016 RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 PANTHER PTHR23406 36 428 1.6E-157 T 23-04-2016 RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 SUPERFAMILY SSF51735 167 442 4.47E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 Pfam PF03949 Malic enzyme, NAD binding domain 169 363 2.9E-20 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 Gene3D G3DSA:3.40.50.10380 14 164 6.7E-50 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 PIRSF PIRSF036684 2 765 0.0 T 23-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 Pfam PF00390 Malic enzyme, N-terminal domain 24 153 3.4E-25 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 Gene3D G3DSA:3.40.50.720 165 443 2.6E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 SMART SM01274 22 155 1.8E-74 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RBRH_RS01575 eae8ac135d0d2738df22631bbf5e376f 770 SUPERFAMILY SSF53223 14 165 4.1E-50 T 23-04-2016 RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 SUPERFAMILY SSF55021 413 506 7.78E-26 T 23-04-2016 RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 PANTHER PTHR10314 3 362 6.5E-205 T 23-04-2016 RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 Gene3D G3DSA:3.40.1020.10 333 506 7.1E-58 T 23-04-2016 RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 SUPERFAMILY SSF53686 5 359 2.1E-100 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 506 2.0E-249 T 23-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 310 3.3E-80 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 PANTHER PTHR10314:SF30 3 362 6.5E-205 T 23-04-2016 RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 424 506 3.5E-21 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 323 412 3.9E-27 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RBRH_RS10880 59c770aeb97dd7e3cd439d33ff9c7970 507 Gene3D G3DSA:3.40.50.1100 70 328 4.8E-84 T 23-04-2016 RBRH_RS01665 48830ccb13705f30dea371bb350ce771 211 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 23-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RBRH_RS01665 48830ccb13705f30dea371bb350ce771 211 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 205 2.6E-73 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RBRH_RS01665 48830ccb13705f30dea371bb350ce771 211 SUPERFAMILY SSF51569 5 206 1.78E-63 T 23-04-2016 RBRH_RS01665 48830ccb13705f30dea371bb350ce771 211 PANTHER PTHR30246:SF0 4 208 2.0E-88 T 23-04-2016 RBRH_RS01665 48830ccb13705f30dea371bb350ce771 211 Pfam PF01081 KDPG and KHG aldolase 5 199 9.8E-65 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RBRH_RS01665 48830ccb13705f30dea371bb350ce771 211 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 23-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 RBRH_RS01665 48830ccb13705f30dea371bb350ce771 211 PANTHER PTHR30246 4 208 2.0E-88 T 23-04-2016 RBRH_RS01665 48830ccb13705f30dea371bb350ce771 211 Gene3D G3DSA:3.20.20.70 3 207 1.8E-70 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS03060 0fbec383879e2edf0a92e5ea481ed132 388 SUPERFAMILY SSF102114 64 306 1.31E-9 T 23-04-2016 RBRH_RS03060 0fbec383879e2edf0a92e5ea481ed132 388 Pfam PF04055 Radical SAM superfamily 85 262 6.5E-12 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS03060 0fbec383879e2edf0a92e5ea481ed132 388 PANTHER PTHR11228:SF26 27 327 1.8E-90 T 23-04-2016 RBRH_RS03060 0fbec383879e2edf0a92e5ea481ed132 388 PANTHER PTHR11228 27 327 1.8E-90 T 23-04-2016 RBRH_RS03060 0fbec383879e2edf0a92e5ea481ed132 388 SMART SM00729 80 307 8.0E-5 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS00130 32bf1b734526eccaba48141d43bb81b6 403 PANTHER PTHR35861 128 398 2.4E-46 T 23-04-2016 RBRH_RS00130 32bf1b734526eccaba48141d43bb81b6 403 Pfam PF04984 Phage tail sheath protein 182 398 2.2E-22 T 23-04-2016 IPR007067 Tail sheath protein RBRH_RS00130 32bf1b734526eccaba48141d43bb81b6 403 PANTHER PTHR35861:SF1 128 398 2.4E-46 T 23-04-2016 RBRH_RS08335 3c758f9845987ed8d11575c2caf7578b 188 Pfam PF09361 Phasin protein 7 106 2.1E-29 T 23-04-2016 IPR018968 Phasin RBRH_RS08335 3c758f9845987ed8d11575c2caf7578b 188 TIGRFAM TIGR01841 phasin: phasin family protein 27 114 1.1E-27 T 23-04-2016 IPR010127 Phasin, subfamily 1 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 9 465 48.412 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 256 272 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 PIRSF PIRSF001109 1 473 4.5E-188 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 13 472 2.4E-142 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 SMART SM00996 13 472 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 Gene3D G3DSA:3.40.50.1480 394 473 3.0E-36 T 23-04-2016 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 SUPERFAMILY SSF51735 234 393 2.51E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 85 99 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 PANTHER PTHR23420 184 473 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 PANTHER PTHR23420 9 148 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 SUPERFAMILY SSF52283 186 233 1.98E-112 T 23-04-2016 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 SUPERFAMILY SSF52283 394 473 1.98E-112 T 23-04-2016 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 SUPERFAMILY SSF52283 12 150 1.98E-112 T 23-04-2016 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 14 465 8.9E-184 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 Gene3D G3DSA:3.40.50.720 273 372 8.5E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 234 393 4.3E-82 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 SMART SM00997 234 393 7.0E-113 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 Gene3D G3DSA:3.40.50.1480 11 149 1.4E-120 T 23-04-2016 RBRH_RS11830 39029ee03364d98cc6abccc42facea26 473 Gene3D G3DSA:3.40.50.1480 185 272 1.4E-120 T 23-04-2016 RBRH_RS05620 27556d304d9e7762e21b880b9b4f1c90 521 Pfam PF13817 IS66 C-terminal element 471 508 9.7E-17 T 23-04-2016 RBRH_RS05620 27556d304d9e7762e21b880b9b4f1c90 521 Pfam PF13007 Transposase C of IS166 homeodomain 31 114 3.4E-12 T 23-04-2016 IPR024463 Transposase TnpC, homeodomain RBRH_RS05620 27556d304d9e7762e21b880b9b4f1c90 521 PANTHER PTHR33678:SF1 11 507 4.4E-121 T 23-04-2016 RBRH_RS05620 27556d304d9e7762e21b880b9b4f1c90 521 PANTHER PTHR33678 11 507 4.4E-121 T 23-04-2016 RBRH_RS05620 27556d304d9e7762e21b880b9b4f1c90 521 Pfam PF03050 Transposase IS66 family 179 464 5.2E-99 T 23-04-2016 IPR004291 Transposase, IS66 RBRH_RS05620 27556d304d9e7762e21b880b9b4f1c90 521 Pfam PF13005 zinc-finger binding domain of transposase IS66 121 163 2.4E-15 T 23-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 RBRH_RS01715 07240e4bfeed29c85fe58c5c11590a06 125 PRINTS PR01853 Bacterial YajC preprotein translocase signature 37 57 1.3E-13 T 23-04-2016 IPR003849 Preprotein translocase YajC RBRH_RS01715 07240e4bfeed29c85fe58c5c11590a06 125 PRINTS PR01853 Bacterial YajC preprotein translocase signature 75 93 1.3E-13 T 23-04-2016 IPR003849 Preprotein translocase YajC RBRH_RS01715 07240e4bfeed29c85fe58c5c11590a06 125 PANTHER PTHR33909:SF1 15 125 5.8E-31 T 23-04-2016 RBRH_RS01715 07240e4bfeed29c85fe58c5c11590a06 125 PANTHER PTHR33909 15 125 5.8E-31 T 23-04-2016 RBRH_RS01715 07240e4bfeed29c85fe58c5c11590a06 125 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 37 117 2.0E-27 T 23-04-2016 IPR003849 Preprotein translocase YajC RBRH_RS01715 07240e4bfeed29c85fe58c5c11590a06 125 SMART SM01323 35 117 1.2E-43 T 23-04-2016 IPR003849 Preprotein translocase YajC RBRH_RS01715 07240e4bfeed29c85fe58c5c11590a06 125 Pfam PF02699 Preprotein translocase subunit 42 114 1.1E-29 T 23-04-2016 IPR003849 Preprotein translocase YajC RBRH_RS00955 0aa4f7e66abba0f3c3c204a49c1fae1e 273 SUPERFAMILY SSF56219 13 267 6.15E-30 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RBRH_RS00955 0aa4f7e66abba0f3c3c204a49c1fae1e 273 PANTHER PTHR15822:SF7 108 270 3.8E-21 T 23-04-2016 RBRH_RS00955 0aa4f7e66abba0f3c3c204a49c1fae1e 273 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 21 257 5.8E-15 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RBRH_RS00955 0aa4f7e66abba0f3c3c204a49c1fae1e 273 Gene3D G3DSA:3.60.10.10 16 198 2.3E-10 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RBRH_RS00955 0aa4f7e66abba0f3c3c204a49c1fae1e 273 PANTHER PTHR15822 108 270 3.8E-21 T 23-04-2016 RBRH_RS11395 265c6c8fef485be11181d994d4f31936 295 Pfam PF00005 ABC transporter 41 189 7.1E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS11395 265c6c8fef485be11181d994d4f31936 295 Gene3D G3DSA:3.40.50.300 22 248 3.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11395 265c6c8fef485be11181d994d4f31936 295 PANTHER PTHR24220 25 264 2.7E-108 T 23-04-2016 RBRH_RS11395 265c6c8fef485be11181d994d4f31936 295 SUPERFAMILY SSF52540 22 251 1.33E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11395 265c6c8fef485be11181d994d4f31936 295 PANTHER PTHR24220:SF483 25 264 2.7E-108 T 23-04-2016 RBRH_RS11395 265c6c8fef485be11181d994d4f31936 295 SMART SM00382 48 245 6.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 Gene3D G3DSA:1.20.120.140 283 364 1.3E-27 T 23-04-2016 RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 SMART SM00382 352 531 3.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 Pfam PF00448 SRP54-type protein, GTPase domain 354 553 1.2E-70 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 PANTHER PTHR11564 253 552 5.6E-122 T 23-04-2016 RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 SMART SM00962 353 553 2.9E-108 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 282 553 58.999 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 Gene3D G3DSA:3.40.50.300 365 553 2.9E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 526 539 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 SUPERFAMILY SSF47364 258 332 1.44E-18 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 SUPERFAMILY SSF52540 352 552 5.78E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 SMART SM00963 263 339 4.2E-20 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 PANTHER PTHR11564:SF16 253 552 5.6E-122 T 23-04-2016 RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 Pfam PF02881 SRP54-type protein, helical bundle domain 272 332 2.6E-11 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS11105 28992c791e6a7a02ccc51f4824b38f39 553 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 282 552 2.1E-99 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 PANTHER PTHR23305 1 364 9.5E-208 T 23-04-2016 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 PIRSF PIRSF006641 1 364 7.3E-153 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 45.033 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 SUPERFAMILY SSF52540 3 302 1.64E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 Pfam PF01926 50S ribosome-binding GTPase 5 121 2.6E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 Gene3D G3DSA:3.10.20.30 267 364 5.6E-49 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 Gene3D G3DSA:3.40.50.300 202 266 2.4E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 Gene3D G3DSA:3.40.50.300 4 130 2.4E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 2.2E-39 T 23-04-2016 IPR013029 Domain of unknown function DUF933 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 1.3E-156 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 Gene3D G3DSA:1.10.150.300 131 201 2.2E-25 T 23-04-2016 IPR023192 TGS-like domain RBRH_RS05010 33981ece60c85c4f13c4b2fabcbdb717 364 SUPERFAMILY SSF81271 280 360 8.28E-36 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RBRH_RS07715 b671bb55139db00c729171bcfa15fa04 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RBRH_RS07715 b671bb55139db00c729171bcfa15fa04 266 PANTHER PTHR18966:SF208 28 261 4.8E-56 T 23-04-2016 RBRH_RS07715 b671bb55139db00c729171bcfa15fa04 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 258 1.6E-69 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RBRH_RS07715 b671bb55139db00c729171bcfa15fa04 266 PANTHER PTHR18966 28 261 4.8E-56 T 23-04-2016 RBRH_RS07715 b671bb55139db00c729171bcfa15fa04 266 SUPERFAMILY SSF53850 8 260 3.44E-75 T 23-04-2016 RBRH_RS07715 b671bb55139db00c729171bcfa15fa04 266 Gene3D G3DSA:3.40.190.10 36 125 1.4E-45 T 23-04-2016 RBRH_RS07715 b671bb55139db00c729171bcfa15fa04 266 Gene3D G3DSA:3.40.190.10 219 261 1.4E-45 T 23-04-2016 RBRH_RS07715 b671bb55139db00c729171bcfa15fa04 266 Gene3D G3DSA:3.40.190.10 126 205 4.1E-26 T 23-04-2016 RBRH_RS07715 b671bb55139db00c729171bcfa15fa04 266 SMART SM00062 40 260 6.0E-81 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RBRH_RS07715 b671bb55139db00c729171bcfa15fa04 266 SMART SM00079 40 259 7.4E-4 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RBRH_RS01130 f100f1b2c7bad8a69651758b5bf467af 169 SUPERFAMILY SSF49777 12 167 1.7E-42 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RBRH_RS01130 f100f1b2c7bad8a69651758b5bf467af 169 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 33 167 1.7E-34 T 23-04-2016 IPR005247 YbhB/YbcL RBRH_RS01130 f100f1b2c7bad8a69651758b5bf467af 169 Pfam PF01161 Phosphatidylethanolamine-binding protein 37 167 7.3E-32 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RBRH_RS01130 f100f1b2c7bad8a69651758b5bf467af 169 PANTHER PTHR30289 10 169 1.3E-49 T 23-04-2016 RBRH_RS01130 f100f1b2c7bad8a69651758b5bf467af 169 PANTHER PTHR30289:SF0 10 169 1.3E-49 T 23-04-2016 RBRH_RS01130 f100f1b2c7bad8a69651758b5bf467af 169 Gene3D G3DSA:3.90.280.10 12 169 8.2E-47 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 4.4E-7 T 23-04-2016 RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 188 203 4.4E-7 T 23-04-2016 RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 PANTHER PTHR10617:SF107 4 480 2.2E-252 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 Pfam PF13450 NAD(P)-binding Rossmann-like domain 22 69 2.2E-7 T 23-04-2016 RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 453 554 2.8E-49 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 Gene3D G3DSA:3.50.50.60 16 291 5.3E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 PANTHER PTHR10617 4 480 2.2E-252 T 23-04-2016 RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 SUPERFAMILY SSF51905 12 220 5.11E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 SUPERFAMILY SSF51905 316 455 5.11E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 SUPERFAMILY SSF54862 457 557 1.32E-27 T 23-04-2016 RBRH_RS05245 7d29b4da717470a64c1103bb0806d862 557 SUPERFAMILY SSF54373 221 315 3.73E-37 T 23-04-2016 RBRH_RS03525 129c823c7115d305554a5565ab50d12c 135 Pfam PF00717 Peptidase S24-like 52 118 3.7E-12 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B RBRH_RS03525 129c823c7115d305554a5565ab50d12c 135 SUPERFAMILY SSF51306 5 135 1.19E-26 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RBRH_RS03525 129c823c7115d305554a5565ab50d12c 135 PANTHER PTHR40661 2 135 3.6E-17 T 23-04-2016 RBRH_RS03525 129c823c7115d305554a5565ab50d12c 135 Gene3D G3DSA:2.10.109.10 7 135 2.7E-22 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RBRH_RS04030 4923d06c23b01b8249caa0335b8cbc56 243 Pfam PF13489 Methyltransferase domain 21 173 6.5E-16 T 23-04-2016 RBRH_RS04030 4923d06c23b01b8249caa0335b8cbc56 243 PANTHER PTHR10108:SF779 12 124 7.5E-16 T 23-04-2016 RBRH_RS04030 4923d06c23b01b8249caa0335b8cbc56 243 SUPERFAMILY SSF53335 20 184 1.05E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS04030 4923d06c23b01b8249caa0335b8cbc56 243 PANTHER PTHR10108 12 124 7.5E-16 T 23-04-2016 RBRH_RS04030 4923d06c23b01b8249caa0335b8cbc56 243 Gene3D G3DSA:3.40.50.150 19 183 8.7E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 8 481 1.4E-171 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 PANTHER PTHR23429:SF0 8 480 4.5E-201 T 23-04-2016 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 SUPERFAMILY SSF51735 5 185 2.44E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 PANTHER PTHR23429 8 480 4.5E-201 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 172 178 - T 23-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 Gene3D G3DSA:3.30.360.10 182 481 2.5E-122 T 23-04-2016 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 482 79.367 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 SUPERFAMILY SSF55347 172 481 2.13E-114 T 23-04-2016 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 323 349 2.4E-48 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 138 151 2.4E-48 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 162 190 2.4E-48 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 214 231 2.4E-48 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 232 248 2.4E-48 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 Gene3D G3DSA:3.40.50.720 7 181 9.6E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 PIRSF PIRSF000110 2 484 2.0E-163 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 184 480 1.6E-113 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS09680 5296d0349587c2321720c9e48a665ea6 485 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 182 4.4E-53 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 Gene3D G3DSA:3.40.605.10 646 886 1.8E-70 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 Gene3D G3DSA:1.20.5.550 86 137 1.5E-24 T 23-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 Pfam PF01619 Proline dehydrogenase 265 561 2.7E-99 T 23-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 899 910 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 SUPERFAMILY SSF47598 4 45 4.08E-9 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 PIRSF PIRSF000197 73 1307 0.0 T 23-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 Gene3D G3DSA:3.20.20.220 256 605 3.8E-120 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 Gene3D G3DSA:3.40.309.10 887 1074 8.4E-44 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 SUPERFAMILY SSF51730 257 606 7.06E-122 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 PANTHER PTHR11699:SF18 615 1092 3.0E-176 T 23-04-2016 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 PANTHER PTHR11699 615 1092 3.0E-176 T 23-04-2016 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 143 254 2.1E-46 T 23-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 Pfam PF00171 Aldehyde dehydrogenase family 652 1089 1.3E-112 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 SUPERFAMILY SSF53720 618 1095 7.85E-128 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 SUPERFAMILY SSF81935 87 256 5.62E-64 T 23-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 Gene3D G3DSA:1.10.2060.10 138 255 1.8E-53 T 23-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RBRH_RS00580 7270d3f647e6232c29b0841d5c5a4bfc 1307 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 599 1096 9.9E-238 T 23-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 TIGRFAM TIGR01807 CM_P2: chorismate mutase 9 82 3.7E-24 T 23-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 306 313 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 PANTHER PTHR21022 1 358 1.0E-124 T 23-04-2016 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 Gene3D G3DSA:3.40.190.10 90 178 4.0E-34 T 23-04-2016 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 SUPERFAMILY SSF53850 93 272 2.17E-56 T 23-04-2016 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 PANTHER PTHR21022:SF0 1 358 1.0E-124 T 23-04-2016 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 Pfam PF00800 Prephenate dehydratase 94 268 3.1E-60 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 SUPERFAMILY SSF55021 263 358 2.33E-27 T 23-04-2016 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 Gene3D G3DSA:3.40.190.10 179 256 1.8E-23 T 23-04-2016 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 Gene3D G3DSA:3.30.70.260 274 359 4.8E-31 T 23-04-2016 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 SUPERFAMILY SSF48600 9 95 9.52E-23 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 Pfam PF01842 ACT domain 279 344 1.7E-9 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 Pfam PF01817 Chorismate mutase type II 13 90 5.9E-25 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 SMART SM00830 13 92 1.3E-29 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 PIRSF PIRSF001500 2 360 1.1E-138 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RBRH_RS02950 75fb7b34833ce5a71c9aca28b2b86e85 360 Gene3D G3DSA:1.20.59.10 5 89 1.5E-24 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 Gene3D G3DSA:1.10.3090.10 288 515 2.0E-52 T 23-04-2016 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 PANTHER PTHR13734 99 375 1.7E-95 T 23-04-2016 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 315 375 1.4E-19 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 71 546 36.707 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 Gene3D G3DSA:3.30.460.10 237 287 1.9E-47 T 23-04-2016 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 Gene3D G3DSA:3.30.460.10 118 205 1.9E-47 T 23-04-2016 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 Pfam PF12626 Polymerase A arginine-rich C-terminus 429 542 2.0E-43 T 23-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 PANTHER PTHR13734:SF47 99 375 1.7E-95 T 23-04-2016 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 105 551 2.2E-148 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 Pfam PF01743 Poly A polymerase head domain 136 288 8.4E-33 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 SUPERFAMILY SSF81891 286 520 2.75E-53 T 23-04-2016 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 SUPERFAMILY SSF81301 233 285 3.05E-36 T 23-04-2016 RBRH_RS01910 b0a0ae2706bfdcb4f6488c3c7be3efb7 572 SUPERFAMILY SSF81301 110 199 3.05E-36 T 23-04-2016 RBRH_RS04750 e60a9da3a3971c8d3dbc9d276e5ba7d1 242 Pfam PF01634 ATP phosphoribosyltransferase 64 219 2.5E-50 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RBRH_RS04750 e60a9da3a3971c8d3dbc9d276e5ba7d1 242 PANTHER PTHR21403:SF3 15 222 1.3E-84 T 23-04-2016 RBRH_RS04750 e60a9da3a3971c8d3dbc9d276e5ba7d1 242 SUPERFAMILY SSF53850 15 220 1.17E-66 T 23-04-2016 RBRH_RS04750 e60a9da3a3971c8d3dbc9d276e5ba7d1 242 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 15 200 3.1E-60 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RBRH_RS04750 e60a9da3a3971c8d3dbc9d276e5ba7d1 242 Gene3D G3DSA:3.40.190.10 15 158 1.4E-43 T 23-04-2016 RBRH_RS04750 e60a9da3a3971c8d3dbc9d276e5ba7d1 242 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 159 180 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RBRH_RS04750 e60a9da3a3971c8d3dbc9d276e5ba7d1 242 PANTHER PTHR21403 15 222 1.3E-84 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RBRH_RS04750 e60a9da3a3971c8d3dbc9d276e5ba7d1 242 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 14 224 56.164 T 23-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 SMART SM00382 41 243 1.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 PANTHER PTHR11564 1 297 1.6E-165 T 23-04-2016 RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 SUPERFAMILY SSF52540 35 240 1.32E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 SUPERFAMILY SSF47446 240 301 9.48E-16 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 Gene3D G3DSA:1.10.260.30 271 301 3.6E-7 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 PANTHER PTHR11564:SF7 1 297 1.6E-165 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 Pfam PF02978 Signal peptide binding domain 271 300 1.1E-5 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 Gene3D G3DSA:3.40.50.300 36 239 4.3E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 211 224 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 Pfam PF00448 SRP54-type protein, GTPase domain 42 238 5.2E-72 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS13385 a9dc0702f2b7513d281bb5fd49e7f897 304 SMART SM00962 42 238 3.6E-115 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 SMART SM00304 167 219 5.2E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 275 7.2E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 5.6E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 5.6E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 SMART SM00388 220 278 6.5E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 Gene3D G3DSA:1.10.287.130 210 273 1.3E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 Gene3D G3DSA:3.30.565.10 285 427 1.6E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 SUPERFAMILY SSF55874 280 427 8.25E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 PANTHER PTHR24423 149 406 2.7E-38 T 23-04-2016 RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 SMART SM00387 318 427 4.1E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 SUPERFAMILY SSF47384 203 274 2.35E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 424 5.1E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS09645 3ec84c732e264e4667bef2bb5a139874 432 Pfam PF00672 HAMP domain 150 215 9.9E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RBRH_RS05730 f79558c74171d8b74c2d98a219dc55f8 108 PANTHER PTHR33449:SF1 1 108 1.1E-48 T 23-04-2016 RBRH_RS05730 f79558c74171d8b74c2d98a219dc55f8 108 PANTHER PTHR33449 1 108 1.1E-48 T 23-04-2016 RBRH_RS05730 f79558c74171d8b74c2d98a219dc55f8 108 SUPERFAMILY SSF82607 10 102 1.57E-36 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RBRH_RS05730 f79558c74171d8b74c2d98a219dc55f8 108 Gene3D G3DSA:3.30.1310.10 1 108 1.1E-50 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RBRH_RS05730 f79558c74171d8b74c2d98a219dc55f8 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.562 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RBRH_RS05730 f79558c74171d8b74c2d98a219dc55f8 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 2.9E-36 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RBRH_RS05730 f79558c74171d8b74c2d98a219dc55f8 108 PIRSF PIRSF004555 2 108 2.5E-39 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RBRH_RS05730 f79558c74171d8b74c2d98a219dc55f8 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 3.9E-34 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 4.3E-34 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 SUPERFAMILY SSF52402 3 184 5.37E-54 T 23-04-2016 RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 Gene3D G3DSA:3.40.50.1220 185 310 7.0E-59 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 PIRSF PIRSF000089 1 310 2.0E-102 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 Gene3D G3DSA:3.40.50.620 1 182 9.7E-62 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 SUPERFAMILY SSF52467 189 309 4.85E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 SMART SM00893 3 182 1.8E-52 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 23-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 PANTHER PTHR10909 104 308 6.2E-113 T 23-04-2016 RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 PANTHER PTHR10909:SF294 104 308 6.2E-113 T 23-04-2016 RBRH_RS03045 95db58f3fb09eee2fd3e5d79333b3475 310 Pfam PF01012 Electron transfer flavoprotein domain 4 171 4.8E-38 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RBRH_RS11275 7a5e1eb6446c532c18c64bcc2e2b337c 257 PANTHER PTHR10953:SF158 1 247 2.0E-86 T 23-04-2016 RBRH_RS11275 7a5e1eb6446c532c18c64bcc2e2b337c 257 Gene3D G3DSA:3.40.50.720 3 247 9.1E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS11275 7a5e1eb6446c532c18c64bcc2e2b337c 257 Pfam PF00899 ThiF family 9 243 4.4E-61 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RBRH_RS11275 7a5e1eb6446c532c18c64bcc2e2b337c 257 PANTHER PTHR10953 1 247 2.0E-86 T 23-04-2016 RBRH_RS11275 7a5e1eb6446c532c18c64bcc2e2b337c 257 SUPERFAMILY SSF69572 2 247 9.16E-84 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RBRH_RS09970 f12ecadfff473e59b5af4572de0b7650 293 SMART SM00563 68 180 5.6E-33 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RBRH_RS09970 f12ecadfff473e59b5af4572de0b7650 293 Gene3D G3DSA:3.40.1130.10 69 182 1.0E-11 T 23-04-2016 RBRH_RS09970 f12ecadfff473e59b5af4572de0b7650 293 Pfam PF01553 Acyltransferase 57 176 1.4E-23 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RBRH_RS09970 f12ecadfff473e59b5af4572de0b7650 293 PANTHER PTHR10434 21 181 1.5E-39 T 23-04-2016 RBRH_RS09970 f12ecadfff473e59b5af4572de0b7650 293 SUPERFAMILY SSF69593 46 246 4.58E-27 T 23-04-2016 RBRH_RS09970 f12ecadfff473e59b5af4572de0b7650 293 PANTHER PTHR10434:SF8 21 181 1.5E-39 T 23-04-2016 RBRH_RS05525 8801b956cbcc4aec515cc957c13d7d63 305 Pfam PF02678 Pirin 39 142 8.7E-35 T 23-04-2016 IPR003829 Pirin, N-terminal domain RBRH_RS05525 8801b956cbcc4aec515cc957c13d7d63 305 PIRSF PIRSF006232 18 305 1.0E-97 T 23-04-2016 IPR012093 Pirin RBRH_RS05525 8801b956cbcc4aec515cc957c13d7d63 305 Gene3D G3DSA:2.60.120.10 19 274 1.9E-83 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RBRH_RS05525 8801b956cbcc4aec515cc957c13d7d63 305 PANTHER PTHR13903 18 305 3.0E-124 T 23-04-2016 IPR012093 Pirin RBRH_RS05525 8801b956cbcc4aec515cc957c13d7d63 305 Pfam PF05726 Pirin C-terminal cupin domain 199 301 4.7E-29 T 23-04-2016 IPR008778 Pirin, C-terminal domain RBRH_RS05525 8801b956cbcc4aec515cc957c13d7d63 305 PANTHER PTHR13903:SF13 18 305 3.0E-124 T 23-04-2016 RBRH_RS05525 8801b956cbcc4aec515cc957c13d7d63 305 SUPERFAMILY SSF51182 21 303 1.81E-85 T 23-04-2016 IPR011051 RmlC-like cupin domain RBRH_RS02520 d7dcfdc23fe8f11e28148cfabfbaf343 207 SUPERFAMILY SSF52540 1 195 1.01E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02520 d7dcfdc23fe8f11e28148cfabfbaf343 207 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 150 4.0E-21 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RBRH_RS02520 d7dcfdc23fe8f11e28148cfabfbaf343 207 Gene3D G3DSA:3.40.50.300 2 203 1.3E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02520 d7dcfdc23fe8f11e28148cfabfbaf343 207 PANTHER PTHR13696 1 197 6.0E-24 T 23-04-2016 RBRH_RS01815 027ccb197ad4ff9b215e799fa50b60c0 182 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 23 178 2.0E-58 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RBRH_RS01815 027ccb197ad4ff9b215e799fa50b60c0 182 Gene3D G3DSA:1.20.1200.10 17 180 3.7E-65 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RBRH_RS01815 027ccb197ad4ff9b215e799fa50b60c0 182 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 178 9.9E-62 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RBRH_RS01815 027ccb197ad4ff9b215e799fa50b60c0 182 SUPERFAMILY SSF89028 7 178 2.55E-59 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RBRH_RS01815 027ccb197ad4ff9b215e799fa50b60c0 182 PANTHER PTHR12213:SF0 4 181 5.1E-70 T 23-04-2016 RBRH_RS01815 027ccb197ad4ff9b215e799fa50b60c0 182 PANTHER PTHR12213 4 181 5.1E-70 T 23-04-2016 RBRH_RS01815 027ccb197ad4ff9b215e799fa50b60c0 182 Pfam PF01923 Cobalamin adenosyltransferase 8 165 1.4E-56 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RBRH_RS02875 7a3e5a923981688d8cdbf59851bef093 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 6.4E-20 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RBRH_RS02875 7a3e5a923981688d8cdbf59851bef093 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 16.162 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RBRH_RS02875 7a3e5a923981688d8cdbf59851bef093 126 PANTHER PTHR28259 1 125 5.4E-29 T 23-04-2016 RBRH_RS02875 7a3e5a923981688d8cdbf59851bef093 126 TIGRFAM TIGR00494 crcB: protein CrcB 7 118 7.5E-27 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RBRH_RS00125 8115f6b932ea01cde116c9f652863f80 311 PANTHER PTHR35861 107 306 4.1E-43 T 23-04-2016 RBRH_RS00125 8115f6b932ea01cde116c9f652863f80 311 PANTHER PTHR35861:SF1 107 306 4.1E-43 T 23-04-2016 RBRH_RS00125 8115f6b932ea01cde116c9f652863f80 311 Pfam PF04984 Phage tail sheath protein 107 306 4.9E-27 T 23-04-2016 IPR007067 Tail sheath protein RBRH_RS04495 769a7736223e783c96064341202cc373 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 23-04-2016 IPR030659 SecY conserved site RBRH_RS04495 769a7736223e783c96064341202cc373 444 PIRSF PIRSF004557 6 438 1.9E-125 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RBRH_RS04495 769a7736223e783c96064341202cc373 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 11 431 29.342 T 23-04-2016 IPR026593 Protein translocase subunit SecY RBRH_RS04495 769a7736223e783c96064341202cc373 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 313 335 9.7E-95 T 23-04-2016 RBRH_RS04495 769a7736223e783c96064341202cc373 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 24 42 9.7E-95 T 23-04-2016 RBRH_RS04495 769a7736223e783c96064341202cc373 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 76 96 9.7E-95 T 23-04-2016 RBRH_RS04495 769a7736223e783c96064341202cc373 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 9.7E-95 T 23-04-2016 RBRH_RS04495 769a7736223e783c96064341202cc373 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 9.7E-95 T 23-04-2016 RBRH_RS04495 769a7736223e783c96064341202cc373 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 400 418 9.7E-95 T 23-04-2016 RBRH_RS04495 769a7736223e783c96064341202cc373 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 117 140 9.7E-95 T 23-04-2016 RBRH_RS04495 769a7736223e783c96064341202cc373 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 9.7E-95 T 23-04-2016 RBRH_RS04495 769a7736223e783c96064341202cc373 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 368 386 9.7E-95 T 23-04-2016 RBRH_RS04495 769a7736223e783c96064341202cc373 444 Pfam PF00344 SecY translocase 77 415 3.0E-115 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RBRH_RS04495 769a7736223e783c96064341202cc373 444 ProSitePatterns PS00755 Protein secY signature 1. 77 96 - T 23-04-2016 IPR030659 SecY conserved site RBRH_RS04495 769a7736223e783c96064341202cc373 444 PANTHER PTHR10906:SF2 19 444 5.1E-216 T 23-04-2016 RBRH_RS04495 769a7736223e783c96064341202cc373 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 427 6.3E-130 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RBRH_RS04495 769a7736223e783c96064341202cc373 444 SUPERFAMILY SSF103491 14 422 1.7E-131 T 23-04-2016 IPR023201 SecY subunit domain RBRH_RS04495 769a7736223e783c96064341202cc373 444 PANTHER PTHR10906 19 444 5.1E-216 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RBRH_RS04495 769a7736223e783c96064341202cc373 444 Gene3D G3DSA:1.10.3370.10 16 435 2.7E-166 T 23-04-2016 IPR023201 SecY subunit domain RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 25 430 3.8E-80 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 Pfam PF07690 Major Facilitator Superfamily 27 417 1.5E-46 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 SUPERFAMILY SSF103473 8 205 1.24E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 SUPERFAMILY SSF103473 256 470 1.24E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 PANTHER PTHR23501 16 467 1.8E-209 T 23-04-2016 RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 Gene3D G3DSA:1.20.1250.20 22 200 1.0E-27 T 23-04-2016 RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 Gene3D G3DSA:1.20.1250.20 270 469 1.1E-15 T 23-04-2016 RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 211 229 2.2E-9 T 23-04-2016 RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 25 49 2.2E-9 T 23-04-2016 RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 408 427 2.2E-9 T 23-04-2016 RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 116 136 2.2E-9 T 23-04-2016 RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 2.2E-9 T 23-04-2016 RBRH_RS02185 de430183df1a0a8143d46273f4a80bd6 482 PANTHER PTHR23501:SF1 16 467 1.8E-209 T 23-04-2016 RBRH_RS01045 fc6dc6f3f563ac49110f2ef5658d5ca2 584 SUPERFAMILY SSF53067 9 94 4.1E-17 T 23-04-2016 RBRH_RS01045 fc6dc6f3f563ac49110f2ef5658d5ca2 584 SUPERFAMILY SSF53067 157 361 4.1E-17 T 23-04-2016 RBRH_RS01045 fc6dc6f3f563ac49110f2ef5658d5ca2 584 Pfam PF02543 Carbamoyltransferase N-terminus 11 359 2.9E-68 T 23-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 RBRH_RS01045 fc6dc6f3f563ac49110f2ef5658d5ca2 584 PANTHER PTHR34847 8 584 1.5E-120 T 23-04-2016 RBRH_RS01045 fc6dc6f3f563ac49110f2ef5658d5ca2 584 Pfam PF16861 Carbamoyltransferase C-terminus 410 582 3.2E-72 T 23-04-2016 IPR031730 Carbamoyltransferase, C-terminal RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 PRINTS PR00184 Neisseria sp. porin signature 155 172 1.6E-10 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 PRINTS PR00184 Neisseria sp. porin signature 53 78 1.6E-10 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 PRINTS PR00184 Neisseria sp. porin signature 324 348 1.6E-10 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.6E-10 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 302 319 1.6E-10 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 184 196 1.6E-10 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 1.6E-10 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 156 167 1.6E-10 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 SUPERFAMILY SSF56935 17 394 2.88E-95 T 23-04-2016 RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 Pfam PF13609 Gram-negative porin 7 349 1.7E-51 T 23-04-2016 RBRH_RS01235 06eea40e115c12886823a5c5704fe9f4 394 Gene3D G3DSA:2.40.160.10 21 394 1.7E-111 T 23-04-2016 IPR023614 Porin domain RBRH_RS08200 a046294378fd51ac29318ddd3f9088d4 284 PANTHER PTHR21057:SF2 1 284 2.1E-155 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RBRH_RS08200 a046294378fd51ac29318ddd3f9088d4 284 Gene3D G3DSA:3.20.20.70 11 279 4.9E-110 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS08200 a046294378fd51ac29318ddd3f9088d4 284 SUPERFAMILY SSF51569 2 277 2.75E-98 T 23-04-2016 RBRH_RS08200 a046294378fd51ac29318ddd3f9088d4 284 PANTHER PTHR21057 1 284 2.1E-155 T 23-04-2016 RBRH_RS08200 a046294378fd51ac29318ddd3f9088d4 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 274 2.6E-119 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RBRH_RS08200 a046294378fd51ac29318ddd3f9088d4 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 276 51.354 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RBRH_RS08200 a046294378fd51ac29318ddd3f9088d4 284 Pfam PF00793 DAHP synthetase I family 6 273 1.4E-64 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RBRH_RS01805 958cbad0b505778bff57ce1ec94d25d1 497 Gene3D G3DSA:1.10.45.10 430 468 1.1E-7 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RBRH_RS01805 958cbad0b505778bff57ce1ec94d25d1 497 Gene3D G3DSA:3.30.465.10 109 229 1.7E-31 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RBRH_RS01805 958cbad0b505778bff57ce1ec94d25d1 497 SUPERFAMILY SSF56176 18 229 3.6E-68 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS01805 958cbad0b505778bff57ce1ec94d25d1 497 PANTHER PTHR11748:SF78 6 483 1.7E-178 T 23-04-2016 RBRH_RS01805 958cbad0b505778bff57ce1ec94d25d1 497 Pfam PF02913 FAD linked oxidases, C-terminal domain 228 468 9.0E-56 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RBRH_RS01805 958cbad0b505778bff57ce1ec94d25d1 497 PANTHER PTHR11748 6 483 1.7E-178 T 23-04-2016 RBRH_RS01805 958cbad0b505778bff57ce1ec94d25d1 497 Gene3D G3DSA:3.30.43.10 9 108 1.8E-28 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RBRH_RS01805 958cbad0b505778bff57ce1ec94d25d1 497 Pfam PF01565 FAD binding domain 54 192 3.6E-40 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RBRH_RS01805 958cbad0b505778bff57ce1ec94d25d1 497 SUPERFAMILY SSF55103 203 472 1.08E-68 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RBRH_RS16305 cfbfd298527b46ddc1835ef4a8074d1b 146 Pfam PF01613 Flavin reductase like domain 79 142 1.3E-7 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RBRH_RS16305 cfbfd298527b46ddc1835ef4a8074d1b 146 SUPERFAMILY SSF50475 78 143 9.81E-13 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RBRH_RS16305 cfbfd298527b46ddc1835ef4a8074d1b 146 Gene3D G3DSA:2.30.110.10 79 140 5.9E-12 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RBRH_RS08440 c070409141792084721648dac325f7f0 314 SUPERFAMILY SSF53955 157 306 2.0E-13 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS08440 c070409141792084721648dac325f7f0 314 Gene3D G3DSA:1.10.530.10 143 307 3.6E-11 T 23-04-2016 RBRH_RS08440 c070409141792084721648dac325f7f0 314 Pfam PF01464 Transglycosylase SLT domain 174 268 5.3E-5 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RBRH_RS02925 804c02508219ff78e3065db7dc4eba99 234 Gene3D G3DSA:3.40.50.150 19 213 1.7E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS02925 804c02508219ff78e3065db7dc4eba99 234 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 6 233 37.721 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RBRH_RS02925 804c02508219ff78e3065db7dc4eba99 234 PANTHER PTHR10108:SF910 3 228 4.1E-108 T 23-04-2016 RBRH_RS02925 804c02508219ff78e3065db7dc4eba99 234 Pfam PF13489 Methyltransferase domain 48 199 1.1E-23 T 23-04-2016 RBRH_RS02925 804c02508219ff78e3065db7dc4eba99 234 SUPERFAMILY SSF53335 11 229 1.27E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS02925 804c02508219ff78e3065db7dc4eba99 234 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 227 6.0E-84 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RBRH_RS02925 804c02508219ff78e3065db7dc4eba99 234 PANTHER PTHR10108 3 228 4.1E-108 T 23-04-2016 RBRH_RS11915 8f8d4ba491291a51b862b688eebeac3d 350 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 183 4.3E-56 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RBRH_RS11915 8f8d4ba491291a51b862b688eebeac3d 350 Gene3D G3DSA:3.30.1220.10 235 350 3.8E-41 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RBRH_RS11915 8f8d4ba491291a51b862b688eebeac3d 350 PANTHER PTHR13748 1 350 1.1E-127 T 23-04-2016 RBRH_RS11915 8f8d4ba491291a51b862b688eebeac3d 350 SUPERFAMILY SSF90002 255 349 6.15E-25 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RBRH_RS11915 8f8d4ba491291a51b862b688eebeac3d 350 Gene3D G3DSA:3.40.50.300 1 203 1.1E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11915 8f8d4ba491291a51b862b688eebeac3d 350 SUPERFAMILY SSF52540 2 202 5.4E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11915 8f8d4ba491291a51b862b688eebeac3d 350 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 255 349 2.2E-21 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RBRH_RS11915 8f8d4ba491291a51b862b688eebeac3d 350 PANTHER PTHR13748:SF43 1 350 1.1E-127 T 23-04-2016 RBRH_RS11915 8f8d4ba491291a51b862b688eebeac3d 350 SMART SM00833 255 349 1.2E-17 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 113 124 - T 23-04-2016 IPR018215 ClpP, Ser active site RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 PANTHER PTHR10381:SF22 26 217 1.5E-136 T 23-04-2016 RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 PRINTS PR00127 Clp protease catalytic subunit P signature 191 210 9.8E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 PRINTS PR00127 Clp protease catalytic subunit P signature 82 102 9.8E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 PRINTS PR00127 Clp protease catalytic subunit P signature 113 130 9.8E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 PRINTS PR00127 Clp protease catalytic subunit P signature 42 57 9.8E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 PRINTS PR00127 Clp protease catalytic subunit P signature 134 153 9.8E-54 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 Pfam PF00574 Clp protease 36 215 2.1E-89 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 26 216 45.37 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 SUPERFAMILY SSF52096 35 215 3.58E-75 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 Gene3D G3DSA:3.90.226.10 26 215 2.1E-89 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 25 215 1.7E-107 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 135 148 - T 23-04-2016 IPR033135 ClpP, histidine active site RBRH_RS07150 6d5ea9f092cca708b165e84e6312e3d1 217 PANTHER PTHR10381 26 217 1.5E-136 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RBRH_RS08940 2fa10ed6daeedca063dab66ce0dd7977 151 PIRSF PIRSF032131 1 148 8.1E-47 T 23-04-2016 IPR009562 Protein of unknown function DUF1178 RBRH_RS08940 2fa10ed6daeedca063dab66ce0dd7977 151 Pfam PF06676 Protein of unknown function (DUF1178) 1 143 5.1E-52 T 23-04-2016 IPR009562 Protein of unknown function DUF1178 RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 PANTHER PTHR10937 1 605 5.6E-300 T 23-04-2016 RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 PANTHER PTHR10937:SF0 1 605 5.6E-300 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 Pfam PF13522 Glutamine amidotransferase domain 64 188 7.4E-23 T 23-04-2016 RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 Gene3D G3DSA:3.40.50.10490 242 438 1.6E-69 T 23-04-2016 RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 Gene3D G3DSA:3.60.20.10 2 236 2.2E-73 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 Gene3D G3DSA:3.40.50.10490 439 605 9.8E-65 T 23-04-2016 RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 SUPERFAMILY SSF56235 2 232 1.29E-68 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 SUPERFAMILY SSF53697 243 605 1.86E-109 T 23-04-2016 RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 605 4.9E-244 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 605 38.563 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 Pfam PF01380 SIS domain 290 413 7.3E-27 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RBRH_RS01000 655acda5e0b57f94c698455d47948463 605 Pfam PF01380 SIS domain 458 586 1.5E-24 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RBRH_RS11420 56c453405fe1ca9acf74b3c37f02a214 292 Gene3D G3DSA:1.10.620.20 13 187 2.6E-24 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RBRH_RS11420 56c453405fe1ca9acf74b3c37f02a214 292 SUPERFAMILY SSF47240 7 279 1.17E-50 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 19 30 3.9E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 3.9E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 115 128 3.9E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 22 201 1.4E-31 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 106 200 1.2E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 PANTHER PTHR18901:SF24 20 228 3.7E-90 T 23-04-2016 RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 PANTHER PTHR18901 20 228 3.7E-90 T 23-04-2016 RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 22 230 4.0E-53 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 SUPERFAMILY SSF56784 20 231 1.33E-57 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 116 196 3.6E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 Gene3D G3DSA:3.40.50.1000 99 231 1.0E-41 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 Gene3D G3DSA:3.40.50.1000 17 35 1.0E-41 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS02920 611679aeb84457598dcc6326528904d8 237 Gene3D G3DSA:1.10.150.240 36 98 2.7E-8 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SUPERFAMILY SSF52777 2107 2344 4.45E-25 T 23-04-2016 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SMART SM00825 Beta-ketoacyl synthase 788 1202 4.0E-128 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SUPERFAMILY SSF52777 1470 1665 1.22E-17 T 23-04-2016 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Pfam PF00550 Phosphopantetheine attachment site 682 748 1.7E-6 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Pfam PF00550 Phosphopantetheine attachment site 1380 1443 9.2E-7 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SUPERFAMILY SSF53901 783 1139 2.36E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SUPERFAMILY SSF53901 1178 1196 2.36E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1147 1259 2.0E-13 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Pfam PF00668 Condensation domain 1472 1756 8.6E-38 T 23-04-2016 IPR001242 Condensation domain RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Pfam PF00668 Condensation domain 1936 2204 8.1E-21 T 23-04-2016 IPR001242 Condensation domain RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Pfam PF08415 Nonribosomal peptide synthase 1787 1844 1.2E-9 T 23-04-2016 IPR013624 Non-ribosomal peptide synthetase RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SUPERFAMILY SSF47336 1380 1480 9.29E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1026 1139 2.8E-27 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SUPERFAMILY SSF47336 679 799 2.09E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Gene3D G3DSA:1.10.1200.10 1381 1447 2.9E-4 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Gene3D G3DSA:1.10.1200.10 679 753 7.5E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 789 1016 2.6E-63 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 PANTHER PTHR11712 704 1282 8.6E-158 T 23-04-2016 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SUPERFAMILY SSF52777 1652 1891 1.11E-30 T 23-04-2016 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 PANTHER PTHR11712:SF285 704 1282 8.6E-158 T 23-04-2016 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SUPERFAMILY SSF52777 1939 2099 1.0E-19 T 23-04-2016 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SUPERFAMILY SSF55729 462 591 1.81E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Gene3D G3DSA:3.40.47.10 1028 1201 1.0E-43 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Gene3D G3DSA:3.40.47.10 788 1027 2.4E-76 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 Gene3D G3DSA:3.40.630.30 465 640 5.1E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SMART SM00823 Phosphopantetheine attachment site 1377 1450 0.072 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07345 6ee8f4f6cd419e645c0e6fb71302f1dc 2360 SMART SM00823 Phosphopantetheine attachment site 680 752 7.9E-6 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS12000 32c9e7b6ef76d6cc3961c329b2c1de05 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 99 19.823 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RBRH_RS12000 32c9e7b6ef76d6cc3961c329b2c1de05 99 PANTHER PTHR15004:SF0 1 99 2.9E-22 T 23-04-2016 RBRH_RS12000 32c9e7b6ef76d6cc3961c329b2c1de05 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 99 1.6E-27 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RBRH_RS12000 32c9e7b6ef76d6cc3961c329b2c1de05 99 PANTHER PTHR15004 1 99 2.9E-22 T 23-04-2016 RBRH_RS12000 32c9e7b6ef76d6cc3961c329b2c1de05 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 22 94 7.1E-16 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RBRH_RS12000 32c9e7b6ef76d6cc3961c329b2c1de05 99 SUPERFAMILY SSF141000 3 97 3.4E-24 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RBRH_RS11685 340bd3a57173b4cfb85284a8f5fb6b44 215 PANTHER PTHR11935:SF115 1 210 5.2E-113 T 23-04-2016 RBRH_RS11685 340bd3a57173b4cfb85284a8f5fb6b44 215 SMART SM00849 12 192 2.5E-38 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS11685 340bd3a57173b4cfb85284a8f5fb6b44 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 2.3E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS11685 340bd3a57173b4cfb85284a8f5fb6b44 215 Gene3D G3DSA:3.60.15.10 4 210 8.0E-59 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS11685 340bd3a57173b4cfb85284a8f5fb6b44 215 PANTHER PTHR11935 1 210 5.2E-113 T 23-04-2016 RBRH_RS11685 340bd3a57173b4cfb85284a8f5fb6b44 215 SUPERFAMILY SSF56281 2 208 7.58E-58 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS12115 f8d3d0573da75c5729fb24ced9403b1d 541 SUPERFAMILY SSF102405 93 299 8.7E-44 T 23-04-2016 RBRH_RS12115 f8d3d0573da75c5729fb24ced9403b1d 541 Gene3D G3DSA:3.40.50.450 123 299 6.0E-13 T 23-04-2016 RBRH_RS12115 f8d3d0573da75c5729fb24ced9403b1d 541 PANTHER PTHR32039:SF8 64 299 3.3E-90 T 23-04-2016 RBRH_RS12115 f8d3d0573da75c5729fb24ced9403b1d 541 PANTHER PTHR32039 64 299 3.3E-90 T 23-04-2016 RBRH_RS12115 f8d3d0573da75c5729fb24ced9403b1d 541 Pfam PF02481 DNA recombination-mediator protein A 89 290 5.0E-74 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RBRH_RS12115 f8d3d0573da75c5729fb24ced9403b1d 541 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 86 299 9.0E-74 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 SUPERFAMILY SSF63380 3 111 1.06E-23 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 Gene3D G3DSA:3.40.50.80 100 244 4.2E-38 T 23-04-2016 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 Pfam PF00175 Oxidoreductase NAD-binding domain 125 232 8.3E-16 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 PRINTS PR00406 Cytochrome B5 reductase signature 122 141 4.8E-9 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 PRINTS PR00406 Cytochrome B5 reductase signature 159 170 4.8E-9 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 PRINTS PR00406 Cytochrome B5 reductase signature 97 111 4.8E-9 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 PRINTS PR00406 Cytochrome B5 reductase signature 218 226 4.8E-9 T 23-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 SUPERFAMILY SSF52343 100 248 5.76E-36 T 23-04-2016 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 Pfam PF00970 Oxidoreductase FAD-binding domain 11 109 1.3E-11 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 218 226 1.8E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 159 170 1.8E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 147 156 1.8E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 122 141 1.8E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 6 360 6.9E-141 T 23-04-2016 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00930 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 Gene3D G3DSA:3.10.20.30 245 361 1.2E-30 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 PANTHER PTHR19370 6 270 4.4E-73 T 23-04-2016 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 277 350 2.5E-13 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 SUPERFAMILY SSF54292 241 358 4.98E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 PANTHER PTHR19370:SF93 6 270 4.4E-73 T 23-04-2016 RBRH_RS01165 e5655cced5ce9f1030810f29dc455a42 362 Gene3D G3DSA:2.40.30.10 5 99 1.4E-24 T 23-04-2016 RBRH_RS04475 dca6cfcf905c0ab7db6f39b597aca099 121 SUPERFAMILY SSF53137 3 119 2.4E-49 T 23-04-2016 RBRH_RS04475 dca6cfcf905c0ab7db6f39b597aca099 121 PANTHER PTHR12899 1 121 2.9E-35 T 23-04-2016 RBRH_RS04475 dca6cfcf905c0ab7db6f39b597aca099 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 121 7.5E-35 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04475 dca6cfcf905c0ab7db6f39b597aca099 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 121 3.3E-36 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04475 dca6cfcf905c0ab7db6f39b597aca099 121 Gene3D G3DSA:3.30.420.100 24 121 1.4E-34 T 23-04-2016 RBRH_RS04475 dca6cfcf905c0ab7db6f39b597aca099 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 121 25.744 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS10025 ebc681911421b43fe1167d48a6fa6227 709 Pfam PF00593 TonB dependent receptor 467 707 1.5E-34 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RBRH_RS10025 ebc681911421b43fe1167d48a6fa6227 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 159 6.5E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RBRH_RS10025 ebc681911421b43fe1167d48a6fa6227 709 PANTHER PTHR32552:SF10 55 709 8.1E-133 T 23-04-2016 RBRH_RS10025 ebc681911421b43fe1167d48a6fa6227 709 PANTHER PTHR32552:SF10 34 39 8.1E-133 T 23-04-2016 RBRH_RS10025 ebc681911421b43fe1167d48a6fa6227 709 Gene3D G3DSA:2.170.130.10 43 166 5.0E-36 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RBRH_RS10025 ebc681911421b43fe1167d48a6fa6227 709 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 706 4.0E-98 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RBRH_RS10025 ebc681911421b43fe1167d48a6fa6227 709 PANTHER PTHR32552 55 709 8.1E-133 T 23-04-2016 RBRH_RS10025 ebc681911421b43fe1167d48a6fa6227 709 PANTHER PTHR32552 34 39 8.1E-133 T 23-04-2016 RBRH_RS10025 ebc681911421b43fe1167d48a6fa6227 709 SUPERFAMILY SSF56935 32 708 1.1E-120 T 23-04-2016 RBRH_RS10025 ebc681911421b43fe1167d48a6fa6227 709 Gene3D G3DSA:2.40.170.20 175 707 3.0E-125 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RBRH_RS03265 2e09bb3e395e67ed051af67eebb54c40 336 Pfam PF01479 S4 domain 29 75 1.6E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS03265 2e09bb3e395e67ed051af67eebb54c40 336 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 144 158 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS03265 2e09bb3e395e67ed051af67eebb54c40 336 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 26 324 3.7E-73 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS03265 2e09bb3e395e67ed051af67eebb54c40 336 Gene3D G3DSA:3.10.290.10 29 77 2.9E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS03265 2e09bb3e395e67ed051af67eebb54c40 336 PANTHER PTHR11079:SF84 16 335 1.6E-117 T 23-04-2016 RBRH_RS03265 2e09bb3e395e67ed051af67eebb54c40 336 SMART SM00363 29 85 2.8E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS03265 2e09bb3e395e67ed051af67eebb54c40 336 SUPERFAMILY SSF55174 28 79 1.77E-8 T 23-04-2016 RBRH_RS03265 2e09bb3e395e67ed051af67eebb54c40 336 PANTHER PTHR11079 16 335 1.6E-117 T 23-04-2016 RBRH_RS03265 2e09bb3e395e67ed051af67eebb54c40 336 Pfam PF00849 RNA pseudouridylate synthase 106 257 1.8E-25 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS03265 2e09bb3e395e67ed051af67eebb54c40 336 SUPERFAMILY SSF55120 95 324 1.3E-61 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS04230 41f967b57845dd898f940ab7d4bc2e90 458 SUPERFAMILY SSF53098 7 456 1.82E-118 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS04230 41f967b57845dd898f940ab7d4bc2e90 458 PANTHER PTHR37319 4 455 2.6E-50 T 23-04-2016 RBRH_RS04230 41f967b57845dd898f940ab7d4bc2e90 458 Pfam PF14706 Transposase DNA-binding 8 64 1.8E-21 T 23-04-2016 IPR014735 Transposase, Tn5-like, N-terminal RBRH_RS04230 41f967b57845dd898f940ab7d4bc2e90 458 Pfam PF02281 Transposase Tn5 dimerisation domain 361 453 4.0E-11 T 23-04-2016 IPR003201 Transposase Tn5, dimerisation RBRH_RS04230 41f967b57845dd898f940ab7d4bc2e90 458 Gene3D G3DSA:3.90.350.10 67 346 6.5E-90 T 23-04-2016 IPR014736 Transposase, Tn5-like, core RBRH_RS04230 41f967b57845dd898f940ab7d4bc2e90 458 Gene3D G3DSA:1.10.246.40 5 64 8.5E-22 T 23-04-2016 IPR014735 Transposase, Tn5-like, N-terminal RBRH_RS04230 41f967b57845dd898f940ab7d4bc2e90 458 PANTHER PTHR37319:SF1 4 455 2.6E-50 T 23-04-2016 RBRH_RS04230 41f967b57845dd898f940ab7d4bc2e90 458 Gene3D G3DSA:1.10.740.10 350 456 2.9E-30 T 23-04-2016 IPR014737 Transposase, Tn5-like, C-terminal RBRH_RS01400 92509c385e6e0ad756525fe631b3be72 339 PANTHER PTHR12001 24 339 1.1E-110 T 23-04-2016 IPR017446 Polyprenyl synthetase-related RBRH_RS01400 92509c385e6e0ad756525fe631b3be72 339 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 98 112 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RBRH_RS01400 92509c385e6e0ad756525fe631b3be72 339 Gene3D G3DSA:1.10.600.10 25 338 2.2E-99 T 23-04-2016 IPR008949 Isoprenoid synthase domain RBRH_RS01400 92509c385e6e0ad756525fe631b3be72 339 Pfam PF00348 Polyprenyl synthetase 49 278 4.1E-75 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RBRH_RS01400 92509c385e6e0ad756525fe631b3be72 339 PANTHER PTHR12001:SF47 24 339 1.1E-110 T 23-04-2016 RBRH_RS01400 92509c385e6e0ad756525fe631b3be72 339 SUPERFAMILY SSF48576 19 338 3.52E-98 T 23-04-2016 IPR008949 Isoprenoid synthase domain RBRH_RS04035 c320faa7660ed0f66b6cdc5eadf30711 141 PANTHER PTHR37406 5 139 1.7E-18 T 23-04-2016 RBRH_RS04035 c320faa7660ed0f66b6cdc5eadf30711 141 Pfam PF00959 Phage lysozyme 33 130 6.6E-6 T 23-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 RBRH_RS04035 c320faa7660ed0f66b6cdc5eadf30711 141 Gene3D G3DSA:1.10.530.40 10 139 9.9E-32 T 23-04-2016 IPR023347 Lysozyme domain GO:0003796 RBRH_RS04035 c320faa7660ed0f66b6cdc5eadf30711 141 SUPERFAMILY SSF53955 10 139 1.89E-33 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS09855 5c52738bebfd01c7cfde2c9f44bb0537 366 PANTHER PTHR22926:SF7 6 359 1.7E-91 T 23-04-2016 RBRH_RS09855 5c52738bebfd01c7cfde2c9f44bb0537 366 Pfam PF00953 Glycosyl transferase family 4 77 233 2.2E-29 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS09855 5c52738bebfd01c7cfde2c9f44bb0537 366 PANTHER PTHR22926 6 359 1.7E-91 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS02355 646ac324d5c099b11a7859f508f9db47 395 Pfam PF00202 Aminotransferase class-III 19 391 3.1E-99 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS02355 646ac324d5c099b11a7859f508f9db47 395 SUPERFAMILY SSF53383 6 393 9.41E-114 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS02355 646ac324d5c099b11a7859f508f9db47 395 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 8 392 40.852 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RBRH_RS02355 646ac324d5c099b11a7859f508f9db47 395 Gene3D G3DSA:3.40.640.10 55 293 2.2E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS02355 646ac324d5c099b11a7859f508f9db47 395 PIRSF PIRSF000521 19 394 2.3E-41 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS02355 646ac324d5c099b11a7859f508f9db47 395 PANTHER PTHR11986 1 394 3.1E-175 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS02355 646ac324d5c099b11a7859f508f9db47 395 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 216 253 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS02355 646ac324d5c099b11a7859f508f9db47 395 Gene3D G3DSA:3.90.1150.10 16 54 1.0E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS02355 646ac324d5c099b11a7859f508f9db47 395 Gene3D G3DSA:3.90.1150.10 299 393 1.0E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS02355 646ac324d5c099b11a7859f508f9db47 395 PANTHER PTHR11986:SF88 1 394 3.1E-175 T 23-04-2016 RBRH_RS07755 3755a28914d7428983727903519ccca7 501 PANTHER PTHR12526:SF387 173 321 9.8E-96 T 23-04-2016 RBRH_RS07755 3755a28914d7428983727903519ccca7 501 PANTHER PTHR12526:SF387 384 501 9.8E-96 T 23-04-2016 RBRH_RS07755 3755a28914d7428983727903519ccca7 501 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 20 501 6.2E-187 T 23-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 RBRH_RS07755 3755a28914d7428983727903519ccca7 501 Gene3D G3DSA:2.60.120.10 390 501 7.2E-48 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RBRH_RS07755 3755a28914d7428983727903519ccca7 501 Gene3D G3DSA:3.90.550.10 20 303 4.3E-94 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS07755 3755a28914d7428983727903519ccca7 501 PANTHER PTHR12526 384 501 9.8E-96 T 23-04-2016 RBRH_RS07755 3755a28914d7428983727903519ccca7 501 Pfam PF00483 Nucleotidyl transferase 22 318 3.7E-55 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RBRH_RS07755 3755a28914d7428983727903519ccca7 501 SUPERFAMILY SSF53448 20 312 1.82E-60 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS07755 3755a28914d7428983727903519ccca7 501 PANTHER PTHR12526 173 321 9.8E-96 T 23-04-2016 RBRH_RS07755 3755a28914d7428983727903519ccca7 501 SUPERFAMILY SSF51182 209 501 2.41E-79 T 23-04-2016 IPR011051 RmlC-like cupin domain RBRH_RS07755 3755a28914d7428983727903519ccca7 501 Pfam PF01050 Mannose-6-phosphate isomerase 347 497 1.9E-71 T 23-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 314 1.5E-28 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 SMART SM01400 6 123 1.4E-79 T 23-04-2016 RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 315 49.014 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 PANTHER PTHR10210:SF41 1 314 5.2E-179 T 23-04-2016 RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 Gene3D G3DSA:3.40.50.2020 3 161 5.0E-76 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 Gene3D G3DSA:3.40.50.2020 162 288 2.1E-54 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 SUPERFAMILY SSF53271 71 304 3.84E-64 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 PANTHER PTHR10210 1 314 5.2E-179 T 23-04-2016 RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 9.8E-50 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 314 1.5E-122 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RBRH_RS11075 b7386219bea1b1c7df1cd4b542efb1ab 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 RBRH_RS10085 66146156e3ef2e43db9d86209f54a836 610 SUPERFAMILY SSF48208 220 606 6.12E-91 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RBRH_RS10085 66146156e3ef2e43db9d86209f54a836 610 Pfam PF00723 Glycosyl hydrolases family 15 236 544 3.3E-25 T 23-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 RBRH_RS10085 66146156e3ef2e43db9d86209f54a836 610 Gene3D G3DSA:1.50.10.10 233 606 1.1E-78 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RBRH_RS10085 66146156e3ef2e43db9d86209f54a836 610 PANTHER PTHR31616:SF2 22 610 4.7E-159 T 23-04-2016 RBRH_RS10085 66146156e3ef2e43db9d86209f54a836 610 PANTHER PTHR31616 22 610 4.7E-159 T 23-04-2016 RBRH_RS05310 86cf830b0b9cbbbbb7ef74a2fc102a29 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05310 86cf830b0b9cbbbbb7ef74a2fc102a29 65 PANTHER PTHR33343 1 63 9.7E-20 T 23-04-2016 RBRH_RS05310 86cf830b0b9cbbbbb7ef74a2fc102a29 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.29E-16 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RBRH_RS05310 86cf830b0b9cbbbbb7ef74a2fc102a29 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.29E-16 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RBRH_RS05310 86cf830b0b9cbbbbb7ef74a2fc102a29 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.29E-16 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RBRH_RS05310 86cf830b0b9cbbbbb7ef74a2fc102a29 65 Pfam PF01632 Ribosomal protein L35 2 62 7.4E-23 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05310 86cf830b0b9cbbbbb7ef74a2fc102a29 65 SUPERFAMILY SSF143034 2 64 6.54E-22 T 23-04-2016 RBRH_RS05310 86cf830b0b9cbbbbb7ef74a2fc102a29 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.688 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RBRH_RS05310 86cf830b0b9cbbbbb7ef74a2fc102a29 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 1.6E-24 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RBRH_RS11820 9b7620221a726eed9d32b0e9be1ca6a2 276 PANTHER PTHR21091 133 262 5.5E-45 T 23-04-2016 RBRH_RS11820 9b7620221a726eed9d32b0e9be1ca6a2 276 Gene3D G3DSA:3.20.20.220 5 275 3.3E-106 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like RBRH_RS11820 9b7620221a726eed9d32b0e9be1ca6a2 276 PANTHER PTHR21091:SF31 133 262 5.5E-45 T 23-04-2016 RBRH_RS11820 9b7620221a726eed9d32b0e9be1ca6a2 276 SUPERFAMILY SSF51730 5 275 9.61E-98 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like RBRH_RS11820 9b7620221a726eed9d32b0e9be1ca6a2 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 274 1.3E-97 T 23-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RBRH_RS11820 9b7620221a726eed9d32b0e9be1ca6a2 276 Pfam PF02219 Methylenetetrahydrofolate reductase 5 274 1.3E-89 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RBRH_RS15150 c228bbd90bc2ca85461392c2368148d6 289 SUPERFAMILY SSF53955 2 148 2.06E-38 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS15150 c228bbd90bc2ca85461392c2368148d6 289 Gene3D G3DSA:3.10.350.10 216 263 7.6E-6 T 23-04-2016 IPR018392 LysM domain RBRH_RS15150 c228bbd90bc2ca85461392c2368148d6 289 Gene3D G3DSA:1.10.530.10 2 146 8.6E-43 T 23-04-2016 RBRH_RS15150 c228bbd90bc2ca85461392c2368148d6 289 PANTHER PTHR21666 2 262 2.2E-86 T 23-04-2016 RBRH_RS15150 c228bbd90bc2ca85461392c2368148d6 289 PANTHER PTHR21666:SF206 2 262 2.2E-86 T 23-04-2016 RBRH_RS15150 c228bbd90bc2ca85461392c2368148d6 289 Pfam PF01464 Transglycosylase SLT domain 2 96 1.2E-23 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RBRH_RS15150 c228bbd90bc2ca85461392c2368148d6 289 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 9 37 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RBRH_RS07925 1ea048f3535fad67b78460b408daaa84 216 Gene3D G3DSA:3.30.1330.60 81 201 5.2E-30 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS07925 1ea048f3535fad67b78460b408daaa84 216 PANTHER PTHR30128 57 208 4.0E-28 T 23-04-2016 RBRH_RS07925 1ea048f3535fad67b78460b408daaa84 216 Pfam PF00691 OmpA family 92 196 6.2E-19 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS07925 1ea048f3535fad67b78460b408daaa84 216 SUPERFAMILY SSF103088 68 200 4.71E-27 T 23-04-2016 IPR006665 OmpA-like domain RBRH_RS03765 e6db69c5dda509b637b7d7836800426d 754 PANTHER PTHR24220 510 749 4.2E-87 T 23-04-2016 RBRH_RS03765 e6db69c5dda509b637b7d7836800426d 754 Gene3D G3DSA:3.40.50.300 509 747 5.3E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03765 e6db69c5dda509b637b7d7836800426d 754 SMART SM00382 533 727 9.8E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS03765 e6db69c5dda509b637b7d7836800426d 754 Pfam PF00005 ABC transporter 524 680 1.4E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS03765 e6db69c5dda509b637b7d7836800426d 754 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 728 749 5.8E-11 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RBRH_RS03765 e6db69c5dda509b637b7d7836800426d 754 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 314 9.9E-29 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RBRH_RS03765 e6db69c5dda509b637b7d7836800426d 754 PANTHER PTHR24220:SF358 510 749 4.2E-87 T 23-04-2016 RBRH_RS03765 e6db69c5dda509b637b7d7836800426d 754 SUPERFAMILY SSF52540 509 749 1.74E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07020 804ab0fd1c562df2abd1fde918e55f47 200 SUPERFAMILY SSF51735 130 200 5.86E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07020 804ab0fd1c562df2abd1fde918e55f47 200 PANTHER PTHR11695:SF557 29 200 3.1E-62 T 23-04-2016 RBRH_RS07020 804ab0fd1c562df2abd1fde918e55f47 200 Pfam PF16884 N-terminal domain of oxidoreductase 12 119 1.3E-37 T 23-04-2016 RBRH_RS07020 804ab0fd1c562df2abd1fde918e55f47 200 PANTHER PTHR11695 29 200 3.1E-62 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RBRH_RS07020 804ab0fd1c562df2abd1fde918e55f47 200 Gene3D G3DSA:3.90.180.10 9 146 9.0E-51 T 23-04-2016 IPR011032 GroES-like RBRH_RS07020 804ab0fd1c562df2abd1fde918e55f47 200 Gene3D G3DSA:3.40.50.720 147 200 2.6E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07020 804ab0fd1c562df2abd1fde918e55f47 200 SUPERFAMILY SSF50129 10 144 1.63E-39 T 23-04-2016 IPR011032 GroES-like RBRH_RS05200 4b15200bd1c97983295fa860820e7555 735 PANTHER PTHR30509 341 680 3.3E-223 T 23-04-2016 RBRH_RS05200 4b15200bd1c97983295fa860820e7555 735 PANTHER PTHR30509 1 268 3.3E-223 T 23-04-2016 RBRH_RS05200 4b15200bd1c97983295fa860820e7555 735 PANTHER PTHR30509:SF6 341 680 3.3E-223 T 23-04-2016 RBRH_RS05200 4b15200bd1c97983295fa860820e7555 735 PANTHER PTHR30509:SF6 1 268 3.3E-223 T 23-04-2016 RBRH_RS05200 4b15200bd1c97983295fa860820e7555 735 Pfam PF04632 Fusaric acid resistance protein family 32 715 2.5E-210 T 23-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 PANTHER PTHR18919:SF95 1 393 5.7E-231 T 23-04-2016 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 Gene3D G3DSA:3.40.47.10 277 392 6.9E-73 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 Gene3D G3DSA:3.40.47.10 142 193 6.9E-73 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 2.5E-107 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 SUPERFAMILY SSF53901 3 270 1.53E-90 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 PANTHER PTHR18919 1 393 5.7E-231 T 23-04-2016 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 PIRSF PIRSF000429 1 393 1.9E-133 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 Pfam PF02803 Thiolase, C-terminal domain 270 392 1.8E-54 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 SUPERFAMILY SSF53901 271 392 2.52E-47 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 3.4E-151 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 Gene3D G3DSA:3.40.47.10 3 123 4.4E-79 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 Gene3D G3DSA:3.40.47.10 194 276 4.4E-79 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS05905 847363deca3070777434e6958a082c9a 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RBRH_RS09110 7c5f990e8965f77f68fc4f403233cb0a 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS09110 7c5f990e8965f77f68fc4f403233cb0a 89 Gene3D G3DSA:1.10.287.10 5 89 6.0E-39 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RBRH_RS09110 7c5f990e8965f77f68fc4f403233cb0a 89 Pfam PF00312 Ribosomal protein S15 8 88 2.3E-37 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS09110 7c5f990e8965f77f68fc4f403233cb0a 89 SMART SM01387 8 88 2.0E-51 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS09110 7c5f990e8965f77f68fc4f403233cb0a 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.49 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RBRH_RS09110 7c5f990e8965f77f68fc4f403233cb0a 89 SUPERFAMILY SSF47060 5 89 1.53E-34 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RBRH_RS09110 7c5f990e8965f77f68fc4f403233cb0a 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.1E-39 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RBRH_RS09110 7c5f990e8965f77f68fc4f403233cb0a 89 PANTHER PTHR23321 6 88 3.1E-41 T 23-04-2016 RBRH_RS09110 7c5f990e8965f77f68fc4f403233cb0a 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 7.0E-28 T 23-04-2016 RBRH_RS03400 fd9be1e684b52f51b4f25ca7b2c97ad2 334 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 231 248 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 RBRH_RS03400 fd9be1e684b52f51b4f25ca7b2c97ad2 334 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 334 47.968 T 23-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 RBRH_RS03400 fd9be1e684b52f51b4f25ca7b2c97ad2 334 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 4 289 5.9E-73 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RBRH_RS03400 fd9be1e684b52f51b4f25ca7b2c97ad2 334 PANTHER PTHR30480 1 308 5.1E-101 T 23-04-2016 RBRH_RS03400 fd9be1e684b52f51b4f25ca7b2c97ad2 334 Gene3D G3DSA:3.20.20.300 1 303 6.0E-88 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RBRH_RS03400 fd9be1e684b52f51b4f25ca7b2c97ad2 334 PANTHER PTHR30480:SF7 1 308 5.1E-101 T 23-04-2016 RBRH_RS03400 fd9be1e684b52f51b4f25ca7b2c97ad2 334 SUPERFAMILY SSF51445 1 298 2.21E-79 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily RBRH_RS10260 f792a710518d619c23c763c204b52574 192 Pfam PF00114 Pilin (bacterial filament) 55 191 8.9E-12 T 23-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 RBRH_RS10260 f792a710518d619c23c763c204b52574 192 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 25 47 5.6E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS10260 f792a710518d619c23c763c204b52574 192 Gene3D G3DSA:3.30.700.10 27 191 7.7E-28 T 23-04-2016 RBRH_RS10260 f792a710518d619c23c763c204b52574 192 Pfam PF13633 Prokaryotic N-terminal methylation site 25 50 2.3E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS10260 f792a710518d619c23c763c204b52574 192 SUPERFAMILY SSF54523 27 165 5.76E-18 T 23-04-2016 RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 Pfam PF03466 LysR substrate binding domain 87 292 5.3E-38 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 Gene3D G3DSA:1.10.10.10 1 83 5.1E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 PANTHER PTHR30346 1 292 1.3E-79 T 23-04-2016 RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 Gene3D G3DSA:3.40.190.10 175 263 1.7E-28 T 23-04-2016 RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-22 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 SUPERFAMILY SSF46785 1 82 2.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 Gene3D G3DSA:3.40.190.10 89 174 8.2E-27 T 23-04-2016 RBRH_RS08705 dcb34237d98da88f8a55127f7a5e3828 298 SUPERFAMILY SSF53850 87 292 3.8E-31 T 23-04-2016 RBRH_RS12030 db72fcfb50652e38e699d77a9db159d0 148 Gene3D G3DSA:3.30.479.10 3 146 2.2E-36 T 23-04-2016 RBRH_RS12030 db72fcfb50652e38e699d77a9db159d0 148 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 147 4.7E-34 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RBRH_RS12030 db72fcfb50652e38e699d77a9db159d0 148 PANTHER PTHR12589 4 143 9.2E-28 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RBRH_RS12030 db72fcfb50652e38e699d77a9db159d0 148 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 117 5.3E-27 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RBRH_RS12030 db72fcfb50652e38e699d77a9db159d0 148 SUPERFAMILY SSF55620 2 147 1.83E-37 T 23-04-2016 RBRH_RS16285 365b6d5458a8f340a3773eb181b5209a 533 SMART SM00382 188 383 0.0033 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS16285 365b6d5458a8f340a3773eb181b5209a 533 SMART SM00843 466 531 1.3E-37 T 23-04-2016 IPR018541 FtsK gamma domain RBRH_RS16285 365b6d5458a8f340a3773eb181b5209a 533 SUPERFAMILY SSF52540 141 434 2.39E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS16285 365b6d5458a8f340a3773eb181b5209a 533 SUPERFAMILY SSF46785 467 530 1.02E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS16285 365b6d5458a8f340a3773eb181b5209a 533 Pfam PF09397 Ftsk gamma domain 468 528 7.9E-26 T 23-04-2016 IPR018541 FtsK gamma domain RBRH_RS16285 365b6d5458a8f340a3773eb181b5209a 533 Gene3D G3DSA:3.40.50.300 126 429 7.4E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS16285 365b6d5458a8f340a3773eb181b5209a 533 Pfam PF01580 FtsK/SpoIIIE family 153 362 7.3E-68 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RBRH_RS16285 365b6d5458a8f340a3773eb181b5209a 533 PANTHER PTHR22683:SF41 44 529 1.4E-248 T 23-04-2016 RBRH_RS16285 365b6d5458a8f340a3773eb181b5209a 533 PANTHER PTHR22683 44 529 1.4E-248 T 23-04-2016 RBRH_RS05770 1ec7c3c73fc7e90543a1abe6c5a218b1 507 PANTHER PTHR11061:SF30 36 506 1.8E-97 T 23-04-2016 RBRH_RS05770 1ec7c3c73fc7e90543a1abe6c5a218b1 507 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 489 499 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site RBRH_RS05770 1ec7c3c73fc7e90543a1abe6c5a218b1 507 SUPERFAMILY SSF53335 128 506 2.72E-74 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS05770 1ec7c3c73fc7e90543a1abe6c5a218b1 507 Gene3D G3DSA:3.40.50.150 315 506 7.9E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS05770 1ec7c3c73fc7e90543a1abe6c5a218b1 507 SUPERFAMILY SSF50249 66 126 1.26E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05770 1ec7c3c73fc7e90543a1abe6c5a218b1 507 PANTHER PTHR11061 36 506 1.8E-97 T 23-04-2016 RBRH_RS05770 1ec7c3c73fc7e90543a1abe6c5a218b1 507 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 73 499 1.9E-84 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 RBRH_RS05770 1ec7c3c73fc7e90543a1abe6c5a218b1 507 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 65 507 68.968 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 RBRH_RS05770 1ec7c3c73fc7e90543a1abe6c5a218b1 507 Gene3D G3DSA:2.40.50.140 66 140 3.5E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05770 1ec7c3c73fc7e90543a1abe6c5a218b1 507 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 324 505 8.1E-17 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 Gene3D G3DSA:3.30.70.120 1 112 3.8E-51 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 PANTHER PTHR30115:SF12 1 112 8.8E-71 T 23-04-2016 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 SMART SM00938 4 105 1.3E-67 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 PANTHER PTHR30115 1 112 8.8E-71 T 23-04-2016 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 SUPERFAMILY SSF54913 1 112 7.31E-46 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 PRINTS PR00340 P-II protein signature 52 75 7.6E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 PRINTS PR00340 P-II protein signature 23 41 7.6E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 PRINTS PR00340 P-II protein signature 83 103 7.6E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 PRINTS PR00340 P-II protein signature 2 17 7.6E-44 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 PIRSF PIRSF039144 1 112 1.1E-54 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS11315 bf53fbcbeb7b102012f61f27ad41f65e 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.1E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RBRH_RS05210 63c9e9f81baec1f210dd06b2fdcbb55d 313 Gene3D G3DSA:3.40.190.10 179 264 1.0E-16 T 23-04-2016 RBRH_RS05210 63c9e9f81baec1f210dd06b2fdcbb55d 313 SUPERFAMILY SSF53850 90 299 1.68E-41 T 23-04-2016 RBRH_RS05210 63c9e9f81baec1f210dd06b2fdcbb55d 313 Pfam PF03466 LysR substrate binding domain 88 295 2.9E-39 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS05210 63c9e9f81baec1f210dd06b2fdcbb55d 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.7E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS05210 63c9e9f81baec1f210dd06b2fdcbb55d 313 PANTHER PTHR30126 1 310 3.2E-130 T 23-04-2016 RBRH_RS05210 63c9e9f81baec1f210dd06b2fdcbb55d 313 Gene3D G3DSA:1.10.10.10 3 86 5.6E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS05210 63c9e9f81baec1f210dd06b2fdcbb55d 313 SUPERFAMILY SSF46785 3 111 5.19E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS05210 63c9e9f81baec1f210dd06b2fdcbb55d 313 PANTHER PTHR30126:SF26 1 310 3.2E-130 T 23-04-2016 RBRH_RS05210 63c9e9f81baec1f210dd06b2fdcbb55d 313 Gene3D G3DSA:3.40.190.10 92 178 2.3E-22 T 23-04-2016 RBRH_RS04480 647d6b63c71213d1f66cafa09a53b3f1 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site RBRH_RS04480 647d6b63c71213d1f66cafa09a53b3f1 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 5.0E-64 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RBRH_RS04480 647d6b63c71213d1f66cafa09a53b3f1 172 Gene3D G3DSA:3.30.230.10 81 165 3.5E-32 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS04480 647d6b63c71213d1f66cafa09a53b3f1 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 81 1.2E-26 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS04480 647d6b63c71213d1f66cafa09a53b3f1 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 163 7.5E-29 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RBRH_RS04480 647d6b63c71213d1f66cafa09a53b3f1 172 SUPERFAMILY SSF54768 13 82 1.15E-22 T 23-04-2016 RBRH_RS04480 647d6b63c71213d1f66cafa09a53b3f1 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 34.135 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RBRH_RS04480 647d6b63c71213d1f66cafa09a53b3f1 172 PANTHER PTHR13718 15 170 1.5E-65 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04480 647d6b63c71213d1f66cafa09a53b3f1 172 SUPERFAMILY SSF54211 85 165 2.53E-25 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS04480 647d6b63c71213d1f66cafa09a53b3f1 172 Gene3D G3DSA:3.30.160.20 15 79 5.0E-27 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 SUPERFAMILY SSF46689 446 517 2.87E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 Pfam PF00158 Sigma-54 interaction domain 139 304 2.3E-68 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 Gene3D G3DSA:3.40.50.300 135 310 1.0E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 PANTHER PTHR32071 432 518 7.8E-209 T 23-04-2016 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 PANTHER PTHR32071 1 389 7.8E-209 T 23-04-2016 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 PANTHER PTHR32071:SF15 432 518 7.8E-209 T 23-04-2016 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 PANTHER PTHR32071:SF15 1 389 7.8E-209 T 23-04-2016 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 Pfam PF02954 Bacterial regulatory protein, Fis family 476 513 2.0E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 SUPERFAMILY SSF52540 138 381 5.09E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 SMART SM00448 2 114 2.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 397 4.4E-188 T 23-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 498 518 1.0E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 481 498 1.0E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 Gene3D G3DSA:1.10.10.60 463 518 2.7E-37 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 Gene3D G3DSA:1.10.10.60 349 383 2.7E-37 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 SUPERFAMILY SSF52172 2 183 1.29E-37 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 Gene3D G3DSA:3.40.50.2300 3 120 4.4E-31 T 23-04-2016 RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 SMART SM00382 158 301 3.6E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS08400 743cc695de323c25e45336ca159eaa54 519 Pfam PF00072 Response regulator receiver domain 4 114 6.2E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS03285 e4ed3fc1475d082caf26c657e0a6957f 236 SUPERFAMILY SSF53790 3 234 1.96E-65 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RBRH_RS03285 e4ed3fc1475d082caf26c657e0a6957f 236 PANTHER PTHR21091 55 178 1.6E-24 T 23-04-2016 RBRH_RS03285 e4ed3fc1475d082caf26c657e0a6957f 236 PANTHER PTHR21091:SF118 55 178 1.6E-24 T 23-04-2016 RBRH_RS03285 e4ed3fc1475d082caf26c657e0a6957f 236 PIRSF PIRSF005917 1 235 7.6E-51 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS03285 e4ed3fc1475d082caf26c657e0a6957f 236 Gene3D G3DSA:3.30.950.10 121 235 9.4E-29 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RBRH_RS03285 e4ed3fc1475d082caf26c657e0a6957f 236 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 63 214 4.2E-8 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RBRH_RS01545 162e8b05b65aa941e245096baa862dd4 702 PANTHER PTHR23355:SF5 243 633 1.7E-38 T 23-04-2016 RBRH_RS01545 162e8b05b65aa941e245096baa862dd4 702 Pfam PF00773 RNB domain 244 473 3.5E-31 T 23-04-2016 RBRH_RS01545 162e8b05b65aa941e245096baa862dd4 702 Pfam PF00773 RNB domain 474 515 1.2E-9 T 23-04-2016 RBRH_RS01545 162e8b05b65aa941e245096baa862dd4 702 PANTHER PTHR23355 243 633 1.7E-38 T 23-04-2016 RBRH_RS01545 162e8b05b65aa941e245096baa862dd4 702 SMART SM00955 233 518 8.3E-59 T 23-04-2016 RBRH_RS01545 162e8b05b65aa941e245096baa862dd4 702 SUPERFAMILY SSF50249 201 567 1.71E-72 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS08935 a04161e8eb39590b59645d44e7463d11 230 SUPERFAMILY SSF47616 77 203 3.27E-42 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RBRH_RS08935 a04161e8eb39590b59645d44e7463d11 230 Gene3D G3DSA:3.40.30.10 3 89 5.6E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS08935 a04161e8eb39590b59645d44e7463d11 230 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 80 7.7E-13 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RBRH_RS08935 a04161e8eb39590b59645d44e7463d11 230 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 196 6.1E-14 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal RBRH_RS08935 a04161e8eb39590b59645d44e7463d11 230 SUPERFAMILY SSF52833 2 84 7.2E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS08935 a04161e8eb39590b59645d44e7463d11 230 PANTHER PTHR11260 2 204 2.0E-77 T 23-04-2016 RBRH_RS08935 a04161e8eb39590b59645d44e7463d11 230 PANTHER PTHR11260:SF178 2 204 2.0E-77 T 23-04-2016 RBRH_RS08935 a04161e8eb39590b59645d44e7463d11 230 Gene3D G3DSA:1.20.1050.10 90 200 3.5E-56 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 Gene3D G3DSA:1.10.300.10 117 210 2.2E-35 T 23-04-2016 RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 Gene3D G3DSA:3.40.440.10 211 280 2.0E-68 T 23-04-2016 RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 Gene3D G3DSA:3.40.440.10 18 108 2.0E-68 T 23-04-2016 RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 SUPERFAMILY SSF52540 18 451 1.7E-169 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 454 206.922 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 20 451 2.0E-170 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 SMART SM00788 18 446 5.9E-285 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 147 158 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 Pfam PF00709 Adenylosuccinate synthetase 19 445 4.3E-170 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 25 32 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 Gene3D G3DSA:3.90.170.10 281 447 3.6E-62 T 23-04-2016 RBRH_RS05850 420e7ffc817e7179bdf21bc93a78840d 454 PANTHER PTHR11846 16 450 3.2E-225 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 Gene3D G3DSA:3.90.180.10 2 172 9.3E-66 T 23-04-2016 IPR011032 GroES-like RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 SMART SM00829 14 338 3.0E-4 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 135 1.2E-31 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 PANTHER PTHR11695:SF280 17 341 6.3E-132 T 23-04-2016 RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 PANTHER PTHR11695 17 341 6.3E-132 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 SUPERFAMILY SSF50129 310 338 6.04E-53 T 23-04-2016 IPR011032 GroES-like RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 SUPERFAMILY SSF50129 3 146 6.04E-53 T 23-04-2016 IPR011032 GroES-like RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 Pfam PF00107 Zinc-binding dehydrogenase 179 304 6.4E-28 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 Gene3D G3DSA:3.40.50.720 173 288 2.2E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01010 1138861a616f41c3b749d90ca8b8f81c 341 SUPERFAMILY SSF51735 144 307 3.83E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 SUPERFAMILY SSF109604 15 198 2.29E-42 T 23-04-2016 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 Pfam PF13328 HD domain 19 185 8.8E-46 T 23-04-2016 IPR003607 HD/PDEase domain RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 Gene3D G3DSA:3.30.70.260 666 737 5.8E-15 T 23-04-2016 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 PANTHER PTHR21262:SF5 36 106 1.9E-260 T 23-04-2016 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 PANTHER PTHR21262:SF5 123 741 1.9E-260 T 23-04-2016 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 SUPERFAMILY SSF81271 400 465 1.66E-19 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 Gene3D G3DSA:3.30.460.10 187 333 1.5E-50 T 23-04-2016 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 Pfam PF13291 ACT domain 663 739 2.6E-17 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 SMART SM00954 244 354 4.2E-67 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 PANTHER PTHR21262 36 106 1.9E-260 T 23-04-2016 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 PANTHER PTHR21262 123 741 1.9E-260 T 23-04-2016 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 25 738 1.1E-170 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 Gene3D G3DSA:3.10.20.30 407 467 2.4E-21 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 Pfam PF02824 TGS domain 407 465 1.6E-20 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 Pfam PF04607 Region found in RelA / SpoT proteins 244 353 3.0E-38 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 SUPERFAMILY SSF81301 201 381 5.23E-62 T 23-04-2016 RBRH_RS05280 d934ffa7910e002472c93e1c7d318055 741 SUPERFAMILY SSF55021 664 739 3.1E-15 T 23-04-2016 RBRH_RS06560 9d88ee3e330781371371ddafa9ce13b8 149 Pfam PF01668 SmpB protein 3 65 4.7E-28 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 RBRH_RS06560 9d88ee3e330781371371ddafa9ce13b8 149 Gene3D G3DSA:2.40.280.10 3 122 3.1E-48 T 23-04-2016 IPR023620 Small protein B RBRH_RS06560 9d88ee3e330781371371ddafa9ce13b8 149 Hamap MF_00023 SsrA-binding protein [smpB]. 1 149 73.44 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 RBRH_RS06560 9d88ee3e330781371371ddafa9ce13b8 149 SUPERFAMILY SSF74982 3 127 1.7E-50 T 23-04-2016 IPR023620 Small protein B RBRH_RS06560 9d88ee3e330781371371ddafa9ce13b8 149 PANTHER PTHR30308 3 149 4.7E-73 T 23-04-2016 RBRH_RS06560 9d88ee3e330781371371ddafa9ce13b8 149 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 4.0E-59 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 RBRH_RS06560 9d88ee3e330781371371ddafa9ce13b8 149 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 145 1.6E-53 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 RBRH_RS06560 9d88ee3e330781371371ddafa9ce13b8 149 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site RBRH_RS06560 9d88ee3e330781371371ddafa9ce13b8 149 PANTHER PTHR30308:SF2 3 149 4.7E-73 T 23-04-2016 RBRH_RS08255 17d5f0cdaeaa91a402e3f86941392158 297 Gene3D G3DSA:1.20.58.410 4 48 3.2E-6 T 23-04-2016 RBRH_RS08255 17d5f0cdaeaa91a402e3f86941392158 297 SUPERFAMILY SSF75620 5 294 9.55E-122 T 23-04-2016 RBRH_RS08255 17d5f0cdaeaa91a402e3f86941392158 297 PANTHER PTHR11075 2 295 6.6E-145 T 23-04-2016 RBRH_RS08255 17d5f0cdaeaa91a402e3f86941392158 297 Pfam PF03462 PCRF domain 7 152 4.5E-46 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RBRH_RS08255 17d5f0cdaeaa91a402e3f86941392158 297 SMART SM00937 17 127 7.1E-56 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RBRH_RS08255 17d5f0cdaeaa91a402e3f86941392158 297 Gene3D G3DSA:3.30.160.20 160 238 8.4E-38 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RBRH_RS08255 17d5f0cdaeaa91a402e3f86941392158 297 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 177 193 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RBRH_RS08255 17d5f0cdaeaa91a402e3f86941392158 297 Pfam PF00472 RF-1 domain 161 269 1.7E-40 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RBRH_RS08255 17d5f0cdaeaa91a402e3f86941392158 297 PANTHER PTHR11075:SF6 2 295 6.6E-145 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RBRH_RS08255 17d5f0cdaeaa91a402e3f86941392158 297 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 295 3.3E-141 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RBRH_RS04120 8a1b4854af0cff83f3125bf92ef62c20 249 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 50 222 5.9E-43 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RBRH_RS04120 8a1b4854af0cff83f3125bf92ef62c20 249 Pfam PF03641 Possible lysine decarboxylase 92 221 1.5E-32 T 23-04-2016 IPR031100 LOG family RBRH_RS04120 8a1b4854af0cff83f3125bf92ef62c20 249 PANTHER PTHR31223:SF1 4 228 3.6E-91 T 23-04-2016 RBRH_RS04120 8a1b4854af0cff83f3125bf92ef62c20 249 SUPERFAMILY SSF102405 25 221 8.09E-59 T 23-04-2016 RBRH_RS04120 8a1b4854af0cff83f3125bf92ef62c20 249 PANTHER PTHR31223 4 228 3.6E-91 T 23-04-2016 RBRH_RS04120 8a1b4854af0cff83f3125bf92ef62c20 249 Gene3D G3DSA:3.40.50.450 28 246 1.4E-64 T 23-04-2016 RBRH_RS03450 189bf9f5c85c778558847cd71e0424b5 139 Pfam PF12802 MarR family 40 101 3.9E-11 T 23-04-2016 RBRH_RS03450 189bf9f5c85c778558847cd71e0424b5 139 SUPERFAMILY SSF46785 11 134 1.47E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS03450 189bf9f5c85c778558847cd71e0424b5 139 Gene3D G3DSA:1.10.10.10 11 129 6.7E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS03450 189bf9f5c85c778558847cd71e0424b5 139 SMART SM00347 34 137 4.8E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS07600 20a7355583fb5cc83a6ec789bcad3c51 298 PANTHER PTHR30406 7 279 2.7E-153 T 23-04-2016 RBRH_RS07600 20a7355583fb5cc83a6ec789bcad3c51 298 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 12 274 2.3E-125 T 23-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RBRH_RS07600 20a7355583fb5cc83a6ec789bcad3c51 298 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 270 5.3E-96 T 23-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RBRH_RS07600 20a7355583fb5cc83a6ec789bcad3c51 298 Gene3D G3DSA:1.10.3720.10 21 275 6.5E-50 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS07600 20a7355583fb5cc83a6ec789bcad3c51 298 PANTHER PTHR30406:SF6 7 279 2.7E-153 T 23-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RBRH_RS07600 20a7355583fb5cc83a6ec789bcad3c51 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 276 1.2E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS07600 20a7355583fb5cc83a6ec789bcad3c51 298 SUPERFAMILY SSF161098 18 267 4.3E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS09065 7a5e9f41aadfad7495c0d47a4ed703b7 417 PANTHER PTHR11993 3 164 8.5E-242 T 23-04-2016 RBRH_RS09065 7a5e9f41aadfad7495c0d47a4ed703b7 417 PANTHER PTHR11993 190 412 8.5E-242 T 23-04-2016 RBRH_RS09065 7a5e9f41aadfad7495c0d47a4ed703b7 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 1.4E-124 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 RBRH_RS09065 7a5e9f41aadfad7495c0d47a4ed703b7 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 23-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 RBRH_RS09065 7a5e9f41aadfad7495c0d47a4ed703b7 417 PANTHER PTHR11993:SF10 3 164 8.5E-242 T 23-04-2016 RBRH_RS09065 7a5e9f41aadfad7495c0d47a4ed703b7 417 PANTHER PTHR11993:SF10 190 412 8.5E-242 T 23-04-2016 RBRH_RS09065 7a5e9f41aadfad7495c0d47a4ed703b7 417 SUPERFAMILY SSF56762 16 417 1.44E-137 T 23-04-2016 IPR029014 NiFe hydrogenase-like RBRH_RS09065 7a5e9f41aadfad7495c0d47a4ed703b7 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 1.7E-187 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RBRH_RS09065 7a5e9f41aadfad7495c0d47a4ed703b7 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.187 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RBRH_RS09065 7a5e9f41aadfad7495c0d47a4ed703b7 417 Gene3D G3DSA:1.10.645.10 6 404 4.9E-66 T 23-04-2016 IPR029014 NiFe hydrogenase-like RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 450 462 1.4E-20 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 398 408 1.4E-20 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 307 322 1.4E-20 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 259 274 1.4E-20 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 431 446 1.4E-20 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 Gene3D G3DSA:1.10.390.10 444 592 1.3E-30 T 23-04-2016 RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 Pfam PF01433 Peptidase family M1 106 506 5.3E-68 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 SUPERFAMILY SSF63737 101 323 1.15E-34 T 23-04-2016 RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 SUPERFAMILY SSF55486 339 591 2.64E-59 T 23-04-2016 RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 PANTHER PTHR11533 36 203 5.2E-109 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RBRH_RS07910 87cac25f5107f27826dbbd95d80ef5ed 760 PANTHER PTHR11533 224 682 5.2E-109 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RBRH_RS02455 5a759601999ff6b59eff3b1a77b096b9 138 SUPERFAMILY SSF102400 1 136 1.96E-40 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RBRH_RS02455 5a759601999ff6b59eff3b1a77b096b9 138 PANTHER PTHR38767 7 138 7.4E-18 T 23-04-2016 RBRH_RS02455 5a759601999ff6b59eff3b1a77b096b9 138 Gene3D G3DSA:3.40.50.10110 1 136 3.1E-41 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RBRH_RS02455 5a759601999ff6b59eff3b1a77b096b9 138 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 131 2.1E-37 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RBRH_RS05685 ff0b7611f8b8bdc29bb0d4f6b6faf3ab 448 PANTHER PTHR11206 4 437 3.6E-98 T 23-04-2016 RBRH_RS05685 ff0b7611f8b8bdc29bb0d4f6b6faf3ab 448 Pfam PF01554 MatE 14 172 4.7E-27 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS05685 ff0b7611f8b8bdc29bb0d4f6b6faf3ab 448 Pfam PF01554 MatE 240 400 2.9E-26 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS05685 ff0b7611f8b8bdc29bb0d4f6b6faf3ab 448 PANTHER PTHR11206:SF153 4 437 3.6E-98 T 23-04-2016 RBRH_RS05685 ff0b7611f8b8bdc29bb0d4f6b6faf3ab 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 404 4.2E-81 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS05685 ff0b7611f8b8bdc29bb0d4f6b6faf3ab 448 PIRSF PIRSF006603 5 448 1.9E-62 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 177 0.0097 T 23-04-2016 RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.5E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.5E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.5E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.5E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.5E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.5E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 249 1.6E-61 T 23-04-2016 RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 Gene3D G3DSA:3.40.50.720 7 250 3.2E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 SUPERFAMILY SSF51735 12 250 7.49E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PANTHER PTHR24322 18 139 6.2E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PANTHER PTHR24322 155 183 6.2E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS06605 8d79f590b899bd8f54e663f0bceefff1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS08285 9bc12135465ac3d59a77ec80be3d56c2 176 SMART SM00271 6 71 8.1E-6 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS08285 9bc12135465ac3d59a77ec80be3d56c2 176 Gene3D G3DSA:1.10.287.110 5 77 6.7E-26 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS08285 9bc12135465ac3d59a77ec80be3d56c2 176 Pfam PF07743 HSCB C-terminal oligomerisation domain 92 167 1.4E-16 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RBRH_RS08285 9bc12135465ac3d59a77ec80be3d56c2 176 PANTHER PTHR14021:SF15 7 170 5.8E-47 T 23-04-2016 RBRH_RS08285 9bc12135465ac3d59a77ec80be3d56c2 176 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 6 174 23.82 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RBRH_RS08285 9bc12135465ac3d59a77ec80be3d56c2 176 Gene3D G3DSA:1.20.1280.20 86 173 2.7E-25 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RBRH_RS08285 9bc12135465ac3d59a77ec80be3d56c2 176 SUPERFAMILY SSF46565 7 79 2.88E-17 T 23-04-2016 IPR001623 DnaJ domain RBRH_RS08285 9bc12135465ac3d59a77ec80be3d56c2 176 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 18 172 8.1E-32 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RBRH_RS08285 9bc12135465ac3d59a77ec80be3d56c2 176 PANTHER PTHR14021 7 170 5.8E-47 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RBRH_RS08285 9bc12135465ac3d59a77ec80be3d56c2 176 SUPERFAMILY SSF47144 82 173 5.49E-22 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 Pfam PF00905 Penicillin binding protein transpeptidase domain 283 625 1.3E-66 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 251 3.3E-41 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 Gene3D G3DSA:3.90.1310.10 128 264 3.5E-36 T 23-04-2016 RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 Gene3D G3DSA:3.40.710.10 265 628 1.4E-107 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 SUPERFAMILY SSF56519 53 265 9.55E-47 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 17 628 1.6E-227 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 SUPERFAMILY SSF56601 266 628 2.05E-97 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 PANTHER PTHR30627 2 193 3.3E-209 T 23-04-2016 RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 PANTHER PTHR30627 209 631 3.3E-209 T 23-04-2016 RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 PANTHER PTHR30627:SF2 2 193 3.3E-209 T 23-04-2016 RBRH_RS12020 fb4fcbd83b9502c6b47916e3a1de6f88 663 PANTHER PTHR30627:SF2 209 631 3.3E-209 T 23-04-2016 RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 PRINTS PR01415 Ankyrin repeat signature 151 166 3.4E-8 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 PRINTS PR01415 Ankyrin repeat signature 199 213 3.4E-8 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 SUPERFAMILY SSF48403 58 236 1.02E-46 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 Gene3D G3DSA:1.25.40.20 59 251 5.5E-48 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 PANTHER PTHR24198 58 239 2.3E-44 T 23-04-2016 RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 SMART SM00248 183 212 1.5E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 SMART SM00248 120 149 0.018 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 SMART SM00248 86 116 3300.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 SMART SM00248 150 179 8.0E-6 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 SMART SM00248 53 82 3300.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 RBRH_RS06970 a35a3b411366e7f3f58f1b824fab6825 269 Pfam PF12796 Ankyrin repeats (3 copies) 135 214 2.0E-20 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain RBRH_RS09805 44f92e3cce2c5d9dbe2498a189ea097c 217 Gene3D G3DSA:3.40.50.150 2 215 2.6E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS09805 44f92e3cce2c5d9dbe2498a189ea097c 217 PANTHER PTHR11579:SF0 1 170 4.7E-38 T 23-04-2016 RBRH_RS09805 44f92e3cce2c5d9dbe2498a189ea097c 217 PANTHER PTHR11579 1 170 4.7E-38 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RBRH_RS09805 44f92e3cce2c5d9dbe2498a189ea097c 217 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RBRH_RS09805 44f92e3cce2c5d9dbe2498a189ea097c 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 207 1.8E-37 T 23-04-2016 RBRH_RS09805 44f92e3cce2c5d9dbe2498a189ea097c 217 SUPERFAMILY SSF53335 1 179 2.13E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS02085 f502e1582451f43632743e7522c79420 266 SUPERFAMILY SSF53098 101 261 5.69E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS02085 f502e1582451f43632743e7522c79420 266 PANTHER PTHR32552:SF26 33 258 8.5E-60 T 23-04-2016 RBRH_RS02085 f502e1582451f43632743e7522c79420 266 PANTHER PTHR32552 33 258 8.5E-60 T 23-04-2016 RBRH_RS02085 f502e1582451f43632743e7522c79420 266 Pfam PF00665 Integrase core domain 107 221 4.0E-31 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RBRH_RS02085 f502e1582451f43632743e7522c79420 266 Gene3D G3DSA:3.30.420.10 102 258 5.2E-52 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 PANTHER PTHR11707:SF29 11 330 7.2E-77 T 23-04-2016 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 PIRSF PIRSF001220 8 342 1.1E-83 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 SUPERFAMILY SSF53774 7 339 3.53E-94 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 PANTHER PTHR11707 11 330 7.2E-77 T 23-04-2016 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 Gene3D G3DSA:3.40.50.40 229 340 4.0E-36 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 10 342 1.2E-117 T 23-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 PIRSF PIRSF500176 9 341 8.2E-78 T 23-04-2016 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 PRINTS PR00139 Asparaginase/glutaminase family signature 93 111 1.8E-21 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 PRINTS PR00139 Asparaginase/glutaminase family signature 13 24 1.8E-21 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 PRINTS PR00139 Asparaginase/glutaminase family signature 275 293 1.8E-21 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 SMART SM00870 12 335 4.2E-129 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 Gene3D G3DSA:3.40.50.1170 10 220 1.5E-68 T 23-04-2016 IPR027474 L-asparaginase, N-terminal RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 15 23 - T 23-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 Pfam PF00710 Asparaginase, N-terminal 13 205 4.4E-58 T 23-04-2016 IPR027474 L-asparaginase, N-terminal RBRH_RS05960 9b4ee23bb6f4907aca70f10d89b83c7f 342 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 94 104 - T 23-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 RBRH_RS05700 c36f631df010a6ffdcb3897f29124bfb 279 PANTHER PTHR30164 5 266 5.5E-79 T 23-04-2016 RBRH_RS05700 c36f631df010a6ffdcb3897f29124bfb 279 Pfam PF06167 Glucose-regulated metallo-peptidase M90 11 264 1.4E-94 T 23-04-2016 IPR010384 MtfA family RBRH_RS05700 c36f631df010a6ffdcb3897f29124bfb 279 SUPERFAMILY SSF55486 45 266 2.56E-43 T 23-04-2016 RBRH_RS05700 c36f631df010a6ffdcb3897f29124bfb 279 Gene3D G3DSA:3.40.390.10 41 265 2.8E-36 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RBRH_RS00460 3445bc0ded258d55b4d6d6f8b9411399 100 SUPERFAMILY SSF55248 1 96 1.18E-32 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RBRH_RS00460 3445bc0ded258d55b4d6d6f8b9411399 100 PANTHER PTHR12599 2 95 1.7E-46 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RBRH_RS00460 3445bc0ded258d55b4d6d6f8b9411399 100 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 23.307 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RBRH_RS00460 3445bc0ded258d55b4d6d6f8b9411399 100 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 3 94 4.8E-30 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RBRH_RS00460 3445bc0ded258d55b4d6d6f8b9411399 100 Gene3D G3DSA:3.30.1360.20 2 96 3.3E-35 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RBRH_RS00460 3445bc0ded258d55b4d6d6f8b9411399 100 PANTHER PTHR12599:SF7 2 95 1.7E-46 T 23-04-2016 RBRH_RS11765 6dc2b71c133143a0e4a07cfa18d4ece2 258 PANTHER PTHR30292 1 247 9.3E-123 T 23-04-2016 RBRH_RS11765 6dc2b71c133143a0e4a07cfa18d4ece2 258 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.855 T 23-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RBRH_RS11765 6dc2b71c133143a0e4a07cfa18d4ece2 258 Pfam PF03746 LamB/YcsF family 3 235 1.6E-93 T 23-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RBRH_RS11765 6dc2b71c133143a0e4a07cfa18d4ece2 258 PANTHER PTHR30292:SF0 1 247 9.3E-123 T 23-04-2016 RBRH_RS11765 6dc2b71c133143a0e4a07cfa18d4ece2 258 SUPERFAMILY SSF88713 1 243 5.56E-93 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 672 3.2E-241 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 Pfam PF00361 Proton-conducting membrane transporter 144 426 7.7E-84 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 82 132 1.1E-24 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 Pfam PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus 480 575 3.3E-7 T 23-04-2016 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal KEGG: 00624+1.6.5.- RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PANTHER PTHR22773:SF50 1 626 7.6E-254 T 23-04-2016 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 436 458 5.1E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 282 304 5.1E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 95 115 5.1E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 93 118 6.9E-65 T 23-04-2016 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 264 290 6.9E-65 T 23-04-2016 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 437 456 6.9E-65 T 23-04-2016 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 121 141 6.9E-65 T 23-04-2016 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 168 189 6.9E-65 T 23-04-2016 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 263 6.9E-65 T 23-04-2016 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 332 344 6.9E-65 T 23-04-2016 RBRH_RS09025 c9a982d04656aac677956a6624684cfb 677 PANTHER PTHR22773 1 626 7.6E-254 T 23-04-2016 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 901 0.0 T 23-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 Gene3D G3DSA:1.25.50.10 567 902 1.8E-128 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 181 196 3.7E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 263 273 3.7E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 299 314 3.7E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 131 146 3.7E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 318 330 3.7E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 Pfam PF11940 Domain of unknown function (DUF3458) 471 859 4.1E-148 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 SUPERFAMILY SSF63737 7 197 2.09E-39 T 23-04-2016 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 SUPERFAMILY SSF55486 210 462 1.01E-71 T 23-04-2016 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 Pfam PF01433 Peptidase family M1 120 396 1.2E-61 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 Gene3D G3DSA:1.10.390.10 313 463 1.7E-28 T 23-04-2016 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 PANTHER PTHR11533:SF152 630 901 0.0 T 23-04-2016 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 PANTHER PTHR11533:SF152 10 606 0.0 T 23-04-2016 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 PANTHER PTHR11533 630 901 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RBRH_RS02815 aea06308b67af3e70b83a852c2585546 902 PANTHER PTHR11533 10 606 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RBRH_RS03020 146522707e9be9cd50a9fd8a6f7873c8 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 2.2E-17 T 23-04-2016 IPR000286 Histone deacetylase superfamily RBRH_RS03020 146522707e9be9cd50a9fd8a6f7873c8 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 2.2E-17 T 23-04-2016 IPR000286 Histone deacetylase superfamily RBRH_RS03020 146522707e9be9cd50a9fd8a6f7873c8 307 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 2.2E-17 T 23-04-2016 IPR000286 Histone deacetylase superfamily RBRH_RS03020 146522707e9be9cd50a9fd8a6f7873c8 307 Pfam PF00850 Histone deacetylase domain 20 304 3.1E-79 T 23-04-2016 IPR023801 Histone deacetylase domain RBRH_RS03020 146522707e9be9cd50a9fd8a6f7873c8 307 SUPERFAMILY SSF52768 2 306 2.11E-106 T 23-04-2016 RBRH_RS03020 146522707e9be9cd50a9fd8a6f7873c8 307 Gene3D G3DSA:3.40.800.20 2 305 4.0E-106 T 23-04-2016 IPR023801 Histone deacetylase domain RBRH_RS03020 146522707e9be9cd50a9fd8a6f7873c8 307 PANTHER PTHR10625 1 306 9.4E-96 T 23-04-2016 IPR000286 Histone deacetylase superfamily RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 Gene3D G3DSA:3.20.20.70 5 264 1.0E-58 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 Pfam PF07836 DmpG-like communication domain 276 335 5.2E-31 T 23-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 PANTHER PTHR10277 5 336 2.7E-121 T 23-04-2016 RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 6 335 1.9E-179 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 336 222.306 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 Gene3D G3DSA:1.10.8.60 277 335 4.0E-33 T 23-04-2016 RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 PANTHER PTHR10277:SF3 5 336 2.7E-121 T 23-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 SUPERFAMILY SSF89000 290 335 1.8E-18 T 23-04-2016 RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 SUPERFAMILY SSF51569 4 278 7.14E-67 T 23-04-2016 RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 274 335 9.0E-27 T 23-04-2016 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 RBRH_RS08680 0698ba89a141750bfe2198a16f4a9fb5 336 Pfam PF00682 HMGL-like 8 264 4.3E-74 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RBRH_RS04510 480a8dbf90c9364acf5ec8849eb50bca 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.2E-30 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04510 480a8dbf90c9364acf5ec8849eb50bca 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.133 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04510 480a8dbf90c9364acf5ec8849eb50bca 121 PANTHER PTHR10871 1 115 3.1E-58 T 23-04-2016 RBRH_RS04510 480a8dbf90c9364acf5ec8849eb50bca 121 Gene3D G3DSA:4.10.910.10 72 121 1.5E-24 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal RBRH_RS04510 480a8dbf90c9364acf5ec8849eb50bca 121 PIRSF PIRSF002134 1 121 1.7E-39 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04510 480a8dbf90c9364acf5ec8849eb50bca 121 Gene3D G3DSA:1.10.8.50 1 71 4.2E-26 T 23-04-2016 RBRH_RS04510 480a8dbf90c9364acf5ec8849eb50bca 121 SUPERFAMILY SSF46946 2 114 1.06E-42 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RBRH_RS04510 480a8dbf90c9364acf5ec8849eb50bca 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.5E-50 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04510 480a8dbf90c9364acf5ec8849eb50bca 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 RBRH_RS12145 6f5a698836e5cbcdd79cbd5963ac7ee8 337 Gene3D G3DSA:3.40.50.720 114 297 6.5E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS12145 6f5a698836e5cbcdd79cbd5963ac7ee8 337 Gene3D G3DSA:3.40.50.720 1 113 1.3E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS12145 6f5a698836e5cbcdd79cbd5963ac7ee8 337 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 23 327 1.5E-16 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RBRH_RS12145 6f5a698836e5cbcdd79cbd5963ac7ee8 337 SUPERFAMILY SSF52283 1 137 7.02E-21 T 23-04-2016 RBRH_RS12145 6f5a698836e5cbcdd79cbd5963ac7ee8 337 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 296 4.9E-50 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RBRH_RS12145 6f5a698836e5cbcdd79cbd5963ac7ee8 337 SUPERFAMILY SSF51735 106 297 1.1E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS12145 6f5a698836e5cbcdd79cbd5963ac7ee8 337 PANTHER PTHR10996:SF127 1 321 1.0E-96 T 23-04-2016 RBRH_RS12145 6f5a698836e5cbcdd79cbd5963ac7ee8 337 PANTHER PTHR10996 1 321 1.0E-96 T 23-04-2016 RBRH_RS09060 dfa5b094375e6682ebd6610c7b6d17ac 158 PIRSF PIRSF000216 1 158 1.5E-58 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RBRH_RS09060 dfa5b094375e6682ebd6610c7b6d17ac 158 PANTHER PTHR10371 3 158 8.1E-60 T 23-04-2016 RBRH_RS09060 dfa5b094375e6682ebd6610c7b6d17ac 158 Gene3D G3DSA:3.40.30.10 76 155 3.2E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS09060 dfa5b094375e6682ebd6610c7b6d17ac 158 PANTHER PTHR10371:SF3 3 158 8.1E-60 T 23-04-2016 RBRH_RS09060 dfa5b094375e6682ebd6610c7b6d17ac 158 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 156 3.7E-52 T 23-04-2016 RBRH_RS09060 dfa5b094375e6682ebd6610c7b6d17ac 158 SUPERFAMILY SSF52833 4 156 1.57E-52 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS09060 dfa5b094375e6682ebd6610c7b6d17ac 158 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 156 1.8E-60 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RBRH_RS08450 849f462c66a881ce5545bca2bc235d31 83 Gene3D G3DSA:3.40.190.10 24 47 9.2E-5 T 23-04-2016 RBRH_RS03010 7c198c78bdf2e6d666634af7cc86ae1c 300 PANTHER PTHR10314 1 298 6.1E-157 T 23-04-2016 RBRH_RS03010 7c198c78bdf2e6d666634af7cc86ae1c 300 PANTHER PTHR10314:SF100 1 298 6.1E-157 T 23-04-2016 RBRH_RS03010 7c198c78bdf2e6d666634af7cc86ae1c 300 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 298 2.8E-131 T 23-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RBRH_RS03010 7c198c78bdf2e6d666634af7cc86ae1c 300 Gene3D G3DSA:3.40.50.1100 152 298 6.0E-78 T 23-04-2016 RBRH_RS03010 7c198c78bdf2e6d666634af7cc86ae1c 300 Gene3D G3DSA:3.40.50.1100 1 45 6.0E-78 T 23-04-2016 RBRH_RS03010 7c198c78bdf2e6d666634af7cc86ae1c 300 SUPERFAMILY SSF53686 2 298 1.27E-86 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RBRH_RS03010 7c198c78bdf2e6d666634af7cc86ae1c 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RBRH_RS03010 7c198c78bdf2e6d666634af7cc86ae1c 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 287 4.2E-62 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RBRH_RS03010 7c198c78bdf2e6d666634af7cc86ae1c 300 Gene3D G3DSA:3.40.50.1100 46 146 1.5E-37 T 23-04-2016 RBRH_RS03010 7c198c78bdf2e6d666634af7cc86ae1c 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 298 5.4E-115 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RBRH_RS00715 b372a2ed28f661c5c407f1d1704871c0 169 PANTHER PTHR35861 1 169 3.0E-60 T 23-04-2016 RBRH_RS00715 b372a2ed28f661c5c407f1d1704871c0 169 Pfam PF04985 Phage tail tube protein FII 4 168 2.0E-59 T 23-04-2016 IPR006498 Tail tube protein RBRH_RS00715 b372a2ed28f661c5c407f1d1704871c0 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 169 3.5E-53 T 23-04-2016 IPR006498 Tail tube protein RBRH_RS00715 b372a2ed28f661c5c407f1d1704871c0 169 PANTHER PTHR35861:SF2 1 169 3.0E-60 T 23-04-2016 RBRH_RS03630 1790718da7f5ae8b50f9b13b2ac80f20 343 Pfam PF12849 PBP superfamily domain 22 303 3.3E-56 T 23-04-2016 IPR024370 PBP domain RBRH_RS03630 1790718da7f5ae8b50f9b13b2ac80f20 343 PANTHER PTHR30570 21 331 6.1E-127 T 23-04-2016 RBRH_RS03630 1790718da7f5ae8b50f9b13b2ac80f20 343 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 332 6.1E-133 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RBRH_RS03630 1790718da7f5ae8b50f9b13b2ac80f20 343 PANTHER PTHR30570:SF0 21 331 6.1E-127 T 23-04-2016 RBRH_RS03630 1790718da7f5ae8b50f9b13b2ac80f20 343 SUPERFAMILY SSF53850 25 331 4.1E-94 T 23-04-2016 RBRH_RS03630 1790718da7f5ae8b50f9b13b2ac80f20 343 PIRSF PIRSF002756 4 334 3.3E-103 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RBRH_RS03630 1790718da7f5ae8b50f9b13b2ac80f20 343 Gene3D G3DSA:3.40.190.10 177 333 1.1E-32 T 23-04-2016 RBRH_RS03630 1790718da7f5ae8b50f9b13b2ac80f20 343 Gene3D G3DSA:3.40.190.10 23 173 3.7E-51 T 23-04-2016 RBRH_RS04760 c212ced2b27e8d4a764e7156c009660f 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 355 53.241 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RBRH_RS04760 c212ced2b27e8d4a764e7156c009660f 356 Pfam PF00155 Aminotransferase class I and II 76 350 1.0E-40 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RBRH_RS04760 c212ced2b27e8d4a764e7156c009660f 356 SUPERFAMILY SSF53383 11 355 1.36E-71 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS04760 c212ced2b27e8d4a764e7156c009660f 356 Gene3D G3DSA:3.40.640.10 46 255 4.0E-57 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS04760 c212ced2b27e8d4a764e7156c009660f 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 353 5.2E-91 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RBRH_RS04760 c212ced2b27e8d4a764e7156c009660f 356 PANTHER PTHR11751 7 353 4.9E-60 T 23-04-2016 RBRH_RS04760 c212ced2b27e8d4a764e7156c009660f 356 PANTHER PTHR11751:SF398 7 353 4.9E-60 T 23-04-2016 RBRH_RS04760 c212ced2b27e8d4a764e7156c009660f 356 Gene3D G3DSA:3.90.1150.10 256 355 8.7E-23 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 Gene3D G3DSA:2.120.10.90 523 730 1.1E-21 T 23-04-2016 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 16 763 3.3E-235 T 23-04-2016 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 39 495 2.1E-132 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 PANTHER PTHR10169:SF30 298 549 6.2E-211 T 23-04-2016 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 PANTHER PTHR10169:SF30 16 274 6.2E-211 T 23-04-2016 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 SUPERFAMILY SSF56719 38 512 6.15E-151 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 SUPERFAMILY SSF101904 527 764 2.75E-40 T 23-04-2016 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 11 771 33.321 T 23-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 Gene3D G3DSA:3.30.1360.40 244 360 2.6E-21 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 Gene3D G3DSA:3.90.199.10 38 243 2.4E-110 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 Gene3D G3DSA:3.90.199.10 362 427 2.4E-110 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 PANTHER PTHR10169 298 549 6.2E-211 T 23-04-2016 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 PANTHER PTHR10169 16 274 6.2E-211 T 23-04-2016 RBRH_RS09535 b68f6e02026ded06ec6ee8b2e73a2b9f 778 SMART SM00434 18 490 6.1E-227 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 SUPERFAMILY SSF55874 272 412 6.42E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 SMART SM00387 307 414 3.3E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 SUPERFAMILY SSF47384 197 235 5.1E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 SMART SM00388 201 270 1.6E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 Gene3D G3DSA:3.30.565.10 287 412 3.4E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 411 4.8E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 PANTHER PTHR24423 178 411 4.7E-18 T 23-04-2016 RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 PANTHER PTHR24423 18 29 4.7E-18 T 23-04-2016 RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 3.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 3.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS11940 a188ba94d8d4b8159400170326c3d075 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 389 3.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS00265 1437b029e91c5408bf1eaf3d93b8e2a7 385 PANTHER PTHR11496 1 385 6.8E-120 T 23-04-2016 RBRH_RS00265 1437b029e91c5408bf1eaf3d93b8e2a7 385 Gene3D G3DSA:3.40.50.1970 3 185 1.9E-45 T 23-04-2016 RBRH_RS00265 1437b029e91c5408bf1eaf3d93b8e2a7 385 Gene3D G3DSA:1.20.1090.10 186 385 2.7E-67 T 23-04-2016 RBRH_RS00265 1437b029e91c5408bf1eaf3d93b8e2a7 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 376 1.3E-109 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 RBRH_RS00265 1437b029e91c5408bf1eaf3d93b8e2a7 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RBRH_RS00265 1437b029e91c5408bf1eaf3d93b8e2a7 385 PANTHER PTHR11496:SF68 1 385 6.8E-120 T 23-04-2016 RBRH_RS00265 1437b029e91c5408bf1eaf3d93b8e2a7 385 SUPERFAMILY SSF56796 4 385 7.72E-112 T 23-04-2016 RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 Pfam PF03466 LysR substrate binding domain 88 272 7.1E-18 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 SUPERFAMILY SSF53850 90 273 2.71E-20 T 23-04-2016 RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 Gene3D G3DSA:3.40.190.10 81 167 6.1E-6 T 23-04-2016 RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 Gene3D G3DSA:1.10.10.10 1 80 1.2E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 SUPERFAMILY SSF46785 1 85 2.95E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 PANTHER PTHR30126:SF2 1 298 1.1E-74 T 23-04-2016 RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 Gene3D G3DSA:3.40.190.10 227 265 2.2E-5 T 23-04-2016 RBRH_RS10755 87cc64e1388db834765be6ee62881a23 316 PANTHER PTHR30126 1 298 1.1E-74 T 23-04-2016 RBRH_RS04625 52bb653ad3172b2bd88eeb32ed74106b 247 SUPERFAMILY SSF51695 6 241 1.78E-56 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RBRH_RS04625 52bb653ad3172b2bd88eeb32ed74106b 247 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 239 1.5E-35 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RBRH_RS04625 52bb653ad3172b2bd88eeb32ed74106b 247 PANTHER PTHR23344:SF20 3 241 2.6E-61 T 23-04-2016 RBRH_RS04625 52bb653ad3172b2bd88eeb32ed74106b 247 Gene3D G3DSA:3.20.20.190 4 241 5.4E-55 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RBRH_RS04625 52bb653ad3172b2bd88eeb32ed74106b 247 PANTHER PTHR23344 3 241 2.6E-61 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 PANTHER PTHR24095 4 871 0.0 T 23-04-2016 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 ProSitePatterns PS00012 Phosphopantetheine attachment site. 364 379 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 SUPERFAMILY SSF52777 610 857 1.56E-67 T 23-04-2016 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 SMART SM00823 Phosphopantetheine attachment site 340 408 0.0049 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 Pfam PF13193 AMP-binding enzyme C-terminal domain 239 313 8.1E-13 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 SUPERFAMILY SSF52777 429 605 8.56E-48 T 23-04-2016 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 SUPERFAMILY SSF47336 332 404 3.66E-19 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 Pfam PF00550 Phosphopantetheine attachment site 342 403 2.4E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 Gene3D G3DSA:3.40.50.980 6 142 1.3E-34 T 23-04-2016 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 Pfam PF00501 AMP-binding enzyme 7 231 1.1E-53 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 Gene3D G3DSA:3.30.300.30 226 342 2.6E-44 T 23-04-2016 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 Gene3D G3DSA:1.10.1200.10 343 406 5.6E-26 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 Pfam PF00668 Condensation domain 425 724 4.1E-75 T 23-04-2016 IPR001242 Condensation domain RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 Pfam PF13745 HxxPF-repeated domain 746 835 2.4E-31 T 23-04-2016 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 Gene3D G3DSA:2.30.38.10 143 221 3.3E-31 T 23-04-2016 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 PANTHER PTHR24095:SF43 4 871 0.0 T 23-04-2016 RBRH_RS06840 39ddc7aec7447b5dd9da9f662e357c17 872 SUPERFAMILY SSF56801 5 353 2.22E-106 T 23-04-2016 RBRH_RS04490 a553201d16b7f6ca0fd3ec1f3cec988b 144 SUPERFAMILY SSF52080 4 142 1.96E-45 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P RBRH_RS04490 a553201d16b7f6ca0fd3ec1f3cec988b 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 23-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04490 a553201d16b7f6ca0fd3ec1f3cec988b 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 1.6E-46 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RBRH_RS04490 a553201d16b7f6ca0fd3ec1f3cec988b 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 19.944 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RBRH_RS04490 a553201d16b7f6ca0fd3ec1f3cec988b 144 Gene3D G3DSA:3.100.10.10 32 142 4.3E-25 T 23-04-2016 RBRH_RS04490 a553201d16b7f6ca0fd3ec1f3cec988b 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 6.7E-30 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P RBRH_RS04490 a553201d16b7f6ca0fd3ec1f3cec988b 144 PANTHER PTHR12934 1 142 1.1E-63 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RBRH_RS04055 942efbb8ca6509ec29210258aa8a4b8d 104 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 4 88 9.0E-10 T 23-04-2016 IPR007633 Bacteriophage P2, GpY, holin RBRH_RS04055 942efbb8ca6509ec29210258aa8a4b8d 104 Pfam PF04550 Phage holin family 2 4 89 1.0E-33 T 23-04-2016 IPR007633 Bacteriophage P2, GpY, holin RBRH_RS04225 47045d6a35c3ce0ce2ae41ef35e424c0 451 SUPERFAMILY SSF81383 54 100 4.58E-6 T 23-04-2016 IPR001810 F-box domain GO:0005515 RBRH_RS04225 47045d6a35c3ce0ce2ae41ef35e424c0 451 Pfam PF00646 F-box domain 56 95 3.1E-4 T 23-04-2016 IPR001810 F-box domain GO:0005515 RBRH_RS04225 47045d6a35c3ce0ce2ae41ef35e424c0 451 Gene3D G3DSA:1.20.1280.50 55 106 2.1E-4 T 23-04-2016 RBRH_RS07480 c5ac69452eb5fdd9142388fe97c9b22d 894 Gene3D G3DSA:2.40.50.230 579 638 1.2E-8 T 23-04-2016 IPR006531 Gp5 N-terminal RBRH_RS07480 c5ac69452eb5fdd9142388fe97c9b22d 894 SUPERFAMILY SSF69279 216 376 1.06E-15 T 23-04-2016 RBRH_RS07480 c5ac69452eb5fdd9142388fe97c9b22d 894 Pfam PF05954 Phage late control gene D protein (GPD) 251 533 3.0E-11 T 23-04-2016 RBRH_RS07480 c5ac69452eb5fdd9142388fe97c9b22d 894 SUPERFAMILY SSF69255 559 638 2.22E-12 T 23-04-2016 RBRH_RS07480 c5ac69452eb5fdd9142388fe97c9b22d 894 Gene3D G3DSA:3.55.50.10 298 376 8.3E-11 T 23-04-2016 RBRH_RS06195 0a03aced739b582071c625786c2fd027 152 Gene3D G3DSA:2.30.30.180 77 142 5.2E-16 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RBRH_RS06195 0a03aced739b582071c625786c2fd027 152 Gene3D G3DSA:3.30.300.70 2 70 2.3E-18 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RBRH_RS06195 0a03aced739b582071c625786c2fd027 152 PANTHER PTHR33867 2 144 2.8E-34 T 23-04-2016 RBRH_RS06195 0a03aced739b582071c625786c2fd027 152 SUPERFAMILY SSF75420 2 73 1.44E-16 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RBRH_RS06195 0a03aced739b582071c625786c2fd027 152 SUPERFAMILY SSF74942 74 146 2.09E-16 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RBRH_RS06195 0a03aced739b582071c625786c2fd027 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 145 22.653 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RBRH_RS06195 0a03aced739b582071c625786c2fd027 152 PANTHER PTHR33867:SF1 2 144 2.8E-34 T 23-04-2016 RBRH_RS06195 0a03aced739b582071c625786c2fd027 152 Pfam PF02576 Putative ribosome maturation factor RimP 6 141 4.7E-37 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 274 5.5E-144 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 56.62 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 Gene3D G3DSA:2.160.10.10 91 257 2.4E-62 T 23-04-2016 RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 PANTHER PTHR19136:SF52 15 273 3.5E-127 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 Gene3D G3DSA:1.10.166.10 2 70 4.0E-32 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 2.7E-14 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 168 0.0022 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 70 4.2E-27 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 SUPERFAMILY SSF51161 4 258 1.07E-74 T 23-04-2016 IPR011004 Trimeric LpxA-like RBRH_RS06390 cded6853a2212a7b88feee02196a59c7 275 PANTHER PTHR19136 15 273 3.5E-127 T 23-04-2016 RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 Pfam PF13167 GTP-binding GTPase N-terminal 18 105 3.1E-30 T 23-04-2016 IPR025121 GTPase HflX, N-terminal RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 Pfam PF01926 50S ribosome-binding GTPase 193 311 1.3E-21 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 PANTHER PTHR10229 15 355 3.0E-157 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 Hamap MF_00900 GTPase HflX [hflX]. 20 374 45.789 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 Pfam PF16360 GTP-binding GTPase Middle Region 107 185 1.4E-29 T 23-04-2016 IPR032305 GTP-binding protein, middle domain RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 214 232 9.0E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 193 213 9.0E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 260 278 9.0E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 Gene3D G3DSA:3.40.50.300 189 356 1.3E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 4 355 3.8E-150 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 SUPERFAMILY SSF52540 191 359 1.95E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 PIRSF PIRSF006809 2 365 2.5E-139 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 190 353 2.2E-12 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS05825 8900ddd9537f018db5371d9071a8dbc6 415 PANTHER PTHR10229:SF0 15 355 3.0E-157 T 23-04-2016 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PANTHER PTHR11405:SF16 42 353 6.4E-122 T 23-04-2016 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 203 346 3.2E-23 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PANTHER PTHR11405 42 353 6.4E-122 T 23-04-2016 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 50 194 2.8E-36 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 SUPERFAMILY SSF53671 49 352 1.31E-92 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 50 349 7.7E-89 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 124 133 3.1E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 266 275 3.1E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 307 312 3.1E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 331 345 3.1E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 181 198 3.1E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PRINTS PR00101 Aspartate carbamoyltransferase signature 86 108 3.1E-28 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 96 103 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 96 115 1.3E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 303 312 1.3E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 182 193 1.3E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 315 338 1.3E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 Gene3D G3DSA:3.40.50.1370 194 329 1.2E-48 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 49 352 40.626 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS09980 207f8d827d7d7b0be2aa2695e2a7b1d9 354 Gene3D G3DSA:3.40.50.1370 50 193 5.4E-49 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RBRH_RS02345 fdc0928d64668c615ae85b4babe085f3 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 254 1.6E-10 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RBRH_RS02345 fdc0928d64668c615ae85b4babe085f3 258 Pfam PF00005 ABC transporter 23 183 9.5E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS02345 fdc0928d64668c615ae85b4babe085f3 258 Gene3D G3DSA:3.40.50.300 5 252 7.7E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02345 fdc0928d64668c615ae85b4babe085f3 258 SMART SM00382 32 231 4.5E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS02345 fdc0928d64668c615ae85b4babe085f3 258 PANTHER PTHR24220 130 256 1.6E-112 T 23-04-2016 RBRH_RS02345 fdc0928d64668c615ae85b4babe085f3 258 PANTHER PTHR24220 9 114 1.6E-112 T 23-04-2016 RBRH_RS02345 fdc0928d64668c615ae85b4babe085f3 258 SUPERFAMILY SSF52540 7 254 2.11E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02345 fdc0928d64668c615ae85b4babe085f3 258 PANTHER PTHR24220:SF358 130 256 1.6E-112 T 23-04-2016 RBRH_RS02345 fdc0928d64668c615ae85b4babe085f3 258 PANTHER PTHR24220:SF358 9 114 1.6E-112 T 23-04-2016 RBRH_RS06930 d6e4969832fd521c35e094a6de6e5118 184 SUPERFAMILY SSF52540 1 83 6.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06930 d6e4969832fd521c35e094a6de6e5118 184 SUPERFAMILY SSF52540 105 151 1.3E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06930 d6e4969832fd521c35e094a6de6e5118 184 Gene3D G3DSA:3.40.50.300 104 148 2.7E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06930 d6e4969832fd521c35e094a6de6e5118 184 PANTHER PTHR24220:SF308 1 87 3.3E-25 T 23-04-2016 RBRH_RS06930 d6e4969832fd521c35e094a6de6e5118 184 PANTHER PTHR24220 1 87 3.3E-25 T 23-04-2016 RBRH_RS06930 d6e4969832fd521c35e094a6de6e5118 184 Gene3D G3DSA:3.40.50.300 1 82 8.6E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07030 8329bcc3d464db6f0d7a15c4b8048f2e 100 SUPERFAMILY SSF54909 2 100 3.72E-25 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RBRH_RS07030 8329bcc3d464db6f0d7a15c4b8048f2e 100 Gene3D G3DSA:3.30.70.900 2 100 3.0E-32 T 23-04-2016 RBRH_RS07030 8329bcc3d464db6f0d7a15c4b8048f2e 100 PANTHER PTHR37832 1 99 6.2E-17 T 23-04-2016 RBRH_RS07030 8329bcc3d464db6f0d7a15c4b8048f2e 100 PANTHER PTHR37832:SF1 1 99 6.2E-17 T 23-04-2016 RBRH_RS07030 8329bcc3d464db6f0d7a15c4b8048f2e 100 SMART SM00886 2 100 7.1E-35 T 23-04-2016 IPR013097 Stress responsive alpha-beta barrel RBRH_RS07030 8329bcc3d464db6f0d7a15c4b8048f2e 100 Pfam PF07876 Stress responsive A/B Barrel Domain 2 99 5.6E-24 T 23-04-2016 IPR013097 Stress responsive alpha-beta barrel RBRH_RS08960 828611f4da5d6c63b490397fad59c1cc 328 SUPERFAMILY SSF142338 5 310 2.35E-74 T 23-04-2016 RBRH_RS08960 828611f4da5d6c63b490397fad59c1cc 328 TIGRFAM TIGR01819 F420_cofD: 2-phospho-L-lactate transferase 5 307 1.2E-90 T 23-04-2016 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198|UniPathway: UPA00071 RBRH_RS08960 828611f4da5d6c63b490397fad59c1cc 328 PANTHER PTHR30135 5 307 7.1E-85 T 23-04-2016 RBRH_RS08960 828611f4da5d6c63b490397fad59c1cc 328 Gene3D G3DSA:3.40.50.10680 88 316 1.3E-57 T 23-04-2016 RBRH_RS08960 828611f4da5d6c63b490397fad59c1cc 328 Pfam PF01933 Uncharacterised protein family UPF0052 5 284 3.4E-44 T 23-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 RBRH_RS08960 828611f4da5d6c63b490397fad59c1cc 328 Hamap MF_01257 2-phospho-L-lactate transferase [cofD]. 1 328 100.943 T 23-04-2016 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198|UniPathway: UPA00071 RBRH_RS08960 828611f4da5d6c63b490397fad59c1cc 328 PANTHER PTHR30135:SF2 5 307 7.1E-85 T 23-04-2016 RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 196 3.4E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 3.4E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 109 3.4E-5 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 SUPERFAMILY SSF51735 22 265 4.24E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PANTHER PTHR24322:SF211 177 208 3.6E-36 T 23-04-2016 RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PANTHER PTHR24322:SF211 26 161 3.6E-36 T 23-04-2016 RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PANTHER PTHR24322 177 208 3.6E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PANTHER PTHR24322 26 161 3.6E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 263 5.2E-36 T 23-04-2016 RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 Gene3D G3DSA:3.40.50.720 22 264 3.4E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 5.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 109 5.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 5.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 196 5.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00980 800cbaf47a457ef4e2c400e78ccadecf 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 214 5.1E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS09840 0c200bc4fbfd3e00504fc3df3fc7e60d 418 PANTHER PTHR30250 4 416 2.5E-14 T 23-04-2016 RBRH_RS09840 0c200bc4fbfd3e00504fc3df3fc7e60d 418 Pfam PF13440 Polysaccharide biosynthesis protein 91 331 4.8E-11 T 23-04-2016 RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 9.2E-4 T 23-04-2016 RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 Gene3D G3DSA:3.40.50.720 2 245 8.7E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 2.7E-122 T 23-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 Pfam PF00106 short chain dehydrogenase 5 197 6.9E-62 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.7E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.7E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.7E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PANTHER PTHR24322 153 185 5.8E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PANTHER PTHR24322 8 137 5.8E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.5E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.5E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.5E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.5E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.5E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.5E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PANTHER PTHR24322:SF328 153 185 5.8E-53 T 23-04-2016 RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 PANTHER PTHR24322:SF328 8 137 5.8E-53 T 23-04-2016 RBRH_RS05910 433a0c1f86b50589b557db2034ea811c 246 SUPERFAMILY SSF51735 4 245 4.47E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 Gene3D G3DSA:3.40.190.10 119 207 1.8E-38 T 23-04-2016 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 14 306 2.9E-101 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 PRINTS PR00151 Porphobilinogen deaminase signature 84 103 4.0E-46 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 PRINTS PR00151 Porphobilinogen deaminase signature 238 255 4.0E-46 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 PRINTS PR00151 Porphobilinogen deaminase signature 132 149 4.0E-46 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 PRINTS PR00151 Porphobilinogen deaminase signature 151 168 4.0E-46 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 PRINTS PR00151 Porphobilinogen deaminase signature 53 73 4.0E-46 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 SUPERFAMILY SSF54782 229 317 2.48E-20 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 14 218 1.7E-74 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 Gene3D G3DSA:3.30.160.40 229 316 9.3E-22 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 239 255 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 13 308 36.246 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 PIRSF PIRSF001438 2 322 1.1E-111 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 SUPERFAMILY SSF53850 13 226 1.81E-79 T 23-04-2016 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 234 305 2.7E-13 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 PANTHER PTHR11557 12 313 3.8E-134 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 PANTHER PTHR11557:SF0 12 313 3.8E-134 T 23-04-2016 RBRH_RS16135 ae9aa034e9f80d6b4f1a68961eef1b6b 326 Gene3D G3DSA:3.40.190.10 13 118 4.3E-45 T 23-04-2016 RBRH_RS11905 db5024e41663ab708352d2f28f2b9335 312 PANTHER PTHR30349:SF17 10 308 8.9E-111 T 23-04-2016 RBRH_RS11905 db5024e41663ab708352d2f28f2b9335 312 Gene3D G3DSA:1.10.443.10 110 298 1.2E-50 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS11905 db5024e41663ab708352d2f28f2b9335 312 SUPERFAMILY SSF56349 8 298 7.65E-54 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RBRH_RS11905 db5024e41663ab708352d2f28f2b9335 312 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 10 306 1.3E-101 T 23-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 RBRH_RS11905 db5024e41663ab708352d2f28f2b9335 312 PANTHER PTHR30349 10 308 8.9E-111 T 23-04-2016 RBRH_RS11905 db5024e41663ab708352d2f28f2b9335 312 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 85 4.0E-17 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RBRH_RS11905 db5024e41663ab708352d2f28f2b9335 312 Gene3D G3DSA:1.10.150.130 6 98 1.5E-20 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RBRH_RS11905 db5024e41663ab708352d2f28f2b9335 312 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 304 33.002 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RBRH_RS11905 db5024e41663ab708352d2f28f2b9335 312 Pfam PF00589 Phage integrase family 111 290 2.1E-40 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS09275 5c4bc77050d056c93d36083232238656 143 PANTHER PTHR33498 32 137 1.1E-16 T 23-04-2016 RBRH_RS09275 5c4bc77050d056c93d36083232238656 143 PANTHER PTHR33498:SF1 32 137 1.1E-16 T 23-04-2016 RBRH_RS09275 5c4bc77050d056c93d36083232238656 143 Pfam PF01610 Transposase 35 124 3.1E-14 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RBRH_RS11175 171c9f2fd1e70ce760ea84c5d0e8cb92 194 Gene3D G3DSA:3.40.30.10 9 193 8.0E-56 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11175 171c9f2fd1e70ce760ea84c5d0e8cb92 194 SUPERFAMILY SSF52833 35 194 2.73E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11175 171c9f2fd1e70ce760ea84c5d0e8cb92 194 PANTHER PTHR12151 35 194 1.8E-52 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC RBRH_RS11175 171c9f2fd1e70ce760ea84c5d0e8cb92 194 Pfam PF02630 SCO1/SenC 33 172 2.5E-37 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC RBRH_RS02240 cd8d1427d0987ab083617564d3c85cf2 148 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 147 32.819 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 RBRH_RS02240 cd8d1427d0987ab083617564d3c85cf2 148 PANTHER PTHR11241 16 147 5.4E-47 T 23-04-2016 RBRH_RS02240 cd8d1427d0987ab083617564d3c85cf2 148 TIGRFAM TIGR00576 dut: dUTP diphosphatase 12 147 2.9E-46 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 RBRH_RS02240 cd8d1427d0987ab083617564d3c85cf2 148 SUPERFAMILY SSF51283 7 147 3.01E-50 T 23-04-2016 IPR029054 dUTPase-like RBRH_RS02240 cd8d1427d0987ab083617564d3c85cf2 148 Pfam PF00692 dUTPase 15 146 1.5E-36 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RBRH_RS02240 cd8d1427d0987ab083617564d3c85cf2 148 Gene3D G3DSA:2.70.40.10 7 147 2.5E-51 T 23-04-2016 IPR029054 dUTPase-like RBRH_RS06665 e0f4e1885962a6b6cae18b8a4ad92ea3 311 SUPERFAMILY SSF50346 194 282 5.89E-10 T 23-04-2016 IPR011033 PRC-barrel-like RBRH_RS06665 e0f4e1885962a6b6cae18b8a4ad92ea3 311 SUPERFAMILY SSF50346 61 167 1.26E-7 T 23-04-2016 IPR011033 PRC-barrel-like RBRH_RS07500 b37721b73ee9d899a0daaa7e707d5bc4 443 Pfam PF04984 Phage tail sheath protein 88 437 5.9E-29 T 23-04-2016 IPR007067 Tail sheath protein RBRH_RS07500 b37721b73ee9d899a0daaa7e707d5bc4 443 PANTHER PTHR35861:SF1 229 437 1.2E-53 T 23-04-2016 RBRH_RS07500 b37721b73ee9d899a0daaa7e707d5bc4 443 PANTHER PTHR35861 229 437 1.2E-53 T 23-04-2016 RBRH_RS04800 49bff329fc9268f6f5c680b18940ebf1 120 PRINTS PR00332 Histidine triad family signature 7 23 1.45E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RBRH_RS04800 49bff329fc9268f6f5c680b18940ebf1 120 PRINTS PR00332 Histidine triad family signature 28 46 1.45E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RBRH_RS04800 49bff329fc9268f6f5c680b18940ebf1 120 PRINTS PR00332 Histidine triad family signature 100 110 1.45E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RBRH_RS04800 49bff329fc9268f6f5c680b18940ebf1 120 Pfam PF01230 HIT domain 14 112 1.7E-23 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RBRH_RS04800 49bff329fc9268f6f5c680b18940ebf1 120 Gene3D G3DSA:3.30.428.10 2 114 1.7E-37 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 RBRH_RS04800 49bff329fc9268f6f5c680b18940ebf1 120 PANTHER PTHR23089 1 114 8.6E-40 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RBRH_RS04800 49bff329fc9268f6f5c680b18940ebf1 120 SUPERFAMILY SSF54197 3 114 1.11E-36 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 PANTHER PTHR11349 1 135 4.7E-69 T 23-04-2016 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.353 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.1E-56 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.9E-39 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.9E-39 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.9E-39 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.9E-39 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.9E-39 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 23-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 Gene3D G3DSA:3.30.70.141 1 138 1.4E-59 T 23-04-2016 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 SMART SM00562 3 140 1.3E-83 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RBRH_RS05780 2ddea1f7a4eae0aa33ad369b0f6b0062 141 SUPERFAMILY SSF54919 1 139 2.36E-58 T 23-04-2016 RBRH_RS08240 5b4fba54d7ed081e57aa9737df1ba5c4 555 SUPERFAMILY SSF101967 436 473 4.58E-8 T 23-04-2016 RBRH_RS08240 5b4fba54d7ed081e57aa9737df1ba5c4 555 Gene3D G3DSA:3.30.1300.30 478 555 4.0E-25 T 23-04-2016 RBRH_RS08240 5b4fba54d7ed081e57aa9737df1ba5c4 555 SUPERFAMILY SSF54523 462 555 1.3E-18 T 23-04-2016 RBRH_RS08240 5b4fba54d7ed081e57aa9737df1ba5c4 555 Pfam PF03895 YadA-like C-terminal region 477 555 1.0E-19 T 23-04-2016 IPR005594 YadA-like, C-terminal RBRH_RS08240 5b4fba54d7ed081e57aa9737df1ba5c4 555 Gene3D G3DSA:2.150.10.10 439 473 2.0E-11 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal RBRH_RS07230 7f6971a0f0dd61d540a8e18574501772 403 SMART SM00729 56 279 0.0022 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS07230 7f6971a0f0dd61d540a8e18574501772 403 SUPERFAMILY SSF102114 43 265 8.89E-16 T 23-04-2016 RBRH_RS07230 7f6971a0f0dd61d540a8e18574501772 403 PANTHER PTHR21180:SF9 134 399 1.1E-102 T 23-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative RBRH_RS07230 7f6971a0f0dd61d540a8e18574501772 403 Pfam PF04055 Radical SAM superfamily 62 200 2.3E-7 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS07230 7f6971a0f0dd61d540a8e18574501772 403 PANTHER PTHR21180 134 399 1.1E-102 T 23-04-2016 RBRH_RS07230 7f6971a0f0dd61d540a8e18574501772 403 Gene3D G3DSA:3.80.30.20 64 288 6.5E-13 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RBRH_RS07230 7f6971a0f0dd61d540a8e18574501772 403 SUPERFAMILY SSF47781 294 373 3.63E-9 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RBRH_RS07230 7f6971a0f0dd61d540a8e18574501772 403 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 4 395 3.2E-163 T 23-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative RBRH_RS01675 c9310eaad8ef8023cb7ad401720d8651 279 SUPERFAMILY SSF53098 97 258 1.07E-40 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS01675 c9310eaad8ef8023cb7ad401720d8651 279 Pfam PF13683 Integrase core domain 187 252 4.1E-30 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RBRH_RS01675 c9310eaad8ef8023cb7ad401720d8651 279 Pfam PF13276 HTH-like domain 33 86 4.1E-12 T 23-04-2016 IPR025948 HTH-like domain RBRH_RS01675 c9310eaad8ef8023cb7ad401720d8651 279 Gene3D G3DSA:3.30.420.10 96 253 3.8E-42 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS01675 c9310eaad8ef8023cb7ad401720d8651 279 PANTHER PTHR32552 29 262 2.1E-85 T 23-04-2016 RBRH_RS01675 c9310eaad8ef8023cb7ad401720d8651 279 PANTHER PTHR32552:SF26 29 262 2.1E-85 T 23-04-2016 RBRH_RS04215 c9310eaad8ef8023cb7ad401720d8651 279 SUPERFAMILY SSF53098 97 258 1.07E-40 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS04215 c9310eaad8ef8023cb7ad401720d8651 279 Pfam PF13683 Integrase core domain 187 252 4.1E-30 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RBRH_RS04215 c9310eaad8ef8023cb7ad401720d8651 279 Pfam PF13276 HTH-like domain 33 86 4.1E-12 T 23-04-2016 IPR025948 HTH-like domain RBRH_RS04215 c9310eaad8ef8023cb7ad401720d8651 279 Gene3D G3DSA:3.30.420.10 96 253 3.8E-42 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS04215 c9310eaad8ef8023cb7ad401720d8651 279 PANTHER PTHR32552 29 262 2.1E-85 T 23-04-2016 RBRH_RS04215 c9310eaad8ef8023cb7ad401720d8651 279 PANTHER PTHR32552:SF26 29 262 2.1E-85 T 23-04-2016 RBRH_RS00770 c9310eaad8ef8023cb7ad401720d8651 279 SUPERFAMILY SSF53098 97 258 1.07E-40 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS00770 c9310eaad8ef8023cb7ad401720d8651 279 Pfam PF13683 Integrase core domain 187 252 4.1E-30 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RBRH_RS00770 c9310eaad8ef8023cb7ad401720d8651 279 Pfam PF13276 HTH-like domain 33 86 4.1E-12 T 23-04-2016 IPR025948 HTH-like domain RBRH_RS00770 c9310eaad8ef8023cb7ad401720d8651 279 Gene3D G3DSA:3.30.420.10 96 253 3.8E-42 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS00770 c9310eaad8ef8023cb7ad401720d8651 279 PANTHER PTHR32552 29 262 2.1E-85 T 23-04-2016 RBRH_RS00770 c9310eaad8ef8023cb7ad401720d8651 279 PANTHER PTHR32552:SF26 29 262 2.1E-85 T 23-04-2016 RBRH_RS04275 c9310eaad8ef8023cb7ad401720d8651 279 SUPERFAMILY SSF53098 97 258 1.07E-40 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS04275 c9310eaad8ef8023cb7ad401720d8651 279 Pfam PF13683 Integrase core domain 187 252 4.1E-30 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RBRH_RS04275 c9310eaad8ef8023cb7ad401720d8651 279 Pfam PF13276 HTH-like domain 33 86 4.1E-12 T 23-04-2016 IPR025948 HTH-like domain RBRH_RS04275 c9310eaad8ef8023cb7ad401720d8651 279 Gene3D G3DSA:3.30.420.10 96 253 3.8E-42 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS04275 c9310eaad8ef8023cb7ad401720d8651 279 PANTHER PTHR32552 29 262 2.1E-85 T 23-04-2016 RBRH_RS04275 c9310eaad8ef8023cb7ad401720d8651 279 PANTHER PTHR32552:SF26 29 262 2.1E-85 T 23-04-2016 RBRH_RS02030 4c3ed2679fcf50b78768c847a4f725a8 280 Pfam PF13369 Transglutaminase-like superfamily 42 196 1.6E-47 T 23-04-2016 IPR032698 Protein SirB1, N-terminal RBRH_RS02030 4c3ed2679fcf50b78768c847a4f725a8 280 PANTHER PTHR31350:SF1 33 278 4.1E-39 T 23-04-2016 RBRH_RS02030 4c3ed2679fcf50b78768c847a4f725a8 280 Gene3D G3DSA:1.25.40.10 188 263 6.6E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS02030 4c3ed2679fcf50b78768c847a4f725a8 280 SUPERFAMILY SSF48452 191 263 6.32E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS02030 4c3ed2679fcf50b78768c847a4f725a8 280 Pfam PF13371 Tetratricopeptide repeat 198 270 9.4E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS02030 4c3ed2679fcf50b78768c847a4f725a8 280 PANTHER PTHR31350 33 278 4.1E-39 T 23-04-2016 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 SUPERFAMILY SSF110921 444 546 1.7E-27 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 SMART SM00917 420 547 8.6E-24 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 546 3.1E-232 T 23-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 SUPERFAMILY SSF89000 386 435 4.32E-15 T 23-04-2016 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 Pfam PF08502 LeuA allosteric (dimerisation) domain 420 546 7.9E-21 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 PANTHER PTHR10277:SF28 1 555 2.0E-263 T 23-04-2016 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 Gene3D G3DSA:3.20.20.70 8 393 7.4E-144 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 Pfam PF00682 HMGL-like 31 309 6.2E-73 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 PANTHER PTHR10277 1 555 2.0E-263 T 23-04-2016 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 SUPERFAMILY SSF51569 20 328 1.23E-98 T 23-04-2016 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 548 53.132 T 23-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS08715 de67ff93eb6694d09f068178ecf8c48a 575 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 SUPERFAMILY SSF55681 116 423 1.58E-99 T 23-04-2016 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 PANTHER PTHR11778 1 428 2.1E-211 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 PRINTS PR00981 Seryl-tRNA synthetase signature 268 280 4.9E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 PRINTS PR00981 Seryl-tRNA synthetase signature 337 353 4.9E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 PRINTS PR00981 Seryl-tRNA synthetase signature 355 371 4.9E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 PRINTS PR00981 Seryl-tRNA synthetase signature 320 333 4.9E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 PRINTS PR00981 Seryl-tRNA synthetase signature 280 293 4.9E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 Gene3D G3DSA:3.30.930.10 105 423 1.4E-141 T 23-04-2016 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 425 39.879 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.0E-31 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 402 5.9E-35 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 PIRSF PIRSF001529 1 428 1.5E-178 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 Gene3D G3DSA:1.10.287.40 1 104 4.9E-29 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 SUPERFAMILY SSF46589 1 112 7.85E-31 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RBRH_RS02675 a138553f8ad8ba8210ad6fa72ffcb5d1 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 420 6.7E-162 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 Gene3D G3DSA:3.30.360.10 142 354 1.5E-74 T 23-04-2016 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 265 279 - T 23-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 371 3.9E-193 T 23-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 SUPERFAMILY SSF51735 1 146 3.0E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 Gene3D G3DSA:3.40.50.720 1 141 8.5E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 PANTHER PTHR10174:SF116 102 178 1.7E-143 T 23-04-2016 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 PANTHER PTHR10174:SF116 200 372 1.7E-143 T 23-04-2016 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 357 7.9E-55 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 SUPERFAMILY SSF55347 133 358 2.98E-77 T 23-04-2016 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 PANTHER PTHR10174 102 178 1.7E-143 T 23-04-2016 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 PANTHER PTHR10174 200 372 1.7E-143 T 23-04-2016 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 1.3E-25 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 SMART SM00859 2 121 2.6E-28 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 PIRSF PIRSF000148 1 373 1.8E-68 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS08790 f934cef4c866a78eae0b56b9f8c982fe 373 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 371 32.851 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS05275 0767a535ac8e471d786a1f988423bb16 117 PANTHER PTHR11803:SF17 11 114 2.2E-32 T 23-04-2016 RBRH_RS05275 0767a535ac8e471d786a1f988423bb16 117 SUPERFAMILY SSF55298 11 115 2.83E-28 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RBRH_RS05275 0767a535ac8e471d786a1f988423bb16 117 PANTHER PTHR11803 11 114 2.2E-32 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RBRH_RS05275 0767a535ac8e471d786a1f988423bb16 117 Gene3D G3DSA:3.30.1330.40 12 114 3.3E-25 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RBRH_RS05275 0767a535ac8e471d786a1f988423bb16 117 Pfam PF01042 Endoribonuclease L-PSP 13 114 5.9E-23 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 SUPERFAMILY SSF52172 1 120 2.11E-12 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 Gene3D G3DSA:1.10.10.10 151 215 7.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 PANTHER PTHR26402:SF474 1 213 3.8E-23 T 23-04-2016 RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 Gene3D G3DSA:3.40.50.2300 2 124 6.0E-10 T 23-04-2016 RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 ProSitePatterns PS00622 LuxR-type HTH domain signature. 174 201 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 SMART SM00421 157 214 2.1E-21 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 PANTHER PTHR26402 1 213 3.8E-23 T 23-04-2016 RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 SUPERFAMILY SSF46894 153 216 1.09E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 174 1.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 202 1.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 190 1.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS08890 ec5f045a3b3868433cea46b35633d908 284 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 212 6.8E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RBRH_RS02610 86f6227b7ba57e5b6fa41ede8de0fe09 776 SUPERFAMILY SSF69618 225 372 6.8E-22 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS02610 86f6227b7ba57e5b6fa41ede8de0fe09 776 Gene3D G3DSA:3.40.50.10090 143 170 1.1E-10 T 23-04-2016 RBRH_RS02610 86f6227b7ba57e5b6fa41ede8de0fe09 776 Gene3D G3DSA:3.40.50.10090 31 100 1.1E-10 T 23-04-2016 RBRH_RS02610 86f6227b7ba57e5b6fa41ede8de0fe09 776 SUPERFAMILY SSF69618 26 107 6.67E-18 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS02610 86f6227b7ba57e5b6fa41ede8de0fe09 776 SUPERFAMILY SSF69618 141 172 6.67E-18 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS02610 86f6227b7ba57e5b6fa41ede8de0fe09 776 PANTHER PTHR38043 406 769 1.3E-32 T 23-04-2016 RBRH_RS02610 86f6227b7ba57e5b6fa41ede8de0fe09 776 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 443 771 6.1E-53 T 23-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX RBRH_RS02610 86f6227b7ba57e5b6fa41ede8de0fe09 776 Gene3D G3DSA:3.40.50.10090 247 361 2.2E-15 T 23-04-2016 RBRH_RS02610 86f6227b7ba57e5b6fa41ede8de0fe09 776 Pfam PF02602 Uroporphyrinogen-III synthase HemD 225 361 6.3E-15 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS02610 86f6227b7ba57e5b6fa41ede8de0fe09 776 Pfam PF02602 Uroporphyrinogen-III synthase HemD 39 171 9.2E-12 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS07220 d9b0454895bb430468fe53391676ae36 357 PANTHER PTHR10314:SF17 37 357 8.1E-90 T 23-04-2016 RBRH_RS07220 d9b0454895bb430468fe53391676ae36 357 Gene3D G3DSA:3.40.50.1100 104 349 2.3E-70 T 23-04-2016 RBRH_RS07220 d9b0454895bb430468fe53391676ae36 357 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 337 9.8E-69 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RBRH_RS07220 d9b0454895bb430468fe53391676ae36 357 PANTHER PTHR10314 37 357 8.1E-90 T 23-04-2016 RBRH_RS07220 d9b0454895bb430468fe53391676ae36 357 SUPERFAMILY SSF53686 37 344 2.36E-82 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RBRH_RS06795 65b3c2af79b7a7d1e621d94f8d77e9fd 238 PANTHER PTHR24220 7 225 3.6E-95 T 23-04-2016 RBRH_RS06795 65b3c2af79b7a7d1e621d94f8d77e9fd 238 SMART SM00382 30 215 4.6E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS06795 65b3c2af79b7a7d1e621d94f8d77e9fd 238 Pfam PF00005 ABC transporter 23 166 2.4E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS06795 65b3c2af79b7a7d1e621d94f8d77e9fd 238 Gene3D G3DSA:3.40.50.300 4 229 1.8E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06795 65b3c2af79b7a7d1e621d94f8d77e9fd 238 PANTHER PTHR24220:SF568 7 225 3.6E-95 T 23-04-2016 RBRH_RS06795 65b3c2af79b7a7d1e621d94f8d77e9fd 238 SUPERFAMILY SSF52540 5 230 2.45E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06795 65b3c2af79b7a7d1e621d94f8d77e9fd 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 Gene3D G3DSA:3.40.50.170 89 284 1.8E-56 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 PIRSF PIRSF036480 4 289 2.9E-108 T 23-04-2016 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 SUPERFAMILY SSF53328 91 289 3.27E-61 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 PANTHER PTHR10520:SF7 4 282 7.0E-146 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 Pfam PF00551 Formyl transferase 91 269 7.6E-38 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 288 47.388 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 SUPERFAMILY SSF55021 6 87 1.58E-17 T 23-04-2016 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 288 4.8E-102 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 262 287 3.2E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 113 140 3.2E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 3.2E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 3.2E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 91 113 3.2E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 240 262 3.2E-53 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 PANTHER PTHR10520 4 282 7.0E-146 T 23-04-2016 RBRH_RS10965 0e4a2148a8d717574cb4cf78a09c13de 289 Gene3D G3DSA:3.30.70.260 3 85 2.3E-27 T 23-04-2016 RBRH_RS11470 75a0c040b55c566b3fa023e0860c33f0 250 SUPERFAMILY SSF110997 172 248 9.29E-19 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RBRH_RS11470 75a0c040b55c566b3fa023e0860c33f0 250 Gene3D G3DSA:3.30.70.1070 169 249 2.7E-26 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RBRH_RS11470 75a0c040b55c566b3fa023e0860c33f0 250 Pfam PF05036 Sporulation related domain 172 246 1.5E-17 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 RBRH_RS09850 d252fe57a702eba2e09c8d0961efc8af 340 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 7 338 7.3E-135 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 RBRH_RS09850 d252fe57a702eba2e09c8d0961efc8af 340 PANTHER PTHR10366 6 339 5.8E-152 T 23-04-2016 RBRH_RS09850 d252fe57a702eba2e09c8d0961efc8af 340 SUPERFAMILY SSF51735 4 339 1.57E-96 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09850 d252fe57a702eba2e09c8d0961efc8af 340 PANTHER PTHR10366:SF39 6 339 5.8E-152 T 23-04-2016 RBRH_RS09850 d252fe57a702eba2e09c8d0961efc8af 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 327 5.8E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09850 d252fe57a702eba2e09c8d0961efc8af 340 Gene3D G3DSA:3.90.25.10 184 235 3.5E-52 T 23-04-2016 RBRH_RS09850 d252fe57a702eba2e09c8d0961efc8af 340 Gene3D G3DSA:3.90.25.10 267 339 3.5E-52 T 23-04-2016 RBRH_RS09850 d252fe57a702eba2e09c8d0961efc8af 340 Gene3D G3DSA:3.40.50.720 2 183 9.4E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS11090 18c77e5485ba937bcdf372bb2bf7c38f 90 PANTHER PTHR24960 1 87 4.2E-27 T 23-04-2016 RBRH_RS11090 18c77e5485ba937bcdf372bb2bf7c38f 90 Pfam PF12838 4Fe-4S dicluster domain 9 57 2.8E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RBRH_RS11090 18c77e5485ba937bcdf372bb2bf7c38f 90 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS11090 18c77e5485ba937bcdf372bb2bf7c38f 90 PANTHER PTHR24960:SF38 1 87 4.2E-27 T 23-04-2016 RBRH_RS11090 18c77e5485ba937bcdf372bb2bf7c38f 90 SUPERFAMILY SSF54862 4 76 3.59E-20 T 23-04-2016 RBRH_RS11090 18c77e5485ba937bcdf372bb2bf7c38f 90 Gene3D G3DSA:3.30.70.20 4 75 9.1E-20 T 23-04-2016 RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 PANTHER PTHR30346 1 303 5.1E-99 T 23-04-2016 RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 Gene3D G3DSA:3.40.190.10 176 279 3.2E-34 T 23-04-2016 RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 PANTHER PTHR30346:SF15 1 303 5.1E-99 T 23-04-2016 RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 Pfam PF03466 LysR substrate binding domain 88 303 1.3E-47 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 Gene3D G3DSA:1.10.10.10 1 84 4.7E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 SUPERFAMILY SSF53850 88 305 2.26E-42 T 23-04-2016 RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 SUPERFAMILY SSF46785 1 84 3.39E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.0E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS01775 e9975aec11be8eac3d5a595af8633508 319 Gene3D G3DSA:3.40.190.10 90 175 4.1E-21 T 23-04-2016 RBRH_RS10465 1096a290a7a27fc1ff3c506142f220a2 259 SMART SM00563 72 187 1.9E-27 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RBRH_RS10465 1096a290a7a27fc1ff3c506142f220a2 259 Pfam PF01553 Acyltransferase 60 184 1.2E-20 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RBRH_RS10465 1096a290a7a27fc1ff3c506142f220a2 259 SUPERFAMILY SSF69593 8 236 1.31E-43 T 23-04-2016 RBRH_RS10465 1096a290a7a27fc1ff3c506142f220a2 259 Gene3D G3DSA:3.40.1130.10 62 231 2.7E-19 T 23-04-2016 RBRH_RS10465 1096a290a7a27fc1ff3c506142f220a2 259 PANTHER PTHR10434 1 236 5.3E-50 T 23-04-2016 RBRH_RS04090 cb1c374b73669360b6f5ff7728f615a4 109 SUPERFAMILY SSF47598 72 106 2.0E-6 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RBRH_RS04090 cb1c374b73669360b6f5ff7728f615a4 109 Pfam PF05534 HicB family 57 105 7.5E-16 T 23-04-2016 IPR008651 Uncharacterised protein family HicB RBRH_RS04090 cb1c374b73669360b6f5ff7728f615a4 109 SUPERFAMILY SSF143100 6 68 1.96E-10 T 23-04-2016 RBRH_RS10435 451c9d4e86e0cb0783d2cb3286f406f7 264 PANTHER PTHR12192:SF9 60 239 1.0E-49 T 23-04-2016 RBRH_RS10435 451c9d4e86e0cb0783d2cb3286f406f7 264 Pfam PF04752 ChaC-like protein 76 241 2.1E-37 T 23-04-2016 IPR006840 ChaC-like protein RBRH_RS10435 451c9d4e86e0cb0783d2cb3286f406f7 264 Gene3D G3DSA:3.10.490.10 73 237 4.7E-25 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RBRH_RS10435 451c9d4e86e0cb0783d2cb3286f406f7 264 PANTHER PTHR12192 60 239 1.0E-49 T 23-04-2016 IPR006840 ChaC-like protein RBRH_RS10435 451c9d4e86e0cb0783d2cb3286f406f7 264 SUPERFAMILY SSF110857 76 192 5.1E-10 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 246 255 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 Pfam PF00158 Sigma-54 interaction domain 35 200 4.1E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 120 135 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 SUPERFAMILY SSF46689 246 337 2.56E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 Gene3D G3DSA:1.10.10.60 294 334 2.0E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 Gene3D G3DSA:1.10.8.60 206 280 1.3E-21 T 23-04-2016 RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 Gene3D G3DSA:3.40.50.300 34 205 1.4E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 SMART SM00382 54 208 3.1E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 SUPERFAMILY SSF52540 34 267 8.87E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 Pfam PF02954 Bacterial regulatory protein, Fis family 297 336 1.3E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS09620 843ced14fd02b417474fd12e4dcb861f 351 PANTHER PTHR32071 30 350 4.4E-142 T 23-04-2016 RBRH_RS08385 1c278df302f65ec74dfc319467e7d5e7 83 PANTHER PTHR37304:SF1 6 64 3.3E-18 T 23-04-2016 RBRH_RS08385 1c278df302f65ec74dfc319467e7d5e7 83 Pfam PF04070 Domain of unknown function (DUF378) 13 67 2.0E-24 T 23-04-2016 IPR007211 Protein of unknown function DUF378 RBRH_RS08385 1c278df302f65ec74dfc319467e7d5e7 83 PANTHER PTHR37304 6 64 3.3E-18 T 23-04-2016 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 PANTHER PTHR11807 24 453 6.1E-64 T 23-04-2016 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 SUPERFAMILY SSF82829 269 343 1.1E-17 T 23-04-2016 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 17 332 22.552 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 Pfam PF01171 PP-loop family 30 208 4.3E-51 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 SUPERFAMILY SSF52402 27 242 1.85E-51 T 23-04-2016 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 Pfam PF09179 TilS substrate binding domain 273 340 1.4E-14 T 23-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 PANTHER PTHR11807:SF2 24 453 6.1E-64 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 SMART SM00977 400 469 6.3E-23 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 400 444 2.0E-11 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 30 212 6.5E-50 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 Gene3D G3DSA:3.40.50.620 25 141 3.9E-15 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 SUPERFAMILY SSF56037 354 472 6.54E-25 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RBRH_RS07980 5315cfbca6cfa873c1242004ac325e31 476 Pfam PF11734 TilS substrate C-terminal domain 400 469 2.7E-22 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 PANTHER PTHR11556 12 339 3.5E-151 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 11 339 45.461 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 12 199 1.4E-60 T 23-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 SUPERFAMILY SSF56655 7 337 4.51E-112 T 23-04-2016 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 Gene3D G3DSA:3.30.540.10 11 200 2.1E-73 T 23-04-2016 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 154 177 7.6E-68 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 73 99 7.6E-68 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 211 238 7.6E-68 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 36 63 7.6E-68 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 313 338 7.6E-68 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 185 208 7.6E-68 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 PIRSF PIRSF500210 7 340 4.2E-125 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 PIRSF PIRSF000904 7 340 4.1E-122 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RBRH_RS02810 140b758faea2a3b06a22bded815c11d6 340 Gene3D G3DSA:3.40.190.80 203 338 8.3E-56 T 23-04-2016 RBRH_RS02945 8edc4a2c6db0afe9548a2a8248e51a6e 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 1.8E-148 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RBRH_RS02945 8edc4a2c6db0afe9548a2a8248e51a6e 360 PIRSF PIRSF000525 1 360 4.2E-148 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RBRH_RS02945 8edc4a2c6db0afe9548a2a8248e51a6e 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RBRH_RS02945 8edc4a2c6db0afe9548a2a8248e51a6e 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 359 48.465 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RBRH_RS02945 8edc4a2c6db0afe9548a2a8248e51a6e 360 Pfam PF00266 Aminotransferase class-V 4 347 5.9E-48 T 23-04-2016 IPR000192 Aminotransferase class V domain RBRH_RS02945 8edc4a2c6db0afe9548a2a8248e51a6e 360 SUPERFAMILY SSF53383 2 357 3.05E-111 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS02945 8edc4a2c6db0afe9548a2a8248e51a6e 360 PANTHER PTHR21152 2 358 1.2E-175 T 23-04-2016 RBRH_RS02945 8edc4a2c6db0afe9548a2a8248e51a6e 360 PANTHER PTHR21152:SF1 2 358 1.2E-175 T 23-04-2016 RBRH_RS02945 8edc4a2c6db0afe9548a2a8248e51a6e 360 Gene3D G3DSA:3.90.1150.10 258 358 3.7E-42 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS02945 8edc4a2c6db0afe9548a2a8248e51a6e 360 Gene3D G3DSA:3.40.640.10 16 257 2.3E-104 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS01040 5ec8758b4880dcb23ccd6fb3d1ff8b31 396 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 85 339 1.4E-31 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RBRH_RS01040 5ec8758b4880dcb23ccd6fb3d1ff8b31 396 PANTHER PTHR30160:SF11 9 370 2.8E-43 T 23-04-2016 RBRH_RS01040 5ec8758b4880dcb23ccd6fb3d1ff8b31 396 SUPERFAMILY SSF53756 9 362 3.14E-79 T 23-04-2016 RBRH_RS01040 5ec8758b4880dcb23ccd6fb3d1ff8b31 396 Gene3D G3DSA:3.40.50.2000 9 166 5.0E-29 T 23-04-2016 RBRH_RS01040 5ec8758b4880dcb23ccd6fb3d1ff8b31 396 Gene3D G3DSA:3.40.50.2000 197 361 4.5E-53 T 23-04-2016 RBRH_RS01040 5ec8758b4880dcb23ccd6fb3d1ff8b31 396 PANTHER PTHR30160 9 370 2.8E-43 T 23-04-2016 RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 PANTHER PTHR32479:SF2 14 404 5.3E-113 T 23-04-2016 RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 SUPERFAMILY SSF46548 16 102 1.31E-20 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 PANTHER PTHR32479 14 404 5.3E-113 T 23-04-2016 RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 Pfam PF12838 4Fe-4S dicluster domain 24 89 3.5E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 Pfam PF02754 Cysteine-rich domain 171 255 6.9E-12 T 23-04-2016 IPR004017 Cysteine-rich domain RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 Pfam PF02754 Cysteine-rich domain 304 387 4.0E-13 T 23-04-2016 IPR004017 Cysteine-rich domain RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 PIRSF PIRSF000139 7 408 1.7E-111 T 23-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 SUPERFAMILY SSF54862 16 213 7.95E-7 T 23-04-2016 RBRH_RS01795 2b8cabc45586cc8d6e38d9c873495e31 408 Gene3D G3DSA:1.10.1060.10 17 105 1.2E-21 T 23-04-2016 RBRH_RS03770 de8fa6e3bd2c29bb3ff7cf8834881a45 236 SMART SM00382 27 208 1.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS03770 de8fa6e3bd2c29bb3ff7cf8834881a45 236 PANTHER PTHR24220:SF568 4 234 9.9E-70 T 23-04-2016 RBRH_RS03770 de8fa6e3bd2c29bb3ff7cf8834881a45 236 Gene3D G3DSA:3.40.50.300 4 228 1.5E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03770 de8fa6e3bd2c29bb3ff7cf8834881a45 236 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS03770 de8fa6e3bd2c29bb3ff7cf8834881a45 236 Pfam PF00005 ABC transporter 19 159 3.9E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS03770 de8fa6e3bd2c29bb3ff7cf8834881a45 236 SUPERFAMILY SSF52540 3 227 1.57E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03770 de8fa6e3bd2c29bb3ff7cf8834881a45 236 PANTHER PTHR24220 4 234 9.9E-70 T 23-04-2016 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 SUPERFAMILY SSF51735 163 452 1.47E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 749 1.3E-92 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 PIRSF PIRSF036684 1 756 0.0 T 23-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 Gene3D G3DSA:3.40.50.10380 7 160 2.6E-51 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 Gene3D G3DSA:3.40.50.10750 568 725 4.4E-48 T 23-04-2016 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 1.0E-23 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 SMART SM00919 163 400 2.3E-139 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 SUPERFAMILY SSF53223 10 161 8.63E-52 T 23-04-2016 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 PANTHER PTHR23406 34 354 2.5E-162 T 23-04-2016 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 PANTHER PTHR23406 372 420 2.5E-162 T 23-04-2016 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 PRINTS PR00072 Malic enzyme signature 80 102 6.1E-5 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 PRINTS PR00072 Malic enzyme signature 159 175 6.1E-5 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 PRINTS PR00072 Malic enzyme signature 190 206 6.1E-5 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 1.2E-26 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 SMART SM01274 18 151 1.8E-78 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 SUPERFAMILY SSF53659 429 753 3.66E-85 T 23-04-2016 RBRH_RS01140 ecb88f90d1204a1bc3f43ae2cd8c982d 756 Gene3D G3DSA:3.40.50.720 161 448 9.6E-90 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 Pfam PF11741 AMIN domain 50 153 8.4E-25 T 23-04-2016 IPR021731 AMIN domain RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 PANTHER PTHR30404 276 514 3.0E-98 T 23-04-2016 RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 PANTHER PTHR30404 50 195 3.0E-98 T 23-04-2016 RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 PANTHER PTHR30404:SF0 276 514 3.0E-98 T 23-04-2016 RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 PANTHER PTHR30404:SF0 50 195 3.0E-98 T 23-04-2016 RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 SUPERFAMILY SSF53187 290 385 5.02E-55 T 23-04-2016 RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 SUPERFAMILY SSF53187 433 509 5.02E-55 T 23-04-2016 RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 SMART SM00646 351 506 1.1E-63 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 291 506 1.3E-47 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 Gene3D G3DSA:3.40.630.40 290 386 1.9E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RBRH_RS01945 9022189463012e3390ba80699ba5ca2d 521 Gene3D G3DSA:3.40.630.40 434 509 1.9E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RBRH_RS01915 1eca2dad176e67954bab862ef8e30340 232 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 8 214 1.4E-39 T 23-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RBRH_RS01915 1eca2dad176e67954bab862ef8e30340 232 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 200 3.4E-37 T 23-04-2016 RBRH_RS01915 1eca2dad176e67954bab862ef8e30340 232 PANTHER PTHR10000:SF10 7 228 2.7E-52 T 23-04-2016 RBRH_RS01915 1eca2dad176e67954bab862ef8e30340 232 Gene3D G3DSA:3.40.50.1000 86 229 4.7E-49 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS01915 1eca2dad176e67954bab862ef8e30340 232 Gene3D G3DSA:1.20.1440.100 20 85 9.2E-34 T 23-04-2016 RBRH_RS01915 1eca2dad176e67954bab862ef8e30340 232 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 8 202 8.1E-23 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RBRH_RS01915 1eca2dad176e67954bab862ef8e30340 232 PANTHER PTHR10000 7 228 2.7E-52 T 23-04-2016 RBRH_RS01915 1eca2dad176e67954bab862ef8e30340 232 SUPERFAMILY SSF56784 6 218 1.9E-32 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 Gene3D G3DSA:3.50.50.60 4 118 1.0E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.5E-119 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 9.9E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 9.9E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 9.9E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 9.9E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 9.9E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 9.9E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 9.9E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 9.9E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 9.9E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 SUPERFAMILY SSF51905 1 313 9.42E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PANTHER PTHR22912 1 316 1.2E-157 T 23-04-2016 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.0E-39 T 23-04-2016 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.0E-39 T 23-04-2016 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.0E-39 T 23-04-2016 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.0E-39 T 23-04-2016 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.0E-39 T 23-04-2016 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 7.3E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 Gene3D G3DSA:3.50.50.60 119 233 2.7E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 PANTHER PTHR22912:SF48 1 316 1.2E-157 T 23-04-2016 RBRH_RS02655 d93c294def835bb1665044fc0bc08677 331 Gene3D G3DSA:3.50.50.60 234 315 1.3E-8 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 PIRSF PIRSF004749 1 168 3.3E-48 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 PANTHER PTHR10458 1 165 1.7E-77 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 PANTHER PTHR10458:SF4 1 165 1.7E-77 T 23-04-2016 RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 SUPERFAMILY SSF56420 1 166 2.88E-57 T 23-04-2016 IPR023635 Peptide deformylase RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 Pfam PF01327 Polypeptide deformylase 3 157 2.5E-46 T 23-04-2016 IPR023635 Peptide deformylase RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 Gene3D G3DSA:3.90.45.10 4 165 7.8E-53 T 23-04-2016 IPR023635 Peptide deformylase RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 Hamap MF_00163 Peptide deformylase [def]. 1 166 26.809 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 158 7.6E-36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 PRINTS PR01576 Peptide deformylase signature 97 108 1.56E-28 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 PRINTS PR01576 Peptide deformylase signature 33 62 1.56E-28 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 PRINTS PR01576 Peptide deformylase signature 109 127 1.56E-28 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS06415 00345500382bd3a21862e4f619320ed1 177 PRINTS PR01576 Peptide deformylase signature 128 157 1.56E-28 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RBRH_RS08300 423377edf2b5439b821e95934cb0b856 407 Pfam PF00266 Aminotransferase class-V 10 372 1.5E-88 T 23-04-2016 IPR000192 Aminotransferase class V domain RBRH_RS08300 423377edf2b5439b821e95934cb0b856 407 PANTHER PTHR11601 9 407 2.3E-236 T 23-04-2016 RBRH_RS08300 423377edf2b5439b821e95934cb0b856 407 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 200 219 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RBRH_RS08300 423377edf2b5439b821e95934cb0b856 407 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 7 407 1.6E-226 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RBRH_RS08300 423377edf2b5439b821e95934cb0b856 407 Gene3D G3DSA:3.40.640.10 22 257 2.9E-101 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS08300 423377edf2b5439b821e95934cb0b856 407 SUPERFAMILY SSF53383 10 394 1.48E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS08300 423377edf2b5439b821e95934cb0b856 407 PIRSF PIRSF005572 7 387 2.3E-133 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RBRH_RS08300 423377edf2b5439b821e95934cb0b856 407 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 6 398 54.784 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RBRH_RS08300 423377edf2b5439b821e95934cb0b856 407 Gene3D G3DSA:3.90.1150.10 258 377 9.9E-50 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS08300 423377edf2b5439b821e95934cb0b856 407 PANTHER PTHR11601:SF34 9 407 2.3E-236 T 23-04-2016 RBRH_RS01960 9369624a7c277c0f53b726e4cad0f5d5 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 70 153 4.9E-26 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RBRH_RS01960 9369624a7c277c0f53b726e4cad0f5d5 163 SUPERFAMILY SSF46767 68 153 2.09E-25 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RBRH_RS01960 9369624a7c277c0f53b726e4cad0f5d5 163 Gene3D G3DSA:1.10.10.10 68 158 4.4E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS01960 9369624a7c277c0f53b726e4cad0f5d5 163 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 117 123 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RBRH_RS01960 9369624a7c277c0f53b726e4cad0f5d5 163 PANTHER PTHR10815:SF5 1 161 2.7E-42 T 23-04-2016 RBRH_RS01960 9369624a7c277c0f53b726e4cad0f5d5 163 PANTHER PTHR10815 1 161 2.7E-42 T 23-04-2016 RBRH_RS01960 9369624a7c277c0f53b726e4cad0f5d5 163 SUPERFAMILY SSF53155 2 74 2.75E-13 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RBRH_RS01960 9369624a7c277c0f53b726e4cad0f5d5 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 69 151 1.1E-23 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RBRH_RS09070 880882d06c6d9827a231e7341de5b5d9 200 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 168 35.645 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RBRH_RS09070 880882d06c6d9827a231e7341de5b5d9 200 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 161 1.9E-44 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RBRH_RS09070 880882d06c6d9827a231e7341de5b5d9 200 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 159 4.2E-42 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RBRH_RS09070 880882d06c6d9827a231e7341de5b5d9 200 PANTHER PTHR10884 25 178 6.5E-75 T 23-04-2016 RBRH_RS09070 880882d06c6d9827a231e7341de5b5d9 200 SUPERFAMILY SSF143243 10 181 1.83E-56 T 23-04-2016 RBRH_RS09070 880882d06c6d9827a231e7341de5b5d9 200 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 148 5.0E-27 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RBRH_RS09070 880882d06c6d9827a231e7341de5b5d9 200 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 23-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 RBRH_RS06385 a4076b2df41856d2786acae2e1c9a1b6 124 PANTHER PTHR30041 7 124 4.7E-34 T 23-04-2016 RBRH_RS06385 a4076b2df41856d2786acae2e1c9a1b6 124 SUPERFAMILY SSF52833 11 124 3.36E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS06385 a4076b2df41856d2786acae2e1c9a1b6 124 PANTHER PTHR30041:SF3 7 124 4.7E-34 T 23-04-2016 RBRH_RS06385 a4076b2df41856d2786acae2e1c9a1b6 124 Gene3D G3DSA:3.40.30.10 11 124 7.0E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS06385 a4076b2df41856d2786acae2e1c9a1b6 124 Pfam PF03960 ArsC family 14 122 4.4E-14 T 23-04-2016 IPR006660 Arsenate reductase-like RBRH_RS06385 a4076b2df41856d2786acae2e1c9a1b6 124 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 11 122 3.5E-31 T 23-04-2016 IPR006504 Transcriptional regulator Spx/MgsR RBRH_RS07595 be5c2f986ffb27d5f7b0bee4741dc4ce 301 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 32 290 1.8E-98 T 23-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RBRH_RS07595 be5c2f986ffb27d5f7b0bee4741dc4ce 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 290 2.1E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS07595 be5c2f986ffb27d5f7b0bee4741dc4ce 301 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 33 291 1.5E-125 T 23-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 RBRH_RS07595 be5c2f986ffb27d5f7b0bee4741dc4ce 301 PANTHER PTHR30406 2 298 2.5E-161 T 23-04-2016 RBRH_RS07595 be5c2f986ffb27d5f7b0bee4741dc4ce 301 SUPERFAMILY SSF161098 31 283 9.29E-56 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS07595 be5c2f986ffb27d5f7b0bee4741dc4ce 301 PANTHER PTHR30406:SF1 2 298 2.5E-161 T 23-04-2016 RBRH_RS07595 be5c2f986ffb27d5f7b0bee4741dc4ce 301 Gene3D G3DSA:1.10.3720.10 35 291 1.5E-50 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS04780 43e791fcd0f1cbcb18c59a49a508f1dd 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 48.727 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RBRH_RS04780 43e791fcd0f1cbcb18c59a49a508f1dd 257 PANTHER PTHR21235:SF2 5 257 1.3E-126 T 23-04-2016 RBRH_RS04780 43e791fcd0f1cbcb18c59a49a508f1dd 257 SUPERFAMILY SSF51366 4 256 1.1E-81 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RBRH_RS04780 43e791fcd0f1cbcb18c59a49a508f1dd 257 Gene3D G3DSA:3.20.20.70 5 256 3.2E-107 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS04780 43e791fcd0f1cbcb18c59a49a508f1dd 257 Pfam PF00977 Histidine biosynthesis protein 6 240 2.1E-90 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RBRH_RS04780 43e791fcd0f1cbcb18c59a49a508f1dd 257 PANTHER PTHR21235 5 257 1.3E-126 T 23-04-2016 RBRH_RS04780 43e791fcd0f1cbcb18c59a49a508f1dd 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 5.8E-115 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RBRH_RS12685 0a7400f5161d4c9af34f36d26aded4a6 107 PANTHER PTHR24095 1 93 2.5E-22 T 23-04-2016 RBRH_RS12685 0a7400f5161d4c9af34f36d26aded4a6 107 PANTHER PTHR24095:SF182 1 93 2.5E-22 T 23-04-2016 RBRH_RS12685 0a7400f5161d4c9af34f36d26aded4a6 107 SUPERFAMILY SSF56801 1 98 3.01E-8 T 23-04-2016 RBRH_RS12685 0a7400f5161d4c9af34f36d26aded4a6 107 Gene3D G3DSA:3.40.50.980 1 75 1.0E-5 T 23-04-2016 RBRH_RS08930 966011129b0eeb808b211b72475fd521 259 SUPERFAMILY SSF52096 3 259 3.95E-74 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS08930 966011129b0eeb808b211b72475fd521 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 1.9E-56 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RBRH_RS08930 966011129b0eeb808b211b72475fd521 259 PANTHER PTHR11941 4 258 3.3E-74 T 23-04-2016 RBRH_RS08930 966011129b0eeb808b211b72475fd521 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RBRH_RS08930 966011129b0eeb808b211b72475fd521 259 Gene3D G3DSA:3.90.226.10 4 259 1.5E-73 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS04720 9b28c2c1c907eeb913b11e9d5b8b9c8f 212 PIRSF PIRSF004649 1 212 2.9E-50 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RBRH_RS04720 9b28c2c1c907eeb913b11e9d5b8b9c8f 212 Gene3D G3DSA:1.10.10.640 76 116 1.5E-33 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RBRH_RS04720 9b28c2c1c907eeb913b11e9d5b8b9c8f 212 Gene3D G3DSA:1.10.10.640 174 208 1.5E-33 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RBRH_RS04720 9b28c2c1c907eeb913b11e9d5b8b9c8f 212 Pfam PF05494 MlaC protein 38 199 6.8E-57 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RBRH_RS04720 9b28c2c1c907eeb913b11e9d5b8b9c8f 212 PANTHER PTHR36573 1 212 1.5E-39 T 23-04-2016 RBRH_RS04720 9b28c2c1c907eeb913b11e9d5b8b9c8f 212 Gene3D G3DSA:3.10.450.50 119 173 8.0E-35 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS04720 9b28c2c1c907eeb913b11e9d5b8b9c8f 212 Gene3D G3DSA:3.10.450.50 31 75 8.0E-35 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.283 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 SMART SM01383 42 118 2.4E-41 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 Gene3D G3DSA:2.30.30.30 118 195 1.8E-32 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 PANTHER PTHR13691:SF5 1 275 5.2E-136 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 9.0E-56 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 SMART SM01382 124 252 1.7E-88 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 PIRSF PIRSF002158 7 275 3.1E-98 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 SUPERFAMILY SSF50104 127 272 2.59E-60 T 23-04-2016 IPR008991 Translation protein SH3-like domain RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 116 1.1E-31 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 SUPERFAMILY SSF50249 3 124 5.14E-47 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 PANTHER PTHR13691 1 275 5.2E-136 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 1.4E-128 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 Gene3D G3DSA:2.40.50.140 1 114 1.3E-48 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04410 c89636f4fa39976dc4f78a43a72b877f 275 Gene3D G3DSA:4.10.950.10 196 274 2.6E-34 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 RBRH_RS09015 af6c5db7bd16dbcf24f27d89513271a4 490 Pfam PF00361 Proton-conducting membrane transporter 125 426 8.7E-71 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RBRH_RS09015 af6c5db7bd16dbcf24f27d89513271a4 490 PANTHER PTHR22773 1 490 4.1E-157 T 23-04-2016 RBRH_RS09015 af6c5db7bd16dbcf24f27d89513271a4 490 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 4.7E-7 T 23-04-2016 RBRH_RS09015 af6c5db7bd16dbcf24f27d89513271a4 490 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 215 236 4.7E-7 T 23-04-2016 RBRH_RS09015 af6c5db7bd16dbcf24f27d89513271a4 490 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 72 97 4.7E-7 T 23-04-2016 RBRH_RS09015 af6c5db7bd16dbcf24f27d89513271a4 490 PANTHER PTHR22773:SF41 1 490 4.1E-157 T 23-04-2016 RBRH_RS09015 af6c5db7bd16dbcf24f27d89513271a4 490 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 7 476 6.3E-131 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RBRH_RS09015 af6c5db7bd16dbcf24f27d89513271a4 490 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 477 18.015 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RBRH_RS11515 c7445482f89b4888709dfa5df1ee0376 267 Pfam PF00484 Carbonic anhydrase 48 200 4.3E-47 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RBRH_RS11515 c7445482f89b4888709dfa5df1ee0376 267 SMART SM00947 41 204 5.2E-66 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RBRH_RS11515 c7445482f89b4888709dfa5df1ee0376 267 PANTHER PTHR11002:SF20 15 219 1.9E-103 T 23-04-2016 RBRH_RS11515 c7445482f89b4888709dfa5df1ee0376 267 SUPERFAMILY SSF53056 9 209 7.98E-69 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RBRH_RS11515 c7445482f89b4888709dfa5df1ee0376 267 PANTHER PTHR11002 15 219 1.9E-103 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RBRH_RS11515 c7445482f89b4888709dfa5df1ee0376 267 Gene3D G3DSA:3.40.1050.10 3 212 5.3E-71 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RBRH_RS11515 c7445482f89b4888709dfa5df1ee0376 267 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 53 60 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RBRH_RS00930 5d591a69f3c92266fcbb34fbd4d04b98 317 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 20 276 1.0E-53 T 23-04-2016 IPR000150 Cof protein GO:0016787 RBRH_RS00930 5d591a69f3c92266fcbb34fbd4d04b98 317 Pfam PF08282 haloacid dehalogenase-like hydrolase 21 277 8.7E-58 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS00930 5d591a69f3c92266fcbb34fbd4d04b98 317 Gene3D G3DSA:3.40.50.1000 15 88 1.4E-51 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS00930 5d591a69f3c92266fcbb34fbd4d04b98 317 Gene3D G3DSA:3.40.50.1000 194 281 1.4E-51 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS00930 5d591a69f3c92266fcbb34fbd4d04b98 317 PANTHER PTHR10000 17 283 8.8E-88 T 23-04-2016 RBRH_RS00930 5d591a69f3c92266fcbb34fbd4d04b98 317 ProSitePatterns PS01229 Hypothetical cof family signature 2. 229 251 - T 23-04-2016 RBRH_RS00930 5d591a69f3c92266fcbb34fbd4d04b98 317 SUPERFAMILY SSF56784 15 281 8.77E-66 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS00930 5d591a69f3c92266fcbb34fbd4d04b98 317 PANTHER PTHR10000:SF20 17 283 8.8E-88 T 23-04-2016 RBRH_RS00930 5d591a69f3c92266fcbb34fbd4d04b98 317 Gene3D G3DSA:3.30.1240.10 99 193 2.4E-16 T 23-04-2016 RBRH_RS00930 5d591a69f3c92266fcbb34fbd4d04b98 317 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 248 3.8E-27 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RBRH_RS03895 03a11a9d4045f891a1b69dda6ff188dc 127 SUPERFAMILY SSF47598 90 125 3.02E-6 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RBRH_RS03895 03a11a9d4045f891a1b69dda6ff188dc 127 PANTHER PTHR34873 1 127 8.2E-19 T 23-04-2016 RBRH_RS03895 03a11a9d4045f891a1b69dda6ff188dc 127 Gene3D G3DSA:1.10.1220.10 90 124 1.2E-5 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RBRH_RS03895 03a11a9d4045f891a1b69dda6ff188dc 127 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 123 1.9E-40 T 23-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system RBRH_RS03895 03a11a9d4045f891a1b69dda6ff188dc 127 SUPERFAMILY SSF143100 3 62 1.03E-9 T 23-04-2016 RBRH_RS03895 03a11a9d4045f891a1b69dda6ff188dc 127 PANTHER PTHR34873:SF2 1 127 8.2E-19 T 23-04-2016 RBRH_RS08295 3ca28aed1deb0cfe2b1c1afc613046c9 141 SUPERFAMILY SSF82649 1 126 1.02E-47 T 23-04-2016 RBRH_RS08295 3ca28aed1deb0cfe2b1c1afc613046c9 141 PANTHER PTHR10093:SF3 1 125 1.2E-94 T 23-04-2016 RBRH_RS08295 3ca28aed1deb0cfe2b1c1afc613046c9 141 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 3.5E-68 T 23-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 RBRH_RS08295 3ca28aed1deb0cfe2b1c1afc613046c9 141 Pfam PF01592 NifU-like N terminal domain 2 125 3.1E-55 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 RBRH_RS08295 3ca28aed1deb0cfe2b1c1afc613046c9 141 PANTHER PTHR10093 1 125 1.2E-94 T 23-04-2016 RBRH_RS08295 3ca28aed1deb0cfe2b1c1afc613046c9 141 Gene3D G3DSA:3.90.1010.10 2 125 4.4E-55 T 23-04-2016 RBRH_RS06960 484175cc7ff0d747ed358a6f9aa9bf85 394 SUPERFAMILY SSF50182 190 255 8.5E-14 T 23-04-2016 IPR010920 LSM domain RBRH_RS06960 484175cc7ff0d747ed358a6f9aa9bf85 394 Gene3D G3DSA:2.30.30.60 205 254 6.6E-7 T 23-04-2016 RBRH_RS06960 484175cc7ff0d747ed358a6f9aa9bf85 394 Pfam PF00924 Mechanosensitive ion channel 151 345 5.5E-26 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RBRH_RS06960 484175cc7ff0d747ed358a6f9aa9bf85 394 PANTHER PTHR30566 43 367 5.0E-92 T 23-04-2016 RBRH_RS06960 484175cc7ff0d747ed358a6f9aa9bf85 394 PANTHER PTHR30566:SF10 43 367 5.0E-92 T 23-04-2016 RBRH_RS05595 23f68f99e3d01d8d64f96aab9a050ee8 580 Pfam PF00733 Asparagine synthase 231 575 1.7E-14 T 23-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 RBRH_RS05595 23f68f99e3d01d8d64f96aab9a050ee8 580 Gene3D G3DSA:3.60.20.10 76 198 2.2E-9 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS05595 23f68f99e3d01d8d64f96aab9a050ee8 580 Gene3D G3DSA:3.40.50.620 199 359 8.9E-21 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS05595 23f68f99e3d01d8d64f96aab9a050ee8 580 Gene3D G3DSA:3.40.50.620 427 570 8.9E-21 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS05595 23f68f99e3d01d8d64f96aab9a050ee8 580 SUPERFAMILY SSF56235 81 198 2.12E-7 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS05595 23f68f99e3d01d8d64f96aab9a050ee8 580 SUPERFAMILY SSF52402 197 353 4.19E-17 T 23-04-2016 RBRH_RS05595 23f68f99e3d01d8d64f96aab9a050ee8 580 SUPERFAMILY SSF52402 453 548 4.19E-17 T 23-04-2016 RBRH_RS01800 8f59928251d13c0dff55daad410d430a 360 SUPERFAMILY SSF56176 2 171 4.09E-34 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS01800 8f59928251d13c0dff55daad410d430a 360 PANTHER PTHR11748 1 356 2.2E-72 T 23-04-2016 RBRH_RS01800 8f59928251d13c0dff55daad410d430a 360 SUPERFAMILY SSF55103 182 359 3.76E-14 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RBRH_RS01800 8f59928251d13c0dff55daad410d430a 360 PANTHER PTHR11748:SF1 1 356 2.2E-72 T 23-04-2016 RBRH_RS01800 8f59928251d13c0dff55daad410d430a 360 Pfam PF01565 FAD binding domain 7 133 1.1E-22 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RBRH_RS01800 8f59928251d13c0dff55daad410d430a 360 Gene3D G3DSA:3.30.465.10 50 171 1.6E-21 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RBRH_RS04100 c58bc9af553e461afc93e8f38d9ea551 376 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 11 84 3.1E-16 T 23-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 RBRH_RS04100 c58bc9af553e461afc93e8f38d9ea551 376 SUPERFAMILY SSF47413 11 89 7.32E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS04100 c58bc9af553e461afc93e8f38d9ea551 376 Gene3D G3DSA:1.10.260.40 8 87 8.2E-27 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS04100 c58bc9af553e461afc93e8f38d9ea551 376 Pfam PF01381 Helix-turn-helix 16 69 3.4E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RBRH_RS04100 c58bc9af553e461afc93e8f38d9ea551 376 SMART SM00530 15 70 1.1E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RBRH_RS04100 c58bc9af553e461afc93e8f38d9ea551 376 PANTHER PTHR36924 3 108 6.1E-17 T 23-04-2016 RBRH_RS06920 7821118b001e49b50a04b2272c788923 423 PANTHER PTHR30510 1 420 8.5E-160 T 23-04-2016 RBRH_RS06920 7821118b001e49b50a04b2272c788923 423 Pfam PF04285 Protein of unknown function (DUF444) 4 420 6.9E-180 T 23-04-2016 IPR006698 Uncharacterised protein family UPF0229 RBRH_RS06920 7821118b001e49b50a04b2272c788923 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 37.983 T 23-04-2016 IPR006698 Uncharacterised protein family UPF0229 RBRH_RS06920 7821118b001e49b50a04b2272c788923 423 SUPERFAMILY SSF53300 253 350 3.34E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A RBRH_RS06230 b8f56a8f2092fd6ef972f301073df693 519 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 499 1.3E-163 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RBRH_RS06230 b8f56a8f2092fd6ef972f301073df693 519 Gene3D G3DSA:1.20.1250.20 271 427 2.9E-17 T 23-04-2016 RBRH_RS06230 b8f56a8f2092fd6ef972f301073df693 519 Gene3D G3DSA:1.20.1250.20 479 505 2.9E-17 T 23-04-2016 RBRH_RS06230 b8f56a8f2092fd6ef972f301073df693 519 SUPERFAMILY SSF103473 255 426 8.11E-70 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS06230 b8f56a8f2092fd6ef972f301073df693 519 SUPERFAMILY SSF103473 7 197 8.11E-70 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS06230 b8f56a8f2092fd6ef972f301073df693 519 SUPERFAMILY SSF103473 478 504 8.11E-70 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS06230 b8f56a8f2092fd6ef972f301073df693 519 PANTHER PTHR23501:SF52 10 507 2.5E-232 T 23-04-2016 RBRH_RS06230 b8f56a8f2092fd6ef972f301073df693 519 Pfam PF07690 Major Facilitator Superfamily 24 416 1.8E-58 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS06230 b8f56a8f2092fd6ef972f301073df693 519 Gene3D G3DSA:1.20.1250.20 20 204 5.7E-35 T 23-04-2016 RBRH_RS06230 b8f56a8f2092fd6ef972f301073df693 519 PANTHER PTHR23501 10 507 2.5E-232 T 23-04-2016 RBRH_RS08175 0da4d2e15b56fa8bc4070b3352dc61dd 174 PANTHER PTHR13061 3 161 5.7E-68 T 23-04-2016 RBRH_RS08175 0da4d2e15b56fa8bc4070b3352dc61dd 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 2.0E-7 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS08175 0da4d2e15b56fa8bc4070b3352dc61dd 174 Gene3D G3DSA:2.160.10.10 4 168 8.0E-49 T 23-04-2016 RBRH_RS08175 0da4d2e15b56fa8bc4070b3352dc61dd 174 SUPERFAMILY SSF51161 5 170 2.22E-47 T 23-04-2016 IPR011004 Trimeric LpxA-like RBRH_RS04705 a29d69a20affd722181c051f2c780aa0 255 PANTHER PTHR30188:SF4 1 254 4.9E-102 T 23-04-2016 RBRH_RS04705 a29d69a20affd722181c051f2c780aa0 255 PANTHER PTHR30188 1 254 4.9E-102 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RBRH_RS04705 a29d69a20affd722181c051f2c780aa0 255 Pfam PF02405 Permease MlaE 40 252 2.6E-76 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RBRH_RS04705 a29d69a20affd722181c051f2c780aa0 255 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 34 254 9.5E-83 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RBRH_RS08250 6bd61f8179e48e932de030c1d6d83894 567 Pfam PF01368 DHH family 74 203 7.8E-11 T 23-04-2016 IPR001667 DDH domain RBRH_RS08250 6bd61f8179e48e932de030c1d6d83894 567 SUPERFAMILY SSF64182 48 464 1.83E-115 T 23-04-2016 RBRH_RS08250 6bd61f8179e48e932de030c1d6d83894 567 Pfam PF02272 DHHA1 domain 379 449 2.8E-11 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RBRH_RS08250 6bd61f8179e48e932de030c1d6d83894 567 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 563 1.3E-141 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 RBRH_RS08250 6bd61f8179e48e932de030c1d6d83894 567 PANTHER PTHR30255 19 566 1.9E-187 T 23-04-2016 RBRH_RS08250 6bd61f8179e48e932de030c1d6d83894 567 PANTHER PTHR30255:SF2 19 566 1.9E-187 T 23-04-2016 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 195 217 3.9E-33 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 3.9E-33 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 237 257 3.9E-33 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 364 375 3.9E-33 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 SMART SM00839 206 436 5.7E-101 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 SUPERFAMILY SSF51735 204 438 2.08E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 204 436 7.4E-76 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 PANTHER PTHR11606 35 437 4.0E-181 T 23-04-2016 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 SUPERFAMILY SSF53223 19 206 1.6E-69 T 23-04-2016 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 Gene3D G3DSA:3.40.192.10 61 202 7.1E-59 T 23-04-2016 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 Gene3D G3DSA:3.40.50.720 204 438 5.7E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 PIRSF PIRSF000185 29 439 6.0E-162 T 23-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 186 1.3E-55 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 RBRH_RS10750 fb8db83d9ac687b91d513c2fecbdc3b5 439 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RBRH_RS11535 e2b126167a81670a29a0a10e7b2af98d 462 SUPERFAMILY SSF53383 13 439 2.85E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS11535 e2b126167a81670a29a0a10e7b2af98d 462 PANTHER PTHR11986:SF8 4 446 8.0E-159 T 23-04-2016 RBRH_RS11535 e2b126167a81670a29a0a10e7b2af98d 462 Pfam PF00202 Aminotransferase class-III 26 435 3.9E-105 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS11535 e2b126167a81670a29a0a10e7b2af98d 462 PANTHER PTHR11986 4 446 8.0E-159 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS11535 e2b126167a81670a29a0a10e7b2af98d 462 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS11535 e2b126167a81670a29a0a10e7b2af98d 462 Gene3D G3DSA:3.90.1150.10 6 66 1.2E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS11535 e2b126167a81670a29a0a10e7b2af98d 462 Gene3D G3DSA:3.90.1150.10 344 441 1.2E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS11535 e2b126167a81670a29a0a10e7b2af98d 462 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 16 435 9.8E-153 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 RBRH_RS11535 e2b126167a81670a29a0a10e7b2af98d 462 PIRSF PIRSF000521 21 441 1.5E-26 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS11535 e2b126167a81670a29a0a10e7b2af98d 462 Gene3D G3DSA:3.40.640.10 67 340 2.1E-84 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS01555 3dde00b141530ec6f2e04784912d9de4 270 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 255 4.5E-74 T 23-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS01555 3dde00b141530ec6f2e04784912d9de4 270 Gene3D G3DSA:3.20.20.70 6 266 2.0E-70 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS01555 3dde00b141530ec6f2e04784912d9de4 270 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS01555 3dde00b141530ec6f2e04784912d9de4 270 SUPERFAMILY SSF51366 3 261 2.31E-77 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RBRH_RS01555 3dde00b141530ec6f2e04784912d9de4 270 SMART SM00934 17 255 7.8E-52 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS01555 3dde00b141530ec6f2e04784912d9de4 270 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 249 7.9E-32 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS01555 3dde00b141530ec6f2e04784912d9de4 270 PANTHER PTHR19278:SF1 1 225 1.3E-61 T 23-04-2016 RBRH_RS01555 3dde00b141530ec6f2e04784912d9de4 270 PANTHER PTHR19278 1 225 1.3E-61 T 23-04-2016 RBRH_RS01555 3dde00b141530ec6f2e04784912d9de4 270 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 268 35.365 T 23-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS06575 0af4c4236a5dab426383ce4d5078ca8b 329 Pfam PF00892 EamA-like transporter family 3 137 1.0E-10 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RBRH_RS06575 0af4c4236a5dab426383ce4d5078ca8b 329 PANTHER PTHR12715 1 307 1.4E-74 T 23-04-2016 RBRH_RS06575 0af4c4236a5dab426383ce4d5078ca8b 329 PANTHER PTHR12715:SF21 1 307 1.4E-74 T 23-04-2016 RBRH_RS06575 0af4c4236a5dab426383ce4d5078ca8b 329 SUPERFAMILY SSF103481 204 305 7.45E-6 T 23-04-2016 RBRH_RS06575 0af4c4236a5dab426383ce4d5078ca8b 329 SUPERFAMILY SSF103481 43 138 3.4E-6 T 23-04-2016 RBRH_RS02580 64e317678c6f0f9838092bd70a228dbe 175 Gene3D G3DSA:2.60.40.200 41 174 5.1E-30 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02580 64e317678c6f0f9838092bd70a228dbe 175 PANTHER PTHR10003 50 173 1.2E-14 T 23-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 RBRH_RS02580 64e317678c6f0f9838092bd70a228dbe 175 SUPERFAMILY SSF49329 41 173 4.71E-30 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS02580 64e317678c6f0f9838092bd70a228dbe 175 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 47 173 5.1E-26 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RBRH_RS06185 6ced9c80384536a73fba8179c2b09f22 563 PANTHER PTHR21600:SF2 196 433 5.9E-83 T 23-04-2016 RBRH_RS06185 6ced9c80384536a73fba8179c2b09f22 563 SUPERFAMILY SSF55120 256 427 5.44E-41 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS06185 6ced9c80384536a73fba8179c2b09f22 563 PANTHER PTHR21600 196 433 5.9E-83 T 23-04-2016 RBRH_RS06185 6ced9c80384536a73fba8179c2b09f22 563 SMART SM00363 195 255 9.5E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS06185 6ced9c80384536a73fba8179c2b09f22 563 Pfam PF01479 S4 domain 197 238 2.9E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS06185 6ced9c80384536a73fba8179c2b09f22 563 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 296 310 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RBRH_RS06185 6ced9c80384536a73fba8179c2b09f22 563 Pfam PF00849 RNA pseudouridylate synthase 258 391 3.5E-15 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS06185 6ced9c80384536a73fba8179c2b09f22 563 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 262 422 4.9E-50 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RBRH_RS06185 6ced9c80384536a73fba8179c2b09f22 563 Gene3D G3DSA:3.10.290.10 197 249 4.0E-16 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS06185 6ced9c80384536a73fba8179c2b09f22 563 SUPERFAMILY SSF55174 197 287 4.84E-16 T 23-04-2016 RBRH_RS09095 18d5d634d152c087f12fcb1c946519a6 263 Pfam PF00121 Triosephosphate isomerase 8 247 7.3E-85 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RBRH_RS09095 18d5d634d152c087f12fcb1c946519a6 263 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 9 241 1.1E-58 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RBRH_RS09095 18d5d634d152c087f12fcb1c946519a6 263 SUPERFAMILY SSF51351 6 248 1.57E-83 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RBRH_RS09095 18d5d634d152c087f12fcb1c946519a6 263 Gene3D G3DSA:3.20.20.70 6 251 6.0E-96 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS09095 18d5d634d152c087f12fcb1c946519a6 263 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 6 251 38.311 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RBRH_RS09095 18d5d634d152c087f12fcb1c946519a6 263 PANTHER PTHR21139 6 247 2.6E-107 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RBRH_RS09095 18d5d634d152c087f12fcb1c946519a6 263 ProSitePatterns PS00171 Triosephosphate isomerase active site. 170 180 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RBRH_RS07060 4737c02c6107e3bd4a9d8356902a9b31 260 SUPERFAMILY SSF109998 25 160 2.0E-17 T 23-04-2016 IPR027304 Trigger factor/SurA domain RBRH_RS07060 4737c02c6107e3bd4a9d8356902a9b31 260 PANTHER PTHR10657 105 248 1.1E-40 T 23-04-2016 RBRH_RS07060 4737c02c6107e3bd4a9d8356902a9b31 260 PANTHER PTHR10657 53 77 1.1E-40 T 23-04-2016 RBRH_RS07060 4737c02c6107e3bd4a9d8356902a9b31 260 Pfam PF13616 PPIC-type PPIASE domain 130 222 7.3E-24 T 23-04-2016 RBRH_RS07060 4737c02c6107e3bd4a9d8356902a9b31 260 PANTHER PTHR10657:SF11 105 248 1.1E-40 T 23-04-2016 RBRH_RS07060 4737c02c6107e3bd4a9d8356902a9b31 260 PANTHER PTHR10657:SF11 53 77 1.1E-40 T 23-04-2016 RBRH_RS07060 4737c02c6107e3bd4a9d8356902a9b31 260 SUPERFAMILY SSF54534 131 221 3.07E-31 T 23-04-2016 RBRH_RS07060 4737c02c6107e3bd4a9d8356902a9b31 260 Gene3D G3DSA:3.10.50.40 126 246 3.1E-43 T 23-04-2016 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 438 33.587 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 435 5.3E-132 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 PANTHER PTHR21090:SF21 1 432 2.3E-179 T 23-04-2016 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 Gene3D G3DSA:3.65.10.10 248 433 3.2E-69 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 PIRSF PIRSF000505 7 438 2.7E-139 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 431 4.4E-127 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 SUPERFAMILY SSF55205 1 434 1.44E-125 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 ProSitePatterns PS00885 EPSP synthase signature 2. 349 367 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 PANTHER PTHR21090 1 432 2.3E-179 T 23-04-2016 RBRH_RS02960 4530ea2e1237ad1294dd501e7c83afb4 438 Gene3D G3DSA:3.65.10.10 22 247 1.9E-67 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RBRH_RS06035 62d1e8a5690fd7c2c7f2a85720838cba 318 Gene3D G3DSA:3.40.50.170 3 199 7.8E-50 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS06035 62d1e8a5690fd7c2c7f2a85720838cba 318 Gene3D G3DSA:3.10.25.10 206 294 1.4E-16 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS06035 62d1e8a5690fd7c2c7f2a85720838cba 318 Pfam PF02911 Formyl transferase, C-terminal domain 205 295 1.6E-14 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS06035 62d1e8a5690fd7c2c7f2a85720838cba 318 SUPERFAMILY SSF50486 204 294 9.26E-18 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RBRH_RS06035 62d1e8a5690fd7c2c7f2a85720838cba 318 Pfam PF00551 Formyl transferase 25 179 3.2E-29 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS06035 62d1e8a5690fd7c2c7f2a85720838cba 318 SUPERFAMILY SSF53328 5 203 1.16E-54 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS06035 62d1e8a5690fd7c2c7f2a85720838cba 318 PANTHER PTHR11138 3 291 7.1E-59 T 23-04-2016 RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 Pfam PF00639 PPIC-type PPIASE domain 196 290 3.6E-16 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 Hamap MF_01183 Chaperone SurA [surA]. 9 449 30.787 T 23-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 SUPERFAMILY SSF109998 42 220 8.5E-41 T 23-04-2016 IPR027304 Trigger factor/SurA domain RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 Pfam PF13616 PPIC-type PPIASE domain 307 403 5.4E-27 T 23-04-2016 RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 SUPERFAMILY SSF54534 307 406 6.08E-31 T 23-04-2016 RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 PANTHER PTHR10657 2 447 1.7E-88 T 23-04-2016 RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 Pfam PF09312 SurA N-terminal domain 42 159 2.1E-35 T 23-04-2016 IPR015391 SurA N-terminal RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 Gene3D G3DSA:3.10.50.40 307 427 2.3E-37 T 23-04-2016 RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 Gene3D G3DSA:3.10.50.40 190 294 8.2E-24 T 23-04-2016 RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 PANTHER PTHR10657:SF16 2 447 1.7E-88 T 23-04-2016 RBRH_RS10620 206d4f676abfae16bc568a68ca17990a 452 SUPERFAMILY SSF54534 193 293 1.05E-19 T 23-04-2016 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 Pfam PF00425 chorismate binding enzyme 144 414 1.4E-79 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 PANTHER PTHR11236:SF18 136 503 8.1E-136 T 23-04-2016 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 PRINTS PR00095 Anthranilate synthase component I signature 260 273 5.3E-10 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 PRINTS PR00095 Anthranilate synthase component I signature 246 259 5.3E-10 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 PRINTS PR00095 Anthranilate synthase component I signature 340 354 5.3E-10 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 Gene3D G3DSA:3.60.120.10 100 421 2.5E-121 T 23-04-2016 IPR005801 ADC synthase GO:0009058 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 Pfam PF01063 Amino-transferase class IV 426 632 3.1E-35 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 SUPERFAMILY SSF56752 360 633 7.98E-47 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 Gene3D G3DSA:3.30.470.10 425 499 2.2E-5 T 23-04-2016 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 114 418 7.3E-101 T 23-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 SUPERFAMILY SSF56322 126 421 1.96E-96 T 23-04-2016 IPR005801 ADC synthase GO:0009058 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 PANTHER PTHR11236 136 503 8.1E-136 T 23-04-2016 RBRH_RS01890 5dd1baf3cd7cf2594eb6830577f2726c 637 Gene3D G3DSA:3.20.10.10 523 629 1.6E-28 T 23-04-2016 RBRH_RS05305 272af8e65bbd6ff4889dd37d65279be6 156 SUPERFAMILY SSF55200 67 156 8.5E-35 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RBRH_RS05305 272af8e65bbd6ff4889dd37d65279be6 156 PANTHER PTHR10938 1 156 3.9E-61 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RBRH_RS05305 272af8e65bbd6ff4889dd37d65279be6 156 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 155 3.8E-63 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RBRH_RS05305 272af8e65bbd6ff4889dd37d65279be6 156 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 155 26.354 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RBRH_RS05305 272af8e65bbd6ff4889dd37d65279be6 156 Gene3D G3DSA:3.30.110.10 64 156 1.4E-41 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RBRH_RS05305 272af8e65bbd6ff4889dd37d65279be6 156 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 61 5.0E-25 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RBRH_RS05305 272af8e65bbd6ff4889dd37d65279be6 156 ProSitePatterns PS00938 Initiation factor 3 signature. 43 56 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RBRH_RS05305 272af8e65bbd6ff4889dd37d65279be6 156 SUPERFAMILY SSF54364 1 62 8.24E-24 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RBRH_RS05305 272af8e65bbd6ff4889dd37d65279be6 156 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 68 153 5.1E-39 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RBRH_RS05305 272af8e65bbd6ff4889dd37d65279be6 156 Gene3D G3DSA:3.10.20.80 1 62 1.1E-27 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RBRH_RS04435 716e4d6f34af54669c05ddc21350fd9a 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 23-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04435 716e4d6f34af54669c05ddc21350fd9a 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.321 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04435 716e4d6f34af54669c05ddc21350fd9a 64 PANTHER PTHR10916 1 64 2.9E-21 T 23-04-2016 RBRH_RS04435 716e4d6f34af54669c05ddc21350fd9a 64 Pfam PF00831 Ribosomal L29 protein 4 60 1.3E-21 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04435 716e4d6f34af54669c05ddc21350fd9a 64 SUPERFAMILY SSF46561 1 61 5.49E-20 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04435 716e4d6f34af54669c05ddc21350fd9a 64 Gene3D G3DSA:1.10.287.310 1 60 1.6E-25 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04435 716e4d6f34af54669c05ddc21350fd9a 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.0E-20 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 Pfam PF07478 D-ala D-ala ligase C-terminus 110 307 1.3E-55 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 PIRSF PIRSF039102 48 313 1.5E-76 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 70 81 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 Gene3D G3DSA:3.30.1490.20 113 184 1.7E-22 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 Pfam PF01820 D-ala D-ala ligase N-terminus 11 92 5.8E-17 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 10 311 32.709 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 11 309 5.1E-92 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 SUPERFAMILY SSF52440 11 103 1.63E-25 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 PANTHER PTHR23132 11 312 5.8E-77 T 23-04-2016 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 Gene3D G3DSA:3.30.470.20 185 309 8.7E-44 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 Gene3D G3DSA:3.30.470.20 92 110 8.7E-44 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 Gene3D G3DSA:3.40.50.20 11 91 1.3E-23 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 253 281 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01300 ef39912f3e74bf12a7d7a344f72cf964 313 SUPERFAMILY SSF56059 103 310 1.11E-52 T 23-04-2016 RBRH_RS01670 28fea2f4ba13b9700657612d42947754 453 PANTHER PTHR30354 4 453 1.9E-200 T 23-04-2016 RBRH_RS01670 28fea2f4ba13b9700657612d42947754 453 PIRSF PIRSF002746 4 453 4.0E-162 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RBRH_RS01670 28fea2f4ba13b9700657612d42947754 453 Pfam PF02447 GntP family permease 8 451 8.2E-161 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RBRH_RS01670 28fea2f4ba13b9700657612d42947754 453 PANTHER PTHR30354:SF1 4 453 1.9E-200 T 23-04-2016 RBRH_RS01670 28fea2f4ba13b9700657612d42947754 453 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 453 4.9E-151 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RBRH_RS11605 f3f3585540a2702a567d8830d8a0cabf 632 SMART SM00382 315 491 2.1E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS11605 f3f3585540a2702a567d8830d8a0cabf 632 SUPERFAMILY SSF161098 16 254 3.4E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS11605 f3f3585540a2702a567d8830d8a0cabf 632 Pfam PF00005 ABC transporter 316 441 4.2E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS11605 f3f3585540a2702a567d8830d8a0cabf 632 SUPERFAMILY SSF52540 300 518 2.37E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11605 f3f3585540a2702a567d8830d8a0cabf 632 PANTHER PTHR24220 319 515 6.1E-63 T 23-04-2016 RBRH_RS11605 f3f3585540a2702a567d8830d8a0cabf 632 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 215 2.5E-10 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS11605 f3f3585540a2702a567d8830d8a0cabf 632 Gene3D G3DSA:1.10.3720.10 24 254 6.5E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS11605 f3f3585540a2702a567d8830d8a0cabf 632 Gene3D G3DSA:3.40.50.300 315 515 8.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11605 f3f3585540a2702a567d8830d8a0cabf 632 ProSitePatterns PS00211 ABC transporters family signature. 414 428 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS03175 3ade573cc8d2fd919340325838a9cdc6 163 PANTHER PTHR37952 11 157 9.9E-49 T 23-04-2016 RBRH_RS03175 3ade573cc8d2fd919340325838a9cdc6 163 Pfam PF05981 CreA protein 32 157 1.9E-49 T 23-04-2016 IPR010292 Uncharacterised protein family CreA RBRH_RS03175 3ade573cc8d2fd919340325838a9cdc6 163 PIRSF PIRSF003174 5 163 2.0E-58 T 23-04-2016 IPR010292 Uncharacterised protein family CreA RBRH_RS03175 3ade573cc8d2fd919340325838a9cdc6 163 PANTHER PTHR37952:SF2 11 157 9.9E-49 T 23-04-2016 RBRH_RS11585 fc13f889fbd5d7bc69371e067502a01f 344 Gene3D G3DSA:3.40.190.10 92 180 7.4E-26 T 23-04-2016 RBRH_RS11585 fc13f889fbd5d7bc69371e067502a01f 344 Gene3D G3DSA:3.40.190.10 181 261 1.3E-22 T 23-04-2016 RBRH_RS11585 fc13f889fbd5d7bc69371e067502a01f 344 PANTHER PTHR30537 1 314 2.6E-123 T 23-04-2016 RBRH_RS11585 fc13f889fbd5d7bc69371e067502a01f 344 Gene3D G3DSA:1.10.10.10 3 85 6.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11585 fc13f889fbd5d7bc69371e067502a01f 344 SUPERFAMILY SSF53850 90 300 1.33E-48 T 23-04-2016 RBRH_RS11585 fc13f889fbd5d7bc69371e067502a01f 344 PANTHER PTHR30537:SF5 1 314 2.6E-123 T 23-04-2016 RBRH_RS11585 fc13f889fbd5d7bc69371e067502a01f 344 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.2E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS11585 fc13f889fbd5d7bc69371e067502a01f 344 Pfam PF03466 LysR substrate binding domain 90 297 3.2E-48 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS11585 fc13f889fbd5d7bc69371e067502a01f 344 SUPERFAMILY SSF46785 6 112 1.52E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11815 1aa6f694c0c9cfef852b1a55ceb7d493 530 PANTHER PTHR30290:SF14 16 530 2.4E-197 T 23-04-2016 RBRH_RS11815 1aa6f694c0c9cfef852b1a55ceb7d493 530 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 449 6.7E-99 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RBRH_RS11815 1aa6f694c0c9cfef852b1a55ceb7d493 530 PIRSF PIRSF002741 1 529 1.7E-113 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RBRH_RS11815 1aa6f694c0c9cfef852b1a55ceb7d493 530 Gene3D G3DSA:3.10.105.10 285 500 1.4E-64 T 23-04-2016 RBRH_RS11815 1aa6f694c0c9cfef852b1a55ceb7d493 530 PANTHER PTHR30290 16 530 2.4E-197 T 23-04-2016 RBRH_RS11815 1aa6f694c0c9cfef852b1a55ceb7d493 530 Gene3D G3DSA:3.90.76.10 34 213 7.3E-48 T 23-04-2016 RBRH_RS11815 1aa6f694c0c9cfef852b1a55ceb7d493 530 SUPERFAMILY SSF53850 24 529 3.16E-146 T 23-04-2016 RBRH_RS08020 f7d05a21794cf12bdbc2df668bb0069e 265 PANTHER PTHR23416:SF55 1 170 2.2E-85 T 23-04-2016 RBRH_RS08020 f7d05a21794cf12bdbc2df668bb0069e 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 151 2.7E-6 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS08020 f7d05a21794cf12bdbc2df668bb0069e 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 1.8E-6 T 23-04-2016 IPR001451 Hexapeptide repeat RBRH_RS08020 f7d05a21794cf12bdbc2df668bb0069e 265 PANTHER PTHR23416 1 170 2.2E-85 T 23-04-2016 RBRH_RS08020 f7d05a21794cf12bdbc2df668bb0069e 265 SUPERFAMILY SSF51161 5 169 2.63E-50 T 23-04-2016 IPR011004 Trimeric LpxA-like RBRH_RS08020 f7d05a21794cf12bdbc2df668bb0069e 265 PIRSF PIRSF000441 1 256 4.1E-82 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 RBRH_RS08020 f7d05a21794cf12bdbc2df668bb0069e 265 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 4.4E-71 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 RBRH_RS08020 f7d05a21794cf12bdbc2df668bb0069e 265 Gene3D G3DSA:2.160.10.10 65 169 3.1E-34 T 23-04-2016 RBRH_RS08020 f7d05a21794cf12bdbc2df668bb0069e 265 Gene3D G3DSA:1.10.3130.10 1 64 2.8E-23 T 23-04-2016 RBRH_RS03650 370fccc3aa762564e9c841a1eeaa822e 234 PANTHER PTHR10010:SF14 1 222 1.5E-68 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RBRH_RS03650 370fccc3aa762564e9c841a1eeaa822e 234 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 4.1E-71 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RBRH_RS03650 370fccc3aa762564e9c841a1eeaa822e 234 PANTHER PTHR10010 1 222 1.5E-68 T 23-04-2016 RBRH_RS03650 370fccc3aa762564e9c841a1eeaa822e 234 Pfam PF01895 PhoU domain 128 210 2.0E-16 T 23-04-2016 IPR026022 PhoU domain RBRH_RS03650 370fccc3aa762564e9c841a1eeaa822e 234 Pfam PF01895 PhoU domain 22 109 6.5E-18 T 23-04-2016 IPR026022 PhoU domain RBRH_RS03650 370fccc3aa762564e9c841a1eeaa822e 234 PIRSF PIRSF003107 3 224 1.7E-61 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RBRH_RS03650 370fccc3aa762564e9c841a1eeaa822e 234 Gene3D G3DSA:1.20.58.220 125 231 2.0E-31 T 23-04-2016 RBRH_RS03650 370fccc3aa762564e9c841a1eeaa822e 234 SUPERFAMILY SSF109755 8 229 1.15E-67 T 23-04-2016 RBRH_RS03650 370fccc3aa762564e9c841a1eeaa822e 234 Gene3D G3DSA:1.20.58.220 5 117 5.7E-33 T 23-04-2016 RBRH_RS11860 13a2bb7b492eb356df4162ce1478eee8 731 Gene3D G3DSA:2.40.170.20 187 730 1.5E-137 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RBRH_RS11860 13a2bb7b492eb356df4162ce1478eee8 731 Gene3D G3DSA:2.170.130.10 57 179 2.2E-33 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RBRH_RS11860 13a2bb7b492eb356df4162ce1478eee8 731 PANTHER PTHR32552:SF8 66 731 3.8E-133 T 23-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RBRH_RS11860 13a2bb7b492eb356df4162ce1478eee8 731 PANTHER PTHR32552:SF8 14 50 3.8E-133 T 23-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RBRH_RS11860 13a2bb7b492eb356df4162ce1478eee8 731 SUPERFAMILY SSF56935 40 730 2.66E-125 T 23-04-2016 RBRH_RS11860 13a2bb7b492eb356df4162ce1478eee8 731 Pfam PF00593 TonB dependent receptor 501 730 9.4E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RBRH_RS11860 13a2bb7b492eb356df4162ce1478eee8 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 172 6.0E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RBRH_RS11860 13a2bb7b492eb356df4162ce1478eee8 731 PANTHER PTHR32552 66 731 3.8E-133 T 23-04-2016 RBRH_RS11860 13a2bb7b492eb356df4162ce1478eee8 731 PANTHER PTHR32552 14 50 3.8E-133 T 23-04-2016 RBRH_RS11860 13a2bb7b492eb356df4162ce1478eee8 731 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 76 729 2.4E-92 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RBRH_RS02600 876526ac2cd5c39c88936c377ff700a8 351 SMART SM00530 66 138 9.4E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RBRH_RS02600 876526ac2cd5c39c88936c377ff700a8 351 PANTHER PTHR35010:SF2 46 204 9.0E-78 T 23-04-2016 RBRH_RS02600 876526ac2cd5c39c88936c377ff700a8 351 PANTHER PTHR35010:SF2 220 351 9.0E-78 T 23-04-2016 RBRH_RS02600 876526ac2cd5c39c88936c377ff700a8 351 Pfam PF13560 Helix-turn-helix domain 62 141 7.5E-17 T 23-04-2016 RBRH_RS02600 876526ac2cd5c39c88936c377ff700a8 351 SUPERFAMILY SSF47413 86 137 2.35E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS02600 876526ac2cd5c39c88936c377ff700a8 351 Gene3D G3DSA:1.10.260.40 55 136 9.0E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS02600 876526ac2cd5c39c88936c377ff700a8 351 PANTHER PTHR35010 46 204 9.0E-78 T 23-04-2016 RBRH_RS02600 876526ac2cd5c39c88936c377ff700a8 351 PANTHER PTHR35010 220 351 9.0E-78 T 23-04-2016 RBRH_RS01635 f1827beb3ec52bbaff97faf97eda9b7a 182 Gene3D G3DSA:3.30.160.150 19 160 1.9E-38 T 23-04-2016 RBRH_RS01635 f1827beb3ec52bbaff97faf97eda9b7a 182 PANTHER PTHR38098:SF1 1 159 7.6E-18 T 23-04-2016 RBRH_RS01635 f1827beb3ec52bbaff97faf97eda9b7a 182 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 160 22.146 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RBRH_RS01635 f1827beb3ec52bbaff97faf97eda9b7a 182 Pfam PF04390 Lipopolysaccharide-assembly 10 155 4.2E-18 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RBRH_RS01635 f1827beb3ec52bbaff97faf97eda9b7a 182 PANTHER PTHR38098 1 159 7.6E-18 T 23-04-2016 RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 Pfam PF02562 PhoH-like protein 418 621 3.0E-53 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 SUPERFAMILY SSF88723 170 231 4.51E-11 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 SUPERFAMILY SSF88723 268 320 4.51E-11 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 Gene3D G3DSA:3.40.50.300 415 630 3.6E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 PANTHER PTHR30473:SF2 169 345 3.6E-176 T 23-04-2016 RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 PANTHER PTHR30473:SF2 372 631 3.6E-176 T 23-04-2016 RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 Pfam PF13638 PIN domain 172 317 6.8E-39 T 23-04-2016 IPR002716 PIN domain RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 SMART SM00670 170 305 8.4E-10 T 23-04-2016 IPR002716 PIN domain RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 Gene3D G3DSA:3.40.50.1010 171 230 2.6E-9 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 Gene3D G3DSA:3.40.50.1010 268 324 2.6E-9 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 SUPERFAMILY SSF52540 417 503 9.02E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 SUPERFAMILY SSF52540 536 610 9.02E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 PANTHER PTHR30473 169 345 3.6E-176 T 23-04-2016 RBRH_RS06015 d79bf2979c7ea4452b03b72c2cbd1c33 631 PANTHER PTHR30473 372 631 3.6E-176 T 23-04-2016 RBRH_RS06340 2625433d6d8f104513138b15e9b7a1da 312 PANTHER PTHR34611:SF3 2 312 3.8E-184 T 23-04-2016 RBRH_RS06340 2625433d6d8f104513138b15e9b7a1da 312 PANTHER PTHR34611 2 312 3.8E-184 T 23-04-2016 RBRH_RS06340 2625433d6d8f104513138b15e9b7a1da 312 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 310 2.3E-63 T 23-04-2016 IPR010106 Conserved hypothetical protein CHP01784 RBRH_RS06340 2625433d6d8f104513138b15e9b7a1da 312 Pfam PF04754 Putative transposase, YhgA-like 8 209 8.1E-86 T 23-04-2016 IPR006842 Transposase (putative), YhgA-like RBRH_RS03350 9116908be437cc8eb7a67777e58f34ca 348 PIRSF PIRSF005427 12 348 1.6E-93 T 23-04-2016 IPR005588 MucB/RseB RBRH_RS03350 9116908be437cc8eb7a67777e58f34ca 348 Pfam PF17188 MucB/RseB C-terminal domain 243 343 2.3E-25 T 23-04-2016 IPR033436 MucB/RseB, C-terminal RBRH_RS03350 9116908be437cc8eb7a67777e58f34ca 348 Gene3D G3DSA:2.50.20.10 56 212 3.6E-13 T 23-04-2016 RBRH_RS03350 9116908be437cc8eb7a67777e58f34ca 348 PANTHER PTHR38782 24 348 5.0E-47 T 23-04-2016 RBRH_RS03350 9116908be437cc8eb7a67777e58f34ca 348 Pfam PF03888 MucB/RseB N-terminal domain 49 224 5.3E-63 T 23-04-2016 IPR033434 MucB/RseB, N-terminal RBRH_RS03350 9116908be437cc8eb7a67777e58f34ca 348 PANTHER PTHR38782:SF1 24 348 5.0E-47 T 23-04-2016 RBRH_RS09475 a539298c267d702762ee438fd6b74a4c 100 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 99 8.0E-34 T 23-04-2016 IPR031451 mRNA interferase MqsR GO:0009372|GO:0017148|GO:0042710 RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 PANTHER PTHR18901 8 224 5.4E-50 T 23-04-2016 RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 Gene3D G3DSA:3.40.50.1000 77 219 1.3E-40 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 5.1E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 5.1E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 5.1E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 5.1E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 Gene3D G3DSA:1.10.150.240 17 76 1.5E-5 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 SUPERFAMILY SSF56784 7 219 8.95E-54 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 181 1.4E-29 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 183 3.8E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS06660 dfe7374711bdb44bd4b6bbea9aea0419 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 181 9.7E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS11120 dcc47b2d1708af30104bd145ce46767b 231 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 25 230 2.0E-49 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS11120 dcc47b2d1708af30104bd145ce46767b 231 Gene3D G3DSA:3.90.850.10 20 231 1.6E-76 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS11120 dcc47b2d1708af30104bd145ce46767b 231 PANTHER PTHR11820 23 230 9.0E-85 T 23-04-2016 RBRH_RS11120 dcc47b2d1708af30104bd145ce46767b 231 SUPERFAMILY SSF56529 19 231 4.71E-68 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS11120 dcc47b2d1708af30104bd145ce46767b 231 PANTHER PTHR11820:SF7 23 230 9.0E-85 T 23-04-2016 RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 Gene3D G3DSA:3.40.190.10 183 258 7.4E-12 T 23-04-2016 RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.5E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 SUPERFAMILY SSF53850 91 296 5.43E-26 T 23-04-2016 RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 PANTHER PTHR30126:SF29 5 293 7.0E-61 T 23-04-2016 RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 Gene3D G3DSA:1.10.10.10 6 91 4.9E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 Gene3D G3DSA:3.40.190.10 109 182 4.6E-8 T 23-04-2016 RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 PANTHER PTHR30126 5 293 7.0E-61 T 23-04-2016 RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 Pfam PF03466 LysR substrate binding domain 91 295 1.6E-21 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS06615 c85b27426abb50966756d95bc18b334e 300 SUPERFAMILY SSF46785 6 90 2.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS07205 30597e8df9675f0f63149ae1d5dafc4c 245 PANTHER PTHR32125:SF4 7 245 6.9E-60 T 23-04-2016 RBRH_RS07205 30597e8df9675f0f63149ae1d5dafc4c 245 SUPERFAMILY SSF53448 5 239 6.28E-53 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS07205 30597e8df9675f0f63149ae1d5dafc4c 245 Gene3D G3DSA:3.90.550.10 4 240 4.9E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS07205 30597e8df9675f0f63149ae1d5dafc4c 245 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 239 2.8E-63 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS07205 30597e8df9675f0f63149ae1d5dafc4c 245 PANTHER PTHR32125 7 245 6.9E-60 T 23-04-2016 RBRH_RS07205 30597e8df9675f0f63149ae1d5dafc4c 245 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 23-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS07205 30597e8df9675f0f63149ae1d5dafc4c 245 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 240 6.7E-56 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS07205 30597e8df9675f0f63149ae1d5dafc4c 245 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 242 30.368 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS10590 9ab8054cc088ef2ee274e02a8061fafe 417 PANTHER PTHR35861 209 412 1.4E-59 T 23-04-2016 RBRH_RS10590 9ab8054cc088ef2ee274e02a8061fafe 417 Pfam PF04984 Phage tail sheath protein 152 410 7.0E-33 T 23-04-2016 IPR007067 Tail sheath protein RBRH_RS10590 9ab8054cc088ef2ee274e02a8061fafe 417 PANTHER PTHR35861:SF1 209 412 1.4E-59 T 23-04-2016 RBRH_RS02630 9794cf067d35b5e422c23ca66d714b76 87 Pfam PF01541 GIY-YIG catalytic domain 3 72 4.8E-12 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RBRH_RS02630 9794cf067d35b5e422c23ca66d714b76 87 PANTHER PTHR34477 1 86 5.6E-31 T 23-04-2016 RBRH_RS02630 9794cf067d35b5e422c23ca66d714b76 87 PANTHER PTHR34477:SF1 1 86 5.6E-31 T 23-04-2016 RBRH_RS02630 9794cf067d35b5e422c23ca66d714b76 87 SUPERFAMILY SSF82771 1 71 6.28E-12 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily RBRH_RS09370 ea225dca310f4db35a4e2ae98f5e467c 323 PANTHER PTHR11938:SF64 9 145 1.9E-46 T 23-04-2016 RBRH_RS09370 ea225dca310f4db35a4e2ae98f5e467c 323 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS09370 ea225dca310f4db35a4e2ae98f5e467c 323 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 154 2.1E-63 T 23-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 RBRH_RS09370 ea225dca310f4db35a4e2ae98f5e467c 323 Pfam PF14697 4Fe-4S dicluster domain 80 134 3.5E-17 T 23-04-2016 RBRH_RS09370 ea225dca310f4db35a4e2ae98f5e467c 323 SUPERFAMILY SSF54862 9 141 1.97E-29 T 23-04-2016 RBRH_RS09370 ea225dca310f4db35a4e2ae98f5e467c 323 PANTHER PTHR11938 9 145 1.9E-46 T 23-04-2016 RBRH_RS09370 ea225dca310f4db35a4e2ae98f5e467c 323 Pfam PF04060 Putative Fe-S cluster 15 47 9.0E-13 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 RBRH_RS09370 ea225dca310f4db35a4e2ae98f5e467c 323 Gene3D G3DSA:3.30.70.20 50 126 4.1E-15 T 23-04-2016 RBRH_RS09370 ea225dca310f4db35a4e2ae98f5e467c 323 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS09370 ea225dca310f4db35a4e2ae98f5e467c 323 Gene3D G3DSA:1.10.1060.10 127 165 2.4E-4 T 23-04-2016 RBRH_RS10340 61b383eb4122e0364c0dc843329844d3 220 Pfam PF00156 Phosphoribosyl transferase domain 11 200 4.2E-23 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RBRH_RS10340 61b383eb4122e0364c0dc843329844d3 220 SUPERFAMILY SSF53271 6 214 1.37E-41 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS10340 61b383eb4122e0364c0dc843329844d3 220 Gene3D G3DSA:3.40.50.2020 100 209 3.2E-35 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS10340 61b383eb4122e0364c0dc843329844d3 220 Gene3D G3DSA:3.40.50.2020 3 65 3.2E-35 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS10340 61b383eb4122e0364c0dc843329844d3 220 PANTHER PTHR31299 5 214 3.0E-66 T 23-04-2016 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 Gene3D G3DSA:1.10.10.10 344 418 6.3E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 PANTHER PTHR30514 22 336 7.3E-78 T 23-04-2016 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 SUPERFAMILY SSF53697 437 598 4.96E-35 T 23-04-2016 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 Pfam PF02685 Glucokinase 22 330 1.5E-109 T 23-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 TIGRFAM TIGR00749 glk: glucokinase 22 325 3.5E-97 T 23-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 Hamap MF_00524 Glucokinase [glk]. 18 332 36.534 T 23-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 Gene3D G3DSA:3.40.50.10490 437 599 1.2E-32 T 23-04-2016 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 SUPERFAMILY SSF53067 24 333 9.88E-59 T 23-04-2016 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 ProSitePatterns PS00356 LacI-type HTH domain signature. 377 395 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 PANTHER PTHR30514:SF0 22 336 7.3E-78 T 23-04-2016 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 SUPERFAMILY SSF46689 344 416 1.04E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 Gene3D G3DSA:3.40.367.20 116 315 4.1E-68 T 23-04-2016 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 Pfam PF01418 Helix-turn-helix domain, rpiR family 345 412 4.6E-18 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RBRH_RS09670 4795a4c6fad1b7835e46d9b52564298a 639 Pfam PF01380 SIS domain 464 592 2.0E-18 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RBRH_RS09990 20c56161549cd9a6b764d42d63d92de5 146 Gene3D G3DSA:3.30.420.140 7 133 1.5E-41 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RBRH_RS09990 20c56161549cd9a6b764d42d63d92de5 146 PANTHER PTHR33317 7 134 2.2E-30 T 23-04-2016 RBRH_RS09990 20c56161549cd9a6b764d42d63d92de5 146 SMART SM00732 6 106 8.0E-26 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RBRH_RS09990 20c56161549cd9a6b764d42d63d92de5 146 Pfam PF03652 Holliday junction resolvase 7 131 4.5E-36 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RBRH_RS09990 20c56161549cd9a6b764d42d63d92de5 146 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 9 130 4.3E-28 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RBRH_RS09990 20c56161549cd9a6b764d42d63d92de5 146 SUPERFAMILY SSF53098 7 132 5.31E-36 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS09990 20c56161549cd9a6b764d42d63d92de5 146 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 6 133 22.3 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RBRH_RS06985 1baf9806b958c9fb1c3e3b2552be38b5 357 SUPERFAMILY SSF52540 14 80 6.14E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06985 1baf9806b958c9fb1c3e3b2552be38b5 357 SUPERFAMILY SSF52540 119 234 6.14E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06985 1baf9806b958c9fb1c3e3b2552be38b5 357 PANTHER PTHR11669 126 215 4.9E-48 T 23-04-2016 RBRH_RS06985 1baf9806b958c9fb1c3e3b2552be38b5 357 PANTHER PTHR11669 22 84 4.9E-48 T 23-04-2016 RBRH_RS06985 1baf9806b958c9fb1c3e3b2552be38b5 357 Pfam PF13177 DNA polymerase III, delta subunit 18 200 1.3E-39 T 23-04-2016 RBRH_RS06985 1baf9806b958c9fb1c3e3b2552be38b5 357 PANTHER PTHR11669:SF8 126 215 4.9E-48 T 23-04-2016 RBRH_RS06985 1baf9806b958c9fb1c3e3b2552be38b5 357 PANTHER PTHR11669:SF8 22 84 4.9E-48 T 23-04-2016 RBRH_RS06985 1baf9806b958c9fb1c3e3b2552be38b5 357 Gene3D G3DSA:3.40.50.300 17 79 2.9E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06985 1baf9806b958c9fb1c3e3b2552be38b5 357 Gene3D G3DSA:3.40.50.300 118 202 2.9E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06985 1baf9806b958c9fb1c3e3b2552be38b5 357 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 233 1.1E-59 T 23-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 Hamap MF_00974 DNA primase [dnaG]. 1 617 27.84 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 Gene3D G3DSA:3.90.980.10 128 255 2.6E-42 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 SMART SM00493 274 345 1.0E-15 T 23-04-2016 IPR006171 Toprim domain RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 Gene3D G3DSA:1.20.50.20 383 440 7.1E-16 T 23-04-2016 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 Pfam PF10410 DnaB-helicase binding domain of primase 384 434 1.4E-8 T 23-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 TIGRFAM TIGR01391 dnaG: DNA primase 2 433 6.2E-132 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 Gene3D G3DSA:3.90.580.10 2 97 5.3E-39 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 SMART SM00766 470 616 0.0037 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 SUPERFAMILY SSF56731 128 436 2.75E-102 T 23-04-2016 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 SMART SM00400 33 87 1.7E-32 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 Pfam PF08275 DNA primase catalytic core, N-terminal domain 138 266 3.8E-37 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 PANTHER PTHR30313 1 588 2.6E-135 T 23-04-2016 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 Pfam PF13662 Toprim domain 275 343 6.8E-16 T 23-04-2016 IPR006171 Toprim domain RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 Gene3D G3DSA:3.40.1360.10 256 381 1.2E-42 T 23-04-2016 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 Pfam PF01807 CHC2 zinc finger 3 96 6.2E-38 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 PIRSF PIRSF002811 1 628 1.2E-137 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RBRH_RS04190 08f3de3dd9b5d600039a57b12b0bf625 635 SUPERFAMILY SSF57783 2 97 3.06E-35 T 23-04-2016 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 PRINTS PR00118 Beta-lactamase class A signature 57 81 2.1E-70 T 23-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 PRINTS PR00118 Beta-lactamase class A signature 166 190 2.1E-70 T 23-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 PRINTS PR00118 Beta-lactamase class A signature 130 155 2.1E-70 T 23-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 PRINTS PR00118 Beta-lactamase class A signature 245 260 2.1E-70 T 23-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 PRINTS PR00118 Beta-lactamase class A signature 192 217 2.1E-70 T 23-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 PRINTS PR00118 Beta-lactamase class A signature 88 105 2.1E-70 T 23-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 PRINTS PR00118 Beta-lactamase class A signature 228 243 2.1E-70 T 23-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 ProSitePatterns PS00146 Beta-lactamase class-A active site. 90 105 - T 23-04-2016 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 PANTHER PTHR35333 58 312 4.0E-88 T 23-04-2016 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 Pfam PF13354 Beta-lactamase enzyme family 78 284 3.3E-39 T 23-04-2016 RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 Gene3D G3DSA:3.40.710.10 56 312 1.5E-105 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 SUPERFAMILY SSF56601 57 311 1.77E-77 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS06710 d72c4596fdcc54defa7db02eada539a6 313 PANTHER PTHR35333:SF2 58 312 4.0E-88 T 23-04-2016 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 SUPERFAMILY SSF50249 627 701 8.95E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Gene3D G3DSA:3.30.1370.10 559 624 4.5E-26 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Pfam PF03725 3' exoribonuclease family, domain 2 149 212 9.3E-12 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 SUPERFAMILY SSF54211 3 146 1.42E-52 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 698 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Pfam PF00575 S1 RNA binding domain 626 697 1.7E-17 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 PIRSF PIRSF005499 3 721 2.9E-298 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 327 6.9E-19 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Gene3D G3DSA:3.30.230.70 320 548 1.8E-91 T 23-04-2016 IPR027408 PNPase/RNase PH domain RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Gene3D G3DSA:3.30.230.70 3 226 1.3E-84 T 23-04-2016 IPR027408 PNPase/RNase PH domain RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 PANTHER PTHR11252 2 702 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 SMART SM00322 559 624 1.7E-14 T 23-04-2016 IPR004087 K Homology domain GO:0003676 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 SUPERFAMILY SSF54791 561 647 3.53E-23 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Pfam PF01138 3' exoribonuclease family, domain 1 331 463 1.2E-24 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Pfam PF01138 3' exoribonuclease family, domain 1 17 146 3.7E-21 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 SUPERFAMILY SSF55666 147 237 1.4E-29 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 SMART SM00316 627 697 6.4E-23 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Gene3D G3DSA:1.10.10.400 241 319 6.2E-21 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 SUPERFAMILY SSF55666 457 553 1.29E-27 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 700 30.18 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Gene3D G3DSA:2.40.50.140 625 701 3.4E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 PANTHER PTHR11252:SF0 2 702 0.0 T 23-04-2016 RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 SUPERFAMILY SSF54211 300 495 3.75E-51 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS09105 ea9ddf9604fd4b3fa0670a9e90ce6ab3 724 Pfam PF00013 KH domain 564 620 4.8E-11 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RBRH_RS01990 7a4264c4d7b9b1f6b6ee4e3b00e38a85 163 SUPERFAMILY SSF55826 7 159 9.16E-41 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RBRH_RS01990 7a4264c4d7b9b1f6b6ee4e3b00e38a85 163 PIRSF PIRSF006181 5 162 4.5E-46 T 23-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RBRH_RS01990 7a4264c4d7b9b1f6b6ee4e3b00e38a85 163 Pfam PF04073 Aminoacyl-tRNA editing domain 37 148 1.2E-23 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RBRH_RS01990 7a4264c4d7b9b1f6b6ee4e3b00e38a85 163 PANTHER PTHR30411 1 154 9.2E-46 T 23-04-2016 RBRH_RS01990 7a4264c4d7b9b1f6b6ee4e3b00e38a85 163 PANTHER PTHR30411:SF0 1 154 9.2E-46 T 23-04-2016 RBRH_RS01990 7a4264c4d7b9b1f6b6ee4e3b00e38a85 163 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 10 156 9.5E-46 T 23-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RBRH_RS01990 7a4264c4d7b9b1f6b6ee4e3b00e38a85 163 Gene3D G3DSA:3.90.960.10 3 159 3.7E-47 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RBRH_RS08305 805cfb164292675eb9181358ddc85adf 176 PANTHER PTHR33221 2 156 9.1E-57 T 23-04-2016 RBRH_RS08305 805cfb164292675eb9181358ddc85adf 176 Gene3D G3DSA:1.10.10.10 1 138 4.8E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS08305 805cfb164292675eb9181358ddc85adf 176 Pfam PF02082 Transcriptional regulator 1 83 1.4E-27 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type RBRH_RS08305 805cfb164292675eb9181358ddc85adf 176 PANTHER PTHR33221:SF1 2 156 9.1E-57 T 23-04-2016 RBRH_RS08305 805cfb164292675eb9181358ddc85adf 176 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 135 3.1E-43 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type RBRH_RS08305 805cfb164292675eb9181358ddc85adf 176 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 138 3.7E-65 T 23-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 RBRH_RS08305 805cfb164292675eb9181358ddc85adf 176 SUPERFAMILY SSF46785 2 136 1.01E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS16220 d51820dbdb8272141a291c4f8e41447d 150 Pfam PF00872 Transposase, Mutator family 34 141 1.5E-23 T 23-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RBRH_RS16220 d51820dbdb8272141a291c4f8e41447d 150 PANTHER PTHR33217:SF1 15 142 6.2E-24 T 23-04-2016 RBRH_RS16220 d51820dbdb8272141a291c4f8e41447d 150 PANTHER PTHR33217 15 142 6.2E-24 T 23-04-2016 RBRH_RS10905 52e00a998a9f8743f6f5bc802e59e9e0 294 PANTHER PTHR30514 10 284 1.3E-47 T 23-04-2016 RBRH_RS10905 52e00a998a9f8743f6f5bc802e59e9e0 294 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 81 2.5E-12 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RBRH_RS10905 52e00a998a9f8743f6f5bc802e59e9e0 294 SUPERFAMILY SSF53697 104 284 1.2E-30 T 23-04-2016 RBRH_RS10905 52e00a998a9f8743f6f5bc802e59e9e0 294 Gene3D G3DSA:1.10.10.10 10 80 1.7E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10905 52e00a998a9f8743f6f5bc802e59e9e0 294 SUPERFAMILY SSF46689 9 80 8.96E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS10905 52e00a998a9f8743f6f5bc802e59e9e0 294 Pfam PF01380 SIS domain 132 259 1.1E-16 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RBRH_RS10905 52e00a998a9f8743f6f5bc802e59e9e0 294 PANTHER PTHR30514:SF1 10 284 1.3E-47 T 23-04-2016 RBRH_RS10905 52e00a998a9f8743f6f5bc802e59e9e0 294 Gene3D G3DSA:3.40.50.10490 102 276 2.4E-26 T 23-04-2016 RBRH_RS04710 bb4787bbed35d2b2dc9333b1ac777054 195 Pfam PF02470 MlaD protein 41 118 6.7E-22 T 23-04-2016 IPR003399 Mce/MlaD RBRH_RS04710 bb4787bbed35d2b2dc9333b1ac777054 195 PANTHER PTHR33371 1 148 3.1E-41 T 23-04-2016 RBRH_RS04710 bb4787bbed35d2b2dc9333b1ac777054 195 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 149 1.3E-58 T 23-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 RBRH_RS07245 0cafbf9a566c6a882b8846cffa4f2acd 121 SUPERFAMILY SSF88723 1 110 1.09E-23 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS07245 0cafbf9a566c6a882b8846cffa4f2acd 121 Pfam PF01850 PIN domain 5 106 1.2E-13 T 23-04-2016 IPR002716 PIN domain RBRH_RS07245 0cafbf9a566c6a882b8846cffa4f2acd 121 PANTHER PTHR33653 1 109 4.8E-14 T 23-04-2016 RBRH_RS07245 0cafbf9a566c6a882b8846cffa4f2acd 121 PANTHER PTHR33653:SF2 1 109 4.8E-14 T 23-04-2016 RBRH_RS07245 0cafbf9a566c6a882b8846cffa4f2acd 121 Gene3D G3DSA:3.40.50.1010 2 114 1.0E-23 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS10215 5ac26a0c3658341785a256780c196521 306 PANTHER PTHR11825 10 305 1.2E-118 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RBRH_RS10215 5ac26a0c3658341785a256780c196521 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 1.1E-139 T 23-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 RBRH_RS10215 5ac26a0c3658341785a256780c196521 306 SUPERFAMILY SSF56752 1 303 1.44E-105 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RBRH_RS10215 5ac26a0c3658341785a256780c196521 306 Gene3D G3DSA:3.20.10.10 134 295 3.1E-60 T 23-04-2016 RBRH_RS10215 5ac26a0c3658341785a256780c196521 306 Gene3D G3DSA:3.30.470.10 8 130 1.1E-41 T 23-04-2016 RBRH_RS10215 5ac26a0c3658341785a256780c196521 306 Pfam PF01063 Amino-transferase class IV 36 266 1.0E-59 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RBRH_RS10215 5ac26a0c3658341785a256780c196521 306 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 RBRH_RS10215 5ac26a0c3658341785a256780c196521 306 PANTHER PTHR11825:SF7 10 305 1.2E-118 T 23-04-2016 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 SMART SM00387 350 493 8.3E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 Gene3D G3DSA:3.30.565.10 304 497 2.2E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 298 3.0E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 Gene3D G3DSA:1.10.287.130 227 296 1.1E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 492 3.5E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 Pfam PF00672 HAMP domain 166 230 1.9E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 SMART SM00388 235 300 2.0E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 9.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 9.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 445 9.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 9.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 PANTHER PTHR24423 407 506 2.1E-62 T 23-04-2016 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 PANTHER PTHR24423 214 386 2.1E-62 T 23-04-2016 RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 SUPERFAMILY SSF55874 289 493 1.31E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 Pfam PF08521 Two-component sensor kinase N-terminal 19 157 3.4E-24 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal RBRH_RS00445 0b2fe5dbbaaa67df06c0d0a020a31d47 508 SUPERFAMILY SSF47384 218 299 2.16E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS05625 a699baf4a300a6724016cc9503268b0d 65 PANTHER PTHR36455 1 51 8.9E-15 T 23-04-2016 RBRH_RS05625 a699baf4a300a6724016cc9503268b0d 65 PANTHER PTHR36455:SF1 1 51 8.9E-15 T 23-04-2016 RBRH_RS05625 a699baf4a300a6724016cc9503268b0d 65 Pfam PF05717 IS66 Orf2 like protein 2 56 4.8E-20 T 23-04-2016 IPR008878 Transposase IS66, Orf2 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 Pfam PF01494 FAD binding domain 9 348 1.3E-25 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 Gene3D G3DSA:3.50.50.60 8 182 3.8E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 Gene3D G3DSA:3.50.50.60 272 360 3.8E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 393 4.1E-118 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 SUPERFAMILY SSF51905 271 387 5.44E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 SUPERFAMILY SSF51905 8 177 5.44E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 PANTHER PTHR13789 9 393 7.8E-92 T 23-04-2016 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 PANTHER PTHR13789:SF5 9 393 7.8E-92 T 23-04-2016 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 2.9E-20 T 23-04-2016 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.9E-20 T 23-04-2016 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 2.9E-20 T 23-04-2016 RBRH_RS05020 fde6723eb267b3c3e387ef2eeddc404c 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 2.9E-20 T 23-04-2016 RBRH_RS03015 a46f8967557addffc5e58d9ca4806487 397 Pfam PF13406 Transglycosylase SLT domain 63 370 3.0E-87 T 23-04-2016 IPR031304 Transglycosylase SLT domain 2 RBRH_RS03015 a46f8967557addffc5e58d9ca4806487 397 PANTHER PTHR30163 1 378 1.8E-100 T 23-04-2016 IPR011757 Lytic transglycosylase MltB RBRH_RS03015 a46f8967557addffc5e58d9ca4806487 397 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 68 373 3.5E-104 T 23-04-2016 IPR011757 Lytic transglycosylase MltB RBRH_RS03015 a46f8967557addffc5e58d9ca4806487 397 Gene3D G3DSA:1.10.530.10 110 164 2.0E-55 T 23-04-2016 RBRH_RS03015 a46f8967557addffc5e58d9ca4806487 397 Gene3D G3DSA:1.10.530.10 252 378 2.0E-55 T 23-04-2016 RBRH_RS03015 a46f8967557addffc5e58d9ca4806487 397 PANTHER PTHR30163:SF0 1 378 1.8E-100 T 23-04-2016 RBRH_RS03015 a46f8967557addffc5e58d9ca4806487 397 SUPERFAMILY SSF53955 58 376 7.59E-75 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 49 991 19.375 T 23-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 188 199 - T 23-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PANTHER PTHR30523:SF0 50 570 0.0 T 23-04-2016 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PANTHER PTHR30523:SF0 590 991 0.0 T 23-04-2016 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PANTHER PTHR30523 590 991 0.0 T 23-04-2016 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 SUPERFAMILY SSF51621 58 991 6.43E-299 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PANTHER PTHR30523 50 570 0.0 T 23-04-2016 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 Pfam PF00311 Phosphoenolpyruvate carboxylase 185 991 2.9E-287 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 296 311 1.3E-54 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 813 839 1.3E-54 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 674 703 1.3E-54 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 187 200 1.3E-54 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 239 255 1.3E-54 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 449 469 1.3E-54 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 632 652 1.3E-54 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 Gene3D G3DSA:1.20.1440.90 327 452 1.3E-22 T 23-04-2016 RBRH_RS02605 feb5a796902ccc98f18ae1c64ede5469 991 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 634 646 - T 23-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RBRH_RS05615 f67fea7220cae3729ba11c68df64957c 197 PANTHER PTHR41878 15 192 7.5E-47 T 23-04-2016 RBRH_RS05615 f67fea7220cae3729ba11c68df64957c 197 PANTHER PTHR41878:SF1 15 192 7.5E-47 T 23-04-2016 RBRH_RS05615 f67fea7220cae3729ba11c68df64957c 197 Gene3D G3DSA:3.10.290.30 19 189 1.2E-57 T 23-04-2016 IPR024047 Protein MM3350-like domain RBRH_RS05615 f67fea7220cae3729ba11c68df64957c 197 SUPERFAMILY SSF159941 19 189 1.7E-59 T 23-04-2016 IPR024047 Protein MM3350-like domain RBRH_RS05615 f67fea7220cae3729ba11c68df64957c 197 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 19 186 1.6E-60 T 23-04-2016 IPR012912 Plasmid pRiA4b, Orf3 RBRH_RS11805 891eb44154b932f1e889fe99b4bd5665 309 SUPERFAMILY SSF161098 100 287 2.35E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS11805 891eb44154b932f1e889fe99b4bd5665 309 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 76 4.6E-12 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RBRH_RS11805 891eb44154b932f1e889fe99b4bd5665 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 306 1.6E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS11805 891eb44154b932f1e889fe99b4bd5665 309 Gene3D G3DSA:1.10.3720.10 97 303 6.3E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS11805 891eb44154b932f1e889fe99b4bd5665 309 PANTHER PTHR30465 13 307 3.9E-119 T 23-04-2016 RBRH_RS11805 891eb44154b932f1e889fe99b4bd5665 309 PANTHER PTHR30465:SF10 13 307 3.9E-119 T 23-04-2016 RBRH_RS00030 59695a2e690472a87a71d9b81a648762 731 Gene3D G3DSA:3.40.50.300 477 663 2.3E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00030 59695a2e690472a87a71d9b81a648762 731 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 525 648 8.7E-24 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RBRH_RS00030 59695a2e690472a87a71d9b81a648762 731 PANTHER PTHR23073:SF37 517 728 7.2E-34 T 23-04-2016 RBRH_RS00030 59695a2e690472a87a71d9b81a648762 731 PANTHER PTHR23073 517 728 7.2E-34 T 23-04-2016 RBRH_RS00030 59695a2e690472a87a71d9b81a648762 731 PANTHER PTHR23073 116 434 7.2E-34 T 23-04-2016 RBRH_RS00030 59695a2e690472a87a71d9b81a648762 731 PANTHER PTHR23073:SF37 116 434 7.2E-34 T 23-04-2016 RBRH_RS00030 59695a2e690472a87a71d9b81a648762 731 SUPERFAMILY SSF52540 476 709 2.65E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00030 59695a2e690472a87a71d9b81a648762 731 SMART SM00382 520 654 1.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS01525 581873a242f27c3192ab33d80d0bd225 201 Pfam PF08534 Redoxin 73 189 1.7E-21 T 23-04-2016 IPR013740 Redoxin GO:0016491 RBRH_RS01525 581873a242f27c3192ab33d80d0bd225 201 PANTHER PTHR10681:SF125 83 193 5.0E-21 T 23-04-2016 RBRH_RS01525 581873a242f27c3192ab33d80d0bd225 201 Gene3D G3DSA:3.40.30.10 28 201 1.2E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS01525 581873a242f27c3192ab33d80d0bd225 201 SUPERFAMILY SSF52833 28 193 4.5E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS01525 581873a242f27c3192ab33d80d0bd225 201 PANTHER PTHR10681 83 193 5.0E-21 T 23-04-2016 RBRH_RS01525 581873a242f27c3192ab33d80d0bd225 201 ProSitePatterns PS00194 Thioredoxin family active site. 92 110 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RBRH_RS06000 9b0aaa2f9ba4b76bd63c3d612dfdfd0f 208 PANTHER PTHR37298 1 208 1.0E-51 T 23-04-2016 RBRH_RS06000 9b0aaa2f9ba4b76bd63c3d612dfdfd0f 208 Pfam PF01865 Protein of unknown function DUF47 8 206 4.2E-29 T 23-04-2016 IPR018445 Putative phosphate transport regulator RBRH_RS06000 9b0aaa2f9ba4b76bd63c3d612dfdfd0f 208 SUPERFAMILY SSF109755 44 201 7.98E-7 T 23-04-2016 RBRH_RS06000 9b0aaa2f9ba4b76bd63c3d612dfdfd0f 208 Gene3D G3DSA:1.20.58.220 112 200 7.3E-4 T 23-04-2016 RBRH_RS11975 9ca1c5f0e4c611c50e0b74ec97136700 427 Pfam PF07690 Major Facilitator Superfamily 251 420 3.0E-9 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS11975 9ca1c5f0e4c611c50e0b74ec97136700 427 Pfam PF07690 Major Facilitator Superfamily 34 239 1.4E-10 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS11975 9ca1c5f0e4c611c50e0b74ec97136700 427 Gene3D G3DSA:1.20.1250.20 26 218 9.9E-11 T 23-04-2016 RBRH_RS11975 9ca1c5f0e4c611c50e0b74ec97136700 427 SUPERFAMILY SSF103473 13 426 1.96E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS11975 9ca1c5f0e4c611c50e0b74ec97136700 427 Gene3D G3DSA:1.20.1250.20 243 420 3.0E-15 T 23-04-2016 RBRH_RS11975 9ca1c5f0e4c611c50e0b74ec97136700 427 PANTHER PTHR12778 27 422 1.6E-78 T 23-04-2016 RBRH_RS02410 cb2febc0e50b87028b33c5a0df683d8b 254 Gene3D G3DSA:3.40.50.620 26 218 1.2E-47 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02410 cb2febc0e50b87028b33c5a0df683d8b 254 PANTHER PTHR23293 71 247 5.4E-64 T 23-04-2016 RBRH_RS02410 cb2febc0e50b87028b33c5a0df683d8b 254 SUPERFAMILY SSF52402 27 210 4.19E-41 T 23-04-2016 RBRH_RS02410 cb2febc0e50b87028b33c5a0df683d8b 254 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 51 222 4.4E-37 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RBRH_RS02410 cb2febc0e50b87028b33c5a0df683d8b 254 PIRSF PIRSF000857 11 252 1.1E-74 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RBRH_RS02410 cb2febc0e50b87028b33c5a0df683d8b 254 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 53 246 1.3E-84 T 23-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RBRH_RS02410 cb2febc0e50b87028b33c5a0df683d8b 254 PANTHER PTHR23293:SF11 71 247 5.4E-64 T 23-04-2016 RBRH_RS10850 1473a5e2e8f93a901382eeffd5d68acb 323 PANTHER PTHR41542 1 322 1.1E-30 T 23-04-2016 RBRH_RS10850 1473a5e2e8f93a901382eeffd5d68acb 323 Pfam PF04280 Tim44-like domain 199 321 3.9E-14 T 23-04-2016 IPR007379 Tim44-like domain RBRH_RS10850 1473a5e2e8f93a901382eeffd5d68acb 323 PANTHER PTHR41542:SF1 1 322 1.1E-30 T 23-04-2016 RBRH_RS10850 1473a5e2e8f93a901382eeffd5d68acb 323 SMART SM00978 190 321 3.0E-38 T 23-04-2016 IPR007379 Tim44-like domain RBRH_RS10850 1473a5e2e8f93a901382eeffd5d68acb 323 SUPERFAMILY SSF54427 198 322 1.81E-12 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 Pfam PF12857 TOBE-like domain 288 344 2.3E-15 T 23-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 SUPERFAMILY SSF50331 240 349 1.7E-12 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 SMART SM00382 27 214 5.2E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 PANTHER PTHR24220 4 250 5.8E-134 T 23-04-2016 RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 SUPERFAMILY SSF52540 3 243 3.46E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 Gene3D G3DSA:3.40.50.300 4 243 1.7E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 Pfam PF00005 ABC transporter 18 164 2.2E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 Gene3D G3DSA:2.40.50.100 293 347 5.8E-7 T 23-04-2016 RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 4.5E-119 T 23-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 RBRH_RS07590 1b9395dd80931f6514840578b157cc69 353 PANTHER PTHR24220:SF123 4 250 5.8E-134 T 23-04-2016 RBRH_RS16210 3f11ea9bf6aedce3cabf9a05aae8133b 184 PANTHER PTHR33452:SF6 87 173 7.8E-13 T 23-04-2016 RBRH_RS16210 3f11ea9bf6aedce3cabf9a05aae8133b 184 SUPERFAMILY SSF51182 9 94 3.6E-7 T 23-04-2016 IPR011051 RmlC-like cupin domain RBRH_RS16210 3f11ea9bf6aedce3cabf9a05aae8133b 184 Gene3D G3DSA:2.60.120.10 11 86 7.4E-7 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RBRH_RS16210 3f11ea9bf6aedce3cabf9a05aae8133b 184 Pfam PF07681 DoxX 87 135 1.3E-5 T 23-04-2016 IPR032808 DoxX family RBRH_RS16210 3f11ea9bf6aedce3cabf9a05aae8133b 184 PANTHER PTHR33452 87 173 7.8E-13 T 23-04-2016 RBRH_RS05095 6e829be0d1da377f6ad1a0ae55db8d31 156 PANTHER PTHR12418 26 142 1.1E-43 T 23-04-2016 RBRH_RS05095 6e829be0d1da377f6ad1a0ae55db8d31 156 Pfam PF03061 Thioesterase superfamily 65 135 9.4E-12 T 23-04-2016 IPR006683 Thioesterase domain RBRH_RS05095 6e829be0d1da377f6ad1a0ae55db8d31 156 Gene3D G3DSA:3.10.129.10 20 151 1.2E-46 T 23-04-2016 IPR029069 HotDog domain RBRH_RS05095 6e829be0d1da377f6ad1a0ae55db8d31 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 33 145 1.0E-24 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RBRH_RS05095 6e829be0d1da377f6ad1a0ae55db8d31 156 SUPERFAMILY SSF54637 23 143 2.82E-30 T 23-04-2016 IPR029069 HotDog domain RBRH_RS05095 6e829be0d1da377f6ad1a0ae55db8d31 156 PANTHER PTHR12418:SF24 26 142 1.1E-43 T 23-04-2016 RBRH_RS05095 6e829be0d1da377f6ad1a0ae55db8d31 156 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 36 146 6.8E-47 T 23-04-2016 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- RBRH_RS10645 de0ca5c82f750d1d74b0e75e6f108d7a 354 SUPERFAMILY SSF51395 11 324 1.39E-87 T 23-04-2016 RBRH_RS10645 de0ca5c82f750d1d74b0e75e6f108d7a 354 Gene3D G3DSA:1.10.1200.80 258 332 5.0E-26 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RBRH_RS10645 de0ca5c82f750d1d74b0e75e6f108d7a 354 Pfam PF01207 Dihydrouridine synthase (Dus) 15 325 1.5E-105 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RBRH_RS10645 de0ca5c82f750d1d74b0e75e6f108d7a 354 Gene3D G3DSA:3.20.20.70 9 251 5.8E-82 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS10645 de0ca5c82f750d1d74b0e75e6f108d7a 354 PIRSF PIRSF006621 3 333 2.2E-105 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RBRH_RS10645 de0ca5c82f750d1d74b0e75e6f108d7a 354 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 2 327 50.1 T 23-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 RBRH_RS10645 de0ca5c82f750d1d74b0e75e6f108d7a 354 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RBRH_RS10645 de0ca5c82f750d1d74b0e75e6f108d7a 354 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 325 4.1E-122 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 RBRH_RS10645 de0ca5c82f750d1d74b0e75e6f108d7a 354 PANTHER PTHR11082:SF25 4 332 2.5E-134 T 23-04-2016 RBRH_RS10645 de0ca5c82f750d1d74b0e75e6f108d7a 354 PANTHER PTHR11082 4 332 2.5E-134 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 Pfam PF13183 4Fe-4S dicluster domain 854 933 2.0E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 PANTHER PTHR11748 606 820 8.0E-33 T 23-04-2016 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 PANTHER PTHR11748 154 349 8.0E-33 T 23-04-2016 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 PANTHER PTHR11748 411 486 8.0E-33 T 23-04-2016 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 Pfam PF12447 Protein of unknown function (DUF3683) 23 147 2.0E-51 T 23-04-2016 IPR022153 Protein of unknown function DUF3683 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 Pfam PF02913 FAD linked oxidases, C-terminal domain 457 579 4.8E-6 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 Pfam PF02913 FAD linked oxidases, C-terminal domain 730 818 5.5E-18 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 SUPERFAMILY SSF55103 450 587 7.85E-14 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 SUPERFAMILY SSF56176 159 428 2.1E-54 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 Gene3D G3DSA:3.30.43.10 153 313 9.5E-33 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 SUPERFAMILY SSF55103 714 819 1.8E-26 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 Pfam PF01565 FAD binding domain 197 342 5.3E-24 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 Pfam PF02754 Cysteine-rich domain 1189 1255 0.0072 T 23-04-2016 IPR004017 Cysteine-rich domain RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 Pfam PF02754 Cysteine-rich domain 1064 1153 3.9E-7 T 23-04-2016 IPR004017 Cysteine-rich domain RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 SUPERFAMILY SSF46548 829 949 7.06E-14 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 919 930 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 Pfam PF11880 Domain of unknown function (DUF3400) 1313 1357 1.0E-25 T 23-04-2016 IPR021817 Protein of unknown function DUF3400 RBRH_RS10870 f7447d3f099e0bdcb748b17173894767 1357 Gene3D G3DSA:1.10.1060.10 850 952 1.6E-14 T 23-04-2016 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 2.5E-11 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 3.7E-46 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 SUPERFAMILY SSF81923 1 143 5.23E-58 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 SMART SM00382 209 353 2.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 SMART SM00382 490 639 2.5E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 Gene3D G3DSA:1.10.8.60 354 437 5.3E-30 T 23-04-2016 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 61 6.1E-15 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 SUPERFAMILY SSF52540 172 424 1.73E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 Gene3D G3DSA:3.40.50.300 173 353 1.4E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 2.9E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 2.9E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 2.9E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 2.9E-38 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 23-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 1.8E-21 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 SUPERFAMILY SSF52540 440 740 3.37E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 SMART SM01086 656 746 2.8E-31 T 23-04-2016 IPR019489 Clp ATPase, C-terminal RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 PANTHER PTHR11638 1 766 0.0 T 23-04-2016 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 Gene3D G3DSA:1.10.1780.10 1 143 4.6E-42 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 PANTHER PTHR11638:SF111 1 766 0.0 T 23-04-2016 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 Gene3D G3DSA:1.10.8.60 668 748 3.4E-27 T 23-04-2016 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RBRH_RS02235 b59198171ffd68acf4cd7a8937f2b9f8 766 Gene3D G3DSA:3.40.50.300 445 667 5.5E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03775 99f54c94a3fcb0821c7d413b8dec6ace 76 PANTHER PTHR33279 5 76 1.9E-20 T 23-04-2016 RBRH_RS03775 99f54c94a3fcb0821c7d413b8dec6ace 76 Gene3D G3DSA:3.30.110.40 1 75 1.6E-29 T 23-04-2016 IPR001455 TusA-like domain RBRH_RS03775 99f54c94a3fcb0821c7d413b8dec6ace 76 SUPERFAMILY SSF64307 2 75 1.96E-24 T 23-04-2016 IPR001455 TusA-like domain RBRH_RS03775 99f54c94a3fcb0821c7d413b8dec6ace 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 23-04-2016 IPR001455 TusA-like domain RBRH_RS03775 99f54c94a3fcb0821c7d413b8dec6ace 76 Pfam PF01206 Sulfurtransferase TusA 5 75 9.4E-23 T 23-04-2016 IPR001455 TusA-like domain RBRH_RS03605 e8c757b3bc57337b19d16b7cdb2f974a 195 PANTHER PTHR31846 4 90 8.9E-23 T 23-04-2016 RBRH_RS03605 e8c757b3bc57337b19d16b7cdb2f974a 195 Pfam PF01985 CRS1 / YhbY (CRM) domain 6 89 6.7E-18 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RBRH_RS03605 e8c757b3bc57337b19d16b7cdb2f974a 195 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 14 91 1.0E-34 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RBRH_RS03605 e8c757b3bc57337b19d16b7cdb2f974a 195 SMART SM01103 6 89 8.3E-41 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RBRH_RS03605 e8c757b3bc57337b19d16b7cdb2f974a 195 Gene3D G3DSA:3.30.110.60 5 96 2.2E-29 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RBRH_RS03605 e8c757b3bc57337b19d16b7cdb2f974a 195 SUPERFAMILY SSF75471 5 93 3.92E-27 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RBRH_RS10175 9686ff17fb2ed13f52e752460390e397 384 Pfam PF02222 ATP-grasp domain 110 283 1.6E-44 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 RBRH_RS10175 9686ff17fb2ed13f52e752460390e397 384 SUPERFAMILY SSF51246 306 379 3.3E-17 T 23-04-2016 IPR011054 Rudiment single hybrid motif RBRH_RS10175 9686ff17fb2ed13f52e752460390e397 384 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 5 365 39.867 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RBRH_RS10175 9686ff17fb2ed13f52e752460390e397 384 Gene3D G3DSA:3.30.470.20 144 381 5.7E-83 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RBRH_RS10175 9686ff17fb2ed13f52e752460390e397 384 SUPERFAMILY SSF52440 6 98 7.34E-24 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS10175 9686ff17fb2ed13f52e752460390e397 384 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 6 368 2.5E-108 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RBRH_RS10175 9686ff17fb2ed13f52e752460390e397 384 Gene3D G3DSA:3.40.50.20 1 109 1.7E-33 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS10175 9686ff17fb2ed13f52e752460390e397 384 PANTHER PTHR11609 1 369 1.5E-122 T 23-04-2016 RBRH_RS10175 9686ff17fb2ed13f52e752460390e397 384 SUPERFAMILY SSF56059 101 301 6.51E-55 T 23-04-2016 RBRH_RS10175 9686ff17fb2ed13f52e752460390e397 384 PANTHER PTHR11609:SF5 1 369 1.5E-122 T 23-04-2016 RBRH_RS11715 7398a1ce09a096293c352486f7b688b9 219 SUPERFAMILY SSF50475 10 213 7.27E-37 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RBRH_RS11715 7398a1ce09a096293c352486f7b688b9 219 PANTHER PTHR13343 11 146 1.6E-19 T 23-04-2016 RBRH_RS11715 7398a1ce09a096293c352486f7b688b9 219 PANTHER PTHR13343:SF4 11 146 1.6E-19 T 23-04-2016 RBRH_RS11715 7398a1ce09a096293c352486f7b688b9 219 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 10 146 1.3E-10 T 23-04-2016 RBRH_RS11715 7398a1ce09a096293c352486f7b688b9 219 Gene3D G3DSA:2.30.110.10 10 146 6.1E-47 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RBRH_RS10445 e251531f7151d5a5462498caded5aa06 563 Gene3D G3DSA:3.60.110.10 267 518 1.1E-22 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RBRH_RS10445 e251531f7151d5a5462498caded5aa06 563 Pfam PF00795 Carbon-nitrogen hydrolase 288 522 3.1E-24 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RBRH_RS10445 e251531f7151d5a5462498caded5aa06 563 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 101 504 6.4E-101 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RBRH_RS10445 e251531f7151d5a5462498caded5aa06 563 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 46 542 21.472 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RBRH_RS10445 e251531f7151d5a5462498caded5aa06 563 SUPERFAMILY SSF56317 268 530 5.49E-35 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RBRH_RS10445 e251531f7151d5a5462498caded5aa06 563 PANTHER PTHR38686 38 561 5.7E-83 T 23-04-2016 RBRH_RS05055 a56d3292658fda912ac9d5be061c8eb9 343 SUPERFAMILY SSF52418 78 340 5.89E-97 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RBRH_RS05055 a56d3292658fda912ac9d5be061c8eb9 343 PANTHER PTHR11922 1 340 1.2E-107 T 23-04-2016 RBRH_RS05055 a56d3292658fda912ac9d5be061c8eb9 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 6.9E-12 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RBRH_RS05055 a56d3292658fda912ac9d5be061c8eb9 343 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 36.922 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RBRH_RS05055 a56d3292658fda912ac9d5be061c8eb9 343 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 1.1E-91 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RBRH_RS05055 a56d3292658fda912ac9d5be061c8eb9 343 PANTHER PTHR11922:SF5 1 340 1.2E-107 T 23-04-2016 RBRH_RS05055 a56d3292658fda912ac9d5be061c8eb9 343 Gene3D G3DSA:3.40.1030.10 76 340 4.0E-106 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RBRH_RS05055 a56d3292658fda912ac9d5be061c8eb9 343 Gene3D G3DSA:1.20.970.10 6 71 1.4E-25 T 23-04-2016 RBRH_RS05055 a56d3292658fda912ac9d5be061c8eb9 343 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 336 1.4E-123 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RBRH_RS05055 a56d3292658fda912ac9d5be061c8eb9 343 SUPERFAMILY SSF47648 4 71 1.57E-16 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 PANTHER PTHR11712 4064 4071 2.4E-200 T 23-04-2016 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 PANTHER PTHR11712 1933 2032 2.4E-200 T 23-04-2016 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF14765 Polyketide synthase dehydratase 2287 2576 1.7E-49 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF14765 Polyketide synthase dehydratase 58 311 2.0E-32 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SUPERFAMILY SSF47336 4179 4250 3.14E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SUPERFAMILY SSF51735 1284 1533 8.0E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF00550 Phosphopantetheine attachment site 4184 4248 2.5E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF00550 Phosphopantetheine attachment site 3052 3114 3.9E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF00550 Phosphopantetheine attachment site 1572 1636 1.9E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF00550 Phosphopantetheine attachment site 354 400 2.4E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM00823 Phosphopantetheine attachment site 333 404 2.1E-6 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM00823 Phosphopantetheine attachment site 1568 1640 5.1E-5 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM00823 Phosphopantetheine attachment site 3049 3119 7.9E-9 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM00823 Phosphopantetheine attachment site 4181 4241 0.0056 T 23-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SUPERFAMILY SSF53901 3222 3590 3.07E-73 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1827 1843 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM01294 4182 4248 2.2E-4 T 23-04-2016 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SUPERFAMILY SSF47336 1570 1688 2.09E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 719 835 1.4E-38 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3481 3597 6.2E-36 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1922 2037 1.8E-37 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SUPERFAMILY SSF47336 3047 3122 6.02E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF08659 KR domain 2776 2960 4.0E-53 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF08659 KR domain 1284 1467 6.7E-39 T 23-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 PANTHER PTHR11712:SF284 4064 4071 2.4E-200 T 23-04-2016 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SUPERFAMILY SSF53901 1670 2029 7.74E-88 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2041 2154 4.9E-12 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 839 948 4.1E-16 T 23-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 623 639 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 PANTHER PTHR11712:SF284 1933 2032 2.4E-200 T 23-04-2016 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:1.10.1200.10 4179 4250 2.2E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:1.10.1200.10 340 403 4.6E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:1.10.1200.10 3046 3118 1.5E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 PANTHER PTHR11712 2134 3115 2.4E-200 T 23-04-2016 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SUPERFAMILY SSF51735 2772 3007 6.15E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM00825 Beta-ketoacyl synthase 3224 3660 9.7E-134 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM00825 Beta-ketoacyl synthase 1675 2092 9.3E-166 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM00825 Beta-ketoacyl synthase 466 888 1.5E-178 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1283 1469 2.9E-25 T 23-04-2016 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2776 2961 2.5E-42 T 23-04-2016 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:3.40.47.10 723 890 2.6E-57 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:3.40.47.10 3486 3661 8.4E-49 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:3.40.47.10 1927 2092 5.0E-52 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 PANTHER PTHR11712:SF284 354 1128 2.4E-200 T 23-04-2016 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 PANTHER PTHR11712:SF284 2134 3115 2.4E-200 T 23-04-2016 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SUPERFAMILY SSF53901 462 828 3.64E-83 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 464 710 1.6E-77 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1673 1914 3.5E-75 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3223 3473 6.0E-64 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:1.10.1200.10 1572 1681 7.1E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:3.40.47.10 1682 1926 1.8E-84 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4207 4222 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:3.40.50.720 1284 1505 3.5E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:3.40.50.720 2774 2997 1.8E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:3.40.47.10 3222 3485 3.9E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 Gene3D G3DSA:3.40.47.10 462 722 5.4E-86 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SMART SM00826 2287 2454 2.7E-22 T 23-04-2016 IPR020807 Polyketide synthase, dehydratase domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 SUPERFAMILY SSF47336 328 405 2.88E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 ProSitePatterns PS00012 Phosphopantetheine attachment site. 359 374 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site RBRH_RS07320 69809100a488cd3b7019ac4d8c061ee5 4251 PANTHER PTHR11712 354 1128 2.4E-200 T 23-04-2016 RBRH_RS08395 7234680912b98a96d4256236232a747f 259 PANTHER PTHR22748:SF7 1 259 2.9E-106 T 23-04-2016 RBRH_RS08395 7234680912b98a96d4256236232a747f 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 250 2.2E-24 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RBRH_RS08395 7234680912b98a96d4256236232a747f 259 SUPERFAMILY SSF56219 1 258 5.23E-79 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RBRH_RS08395 7234680912b98a96d4256236232a747f 259 Gene3D G3DSA:3.60.10.10 1 258 1.7E-85 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RBRH_RS08395 7234680912b98a96d4256236232a747f 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 257 3.0E-79 T 23-04-2016 RBRH_RS08395 7234680912b98a96d4256236232a747f 259 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 214 225 - T 23-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RBRH_RS08395 7234680912b98a96d4256236232a747f 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 257 1.0E-76 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RBRH_RS08395 7234680912b98a96d4256236232a747f 259 PANTHER PTHR22748 1 259 2.9E-106 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RBRH_RS03280 91cc7289d63cfea234324a8afd67d34f 338 Gene3D G3DSA:3.90.226.10 67 189 2.3E-45 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS03280 91cc7289d63cfea234324a8afd67d34f 338 Gene3D G3DSA:3.90.226.10 227 313 2.3E-45 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS03280 91cc7289d63cfea234324a8afd67d34f 338 SUPERFAMILY SSF52096 226 287 7.02E-41 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS03280 91cc7289d63cfea234324a8afd67d34f 338 SUPERFAMILY SSF52096 71 197 7.02E-41 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS03280 91cc7289d63cfea234324a8afd67d34f 338 PANTHER PTHR30341 32 322 4.1E-84 T 23-04-2016 RBRH_RS03280 91cc7289d63cfea234324a8afd67d34f 338 PANTHER PTHR30341:SF1 32 322 4.1E-84 T 23-04-2016 RBRH_RS03280 91cc7289d63cfea234324a8afd67d34f 338 Pfam PF01343 Peptidase family S49 153 294 3.2E-34 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RBRH_RS11150 f747d41c92638dc08883b690a20d752e 538 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 505 2.1E-177 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 RBRH_RS11150 f747d41c92638dc08883b690a20d752e 538 PANTHER PTHR30365:SF0 1 312 8.9E-251 T 23-04-2016 RBRH_RS11150 f747d41c92638dc08883b690a20d752e 538 PANTHER PTHR30365:SF0 378 524 8.9E-251 T 23-04-2016 RBRH_RS11150 f747d41c92638dc08883b690a20d752e 538 PANTHER PTHR30365 1 312 8.9E-251 T 23-04-2016 RBRH_RS11150 f747d41c92638dc08883b690a20d752e 538 PANTHER PTHR30365 378 524 8.9E-251 T 23-04-2016 RBRH_RS10705 1d05a08c6b41b0f9b47ffa67a7b5f337 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.485 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RBRH_RS10705 1d05a08c6b41b0f9b47ffa67a7b5f337 142 Gene3D G3DSA:3.90.1180.10 3 141 2.8E-64 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RBRH_RS10705 1d05a08c6b41b0f9b47ffa67a7b5f337 142 Pfam PF00572 Ribosomal protein L13 14 138 4.5E-55 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RBRH_RS10705 1d05a08c6b41b0f9b47ffa67a7b5f337 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 2.9E-62 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 RBRH_RS10705 1d05a08c6b41b0f9b47ffa67a7b5f337 142 PIRSF PIRSF002181 1 142 3.0E-48 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RBRH_RS10705 1d05a08c6b41b0f9b47ffa67a7b5f337 142 PANTHER PTHR11545 1 142 2.4E-73 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RBRH_RS10705 1d05a08c6b41b0f9b47ffa67a7b5f337 142 SUPERFAMILY SSF52161 1 139 7.85E-60 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 SUPERFAMILY SSF53244 331 461 1.49E-33 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 PANTHER PTHR23135 13 461 3.7E-134 T 23-04-2016 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 Pfam PF02875 Mur ligase family, glutamate ligase domain 335 405 1.4E-12 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 462 31.782 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 Gene3D G3DSA:3.40.1390.10 1 82 1.3E-21 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 SUPERFAMILY SSF63418 1 100 3.53E-23 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 Pfam PF08245 Mur ligase middle domain 108 299 1.1E-38 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 Pfam PF01225 Mur ligase family, catalytic domain 28 98 1.8E-10 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 Gene3D G3DSA:3.90.190.20 319 462 2.4E-42 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 PANTHER PTHR23135:SF3 13 461 3.7E-134 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 Gene3D G3DSA:3.40.1190.10 85 317 6.7E-62 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 461 1.1E-120 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS01270 7b78ef70ed316cabec39900e26bd5272 476 SUPERFAMILY SSF53623 103 318 3.53E-49 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RBRH_RS01385 b6c0b038e4787bb2dac661c7ef5fe59e 438 PANTHER PTHR22777 1 421 2.0E-109 T 23-04-2016 RBRH_RS01385 b6c0b038e4787bb2dac661c7ef5fe59e 438 Gene3D G3DSA:3.10.580.10 197 319 1.4E-17 T 23-04-2016 RBRH_RS01385 b6c0b038e4787bb2dac661c7ef5fe59e 438 SUPERFAMILY SSF54631 196 331 1.7E-26 T 23-04-2016 RBRH_RS01385 b6c0b038e4787bb2dac661c7ef5fe59e 438 SMART SM01091 345 423 1.6E-16 T 23-04-2016 IPR005170 Transporter-associated domain RBRH_RS01385 b6c0b038e4787bb2dac661c7ef5fe59e 438 Pfam PF00571 CBS domain 277 327 2.2E-6 T 23-04-2016 IPR000644 CBS domain RBRH_RS01385 b6c0b038e4787bb2dac661c7ef5fe59e 438 SUPERFAMILY SSF56176 349 424 1.58E-16 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS01385 b6c0b038e4787bb2dac661c7ef5fe59e 438 Pfam PF01595 Domain of unknown function DUF21 13 185 3.0E-46 T 23-04-2016 IPR002550 Domain of unknown function DUF21 RBRH_RS01385 b6c0b038e4787bb2dac661c7ef5fe59e 438 Pfam PF03471 Transporter associated domain 349 420 3.0E-15 T 23-04-2016 IPR005170 Transporter-associated domain RBRH_RS01385 b6c0b038e4787bb2dac661c7ef5fe59e 438 Gene3D G3DSA:3.30.465.10 320 421 1.6E-19 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RBRH_RS06990 1acc7fad2c0808ec1a2c9b5364391f19 217 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 14 209 2.0E-46 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RBRH_RS06990 1acc7fad2c0808ec1a2c9b5364391f19 217 Hamap MF_00165 Thymidylate kinase [tmk]. 16 217 27.441 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RBRH_RS06990 1acc7fad2c0808ec1a2c9b5364391f19 217 Gene3D G3DSA:3.40.50.300 14 214 7.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06990 1acc7fad2c0808ec1a2c9b5364391f19 217 Pfam PF02223 Thymidylate kinase 20 209 1.5E-42 T 23-04-2016 RBRH_RS06990 1acc7fad2c0808ec1a2c9b5364391f19 217 PANTHER PTHR10344 14 215 2.4E-55 T 23-04-2016 RBRH_RS06990 1acc7fad2c0808ec1a2c9b5364391f19 217 SUPERFAMILY SSF52540 13 215 5.08E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04935 309da4305fe8343a9f6023d83467740d 67 SUPERFAMILY SSF50249 1 65 1.63E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04935 309da4305fe8343a9f6023d83467740d 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 6.6E-30 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS04935 309da4305fe8343a9f6023d83467740d 67 PANTHER PTHR11544 1 67 3.8E-36 T 23-04-2016 RBRH_RS04935 309da4305fe8343a9f6023d83467740d 67 SMART SM00357 3 67 1.0E-30 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 RBRH_RS04935 309da4305fe8343a9f6023d83467740d 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site RBRH_RS04935 309da4305fe8343a9f6023d83467740d 67 Gene3D G3DSA:2.40.50.140 1 65 1.7E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04935 309da4305fe8343a9f6023d83467740d 67 PIRSF PIRSF002599 1 67 2.5E-24 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 RBRH_RS04935 309da4305fe8343a9f6023d83467740d 67 PRINTS PR00050 Cold shock protein signature 25 34 6.8E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS04935 309da4305fe8343a9f6023d83467740d 67 PRINTS PR00050 Cold shock protein signature 40 58 6.8E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS04935 309da4305fe8343a9f6023d83467740d 67 PRINTS PR00050 Cold shock protein signature 4 19 6.8E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RBRH_RS00400 8eb069b229d489a427087c4cf948caf4 149 PANTHER PTHR11407 1 77 2.7E-16 T 23-04-2016 RBRH_RS00400 8eb069b229d489a427087c4cf948caf4 149 Gene3D G3DSA:1.10.530.10 25 125 1.3E-22 T 23-04-2016 RBRH_RS00400 8eb069b229d489a427087c4cf948caf4 149 Pfam PF01464 Transglycosylase SLT domain 27 127 1.1E-19 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RBRH_RS00400 8eb069b229d489a427087c4cf948caf4 149 PANTHER PTHR11407:SF34 1 77 2.7E-16 T 23-04-2016 RBRH_RS00400 8eb069b229d489a427087c4cf948caf4 149 SUPERFAMILY SSF53955 22 144 3.67E-40 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS10745 5ae8a6ed385359a9ec55e9efdb797893 297 Gene3D G3DSA:3.40.190.10 33 121 1.3E-30 T 23-04-2016 RBRH_RS10745 5ae8a6ed385359a9ec55e9efdb797893 297 Gene3D G3DSA:3.40.190.10 229 270 1.3E-30 T 23-04-2016 RBRH_RS10745 5ae8a6ed385359a9ec55e9efdb797893 297 Gene3D G3DSA:3.40.190.10 122 228 2.2E-32 T 23-04-2016 RBRH_RS10745 5ae8a6ed385359a9ec55e9efdb797893 297 SUPERFAMILY SSF53850 5 269 1.67E-66 T 23-04-2016 RBRH_RS10745 5ae8a6ed385359a9ec55e9efdb797893 297 PANTHER PTHR30085 3 295 2.1E-133 T 23-04-2016 RBRH_RS10745 5ae8a6ed385359a9ec55e9efdb797893 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 266 8.3E-51 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RBRH_RS10745 5ae8a6ed385359a9ec55e9efdb797893 297 PANTHER PTHR30085:SF2 3 295 2.1E-133 T 23-04-2016 RBRH_RS10745 5ae8a6ed385359a9ec55e9efdb797893 297 SMART SM00062 36 268 3.3E-67 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RBRH_RS05005 51ba7a2742164a57ca4940607bf3a77c 630 Pfam PF00664 ABC transporter transmembrane region 34 310 8.4E-14 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS05005 51ba7a2742164a57ca4940607bf3a77c 630 PANTHER PTHR24221 29 603 9.5E-183 T 23-04-2016 RBRH_RS05005 51ba7a2742164a57ca4940607bf3a77c 630 Pfam PF00005 ABC transporter 375 523 2.7E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS05005 51ba7a2742164a57ca4940607bf3a77c 630 SMART SM00382 383 569 5.7E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05005 51ba7a2742164a57ca4940607bf3a77c 630 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS05005 51ba7a2742164a57ca4940607bf3a77c 630 Gene3D G3DSA:3.40.50.300 357 587 4.8E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05005 51ba7a2742164a57ca4940607bf3a77c 630 SUPERFAMILY SSF52540 350 594 1.55E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05005 51ba7a2742164a57ca4940607bf3a77c 630 SUPERFAMILY SSF90123 22 331 1.57E-42 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS05005 51ba7a2742164a57ca4940607bf3a77c 630 Gene3D G3DSA:1.20.1560.10 22 338 7.4E-35 T 23-04-2016 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 SUPERFAMILY SSF54534 101 253 8.05E-28 T 23-04-2016 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 TIGRFAM TIGR00115 tig: trigger factor 11 427 6.0E-128 T 23-04-2016 IPR005215 Trigger factor GO:0015031 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 Gene3D G3DSA:3.30.70.1050 1 119 2.3E-33 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 PANTHER PTHR30560:SF3 5 445 1.3E-103 T 23-04-2016 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 PANTHER PTHR30560 5 445 1.3E-103 T 23-04-2016 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 Gene3D G3DSA:1.10.3120.10 225 404 4.7E-59 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 PIRSF PIRSF003095 1 449 9.1E-126 T 23-04-2016 IPR005215 Trigger factor GO:0015031 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 168 247 7.8E-14 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 Hamap MF_00303 Trigger factor [tig]. 1 433 20.899 T 23-04-2016 IPR005215 Trigger factor GO:0015031 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 Gene3D G3DSA:3.10.50.40 166 224 8.6E-9 T 23-04-2016 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 SUPERFAMILY SSF109998 260 444 1.96E-48 T 23-04-2016 IPR027304 Trigger factor/SurA domain RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 275 427 4.5E-36 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 Pfam PF05697 Bacterial trigger factor protein (TF) 4 143 1.8E-36 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RBRH_RS07155 852e14b2e421e128dc259119c44413a8 451 SUPERFAMILY SSF102735 1 130 4.45E-33 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RBRH_RS00780 25f97dd8d9c27ca8d139d814d1c62acb 409 Gene3D G3DSA:3.80.10.10 48 110 3.1E-4 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RBRH_RS02315 233896dec2e3159346ad27c8b7aaa988 239 SUPERFAMILY SSF47781 30 102 3.3E-11 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RBRH_RS02315 233896dec2e3159346ad27c8b7aaa988 239 PANTHER PTHR30471 13 239 7.4E-94 T 23-04-2016 RBRH_RS02315 233896dec2e3159346ad27c8b7aaa988 239 Gene3D G3DSA:3.40.140.10 116 239 4.0E-44 T 23-04-2016 RBRH_RS02315 233896dec2e3159346ad27c8b7aaa988 239 SUPERFAMILY SSF102712 159 207 8.63E-6 T 23-04-2016 RBRH_RS02315 233896dec2e3159346ad27c8b7aaa988 239 PANTHER PTHR30471:SF5 13 239 7.4E-94 T 23-04-2016 RBRH_RS02315 233896dec2e3159346ad27c8b7aaa988 239 Gene3D G3DSA:1.10.150.20 63 97 2.1E-7 T 23-04-2016 RBRH_RS02315 233896dec2e3159346ad27c8b7aaa988 239 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 239 1.5E-68 T 23-04-2016 IPR001405 RadC protein RBRH_RS02315 233896dec2e3159346ad27c8b7aaa988 239 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 188 193 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site RBRH_RS02315 233896dec2e3159346ad27c8b7aaa988 239 Pfam PF04002 RadC-like JAB domain 119 237 1.4E-40 T 23-04-2016 IPR025657 RadC-like JAB domain RBRH_RS06450 6d366a7d833cc7388252e8b300f4bb94 237 PIRSF PIRSF005650 1 237 2.7E-92 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RBRH_RS06450 6d366a7d833cc7388252e8b300f4bb94 237 SUPERFAMILY SSF53633 3 236 1.44E-72 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS06450 6d366a7d833cc7388252e8b300f4bb94 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 236 2.7E-100 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RBRH_RS06450 6d366a7d833cc7388252e8b300f4bb94 237 Pfam PF00696 Amino acid kinase family 6 215 7.1E-29 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS06450 6d366a7d833cc7388252e8b300f4bb94 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 236 44.489 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RBRH_RS06450 6d366a7d833cc7388252e8b300f4bb94 237 PANTHER PTHR21499 5 235 1.2E-110 T 23-04-2016 RBRH_RS06450 6d366a7d833cc7388252e8b300f4bb94 237 Gene3D G3DSA:3.40.1160.10 3 236 1.2E-86 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS06450 6d366a7d833cc7388252e8b300f4bb94 237 PANTHER PTHR21499:SF23 5 235 1.2E-110 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RBRH_RS05215 c36b2daba3c16518932daea8f507deda 481 PANTHER PTHR11748:SF76 10 477 2.1E-181 T 23-04-2016 RBRH_RS05215 c36b2daba3c16518932daea8f507deda 481 SUPERFAMILY SSF55103 228 477 4.41E-55 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RBRH_RS05215 c36b2daba3c16518932daea8f507deda 481 SUPERFAMILY SSF56176 11 225 1.74E-70 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS05215 c36b2daba3c16518932daea8f507deda 481 PANTHER PTHR11748 10 477 2.1E-181 T 23-04-2016 RBRH_RS05215 c36b2daba3c16518932daea8f507deda 481 Pfam PF02913 FAD linked oxidases, C-terminal domain 225 476 5.5E-51 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RBRH_RS05215 c36b2daba3c16518932daea8f507deda 481 Gene3D G3DSA:1.10.45.10 437 476 2.1E-12 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RBRH_RS05215 c36b2daba3c16518932daea8f507deda 481 Gene3D G3DSA:3.30.43.10 8 104 5.9E-22 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RBRH_RS05215 c36b2daba3c16518932daea8f507deda 481 Pfam PF01565 FAD binding domain 49 185 3.4E-32 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RBRH_RS05215 c36b2daba3c16518932daea8f507deda 481 Gene3D G3DSA:3.30.465.10 105 225 1.3E-34 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RBRH_RS16120 cb456b4a310ee977c63bf41171173161 65 SUPERFAMILY SSF56300 7 60 3.21E-6 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RBRH_RS10995 a58df5a7758fb743b042a76cd26d5ef4 176 PIRSF PIRSF006118 1 173 1.3E-65 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RBRH_RS10995 a58df5a7758fb743b042a76cd26d5ef4 176 SUPERFAMILY SSF56784 8 167 1.78E-36 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS10995 a58df5a7758fb743b042a76cd26d5ef4 176 Gene3D G3DSA:3.40.50.1000 4 164 4.3E-39 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS10995 a58df5a7758fb743b042a76cd26d5ef4 176 PANTHER PTHR21485 6 168 2.7E-45 T 23-04-2016 RBRH_RS10995 a58df5a7758fb743b042a76cd26d5ef4 176 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 12 164 5.5E-48 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RBRH_RS03725 3e6cd920caebda78c96cb4a607f8a650 295 PANTHER PTHR32322:SF9 3 294 1.0E-84 T 23-04-2016 RBRH_RS03725 3e6cd920caebda78c96cb4a607f8a650 295 Pfam PF00892 EamA-like transporter family 6 130 6.8E-11 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RBRH_RS03725 3e6cd920caebda78c96cb4a607f8a650 295 Pfam PF00892 EamA-like transporter family 142 280 1.8E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RBRH_RS03725 3e6cd920caebda78c96cb4a607f8a650 295 SUPERFAMILY SSF103481 40 135 7.45E-10 T 23-04-2016 RBRH_RS03725 3e6cd920caebda78c96cb4a607f8a650 295 SUPERFAMILY SSF103481 186 284 1.31E-9 T 23-04-2016 RBRH_RS03725 3e6cd920caebda78c96cb4a607f8a650 295 PANTHER PTHR32322 3 294 1.0E-84 T 23-04-2016 RBRH_RS00450 2b03c232e25acace3db29a762161a3d4 228 SMART SM00448 1 112 5.8E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS00450 2b03c232e25acace3db29a762161a3d4 228 Gene3D G3DSA:1.10.10.10 128 222 6.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS00450 2b03c232e25acace3db29a762161a3d4 228 PANTHER PTHR26402:SF518 1 223 2.3E-75 T 23-04-2016 RBRH_RS00450 2b03c232e25acace3db29a762161a3d4 228 PANTHER PTHR26402 1 223 2.3E-75 T 23-04-2016 RBRH_RS00450 2b03c232e25acace3db29a762161a3d4 228 Gene3D G3DSA:3.40.50.2300 1 123 3.2E-37 T 23-04-2016 RBRH_RS00450 2b03c232e25acace3db29a762161a3d4 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 1.3E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS00450 2b03c232e25acace3db29a762161a3d4 228 SUPERFAMILY SSF46894 124 221 2.24E-22 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RBRH_RS00450 2b03c232e25acace3db29a762161a3d4 228 SUPERFAMILY SSF52172 1 123 3.13E-37 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS00450 2b03c232e25acace3db29a762161a3d4 228 SMART SM00862 148 221 4.9E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS00450 2b03c232e25acace3db29a762161a3d4 228 Pfam PF00072 Response regulator receiver domain 4 113 2.8E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 PANTHER PTHR30204 1 127 1.7E-57 T 23-04-2016 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 8.1E-56 T 23-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 Pfam PF00376 MerR family regulatory protein 2 39 2.1E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 SMART SM00422 1 70 2.3E-30 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.1E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.1E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.1E-11 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 PANTHER PTHR30204:SF16 1 127 1.7E-57 T 23-04-2016 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 SUPERFAMILY SSF46955 1 126 1.76E-38 T 23-04-2016 IPR009061 Putative DNA-binding domain RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 Gene3D G3DSA:1.10.1660.10 1 55 5.2E-25 T 23-04-2016 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 Gene3D G3DSA:1.10.1660.10 56 127 5.7E-30 T 23-04-2016 RBRH_RS05465 7f7d4d849adfd77d38c3bbed5e21dc2c 130 Pfam PF09278 MerR, DNA binding 44 108 1.1E-20 T 23-04-2016 IPR015358 Transcription regulator MerR, DNA binding RBRH_RS02265 3235c4c0169db0b2e1bb38b3796f9fda 370 PANTHER PTHR22749 10 323 3.3E-111 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 RBRH_RS02265 3235c4c0169db0b2e1bb38b3796f9fda 370 SUPERFAMILY SSF82114 190 325 3.49E-39 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RBRH_RS02265 3235c4c0169db0b2e1bb38b3796f9fda 370 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 33 323 1.7E-81 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RBRH_RS02265 3235c4c0169db0b2e1bb38b3796f9fda 370 SUPERFAMILY SSF52374 31 191 2.76E-33 T 23-04-2016 RBRH_RS02265 3235c4c0169db0b2e1bb38b3796f9fda 370 SMART SM00904 199 324 1.1E-52 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RBRH_RS02265 3235c4c0169db0b2e1bb38b3796f9fda 370 Gene3D G3DSA:3.40.50.620 26 202 4.3E-62 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02265 3235c4c0169db0b2e1bb38b3796f9fda 370 Pfam PF01687 Riboflavin kinase 200 323 4.9E-34 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RBRH_RS02265 3235c4c0169db0b2e1bb38b3796f9fda 370 Gene3D G3DSA:2.40.30.30 205 326 5.5E-37 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 RBRH_RS02265 3235c4c0169db0b2e1bb38b3796f9fda 370 PANTHER PTHR22749:SF0 10 323 3.3E-111 T 23-04-2016 RBRH_RS02265 3235c4c0169db0b2e1bb38b3796f9fda 370 Pfam PF06574 FAD synthetase 27 182 1.2E-52 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RBRH_RS04835 016e66b31f0464c03bdfb2658ba2a9d5 206 PANTHER PTHR10134 1 203 1.7E-61 T 23-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 RBRH_RS04835 016e66b31f0464c03bdfb2658ba2a9d5 206 Pfam PF00355 Rieske [2Fe-2S] domain 59 186 3.7E-10 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RBRH_RS04835 016e66b31f0464c03bdfb2658ba2a9d5 206 SUPERFAMILY SSF50022 33 198 1.61E-39 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RBRH_RS04835 016e66b31f0464c03bdfb2658ba2a9d5 206 Gene3D G3DSA:2.102.10.10 9 203 1.1E-41 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RBRH_RS04835 016e66b31f0464c03bdfb2658ba2a9d5 206 PANTHER PTHR10134:SF8 1 203 1.7E-61 T 23-04-2016 RBRH_RS04835 016e66b31f0464c03bdfb2658ba2a9d5 206 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 12 199 3.9E-59 T 23-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RBRH_RS04835 016e66b31f0464c03bdfb2658ba2a9d5 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 4.6E-8 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RBRH_RS04835 016e66b31f0464c03bdfb2658ba2a9d5 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 171 183 4.6E-8 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RBRH_RS04835 016e66b31f0464c03bdfb2658ba2a9d5 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 158 170 4.6E-8 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RBRH_RS02830 5439f12347f021f46cbc6abb2e91fe67 445 Gene3D G3DSA:2.30.40.10 361 433 2.5E-7 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS02830 5439f12347f021f46cbc6abb2e91fe67 445 SUPERFAMILY SSF51338 374 437 2.47E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS02830 5439f12347f021f46cbc6abb2e91fe67 445 SUPERFAMILY SSF51338 32 73 2.47E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS02830 5439f12347f021f46cbc6abb2e91fe67 445 SUPERFAMILY SSF51556 72 374 5.21E-88 T 23-04-2016 IPR032466 Metal-dependent hydrolase RBRH_RS02830 5439f12347f021f46cbc6abb2e91fe67 445 Gene3D G3DSA:3.20.20.140 82 360 2.7E-103 T 23-04-2016 RBRH_RS02830 5439f12347f021f46cbc6abb2e91fe67 445 PANTHER PTHR11271:SF6 30 434 2.7E-128 T 23-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 RBRH_RS02830 5439f12347f021f46cbc6abb2e91fe67 445 Pfam PF01979 Amidohydrolase family 70 431 1.5E-58 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RBRH_RS02830 5439f12347f021f46cbc6abb2e91fe67 445 Gene3D G3DSA:2.30.40.10 32 81 1.8E-8 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS02830 5439f12347f021f46cbc6abb2e91fe67 445 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 30 428 8.7E-171 T 23-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 RBRH_RS02830 5439f12347f021f46cbc6abb2e91fe67 445 PANTHER PTHR11271 30 434 2.7E-128 T 23-04-2016 RBRH_RS07780 46a0185320facfbf65ae8b2d2f9ecee2 310 Pfam PF11790 Glycosyl hydrolase catalytic core 190 248 1.1E-4 T 23-04-2016 IPR024655 Uncharacterised protein family, glycosyl hydrolase catalytic domain RBRH_RS07780 46a0185320facfbf65ae8b2d2f9ecee2 310 SUPERFAMILY SSF51445 12 307 7.28E-26 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily RBRH_RS07780 46a0185320facfbf65ae8b2d2f9ecee2 310 Gene3D G3DSA:3.20.20.80 15 304 5.2E-17 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 PANTHER PTHR10192:SF11 105 484 5.2E-140 T 23-04-2016 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 SUPERFAMILY SSF63882 102 278 6.67E-48 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 SUPERFAMILY SSF53218 279 432 1.24E-41 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 Pfam PF03454 MoeA C-terminal region (domain IV) 442 484 9.2E-6 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 Gene3D G3DSA:3.40.980.10 265 439 4.8E-58 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 Gene3D G3DSA:2.40.340.10 440 484 3.1E-14 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 Gene3D G3DSA:2.170.190.11 148 243 9.5E-25 T 23-04-2016 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 SMART SM00852 282 428 1.1E-42 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 Pfam PF00994 Probable molybdopterin binding domain 284 426 2.0E-28 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 SUPERFAMILY SSF63867 437 484 1.57E-9 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 Pfam PF03453 MoeA N-terminal region (domain I and II) 106 269 9.9E-35 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 PANTHER PTHR10192 105 484 5.2E-140 T 23-04-2016 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 Gene3D G3DSA:3.90.105.10 125 147 4.9E-19 T 23-04-2016 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 Gene3D G3DSA:3.90.105.10 244 264 4.9E-19 T 23-04-2016 RBRH_RS14860 8f3eabc28a84d13be525718ac9ad2872 484 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 279 423 3.4E-29 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS01055 3fc63d0f50d5e21e915cdbd82b2ea14c 371 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 95 344 1.3E-34 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RBRH_RS01055 3fc63d0f50d5e21e915cdbd82b2ea14c 371 Gene3D G3DSA:3.40.50.2000 194 364 1.4E-52 T 23-04-2016 RBRH_RS01055 3fc63d0f50d5e21e915cdbd82b2ea14c 371 Gene3D G3DSA:3.40.50.2000 22 174 2.8E-20 T 23-04-2016 RBRH_RS01055 3fc63d0f50d5e21e915cdbd82b2ea14c 371 PANTHER PTHR30160:SF11 21 370 1.2E-43 T 23-04-2016 RBRH_RS01055 3fc63d0f50d5e21e915cdbd82b2ea14c 371 PANTHER PTHR30160 21 370 1.2E-43 T 23-04-2016 RBRH_RS01055 3fc63d0f50d5e21e915cdbd82b2ea14c 371 SUPERFAMILY SSF53756 21 363 5.96E-77 T 23-04-2016 RBRH_RS04420 cff7fe606068de45077d30f424c9a386 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 9.5E-43 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RBRH_RS04420 cff7fe606068de45077d30f424c9a386 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.533 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RBRH_RS04420 cff7fe606068de45077d30f424c9a386 109 PANTHER PTHR13501 1 107 1.5E-46 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RBRH_RS04420 cff7fe606068de45077d30f424c9a386 109 SUPERFAMILY SSF54843 1 108 1.44E-40 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04420 cff7fe606068de45077d30f424c9a386 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04420 cff7fe606068de45077d30f424c9a386 109 Gene3D G3DSA:3.90.470.10 1 108 2.4E-41 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04420 cff7fe606068de45077d30f424c9a386 109 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 1.4E-32 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 PANTHER PTHR20852:SF15 4 140 3.6E-257 T 23-04-2016 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 PANTHER PTHR20852:SF15 163 471 3.6E-257 T 23-04-2016 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 6.7E-31 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 Gene3D G3DSA:3.10.20.70 5 107 1.8E-40 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 SUPERFAMILY SSF55931 104 470 1.18E-137 T 23-04-2016 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 Pfam PF00120 Glutamine synthetase, catalytic domain 104 468 3.0E-138 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 Gene3D G3DSA:3.30.590.10 108 459 1.0E-140 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 SMART SM01230 104 381 1.1E-146 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 SUPERFAMILY SSF54368 4 101 7.46E-36 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 PANTHER PTHR20852 4 140 3.6E-257 T 23-04-2016 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 PANTHER PTHR20852 163 471 3.6E-257 T 23-04-2016 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 23-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 23-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RBRH_RS08410 877930457a2080fe5d1aa2f85b578cee 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 2.1E-201 T 23-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RBRH_RS00360 98e2482e09c8d53b2a15d1a309b667f7 219 SUPERFAMILY SSF54523 13 86 7.32E-9 T 23-04-2016 RBRH_RS00360 98e2482e09c8d53b2a15d1a309b667f7 219 Pfam PF13633 Prokaryotic N-terminal methylation site 10 35 6.1E-11 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS00360 98e2482e09c8d53b2a15d1a309b667f7 219 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 31 2.0E-9 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS00360 98e2482e09c8d53b2a15d1a309b667f7 219 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site RBRH_RS10855 d7f8156ed78fcdb842d4041e838e991a 243 SUPERFAMILY SSF53335 1 233 9.53E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS10855 d7f8156ed78fcdb842d4041e838e991a 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 242 1.6E-83 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RBRH_RS10855 d7f8156ed78fcdb842d4041e838e991a 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 242 35.996 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RBRH_RS10855 d7f8156ed78fcdb842d4041e838e991a 243 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 151 165 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RBRH_RS10855 d7f8156ed78fcdb842d4041e838e991a 243 PANTHER PTHR10108 4 243 8.1E-136 T 23-04-2016 RBRH_RS10855 d7f8156ed78fcdb842d4041e838e991a 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 242 2.2E-73 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RBRH_RS10855 d7f8156ed78fcdb842d4041e838e991a 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RBRH_RS10855 d7f8156ed78fcdb842d4041e838e991a 243 PANTHER PTHR10108:SF864 4 243 8.1E-136 T 23-04-2016 RBRH_RS10855 d7f8156ed78fcdb842d4041e838e991a 243 Gene3D G3DSA:3.40.50.150 18 236 5.1E-49 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 PANTHER PTHR13847 1 63 7.3E-231 T 23-04-2016 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 PANTHER PTHR13847 107 418 7.3E-231 T 23-04-2016 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 51.251 T 23-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 PANTHER PTHR13847:SF148 1 63 7.3E-231 T 23-04-2016 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 PANTHER PTHR13847:SF148 107 418 7.3E-231 T 23-04-2016 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 SUPERFAMILY SSF51905 107 271 5.31E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 SUPERFAMILY SSF51905 1 54 5.31E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 SUPERFAMILY SSF51905 359 416 5.31E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 SUPERFAMILY SSF54373 269 359 5.23E-18 T 23-04-2016 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 Pfam PF01266 FAD dependent oxidoreductase 3 397 5.6E-71 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 226 244 1.8E-5 T 23-04-2016 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.8E-5 T 23-04-2016 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 Gene3D G3DSA:3.50.50.60 108 122 4.8E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 Gene3D G3DSA:3.50.50.60 359 417 4.8E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 Gene3D G3DSA:3.50.50.60 1 55 4.8E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 Gene3D G3DSA:3.50.50.60 190 269 4.8E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 Gene3D G3DSA:3.30.9.10 135 189 1.2E-15 T 23-04-2016 RBRH_RS03050 9f1b5b8b4203a05b187911e758a78813 430 Gene3D G3DSA:3.30.9.10 270 358 1.2E-15 T 23-04-2016 RBRH_RS03520 a13add5396f87de12286908635836402 148 PANTHER PTHR34235:SF3 3 145 7.2E-51 T 23-04-2016 RBRH_RS03520 a13add5396f87de12286908635836402 148 PANTHER PTHR34235 3 145 7.2E-51 T 23-04-2016 RBRH_RS03520 a13add5396f87de12286908635836402 148 Pfam PF01724 Domain of unknown function DUF29 5 143 2.5E-49 T 23-04-2016 IPR002636 Protein from unkown function DUF29 RBRH_RS00750 9bffe98d8181fe0187828e342ae0ce8d 123 Gene3D G3DSA:3.10.450.40 6 117 1.7E-31 T 23-04-2016 RBRH_RS00750 9bffe98d8181fe0187828e342ae0ce8d 123 Pfam PF04965 Gene 25-like lysozyme 16 100 5.9E-15 T 23-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD RBRH_RS00750 9bffe98d8181fe0187828e342ae0ce8d 123 PANTHER PTHR35862 1 119 2.9E-22 T 23-04-2016 RBRH_RS00750 9bffe98d8181fe0187828e342ae0ce8d 123 SUPERFAMILY SSF160719 8 118 5.49E-27 T 23-04-2016 RBRH_RS00750 9bffe98d8181fe0187828e342ae0ce8d 123 PANTHER PTHR35862:SF2 1 119 2.9E-22 T 23-04-2016 RBRH_RS03700 542fcb5e4a384505a92de4ee343aae04 212 PIRSF PIRSF000190 2 212 1.1E-83 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RBRH_RS03700 542fcb5e4a384505a92de4ee343aae04 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 212 40.21 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RBRH_RS03700 542fcb5e4a384505a92de4ee343aae04 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 119 1.9E-27 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RBRH_RS03700 542fcb5e4a384505a92de4ee343aae04 212 PANTHER PTHR10851 4 212 1.2E-109 T 23-04-2016 RBRH_RS03700 542fcb5e4a384505a92de4ee343aae04 212 Gene3D G3DSA:2.30.110.10 10 212 6.0E-89 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RBRH_RS03700 542fcb5e4a384505a92de4ee343aae04 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 212 8.3E-89 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RBRH_RS03700 542fcb5e4a384505a92de4ee343aae04 212 SUPERFAMILY SSF50475 7 212 1.52E-69 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RBRH_RS03700 542fcb5e4a384505a92de4ee343aae04 212 PANTHER PTHR10851:SF0 4 212 1.2E-109 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RBRH_RS03700 542fcb5e4a384505a92de4ee343aae04 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 23-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RBRH_RS03700 542fcb5e4a384505a92de4ee343aae04 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 6.2E-21 T 23-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 Gene3D G3DSA:3.40.50.300 1032 1095 4.5E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 PANTHER PTHR10887:SF350 379 405 1.1E-92 T 23-04-2016 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 Pfam PF13086 AAA domain 799 858 8.7E-7 T 23-04-2016 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 SUPERFAMILY SSF52540 378 465 1.6E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 SUPERFAMILY SSF52540 914 1096 1.6E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 SUPERFAMILY SSF52540 798 857 1.6E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 SUPERFAMILY SSF52540 304 346 1.6E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 Pfam PF13245 Part of AAA domain 317 403 1.1E-7 T 23-04-2016 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 Pfam PF13087 AAA domain 918 1093 1.7E-12 T 23-04-2016 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 Gene3D G3DSA:3.40.50.300 903 944 5.9E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 Gene3D G3DSA:3.40.50.300 379 440 5.9E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 Gene3D G3DSA:3.40.50.300 285 334 5.9E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 Gene3D G3DSA:3.40.50.300 819 861 5.9E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 PANTHER PTHR10887 266 353 1.1E-92 T 23-04-2016 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 Gene3D G3DSA:3.40.50.300 552 602 6.7E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 Gene3D G3DSA:3.40.50.300 335 350 6.7E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 PANTHER PTHR10887 898 1096 1.1E-92 T 23-04-2016 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 PANTHER PTHR10887 780 858 1.1E-92 T 23-04-2016 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 PANTHER PTHR10887:SF350 266 353 1.1E-92 T 23-04-2016 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 PANTHER PTHR10887:SF350 898 1096 1.1E-92 T 23-04-2016 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 PANTHER PTHR10887:SF350 780 858 1.1E-92 T 23-04-2016 RBRH_RS07965 b94be18c1d1d320fbf729d0a639c640d 1133 PANTHER PTHR10887 379 405 1.1E-92 T 23-04-2016 RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 Gene3D G3DSA:3.40.980.10 179 353 3.7E-58 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 SUPERFAMILY SSF53218 193 346 9.82E-42 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 SUPERFAMILY SSF63882 16 192 5.1E-48 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 PANTHER PTHR10192:SF11 19 431 2.3E-155 T 23-04-2016 RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 Gene3D G3DSA:3.90.105.10 158 178 3.8E-19 T 23-04-2016 RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 Gene3D G3DSA:3.90.105.10 39 61 3.8E-19 T 23-04-2016 RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 Gene3D G3DSA:2.40.340.10 354 425 1.6E-29 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 Pfam PF00994 Probable molybdopterin binding domain 198 340 1.6E-28 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 PANTHER PTHR10192 19 431 2.3E-155 T 23-04-2016 RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 SMART SM00852 196 342 1.1E-42 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 Pfam PF03453 MoeA N-terminal region (domain I and II) 20 183 7.7E-35 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 Gene3D G3DSA:2.170.190.11 62 157 7.8E-25 T 23-04-2016 RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 SUPERFAMILY SSF63867 351 430 6.8E-24 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 193 337 2.7E-29 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS03235 efb68624e864a6e2a56527a4019c4548 431 Pfam PF03454 MoeA C-terminal region (domain IV) 356 427 3.0E-17 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 SUPERFAMILY SSF64484 1140 1369 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 SUPERFAMILY SSF64484 16 949 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Gene3D G3DSA:2.40.50.100 1163 1215 1.6E-6 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 342 1.7E-87 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 PANTHER PTHR19376:SF32 1183 1268 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 PANTHER PTHR19376:SF32 575 948 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 PANTHER PTHR19376:SF32 967 1164 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 PANTHER PTHR19376:SF32 1309 1414 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 PANTHER PTHR19376:SF32 4 551 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 PANTHER PTHR19376 1183 1268 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 PANTHER PTHR19376 575 948 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 PANTHER PTHR19376 967 1164 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 PANTHER PTHR19376 1309 1414 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 PANTHER PTHR19376 4 551 0.0 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Pfam PF00623 RNA polymerase Rpb1, domain 2 391 485 1.9E-27 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 3.8E-8 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 SMART SM00663 235 514 4.5E-175 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 768 7.4E-19 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1382 10.444 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1373 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 649 5.5E-20 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 593 32.252 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 1322 1.7E-77 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Gene3D G3DSA:2.40.40.20 349 376 1.6E-36 T 23-04-2016 RBRH_RS04350 8d294703da728ef27096b09ffb89de5d 1416 Gene3D G3DSA:2.40.40.20 417 489 1.6E-36 T 23-04-2016 RBRH_RS05090 72e20f281b7e1401933c784e42cf6056 435 Pfam PF00501 AMP-binding enzyme 81 289 6.0E-16 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS05090 72e20f281b7e1401933c784e42cf6056 435 Gene3D G3DSA:3.30.300.30 325 432 1.2E-34 T 23-04-2016 RBRH_RS05090 72e20f281b7e1401933c784e42cf6056 435 PIRSF PIRSF006444 1 433 7.1E-201 T 23-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 RBRH_RS05090 72e20f281b7e1401933c784e42cf6056 435 Gene3D G3DSA:3.40.50.980 92 250 1.3E-12 T 23-04-2016 RBRH_RS05090 72e20f281b7e1401933c784e42cf6056 435 SUPERFAMILY SSF56801 22 394 1.3E-62 T 23-04-2016 RBRH_RS05090 72e20f281b7e1401933c784e42cf6056 435 PANTHER PTHR24095 59 353 1.2E-179 T 23-04-2016 RBRH_RS05090 72e20f281b7e1401933c784e42cf6056 435 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 11 431 4.6E-205 T 23-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 RBRH_RS05090 72e20f281b7e1401933c784e42cf6056 435 Pfam PF14535 AMP-binding enzyme C-terminal domain 335 431 9.6E-22 T 23-04-2016 IPR028154 AMP-dependent ligase, C-terminal RBRH_RS05090 72e20f281b7e1401933c784e42cf6056 435 PANTHER PTHR24095:SF175 59 353 1.2E-179 T 23-04-2016 RBRH_RS00425 03ad776e58f5ca2613109932ea08f5cd 371 PANTHER PTHR36510:SF1 1 369 2.4E-119 T 23-04-2016 RBRH_RS00425 03ad776e58f5ca2613109932ea08f5cd 371 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 297 5.5E-99 T 23-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RBRH_RS00425 03ad776e58f5ca2613109932ea08f5cd 371 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 371 99.05 T 23-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RBRH_RS00425 03ad776e58f5ca2613109932ea08f5cd 371 PANTHER PTHR36510 1 369 2.4E-119 T 23-04-2016 RBRH_RS00425 03ad776e58f5ca2613109932ea08f5cd 371 SUPERFAMILY SSF55931 4 369 1.37E-112 T 23-04-2016 RBRH_RS00425 03ad776e58f5ca2613109932ea08f5cd 371 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 291 6.2E-54 T 23-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RBRH_RS05335 c1a2d6c949f15b1988a0641eda6d8bbb 136 Pfam PF13411 MerR HTH family regulatory protein 15 84 9.1E-23 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05335 c1a2d6c949f15b1988a0641eda6d8bbb 136 Gene3D G3DSA:1.10.1660.10 12 83 3.4E-18 T 23-04-2016 RBRH_RS05335 c1a2d6c949f15b1988a0641eda6d8bbb 136 SUPERFAMILY SSF46955 13 85 4.53E-18 T 23-04-2016 IPR009061 Putative DNA-binding domain RBRH_RS05335 c1a2d6c949f15b1988a0641eda6d8bbb 136 PANTHER PTHR30204 7 87 6.1E-27 T 23-04-2016 RBRH_RS05335 c1a2d6c949f15b1988a0641eda6d8bbb 136 SMART SM00422 15 85 2.3E-7 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05335 c1a2d6c949f15b1988a0641eda6d8bbb 136 PANTHER PTHR30204:SF15 7 87 6.1E-27 T 23-04-2016 RBRH_RS01340 0d2df5c2a104508cc3623917b8a7b150 413 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 22 413 3.1E-121 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RBRH_RS01340 0d2df5c2a104508cc3623917b8a7b150 413 PANTHER PTHR23100:SF0 18 413 1.2E-171 T 23-04-2016 RBRH_RS01340 0d2df5c2a104508cc3623917b8a7b150 413 PANTHER PTHR23100 18 413 1.2E-171 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RBRH_RS01340 0d2df5c2a104508cc3623917b8a7b150 413 Gene3D G3DSA:3.60.70.12 12 284 5.9E-98 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RBRH_RS01340 0d2df5c2a104508cc3623917b8a7b150 413 Pfam PF01960 ArgJ family 24 413 3.3E-142 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RBRH_RS01340 0d2df5c2a104508cc3623917b8a7b150 413 SUPERFAMILY SSF56266 16 410 2.49E-135 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RBRH_RS01340 0d2df5c2a104508cc3623917b8a7b150 413 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 411 0.0 T 23-04-2016 RBRH_RS01340 0d2df5c2a104508cc3623917b8a7b150 413 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 413 156.122 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 ProSitePatterns PS00380 Rhodanese signature 1. 45 56 - T 23-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 SMART SM00450 12 138 8.7E-21 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 SMART SM00450 161 281 4.8E-11 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 PANTHER PTHR11364 1 286 1.2E-87 T 23-04-2016 RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 SUPERFAMILY SSF52821 166 288 6.42E-30 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 Gene3D G3DSA:3.40.250.10 156 287 1.1E-33 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 Gene3D G3DSA:3.40.250.10 3 153 6.6E-49 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 ProSitePatterns PS00683 Rhodanese C-terminal signature. 265 275 - T 23-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 Pfam PF00581 Rhodanese-like domain 168 277 6.0E-9 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 Pfam PF00581 Rhodanese-like domain 15 135 1.7E-17 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 SUPERFAMILY SSF52821 1 153 1.57E-40 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS04135 f4fc5dc80a5606b9c6ab5358d492e54a 289 PANTHER PTHR11364:SF0 1 286 1.2E-87 T 23-04-2016 RBRH_RS03340 1d68624ef0513d770dd634ae773cc033 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 191 1.7E-98 T 23-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS03340 1d68624ef0513d770dd634ae773cc033 199 Pfam PF08281 Sigma-70, region 4 133 182 8.9E-19 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS03340 1d68624ef0513d770dd634ae773cc033 199 PANTHER PTHR30173 7 198 2.3E-52 T 23-04-2016 RBRH_RS03340 1d68624ef0513d770dd634ae773cc033 199 SUPERFAMILY SSF88659 124 187 2.06E-18 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS03340 1d68624ef0513d770dd634ae773cc033 199 Pfam PF04542 Sigma-70 region 2 25 92 7.1E-20 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS03340 1d68624ef0513d770dd634ae773cc033 199 SUPERFAMILY SSF88946 4 109 1.54E-32 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS03340 1d68624ef0513d770dd634ae773cc033 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 8.3E-35 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS03340 1d68624ef0513d770dd634ae773cc033 199 Gene3D G3DSA:1.10.1740.10 4 113 4.1E-39 T 23-04-2016 RBRH_RS03340 1d68624ef0513d770dd634ae773cc033 199 Gene3D G3DSA:1.10.10.10 125 189 9.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS03340 1d68624ef0513d770dd634ae773cc033 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS16640 a0ccc0eb4572d8c0e2858dd40e04aad7 60 Pfam PF00580 UvrD/REP helicase N-terminal domain 1 54 3.7E-16 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RBRH_RS16640 a0ccc0eb4572d8c0e2858dd40e04aad7 60 PANTHER PTHR11070:SF19 1 47 1.8E-18 T 23-04-2016 RBRH_RS16640 a0ccc0eb4572d8c0e2858dd40e04aad7 60 SUPERFAMILY SSF52540 1 46 1.02E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS16640 a0ccc0eb4572d8c0e2858dd40e04aad7 60 PANTHER PTHR11070 1 47 1.8E-18 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RBRH_RS16640 a0ccc0eb4572d8c0e2858dd40e04aad7 60 Gene3D G3DSA:3.40.50.300 1 46 1.1E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 PANTHER PTHR10804 1 253 5.6E-149 T 23-04-2016 RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 Hamap MF_01974 Methionine aminopeptidase [map]. 3 255 41.493 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 PANTHER PTHR10804:SF75 1 253 5.6E-149 T 23-04-2016 RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 253 6.1E-96 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 4.1E-22 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 4.1E-22 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 197 209 4.1E-22 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 166 178 4.1E-22 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 Pfam PF00557 Metallopeptidase family M24 13 246 6.3E-54 T 23-04-2016 IPR000994 Peptidase M24, structural domain RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 172 190 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 Gene3D G3DSA:3.90.230.10 4 254 9.8E-99 T 23-04-2016 IPR000994 Peptidase M24, structural domain RBRH_RS06430 871f23ac6fd4b8619783795cbfbd677c 268 SUPERFAMILY SSF55920 4 254 9.29E-91 T 23-04-2016 IPR000994 Peptidase M24, structural domain RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 23-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.5E-24 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 SMART SM01185 67 120 1.9E-20 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 Gene3D G3DSA:2.30.30.30 1 62 3.8E-22 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 3.9E-17 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 Gene3D G3DSA:2.40.50.140 127 185 2.1E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 48.651 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 4.9E-20 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 SUPERFAMILY SSF50104 1 63 5.52E-17 T 23-04-2016 IPR008991 Translation protein SH3-like domain RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 1.5E-64 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 SUPERFAMILY SSF50249 128 185 3.77E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 Gene3D G3DSA:2.40.50.140 65 126 3.5E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 SUPERFAMILY SSF50249 65 126 2.53E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 SMART SM00841 128 184 3.0E-29 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 PIRSF PIRSF005901 1 185 9.5E-57 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 RBRH_RS03410 46ff3b6e8f348abf1f8bd9880b750bf1 185 PANTHER PTHR30053 1 185 3.2E-69 T 23-04-2016 RBRH_RS07105 44d85021df3028588c3a88ac74944a9c 400 PANTHER PTHR23534 9 396 3.1E-76 T 23-04-2016 RBRH_RS07105 44d85021df3028588c3a88ac74944a9c 400 Pfam PF07690 Major Facilitator Superfamily 20 251 1.7E-18 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS07105 44d85021df3028588c3a88ac74944a9c 400 Gene3D G3DSA:1.20.1250.20 16 190 1.3E-14 T 23-04-2016 RBRH_RS07105 44d85021df3028588c3a88ac74944a9c 400 Gene3D G3DSA:1.20.1250.20 213 389 1.7E-14 T 23-04-2016 RBRH_RS07105 44d85021df3028588c3a88ac74944a9c 400 SUPERFAMILY SSF103473 12 390 2.62E-40 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS05885 f15df934c4d89da0f809a2f699907323 271 SUPERFAMILY SSF48452 38 121 1.57E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS05885 f15df934c4d89da0f809a2f699907323 271 Gene3D G3DSA:1.25.40.10 38 114 5.2E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS05885 f15df934c4d89da0f809a2f699907323 271 Gene3D G3DSA:1.25.40.10 187 238 5.2E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS05885 f15df934c4d89da0f809a2f699907323 271 PANTHER PTHR37423 1 254 4.5E-72 T 23-04-2016 RBRH_RS05885 f15df934c4d89da0f809a2f699907323 271 Pfam PF13525 Outer membrane lipoprotein 36 241 2.7E-62 T 23-04-2016 RBRH_RS05885 f15df934c4d89da0f809a2f699907323 271 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 3 248 45.898 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD RBRH_RS05885 f15df934c4d89da0f809a2f699907323 271 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 252 3.6E-83 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 Pfam PF13332 Haemagluttinin repeat 2178 2347 9.4E-38 T 23-04-2016 IPR025157 Haemagluttinin repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 Pfam PF13332 Haemagluttinin repeat 1944 2100 3.6E-11 T 23-04-2016 IPR025157 Haemagluttinin repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 PANTHER PTHR32093 14 162 8.6E-35 T 23-04-2016 RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 63 160 1.1E-20 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 Pfam PF05860 haemagglutination activity domain 28 160 1.8E-29 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 SMART SM00912 44 165 1.2E-39 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 799 830 0.045 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1324 1361 9.6E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1650 1688 0.021 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 605 638 0.89 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 557 594 3.4E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 424 463 0.071 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 648 682 0.0049 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 312 344 0.26 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 465 505 5.9E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 510 557 0.5 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 445 483 1.3E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 690 724 0.0023 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 734 768 0.011 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1416 1434 1.3 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 846 863 0.81 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 490 528 0.0037 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 619 652 0.18 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 580 617 0.15 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 SUPERFAMILY SSF51126 39 291 2.07E-48 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor RBRH_RS02040 537572dd2686c189646ef1ff3a1290eb 2974 Gene3D G3DSA:2.160.20.10 36 327 2.7E-87 T 23-04-2016 IPR012334 Pectin lyase fold RBRH_RS14935 63975affe7973d7e611c2e6906a37149 216 SUPERFAMILY SSF52151 3 88 9.59E-43 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RBRH_RS14935 63975affe7973d7e611c2e6906a37149 216 SUPERFAMILY SSF52151 158 216 9.59E-43 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RBRH_RS14935 63975affe7973d7e611c2e6906a37149 216 Pfam PF00698 Acyl transferase domain 7 191 3.0E-25 T 23-04-2016 IPR014043 Acyl transferase RBRH_RS14935 63975affe7973d7e611c2e6906a37149 216 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 216 1.1E-13 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RBRH_RS14935 63975affe7973d7e611c2e6906a37149 216 PANTHER PTHR10982 3 216 1.3E-94 T 23-04-2016 RBRH_RS14935 63975affe7973d7e611c2e6906a37149 216 Gene3D G3DSA:3.30.70.250 85 156 6.0E-30 T 23-04-2016 RBRH_RS14935 63975affe7973d7e611c2e6906a37149 216 SUPERFAMILY SSF55048 89 157 6.67E-18 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RBRH_RS14935 63975affe7973d7e611c2e6906a37149 216 Gene3D G3DSA:3.40.366.10 157 216 4.9E-40 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RBRH_RS14935 63975affe7973d7e611c2e6906a37149 216 Gene3D G3DSA:3.40.366.10 3 82 4.9E-40 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RBRH_RS00985 ee859089a59fa1857501e97ca3cea421 131 SMART SM00905 16 127 2.5E-29 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RBRH_RS00985 ee859089a59fa1857501e97ca3cea421 131 SUPERFAMILY SSF55620 12 127 1.22E-27 T 23-04-2016 RBRH_RS00985 ee859089a59fa1857501e97ca3cea421 131 Gene3D G3DSA:3.30.1130.10 15 127 3.1E-31 T 23-04-2016 RBRH_RS00985 ee859089a59fa1857501e97ca3cea421 131 TIGRFAM TIGR00526 folB_dom: FolB domain 15 129 2.4E-15 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RBRH_RS00985 ee859089a59fa1857501e97ca3cea421 131 Pfam PF02152 Dihydroneopterin aldolase 16 125 2.0E-24 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 SUPERFAMILY SSF46911 14 87 3.27E-27 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 Gene3D G3DSA:4.10.640.10 23 88 1.2E-29 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 17 88 20.12 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 PANTHER PTHR13479 19 87 7.5E-24 T 23-04-2016 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 Pfam PF01084 Ribosomal protein S18 33 83 4.2E-23 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 TIGRFAM TIGR00165 S18: ribosomal protein bS18 20 87 3.8E-33 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 ProSitePatterns PS00057 Ribosomal protein S18 signature. 36 59 - T 23-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 PRINTS PR00974 Ribosomal protein S18 family signature 53 60 3.23E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 PRINTS PR00974 Ribosomal protein S18 family signature 61 75 3.23E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 PRINTS PR00974 Ribosomal protein S18 family signature 43 53 3.23E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 PRINTS PR00974 Ribosomal protein S18 family signature 75 85 3.23E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05985 4d49d4705605b5c5da447b0ce8c3220d 91 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 36 87 2.0E-23 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 SMART SM00228 474 557 1.2E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 PANTHER PTHR22939:SF73 420 426 2.0E-12 T 23-04-2016 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 PANTHER PTHR22939:SF73 495 575 2.0E-12 T 23-04-2016 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 SUPERFAMILY SSF55486 216 459 1.25E-9 T 23-04-2016 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 PANTHER PTHR22939 420 426 2.0E-12 T 23-04-2016 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 PANTHER PTHR22939 495 575 2.0E-12 T 23-04-2016 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 Gene3D G3DSA:2.30.42.10 477 568 9.1E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 SUPERFAMILY SSF50156 485 580 1.3E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 Pfam PF13180 PDZ domain 491 566 8.8E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 PIRSF PIRSF016493 1 594 4.3E-217 T 23-04-2016 IPR024191 Peptidase M61 RBRH_RS05030 eba64cb65b1d66d989980afb0ca95631 597 Pfam PF05299 M61 glycyl aminopeptidase 280 395 4.6E-47 T 23-04-2016 IPR007963 Peptidase M61, catalytic domain RBRH_RS09760 5372b5484e628b75a37022b0df434688 319 Pfam PF10727 Rossmann-like domain 8 124 5.1E-16 T 23-04-2016 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain RBRH_RS09760 5372b5484e628b75a37022b0df434688 319 PANTHER PTHR40459 1 304 2.7E-44 T 23-04-2016 RBRH_RS09760 5372b5484e628b75a37022b0df434688 319 PANTHER PTHR40459:SF1 1 304 2.7E-44 T 23-04-2016 RBRH_RS09760 5372b5484e628b75a37022b0df434688 319 Gene3D G3DSA:3.40.50.720 7 171 2.2E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09760 5372b5484e628b75a37022b0df434688 319 SUPERFAMILY SSF48179 174 277 5.1E-17 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RBRH_RS09760 5372b5484e628b75a37022b0df434688 319 Gene3D G3DSA:1.10.1040.20 174 274 3.8E-22 T 23-04-2016 IPR018931 Domain of unknown function DUF2520 RBRH_RS09760 5372b5484e628b75a37022b0df434688 319 Pfam PF10728 Domain of unknown function (DUF2520) 141 269 6.5E-25 T 23-04-2016 IPR018931 Domain of unknown function DUF2520 RBRH_RS09760 5372b5484e628b75a37022b0df434688 319 SUPERFAMILY SSF51735 9 170 2.17E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS10240 d60d1bf8f2407a884c6d22e802fd9e7a 207 Pfam PF11161 Protein of unknown function (DUF2946) 1 194 3.0E-68 T 23-04-2016 IPR021332 Protein of unknown function DUF2944 RBRH_RS00095 7e2de73b03f36ecfdee46860d54c9029 146 SUPERFAMILY SSF160719 31 130 1.83E-24 T 23-04-2016 RBRH_RS00095 7e2de73b03f36ecfdee46860d54c9029 146 Gene3D G3DSA:3.10.450.40 6 136 1.7E-34 T 23-04-2016 RBRH_RS00095 7e2de73b03f36ecfdee46860d54c9029 146 Pfam PF04965 Gene 25-like lysozyme 36 125 2.1E-20 T 23-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD RBRH_RS00095 7e2de73b03f36ecfdee46860d54c9029 146 PANTHER PTHR35862:SF2 30 121 4.8E-12 T 23-04-2016 RBRH_RS00095 7e2de73b03f36ecfdee46860d54c9029 146 PANTHER PTHR35862 30 121 4.8E-12 T 23-04-2016 RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 PANTHER PTHR20861 13 284 1.8E-80 T 23-04-2016 RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 9 287 32.443 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 Gene3D G3DSA:3.30.70.890 165 298 5.1E-37 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 PANTHER PTHR20861:SF2 13 284 1.8E-80 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 12 277 7.1E-74 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 SUPERFAMILY SSF55060 165 298 3.17E-26 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 SUPERFAMILY SSF54211 12 162 1.37E-44 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 Pfam PF00288 GHMP kinases N terminal domain 92 148 6.2E-10 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 PIRSF PIRSF010376 7 297 1.4E-87 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 Pfam PF08544 GHMP kinases C terminal 221 278 5.5E-5 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain RBRH_RS11065 9855615b65761462f9d4695b6228c4f2 300 Gene3D G3DSA:3.30.230.10 12 163 1.6E-54 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS02685 6d1a04927a1e0c638c05bb76ecd041f2 209 Pfam PF11448 Protein of unknown function (DUF3005) 71 202 8.6E-43 T 23-04-2016 IPR021551 Protein of unknown function DUF3005 RBRH_RS16245 a69084198adf05088d1de26de0269cd8 73 SUPERFAMILY SSF48179 10 69 6.23E-18 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RBRH_RS16245 a69084198adf05088d1de26de0269cd8 73 PANTHER PTHR22981 1 68 4.5E-28 T 23-04-2016 RBRH_RS16245 a69084198adf05088d1de26de0269cd8 73 Gene3D G3DSA:1.10.1040.10 11 68 4.2E-21 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RBRH_RS16245 a69084198adf05088d1de26de0269cd8 73 PANTHER PTHR22981:SF51 1 68 4.5E-28 T 23-04-2016 RBRH_RS16245 a69084198adf05088d1de26de0269cd8 73 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 12 69 2.0E-15 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 PANTHER PTHR12383:SF27 238 299 8.5E-88 T 23-04-2016 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 PANTHER PTHR12383:SF27 1 203 8.5E-88 T 23-04-2016 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 Gene3D G3DSA:2.10.109.10 89 167 9.9E-57 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 Gene3D G3DSA:2.10.109.10 253 299 9.9E-57 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 253 272 2.8E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 157 169 2.8E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 93 109 2.8E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 Pfam PF10502 Signal peptidase, peptidase S26 252 290 4.9E-6 T 23-04-2016 IPR019533 Peptidase S26 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 SUPERFAMILY SSF51306 91 299 2.79E-67 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 ProSitePatterns PS00501 Signal peptidases I serine active site. 102 109 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 ProSitePatterns PS00761 Signal peptidases I signature 3. 258 271 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 79 293 1.0E-50 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 Pfam PF00717 Peptidase S24-like 99 181 1.1E-21 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 PANTHER PTHR12383 238 299 8.5E-88 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 PANTHER PTHR12383 1 203 8.5E-88 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RBRH_RS03370 9c21625cbaad7c21ed4ed12d7e9c1a8f 303 ProSitePatterns PS00760 Signal peptidases I lysine active site. 159 171 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RBRH_RS10065 09f3fb484ec443502f9e3b42f951714f 386 SUPERFAMILY SSF103473 7 376 4.97E-40 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS10065 09f3fb484ec443502f9e3b42f951714f 386 Gene3D G3DSA:1.20.1250.20 203 377 3.0E-13 T 23-04-2016 RBRH_RS10065 09f3fb484ec443502f9e3b42f951714f 386 PANTHER PTHR23521 3 381 1.0E-46 T 23-04-2016 RBRH_RS10065 09f3fb484ec443502f9e3b42f951714f 386 Gene3D G3DSA:1.20.1250.20 6 180 9.9E-19 T 23-04-2016 RBRH_RS10065 09f3fb484ec443502f9e3b42f951714f 386 Pfam PF07690 Major Facilitator Superfamily 13 343 9.6E-27 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS02835 99656028bfe9e6919718b5ed70ff55c0 456 Pfam PF00860 Permease family 30 418 2.8E-37 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RBRH_RS02835 99656028bfe9e6919718b5ed70ff55c0 456 PANTHER PTHR11119 7 234 1.2E-118 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RBRH_RS02835 99656028bfe9e6919718b5ed70ff55c0 456 PANTHER PTHR11119 250 444 1.2E-118 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RBRH_RS02835 99656028bfe9e6919718b5ed70ff55c0 456 PANTHER PTHR11119:SF9 7 234 1.2E-118 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 RBRH_RS02835 99656028bfe9e6919718b5ed70ff55c0 456 PANTHER PTHR11119:SF9 250 444 1.2E-118 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 Gene3D G3DSA:3.30.420.40 4 70 6.6E-27 T 23-04-2016 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 Gene3D G3DSA:3.30.420.40 104 187 6.6E-27 T 23-04-2016 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 SUPERFAMILY SSF53067 178 245 4.59E-27 T 23-04-2016 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 Pfam PF00012 Hsp70 protein 297 411 3.1E-5 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 Pfam PF00012 Hsp70 protein 99 229 3.3E-11 T 23-04-2016 IPR013126 Heat shock protein 70 family RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 Gene3D G3DSA:3.30.420.40 188 224 5.6E-12 T 23-04-2016 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 Gene3D G3DSA:3.30.420.40 355 396 5.6E-12 T 23-04-2016 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 PANTHER PTHR19375:SF182 1 239 2.0E-64 T 23-04-2016 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 PANTHER PTHR19375:SF182 286 413 2.0E-64 T 23-04-2016 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 SUPERFAMILY SSF53067 295 417 4.59E-27 T 23-04-2016 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 SUPERFAMILY SSF53067 3 174 1.04E-28 T 23-04-2016 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 PANTHER PTHR19375 1 239 2.0E-64 T 23-04-2016 RBRH_RS04930 6d962d5007f9b18b3c54c35319391ed6 420 PANTHER PTHR19375 286 413 2.0E-64 T 23-04-2016 RBRH_RS01375 b4bb2ea7955016f4b3ac577a4afbbcab 413 Pfam PF00482 Type II secretion system (T2SS), protein F 81 202 1.3E-24 T 23-04-2016 IPR018076 Type II secretion system F domain RBRH_RS01375 b4bb2ea7955016f4b3ac577a4afbbcab 413 Pfam PF00482 Type II secretion system (T2SS), protein F 285 405 6.4E-18 T 23-04-2016 IPR018076 Type II secretion system F domain RBRH_RS01375 b4bb2ea7955016f4b3ac577a4afbbcab 413 PANTHER PTHR30012 21 413 3.4E-93 T 23-04-2016 RBRH_RS01375 b4bb2ea7955016f4b3ac577a4afbbcab 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 174 202 1.5E-17 T 23-04-2016 IPR003004 GspF/PilC family RBRH_RS01375 b4bb2ea7955016f4b3ac577a4afbbcab 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 378 392 1.5E-17 T 23-04-2016 IPR003004 GspF/PilC family RBRH_RS01375 b4bb2ea7955016f4b3ac577a4afbbcab 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 394 413 1.5E-17 T 23-04-2016 IPR003004 GspF/PilC family RBRH_RS01375 b4bb2ea7955016f4b3ac577a4afbbcab 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 76 88 1.5E-17 T 23-04-2016 IPR003004 GspF/PilC family RBRH_RS01375 b4bb2ea7955016f4b3ac577a4afbbcab 413 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 174 202 - T 23-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 RBRH_RS01375 b4bb2ea7955016f4b3ac577a4afbbcab 413 PANTHER PTHR30012:SF0 21 413 3.4E-93 T 23-04-2016 RBRH_RS02270 77328802592f2ed295d2c3f6c3daada5 213 SUPERFAMILY SSF53328 2 197 3.27E-66 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS02270 77328802592f2ed295d2c3f6c3daada5 213 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.24 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RBRH_RS02270 77328802592f2ed295d2c3f6c3daada5 213 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 2.3E-72 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RBRH_RS02270 77328802592f2ed295d2c3f6c3daada5 213 Pfam PF00551 Formyl transferase 2 182 1.8E-57 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS02270 77328802592f2ed295d2c3f6c3daada5 213 PANTHER PTHR10520 1 194 6.1E-100 T 23-04-2016 RBRH_RS02270 77328802592f2ed295d2c3f6c3daada5 213 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS02270 77328802592f2ed295d2c3f6c3daada5 213 Gene3D G3DSA:3.40.50.170 1 196 1.9E-72 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RBRH_RS05515 ce8f2a02f853591bc22e0f8b827e2a47 161 Pfam PF08982 Domain of unknown function (DUF1857) 7 154 8.1E-40 T 23-04-2016 IPR015075 Protein of unknown function DUF1857 RBRH_RS05515 ce8f2a02f853591bc22e0f8b827e2a47 161 Gene3D G3DSA:3.30.530.20 1 157 3.6E-66 T 23-04-2016 IPR023393 START-like domain RBRH_RS05515 ce8f2a02f853591bc22e0f8b827e2a47 161 SUPERFAMILY SSF55961 2 152 2.61E-51 T 23-04-2016 RBRH_RS10380 459683fb1a2cdc7f542083c90da365be 275 Pfam PF03405 Fatty acid desaturase 28 193 5.9E-7 T 23-04-2016 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 UniPathway: UPA00199 RBRH_RS10380 459683fb1a2cdc7f542083c90da365be 275 SUPERFAMILY SSF47240 10 191 1.24E-39 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS10380 459683fb1a2cdc7f542083c90da365be 275 Gene3D G3DSA:1.10.620.20 8 193 2.4E-16 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RBRH_RS11195 af6792592f4d761e4dc14fb6d00b0944 237 PANTHER PTHR23427 2 228 2.5E-20 T 23-04-2016 RBRH_RS11195 af6792592f4d761e4dc14fb6d00b0944 237 PANTHER PTHR23427:SF2 2 228 2.5E-20 T 23-04-2016 RBRH_RS11195 af6792592f4d761e4dc14fb6d00b0944 237 Pfam PF02104 SURF1 family 13 215 2.1E-35 T 23-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 RBRH_RS01180 4291ed462bb69388dbcc750cafbb38ed 94 PIRSF PIRSF030200 1 94 3.5E-45 T 23-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 RBRH_RS01180 4291ed462bb69388dbcc750cafbb38ed 94 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 5 94 1.9E-46 T 23-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 RBRH_RS01180 4291ed462bb69388dbcc750cafbb38ed 94 Pfam PF06243 Phenylacetic acid degradation B 4 91 6.0E-41 T 23-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 RBRH_RS10845 1046c7d787cb8c55eac333f79419b89e 254 PANTHER PTHR38693:SF1 100 236 2.9E-14 T 23-04-2016 RBRH_RS10845 1046c7d787cb8c55eac333f79419b89e 254 PANTHER PTHR38693 100 236 2.9E-14 T 23-04-2016 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 Gene3D G3DSA:3.40.50.620 24 245 8.3E-80 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 SUPERFAMILY SSF52374 24 330 8.55E-90 T 23-04-2016 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 PANTHER PTHR11766:SF1 18 413 1.4E-217 T 23-04-2016 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 Gene3D G3DSA:3.10.290.10 343 412 1.8E-23 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 196 218 2.8E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 229 241 2.8E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 64 86 2.8E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 179 194 2.8E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 SUPERFAMILY SSF55174 334 409 3.97E-17 T 23-04-2016 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 PANTHER PTHR11766 18 413 1.4E-217 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 Gene3D G3DSA:1.10.240.10 246 342 1.5E-33 T 23-04-2016 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 Pfam PF00579 tRNA synthetases class I (W and Y) 49 331 3.5E-74 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 20 412 9.8E-117 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 70 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 16 412 47.373 T 23-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 Pfam PF13275 S4 domain 348 399 1.1E-5 T 23-04-2016 RBRH_RS10680 728563cf26a1637b8b029b78fe7a3c63 414 SMART SM00363 352 413 0.0064 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS03415 3c9fd3d4d8b66ce06fc27a5361005ad2 403 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 17 398 5.8E-150 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RBRH_RS03415 3c9fd3d4d8b66ce06fc27a5361005ad2 403 PIRSF PIRSF015557 12 403 1.0E-159 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RBRH_RS03415 3c9fd3d4d8b66ce06fc27a5361005ad2 403 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 17 398 1.1E-145 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RBRH_RS00945 ee92a93ce19a3e49a04722d7f53cef14 186 Gene3D G3DSA:3.30.870.10 49 184 1.6E-34 T 23-04-2016 RBRH_RS00945 ee92a93ce19a3e49a04722d7f53cef14 186 SUPERFAMILY SSF56024 42 184 7.63E-33 T 23-04-2016 RBRH_RS00945 ee92a93ce19a3e49a04722d7f53cef14 186 PANTHER PTHR21248 42 186 7.5E-36 T 23-04-2016 RBRH_RS00945 ee92a93ce19a3e49a04722d7f53cef14 186 Pfam PF13091 PLD-like domain 57 177 1.9E-22 T 23-04-2016 IPR025202 Phospholipase D-like domain RBRH_RS05560 bc2e9272a9b70ee834776b0362cb429f 227 Gene3D G3DSA:3.90.1720.10 84 208 1.1E-47 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS05560 bc2e9272a9b70ee834776b0362cb429f 227 SUPERFAMILY SSF54001 83 207 1.03E-42 T 23-04-2016 RBRH_RS05560 bc2e9272a9b70ee834776b0362cb429f 227 Pfam PF00877 NlpC/P60 family 99 206 8.5E-32 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS05560 bc2e9272a9b70ee834776b0362cb429f 227 PANTHER PTHR21666 94 206 3.8E-40 T 23-04-2016 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 SUPERFAMILY SSF101790 278 369 8.67E-21 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 366 1.9E-114 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 PANTHER PTHR13847:SF5 5 365 8.3E-57 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 PIRSF PIRSF006487 1 370 4.7E-78 T 23-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 262 1.8E-84 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 270 362 4.4E-16 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 367 42.796 T 23-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 PANTHER PTHR13847 5 365 8.3E-57 T 23-04-2016 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 Gene3D G3DSA:3.30.1360.120 4 55 7.6E-50 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 Gene3D G3DSA:3.30.1360.120 148 239 7.6E-50 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 SUPERFAMILY SSF103025 3 280 3.45E-89 T 23-04-2016 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 Gene3D G3DSA:2.40.30.110 284 369 1.5E-24 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RBRH_RS00615 95c5c6bedc57de146c84c7ba566c213c 372 Gene3D G3DSA:3.30.70.1400 56 140 1.5E-28 T 23-04-2016 RBRH_RS11565 344cf0c559325cbe0dadf2740428f5f1 584 PANTHER PTHR30627:SF1 16 573 4.7E-181 T 23-04-2016 RBRH_RS11565 344cf0c559325cbe0dadf2740428f5f1 584 SUPERFAMILY SSF56519 70 232 1.44E-37 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RBRH_RS11565 344cf0c559325cbe0dadf2740428f5f1 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 258 557 3.7E-68 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RBRH_RS11565 344cf0c559325cbe0dadf2740428f5f1 584 Gene3D G3DSA:3.90.1310.10 139 239 8.4E-25 T 23-04-2016 RBRH_RS11565 344cf0c559325cbe0dadf2740428f5f1 584 PANTHER PTHR30627 16 573 4.7E-181 T 23-04-2016 RBRH_RS11565 344cf0c559325cbe0dadf2740428f5f1 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 74 215 1.2E-15 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RBRH_RS11565 344cf0c559325cbe0dadf2740428f5f1 584 SUPERFAMILY SSF56601 185 571 1.13E-85 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS11565 344cf0c559325cbe0dadf2740428f5f1 584 Gene3D G3DSA:3.40.710.10 240 563 5.0E-81 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS05390 d6292a0472a4511c9a94fc15bfcfebdb 261 Gene3D G3DSA:3.40.190.10 26 114 1.1E-40 T 23-04-2016 RBRH_RS05390 d6292a0472a4511c9a94fc15bfcfebdb 261 Gene3D G3DSA:3.40.190.10 216 258 1.1E-40 T 23-04-2016 RBRH_RS05390 d6292a0472a4511c9a94fc15bfcfebdb 261 Gene3D G3DSA:3.40.190.10 116 212 1.4E-30 T 23-04-2016 RBRH_RS05390 d6292a0472a4511c9a94fc15bfcfebdb 261 SMART SM00062 28 257 2.9E-66 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RBRH_RS05390 d6292a0472a4511c9a94fc15bfcfebdb 261 PANTHER PTHR18966 29 258 7.0E-83 T 23-04-2016 RBRH_RS05390 d6292a0472a4511c9a94fc15bfcfebdb 261 SUPERFAMILY SSF53850 4 258 1.83E-65 T 23-04-2016 RBRH_RS05390 d6292a0472a4511c9a94fc15bfcfebdb 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 255 2.4E-59 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RBRH_RS05390 d6292a0472a4511c9a94fc15bfcfebdb 261 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 254 4.2E-82 T 23-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 RBRH_RS05390 d6292a0472a4511c9a94fc15bfcfebdb 261 PANTHER PTHR18966:SF237 29 258 7.0E-83 T 23-04-2016 RBRH_RS00520 52ece590ad413c7e40a06c61ef71d886 89 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 80 13.863 T 23-04-2016 RBRH_RS00520 52ece590ad413c7e40a06c61ef71d886 89 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RBRH_RS00520 52ece590ad413c7e40a06c61ef71d886 89 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 80 1.9E-20 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RBRH_RS00520 52ece590ad413c7e40a06c61ef71d886 89 Pfam PF00137 ATP synthase subunit C 14 76 3.5E-10 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RBRH_RS00520 52ece590ad413c7e40a06c61ef71d886 89 SUPERFAMILY SSF81333 8 82 2.22E-18 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RBRH_RS00520 52ece590ad413c7e40a06c61ef71d886 89 Gene3D G3DSA:1.20.20.10 7 82 1.5E-34 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.3E-154 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 PIRSF PIRSF000485 1 483 5.7E-157 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 Pfam PF00156 Phosphoribosyl transferase domain 282 395 1.3E-9 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 PANTHER PTHR11907:SF0 1 480 2.0E-240 T 23-04-2016 RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 44.427 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 Pfam PF13522 Glutamine amidotransferase domain 64 202 1.1E-14 T 23-04-2016 RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 Gene3D G3DSA:3.40.50.2020 273 445 4.6E-46 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 PANTHER PTHR11907 1 480 2.0E-240 T 23-04-2016 RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 SUPERFAMILY SSF53271 252 483 7.88E-69 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 Gene3D G3DSA:3.60.20.10 2 259 3.7E-57 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS08735 c0907e3228491b5cd9256c29477540b5 511 SUPERFAMILY SSF56235 2 259 1.12E-66 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS01500 47a7badf2ecaec396b198aa5b9e59a0a 166 SUPERFAMILY SSF52833 1 163 7.14E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS01500 47a7badf2ecaec396b198aa5b9e59a0a 166 PANTHER PTHR10681 3 166 7.5E-47 T 23-04-2016 RBRH_RS01500 47a7badf2ecaec396b198aa5b9e59a0a 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 23-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 RBRH_RS01500 47a7badf2ecaec396b198aa5b9e59a0a 166 Pfam PF08534 Redoxin 20 162 1.4E-25 T 23-04-2016 IPR013740 Redoxin GO:0016491 RBRH_RS01500 47a7badf2ecaec396b198aa5b9e59a0a 166 Gene3D G3DSA:3.40.30.10 3 166 5.6E-46 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS01500 47a7badf2ecaec396b198aa5b9e59a0a 166 PANTHER PTHR10681:SF81 3 166 7.5E-47 T 23-04-2016 RBRH_RS01500 47a7badf2ecaec396b198aa5b9e59a0a 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 38.131 T 23-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 RBRH_RS02340 f56f68fe9e2fd45319907947d59f7f97 392 PANTHER PTHR30482:SF10 24 367 3.1E-110 T 23-04-2016 RBRH_RS02340 f56f68fe9e2fd45319907947d59f7f97 392 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 358 2.9E-48 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RBRH_RS02340 f56f68fe9e2fd45319907947d59f7f97 392 PANTHER PTHR30482 24 367 3.1E-110 T 23-04-2016 RBRH_RS05710 9a5b8fe4bd1810dbf81fc3253c0783bb 159 Pfam PF13411 MerR HTH family regulatory protein 12 78 7.1E-18 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05710 9a5b8fe4bd1810dbf81fc3253c0783bb 159 Gene3D G3DSA:1.10.1660.10 65 140 6.7E-10 T 23-04-2016 RBRH_RS05710 9a5b8fe4bd1810dbf81fc3253c0783bb 159 SMART SM00422 11 79 4.6E-20 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05710 9a5b8fe4bd1810dbf81fc3253c0783bb 159 PANTHER PTHR30204:SF26 3 121 1.6E-22 T 23-04-2016 RBRH_RS05710 9a5b8fe4bd1810dbf81fc3253c0783bb 159 Gene3D G3DSA:1.10.1660.10 11 64 2.3E-22 T 23-04-2016 RBRH_RS05710 9a5b8fe4bd1810dbf81fc3253c0783bb 159 PANTHER PTHR30204 3 121 1.6E-22 T 23-04-2016 RBRH_RS05710 9a5b8fe4bd1810dbf81fc3253c0783bb 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 8.9E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05710 9a5b8fe4bd1810dbf81fc3253c0783bb 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 23 36 8.9E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05710 9a5b8fe4bd1810dbf81fc3253c0783bb 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 12 23 8.9E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS05710 9a5b8fe4bd1810dbf81fc3253c0783bb 159 SUPERFAMILY SSF46955 12 133 3.66E-23 T 23-04-2016 IPR009061 Putative DNA-binding domain RBRH_RS10740 82632c6ad6d0ca29083bed8d5a65753c 246 PANTHER PTHR30085 1 244 1.3E-131 T 23-04-2016 RBRH_RS10740 82632c6ad6d0ca29083bed8d5a65753c 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 238 2.3E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS10740 82632c6ad6d0ca29083bed8d5a65753c 246 SUPERFAMILY SSF161098 25 223 2.62E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS10740 82632c6ad6d0ca29083bed8d5a65753c 246 Gene3D G3DSA:1.10.3720.10 24 237 3.4E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS10740 82632c6ad6d0ca29083bed8d5a65753c 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 132 2.5E-18 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RBRH_RS10740 82632c6ad6d0ca29083bed8d5a65753c 246 PANTHER PTHR30085:SF4 1 244 1.3E-131 T 23-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 132 5.0E-40 T 23-04-2016 RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 PANTHER PTHR32039 1 510 9.2E-212 T 23-04-2016 RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 Gene3D G3DSA:3.40.50.300 197 396 5.3E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 Pfam PF01078 Magnesium chelatase, subunit ChlI 198 403 3.0E-92 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 SUPERFAMILY SSF52540 197 508 6.58E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 412 504 6.8E-27 T 23-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 SMART SM00382 218 400 3.3E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 SUPERFAMILY SSF54211 15 175 1.44E-25 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 Gene3D G3DSA:3.30.230.10 18 173 1.4E-19 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 217 232 5.8E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 325 338 5.8E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 297 311 5.8E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 504 2.3E-162 T 23-04-2016 IPR004482 Mg chelatase-related protein RBRH_RS11330 c6ec7995cae98d4ae509e3b0968e977d 510 PANTHER PTHR32039:SF7 1 510 9.2E-212 T 23-04-2016 IPR004482 Mg chelatase-related protein RBRH_RS12080 f74a6dcacb9f6fd6b96faf273707182d 228 SMART SM00448 2 114 1.6E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS12080 f74a6dcacb9f6fd6b96faf273707182d 228 Gene3D G3DSA:1.10.10.60 173 220 4.6E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS12080 f74a6dcacb9f6fd6b96faf273707182d 228 PANTHER PTHR32071 4 118 6.1E-38 T 23-04-2016 RBRH_RS12080 f74a6dcacb9f6fd6b96faf273707182d 228 SUPERFAMILY SSF46689 162 220 3.0E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS12080 f74a6dcacb9f6fd6b96faf273707182d 228 Gene3D G3DSA:3.40.50.2300 1 120 4.5E-35 T 23-04-2016 RBRH_RS12080 f74a6dcacb9f6fd6b96faf273707182d 228 SUPERFAMILY SSF52172 1 120 2.28E-37 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS12080 f74a6dcacb9f6fd6b96faf273707182d 228 Pfam PF02954 Bacterial regulatory protein, Fis family 179 218 1.3E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RBRH_RS12080 f74a6dcacb9f6fd6b96faf273707182d 228 PANTHER PTHR32071:SF17 4 118 6.1E-38 T 23-04-2016 RBRH_RS12080 f74a6dcacb9f6fd6b96faf273707182d 228 Pfam PF00072 Response regulator receiver domain 4 114 3.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS01050 c0aff56573f30b679b2eadb469ecb9a4 335 Gene3D G3DSA:3.90.550.10 12 247 1.3E-41 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS01050 c0aff56573f30b679b2eadb469ecb9a4 335 PANTHER PTHR22916 9 296 5.8E-29 T 23-04-2016 RBRH_RS01050 c0aff56573f30b679b2eadb469ecb9a4 335 Pfam PF00535 Glycosyl transferase family 2 14 141 1.1E-24 T 23-04-2016 IPR001173 Glycosyltransferase 2-like RBRH_RS01050 c0aff56573f30b679b2eadb469ecb9a4 335 SUPERFAMILY SSF53448 9 260 1.22E-47 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS16310 083db559dd038d0ad9de638d16c11ea9 122 SUPERFAMILY SSF52172 2 48 2.78E-9 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS16310 083db559dd038d0ad9de638d16c11ea9 122 SUPERFAMILY SSF46894 49 122 4.25E-11 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RBRH_RS16310 083db559dd038d0ad9de638d16c11ea9 122 Gene3D G3DSA:1.10.10.10 55 122 5.9E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS16310 083db559dd038d0ad9de638d16c11ea9 122 Pfam PF00486 Transcriptional regulatory protein, C terminal 74 122 1.5E-6 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS16310 083db559dd038d0ad9de638d16c11ea9 122 PANTHER PTHR26402:SF405 1 122 3.9E-19 T 23-04-2016 RBRH_RS16310 083db559dd038d0ad9de638d16c11ea9 122 PANTHER PTHR26402 1 122 3.9E-19 T 23-04-2016 RBRH_RS16310 083db559dd038d0ad9de638d16c11ea9 122 Gene3D G3DSA:3.40.50.2300 2 48 4.1E-8 T 23-04-2016 RBRH_RS00150 3d6ce39db55b3d1d9c3e65ca5f428d85 53 SUPERFAMILY SSF48295 3 42 1.05E-6 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RBRH_RS00150 3d6ce39db55b3d1d9c3e65ca5f428d85 53 PANTHER PTHR33215 1 41 1.2E-17 T 23-04-2016 RBRH_RS00150 3d6ce39db55b3d1d9c3e65ca5f428d85 53 PANTHER PTHR33215:SF2 1 41 1.2E-17 T 23-04-2016 RBRH_RS04855 b4cd0fb971db3c15b4054c5dfd82a4fb 192 Gene3D G3DSA:2.30.30.220 2 104 1.3E-48 T 23-04-2016 IPR007481 Stringent starvation protein B RBRH_RS04855 b4cd0fb971db3c15b4054c5dfd82a4fb 192 Pfam PF04386 Stringent starvation protein B 5 192 2.3E-37 T 23-04-2016 IPR007481 Stringent starvation protein B RBRH_RS04855 b4cd0fb971db3c15b4054c5dfd82a4fb 192 PANTHER PTHR37486 1 134 1.8E-44 T 23-04-2016 RBRH_RS04855 b4cd0fb971db3c15b4054c5dfd82a4fb 192 PANTHER PTHR37486:SF1 1 134 1.8E-44 T 23-04-2016 RBRH_RS04855 b4cd0fb971db3c15b4054c5dfd82a4fb 192 SUPERFAMILY SSF101738 2 106 1.57E-45 T 23-04-2016 IPR007481 Stringent starvation protein B RBRH_RS06295 97cec6f5e5298bcd152b8a97b47c3376 177 Gene3D G3DSA:1.20.1260.10 31 161 1.4E-6 T 23-04-2016 IPR012347 Ferritin-related RBRH_RS06295 97cec6f5e5298bcd152b8a97b47c3376 177 Pfam PF13628 Domain of unknown function (DUF4142) 36 169 6.2E-36 T 23-04-2016 IPR025419 Domain of unknown function DUF4142 RBRH_RS04580 679056b68b4a6862549c80bd185f3e35 111 SMART SM01219 1 108 1.3E-51 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RBRH_RS04580 679056b68b4a6862549c80bd185f3e35 111 SUPERFAMILY SSF55387 1 107 1.92E-34 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RBRH_RS04580 679056b68b4a6862549c80bd185f3e35 111 ProSitePatterns PS01344 Frataxin family signature. 52 66 - T 23-04-2016 IPR020895 Frataxin conserved site RBRH_RS04580 679056b68b4a6862549c80bd185f3e35 111 PANTHER PTHR16821 1 107 4.7E-29 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RBRH_RS04580 679056b68b4a6862549c80bd185f3e35 111 Hamap MF_00142 Protein CyaY [cyaY]. 1 107 25.729 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RBRH_RS04580 679056b68b4a6862549c80bd185f3e35 111 Gene3D G3DSA:3.30.920.10 1 107 1.9E-32 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RBRH_RS04580 679056b68b4a6862549c80bd185f3e35 111 Pfam PF01491 Frataxin-like domain 1 104 5.0E-28 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RBRH_RS04580 679056b68b4a6862549c80bd185f3e35 111 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 106 2.3E-37 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 Gene3D G3DSA:3.20.20.70 3 330 3.3E-148 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 247 263 4.4E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 155 174 4.4E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 302 321 4.4E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 193 212 4.4E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 124 138 4.4E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 272 287 4.4E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 SUPERFAMILY SSF51569 3 330 2.34E-142 T 23-04-2016 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 SMART SM01004 4 328 4.1E-235 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 PANTHER PTHR11458 3 332 4.4E-176 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 Pfam PF00490 Delta-aminolevulinic acid dehydratase 7 326 6.7E-137 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 247 259 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS04545 62989c894b7a0402f8c3fab14602e981 333 PIRSF PIRSF001415 1 331 4.6E-146 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 SUPERFAMILY SSF55681 112 295 2.99E-104 T 23-04-2016 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 SUPERFAMILY SSF55681 433 594 2.99E-104 T 23-04-2016 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 PANTHER PTHR22594 374 580 2.8E-243 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 PANTHER PTHR22594 1 300 2.8E-243 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 Pfam PF01336 OB-fold nucleic acid binding domain 20 104 1.9E-17 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 Pfam PF02938 GAD domain 311 410 1.2E-25 T 23-04-2016 IPR029351 GAD domain RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 Gene3D G3DSA:3.30.930.10 416 593 7.5E-112 T 23-04-2016 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 Gene3D G3DSA:3.30.930.10 134 279 7.5E-112 T 23-04-2016 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 SUPERFAMILY SSF55261 294 419 4.58E-42 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 567 8.5E-107 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 527 541 1.3E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 1.3E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 1.3E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 483 499 1.3E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 591 1.2E-244 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 SUPERFAMILY SSF50249 3 107 1.83E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 Gene3D G3DSA:2.40.50.140 3 108 3.9E-37 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 PANTHER PTHR22594:SF5 374 580 2.8E-243 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 PANTHER PTHR22594:SF5 1 300 2.8E-243 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 3 572 36.14 T 23-04-2016 RBRH_RS10820 4fc678aad25f0fd59b0fb7637c11eeeb 600 Gene3D G3DSA:3.30.1360.30 280 415 5.7E-44 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RBRH_RS10220 887d43f5de40b83481621c421d8f2f85 64 Pfam PF10276 Zinc-finger domain 31 53 2.5E-7 T 23-04-2016 IPR019401 Zinc finger, CHCC-type RBRH_RS10220 887d43f5de40b83481621c421d8f2f85 64 Gene3D G3DSA:2.60.260.40 9 60 1.1E-17 T 23-04-2016 IPR019401 Zinc finger, CHCC-type RBRH_RS06805 57f0c9e3f3ed9582a09aaea570695bc2 377 SUPERFAMILY SSF51395 1 369 4.23E-119 T 23-04-2016 RBRH_RS06805 57f0c9e3f3ed9582a09aaea570695bc2 377 Gene3D G3DSA:3.20.20.70 4 365 4.3E-125 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS06805 57f0c9e3f3ed9582a09aaea570695bc2 377 PANTHER PTHR22893 6 375 8.0E-204 T 23-04-2016 RBRH_RS06805 57f0c9e3f3ed9582a09aaea570695bc2 377 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 344 1.8E-81 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RBRH_RS06805 57f0c9e3f3ed9582a09aaea570695bc2 377 PANTHER PTHR22893:SF24 6 375 8.0E-204 T 23-04-2016 RBRH_RS08895 dce26ace22fd8ab1564ac380ccfdc626 230 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 208 1.6E-5 T 23-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 RBRH_RS12120 88cbdb08b42a9a480c2d489e96289f6f 125 Pfam PF00085 Thioredoxin 16 81 2.4E-9 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 RBRH_RS12120 88cbdb08b42a9a480c2d489e96289f6f 125 Gene3D G3DSA:3.40.30.10 18 80 1.1E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS12120 88cbdb08b42a9a480c2d489e96289f6f 125 SUPERFAMILY SSF52833 17 80 9.71E-13 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS02000 34c17932fe87397336d6cbcb0d70a971 161 PANTHER PTHR30476 1 161 6.5E-72 T 23-04-2016 RBRH_RS02000 34c17932fe87397336d6cbcb0d70a971 161 Gene3D G3DSA:3.30.70.990 9 94 4.0E-32 T 23-04-2016 RBRH_RS02000 34c17932fe87397336d6cbcb0d70a971 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 27.762 T 23-04-2016 IPR007551 Protein of unknown function DUF520 RBRH_RS02000 34c17932fe87397336d6cbcb0d70a971 161 PANTHER PTHR30476:SF0 1 161 6.5E-72 T 23-04-2016 RBRH_RS02000 34c17932fe87397336d6cbcb0d70a971 161 Gene3D G3DSA:3.30.70.860 95 161 1.1E-31 T 23-04-2016 RBRH_RS02000 34c17932fe87397336d6cbcb0d70a971 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 9.2E-65 T 23-04-2016 IPR007551 Protein of unknown function DUF520 RBRH_RS02000 34c17932fe87397336d6cbcb0d70a971 161 SUPERFAMILY SSF89963 2 87 7.59E-31 T 23-04-2016 IPR007551 Protein of unknown function DUF520 RBRH_RS02000 34c17932fe87397336d6cbcb0d70a971 161 SUPERFAMILY SSF89963 89 161 6.54E-27 T 23-04-2016 IPR007551 Protein of unknown function DUF520 RBRH_RS09180 bb345e331996c56409a1602028ebbd7d 251 Pfam PF13972 Bacterial transcriptional repressor 62 209 2.6E-43 T 23-04-2016 IPR025722 Bacterial transcriptional repressor TetR RBRH_RS09180 bb345e331996c56409a1602028ebbd7d 251 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 4.3E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS09180 bb345e331996c56409a1602028ebbd7d 251 Gene3D G3DSA:1.10.357.10 6 203 9.6E-29 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RBRH_RS09180 bb345e331996c56409a1602028ebbd7d 251 PANTHER PTHR30055 3 168 1.8E-37 T 23-04-2016 RBRH_RS09180 bb345e331996c56409a1602028ebbd7d 251 PANTHER PTHR30055:SF30 3 168 1.8E-37 T 23-04-2016 RBRH_RS09180 bb345e331996c56409a1602028ebbd7d 251 SUPERFAMILY SSF46689 5 79 6.67E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS09180 bb345e331996c56409a1602028ebbd7d 251 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.2E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS09180 bb345e331996c56409a1602028ebbd7d 251 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.2E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS02350 682a628f12618ce9d00d2d1250cb2a87 238 PIRSF PIRSF039137 1 238 9.5E-108 T 23-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 RBRH_RS02350 682a628f12618ce9d00d2d1250cb2a87 238 PANTHER PTHR24220 7 238 1.8E-120 T 23-04-2016 RBRH_RS02350 682a628f12618ce9d00d2d1250cb2a87 238 SMART SM00382 30 217 1.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS02350 682a628f12618ce9d00d2d1250cb2a87 238 SUPERFAMILY SSF52540 5 236 2.44E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02350 682a628f12618ce9d00d2d1250cb2a87 238 Pfam PF00005 ABC transporter 22 166 7.9E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS02350 682a628f12618ce9d00d2d1250cb2a87 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS02350 682a628f12618ce9d00d2d1250cb2a87 238 Gene3D G3DSA:3.40.50.300 3 234 1.3E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02350 682a628f12618ce9d00d2d1250cb2a87 238 PANTHER PTHR24220:SF568 7 238 1.8E-120 T 23-04-2016 RBRH_RS06285 870476e46e7fa5d6006dcc15e60da659 341 PANTHER PTHR21716:SF13 1 341 7.4E-90 T 23-04-2016 RBRH_RS06285 870476e46e7fa5d6006dcc15e60da659 341 Pfam PF01594 Domain of unknown function DUF20 14 338 1.9E-46 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like RBRH_RS06285 870476e46e7fa5d6006dcc15e60da659 341 PANTHER PTHR21716 1 341 7.4E-90 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like RBRH_RS10140 e84db2a5add8d217572ce02ee966c592 120 PANTHER PTHR34310:SF3 5 117 7.9E-41 T 23-04-2016 RBRH_RS10140 e84db2a5add8d217572ce02ee966c592 120 PANTHER PTHR34310 5 117 7.9E-41 T 23-04-2016 RBRH_RS10140 e84db2a5add8d217572ce02ee966c592 120 Pfam PF04248 Domain of unknown function (DUF427) 19 111 3.7E-31 T 23-04-2016 IPR007361 Domain of unknown function DUF427 RBRH_RS02325 1545da1b0ae04d1c379a09d3afc40a12 317 PANTHER PTHR30426 10 315 4.1E-154 T 23-04-2016 RBRH_RS02325 1545da1b0ae04d1c379a09d3afc40a12 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 10 289 2.5E-99 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RBRH_RS02325 1545da1b0ae04d1c379a09d3afc40a12 317 Pfam PF02401 LytB protein 11 287 4.7E-91 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RBRH_RS02325 1545da1b0ae04d1c379a09d3afc40a12 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 9 291 37.559 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RBRH_RS04550 916562b2328ab8a1b1109dbb5cfbea0d 222 Gene3D G3DSA:3.40.50.300 17 204 2.2E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04550 916562b2328ab8a1b1109dbb5cfbea0d 222 Pfam PF01926 50S ribosome-binding GTPase 26 148 1.7E-18 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS04550 916562b2328ab8a1b1109dbb5cfbea0d 222 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 204 26.015 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RBRH_RS04550 916562b2328ab8a1b1109dbb5cfbea0d 222 SUPERFAMILY SSF52540 19 204 1.21E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04550 916562b2328ab8a1b1109dbb5cfbea0d 222 PANTHER PTHR11649 25 194 1.3E-39 T 23-04-2016 RBRH_RS04550 916562b2328ab8a1b1109dbb5cfbea0d 222 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 200 1.4E-63 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RBRH_RS06495 0b00b22a1c8784361a76552228110148 154 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 3.2E-59 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RBRH_RS06495 0b00b22a1c8784361a76552228110148 154 SUPERFAMILY SSF54637 10 151 1.34E-44 T 23-04-2016 IPR029069 HotDog domain RBRH_RS06495 0b00b22a1c8784361a76552228110148 154 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 34.844 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RBRH_RS06495 0b00b22a1c8784361a76552228110148 154 Gene3D G3DSA:3.10.129.10 5 148 7.3E-54 T 23-04-2016 IPR029069 HotDog domain RBRH_RS06495 0b00b22a1c8784361a76552228110148 154 PANTHER PTHR30272 8 151 2.8E-70 T 23-04-2016 RBRH_RS06495 0b00b22a1c8784361a76552228110148 154 Pfam PF07977 FabA-like domain 17 141 8.7E-35 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RBRH_RS05845 5ad2db15af5e08bd6ad4ab5c5bc5e93f 382 Gene3D G3DSA:3.30.930.10 17 313 4.0E-60 T 23-04-2016 RBRH_RS05845 5ad2db15af5e08bd6ad4ab5c5bc5e93f 382 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 364 33.38 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 RBRH_RS05845 5ad2db15af5e08bd6ad4ab5c5bc5e93f 382 PANTHER PTHR11476 12 316 8.4E-43 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RBRH_RS05845 5ad2db15af5e08bd6ad4ab5c5bc5e93f 382 PANTHER PTHR11476:SF5 12 316 8.4E-43 T 23-04-2016 RBRH_RS05845 5ad2db15af5e08bd6ad4ab5c5bc5e93f 382 PIRSF PIRSF001549 6 350 6.9E-37 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RBRH_RS05845 5ad2db15af5e08bd6ad4ab5c5bc5e93f 382 Pfam PF13393 Histidyl-tRNA synthetase 10 313 1.4E-111 T 23-04-2016 RBRH_RS05845 5ad2db15af5e08bd6ad4ab5c5bc5e93f 382 SUPERFAMILY SSF55681 5 310 5.88E-55 T 23-04-2016 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 SMART SM00387 324 440 1.2E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 SUPERFAMILY SSF47384 196 278 1.04E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 Pfam PF08521 Two-component sensor kinase N-terminal 17 135 1.3E-4 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 6.4E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 6.4E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 6.4E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 PANTHER PTHR24423 1 10 1.1E-75 T 23-04-2016 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 PANTHER PTHR24423 151 436 1.1E-75 T 23-04-2016 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 Pfam PF00672 HAMP domain 142 208 1.0E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 435 8.9E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 278 2.8E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 Gene3D G3DSA:3.30.565.10 286 437 8.8E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 SUPERFAMILY SSF55874 268 437 1.44E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 SMART SM00388 213 278 2.7E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 PANTHER PTHR24423:SF474 1 10 1.1E-75 T 23-04-2016 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 PANTHER PTHR24423:SF474 151 436 1.1E-75 T 23-04-2016 RBRH_RS10150 3f929f915a4bcd4df2e0d4b63502f120 454 Gene3D G3DSA:1.10.287.130 204 274 1.0E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 SUPERFAMILY SSF56601 397 705 5.14E-113 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 SUPERFAMILY SSF56601 284 338 5.14E-113 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 SUPERFAMILY SSF56601 232 254 5.14E-113 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 Gene3D G3DSA:3.40.710.10 252 338 2.4E-115 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 Gene3D G3DSA:3.40.710.10 395 708 2.4E-115 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 Pfam PF00905 Penicillin binding protein transpeptidase domain 405 639 4.8E-32 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 PANTHER PTHR32282:SF5 34 333 3.8E-176 T 23-04-2016 RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 PANTHER PTHR32282:SF5 396 814 3.8E-176 T 23-04-2016 RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 PANTHER PTHR32282 34 333 3.8E-176 T 23-04-2016 RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 PANTHER PTHR32282 396 814 3.8E-176 T 23-04-2016 RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 Gene3D G3DSA:1.10.3810.10 75 251 3.8E-67 T 23-04-2016 RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 SUPERFAMILY SSF53955 64 273 2.33E-67 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS06730 7bba618133fdb57c31d98da0121c241e 872 Pfam PF00912 Transglycosylase 75 250 1.2E-58 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.1E-45 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 PANTHER PTHR18866 1 449 4.3E-282 T 23-04-2016 RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 Gene3D G3DSA:3.40.50.20 1 129 4.7E-52 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.1E-38 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 SUPERFAMILY SSF51246 331 444 3.98E-43 T 23-04-2016 IPR011054 Rudiment single hybrid motif RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 Gene3D G3DSA:3.30.1490.20 130 203 5.7E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 SMART SM00878 336 441 5.4E-65 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.4E-79 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 SUPERFAMILY SSF52440 1 113 5.4E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.3E-222 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 Gene3D G3DSA:3.30.470.20 204 444 3.3E-95 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RBRH_RS01510 e663b4a73302bdfebe220624e96df855 455 SUPERFAMILY SSF56059 83 348 1.71E-69 T 23-04-2016 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 SUPERFAMILY SSF56176 18 207 3.0E-42 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 Gene3D G3DSA:3.30.465.10 87 249 5.9E-55 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 225 349 7.5E-35 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 Gene3D G3DSA:3.30.43.10 18 82 3.0E-16 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 Gene3D G3DSA:3.90.78.10 250 349 5.8E-43 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 PANTHER PTHR21071:SF6 1 349 6.1E-149 T 23-04-2016 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 Pfam PF01565 FAD binding domain 39 165 1.3E-20 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 SUPERFAMILY SSF56194 222 348 6.8E-47 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 20 345 1.2E-69 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 PANTHER PTHR21071 1 349 6.1E-149 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS02005 b3a44912a05e01fd82f57f454e633194 349 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 349 81.652 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS03555 59468fa8096fa48eddeb8b85eeb46bcf 149 PANTHER PTHR10642 4 143 7.0E-56 T 23-04-2016 RBRH_RS03555 59468fa8096fa48eddeb8b85eeb46bcf 149 Pfam PF00075 RNase H 7 143 1.7E-49 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 RBRH_RS03555 59468fa8096fa48eddeb8b85eeb46bcf 149 Gene3D G3DSA:3.30.420.10 7 145 5.8E-60 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS03555 59468fa8096fa48eddeb8b85eeb46bcf 149 SUPERFAMILY SSF53098 6 143 1.06E-57 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS03555 59468fa8096fa48eddeb8b85eeb46bcf 149 Hamap MF_00042 Ribonuclease H [rnhA]. 4 149 33.799 T 23-04-2016 IPR022892 Ribonuclease H GO:0004523 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 PANTHER PTHR23083 43 282 5.0E-20 T 23-04-2016 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 PANTHER PTHR23083 335 353 5.0E-20 T 23-04-2016 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 SMART SM00028 180 213 0.0063 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 SMART SM00028 70 103 54.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 SMART SM00028 36 69 19.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 SMART SM00028 214 247 270.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 Pfam PF13432 Tetratricopeptide repeat 43 90 3.0E-5 T 23-04-2016 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 Pfam PF13432 Tetratricopeptide repeat 185 224 6.0E-5 T 23-04-2016 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 Gene3D G3DSA:1.25.40.10 42 312 1.2E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 SUPERFAMILY SSF81901 40 247 4.97E-15 T 23-04-2016 RBRH_RS02985 a0db6f43fe87b92695398330b7aaea96 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 386 35.102 T 23-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 19 58 2.6E-6 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1256 1286 2.3 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 79 118 2.6E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 398 432 0.032 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1007 1043 0.4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 134 163 0.45 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 233 268 0.091 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 39 78 4.1E-6 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 64 97 0.0042 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 172 204 1.5 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 Pfam PF13332 Haemagluttinin repeat 1229 1295 0.0015 T 23-04-2016 IPR025157 Haemagluttinin repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 Pfam PF13332 Haemagluttinin repeat 1457 1626 9.7E-40 T 23-04-2016 IPR025157 Haemagluttinin repeat RBRH_RS07400 32af5483badfaf7c0c078ebcd179c118 2296 Pfam PF13332 Haemagluttinin repeat 1159 1215 0.0025 T 23-04-2016 IPR025157 Haemagluttinin repeat RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 SMART SM00535 18 146 7.0E-51 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 Pfam PF00035 Double-stranded RNA binding motif 153 219 4.3E-11 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 Gene3D G3DSA:3.30.160.20 150 219 2.7E-24 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 29.199 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 SUPERFAMILY SSF69065 3 155 6.8E-47 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 PANTHER PTHR11207 2 218 2.6E-79 T 23-04-2016 RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 SUPERFAMILY SSF54768 106 220 3.3E-25 T 23-04-2016 RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 Gene3D G3DSA:1.10.1520.10 3 145 2.9E-48 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 SMART SM00358 153 221 2.3E-15 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 Pfam PF14622 Ribonuclease-III-like 16 138 3.8E-36 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RBRH_RS03375 8a2a56bdcaa4746e870de9ab30455353 343 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 6 219 4.6E-71 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RBRH_RS03715 c5b6e5ac7df610f85fb8110bb5e70105 129 Gene3D G3DSA:2.60.120.10 24 84 2.0E-8 T 23-04-2016 IPR014710 RmlC-like jelly roll fold RBRH_RS03715 c5b6e5ac7df610f85fb8110bb5e70105 129 PANTHER PTHR13903 32 129 1.5E-24 T 23-04-2016 IPR012093 Pirin RBRH_RS03715 c5b6e5ac7df610f85fb8110bb5e70105 129 Pfam PF05726 Pirin C-terminal cupin domain 23 114 4.0E-21 T 23-04-2016 IPR008778 Pirin, C-terminal domain RBRH_RS03715 c5b6e5ac7df610f85fb8110bb5e70105 129 PANTHER PTHR13903:SF4 32 129 1.5E-24 T 23-04-2016 RBRH_RS03715 c5b6e5ac7df610f85fb8110bb5e70105 129 SUPERFAMILY SSF51182 21 125 2.22E-18 T 23-04-2016 IPR011051 RmlC-like cupin domain RBRH_RS03620 f8976ff2eba4d7d5936b0df1ef98b127 298 Gene3D G3DSA:3.20.20.20 25 287 1.5E-110 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 RBRH_RS03620 f8976ff2eba4d7d5936b0df1ef98b127 298 SUPERFAMILY SSF51717 16 287 2.62E-104 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RBRH_RS03620 f8976ff2eba4d7d5936b0df1ef98b127 298 PANTHER PTHR20941:SF1 26 290 2.4E-118 T 23-04-2016 RBRH_RS03620 f8976ff2eba4d7d5936b0df1ef98b127 298 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 64 77 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 RBRH_RS03620 f8976ff2eba4d7d5936b0df1ef98b127 298 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 30 285 8.8E-97 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 RBRH_RS03620 f8976ff2eba4d7d5936b0df1ef98b127 298 PANTHER PTHR20941 26 290 2.4E-118 T 23-04-2016 RBRH_RS03620 f8976ff2eba4d7d5936b0df1ef98b127 298 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 30 45 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 RBRH_RS03620 f8976ff2eba4d7d5936b0df1ef98b127 298 Pfam PF00809 Pterin binding enzyme 31 270 1.3E-85 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 RBRH_RS06235 4ccea780f37f691cd7dfa411d0cf0294 412 SUPERFAMILY SSF111369 195 267 1.05E-6 T 23-04-2016 RBRH_RS06235 4ccea780f37f691cd7dfa411d0cf0294 412 PANTHER PTHR30386:SF6 17 376 4.3E-164 T 23-04-2016 RBRH_RS06235 4ccea780f37f691cd7dfa411d0cf0294 412 Gene3D G3DSA:2.40.50.100 215 248 2.0E-18 T 23-04-2016 RBRH_RS06235 4ccea780f37f691cd7dfa411d0cf0294 412 Gene3D G3DSA:2.40.50.100 61 94 2.0E-18 T 23-04-2016 RBRH_RS06235 4ccea780f37f691cd7dfa411d0cf0294 412 SUPERFAMILY SSF111369 119 183 4.58E-6 T 23-04-2016 RBRH_RS06235 4ccea780f37f691cd7dfa411d0cf0294 412 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 289 1.4E-14 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RBRH_RS06235 4ccea780f37f691cd7dfa411d0cf0294 412 PANTHER PTHR30386 17 376 4.3E-164 T 23-04-2016 RBRH_RS06235 4ccea780f37f691cd7dfa411d0cf0294 412 SUPERFAMILY SSF111369 60 114 6.93E-8 T 23-04-2016 RBRH_RS06235 4ccea780f37f691cd7dfa411d0cf0294 412 Pfam PF00529 HlyD membrane-fusion protein of T1SS 182 345 1.7E-13 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RBRH_RS11730 e774d053988abe69b8e3cdf5c5f00cd1 232 SUPERFAMILY SSF53474 6 232 6.37E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS11730 e774d053988abe69b8e3cdf5c5f00cd1 232 PANTHER PTHR17630 17 232 9.4E-47 T 23-04-2016 RBRH_RS11730 e774d053988abe69b8e3cdf5c5f00cd1 232 Pfam PF01738 Dienelactone hydrolase family 17 231 7.7E-56 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RBRH_RS11730 e774d053988abe69b8e3cdf5c5f00cd1 232 Gene3D G3DSA:3.40.50.1820 6 232 4.3E-56 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS06270 174eb9480f3fcf0e503262116151d777 365 SUPERFAMILY SSF52540 45 181 3.82E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06270 174eb9480f3fcf0e503262116151d777 365 Pfam PF03969 AFG1-like ATPase 3 354 7.1E-126 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RBRH_RS06270 174eb9480f3fcf0e503262116151d777 365 PANTHER PTHR12169 1 358 1.6E-147 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RBRH_RS06270 174eb9480f3fcf0e503262116151d777 365 PANTHER PTHR12169:SF11 1 358 1.6E-147 T 23-04-2016 RBRH_RS06270 174eb9480f3fcf0e503262116151d777 365 Gene3D G3DSA:3.40.50.300 15 167 7.9E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01755 1f1fbbf2303d36ab5fa0ab192f69b3b5 240 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 39 195 9.4E-44 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RBRH_RS01755 1f1fbbf2303d36ab5fa0ab192f69b3b5 240 Gene3D G3DSA:3.40.50.10610 28 203 4.6E-24 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RBRH_RS01755 1f1fbbf2303d36ab5fa0ab192f69b3b5 240 SUPERFAMILY SSF159594 37 202 3.66E-34 T 23-04-2016 RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 SUPERFAMILY SSF47823 17 111 1.28E-28 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 PANTHER PTHR30349 18 307 2.0E-104 T 23-04-2016 RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 Gene3D G3DSA:1.10.443.10 124 299 5.3E-57 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 16 308 29.868 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 20 101 6.2E-19 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 Gene3D G3DSA:1.10.150.130 18 110 2.2E-24 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 PANTHER PTHR30349:SF5 18 307 2.0E-104 T 23-04-2016 RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 22 307 1.7E-110 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 Pfam PF00589 Phage integrase family 124 293 3.7E-51 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 16 308 59.83 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RBRH_RS01965 9766364a7f957b6e4e5eae3508753b4c 308 SUPERFAMILY SSF56349 118 305 5.0E-57 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RBRH_RS09570 6ea3c827886c08301706f7132d2d5d6b 167 Gene3D G3DSA:3.90.280.10 3 166 1.0E-53 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RBRH_RS09570 6ea3c827886c08301706f7132d2d5d6b 167 PANTHER PTHR30289 1 167 1.2E-63 T 23-04-2016 RBRH_RS09570 6ea3c827886c08301706f7132d2d5d6b 167 PANTHER PTHR30289:SF0 1 167 1.2E-63 T 23-04-2016 RBRH_RS09570 6ea3c827886c08301706f7132d2d5d6b 167 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 29 164 4.3E-41 T 23-04-2016 IPR005247 YbhB/YbcL RBRH_RS09570 6ea3c827886c08301706f7132d2d5d6b 167 Pfam PF01161 Phosphatidylethanolamine-binding protein 28 164 5.7E-36 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RBRH_RS09570 6ea3c827886c08301706f7132d2d5d6b 167 SUPERFAMILY SSF49777 4 166 5.89E-51 T 23-04-2016 IPR008914 Phosphatidylethanolamine-binding protein RBRH_RS02425 e7773d9a6000899831aabd6f86bce0c0 235 PANTHER PTHR21091:SF16 1 210 1.1E-55 T 23-04-2016 RBRH_RS02425 e7773d9a6000899831aabd6f86bce0c0 235 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 232 6.5E-79 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RBRH_RS02425 e7773d9a6000899831aabd6f86bce0c0 235 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 81 114 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RBRH_RS02425 e7773d9a6000899831aabd6f86bce0c0 235 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 209 9.0E-46 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RBRH_RS02425 e7773d9a6000899831aabd6f86bce0c0 235 PANTHER PTHR21091 1 210 1.1E-55 T 23-04-2016 RBRH_RS02425 e7773d9a6000899831aabd6f86bce0c0 235 SUPERFAMILY SSF53790 1 232 9.68E-60 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RBRH_RS02425 e7773d9a6000899831aabd6f86bce0c0 235 Gene3D G3DSA:3.40.1010.10 1 116 3.4E-40 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RBRH_RS02425 e7773d9a6000899831aabd6f86bce0c0 235 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RBRH_RS02425 e7773d9a6000899831aabd6f86bce0c0 235 Gene3D G3DSA:3.30.950.10 117 233 4.3E-26 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RBRH_RS09900 bf7576e91478f0ef025c4d36bb50b495 383 Pfam PF13450 NAD(P)-binding Rossmann-like domain 6 74 9.9E-21 T 23-04-2016 RBRH_RS09900 bf7576e91478f0ef025c4d36bb50b495 383 PANTHER PTHR21197 1 383 3.5E-98 T 23-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 RBRH_RS09900 bf7576e91478f0ef025c4d36bb50b495 383 Gene3D G3DSA:3.40.50.720 183 255 1.5E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09900 bf7576e91478f0ef025c4d36bb50b495 383 Gene3D G3DSA:3.40.50.720 322 364 1.5E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09900 bf7576e91478f0ef025c4d36bb50b495 383 Gene3D G3DSA:3.40.50.720 6 80 1.5E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09900 bf7576e91478f0ef025c4d36bb50b495 383 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 4 363 1.8E-95 T 23-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 RBRH_RS09900 bf7576e91478f0ef025c4d36bb50b495 383 SUPERFAMILY SSF51971 332 364 9.42E-50 T 23-04-2016 RBRH_RS09900 bf7576e91478f0ef025c4d36bb50b495 383 SUPERFAMILY SSF51971 2 263 9.42E-50 T 23-04-2016 RBRH_RS09900 bf7576e91478f0ef025c4d36bb50b495 383 Pfam PF03275 UDP-galactopyranose mutase 148 347 4.3E-74 T 23-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 RBRH_RS09900 bf7576e91478f0ef025c4d36bb50b495 383 SUPERFAMILY SSF54373 246 314 8.44E-26 T 23-04-2016 RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 311 332 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 PANTHER PTHR10657 244 538 2.9E-80 T 23-04-2016 RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 PANTHER PTHR10657 1 176 2.9E-80 T 23-04-2016 RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 Pfam PF13624 SurA N-terminal domain 1 166 2.3E-41 T 23-04-2016 RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 Gene3D G3DSA:3.10.50.40 262 396 6.1E-48 T 23-04-2016 RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 SUPERFAMILY SSF109998 42 170 3.69E-29 T 23-04-2016 IPR027304 Trigger factor/SurA domain RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 SUPERFAMILY SSF109998 244 300 3.69E-29 T 23-04-2016 IPR027304 Trigger factor/SurA domain RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 PANTHER PTHR10657:SF11 244 538 2.9E-80 T 23-04-2016 RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 PANTHER PTHR10657:SF11 1 176 2.9E-80 T 23-04-2016 RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 Pfam PF13616 PPIC-type PPIASE domain 255 373 9.7E-35 T 23-04-2016 RBRH_RS07100 047dabea030b959aacfba96a84578c5f 638 SUPERFAMILY SSF54534 262 372 6.08E-34 T 23-04-2016 RBRH_RS06545 f6dfda9beeb78b9fa6fc74016f2fbdca 90 PANTHER PTHR33713 1 85 6.8E-35 T 23-04-2016 RBRH_RS06545 f6dfda9beeb78b9fa6fc74016f2fbdca 90 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 70 1.3E-14 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RBRH_RS06545 f6dfda9beeb78b9fa6fc74016f2fbdca 90 SUPERFAMILY SSF143120 6 81 1.96E-16 T 23-04-2016 RBRH_RS06545 f6dfda9beeb78b9fa6fc74016f2fbdca 90 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 9 59 1.8E-6 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RBRH_RS06545 f6dfda9beeb78b9fa6fc74016f2fbdca 90 PANTHER PTHR33713:SF2 1 85 6.8E-35 T 23-04-2016 RBRH_RS06545 f6dfda9beeb78b9fa6fc74016f2fbdca 90 Gene3D G3DSA:3.40.1620.10 7 52 4.6E-7 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RBRH_RS11170 a6e031ce3558a0cda8ae16fa7c1d39ce 267 Pfam PF03180 NLPA lipoprotein 29 267 3.9E-89 T 23-04-2016 IPR004872 Lipoprotein NlpA family RBRH_RS11170 a6e031ce3558a0cda8ae16fa7c1d39ce 267 SUPERFAMILY SSF53850 29 267 1.03E-83 T 23-04-2016 RBRH_RS11170 a6e031ce3558a0cda8ae16fa7c1d39ce 267 Gene3D G3DSA:3.40.190.10 29 156 1.3E-54 T 23-04-2016 RBRH_RS11170 a6e031ce3558a0cda8ae16fa7c1d39ce 267 PIRSF PIRSF002854 1 267 1.8E-98 T 23-04-2016 IPR004872 Lipoprotein NlpA family RBRH_RS11170 a6e031ce3558a0cda8ae16fa7c1d39ce 267 PANTHER PTHR30429 1 267 1.4E-114 T 23-04-2016 IPR004872 Lipoprotein NlpA family RBRH_RS11170 a6e031ce3558a0cda8ae16fa7c1d39ce 267 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 28 265 1.7E-72 T 23-04-2016 IPR004872 Lipoprotein NlpA family RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 Pfam PF02817 e3 binding domain 127 161 7.2E-12 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 SUPERFAMILY SSF51230 2 96 1.06E-24 T 23-04-2016 IPR011053 Single hybrid motif RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 SUPERFAMILY SSF52777 204 433 5.34E-90 T 23-04-2016 RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 PANTHER PTHR23151:SF47 204 434 3.3E-217 T 23-04-2016 RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 PANTHER PTHR23151:SF47 3 185 3.3E-217 T 23-04-2016 RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 SUPERFAMILY SSF47005 121 163 3.14E-9 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 204 432 3.0E-81 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 Gene3D G3DSA:4.10.320.10 126 172 2.1E-14 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 Pfam PF00364 Biotin-requiring enzyme 5 77 2.2E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 433 4.5E-169 T 23-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 Gene3D G3DSA:3.30.559.10 202 432 1.3E-92 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 Gene3D G3DSA:2.40.50.100 2 97 1.7E-26 T 23-04-2016 RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 PANTHER PTHR23151 204 434 3.3E-217 T 23-04-2016 RBRH_RS06260 c687595586a967e93b23cbb2c8f9860b 434 PANTHER PTHR23151 3 185 3.3E-217 T 23-04-2016 RBRH_RS05775 6dee852794dd1a9b091b90d79d5fde1d 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 22 225 1.7E-41 T 23-04-2016 RBRH_RS05775 6dee852794dd1a9b091b90d79d5fde1d 233 PANTHER PTHR23291 22 231 5.6E-42 T 23-04-2016 IPR006214 Bax inhibitor 1-related RBRH_RS05775 6dee852794dd1a9b091b90d79d5fde1d 233 PANTHER PTHR23291:SF37 22 231 5.6E-42 T 23-04-2016 RBRH_RS08655 4f6c6a3fd2280fb6e943ff39ad67d6d0 236 Gene3D G3DSA:3.40.50.1860 102 203 4.1E-19 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS08655 4f6c6a3fd2280fb6e943ff39ad67d6d0 236 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 23-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS08655 4f6c6a3fd2280fb6e943ff39ad67d6d0 236 SUPERFAMILY SSF53681 1 102 5.45E-21 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS08655 4f6c6a3fd2280fb6e943ff39ad67d6d0 236 Gene3D G3DSA:3.40.50.1860 1 101 2.3E-27 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS08655 4f6c6a3fd2280fb6e943ff39ad67d6d0 236 Pfam PF01177 Asp/Glu/Hydantoin racemase 1 212 1.6E-49 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS08655 4f6c6a3fd2280fb6e943ff39ad67d6d0 236 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 23-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS08655 4f6c6a3fd2280fb6e943ff39ad67d6d0 236 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 214 7.1E-35 T 23-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 RBRH_RS08655 4f6c6a3fd2280fb6e943ff39ad67d6d0 236 SUPERFAMILY SSF53681 112 215 3.27E-18 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS08655 4f6c6a3fd2280fb6e943ff39ad67d6d0 236 PANTHER PTHR21198 1 222 6.3E-26 T 23-04-2016 RBRH_RS08655 4f6c6a3fd2280fb6e943ff39ad67d6d0 236 PANTHER PTHR21198:SF6 1 222 6.3E-26 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SUPERFAMILY SSF52047 113 478 2.22E-76 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Pfam PF13516 Leucine Rich repeat 394 415 0.002 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Pfam PF13516 Leucine Rich repeat 510 531 1.1E-4 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Pfam PF13516 Leucine Rich repeat 163 184 0.0081 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Pfam PF13516 Leucine Rich repeat 452 473 0.0018 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Pfam PF13516 Leucine Rich repeat 279 300 7.8E-5 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Pfam PF13516 Leucine Rich repeat 191 212 0.027 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Pfam PF13516 Leucine Rich repeat 338 356 0.76 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Pfam PF13516 Leucine Rich repeat 481 501 0.64 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Pfam PF13516 Leucine Rich repeat 539 558 0.002 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Pfam PF13516 Leucine Rich repeat 425 440 0.015 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SUPERFAMILY SSF52047 510 587 9.16E-11 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 249 276 0.08 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 162 189 0.17 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 336 363 0.013 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 423 450 0.52 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 481 508 7.6 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 278 305 0.0013 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 394 421 0.47 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 452 479 0.001 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 220 247 2.3 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 365 392 0.41 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 191 218 0.018 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 307 334 0.24 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 510 537 3.7 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 SMART SM00368 539 566 0.8 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Gene3D G3DSA:3.80.10.10 150 262 1.9E-24 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 Gene3D G3DSA:3.80.10.10 263 591 1.9E-76 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 PANTHER PTHR24106 380 531 3.4E-86 T 23-04-2016 RBRH_RS05970 8fdf4eeec0412ad26cad7c6fc87f1ca3 601 PANTHER PTHR24106 156 350 3.4E-86 T 23-04-2016 RBRH_RS14885 0f79e6b6b033434892bc6f867c542ce5 459 PANTHER PTHR30001:SF1 8 459 2.2E-274 T 23-04-2016 RBRH_RS14885 0f79e6b6b033434892bc6f867c542ce5 459 SUPERFAMILY SSF50249 48 133 7.16E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS14885 0f79e6b6b033434892bc6f867c542ce5 459 Gene3D G3DSA:2.40.50.140 40 133 2.0E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS14885 0f79e6b6b033434892bc6f867c542ce5 459 SMART SM00316 46 127 4.9E-10 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS14885 0f79e6b6b033434892bc6f867c542ce5 459 Pfam PF10150 Ribonuclease E/G family 129 398 1.5E-93 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RBRH_RS14885 0f79e6b6b033434892bc6f867c542ce5 459 PANTHER PTHR30001 8 459 2.2E-274 T 23-04-2016 RBRH_RS14885 0f79e6b6b033434892bc6f867c542ce5 459 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 22 432 4.8E-159 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RBRH_RS14885 0f79e6b6b033434892bc6f867c542ce5 459 Pfam PF00575 S1 RNA binding domain 45 126 7.6E-12 T 23-04-2016 IPR003029 S1 domain GO:0003676 RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 133 1.2E-10 T 23-04-2016 RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 6.2E-38 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 PANTHER PTHR10073 11 710 4.3E-154 T 23-04-2016 RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 Gene3D G3DSA:3.30.230.10 207 329 1.5E-37 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 SUPERFAMILY SSF54211 195 330 8.34E-36 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 SMART SM01340 212 330 6.3E-57 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 SUPERFAMILY SSF118116 522 712 3.4E-56 T 23-04-2016 RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 SUPERFAMILY SSF55874 11 206 1.83E-50 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 Gene3D G3DSA:3.30.565.10 10 206 2.6E-70 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 Pfam PF08676 MutL C terminal dimerisation domain 523 670 6.1E-45 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 SMART SM00853 527 670 1.8E-48 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 9 710 28.062 T 23-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 10 310 3.8E-91 T 23-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 RBRH_RS01935 7a5c7a5b08b1be4c437655ae1b015e9c 714 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 101 107 - T 23-04-2016 IPR014762 DNA mismatch repair, conserved site RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 10 80 3.0E-34 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 PANTHER PTHR10744 11 89 9.3E-37 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 SUPERFAMILY SSF50249 10 88 1.29E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 2.9E-13 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 2.9E-13 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 2.9E-13 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 10 80 5.4E-36 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 Pfam PF00366 Ribosomal protein S17 15 81 1.5E-31 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 8 86 24.705 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 Gene3D G3DSA:2.40.50.140 10 87 6.3E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04440 aa39fce13f71004192f8554462aa41ff 90 ProSitePatterns PS00056 Ribosomal protein S17 signature. 61 73 - T 23-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS10735 2d3d930ea5ea6e6aaa3b19debc96fe7e 225 SUPERFAMILY SSF161098 14 209 7.72E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS10735 2d3d930ea5ea6e6aaa3b19debc96fe7e 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 6.4E-25 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RBRH_RS10735 2d3d930ea5ea6e6aaa3b19debc96fe7e 225 Gene3D G3DSA:1.10.3720.10 13 223 5.3E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS10735 2d3d930ea5ea6e6aaa3b19debc96fe7e 225 PANTHER PTHR30614:SF1 1 225 7.3E-121 T 23-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 RBRH_RS10735 2d3d930ea5ea6e6aaa3b19debc96fe7e 225 PANTHER PTHR30614 1 225 7.3E-121 T 23-04-2016 RBRH_RS10735 2d3d930ea5ea6e6aaa3b19debc96fe7e 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 224 9.6E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 SUPERFAMILY SSF46785 6 111 1.79E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 Gene3D G3DSA:1.10.10.10 6 88 8.8E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 SUPERFAMILY SSF53850 88 294 2.31E-34 T 23-04-2016 RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 Gene3D G3DSA:3.40.190.10 89 181 3.5E-14 T 23-04-2016 RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 9.5E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 Pfam PF03466 LysR substrate binding domain 88 292 2.4E-32 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 Gene3D G3DSA:3.40.190.10 182 252 3.2E-15 T 23-04-2016 RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 PANTHER PTHR30126 1 294 1.9E-138 T 23-04-2016 RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 PANTHER PTHR30126:SF25 1 294 1.9E-138 T 23-04-2016 RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.6E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.6E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS00270 7ff356f0404491431253286c502e71d4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.6E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS11385 91289899c19a33fab9544213845fe7ad 226 Gene3D G3DSA:3.40.50.10610 20 208 4.9E-40 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RBRH_RS11385 91289899c19a33fab9544213845fe7ad 226 SUPERFAMILY SSF159594 55 208 2.33E-31 T 23-04-2016 RBRH_RS11385 91289899c19a33fab9544213845fe7ad 226 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 51 202 4.0E-12 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RBRH_RS06025 68be38636970da0f861130231ccab689 298 Pfam PF01522 Polysaccharide deacetylase 15 170 8.1E-8 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RBRH_RS06025 68be38636970da0f861130231ccab689 298 SUPERFAMILY SSF88713 15 41 1.7E-22 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RBRH_RS06025 68be38636970da0f861130231ccab689 298 SUPERFAMILY SSF88713 86 252 1.7E-22 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RBRH_RS06025 68be38636970da0f861130231ccab689 298 Gene3D G3DSA:3.20.20.370 14 38 1.4E-23 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RBRH_RS06025 68be38636970da0f861130231ccab689 298 Gene3D G3DSA:3.20.20.370 86 268 1.4E-23 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 SUPERFAMILY SSF55874 362 449 4.98E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 SUPERFAMILY SSF55874 484 555 4.98E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PANTHER PTHR24423 475 554 4.8E-44 T 23-04-2016 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PANTHER PTHR24423 104 142 4.8E-44 T 23-04-2016 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PANTHER PTHR24423 29 46 4.8E-44 T 23-04-2016 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PANTHER PTHR24423 334 445 4.8E-44 T 23-04-2016 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PANTHER PTHR24423 262 311 4.8E-44 T 23-04-2016 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 SMART SM00387 412 557 2.1E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 Pfam PF05227 CHASE3 domain 35 171 3.6E-13 T 23-04-2016 IPR007891 CHASE3 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 555 2.2E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 Gene3D G3DSA:3.30.565.10 371 432 1.6E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 Gene3D G3DSA:3.30.565.10 468 557 1.6E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 Gene3D G3DSA:1.10.287.130 275 367 6.1E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 6.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 535 6.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 499 6.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PANTHER PTHR24423:SF383 475 554 4.8E-44 T 23-04-2016 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PANTHER PTHR24423:SF383 104 142 4.8E-44 T 23-04-2016 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PANTHER PTHR24423:SF383 29 46 4.8E-44 T 23-04-2016 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PANTHER PTHR24423:SF383 334 445 4.8E-44 T 23-04-2016 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 PANTHER PTHR24423:SF383 262 311 4.8E-44 T 23-04-2016 RBRH_RS07575 eab3eb57e31a85a2c7a7b8e728015668 624 SUPERFAMILY SSF47384 269 368 1.65E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 SUPERFAMILY SSF52518 2 194 2.36E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 SUPERFAMILY SSF52518 238 375 2.36E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 PANTHER PTHR11624 236 630 0.0 T 23-04-2016 IPR033247 Transketolase family RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 PANTHER PTHR11624 18 213 0.0 T 23-04-2016 IPR033247 Transketolase family RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 Gene3D G3DSA:3.40.50.970 19 196 8.8E-79 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 Gene3D G3DSA:3.40.50.970 237 327 8.8E-79 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 Pfam PF02780 Transketolase, C-terminal domain 501 610 4.5E-24 T 23-04-2016 IPR033248 Transketolase, C-terminal domain RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 SUPERFAMILY SSF52922 486 618 7.98E-30 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 SUPERFAMILY SSF52518 311 496 1.81E-60 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 Pfam PF02779 Transketolase, pyrimidine binding domain 312 472 5.8E-41 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 6 618 4.6E-263 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 Gene3D G3DSA:3.40.50.970 328 489 3.6E-38 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 277 8.5E-122 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 SMART SM00861 313 477 6.8E-73 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 ProSitePatterns PS00801 Transketolase signature 1. 30 49 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 4 619 46.636 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 ProSitePatterns PS00802 Transketolase signature 2. 419 435 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 Gene3D G3DSA:3.40.50.920 490 618 7.0E-34 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 PANTHER PTHR11624:SF20 236 630 0.0 T 23-04-2016 RBRH_RS04160 ff68c241721d72927b664d24412ee09e 637 PANTHER PTHR11624:SF20 18 213 0.0 T 23-04-2016 RBRH_RS00920 41c5784c078c55c3eebbb6d73d10871f 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.2E-13 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS00920 41c5784c078c55c3eebbb6d73d10871f 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.2E-13 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS00920 41c5784c078c55c3eebbb6d73d10871f 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.2E-13 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS00920 41c5784c078c55c3eebbb6d73d10871f 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.2E-13 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS00920 41c5784c078c55c3eebbb6d73d10871f 70 Pfam PF01165 Ribosomal protein S21 3 56 9.2E-19 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS00920 41c5784c078c55c3eebbb6d73d10871f 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 42 4.0E-8 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS00920 41c5784c078c55c3eebbb6d73d10871f 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.084 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS00920 41c5784c078c55c3eebbb6d73d10871f 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.6E-21 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RBRH_RS00920 41c5784c078c55c3eebbb6d73d10871f 70 PANTHER PTHR21109 1 60 2.4E-17 T 23-04-2016 RBRH_RS08155 9b161541e4a4f2ee50730e6a05835795 209 Gene3D G3DSA:3.90.870.10 2 203 4.1E-63 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RBRH_RS08155 9b161541e4a4f2ee50730e6a05835795 209 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 1.4E-60 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 RBRH_RS08155 9b161541e4a4f2ee50730e6a05835795 209 PANTHER PTHR17490 1 205 4.4E-83 T 23-04-2016 RBRH_RS08155 9b161541e4a4f2ee50730e6a05835795 209 SUPERFAMILY SSF55821 1 204 3.36E-63 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RBRH_RS08155 9b161541e4a4f2ee50730e6a05835795 209 PANTHER PTHR17490:SF7 1 205 4.4E-83 T 23-04-2016 RBRH_RS08155 9b161541e4a4f2ee50730e6a05835795 209 Pfam PF01300 Telomere recombination 23 198 1.8E-45 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 RBRH_RS08635 f2f4d577c448f9de5e2693f107fd70bd 563 Gene3D G3DSA:3.30.420.40 1 78 1.8E-4 T 23-04-2016 RBRH_RS08635 f2f4d577c448f9de5e2693f107fd70bd 563 Pfam PF02543 Carbamoyltransferase N-terminus 2 341 2.2E-62 T 23-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 RBRH_RS08635 f2f4d577c448f9de5e2693f107fd70bd 563 SUPERFAMILY SSF53067 1 87 3.24E-15 T 23-04-2016 RBRH_RS08635 f2f4d577c448f9de5e2693f107fd70bd 563 SUPERFAMILY SSF53067 130 345 3.24E-15 T 23-04-2016 RBRH_RS08635 f2f4d577c448f9de5e2693f107fd70bd 563 Pfam PF16861 Carbamoyltransferase C-terminus 392 561 4.3E-68 T 23-04-2016 IPR031730 Carbamoyltransferase, C-terminal RBRH_RS08635 f2f4d577c448f9de5e2693f107fd70bd 563 PANTHER PTHR34847 1 563 1.7E-109 T 23-04-2016 RBRH_RS15505 248f9c0b1f526ce81aedfb30a9883a20 89 PANTHER PTHR30572 2 89 6.3E-13 T 23-04-2016 RBRH_RS15505 248f9c0b1f526ce81aedfb30a9883a20 89 PANTHER PTHR30572:SF3 2 89 6.3E-13 T 23-04-2016 RBRH_RS15505 248f9c0b1f526ce81aedfb30a9883a20 89 SUPERFAMILY SSF111369 5 86 3.79E-7 T 23-04-2016 RBRH_RS15505 248f9c0b1f526ce81aedfb30a9883a20 89 Pfam PF13533 Biotin-lipoyl like 2 32 2.9E-6 T 23-04-2016 RBRH_RS10255 1bec35c4893488487b6192b6cd56dcf9 601 Pfam PF04932 O-Antigen ligase 212 370 1.0E-13 T 23-04-2016 IPR007016 O-antigen ligase-related RBRH_RS10255 1bec35c4893488487b6192b6cd56dcf9 601 Pfam PF15864 Protein glycosylation ligase 169 193 2.8E-10 T 23-04-2016 IPR031726 Protein glycosylation ligase domain RBRH_RS10255 1bec35c4893488487b6192b6cd56dcf9 601 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 392 559 1.6E-47 T 23-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal RBRH_RS06155 77c3cbc0259984c4dd757a35f8552a20 239 Pfam PF02698 DUF218 domain 65 226 1.4E-27 T 23-04-2016 IPR003848 Domain of unknown function DUF218 RBRH_RS06155 77c3cbc0259984c4dd757a35f8552a20 239 PANTHER PTHR30336:SF1 1 227 3.0E-32 T 23-04-2016 RBRH_RS06155 77c3cbc0259984c4dd757a35f8552a20 239 PANTHER PTHR30336 1 227 3.0E-32 T 23-04-2016 RBRH_RS06155 77c3cbc0259984c4dd757a35f8552a20 239 Gene3D G3DSA:3.40.50.620 65 202 4.8E-25 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS11405 764197958109dfd0d6434db5e048e1c2 330 SUPERFAMILY SSF50037 261 304 3.52E-8 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal RBRH_RS11405 764197958109dfd0d6434db5e048e1c2 330 Gene3D G3DSA:2.30.30.100 257 306 2.0E-15 T 23-04-2016 RBRH_RS11405 764197958109dfd0d6434db5e048e1c2 330 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 52 304 2.8E-41 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RBRH_RS11405 764197958109dfd0d6434db5e048e1c2 330 Gene3D G3DSA:3.30.930.10 38 254 3.4E-48 T 23-04-2016 RBRH_RS11405 764197958109dfd0d6434db5e048e1c2 330 SUPERFAMILY SSF55681 40 254 4.8E-43 T 23-04-2016 RBRH_RS11405 764197958109dfd0d6434db5e048e1c2 330 Pfam PF03099 Biotin/lipoate A/B protein ligase family 76 183 2.5E-11 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RBRH_RS11405 764197958109dfd0d6434db5e048e1c2 330 Pfam PF02237 Biotin protein ligase C terminal domain 259 304 3.2E-8 T 23-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 RBRH_RS11405 764197958109dfd0d6434db5e048e1c2 330 PANTHER PTHR12835 34 314 8.2E-50 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RBRH_RS00850 3a2890c0bdf5d6d667fc9214cf69dc9c 97 PANTHER PTHR33803:SF1 3 86 7.4E-19 T 23-04-2016 RBRH_RS00850 3a2890c0bdf5d6d667fc9214cf69dc9c 97 PANTHER PTHR33803 3 86 7.4E-19 T 23-04-2016 RBRH_RS12040 41b6ecfed63089aa39025bf4eeb5f3f5 244 Pfam PF06508 Queuosine biosynthesis protein QueC 10 232 4.5E-69 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RBRH_RS12040 41b6ecfed63089aa39025bf4eeb5f3f5 244 PIRSF PIRSF006293 6 242 2.4E-71 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RBRH_RS12040 41b6ecfed63089aa39025bf4eeb5f3f5 244 PANTHER PTHR11587 10 230 1.3E-72 T 23-04-2016 RBRH_RS12040 41b6ecfed63089aa39025bf4eeb5f3f5 244 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 10 226 3.1E-57 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RBRH_RS12040 41b6ecfed63089aa39025bf4eeb5f3f5 244 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 239 48.363 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RBRH_RS12040 41b6ecfed63089aa39025bf4eeb5f3f5 244 PANTHER PTHR11587:SF3 10 230 1.3E-72 T 23-04-2016 RBRH_RS12040 41b6ecfed63089aa39025bf4eeb5f3f5 244 SUPERFAMILY SSF52402 10 232 1.39E-50 T 23-04-2016 RBRH_RS12040 41b6ecfed63089aa39025bf4eeb5f3f5 244 Gene3D G3DSA:3.40.50.620 9 233 1.6E-72 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS10715 f91e61940f18b4c921a9d330f357db4c 302 Pfam PF11227 Protein of unknown function (DUF3025) 64 295 1.6E-80 T 23-04-2016 IPR021390 Protein of unknown function DUF3025 RBRH_RS10495 7a389399310e4781f30037c23915829f 87 PANTHER PTHR33609 1 86 8.0E-41 T 23-04-2016 RBRH_RS10495 7a389399310e4781f30037c23915829f 87 Pfam PF01527 Transposase 2 70 1.7E-22 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS10495 7a389399310e4781f30037c23915829f 87 Gene3D G3DSA:1.10.10.60 7 82 9.4E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS10495 7a389399310e4781f30037c23915829f 87 SUPERFAMILY SSF46689 1 68 2.87E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS02845 0113f2bfe49e54af0be1082d9cafb69c 172 SUPERFAMILY SSF158442 15 157 1.31E-33 T 23-04-2016 RBRH_RS02845 0113f2bfe49e54af0be1082d9cafb69c 172 Gene3D G3DSA:1.20.1550.10 5 167 7.8E-49 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain RBRH_RS02845 0113f2bfe49e54af0be1082d9cafb69c 172 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 6 166 18.426 T 23-04-2016 IPR022920 Disulphide bond formation protein DsbB RBRH_RS02845 0113f2bfe49e54af0be1082d9cafb69c 172 PANTHER PTHR36570 1 171 2.1E-19 T 23-04-2016 RBRH_RS02845 0113f2bfe49e54af0be1082d9cafb69c 172 Pfam PF02600 Disulfide bond formation protein DsbB 11 156 7.6E-36 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 SUPERFAMILY SSF50621 263 416 5.02E-54 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PANTHER PTHR11482:SF5 9 419 9.1E-164 T 23-04-2016 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PANTHER PTHR11482 9 419 9.1E-164 T 23-04-2016 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 SUPERFAMILY SSF51419 27 286 4.71E-81 T 23-04-2016 IPR029066 PLP-binding barrel RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 302 320 8.6E-29 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 8.6E-29 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 8.6E-29 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 383 405 8.6E-29 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 416 41.423 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 Gene3D G3DSA:3.20.20.10 37 269 1.3E-82 T 23-04-2016 IPR029066 PLP-binding barrel RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 284 3.8E-72 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 373 386 2.2E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.2E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.2E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.2E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 274 293 2.2E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 290 392 2.8E-17 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 Gene3D G3DSA:2.40.37.10 270 417 2.4E-50 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RBRH_RS04570 f02fd63bd3aef591edc09614fe6d4e72 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 415 2.3E-160 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 PANTHER PTHR10359 9 209 2.3E-85 T 23-04-2016 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.5E-9 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 PANTHER PTHR10359:SF18 9 209 2.3E-85 T 23-04-2016 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 Gene3D G3DSA:1.10.340.30 22 122 1.9E-35 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 SMART SM00478 38 185 2.9E-56 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 8.9E-20 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.32 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.5E-83 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 SUPERFAMILY SSF48150 3 207 5.5E-71 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 Gene3D G3DSA:1.10.1670.10 123 208 4.7E-34 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RBRH_RS09375 3de61d5839e45906665e5e57ed20dfbc 214 PIRSF PIRSF001435 1 211 7.7E-53 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RBRH_RS01110 b2a23aba6f42658dbbb6056629a1ffde 795 Pfam PF13953 PapC C-terminal domain 710 772 3.3E-7 T 23-04-2016 IPR025949 PapC-like, C-terminal domain RBRH_RS01110 b2a23aba6f42658dbbb6056629a1ffde 795 Pfam PF13954 PapC N-terminal domain 21 163 1.4E-20 T 23-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 RBRH_RS01110 b2a23aba6f42658dbbb6056629a1ffde 795 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 288 298 - T 23-04-2016 IPR018030 Fimbrial membrane usher, conserved site RBRH_RS01110 b2a23aba6f42658dbbb6056629a1ffde 795 SUPERFAMILY SSF141729 19 145 8.89E-11 T 23-04-2016 RBRH_RS01110 b2a23aba6f42658dbbb6056629a1ffde 795 PANTHER PTHR30451 21 792 2.5E-116 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS01110 b2a23aba6f42658dbbb6056629a1ffde 795 Gene3D G3DSA:2.40.160.10 337 583 5.5E-5 T 23-04-2016 IPR023614 Porin domain RBRH_RS01110 b2a23aba6f42658dbbb6056629a1ffde 795 Pfam PF00577 Outer membrane usher protein 182 701 1.1E-70 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.0E-13 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 Gene3D G3DSA:1.10.10.10 1 82 1.8E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 PANTHER PTHR30126:SF6 1 307 3.5E-149 T 23-04-2016 RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 Gene3D G3DSA:3.40.190.10 185 261 1.1E-28 T 23-04-2016 RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 SUPERFAMILY SSF46785 1 88 1.25E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 PANTHER PTHR30126 1 307 3.5E-149 T 23-04-2016 RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 Gene3D G3DSA:3.40.190.10 90 184 1.8E-21 T 23-04-2016 RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 SUPERFAMILY SSF53850 90 299 4.83E-41 T 23-04-2016 RBRH_RS07585 ced539637ae83404f1524f2bea221eaf 308 Pfam PF03466 LysR substrate binding domain 89 294 1.1E-39 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS05500 613b6927166571221d70721f254f9258 281 Pfam PF03239 Iron permease FTR1 family 3 265 1.5E-24 T 23-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RBRH_RS05500 613b6927166571221d70721f254f9258 281 PANTHER PTHR31632 1 271 3.1E-35 T 23-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RBRH_RS04965 72cb80f3828897cd445c7c769dde3a19 104 SUPERFAMILY SSF52833 1 102 5.49E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS04965 72cb80f3828897cd445c7c769dde3a19 104 PANTHER PTHR10293 1 100 2.1E-64 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related RBRH_RS04965 72cb80f3828897cd445c7c769dde3a19 104 PIRSF PIRSF005894 1 104 2.1E-49 T 23-04-2016 IPR014434 Monothiol glutaredoxin RBRH_RS04965 72cb80f3828897cd445c7c769dde3a19 104 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 3 101 1.1E-46 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related RBRH_RS04965 72cb80f3828897cd445c7c769dde3a19 104 Pfam PF00462 Glutaredoxin 16 81 8.5E-19 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RBRH_RS04965 72cb80f3828897cd445c7c769dde3a19 104 Gene3D G3DSA:3.40.30.10 6 101 2.6E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS01685 42de5f7edf844947e06d6bb41e371aed 166 Pfam PF01202 Shikimate kinase 9 161 1.1E-16 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS01685 42de5f7edf844947e06d6bb41e371aed 166 Gene3D G3DSA:3.40.50.300 1 162 7.1E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01685 42de5f7edf844947e06d6bb41e371aed 166 PANTHER PTHR11603 1 164 5.6E-81 T 23-04-2016 RBRH_RS01685 42de5f7edf844947e06d6bb41e371aed 166 SUPERFAMILY SSF52540 1 161 2.87E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01685 42de5f7edf844947e06d6bb41e371aed 166 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 3 158 9.0E-56 T 23-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 RBRH_RS06210 693bb86c5f7d362fe6db2e3cb43da128 122 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 9 115 3.9E-26 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RBRH_RS06210 693bb86c5f7d362fe6db2e3cb43da128 122 SUPERFAMILY SSF89919 9 114 1.96E-30 T 23-04-2016 IPR023799 Ribosome-binding factor A domain RBRH_RS06210 693bb86c5f7d362fe6db2e3cb43da128 122 Pfam PF02033 Ribosome-binding factor A 10 111 9.4E-29 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RBRH_RS06210 693bb86c5f7d362fe6db2e3cb43da128 122 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 118 20.299 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RBRH_RS06210 693bb86c5f7d362fe6db2e3cb43da128 122 PANTHER PTHR33515 13 122 8.9E-30 T 23-04-2016 RBRH_RS06210 693bb86c5f7d362fe6db2e3cb43da128 122 Gene3D G3DSA:3.30.300.20 9 118 4.7E-36 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RBRH_RS06210 693bb86c5f7d362fe6db2e3cb43da128 122 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 98 1.0E-30 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 630 1.5E-170 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 Pfam PF01131 DNA topoisomerase 152 594 1.6E-116 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 Pfam PF01751 Toprim domain 5 132 4.6E-11 T 23-04-2016 IPR006171 Toprim domain RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 5.1E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 5.1E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 5.1E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 5.1E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 5.1E-27 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 Gene3D G3DSA:1.10.460.10 489 610 6.6E-51 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 Gene3D G3DSA:1.10.460.10 156 214 6.6E-51 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 PANTHER PTHR11390 1 502 3.7E-153 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 PANTHER PTHR11390 519 608 3.7E-153 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 Pfam PF13342 C-terminal repeat of topoisomerase 645 709 3.6E-21 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 Pfam PF13342 C-terminal repeat of topoisomerase 756 816 3.1E-18 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 331 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 SUPERFAMILY SSF56712 3 609 2.88E-172 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 Gene3D G3DSA:2.70.20.10 215 341 7.9E-22 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 Gene3D G3DSA:2.70.20.10 368 486 3.7E-18 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 SMART SM00436 126 221 7.9E-25 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 SMART SM00493 3 126 2.5E-13 T 23-04-2016 IPR006171 Toprim domain RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 PANTHER PTHR11390:SF21 1 502 3.7E-153 T 23-04-2016 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 PANTHER PTHR11390:SF21 519 608 3.7E-153 T 23-04-2016 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 SMART SM00437 279 556 9.9E-71 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RBRH_RS12130 ef141f0bbd903ae1b57b439cc1ddfcd9 892 Gene3D G3DSA:3.40.50.140 4 151 1.0E-42 T 23-04-2016 IPR006171 Toprim domain RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 SMART SM00388 383 448 4.7E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 SUPERFAMILY SSF52172 684 800 4.41E-25 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 Gene3D G3DSA:3.40.50.2300 685 799 3.6E-27 T 23-04-2016 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 SMART SM00448 687 797 5.5E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 Gene3D G3DSA:3.30.565.10 449 609 2.7E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 554 1.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 1.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 568 1.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 1.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 SUPERFAMILY SSF55874 439 612 2.75E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 Pfam PF00072 Response regulator receiver domain 690 796 2.8E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 Gene3D G3DSA:3.30.450.20 134 228 2.2E-4 T 23-04-2016 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 490 609 2.1E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 PANTHER PTHR24423:SF438 367 670 3.3E-98 T 23-04-2016 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 PANTHER PTHR24423:SF438 686 787 3.3E-98 T 23-04-2016 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 SUPERFAMILY SSF47384 378 445 4.9E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 PANTHER PTHR24423 367 670 3.3E-98 T 23-04-2016 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 PANTHER PTHR24423 686 787 3.3E-98 T 23-04-2016 RBRH_RS06130 71e329f28cd6c6798408e76707b21509 801 SMART SM00387 489 611 2.1E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS08845 2b876c3f4cb5efba6a73c76efc85b8ab 327 Gene3D G3DSA:3.40.50.720 6 154 1.2E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS08845 2b876c3f4cb5efba6a73c76efc85b8ab 327 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 158 321 4.0E-32 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RBRH_RS08845 2b876c3f4cb5efba6a73c76efc85b8ab 327 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 326 55.944 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RBRH_RS08845 2b876c3f4cb5efba6a73c76efc85b8ab 327 PIRSF PIRSF000102 3 326 1.2E-64 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RBRH_RS08845 2b876c3f4cb5efba6a73c76efc85b8ab 327 Gene3D G3DSA:3.90.110.10 156 326 9.4E-72 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RBRH_RS08845 2b876c3f4cb5efba6a73c76efc85b8ab 327 PANTHER PTHR23382 7 327 2.8E-192 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RBRH_RS08845 2b876c3f4cb5efba6a73c76efc85b8ab 327 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 5 320 3.4E-144 T 23-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RBRH_RS08845 2b876c3f4cb5efba6a73c76efc85b8ab 327 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 153 2.5E-38 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RBRH_RS08845 2b876c3f4cb5efba6a73c76efc85b8ab 327 SUPERFAMILY SSF56327 158 326 1.59E-60 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RBRH_RS08845 2b876c3f4cb5efba6a73c76efc85b8ab 327 SUPERFAMILY SSF51735 6 156 3.04E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS03110 db64ace80db1d84f6986fd8870d2ab15 299 PANTHER PTHR32120 7 294 2.3E-94 T 23-04-2016 RBRH_RS03110 db64ace80db1d84f6986fd8870d2ab15 299 Gene3D G3DSA:3.40.50.300 76 233 3.8E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03110 db64ace80db1d84f6986fd8870d2ab15 299 Gene3D G3DSA:2.40.50.140 6 59 1.0E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS03110 db64ace80db1d84f6986fd8870d2ab15 299 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 5 298 34.394 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RBRH_RS03110 db64ace80db1d84f6986fd8870d2ab15 299 Pfam PF03193 Protein of unknown function, DUF258 62 233 8.8E-48 T 23-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 RBRH_RS03110 db64ace80db1d84f6986fd8870d2ab15 299 Gene3D G3DSA:1.10.40.50 235 296 2.1E-23 T 23-04-2016 RBRH_RS03110 db64ace80db1d84f6986fd8870d2ab15 299 SUPERFAMILY SSF52540 77 294 4.89E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03110 db64ace80db1d84f6986fd8870d2ab15 299 SUPERFAMILY SSF50249 6 60 1.8E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS03110 db64ace80db1d84f6986fd8870d2ab15 299 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 40 291 7.7E-65 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RBRH_RS08330 c304114f7097577a28a397c50a2c2be4 389 PANTHER PTHR21581:SF8 141 382 2.3E-97 T 23-04-2016 RBRH_RS08330 c304114f7097577a28a397c50a2c2be4 389 SUPERFAMILY SSF56601 134 371 8.77E-59 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS08330 c304114f7097577a28a397c50a2c2be4 389 SUPERFAMILY SSF56601 28 47 8.77E-59 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS08330 c304114f7097577a28a397c50a2c2be4 389 PANTHER PTHR21581 141 382 2.3E-97 T 23-04-2016 RBRH_RS08330 c304114f7097577a28a397c50a2c2be4 389 Gene3D G3DSA:3.40.710.10 133 371 8.1E-70 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS08330 c304114f7097577a28a397c50a2c2be4 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 135 354 5.8E-60 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RBRH_RS08330 c304114f7097577a28a397c50a2c2be4 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 239 252 2.5E-12 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RBRH_RS08330 c304114f7097577a28a397c50a2c2be4 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 212 229 2.5E-12 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RBRH_RS08330 c304114f7097577a28a397c50a2c2be4 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 162 173 2.5E-12 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 SUPERFAMILY SSF110921 394 502 1.83E-26 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 SMART SM00917 371 503 2.0E-38 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 PANTHER PTHR10277 1 511 7.8E-240 T 23-04-2016 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 500 2.3E-212 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 Gene3D G3DSA:3.20.20.70 1 347 3.7E-145 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 502 1.2E-33 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 PANTHER PTHR10277:SF9 1 511 7.8E-240 T 23-04-2016 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 SUPERFAMILY SSF51569 2 292 2.56E-96 T 23-04-2016 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 Pfam PF00682 HMGL-like 5 274 3.3E-98 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 512 42.195 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS09125 539975f110a4410bf3cff55c347177b8 514 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RBRH_RS08700 425d5c06eee5e5d8b352ef8404af970a 69 Pfam PF01361 Tautomerase enzyme 2 56 6.2E-9 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RBRH_RS08700 425d5c06eee5e5d8b352ef8404af970a 69 SUPERFAMILY SSF55331 2 60 1.83E-11 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily RBRH_RS08700 425d5c06eee5e5d8b352ef8404af970a 69 Gene3D G3DSA:3.30.429.20 1 60 6.5E-17 T 23-04-2016 RBRH_RS06020 dc443eb6d79575e117b5884c0159f802 154 Pfam PF00578 AhpC/TSA family 7 132 1.4E-32 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RBRH_RS06020 dc443eb6d79575e117b5884c0159f802 154 PIRSF PIRSF000239 1 154 4.0E-29 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RBRH_RS06020 dc443eb6d79575e117b5884c0159f802 154 PANTHER PTHR10681 2 154 5.1E-44 T 23-04-2016 RBRH_RS06020 dc443eb6d79575e117b5884c0159f802 154 Gene3D G3DSA:3.40.30.10 4 154 5.1E-46 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS06020 dc443eb6d79575e117b5884c0159f802 154 SUPERFAMILY SSF52833 5 154 1.68E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 SUPERFAMILY SSF48173 205 502 3.53E-114 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 PANTHER PTHR11455:SF18 13 504 1.4E-197 T 23-04-2016 RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 Pfam PF03441 FAD binding domain of DNA photolyase 299 498 1.5E-83 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 Gene3D G3DSA:3.40.50.620 12 154 2.9E-43 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 Gene3D G3DSA:1.25.40.80 217 306 2.0E-38 T 23-04-2016 RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 Gene3D G3DSA:1.25.40.80 155 177 2.0E-38 T 23-04-2016 RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 PRINTS PR00147 DNA photolyase signature 149 165 4.5E-21 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 PRINTS PR00147 DNA photolyase signature 407 421 4.5E-21 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 PRINTS PR00147 DNA photolyase signature 368 386 4.5E-21 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 PRINTS PR00147 DNA photolyase signature 348 364 4.5E-21 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 368 387 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 Gene3D G3DSA:1.10.579.10 307 501 5.8E-79 T 23-04-2016 RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 Pfam PF00875 DNA photolyase 13 175 1.9E-49 T 23-04-2016 IPR006050 DNA photolyase, N-terminal RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 SUPERFAMILY SSF52425 12 222 3.79E-51 T 23-04-2016 IPR006050 DNA photolyase, N-terminal RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 PANTHER PTHR11455 13 504 1.4E-197 T 23-04-2016 RBRH_RS07845 f44607305af5f8055312a2927aea8630 512 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 348 360 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RBRH_RS02310 6a376d9f5c475d863a911f9c88918d71 77 Pfam PF00830 Ribosomal L28 family 3 62 4.9E-28 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RBRH_RS02310 6a376d9f5c475d863a911f9c88918d71 77 PANTHER PTHR13528 1 69 5.2E-34 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RBRH_RS02310 6a376d9f5c475d863a911f9c88918d71 77 SUPERFAMILY SSF143800 2 75 1.08E-30 T 23-04-2016 RBRH_RS02310 6a376d9f5c475d863a911f9c88918d71 77 Gene3D G3DSA:2.30.170.40 2 76 3.6E-37 T 23-04-2016 RBRH_RS02310 6a376d9f5c475d863a911f9c88918d71 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 5.9E-29 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02310 6a376d9f5c475d863a911f9c88918d71 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.961 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS03270 3757efe946ace32fc0c5e6f256872f48 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 180 1.0E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS03270 3757efe946ace32fc0c5e6f256872f48 219 Gene3D G3DSA:3.40.50.1000 76 217 3.2E-39 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS03270 3757efe946ace32fc0c5e6f256872f48 219 PANTHER PTHR18901:SF40 1 215 9.6E-53 T 23-04-2016 RBRH_RS03270 3757efe946ace32fc0c5e6f256872f48 219 PANTHER PTHR18901 1 215 9.6E-53 T 23-04-2016 RBRH_RS03270 3757efe946ace32fc0c5e6f256872f48 219 Gene3D G3DSA:1.10.150.240 23 75 1.8E-6 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RBRH_RS03270 3757efe946ace32fc0c5e6f256872f48 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 2.8E-31 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS03270 3757efe946ace32fc0c5e6f256872f48 219 SUPERFAMILY SSF56784 5 217 1.63E-56 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS07560 4bbe7b3ec693283fbbd3023cab88f43f 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 33 76 3.6E-12 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RBRH_RS07560 4bbe7b3ec693283fbbd3023cab88f43f 153 Gene3D G3DSA:1.20.1290.10 4 147 8.9E-48 T 23-04-2016 IPR029032 AhpD-like RBRH_RS07560 4bbe7b3ec693283fbbd3023cab88f43f 153 SUPERFAMILY SSF69118 9 146 1.03E-41 T 23-04-2016 IPR029032 AhpD-like RBRH_RS07560 4bbe7b3ec693283fbbd3023cab88f43f 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 18 94 1.8E-12 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RBRH_RS10095 e71e47fd46fa328f0925e927f37aa918 316 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS10095 e71e47fd46fa328f0925e927f37aa918 316 PANTHER PTHR24220:SF305 284 309 3.9E-113 T 23-04-2016 RBRH_RS10095 e71e47fd46fa328f0925e927f37aa918 316 PANTHER PTHR24220:SF305 6 266 3.9E-113 T 23-04-2016 RBRH_RS10095 e71e47fd46fa328f0925e927f37aa918 316 SUPERFAMILY SSF52540 3 229 3.18E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10095 e71e47fd46fa328f0925e927f37aa918 316 Pfam PF00005 ABC transporter 21 163 3.3E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS10095 e71e47fd46fa328f0925e927f37aa918 316 SMART SM00382 30 211 1.1E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS10095 e71e47fd46fa328f0925e927f37aa918 316 Gene3D G3DSA:3.40.50.300 2 229 1.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10095 e71e47fd46fa328f0925e927f37aa918 316 PANTHER PTHR24220 284 309 3.9E-113 T 23-04-2016 RBRH_RS10095 e71e47fd46fa328f0925e927f37aa918 316 PANTHER PTHR24220 6 266 3.9E-113 T 23-04-2016 RBRH_RS00990 c380f939e175df1848196724b3817304 307 Pfam PF01171 PP-loop family 48 211 3.0E-16 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RBRH_RS00990 c380f939e175df1848196724b3817304 307 PANTHER PTHR11807 8 280 3.4E-110 T 23-04-2016 RBRH_RS00990 c380f939e175df1848196724b3817304 307 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 17 278 56.239 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 RBRH_RS00990 c380f939e175df1848196724b3817304 307 SUPERFAMILY SSF52402 24 242 2.67E-55 T 23-04-2016 RBRH_RS00990 c380f939e175df1848196724b3817304 307 PANTHER PTHR11807:SF16 8 280 3.4E-110 T 23-04-2016 RBRH_RS00990 c380f939e175df1848196724b3817304 307 PIRSF PIRSF004976 4 281 7.8E-74 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 RBRH_RS00990 c380f939e175df1848196724b3817304 307 Gene3D G3DSA:3.40.50.620 33 213 9.6E-20 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS09420 8c43ed8d557989235059e03accb670a3 201 Pfam PF03352 Methyladenine glycosylase 9 186 1.8E-72 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 RBRH_RS09420 8c43ed8d557989235059e03accb670a3 201 PANTHER PTHR30037 4 201 1.0E-94 T 23-04-2016 RBRH_RS09420 8c43ed8d557989235059e03accb670a3 201 PANTHER PTHR30037:SF4 4 201 1.0E-94 T 23-04-2016 RBRH_RS09420 8c43ed8d557989235059e03accb670a3 201 SUPERFAMILY SSF48150 5 189 6.91E-72 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RBRH_RS09420 8c43ed8d557989235059e03accb670a3 201 Gene3D G3DSA:1.10.340.30 5 187 6.8E-75 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RBRH_RS08695 8bbb63994de63919f4ce9ab95addbf71 268 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 83 257 1.5E-13 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS08695 8bbb63994de63919f4ce9ab95addbf71 268 Gene3D G3DSA:3.90.850.10 1 259 9.3E-88 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS08695 8bbb63994de63919f4ce9ab95addbf71 268 SUPERFAMILY SSF56529 1 259 7.67E-80 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS08695 8bbb63994de63919f4ce9ab95addbf71 268 PANTHER PTHR30143 1 265 2.1E-78 T 23-04-2016 RBRH_RS00175 0890cadf6b21851a3d226a0c28270660 580 Pfam PF00733 Asparagine synthase 233 575 1.5E-14 T 23-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 RBRH_RS00175 0890cadf6b21851a3d226a0c28270660 580 SUPERFAMILY SSF56235 85 199 3.6E-5 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS00175 0890cadf6b21851a3d226a0c28270660 580 Gene3D G3DSA:3.60.20.10 85 190 1.6E-5 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS00175 0890cadf6b21851a3d226a0c28270660 580 SUPERFAMILY SSF52402 214 355 2.93E-18 T 23-04-2016 RBRH_RS00175 0890cadf6b21851a3d226a0c28270660 580 SUPERFAMILY SSF52402 432 569 2.93E-18 T 23-04-2016 RBRH_RS00175 0890cadf6b21851a3d226a0c28270660 580 Gene3D G3DSA:3.40.50.620 439 569 3.4E-18 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS00175 0890cadf6b21851a3d226a0c28270660 580 Gene3D G3DSA:3.40.50.620 211 359 3.4E-18 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS15875 adc1419098c4c3026b649dcd67356d48 142 PANTHER PTHR11806 1 142 2.9E-97 T 23-04-2016 RBRH_RS15875 adc1419098c4c3026b649dcd67356d48 142 SUPERFAMILY SSF51905 112 140 1.37E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS15875 adc1419098c4c3026b649dcd67356d48 142 SUPERFAMILY SSF51905 14 49 1.37E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS15875 adc1419098c4c3026b649dcd67356d48 142 Pfam PF01134 Glucose inhibited division protein A 1 142 3.3E-65 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 RBRH_RS15875 adc1419098c4c3026b649dcd67356d48 142 Gene3D G3DSA:3.50.50.60 89 140 6.7E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS15875 adc1419098c4c3026b649dcd67356d48 142 Gene3D G3DSA:3.50.50.60 9 33 6.7E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS15875 adc1419098c4c3026b649dcd67356d48 142 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 117 140 - T 23-04-2016 IPR020595 MnmG-related, conserved site RBRH_RS15875 adc1419098c4c3026b649dcd67356d48 142 PANTHER PTHR11806:SF0 1 142 2.9E-97 T 23-04-2016 RBRH_RS15875 adc1419098c4c3026b649dcd67356d48 142 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 22 36 - T 23-04-2016 IPR020595 MnmG-related, conserved site RBRH_RS05995 d7a55a67be011f869fc05da0efa77866 462 Pfam PF03796 DnaB-like helicase C terminal domain 196 451 4.7E-116 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 RBRH_RS05995 d7a55a67be011f869fc05da0efa77866 462 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 452 4.3E-172 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RBRH_RS05995 d7a55a67be011f869fc05da0efa77866 462 SUPERFAMILY SSF48024 14 125 6.15E-37 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RBRH_RS05995 d7a55a67be011f869fc05da0efa77866 462 SUPERFAMILY SSF52540 194 443 2.34E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05995 d7a55a67be011f869fc05da0efa77866 462 Pfam PF00772 DnaB-like helicase N terminal domain 16 117 2.5E-34 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RBRH_RS05995 d7a55a67be011f869fc05da0efa77866 462 SMART SM00382 213 411 1.5E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05995 d7a55a67be011f869fc05da0efa77866 462 Gene3D G3DSA:1.10.860.10 16 118 7.5E-37 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RBRH_RS05995 d7a55a67be011f869fc05da0efa77866 462 PANTHER PTHR30153 1 461 1.6E-207 T 23-04-2016 RBRH_RS05995 d7a55a67be011f869fc05da0efa77866 462 Gene3D G3DSA:3.40.50.300 190 453 6.7E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05745 c0909169ae36bd5e1faabc150f02e84b 254 SUPERFAMILY SSF64167 1 248 2.62E-84 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RBRH_RS05745 c0909169ae36bd5e1faabc150f02e84b 254 Pfam PF01975 Survival protein SurE 3 182 1.6E-55 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RBRH_RS05745 c0909169ae36bd5e1faabc150f02e84b 254 Gene3D G3DSA:3.40.1210.10 1 246 1.1E-85 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RBRH_RS05745 c0909169ae36bd5e1faabc150f02e84b 254 PANTHER PTHR30457 1 253 8.9E-87 T 23-04-2016 RBRH_RS05745 c0909169ae36bd5e1faabc150f02e84b 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 5.0E-65 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RBRH_RS05745 c0909169ae36bd5e1faabc150f02e84b 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 250 38.114 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RBRH_RS06975 1e0158234786cfcf2b15c8986479a573 260 PANTHER PTHR10060 1 259 3.3E-117 T 23-04-2016 IPR001130 TatD family GO:0016788 RBRH_RS06975 1e0158234786cfcf2b15c8986479a573 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RBRH_RS06975 1e0158234786cfcf2b15c8986479a573 260 Gene3D G3DSA:3.20.20.140 1 256 7.1E-86 T 23-04-2016 RBRH_RS06975 1e0158234786cfcf2b15c8986479a573 260 Pfam PF01026 TatD related DNase 3 255 6.9E-77 T 23-04-2016 IPR001130 TatD family GO:0016788 RBRH_RS06975 1e0158234786cfcf2b15c8986479a573 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RBRH_RS06975 1e0158234786cfcf2b15c8986479a573 260 PANTHER PTHR10060:SF20 1 259 3.3E-117 T 23-04-2016 RBRH_RS06975 1e0158234786cfcf2b15c8986479a573 260 SUPERFAMILY SSF51556 2 256 4.41E-85 T 23-04-2016 IPR032466 Metal-dependent hydrolase RBRH_RS06975 1e0158234786cfcf2b15c8986479a573 260 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 256 7.5E-85 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 RBRH_RS06975 1e0158234786cfcf2b15c8986479a573 260 PIRSF PIRSF005902 1 260 2.7E-78 T 23-04-2016 IPR001130 TatD family GO:0016788 RBRH_RS02650 407e61736a8bc7579d609f7f441a51a7 259 PANTHER PTHR35562 70 254 1.9E-40 T 23-04-2016 RBRH_RS02650 407e61736a8bc7579d609f7f441a51a7 259 SMART SM00463 170 254 1.6E-14 T 23-04-2016 IPR002625 Smr domain RBRH_RS02650 407e61736a8bc7579d609f7f441a51a7 259 Pfam PF01713 Smr domain 173 253 8.5E-27 T 23-04-2016 IPR002625 Smr domain RBRH_RS02650 407e61736a8bc7579d609f7f441a51a7 259 SUPERFAMILY SSF160443 171 253 3.66E-19 T 23-04-2016 IPR002625 Smr domain RBRH_RS00585 41ef0bf19ad56e8e789913698347901e 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 32 48 5.2E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RBRH_RS00585 41ef0bf19ad56e8e789913698347901e 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 262 280 5.2E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RBRH_RS00585 41ef0bf19ad56e8e789913698347901e 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 97 107 5.2E-6 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RBRH_RS00585 41ef0bf19ad56e8e789913698347901e 383 PANTHER PTHR30483:SF20 11 374 8.8E-88 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RBRH_RS00585 41ef0bf19ad56e8e789913698347901e 383 Gene3D G3DSA:3.40.50.2300 31 232 7.9E-62 T 23-04-2016 RBRH_RS00585 41ef0bf19ad56e8e789913698347901e 383 PANTHER PTHR30483 11 374 8.8E-88 T 23-04-2016 RBRH_RS00585 41ef0bf19ad56e8e789913698347901e 383 SUPERFAMILY SSF53822 30 376 4.24E-91 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RBRH_RS00585 41ef0bf19ad56e8e789913698347901e 383 Pfam PF13458 Periplasmic binding protein 31 372 5.6E-53 T 23-04-2016 IPR028081 Leucine-binding protein domain RBRH_RS08555 d983366b48645e1e3d758d2d8e517b54 157 Gene3D G3DSA:3.10.129.10 15 145 6.0E-52 T 23-04-2016 IPR029069 HotDog domain RBRH_RS08555 d983366b48645e1e3d758d2d8e517b54 157 SUPERFAMILY SSF54637 15 143 1.14E-43 T 23-04-2016 IPR029069 HotDog domain RBRH_RS08555 d983366b48645e1e3d758d2d8e517b54 157 PANTHER PTHR31793:SF9 14 144 4.9E-44 T 23-04-2016 RBRH_RS08555 d983366b48645e1e3d758d2d8e517b54 157 PANTHER PTHR31793 14 144 4.9E-44 T 23-04-2016 RBRH_RS08555 d983366b48645e1e3d758d2d8e517b54 157 Pfam PF03061 Thioesterase superfamily 31 109 2.1E-16 T 23-04-2016 IPR006683 Thioesterase domain RBRH_RS08555 d983366b48645e1e3d758d2d8e517b54 157 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 17 141 1.2E-48 T 23-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- RBRH_RS08555 d983366b48645e1e3d758d2d8e517b54 157 PIRSF PIRSF003230 8 149 1.8E-44 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RBRH_RS08555 d983366b48645e1e3d758d2d8e517b54 157 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 20 135 1.2E-32 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RBRH_RS06630 64b25560c73ebd6bae7c903115ebedae 132 SUPERFAMILY SSF54427 11 124 2.29E-23 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS06630 64b25560c73ebd6bae7c903115ebedae 132 Gene3D G3DSA:3.10.450.50 2 126 1.5E-36 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS06630 64b25560c73ebd6bae7c903115ebedae 132 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 30 124 2.0E-5 T 23-04-2016 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 RBRH_RS06630 64b25560c73ebd6bae7c903115ebedae 132 Pfam PF12680 SnoaL-like domain 11 110 2.8E-10 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 PANTHER PTHR24031 325 339 8.0E-123 T 23-04-2016 RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 PANTHER PTHR24031 686 729 8.0E-123 T 23-04-2016 RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 PANTHER PTHR24031 356 663 8.0E-123 T 23-04-2016 RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 Pfam PF00270 DEAD/DEAH box helicase 347 495 3.4E-18 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 SMART SM00487 322 520 3.1E-27 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 Gene3D G3DSA:3.40.50.300 515 697 2.8E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 SUPERFAMILY SSF52540 513 715 1.62E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 Pfam PF00271 Helicase conserved C-terminal domain 540 648 7.5E-16 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 SUPERFAMILY SSF52540 269 514 4.44E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 85 725 4.0E-215 T 23-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 Gene3D G3DSA:2.40.50.140 98 191 1.4E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 SUPERFAMILY SSF50249 68 223 7.62E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 Pfam PF17191 RecG wedge domain 67 220 5.4E-10 T 23-04-2016 IPR033454 RecG, wedge domain RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 Gene3D G3DSA:3.40.50.300 312 514 5.4E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 PANTHER PTHR24031:SF249 325 339 8.0E-123 T 23-04-2016 RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 PANTHER PTHR24031:SF249 686 729 8.0E-123 T 23-04-2016 RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 PANTHER PTHR24031:SF249 356 663 8.0E-123 T 23-04-2016 RBRH_RS01770 37cd82fe51b3f43d606a54820c7af512 753 SMART SM00490 566 649 1.5E-17 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS07850 4acd35fd1838c7424818d426f0f235de 381 Gene3D G3DSA:1.20.1280.50 64 100 5.2E-6 T 23-04-2016 RBRH_RS07850 4acd35fd1838c7424818d426f0f235de 381 Pfam PF00646 F-box domain 67 100 2.9E-5 T 23-04-2016 IPR001810 F-box domain GO:0005515 RBRH_RS07850 4acd35fd1838c7424818d426f0f235de 381 SUPERFAMILY SSF81383 60 112 1.3E-7 T 23-04-2016 IPR001810 F-box domain GO:0005515 RBRH_RS07850 4acd35fd1838c7424818d426f0f235de 381 SMART SM00256 69 109 3.1E-4 T 23-04-2016 IPR001810 F-box domain GO:0005515 RBRH_RS03360 aa8b73c2f3e34bc4913f2448b47f7612 98 Gene3D G3DSA:3.40.30.10 10 88 5.8E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS03360 aa8b73c2f3e34bc4913f2448b47f7612 98 Pfam PF05768 Glutaredoxin-like domain (DUF836) 11 83 6.4E-15 T 23-04-2016 IPR008554 Glutaredoxin-like RBRH_RS03360 aa8b73c2f3e34bc4913f2448b47f7612 98 SUPERFAMILY SSF52833 9 87 1.07E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS07375 f04423f04cf78fd7e68e53a94838fa02 257 Pfam PF13565 Homeodomain-like domain 34 107 5.8E-12 T 23-04-2016 RBRH_RS07375 f04423f04cf78fd7e68e53a94838fa02 257 SUPERFAMILY SSF46689 6 109 9.86E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS07375 f04423f04cf78fd7e68e53a94838fa02 257 Gene3D G3DSA:1.10.10.60 8 85 4.8E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS07375 f04423f04cf78fd7e68e53a94838fa02 257 Gene3D G3DSA:3.30.420.10 132 233 1.1E-16 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS07375 f04423f04cf78fd7e68e53a94838fa02 257 Pfam PF00665 Integrase core domain 132 232 4.2E-14 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RBRH_RS07375 f04423f04cf78fd7e68e53a94838fa02 257 SUPERFAMILY SSF53098 131 248 3.79E-19 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 PANTHER PTHR10169 1 410 1.1E-151 T 23-04-2016 RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 SMART SM00433 19 410 5.2E-65 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 Gene3D G3DSA:3.30.230.10 219 391 3.9E-74 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 SMART SM00387 15 175 7.3E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 Pfam PF00204 DNA gyrase B 220 389 2.5E-58 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 SUPERFAMILY SSF55874 1 215 1.7E-62 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 16 174 1.9E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 PRINTS PR00418 DNA topoisomerase II family signature 267 280 1.6E-24 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 PRINTS PR00418 DNA topoisomerase II family signature 54 67 1.6E-24 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 PRINTS PR00418 DNA topoisomerase II family signature 101 115 1.6E-24 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 PRINTS PR00418 DNA topoisomerase II family signature 19 34 1.6E-24 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 Gene3D G3DSA:3.30.565.10 1 217 1.1E-87 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS12260 821ff4b142a9ca295a517514ba0fdf9c 410 SUPERFAMILY SSF54211 220 391 1.31E-58 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 PRINTS PR00601 Bacterioferritin signature 3 22 4.2E-66 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 PRINTS PR00601 Bacterioferritin signature 65 85 4.2E-66 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 PRINTS PR00601 Bacterioferritin signature 128 149 4.2E-66 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 PRINTS PR00601 Bacterioferritin signature 86 106 4.2E-66 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 PRINTS PR00601 Bacterioferritin signature 44 64 4.2E-66 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 PRINTS PR00601 Bacterioferritin signature 107 127 4.2E-66 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 PRINTS PR00601 Bacterioferritin signature 23 43 4.2E-66 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 Pfam PF00210 Ferritin-like domain 8 144 1.5E-37 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 PIRSF PIRSF002560 1 157 3.0E-70 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 8.7E-72 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 SUPERFAMILY SSF47240 1 154 1.28E-52 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 Gene3D G3DSA:1.20.1260.10 1 154 1.6E-62 T 23-04-2016 IPR012347 Ferritin-related RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 PANTHER PTHR30295:SF9 1 154 1.1E-47 T 23-04-2016 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RBRH_RS07880 60748ad40a4f553d567b092d6fd8a9be 159 PANTHER PTHR30295 1 154 1.1E-47 T 23-04-2016 RBRH_RS00495 33e186cdc08732c991b4b0b6ec6ba5a7 256 PANTHER PTHR13696:SF52 2 254 1.8E-82 T 23-04-2016 RBRH_RS00495 33e186cdc08732c991b4b0b6ec6ba5a7 256 Pfam PF13614 AAA domain 3 177 1.2E-63 T 23-04-2016 IPR025669 AAA domain RBRH_RS00495 33e186cdc08732c991b4b0b6ec6ba5a7 256 SUPERFAMILY SSF52540 2 254 1.04E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00495 33e186cdc08732c991b4b0b6ec6ba5a7 256 PANTHER PTHR13696 2 254 1.8E-82 T 23-04-2016 RBRH_RS00495 33e186cdc08732c991b4b0b6ec6ba5a7 256 Gene3D G3DSA:3.40.50.300 3 254 7.2E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 PANTHER PTHR11735 1 346 1.2E-143 T 23-04-2016 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 308 8.5E-112 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 SUPERFAMILY SSF53067 3 121 8.42E-28 T 23-04-2016 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 315 1.7E-130 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 336 61.649 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 Pfam PF00814 Glycoprotease family 24 308 1.3E-96 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 PANTHER PTHR11735:SF6 1 346 1.2E-143 T 23-04-2016 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 Gene3D G3DSA:3.30.420.40 1 159 7.7E-46 T 23-04-2016 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 4.7E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 265 274 4.7E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 4.7E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.7E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 4.7E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 4.7E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RBRH_RS04170 b078825c5ba62c8ad4954913e0c2aa2b 347 SUPERFAMILY SSF53067 101 310 3.56E-43 T 23-04-2016 RBRH_RS10710 562fbf2d0e3cfa2ad90f401b1adabb2a 140 SUPERFAMILY SSF82784 1 139 6.67E-39 T 23-04-2016 IPR003718 OsmC/Ohr family RBRH_RS10710 562fbf2d0e3cfa2ad90f401b1adabb2a 140 Gene3D G3DSA:3.30.300.20 41 138 2.0E-43 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RBRH_RS10710 562fbf2d0e3cfa2ad90f401b1adabb2a 140 Gene3D G3DSA:2.20.25.10 1 36 9.3E-16 T 23-04-2016 RBRH_RS10710 562fbf2d0e3cfa2ad90f401b1adabb2a 140 PANTHER PTHR34352 1 140 7.7E-42 T 23-04-2016 RBRH_RS10710 562fbf2d0e3cfa2ad90f401b1adabb2a 140 Pfam PF02566 OsmC-like protein 36 132 2.4E-16 T 23-04-2016 IPR003718 OsmC/Ohr family RBRH_RS11380 7ee9d7bf60c065acbaf573de4e19ee4a 111 PANTHER PTHR11780:SF12 6 104 2.2E-27 T 23-04-2016 RBRH_RS11380 7ee9d7bf60c065acbaf573de4e19ee4a 111 PANTHER PTHR11780 6 104 2.2E-27 T 23-04-2016 RBRH_RS11380 7ee9d7bf60c065acbaf573de4e19ee4a 111 Gene3D G3DSA:3.40.30.10 5 106 2.8E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11380 7ee9d7bf60c065acbaf573de4e19ee4a 111 SUPERFAMILY SSF52833 5 104 7.94E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11380 7ee9d7bf60c065acbaf573de4e19ee4a 111 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 91 5.8E-6 T 23-04-2016 RBRH_RS03000 b8e69004b64124cf5e090ca42fb4a8a3 328 Gene3D G3DSA:3.90.25.10 171 311 2.0E-33 T 23-04-2016 RBRH_RS03000 b8e69004b64124cf5e090ca42fb4a8a3 328 SUPERFAMILY SSF51735 1 326 1.6E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS03000 b8e69004b64124cf5e090ca42fb4a8a3 328 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 328 57.53 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 RBRH_RS03000 b8e69004b64124cf5e090ca42fb4a8a3 328 Gene3D G3DSA:3.40.50.720 1 170 1.2E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS03000 b8e69004b64124cf5e090ca42fb4a8a3 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 241 3.6E-44 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RBRH_RS03000 b8e69004b64124cf5e090ca42fb4a8a3 328 PANTHER PTHR10366 2 265 1.4E-99 T 23-04-2016 RBRH_RS03000 b8e69004b64124cf5e090ca42fb4a8a3 328 PANTHER PTHR10366 282 327 1.4E-99 T 23-04-2016 RBRH_RS03000 b8e69004b64124cf5e090ca42fb4a8a3 328 PANTHER PTHR10366:SF469 2 265 1.4E-99 T 23-04-2016 RBRH_RS03000 b8e69004b64124cf5e090ca42fb4a8a3 328 PANTHER PTHR10366:SF469 282 327 1.4E-99 T 23-04-2016 RBRH_RS03000 b8e69004b64124cf5e090ca42fb4a8a3 328 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 327 2.2E-135 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 RBRH_RS04785 0d2897a341f84e5366635a56da61d757 133 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 6 110 32.074 T 23-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RBRH_RS04785 0d2897a341f84e5366635a56da61d757 133 PANTHER PTHR21256 6 132 2.9E-59 T 23-04-2016 RBRH_RS04785 0d2897a341f84e5366635a56da61d757 133 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 55 108 5.0E-24 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RBRH_RS04785 0d2897a341f84e5366635a56da61d757 133 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 32 106 3.7E-35 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RBRH_RS04785 0d2897a341f84e5366635a56da61d757 133 SUPERFAMILY SSF141734 6 111 3.14E-47 T 23-04-2016 RBRH_RS00480 4e9fcf0f9970a52906e175edb3d28368 114 Gene3D G3DSA:3.40.50.300 1 109 8.8E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00480 4e9fcf0f9970a52906e175edb3d28368 114 PANTHER PTHR24220:SF358 2 59 6.3E-19 T 23-04-2016 RBRH_RS00480 4e9fcf0f9970a52906e175edb3d28368 114 PANTHER PTHR24220 2 59 6.3E-19 T 23-04-2016 RBRH_RS00480 4e9fcf0f9970a52906e175edb3d28368 114 SUPERFAMILY SSF52540 2 80 7.83E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00480 4e9fcf0f9970a52906e175edb3d28368 114 Pfam PF00005 ABC transporter 17 77 4.9E-12 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS09005 b631a01543a5fdf0a8d0200ea936641e 196 Pfam PF00293 NUDIX domain 50 157 3.4E-17 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RBRH_RS09005 b631a01543a5fdf0a8d0200ea936641e 196 PANTHER PTHR11839 19 180 1.2E-52 T 23-04-2016 RBRH_RS09005 b631a01543a5fdf0a8d0200ea936641e 196 PANTHER PTHR11839:SF9 19 180 1.2E-52 T 23-04-2016 RBRH_RS09005 b631a01543a5fdf0a8d0200ea936641e 196 ProSitePatterns PS00893 Nudix box signature. 84 105 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RBRH_RS09005 b631a01543a5fdf0a8d0200ea936641e 196 Gene3D G3DSA:3.90.79.10 14 182 3.2E-56 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS09005 b631a01543a5fdf0a8d0200ea936641e 196 SUPERFAMILY SSF55811 16 182 8.94E-49 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS04485 75355534dcae518c384abee577218cd9 60 PIRSF PIRSF002211 1 60 6.5E-26 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RBRH_RS04485 75355534dcae518c384abee577218cd9 60 SUPERFAMILY SSF55129 4 58 1.83E-19 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RBRH_RS04485 75355534dcae518c384abee577218cd9 60 Gene3D G3DSA:3.30.1390.20 4 59 3.9E-29 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RBRH_RS04485 75355534dcae518c384abee577218cd9 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 19.978 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RBRH_RS04485 75355534dcae518c384abee577218cd9 60 Pfam PF00327 Ribosomal protein L30p/L7e 7 56 3.3E-17 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RBRH_RS04485 75355534dcae518c384abee577218cd9 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 3.2E-24 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RBRH_RS04485 75355534dcae518c384abee577218cd9 60 PANTHER PTHR15892 4 58 2.5E-23 T 23-04-2016 RBRH_RS04740 141dd47cc72fde59123a95395e8d9eb5 79 PANTHER PTHR12735 26 79 3.1E-18 T 23-04-2016 RBRH_RS04740 141dd47cc72fde59123a95395e8d9eb5 79 PANTHER PTHR12735:SF3 26 79 3.1E-18 T 23-04-2016 RBRH_RS04740 141dd47cc72fde59123a95395e8d9eb5 79 SUPERFAMILY SSF82657 2 78 1.01E-27 T 23-04-2016 IPR002634 BolA protein RBRH_RS04740 141dd47cc72fde59123a95395e8d9eb5 79 Pfam PF01722 BolA-like protein 24 75 7.5E-20 T 23-04-2016 IPR002634 BolA protein RBRH_RS04740 141dd47cc72fde59123a95395e8d9eb5 79 PIRSF PIRSF003113 1 79 4.8E-23 T 23-04-2016 IPR002634 BolA protein RBRH_RS04740 141dd47cc72fde59123a95395e8d9eb5 79 Gene3D G3DSA:3.30.300.90 2 78 4.7E-29 T 23-04-2016 IPR002634 BolA protein RBRH_RS10890 cf712a33f3b907647f7af3c2ecb2cc2e 181 PIRSF PIRSF011484 1 179 1.1E-70 T 23-04-2016 IPR009822 YaeQ RBRH_RS10890 cf712a33f3b907647f7af3c2ecb2cc2e 181 PANTHER PTHR38784:SF1 1 181 2.2E-78 T 23-04-2016 RBRH_RS10890 cf712a33f3b907647f7af3c2ecb2cc2e 181 Gene3D G3DSA:3.10.640.10 1 176 9.0E-81 T 23-04-2016 RBRH_RS10890 cf712a33f3b907647f7af3c2ecb2cc2e 181 PANTHER PTHR38784 1 181 2.2E-78 T 23-04-2016 RBRH_RS10890 cf712a33f3b907647f7af3c2ecb2cc2e 181 SUPERFAMILY SSF52980 4 166 2.12E-72 T 23-04-2016 IPR011335 Restriction endonuclease type II-like RBRH_RS10890 cf712a33f3b907647f7af3c2ecb2cc2e 181 SMART SM01322 1 177 1.7E-115 T 23-04-2016 IPR009822 YaeQ RBRH_RS10890 cf712a33f3b907647f7af3c2ecb2cc2e 181 Pfam PF07152 YaeQ protein 1 167 1.6E-77 T 23-04-2016 IPR009822 YaeQ RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 Gene3D G3DSA:1.10.357.10 61 204 4.2E-22 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 83 202 2.8E-29 T 23-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 SUPERFAMILY SSF48498 83 189 2.23E-15 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 Gene3D G3DSA:1.10.10.60 11 60 2.8E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 PANTHER PTHR30328 1 207 8.9E-32 T 23-04-2016 RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.7E-16 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 PANTHER PTHR30328:SF26 1 207 8.9E-32 T 23-04-2016 RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 SUPERFAMILY SSF46689 2 79 3.08E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.8E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS10135 ac1565b6f01e2e29dac0c0ad8f06e812 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.8E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS05495 b07626b17ddf4bcdc8a35cfa9550b80f 114 Gene3D G3DSA:2.60.40.420 16 112 4.7E-8 T 23-04-2016 IPR008972 Cupredoxin RBRH_RS05495 b07626b17ddf4bcdc8a35cfa9550b80f 114 Pfam PF13473 Cupredoxin-like domain 13 113 3.5E-30 T 23-04-2016 IPR028096 EfeO-type cupredoxin-like domain RBRH_RS05495 b07626b17ddf4bcdc8a35cfa9550b80f 114 SUPERFAMILY SSF49503 15 113 1.14E-14 T 23-04-2016 IPR008972 Cupredoxin RBRH_RS12225 ba2202891cec9e7c3394670e0bb2fce3 151 Gene3D G3DSA:3.30.230.10 4 79 1.7E-17 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS12225 ba2202891cec9e7c3394670e0bb2fce3 151 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 9 68 1.9E-11 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RBRH_RS12225 ba2202891cec9e7c3394670e0bb2fce3 151 SUPERFAMILY SSF54211 6 75 4.05E-14 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS12225 ba2202891cec9e7c3394670e0bb2fce3 151 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 32 46 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 RBRH_RS12225 ba2202891cec9e7c3394670e0bb2fce3 151 Pfam PF00825 Ribonuclease P 6 76 6.4E-16 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RBRH_RS12225 ba2202891cec9e7c3394670e0bb2fce3 151 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 1 62 8.0E-15 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RBRH_RS06895 5358927efe20a48226e82cf9e0f3e69b 342 SUPERFAMILY SSF53098 117 289 1.0E-19 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS06895 5358927efe20a48226e82cf9e0f3e69b 342 PANTHER PTHR35004:SF1 1 340 3.1E-109 T 23-04-2016 RBRH_RS06895 5358927efe20a48226e82cf9e0f3e69b 342 Gene3D G3DSA:3.30.420.10 117 288 2.2E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS06895 5358927efe20a48226e82cf9e0f3e69b 342 Pfam PF13936 Helix-turn-helix domain 11 37 4.1E-7 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain RBRH_RS06895 5358927efe20a48226e82cf9e0f3e69b 342 SUPERFAMILY SSF46689 2 41 1.08E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS06895 5358927efe20a48226e82cf9e0f3e69b 342 Pfam PF00665 Integrase core domain 117 240 1.4E-25 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RBRH_RS06895 5358927efe20a48226e82cf9e0f3e69b 342 PANTHER PTHR35004 1 340 3.1E-109 T 23-04-2016 RBRH_RS06895 5358927efe20a48226e82cf9e0f3e69b 342 Gene3D G3DSA:1.10.10.60 9 39 1.2E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 328 342 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 Pfam PF00437 Type II/IV secretion system protein 137 400 3.1E-84 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 SUPERFAMILY SSF52540 112 493 1.93E-103 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 PANTHER PTHR30258:SF9 23 493 1.2E-219 T 23-04-2016 RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 Gene3D G3DSA:3.30.450.90 104 233 5.6E-53 T 23-04-2016 RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 13 90 3.6E-5 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 SUPERFAMILY SSF160246 23 86 4.45E-8 T 23-04-2016 RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 PANTHER PTHR30258 23 493 1.2E-219 T 23-04-2016 RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 Gene3D G3DSA:3.40.50.300 239 493 4.7E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 SMART SM00382 261 384 5.8E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS00390 09b2b7b922bf416912829e382c215c12 496 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 23 493 2.3E-226 T 23-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 RBRH_RS05400 43c65938e002dd92ed1e94051076641c 256 PANTHER PTHR10672 17 227 1.0E-77 T 23-04-2016 RBRH_RS05400 43c65938e002dd92ed1e94051076641c 256 SMART SM01007 22 202 2.6E-54 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RBRH_RS05400 43c65938e002dd92ed1e94051076641c 256 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 202 4.4E-42 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RBRH_RS05400 43c65938e002dd92ed1e94051076641c 256 SUPERFAMILY SSF53639 15 222 4.71E-59 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RBRH_RS05400 43c65938e002dd92ed1e94051076641c 256 Gene3D G3DSA:3.40.225.10 16 223 5.2E-56 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal RBRH_RS10130 2b960c4d3f519d09bf3ce3df5c474293 425 PANTHER PTHR30158 1 403 1.8E-168 T 23-04-2016 RBRH_RS10130 2b960c4d3f519d09bf3ce3df5c474293 425 Gene3D G3DSA:2.40.50.100 68 100 2.3E-21 T 23-04-2016 RBRH_RS10130 2b960c4d3f519d09bf3ce3df5c474293 425 Gene3D G3DSA:2.40.50.100 175 210 2.3E-21 T 23-04-2016 RBRH_RS10130 2b960c4d3f519d09bf3ce3df5c474293 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 296 2.7E-12 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RBRH_RS10130 2b960c4d3f519d09bf3ce3df5c474293 425 PANTHER PTHR30158:SF3 1 403 1.8E-168 T 23-04-2016 RBRH_RS10130 2b960c4d3f519d09bf3ce3df5c474293 425 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 378 2.6E-83 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RBRH_RS10130 2b960c4d3f519d09bf3ce3df5c474293 425 SUPERFAMILY SSF111369 55 303 1.83E-85 T 23-04-2016 RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 PRINTS PR00315 GTP-binding elongation factor signature 109 120 4.9E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 PRINTS PR00315 GTP-binding elongation factor signature 73 81 4.9E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 PRINTS PR00315 GTP-binding elongation factor signature 93 103 4.9E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 PRINTS PR00315 GTP-binding elongation factor signature 13 26 4.9E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 PRINTS PR00315 GTP-binding elongation factor signature 155 164 4.9E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 PANTHER PTHR23115 13 334 4.2E-57 T 23-04-2016 RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 66 81 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 Pfam PF00009 Elongation factor Tu GTP binding domain 12 223 1.6E-37 T 23-04-2016 RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 SUPERFAMILY SSF52540 12 245 4.57E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 SUPERFAMILY SSF50465 332 434 4.22E-30 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 12 433 2.8E-157 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 Gene3D G3DSA:2.40.30.10 232 325 1.5E-15 T 23-04-2016 RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 SUPERFAMILY SSF50447 232 328 1.94E-16 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 Gene3D G3DSA:3.40.50.300 11 226 4.0E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS02420 e2fcb3fa6198382701d6ba0d384b73da 438 Gene3D G3DSA:2.40.30.10 332 434 1.5E-9 T 23-04-2016 RBRH_RS05655 a2fdd1a2278f9807527da627e7cc75e8 248 SUPERFAMILY SSF53098 64 238 1.24E-30 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS05655 a2fdd1a2278f9807527da627e7cc75e8 248 Pfam PF00665 Integrase core domain 65 186 5.7E-18 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RBRH_RS05655 a2fdd1a2278f9807527da627e7cc75e8 248 Gene3D G3DSA:3.30.420.10 81 222 1.8E-23 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS04770 20b96c06f89a83f540d11d798adcd500 213 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 211 33.434 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RBRH_RS04770 20b96c06f89a83f540d11d798adcd500 213 PANTHER PTHR21235 5 211 6.6E-72 T 23-04-2016 RBRH_RS04770 20b96c06f89a83f540d11d798adcd500 213 Gene3D G3DSA:3.40.50.880 2 211 2.2E-73 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS04770 20b96c06f89a83f540d11d798adcd500 213 Pfam PF00117 Glutamine amidotransferase class-I 7 201 2.7E-12 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RBRH_RS04770 20b96c06f89a83f540d11d798adcd500 213 PIRSF PIRSF000495 3 213 1.1E-64 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RBRH_RS04770 20b96c06f89a83f540d11d798adcd500 213 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 211 2.9E-59 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RBRH_RS04770 20b96c06f89a83f540d11d798adcd500 213 PANTHER PTHR21235:SF1 5 211 6.6E-72 T 23-04-2016 RBRH_RS04770 20b96c06f89a83f540d11d798adcd500 213 SUPERFAMILY SSF52317 5 211 2.45E-48 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS02730 3b708ef446f721bc33599a12ba247488 426 SUPERFAMILY SSF102114 38 422 1.1E-108 T 23-04-2016 RBRH_RS02730 3b708ef446f721bc33599a12ba247488 426 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 46 389 3.8E-109 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- RBRH_RS02730 3b708ef446f721bc33599a12ba247488 426 SMART SM00729 45 265 1.2E-48 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS02730 3b708ef446f721bc33599a12ba247488 426 Gene3D G3DSA:3.80.30.20 46 281 6.0E-30 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RBRH_RS02730 3b708ef446f721bc33599a12ba247488 426 Pfam PF04055 Radical SAM superfamily 50 215 4.2E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS02730 3b708ef446f721bc33599a12ba247488 426 PANTHER PTHR13932 44 425 4.7E-170 T 23-04-2016 RBRH_RS02730 3b708ef446f721bc33599a12ba247488 426 PANTHER PTHR13932:SF7 44 425 4.7E-170 T 23-04-2016 RBRH_RS02730 3b708ef446f721bc33599a12ba247488 426 Pfam PF06969 HemN C-terminal domain 352 411 2.0E-9 T 23-04-2016 IPR010723 HemN, C-terminal RBRH_RS04960 9d23812fce531a1abea6e2792722a477 200 PANTHER PTHR30108 3 194 9.5E-77 T 23-04-2016 RBRH_RS04960 9d23812fce531a1abea6e2792722a477 200 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 11 192 4.6E-71 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RBRH_RS04960 9d23812fce531a1abea6e2792722a477 200 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 10 194 36.508 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RBRH_RS04960 9d23812fce531a1abea6e2792722a477 200 Gene3D G3DSA:3.40.50.1950 10 194 1.2E-75 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RBRH_RS04960 9d23812fce531a1abea6e2792722a477 200 PANTHER PTHR30108:SF2 3 194 9.5E-77 T 23-04-2016 RBRH_RS04960 9d23812fce531a1abea6e2792722a477 200 Pfam PF02441 Flavoprotein 11 135 1.7E-25 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RBRH_RS04960 9d23812fce531a1abea6e2792722a477 200 SUPERFAMILY SSF52507 10 194 5.49E-61 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RBRH_RS11985 ca650ce8534478375ef9ba38b30cd394 262 PANTHER PTHR22748 1 258 1.7E-93 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RBRH_RS11985 ca650ce8534478375ef9ba38b30cd394 262 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 251 4.4E-70 T 23-04-2016 RBRH_RS11985 ca650ce8534478375ef9ba38b30cd394 262 SUPERFAMILY SSF56219 2 254 2.62E-72 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RBRH_RS11985 ca650ce8534478375ef9ba38b30cd394 262 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 246 1.5E-23 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RBRH_RS11985 ca650ce8534478375ef9ba38b30cd394 262 Gene3D G3DSA:3.60.10.10 1 254 1.1E-91 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RBRH_RS11985 ca650ce8534478375ef9ba38b30cd394 262 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 253 6.6E-75 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RBRH_RS11985 ca650ce8534478375ef9ba38b30cd394 262 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RBRH_RS07235 06cbcf26ddef007bb89f76488bd620bf 523 PANTHER PTHR33693:SF3 164 476 2.0E-89 T 23-04-2016 RBRH_RS07235 06cbcf26ddef007bb89f76488bd620bf 523 SUPERFAMILY SSF52141 311 479 1.18E-47 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS07235 06cbcf26ddef007bb89f76488bd620bf 523 SMART SM00986 328 483 2.7E-30 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS07235 06cbcf26ddef007bb89f76488bd620bf 523 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 10 262 3.5E-55 T 23-04-2016 IPR023875 DNA metabolism protein, putative RBRH_RS07235 06cbcf26ddef007bb89f76488bd620bf 523 PANTHER PTHR33693 164 476 2.0E-89 T 23-04-2016 RBRH_RS07235 06cbcf26ddef007bb89f76488bd620bf 523 SMART SM00987 328 483 2.7E-30 T 23-04-2016 RBRH_RS07235 06cbcf26ddef007bb89f76488bd620bf 523 Pfam PF03167 Uracil DNA glycosylase superfamily 328 469 2.1E-35 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS07235 06cbcf26ddef007bb89f76488bd620bf 523 Gene3D G3DSA:3.40.470.10 310 486 3.1E-57 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS07235 06cbcf26ddef007bb89f76488bd620bf 523 Pfam PF13566 Domain of unknown function (DUF4130 100 262 1.9E-37 T 23-04-2016 IPR025404 Domain of unknown function DUF4130 RBRH_RS07235 06cbcf26ddef007bb89f76488bd620bf 523 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 265 482 4.3E-73 T 23-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 SUPERFAMILY SSF51735 5 258 1.54E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 Gene3D G3DSA:3.40.50.720 5 258 1.3E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 3.5E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 3.5E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.5E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PANTHER PTHR24322 14 138 8.7E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PANTHER PTHR24322 166 198 8.7E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.5E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.5E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.5E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 2.5E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.5E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.5E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS05250 dde2aa9b31def7a2e34f67f6167bc8a2 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 257 1.3E-57 T 23-04-2016 RBRH_RS08500 b09f78afcc2d4cff4268f49271a98ad0 244 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 35 239 3.3E-36 T 23-04-2016 IPR004302 Chitin-binding protein, N-terminal RBRH_RS08500 b09f78afcc2d4cff4268f49271a98ad0 244 SUPERFAMILY SSF81296 35 241 3.22E-44 T 23-04-2016 IPR014756 Immunoglobulin E-set RBRH_RS08500 b09f78afcc2d4cff4268f49271a98ad0 244 PANTHER PTHR34823 7 241 2.1E-92 T 23-04-2016 RBRH_RS08500 b09f78afcc2d4cff4268f49271a98ad0 244 Gene3D G3DSA:2.70.50.50 35 241 4.5E-48 T 23-04-2016 RBRH_RS08500 b09f78afcc2d4cff4268f49271a98ad0 244 PANTHER PTHR34823:SF2 7 241 2.1E-92 T 23-04-2016 RBRH_RS05550 f63310e5d0279874c978c6a6e54954f3 357 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 13 58 2.7E-6 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RBRH_RS05550 f63310e5d0279874c978c6a6e54954f3 357 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 166 347 8.8E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS05550 f63310e5d0279874c978c6a6e54954f3 357 PANTHER PTHR30325 9 352 1.6E-145 T 23-04-2016 RBRH_RS05550 f63310e5d0279874c978c6a6e54954f3 357 Gene3D G3DSA:1.10.3720.10 139 344 3.4E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS05550 f63310e5d0279874c978c6a6e54954f3 357 SUPERFAMILY SSF161098 143 330 7.06E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS01995 ab81aaed826d458f870addd152234f05 212 PANTHER PTHR30309:SF0 1 200 2.2E-68 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RBRH_RS01995 ab81aaed826d458f870addd152234f05 212 SMART SM01207 8 189 7.9E-82 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RBRH_RS01995 ab81aaed826d458f870addd152234f05 212 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 197 2.3E-56 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RBRH_RS01995 ab81aaed826d458f870addd152234f05 212 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 188 1.1E-49 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RBRH_RS01995 ab81aaed826d458f870addd152234f05 212 PANTHER PTHR30309 1 200 2.2E-68 T 23-04-2016 RBRH_RS01995 ab81aaed826d458f870addd152234f05 212 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 197 20.259 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RBRH_RS10805 0ea6101a3c69a87918654fa54e7ad42c 200 SUPERFAMILY SSF48498 77 188 6.23E-20 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RBRH_RS10805 0ea6101a3c69a87918654fa54e7ad42c 200 SUPERFAMILY SSF46689 2 69 2.41E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS10805 0ea6101a3c69a87918654fa54e7ad42c 200 PANTHER PTHR30328:SF19 4 167 3.7E-25 T 23-04-2016 RBRH_RS10805 0ea6101a3c69a87918654fa54e7ad42c 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 7.4E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS10805 0ea6101a3c69a87918654fa54e7ad42c 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.5E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS10805 0ea6101a3c69a87918654fa54e7ad42c 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.5E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RBRH_RS10805 0ea6101a3c69a87918654fa54e7ad42c 200 Gene3D G3DSA:1.10.10.60 4 57 3.3E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS10805 0ea6101a3c69a87918654fa54e7ad42c 200 Gene3D G3DSA:1.10.357.10 58 192 1.0E-53 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RBRH_RS10805 0ea6101a3c69a87918654fa54e7ad42c 200 PANTHER PTHR30328 4 167 3.7E-25 T 23-04-2016 RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.0E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.0E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.0E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 SUPERFAMILY SSF51735 4 243 2.55E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PANTHER PTHR24322 9 139 1.9E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PANTHER PTHR24322 156 186 1.9E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 Gene3D G3DSA:3.40.50.720 4 242 1.4E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 7.2E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.2E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.2E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.2E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.2E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 241 4.1E-35 T 23-04-2016 RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PANTHER PTHR24322:SF211 9 139 1.9E-34 T 23-04-2016 RBRH_RS00220 55a97113f74740f499ed14c8a5f4631b 259 PANTHER PTHR24322:SF211 156 186 1.9E-34 T 23-04-2016 RBRH_RS02175 f235a9a92c03e120ccdec30f772ff976 458 Pfam PF13742 OB-fold nucleic acid binding domain 19 110 4.7E-28 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 RBRH_RS02175 f235a9a92c03e120ccdec30f772ff976 458 PANTHER PTHR30008 10 458 4.6E-148 T 23-04-2016 RBRH_RS02175 f235a9a92c03e120ccdec30f772ff976 458 Pfam PF02601 Exonuclease VII, large subunit 134 444 1.2E-95 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RBRH_RS02175 f235a9a92c03e120ccdec30f772ff976 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 20 445 9.9E-137 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RBRH_RS02175 f235a9a92c03e120ccdec30f772ff976 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 15 448 27.443 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RBRH_RS02175 f235a9a92c03e120ccdec30f772ff976 458 PANTHER PTHR30008:SF0 10 458 4.6E-148 T 23-04-2016 RBRH_RS08325 7633b53421322edb51af1611a0862f1d 266 SUPERFAMILY SSF46785 12 83 2.02E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS08325 7633b53421322edb51af1611a0862f1d 266 PANTHER PTHR30136:SF7 11 264 1.9E-59 T 23-04-2016 RBRH_RS08325 7633b53421322edb51af1611a0862f1d 266 PANTHER PTHR30136 11 264 1.9E-59 T 23-04-2016 RBRH_RS08325 7633b53421322edb51af1611a0862f1d 266 Pfam PF01614 Bacterial transcriptional regulator 130 250 2.3E-31 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal RBRH_RS08325 7633b53421322edb51af1611a0862f1d 266 Gene3D G3DSA:1.10.10.10 11 81 5.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS08325 7633b53421322edb51af1611a0862f1d 266 Gene3D G3DSA:3.30.450.40 82 259 3.2E-49 T 23-04-2016 IPR029016 GAF domain-like RBRH_RS08325 7633b53421322edb51af1611a0862f1d 266 SMART SM00346 12 101 2.1E-21 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RBRH_RS08325 7633b53421322edb51af1611a0862f1d 266 Pfam PF09339 IclR helix-turn-helix domain 15 64 8.4E-14 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RBRH_RS08325 7633b53421322edb51af1611a0862f1d 266 SUPERFAMILY SSF55781 69 255 5.62E-44 T 23-04-2016 IPR029016 GAF domain-like RBRH_RS09225 76516d91581c7f03c8b731f84795764d 216 PANTHER PTHR10285 11 204 6.2E-80 T 23-04-2016 RBRH_RS09225 76516d91581c7f03c8b731f84795764d 216 SUPERFAMILY SSF53271 10 213 3.04E-60 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS09225 76516d91581c7f03c8b731f84795764d 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 9 215 42.289 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RBRH_RS09225 76516d91581c7f03c8b731f84795764d 216 Gene3D G3DSA:3.40.50.2020 9 215 4.7E-73 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS09225 76516d91581c7f03c8b731f84795764d 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 13 215 2.7E-74 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RBRH_RS09225 76516d91581c7f03c8b731f84795764d 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 214 1.2E-68 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS09250 d94bca1f8bd1644da453aaa09361f7e2 131 Gene3D G3DSA:3.30.460.10 3 107 3.4E-37 T 23-04-2016 RBRH_RS09250 d94bca1f8bd1644da453aaa09361f7e2 131 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.1E-25 T 23-04-2016 RBRH_RS09250 d94bca1f8bd1644da453aaa09361f7e2 131 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.1E-33 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RBRH_RS09250 d94bca1f8bd1644da453aaa09361f7e2 131 PANTHER PTHR21043 1 106 8.7E-34 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RBRH_RS09250 d94bca1f8bd1644da453aaa09361f7e2 131 SUPERFAMILY SSF81301 1 109 1.06E-35 T 23-04-2016 RBRH_RS09250 d94bca1f8bd1644da453aaa09361f7e2 131 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 22.922 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RBRH_RS03685 f29d6022d174e71e9f735e7a99dc488a 181 PANTHER PTHR10173:SF34 3 157 6.1E-78 T 23-04-2016 RBRH_RS03685 f29d6022d174e71e9f735e7a99dc488a 181 SUPERFAMILY SSF55068 3 169 4.58E-70 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RBRH_RS03685 f29d6022d174e71e9f735e7a99dc488a 181 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 157 5.8E-56 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RBRH_RS03685 f29d6022d174e71e9f735e7a99dc488a 181 Pfam PF01625 Peptide methionine sulfoxide reductase 5 157 4.3E-62 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RBRH_RS03685 f29d6022d174e71e9f735e7a99dc488a 181 PANTHER PTHR10173 3 157 6.1E-78 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RBRH_RS03685 f29d6022d174e71e9f735e7a99dc488a 181 Gene3D G3DSA:3.30.1060.10 3 157 6.0E-70 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RBRH_RS03685 f29d6022d174e71e9f735e7a99dc488a 181 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 2 162 35.851 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RBRH_RS06875 86d419dc430308773486e5436f54c741 134 Pfam PF01850 PIN domain 3 125 1.1E-14 T 23-04-2016 IPR002716 PIN domain RBRH_RS06875 86d419dc430308773486e5436f54c741 134 Gene3D G3DSA:3.40.50.1010 2 125 6.7E-19 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS06875 86d419dc430308773486e5436f54c741 134 PANTHER PTHR33653 1 132 2.5E-26 T 23-04-2016 RBRH_RS06875 86d419dc430308773486e5436f54c741 134 SUPERFAMILY SSF88723 2 132 3.92E-25 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS06875 86d419dc430308773486e5436f54c741 134 PANTHER PTHR33653:SF1 1 132 2.5E-26 T 23-04-2016 RBRH_RS04615 b1466b8f2d57de1e6ebe584c271a933f 365 Pfam PF01761 3-dehydroquinate synthase 74 331 1.4E-107 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RBRH_RS04615 b1466b8f2d57de1e6ebe584c271a933f 365 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 9 364 42.3 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RBRH_RS04615 b1466b8f2d57de1e6ebe584c271a933f 365 SUPERFAMILY SSF56796 12 358 4.45E-117 T 23-04-2016 RBRH_RS04615 b1466b8f2d57de1e6ebe584c271a933f 365 Gene3D G3DSA:1.20.1090.10 180 361 4.4E-66 T 23-04-2016 RBRH_RS04615 b1466b8f2d57de1e6ebe584c271a933f 365 PANTHER PTHR21090 5 363 4.6E-189 T 23-04-2016 RBRH_RS04615 b1466b8f2d57de1e6ebe584c271a933f 365 Gene3D G3DSA:3.40.50.1970 10 179 1.1E-70 T 23-04-2016 RBRH_RS04615 b1466b8f2d57de1e6ebe584c271a933f 365 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 20 350 1.4E-119 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RBRH_RS04615 b1466b8f2d57de1e6ebe584c271a933f 365 PIRSF PIRSF001455 11 365 2.5E-108 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RBRH_RS08160 2a9ff98ed546a3e2e2678f0f2d9fe537 276 SUPERFAMILY SSF89550 1 86 3.14E-47 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RBRH_RS08160 2a9ff98ed546a3e2e2678f0f2d9fe537 276 SUPERFAMILY SSF89550 156 260 3.14E-47 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RBRH_RS08160 2a9ff98ed546a3e2e2678f0f2d9fe537 276 PANTHER PTHR30007:SF4 1 276 5.2E-67 T 23-04-2016 RBRH_RS08160 2a9ff98ed546a3e2e2678f0f2d9fe537 276 Gene3D G3DSA:3.20.20.140 156 253 1.4E-39 T 23-04-2016 RBRH_RS08160 2a9ff98ed546a3e2e2678f0f2d9fe537 276 Gene3D G3DSA:3.20.20.140 1 86 1.4E-39 T 23-04-2016 RBRH_RS08160 2a9ff98ed546a3e2e2678f0f2d9fe537 276 PANTHER PTHR30007 1 276 5.2E-67 T 23-04-2016 RBRH_RS08160 2a9ff98ed546a3e2e2678f0f2d9fe537 276 Pfam PF02811 PHP domain 4 183 1.5E-7 T 23-04-2016 IPR004013 PHP domain GO:0003824 RBRH_RS08160 2a9ff98ed546a3e2e2678f0f2d9fe537 276 SMART SM00481 3 68 6.4E-14 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 Gene3D G3DSA:3.40.630.20 2 211 1.9E-66 T 23-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 PANTHER PTHR23402:SF1 1 218 6.3E-63 T 23-04-2016 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 219 9.2E-80 T 23-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 SUPERFAMILY SSF53182 1 218 1.83E-69 T 23-04-2016 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 PANTHER PTHR23402 1 218 6.3E-63 T 23-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 73 89 - T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 205 39.494 T 23-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 Pfam PF01470 Pyroglutamyl peptidase 3 206 5.2E-75 T 23-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 PIRSF PIRSF015592 1 217 3.7E-79 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 166 178 1.0E-45 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 1.0E-45 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 136 152 1.0E-45 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 84 104 1.0E-45 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RBRH_RS11785 07e3568f2810770f0076cecbebb7e3ed 219 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 66 78 1.0E-45 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RBRH_RS05820 e5b480627902955eba8814c8bbe8cf83 78 Gene3D G3DSA:2.30.30.100 2 71 3.5E-37 T 23-04-2016 RBRH_RS05820 e5b480627902955eba8814c8bbe8cf83 78 PANTHER PTHR34772:SF1 2 77 1.7E-36 T 23-04-2016 RBRH_RS05820 e5b480627902955eba8814c8bbe8cf83 78 SUPERFAMILY SSF50182 8 71 1.47E-23 T 23-04-2016 IPR010920 LSM domain RBRH_RS05820 e5b480627902955eba8814c8bbe8cf83 78 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 1.1E-28 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RBRH_RS05820 e5b480627902955eba8814c8bbe8cf83 78 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.79 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RBRH_RS05820 e5b480627902955eba8814c8bbe8cf83 78 PANTHER PTHR34772 2 77 1.7E-36 T 23-04-2016 RBRH_RS06855 54c1533125d9d1821e8f21696f57c62f 92 PANTHER PTHR40266 1 92 2.6E-18 T 23-04-2016 RBRH_RS06855 54c1533125d9d1821e8f21696f57c62f 92 PANTHER PTHR40266:SF2 1 92 2.6E-18 T 23-04-2016 RBRH_RS06855 54c1533125d9d1821e8f21696f57c62f 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 92 1.2E-27 T 23-04-2016 IPR007711 Toxin HigB-1 RBRH_RS06855 54c1533125d9d1821e8f21696f57c62f 92 SUPERFAMILY SSF143011 1 92 3.92E-15 T 23-04-2016 RBRH_RS08225 d84624b40e746380284f0072bf91a487 260 PANTHER PTHR10060 1 258 1.6E-60 T 23-04-2016 IPR001130 TatD family GO:0016788 RBRH_RS08225 d84624b40e746380284f0072bf91a487 260 PANTHER PTHR10060:SF20 1 258 1.6E-60 T 23-04-2016 RBRH_RS08225 d84624b40e746380284f0072bf91a487 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RBRH_RS08225 d84624b40e746380284f0072bf91a487 260 Pfam PF01026 TatD related DNase 3 253 4.9E-57 T 23-04-2016 IPR001130 TatD family GO:0016788 RBRH_RS08225 d84624b40e746380284f0072bf91a487 260 SUPERFAMILY SSF51556 2 252 4.77E-69 T 23-04-2016 IPR032466 Metal-dependent hydrolase RBRH_RS08225 d84624b40e746380284f0072bf91a487 260 PIRSF PIRSF005902 1 256 3.9E-56 T 23-04-2016 IPR001130 TatD family GO:0016788 RBRH_RS08225 d84624b40e746380284f0072bf91a487 260 Gene3D G3DSA:3.20.20.140 1 252 1.1E-66 T 23-04-2016 RBRH_RS07200 4d6cf831e2ef47df57e4d13d3a2d6d54 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4 157 3.1E-65 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS07200 4d6cf831e2ef47df57e4d13d3a2d6d54 159 SUPERFAMILY SSF69765 1 157 3.92E-64 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS07200 4d6cf831e2ef47df57e4d13d3a2d6d54 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS07200 4d6cf831e2ef47df57e4d13d3a2d6d54 159 PANTHER PTHR32125 4 157 6.8E-54 T 23-04-2016 RBRH_RS07200 4d6cf831e2ef47df57e4d13d3a2d6d54 159 Pfam PF02542 YgbB family 4 156 3.4E-64 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS07200 4d6cf831e2ef47df57e4d13d3a2d6d54 159 Gene3D G3DSA:3.30.1330.50 1 157 8.3E-70 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS07200 4d6cf831e2ef47df57e4d13d3a2d6d54 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 158 36.098 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RBRH_RS03030 eaa749c65ae5f4e5bb4edc2f42ef1ac8 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 215 2.2E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS03030 eaa749c65ae5f4e5bb4edc2f42ef1ac8 217 SUPERFAMILY SSF161098 8 201 3.53E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS03030 eaa749c65ae5f4e5bb4edc2f42ef1ac8 217 PANTHER PTHR30450:SF1 1 217 2.0E-115 T 23-04-2016 RBRH_RS03030 eaa749c65ae5f4e5bb4edc2f42ef1ac8 217 PANTHER PTHR30450 1 217 2.0E-115 T 23-04-2016 RBRH_RS03030 eaa749c65ae5f4e5bb4edc2f42ef1ac8 217 Gene3D G3DSA:1.10.3720.10 6 215 5.0E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 Gene3D G3DSA:1.10.150.20 187 257 1.0E-22 T 23-04-2016 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 PANTHER PTHR11076 3 41 7.2E-102 T 23-04-2016 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 PANTHER PTHR11076 62 366 7.2E-102 T 23-04-2016 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 Gene3D G3DSA:3.30.1490.100 262 369 1.5E-31 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 Gene3D G3DSA:3.30.70.270 90 183 6.3E-25 T 23-04-2016 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 Pfam PF11798 IMS family HHH motif 187 217 2.8E-7 T 23-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 Pfam PF00817 impB/mucB/samB family 10 173 4.1E-41 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 SUPERFAMILY SSF100879 262 369 4.08E-27 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 Pfam PF11799 impB/mucB/samB family C-terminal domain 258 368 4.4E-19 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 Hamap MF_01113 DNA polymerase IV [dinB]. 4 373 32.148 T 23-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS06745 43e748a25cea4a05f91c083c1d0b9a49 388 SUPERFAMILY SSF56672 4 255 3.02E-74 T 23-04-2016 RBRH_RS06395 8ab5cd70a85819a202169585f2f41265 492 Gene3D G3DSA:3.40.640.10 132 355 2.3E-56 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS06395 8ab5cd70a85819a202169585f2f41265 492 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 89 489 8.1E-183 T 23-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 RBRH_RS06395 8ab5cd70a85819a202169585f2f41265 492 SUPERFAMILY SSF53383 88 489 1.27E-85 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS06395 8ab5cd70a85819a202169585f2f41265 492 PANTHER PTHR11751:SF354 100 488 2.1E-110 T 23-04-2016 RBRH_RS06395 8ab5cd70a85819a202169585f2f41265 492 Gene3D G3DSA:3.90.1150.10 356 490 1.0E-26 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS06395 8ab5cd70a85819a202169585f2f41265 492 PANTHER PTHR11751 100 488 2.1E-110 T 23-04-2016 RBRH_RS06395 8ab5cd70a85819a202169585f2f41265 492 Pfam PF00155 Aminotransferase class I and II 120 483 6.9E-37 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RBRH_RS06475 c5cac541e3684d057da42cea34f8016f 454 PANTHER PTHR22939:SF78 210 453 8.9E-70 T 23-04-2016 RBRH_RS06475 c5cac541e3684d057da42cea34f8016f 454 Gene3D G3DSA:2.30.42.10 211 295 3.1E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS06475 c5cac541e3684d057da42cea34f8016f 454 SMART SM00228 217 283 4.8E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS06475 c5cac541e3684d057da42cea34f8016f 454 SUPERFAMILY SSF50156 226 311 5.39E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS06475 c5cac541e3684d057da42cea34f8016f 454 Pfam PF13180 PDZ domain 224 290 1.4E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS06475 c5cac541e3684d057da42cea34f8016f 454 Pfam PF02163 Peptidase family M50 10 439 6.9E-72 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 RBRH_RS06475 c5cac541e3684d057da42cea34f8016f 454 Gene3D G3DSA:2.30.42.10 99 202 1.7E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 RBRH_RS06475 c5cac541e3684d057da42cea34f8016f 454 PANTHER PTHR22939 210 453 8.9E-70 T 23-04-2016 RBRH_RS06475 c5cac541e3684d057da42cea34f8016f 454 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 452 7.2E-102 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 RBRH_RS11440 e2d20df1b0e7315f0408d0a1cc032877 329 SUPERFAMILY SSF56529 77 325 6.67E-60 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS11440 e2d20df1b0e7315f0408d0a1cc032877 329 PANTHER PTHR11820:SF85 8 323 9.7E-126 T 23-04-2016 RBRH_RS11440 e2d20df1b0e7315f0408d0a1cc032877 329 Gene3D G3DSA:3.90.850.10 67 307 2.0E-39 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS11440 e2d20df1b0e7315f0408d0a1cc032877 329 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 3.4E-37 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS11440 e2d20df1b0e7315f0408d0a1cc032877 329 PANTHER PTHR11820 8 323 9.7E-126 T 23-04-2016 RBRH_RS12160 cfe02afd1b560dcf1269a4306a33e65c 227 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 17 220 2.0E-88 T 23-04-2016 IPR008517 Protein of unknown function DUF799 RBRH_RS02165 6a857638235d64792bac06bdab0c8152 64 Pfam PF03966 Trm112p-like protein 2 41 5.0E-13 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RBRH_RS02165 6a857638235d64792bac06bdab0c8152 64 Gene3D G3DSA:2.20.25.10 8 54 2.9E-26 T 23-04-2016 RBRH_RS02165 6a857638235d64792bac06bdab0c8152 64 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.516 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RBRH_RS02165 6a857638235d64792bac06bdab0c8152 64 PANTHER PTHR33505 2 53 3.5E-24 T 23-04-2016 RBRH_RS02165 6a857638235d64792bac06bdab0c8152 64 SUPERFAMILY SSF158997 2 52 2.62E-21 T 23-04-2016 RBRH_RS04455 3a6b5100a9f3d37cb7434a1136e60a55 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04455 3a6b5100a9f3d37cb7434a1136e60a55 179 SUPERFAMILY SSF55282 3 179 1.62E-76 T 23-04-2016 IPR022803 Ribosomal protein L5 domain RBRH_RS04455 3a6b5100a9f3d37cb7434a1136e60a55 179 PANTHER PTHR11994 1 178 1.9E-89 T 23-04-2016 RBRH_RS04455 3a6b5100a9f3d37cb7434a1136e60a55 179 Pfam PF00281 Ribosomal protein L5 24 80 1.3E-27 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal RBRH_RS04455 3a6b5100a9f3d37cb7434a1136e60a55 179 PIRSF PIRSF002161 1 179 3.2E-63 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04455 3a6b5100a9f3d37cb7434a1136e60a55 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.174 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04455 3a6b5100a9f3d37cb7434a1136e60a55 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.3E-38 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal RBRH_RS04455 3a6b5100a9f3d37cb7434a1136e60a55 179 Gene3D G3DSA:3.30.1440.10 1 179 3.8E-76 T 23-04-2016 IPR022803 Ribosomal protein L5 domain RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 Gene3D G3DSA:3.10.150.10 5 121 3.2E-23 T 23-04-2016 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 6 119 1.3E-27 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 SUPERFAMILY SSF55979 6 117 2.58E-19 T 23-04-2016 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 SUPERFAMILY SSF55979 128 245 5.23E-28 T 23-04-2016 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 SMART SM00480 18 364 1.8E-107 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 6 367 7.0E-93 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 244 2.8E-33 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 Gene3D G3DSA:3.10.150.10 128 249 1.7E-36 T 23-04-2016 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 PIRSF PIRSF000804 1 368 1.7E-107 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 Gene3D G3DSA:3.10.150.10 250 368 6.8E-35 T 23-04-2016 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 367 2.3E-31 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 PANTHER PTHR30478 4 368 1.8E-107 T 23-04-2016 RBRH_RS00010 c9a6cfb448f9c9d8c4ee36e118f9af32 368 SUPERFAMILY SSF55979 246 368 4.08E-33 T 23-04-2016 RBRH_RS10695 9e7dfb7db83a90d502f96062367402f6 121 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 121 1.0E-39 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RBRH_RS10695 9e7dfb7db83a90d502f96062367402f6 121 PANTHER PTHR10072 16 121 2.4E-51 T 23-04-2016 RBRH_RS10695 9e7dfb7db83a90d502f96062367402f6 121 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 121 37.193 T 23-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 RBRH_RS10695 9e7dfb7db83a90d502f96062367402f6 121 SUPERFAMILY SSF89360 16 110 6.15E-33 T 23-04-2016 IPR000361 FeS cluster biogenesis RBRH_RS10695 9e7dfb7db83a90d502f96062367402f6 121 Pfam PF01521 Iron-sulphur cluster biosynthesis 16 116 3.0E-22 T 23-04-2016 IPR000361 FeS cluster biogenesis RBRH_RS10695 9e7dfb7db83a90d502f96062367402f6 121 Gene3D G3DSA:2.60.300.12 11 107 4.3E-35 T 23-04-2016 IPR000361 FeS cluster biogenesis RBRH_RS10695 9e7dfb7db83a90d502f96062367402f6 121 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 102 119 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RBRH_RS01075 9ad46576f900c16f29033a0e04925b2c 315 PANTHER PTHR10366 8 314 2.3E-155 T 23-04-2016 RBRH_RS01075 9ad46576f900c16f29033a0e04925b2c 315 Gene3D G3DSA:3.40.50.720 3 174 3.6E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01075 9ad46576f900c16f29033a0e04925b2c 315 PANTHER PTHR10366:SF399 8 314 2.3E-155 T 23-04-2016 RBRH_RS01075 9ad46576f900c16f29033a0e04925b2c 315 SUPERFAMILY SSF51735 4 313 2.72E-89 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01075 9ad46576f900c16f29033a0e04925b2c 315 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 306 7.8E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01075 9ad46576f900c16f29033a0e04925b2c 315 Gene3D G3DSA:3.90.25.10 175 314 3.3E-53 T 23-04-2016 RBRH_RS16335 7a88359fc19eecebdc22012feae615c2 417 Pfam PF01551 Peptidase family M23 281 377 3.7E-34 T 23-04-2016 IPR016047 Peptidase M23 RBRH_RS16335 7a88359fc19eecebdc22012feae615c2 417 SUPERFAMILY SSF51261 205 378 7.32E-56 T 23-04-2016 IPR011055 Duplicated hybrid motif RBRH_RS16335 7a88359fc19eecebdc22012feae615c2 417 PANTHER PTHR21666 225 379 9.1E-44 T 23-04-2016 RBRH_RS16335 7a88359fc19eecebdc22012feae615c2 417 Gene3D G3DSA:2.70.70.10 243 379 7.6E-47 T 23-04-2016 RBRH_RS11790 7ce6e76baf7e97f216a0813e0f6c3e6e 382 Pfam PF01963 TraB family 115 380 4.2E-48 T 23-04-2016 IPR002816 Pheromone shutdown, TraB RBRH_RS11790 7ce6e76baf7e97f216a0813e0f6c3e6e 382 PANTHER PTHR40590 87 379 5.3E-16 T 23-04-2016 RBRH_RS09390 308c55487ad4130e2ec5f09a76dc0348 117 PANTHER PTHR33751 28 112 1.9E-17 T 23-04-2016 RBRH_RS09390 308c55487ad4130e2ec5f09a76dc0348 117 Gene3D G3DSA:1.10.760.10 17 107 2.4E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS09390 308c55487ad4130e2ec5f09a76dc0348 117 SUPERFAMILY SSF46626 4 107 2.44E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS09390 308c55487ad4130e2ec5f09a76dc0348 117 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 35 103 3.3E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS09390 308c55487ad4130e2ec5f09a76dc0348 117 PANTHER PTHR33751:SF3 28 112 1.9E-17 T 23-04-2016 RBRH_RS05190 46ec570275527600666bc59f106e6db2 295 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 229 3.2E-34 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RBRH_RS05190 46ec570275527600666bc59f106e6db2 295 PANTHER PTHR30367:SF5 9 288 2.4E-133 T 23-04-2016 RBRH_RS05190 46ec570275527600666bc59f106e6db2 295 PANTHER PTHR30367 9 288 2.4E-133 T 23-04-2016 RBRH_RS05190 46ec570275527600666bc59f106e6db2 295 Pfam PF13533 Biotin-lipoyl like 46 92 1.3E-15 T 23-04-2016 RBRH_RS05190 46ec570275527600666bc59f106e6db2 295 Gene3D G3DSA:2.40.50.100 45 78 1.0E-17 T 23-04-2016 RBRH_RS05190 46ec570275527600666bc59f106e6db2 295 Gene3D G3DSA:2.40.50.100 152 185 1.0E-17 T 23-04-2016 RBRH_RS05190 46ec570275527600666bc59f106e6db2 295 SUPERFAMILY SSF111369 41 187 1.7E-21 T 23-04-2016 RBRH_RS05190 46ec570275527600666bc59f106e6db2 295 Pfam PF13437 HlyD family secretion protein 154 236 3.5E-8 T 23-04-2016 RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 Gene3D G3DSA:3.40.50.300 310 525 8.0E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 Gene3D G3DSA:3.40.50.300 1 266 3.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 Pfam PF12848 ABC transporter 217 295 7.0E-29 T 23-04-2016 IPR032781 ABC-transporter extension domain RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 PANTHER PTHR19211:SF49 2 563 0.0 T 23-04-2016 RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 PANTHER PTHR19211 2 563 0.0 T 23-04-2016 RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 Pfam PF00005 ABC transporter 335 465 1.0E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 Pfam PF00005 ABC transporter 19 178 9.3E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 SUPERFAMILY SSF52540 296 521 1.47E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 SUPERFAMILY SSF52540 119 255 7.41E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 SUPERFAMILY SSF52540 2 92 7.41E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 Pfam PF16326 ABC transporter C-terminal domain 591 656 8.8E-8 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 SMART SM00382 26 225 1.2E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS06355 fc81917369d029fe7918e3eb53e54609 662 SMART SM00382 343 509 2.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS11345 42313d22528e6631415dd91d243f0ebc 338 Pfam PF04055 Radical SAM superfamily 106 266 4.1E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RBRH_RS11345 42313d22528e6631415dd91d243f0ebc 338 PANTHER PTHR10949 48 327 8.0E-165 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RBRH_RS11345 42313d22528e6631415dd91d243f0ebc 338 PIRSF PIRSF005963 7 335 2.8E-129 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RBRH_RS11345 42313d22528e6631415dd91d243f0ebc 338 Hamap MF_00206 Lipoyl synthase [lipA]. 51 338 154.58 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RBRH_RS11345 42313d22528e6631415dd91d243f0ebc 338 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 46 88 1.3E-8 T 23-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RBRH_RS11345 42313d22528e6631415dd91d243f0ebc 338 SMART SM00729 99 308 1.9E-18 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RBRH_RS11345 42313d22528e6631415dd91d243f0ebc 338 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 332 1.3E-130 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RBRH_RS11345 42313d22528e6631415dd91d243f0ebc 338 SUPERFAMILY SSF102114 67 329 3.14E-68 T 23-04-2016 RBRH_RS11345 42313d22528e6631415dd91d243f0ebc 338 Gene3D G3DSA:3.20.20.70 68 327 1.9E-74 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS10505 8a092989443655fa4d2965e5821f826b 121 Pfam PF01527 Transposase 8 87 5.2E-27 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS10505 8a092989443655fa4d2965e5821f826b 121 Gene3D G3DSA:1.10.10.60 14 102 8.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS10505 8a092989443655fa4d2965e5821f826b 121 PANTHER PTHR37936 1 121 2.6E-35 T 23-04-2016 RBRH_RS10505 8a092989443655fa4d2965e5821f826b 121 SUPERFAMILY SSF46689 10 103 1.16E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS16160 b89d339ca40ed7860d3031c2ad742c2f 164 SUPERFAMILY SSF47413 15 76 3.94E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS16160 b89d339ca40ed7860d3031c2ad742c2f 164 Gene3D G3DSA:1.10.260.40 16 79 1.4E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS01830 730f58f398662629c01b21e83557ba75 280 PANTHER PTHR23088 18 277 9.3E-98 T 23-04-2016 RBRH_RS01830 730f58f398662629c01b21e83557ba75 280 Pfam PF00795 Carbon-nitrogen hydrolase 18 269 1.5E-56 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RBRH_RS01830 730f58f398662629c01b21e83557ba75 280 Gene3D G3DSA:3.60.110.10 13 277 5.4E-84 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RBRH_RS01830 730f58f398662629c01b21e83557ba75 280 PANTHER PTHR23088:SF27 18 277 9.3E-98 T 23-04-2016 RBRH_RS01830 730f58f398662629c01b21e83557ba75 280 SUPERFAMILY SSF56317 14 277 9.81E-82 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RBRH_RS05735 57104fe0c7c39812d583c4bffe4b57ce 198 TIGRFAM TIGR00615 recR: recombination protein RecR 4 196 1.3E-69 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RBRH_RS05735 57104fe0c7c39812d583c4bffe4b57ce 198 SUPERFAMILY SSF111304 4 198 2.62E-72 T 23-04-2016 IPR023627 Recombination protein RecR RBRH_RS05735 57104fe0c7c39812d583c4bffe4b57ce 198 SMART SM00493 80 165 4.7E-7 T 23-04-2016 IPR006171 Toprim domain RBRH_RS05735 57104fe0c7c39812d583c4bffe4b57ce 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 23-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 RBRH_RS05735 57104fe0c7c39812d583c4bffe4b57ce 198 PANTHER PTHR30446:SF0 1 198 1.9E-94 T 23-04-2016 RBRH_RS05735 57104fe0c7c39812d583c4bffe4b57ce 198 Pfam PF02132 RecR protein 40 78 1.0E-13 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger RBRH_RS05735 57104fe0c7c39812d583c4bffe4b57ce 198 PANTHER PTHR30446 1 198 1.9E-94 T 23-04-2016 RBRH_RS05735 57104fe0c7c39812d583c4bffe4b57ce 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 96.797 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RBRH_RS05735 57104fe0c7c39812d583c4bffe4b57ce 198 Pfam PF13662 Toprim domain 82 171 1.5E-21 T 23-04-2016 IPR006171 Toprim domain RBRH_RS06980 d764f62e608bdf33bb70f6bc3e5124ba 79 SUPERFAMILY SSF55729 9 67 2.24E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS06980 d764f62e608bdf33bb70f6bc3e5124ba 79 Gene3D G3DSA:3.40.630.30 9 67 2.9E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 Gene3D G3DSA:1.10.3810.10 94 269 9.8E-75 T 23-04-2016 RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 Pfam PF00905 Penicillin binding protein transpeptidase domain 460 706 7.7E-33 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 PANTHER PTHR32282 18 348 7.0E-227 T 23-04-2016 RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 PANTHER PTHR32282 454 757 7.0E-227 T 23-04-2016 RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 103 743 1.1E-181 T 23-04-2016 RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 SUPERFAMILY SSF56601 249 271 2.62E-110 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 SUPERFAMILY SSF56601 300 351 2.62E-110 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 SUPERFAMILY SSF56601 455 760 2.62E-110 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 Pfam PF17092 Penicillin-binding protein OB-like domain 354 458 1.6E-18 T 23-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 Gene3D G3DSA:2.40.50.140 385 454 4.9E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 Gene3D G3DSA:3.40.710.10 455 761 2.2E-121 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 Gene3D G3DSA:3.40.710.10 270 351 2.2E-121 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 SUPERFAMILY SSF53955 80 293 2.64E-77 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 Pfam PF00912 Transglycosylase 95 267 8.2E-64 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 PANTHER PTHR32282:SF5 18 348 7.0E-227 T 23-04-2016 RBRH_RS07540 1803c32a071d647ec3f7305162426fad 830 PANTHER PTHR32282:SF5 454 757 7.0E-227 T 23-04-2016 RBRH_RS06045 b7073f4df026e808804e980a1bb8c11e 382 PIRSF PIRSF000390 5 381 2.4E-102 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RBRH_RS06045 b7073f4df026e808804e980a1bb8c11e 382 PANTHER PTHR30244 1 380 4.9E-127 T 23-04-2016 RBRH_RS06045 b7073f4df026e808804e980a1bb8c11e 382 SUPERFAMILY SSF53383 8 378 1.34E-101 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS06045 b7073f4df026e808804e980a1bb8c11e 382 PANTHER PTHR30244:SF3 1 380 4.9E-127 T 23-04-2016 RBRH_RS06045 b7073f4df026e808804e980a1bb8c11e 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 373 8.2E-113 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RBRH_RS06045 b7073f4df026e808804e980a1bb8c11e 382 Gene3D G3DSA:3.90.1150.10 249 378 1.5E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS06045 b7073f4df026e808804e980a1bb8c11e 382 Gene3D G3DSA:3.40.640.10 9 247 1.7E-76 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS07475 b4f1399b1f097afc1573b0e4ef8648c5 143 SUPERFAMILY SSF160719 35 127 3.4E-20 T 23-04-2016 RBRH_RS07475 b4f1399b1f097afc1573b0e4ef8648c5 143 Pfam PF04965 Gene 25-like lysozyme 35 121 1.0E-15 T 23-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD RBRH_RS07475 b4f1399b1f097afc1573b0e4ef8648c5 143 Gene3D G3DSA:3.10.450.40 3 138 1.8E-33 T 23-04-2016 RBRH_RS07475 b4f1399b1f097afc1573b0e4ef8648c5 143 PANTHER PTHR35862:SF2 1 130 6.8E-13 T 23-04-2016 RBRH_RS07475 b4f1399b1f097afc1573b0e4ef8648c5 143 PANTHER PTHR35862 1 130 6.8E-13 T 23-04-2016 RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 Hamap MF_00367 GTPase Era [era]. 10 299 33.791 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 PANTHER PTHR11649 11 300 4.9E-102 T 23-04-2016 RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 Gene3D G3DSA:3.30.300.20 196 295 1.6E-34 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 83 101 2.0E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 15 35 2.0E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 Pfam PF01926 50S ribosome-binding GTPase 15 128 4.1E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 13 282 9.1E-80 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 SUPERFAMILY SSF52540 15 209 6.61E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 SUPERFAMILY SSF54814 185 300 5.62E-38 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 PANTHER PTHR11649:SF3 11 300 4.9E-102 T 23-04-2016 RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 Pfam PF07650 KH domain 212 287 6.8E-15 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 Gene3D G3DSA:3.40.50.300 14 195 1.5E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03380 e330fd5b47ac37f33826a24fbbce6512 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 172 3.5E-28 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RBRH_RS11020 91ba100f10036de2e25ffd79a2a05439 116 SUPERFAMILY SSF69754 1 108 4.58E-32 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RBRH_RS11020 91ba100f10036de2e25ffd79a2a05439 116 PANTHER PTHR33231 1 104 7.6E-29 T 23-04-2016 RBRH_RS11020 91ba100f10036de2e25ffd79a2a05439 116 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 7.6E-24 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RBRH_RS11020 91ba100f10036de2e25ffd79a2a05439 116 Gene3D G3DSA:3.30.160.100 1 100 1.7E-32 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RBRH_RS11020 91ba100f10036de2e25ffd79a2a05439 116 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 6.3E-28 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RBRH_RS11855 6cc13c1aee00afbfe3092c6f4ee5e65d 228 PANTHER PTHR41536:SF1 2 228 4.5E-107 T 23-04-2016 RBRH_RS11855 6cc13c1aee00afbfe3092c6f4ee5e65d 228 PANTHER PTHR41536 2 228 4.5E-107 T 23-04-2016 RBRH_RS11855 6cc13c1aee00afbfe3092c6f4ee5e65d 228 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 86 178 3.0E-13 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RBRH_RS11855 6cc13c1aee00afbfe3092c6f4ee5e65d 228 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 228 45.611 T 23-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 RBRH_RS11855 6cc13c1aee00afbfe3092c6f4ee5e65d 228 SUPERFAMILY SSF51197 3 177 3.71E-6 T 23-04-2016 RBRH_RS11855 6cc13c1aee00afbfe3092c6f4ee5e65d 228 SMART SM00702 1 179 5.3E-19 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 Pfam PF00203 Ribosomal protein S19 3 83 2.1E-37 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 PIRSF PIRSF002144 1 91 6.5E-33 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 SUPERFAMILY SSF54570 3 84 5.89E-35 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.5E-45 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.669 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 PANTHER PTHR11880 1 91 9.4E-54 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.0E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.0E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.0E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04415 d41fab4166231418502e3478934a3ebe 91 Gene3D G3DSA:3.30.860.10 1 90 1.6E-41 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RBRH_RS10335 811df05673c22dc1dc731882eb7b808c 289 PANTHER PTHR30565 2 277 4.0E-130 T 23-04-2016 RBRH_RS10335 811df05673c22dc1dc731882eb7b808c 289 Gene3D G3DSA:1.20.1260.10 1 199 1.0E-77 T 23-04-2016 IPR012347 Ferritin-related RBRH_RS10335 811df05673c22dc1dc731882eb7b808c 289 SUPERFAMILY SSF47240 1 285 6.57E-84 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS10335 811df05673c22dc1dc731882eb7b808c 289 Pfam PF05067 Manganese containing catalase 1 285 2.2E-87 T 23-04-2016 IPR007760 Manganese catalase RBRH_RS10335 811df05673c22dc1dc731882eb7b808c 289 PANTHER PTHR30565:SF3 2 277 4.0E-130 T 23-04-2016 RBRH_RS12135 2e05e9857812254f37493565b1b6c7d8 385 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.3E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS12135 2e05e9857812254f37493565b1b6c7d8 385 SUPERFAMILY SSF46785 3 112 1.63E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS12135 2e05e9857812254f37493565b1b6c7d8 385 PANTHER PTHR30537 1 311 1.7E-113 T 23-04-2016 RBRH_RS12135 2e05e9857812254f37493565b1b6c7d8 385 Gene3D G3DSA:1.10.10.10 3 82 4.5E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS12135 2e05e9857812254f37493565b1b6c7d8 385 Pfam PF03466 LysR substrate binding domain 89 294 3.7E-41 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS12135 2e05e9857812254f37493565b1b6c7d8 385 SUPERFAMILY SSF53850 89 298 1.77E-42 T 23-04-2016 RBRH_RS12135 2e05e9857812254f37493565b1b6c7d8 385 Gene3D G3DSA:3.40.190.10 92 178 1.8E-17 T 23-04-2016 RBRH_RS12135 2e05e9857812254f37493565b1b6c7d8 385 PANTHER PTHR30537:SF5 1 311 1.7E-113 T 23-04-2016 RBRH_RS12135 2e05e9857812254f37493565b1b6c7d8 385 Gene3D G3DSA:3.40.190.10 179 262 1.2E-21 T 23-04-2016 RBRH_RS03210 84cbd88aa61417c318659583ba8bf0bb 220 SUPERFAMILY SSF100950 49 217 3.68E-39 T 23-04-2016 RBRH_RS03210 84cbd88aa61417c318659583ba8bf0bb 220 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 121 217 4.9E-26 T 23-04-2016 IPR003741 LUD domain RBRH_RS03210 84cbd88aa61417c318659583ba8bf0bb 220 PANTHER PTHR32479 1 219 4.8E-24 T 23-04-2016 RBRH_RS03210 84cbd88aa61417c318659583ba8bf0bb 220 PANTHER PTHR32479:SF11 1 219 4.8E-24 T 23-04-2016 RBRH_RS03210 84cbd88aa61417c318659583ba8bf0bb 220 Gene3D G3DSA:3.40.50.10420 50 217 3.8E-44 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RBRH_RS01380 32b63cafcb2421cc9fccc3485bbadf10 418 Gene3D G3DSA:3.30.450.90 16 135 6.7E-42 T 23-04-2016 RBRH_RS01380 32b63cafcb2421cc9fccc3485bbadf10 418 SMART SM00382 163 286 7.2E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS01380 32b63cafcb2421cc9fccc3485bbadf10 418 Gene3D G3DSA:3.40.50.300 141 416 1.1E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01380 32b63cafcb2421cc9fccc3485bbadf10 418 PANTHER PTHR30258:SF1 26 415 4.3E-160 T 23-04-2016 RBRH_RS01380 32b63cafcb2421cc9fccc3485bbadf10 418 Pfam PF00437 Type II/IV secretion system protein 43 302 3.0E-72 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RBRH_RS01380 32b63cafcb2421cc9fccc3485bbadf10 418 PANTHER PTHR30258 26 415 4.3E-160 T 23-04-2016 RBRH_RS01380 32b63cafcb2421cc9fccc3485bbadf10 418 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 230 244 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RBRH_RS01380 32b63cafcb2421cc9fccc3485bbadf10 418 SUPERFAMILY SSF52540 25 414 3.73E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09290 c8be3391754bc47602f47f07d40fc645 85 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 76 6.2E-8 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RBRH_RS09290 c8be3391754bc47602f47f07d40fc645 85 PANTHER PTHR33755 1 85 2.7E-12 T 23-04-2016 RBRH_RS09290 c8be3391754bc47602f47f07d40fc645 85 PANTHER PTHR33755:SF6 1 85 2.7E-12 T 23-04-2016 RBRH_RS09290 c8be3391754bc47602f47f07d40fc645 85 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 80 3.6E-13 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RBRH_RS04730 cd51c4d719eaf674bd7005919bc7930f 308 Gene3D G3DSA:3.40.50.300 2 224 3.2E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04730 cd51c4d719eaf674bd7005919bc7930f 308 SMART SM00382 28 217 1.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS04730 cd51c4d719eaf674bd7005919bc7930f 308 Pfam PF00005 ABC transporter 19 161 7.7E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS04730 cd51c4d719eaf674bd7005919bc7930f 308 SUPERFAMILY SSF52540 2 227 5.01E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04730 cd51c4d719eaf674bd7005919bc7930f 308 PANTHER PTHR24220 5 230 4.1E-99 T 23-04-2016 RBRH_RS04730 cd51c4d719eaf674bd7005919bc7930f 308 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS04730 cd51c4d719eaf674bd7005919bc7930f 308 PANTHER PTHR24220:SF305 5 230 4.1E-99 T 23-04-2016 RBRH_RS00465 35b8a95f520b1164cc1c711620b8f2bf 175 PANTHER PTHR21028:SF2 1 175 1.9E-47 T 23-04-2016 RBRH_RS00465 35b8a95f520b1164cc1c711620b8f2bf 175 Gene3D G3DSA:2.40.320.10 3 171 2.9E-38 T 23-04-2016 IPR023577 CYTH domain RBRH_RS00465 35b8a95f520b1164cc1c711620b8f2bf 175 PANTHER PTHR21028 1 175 1.9E-47 T 23-04-2016 RBRH_RS00465 35b8a95f520b1164cc1c711620b8f2bf 175 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 5 135 1.0E-4 T 23-04-2016 RBRH_RS00465 35b8a95f520b1164cc1c711620b8f2bf 175 SMART SM01118 2 171 7.6E-17 T 23-04-2016 IPR023577 CYTH domain RBRH_RS00465 35b8a95f520b1164cc1c711620b8f2bf 175 SUPERFAMILY SSF55154 3 169 1.37E-32 T 23-04-2016 IPR033469 CYTH-like domain RBRH_RS00465 35b8a95f520b1164cc1c711620b8f2bf 175 Pfam PF01928 CYTH domain 3 165 1.6E-17 T 23-04-2016 IPR023577 CYTH domain RBRH_RS11725 a3e34272e52a7609d7bf92f80748c1a3 381 Pfam PF13458 Periplasmic binding protein 31 355 3.5E-63 T 23-04-2016 IPR028081 Leucine-binding protein domain RBRH_RS11725 a3e34272e52a7609d7bf92f80748c1a3 381 Gene3D G3DSA:3.40.50.2300 31 231 4.9E-68 T 23-04-2016 RBRH_RS11725 a3e34272e52a7609d7bf92f80748c1a3 381 PANTHER PTHR30483 13 381 4.7E-88 T 23-04-2016 RBRH_RS11725 a3e34272e52a7609d7bf92f80748c1a3 381 PANTHER PTHR30483:SF20 13 381 4.7E-88 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RBRH_RS11725 a3e34272e52a7609d7bf92f80748c1a3 381 SUPERFAMILY SSF53822 31 374 2.8E-98 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RBRH_RS12150 87861bb5a829bc05249d5463d2df850e 338 Pfam PF00892 EamA-like transporter family 38 172 6.0E-15 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RBRH_RS12150 87861bb5a829bc05249d5463d2df850e 338 Pfam PF00892 EamA-like transporter family 183 312 8.5E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RBRH_RS12150 87861bb5a829bc05249d5463d2df850e 338 SUPERFAMILY SSF103481 216 316 1.83E-13 T 23-04-2016 RBRH_RS12150 87861bb5a829bc05249d5463d2df850e 338 PANTHER PTHR22911 19 323 5.0E-54 T 23-04-2016 RBRH_RS12150 87861bb5a829bc05249d5463d2df850e 338 SUPERFAMILY SSF103481 74 172 1.28E-9 T 23-04-2016 RBRH_RS11960 6ef29aa7ab3afb153030e44648fc97e2 242 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 17 200 9.5E-48 T 23-04-2016 IPR010237 Pyrimidine 5-nucleotidase RBRH_RS11960 6ef29aa7ab3afb153030e44648fc97e2 242 SUPERFAMILY SSF56784 17 204 6.28E-28 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS11960 6ef29aa7ab3afb153030e44648fc97e2 242 Pfam PF13419 Haloacid dehalogenase-like hydrolase 19 200 1.2E-10 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS11960 6ef29aa7ab3afb153030e44648fc97e2 242 Gene3D G3DSA:3.40.50.1000 18 203 9.7E-23 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS11960 6ef29aa7ab3afb153030e44648fc97e2 242 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 18 201 4.5E-12 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RBRH_RS11960 6ef29aa7ab3afb153030e44648fc97e2 242 PANTHER PTHR12725 1 199 3.4E-23 T 23-04-2016 RBRH_RS11960 6ef29aa7ab3afb153030e44648fc97e2 242 PANTHER PTHR12725:SF79 1 199 3.4E-23 T 23-04-2016 RBRH_RS03640 ee79d7f632e3a290daa892f14af164de 301 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 37 299 1.1E-81 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 RBRH_RS03640 ee79d7f632e3a290daa892f14af164de 301 PANTHER PTHR30425 24 301 1.4E-117 T 23-04-2016 RBRH_RS03640 ee79d7f632e3a290daa892f14af164de 301 SUPERFAMILY SSF161098 40 294 3.79E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS03640 ee79d7f632e3a290daa892f14af164de 301 PANTHER PTHR30425:SF0 24 301 1.4E-117 T 23-04-2016 RBRH_RS03640 ee79d7f632e3a290daa892f14af164de 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 298 1.4E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS03640 ee79d7f632e3a290daa892f14af164de 301 Gene3D G3DSA:1.10.3720.10 32 300 1.3E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS10785 9d131f2b70301af1df3a489499cd6d0b 254 PANTHER PTHR11941 2 250 8.0E-84 T 23-04-2016 RBRH_RS10785 9d131f2b70301af1df3a489499cd6d0b 254 SUPERFAMILY SSF52096 3 252 5.24E-77 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS10785 9d131f2b70301af1df3a489499cd6d0b 254 PANTHER PTHR11941:SF17 2 250 8.0E-84 T 23-04-2016 RBRH_RS10785 9d131f2b70301af1df3a489499cd6d0b 254 Gene3D G3DSA:3.90.226.10 2 251 3.7E-76 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS10785 9d131f2b70301af1df3a489499cd6d0b 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 251 5.4E-60 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 37.466 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 432 753 1.4E-153 T 23-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 756 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 SUPERFAMILY SSF51726 3 394 2.49E-107 T 23-04-2016 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 Gene3D G3DSA:3.20.20.210 4 389 2.5E-150 T 23-04-2016 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 PANTHER PTHR30519:SF0 1 756 0.0 T 23-04-2016 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 Gene3D G3DSA:3.20.20.210 392 756 4.6E-134 T 23-04-2016 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 SUPERFAMILY SSF51726 396 756 2.22E-121 T 23-04-2016 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 PANTHER PTHR30519 1 756 0.0 T 23-04-2016 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 314 1.9E-114 T 23-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 RBRH_RS00275 02cbd0bd938f9151476a42847254947f 759 PIRSF PIRSF000382 1 759 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 RBRH_RS02825 bac463f9fd37977668c1b17073f057d3 193 Pfam PF01169 Uncharacterized protein family UPF0016 9 81 2.9E-20 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RBRH_RS02825 bac463f9fd37977668c1b17073f057d3 193 Pfam PF01169 Uncharacterized protein family UPF0016 107 181 1.2E-22 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RBRH_RS02825 bac463f9fd37977668c1b17073f057d3 193 PANTHER PTHR12608 12 192 3.3E-29 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RBRH_RS05720 0ab713fd99b5e128a551e070719a8f24 108 PIRSF PIRSF000077 2 108 4.0E-44 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RBRH_RS05720 0ab713fd99b5e128a551e070719a8f24 108 Gene3D G3DSA:3.40.30.10 2 107 2.0E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS05720 0ab713fd99b5e128a551e070719a8f24 108 SUPERFAMILY SSF52833 3 108 6.71E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS05720 0ab713fd99b5e128a551e070719a8f24 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 8.5E-38 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RBRH_RS05720 0ab713fd99b5e128a551e070719a8f24 108 Pfam PF00085 Thioredoxin 5 106 2.3E-34 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 RBRH_RS05720 0ab713fd99b5e128a551e070719a8f24 108 PANTHER PTHR10438 4 108 4.4E-40 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RBRH_RS05720 0ab713fd99b5e128a551e070719a8f24 108 PRINTS PR00421 Thioredoxin family signature 24 32 2.0E-9 T 23-04-2016 RBRH_RS05720 0ab713fd99b5e128a551e070719a8f24 108 PRINTS PR00421 Thioredoxin family signature 32 41 2.0E-9 T 23-04-2016 RBRH_RS05720 0ab713fd99b5e128a551e070719a8f24 108 PRINTS PR00421 Thioredoxin family signature 72 83 2.0E-9 T 23-04-2016 RBRH_RS05720 0ab713fd99b5e128a551e070719a8f24 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RBRH_RS02470 9ac60397794f9f6691593d89983186ce 303 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 290 19.686 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RBRH_RS02470 9ac60397794f9f6691593d89983186ce 303 PANTHER PTHR30589 1 292 2.1E-99 T 23-04-2016 RBRH_RS02470 9ac60397794f9f6691593d89983186ce 303 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 285 1.4E-76 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RBRH_RS02470 9ac60397794f9f6691593d89983186ce 303 PANTHER PTHR30589:SF0 1 292 2.1E-99 T 23-04-2016 RBRH_RS02470 9ac60397794f9f6691593d89983186ce 303 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RBRH_RS02470 9ac60397794f9f6691593d89983186ce 303 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 290 9.1E-83 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PANTHER PTHR24322 50 178 5.8E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PANTHER PTHR24322 194 226 5.8E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 4.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 4.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 4.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 4.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 47 64 4.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 4.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PANTHER PTHR24322:SF105 50 178 5.8E-65 T 23-04-2016 RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PANTHER PTHR24322:SF105 194 226 5.8E-65 T 23-04-2016 RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 Gene3D G3DSA:3.40.50.720 41 285 1.1E-88 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 SUPERFAMILY SSF51735 45 285 5.63E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 55 284 6.9E-65 T 23-04-2016 RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 3.7E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 3.7E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11615 1df14160abbc3730b3e7f7bfed50f5eb 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 3.7E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS14275 d57f21eb29e9446af3963ed54cce032c 118 Pfam PF00920 Dehydratase family 8 117 3.8E-39 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RBRH_RS14275 d57f21eb29e9446af3963ed54cce032c 118 PANTHER PTHR21000 8 118 6.2E-57 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RBRH_RS14275 d57f21eb29e9446af3963ed54cce032c 118 PANTHER PTHR21000:SF5 8 118 6.2E-57 T 23-04-2016 RBRH_RS14275 d57f21eb29e9446af3963ed54cce032c 118 SUPERFAMILY SSF143975 8 117 1.7E-41 T 23-04-2016 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 508 1.5E-197 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 PANTHER PTHR22594 18 510 3.4E-261 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 Gene3D G3DSA:3.30.930.10 158 505 5.5E-114 T 23-04-2016 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 263 280 3.4E-37 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 210 3.4E-37 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 3.4E-37 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 245 258 3.4E-37 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 216 232 3.4E-37 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 PANTHER PTHR22594:SF4 18 510 3.4E-261 T 23-04-2016 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 163 506 7.5E-83 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 Gene3D G3DSA:2.40.50.140 18 155 9.1E-45 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 SUPERFAMILY SSF50249 18 156 5.36E-41 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 Pfam PF01336 OB-fold nucleic acid binding domain 70 146 3.8E-13 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 SUPERFAMILY SSF55681 163 507 3.13E-116 T 23-04-2016 RBRH_RS08260 640b496cf466360787dca6169df21c3c 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 23 509 43.61 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RBRH_RS06935 32c7277d66e0ab8f9a969169271721ee 145 Gene3D G3DSA:3.40.50.2300 15 138 1.4E-31 T 23-04-2016 RBRH_RS06935 32c7277d66e0ab8f9a969169271721ee 145 PANTHER PTHR26402 17 132 6.3E-28 T 23-04-2016 RBRH_RS06935 32c7277d66e0ab8f9a969169271721ee 145 SMART SM00448 17 130 8.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS06935 32c7277d66e0ab8f9a969169271721ee 145 Pfam PF00072 Response regulator receiver domain 19 130 1.8E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS06935 32c7277d66e0ab8f9a969169271721ee 145 SUPERFAMILY SSF52172 15 139 2.99E-33 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS16330 d4eb8ef0185fb2d763c242b0cfc56fd9 556 PANTHER PTHR35861:SF1 357 551 3.1E-47 T 23-04-2016 RBRH_RS16330 d4eb8ef0185fb2d763c242b0cfc56fd9 556 PANTHER PTHR35861 357 551 3.1E-47 T 23-04-2016 RBRH_RS16330 d4eb8ef0185fb2d763c242b0cfc56fd9 556 Pfam PF04984 Phage tail sheath protein 4 549 3.0E-38 T 23-04-2016 IPR007067 Tail sheath protein RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 179 2.6E-33 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 SUPERFAMILY SSF47928 3 110 3.66E-20 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 182 18.059 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 PRINTS PR00125 ATP synthase delta subunit signature 140 155 6.4E-25 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 PRINTS PR00125 ATP synthase delta subunit signature 155 173 6.4E-25 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 PRINTS PR00125 ATP synthase delta subunit signature 7 26 6.4E-25 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 PRINTS PR00125 ATP synthase delta subunit signature 90 104 6.4E-25 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 PRINTS PR00125 ATP synthase delta subunit signature 79 90 6.4E-25 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 PANTHER PTHR11910 7 180 1.7E-33 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 180 3.4E-44 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RBRH_RS00530 efc25796a29409d698ca30b6a4ace855 182 Gene3D G3DSA:1.10.520.20 2 110 1.3E-25 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RBRH_RS01865 f36af78dcc2c095f3a6769eda4748ae3 135 SMART SM00363 13 71 7.8E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS01865 f36af78dcc2c095f3a6769eda4748ae3 135 Pfam PF01479 S4 domain 14 59 1.3E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS01865 f36af78dcc2c095f3a6769eda4748ae3 135 Gene3D G3DSA:3.10.290.10 12 110 1.0E-28 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS01865 f36af78dcc2c095f3a6769eda4748ae3 135 SUPERFAMILY SSF55174 11 108 3.66E-25 T 23-04-2016 RBRH_RS01865 f36af78dcc2c095f3a6769eda4748ae3 135 PIRSF PIRSF016821 10 135 4.0E-38 T 23-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 RBRH_RS11690 12547b38816955cacc3f27c042ae908d 231 SUPERFAMILY SSF53098 4 186 5.38E-26 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS11690 12547b38816955cacc3f27c042ae908d 231 Gene3D G3DSA:3.30.420.10 4 189 1.2E-10 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS04270 586a185cb6a1a4ff1461bb6296ad6ee6 88 SUPERFAMILY SSF46689 2 73 3.23E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS04270 586a185cb6a1a4ff1461bb6296ad6ee6 88 Gene3D G3DSA:1.10.10.60 7 84 3.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS04270 586a185cb6a1a4ff1461bb6296ad6ee6 88 Pfam PF01527 Transposase 2 71 4.3E-20 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS04270 586a185cb6a1a4ff1461bb6296ad6ee6 88 PANTHER PTHR33609 2 87 3.0E-35 T 23-04-2016 RBRH_RS01680 586a185cb6a1a4ff1461bb6296ad6ee6 88 SUPERFAMILY SSF46689 2 73 3.23E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS01680 586a185cb6a1a4ff1461bb6296ad6ee6 88 Gene3D G3DSA:1.10.10.60 7 84 3.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS01680 586a185cb6a1a4ff1461bb6296ad6ee6 88 Pfam PF01527 Transposase 2 71 4.3E-20 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS01680 586a185cb6a1a4ff1461bb6296ad6ee6 88 PANTHER PTHR33609 2 87 3.0E-35 T 23-04-2016 RBRH_RS00775 586a185cb6a1a4ff1461bb6296ad6ee6 88 SUPERFAMILY SSF46689 2 73 3.23E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS00775 586a185cb6a1a4ff1461bb6296ad6ee6 88 Gene3D G3DSA:1.10.10.60 7 84 3.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS00775 586a185cb6a1a4ff1461bb6296ad6ee6 88 Pfam PF01527 Transposase 2 71 4.3E-20 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS00775 586a185cb6a1a4ff1461bb6296ad6ee6 88 PANTHER PTHR33609 2 87 3.0E-35 T 23-04-2016 RBRH_RS04220 586a185cb6a1a4ff1461bb6296ad6ee6 88 SUPERFAMILY SSF46689 2 73 3.23E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS04220 586a185cb6a1a4ff1461bb6296ad6ee6 88 Gene3D G3DSA:1.10.10.60 7 84 3.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS04220 586a185cb6a1a4ff1461bb6296ad6ee6 88 Pfam PF01527 Transposase 2 71 4.3E-20 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS04220 586a185cb6a1a4ff1461bb6296ad6ee6 88 PANTHER PTHR33609 2 87 3.0E-35 T 23-04-2016 RBRH_RS06740 b9b05672f11f46d02c81bfb5ee6dcacb 402 Gene3D G3DSA:3.20.20.80 80 304 5.1E-10 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RBRH_RS06740 b9b05672f11f46d02c81bfb5ee6dcacb 402 Pfam PF02839 Carbohydrate binding domain 361 399 1.6E-10 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RBRH_RS06740 b9b05672f11f46d02c81bfb5ee6dcacb 402 PANTHER PTHR11177:SF203 2 303 8.8E-70 T 23-04-2016 RBRH_RS06740 b9b05672f11f46d02c81bfb5ee6dcacb 402 Gene3D G3DSA:2.10.10.20 361 402 2.1E-16 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RBRH_RS06740 b9b05672f11f46d02c81bfb5ee6dcacb 402 SUPERFAMILY SSF51445 29 306 8.31E-23 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily RBRH_RS06740 b9b05672f11f46d02c81bfb5ee6dcacb 402 PANTHER PTHR11177 2 303 8.8E-70 T 23-04-2016 RBRH_RS06740 b9b05672f11f46d02c81bfb5ee6dcacb 402 SUPERFAMILY SSF51055 361 401 2.49E-13 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RBRH_RS06740 b9b05672f11f46d02c81bfb5ee6dcacb 402 Pfam PF00704 Glycosyl hydrolases family 18 90 267 1.0E-10 T 23-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 RBRH_RS06740 b9b05672f11f46d02c81bfb5ee6dcacb 402 SMART SM00495 360 402 6.4E-12 T 23-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 RBRH_RS01445 5790a4886660810d4c76d4e1fbc56f67 182 Pfam PF00156 Phosphoribosyl transferase domain 13 163 2.4E-17 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RBRH_RS01445 5790a4886660810d4c76d4e1fbc56f67 182 SUPERFAMILY SSF53271 14 181 4.33E-42 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS01445 5790a4886660810d4c76d4e1fbc56f67 182 PANTHER PTHR22573 14 179 1.1E-35 T 23-04-2016 RBRH_RS01445 5790a4886660810d4c76d4e1fbc56f67 182 Gene3D G3DSA:3.40.50.2020 13 180 4.8E-48 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS01445 5790a4886660810d4c76d4e1fbc56f67 182 PANTHER PTHR22573:SF56 14 179 1.1E-35 T 23-04-2016 RBRH_RS08730 17d249d83cf35592ede29586e444e500 406 PIRSF PIRSF001434 6 406 3.1E-128 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RBRH_RS08730 17d249d83cf35592ede29586e444e500 406 Gene3D G3DSA:3.40.640.10 18 266 4.0E-88 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS08730 17d249d83cf35592ede29586e444e500 406 SUPERFAMILY SSF53383 40 405 7.58E-117 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS08730 17d249d83cf35592ede29586e444e500 406 PANTHER PTHR11808 7 405 4.0E-195 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RBRH_RS08730 17d249d83cf35592ede29586e444e500 406 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 18 404 2.6E-171 T 23-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 RBRH_RS08730 17d249d83cf35592ede29586e444e500 406 Gene3D G3DSA:3.90.1150.10 267 405 2.6E-47 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS08730 17d249d83cf35592ede29586e444e500 406 PANTHER PTHR11808:SF36 7 405 4.0E-195 T 23-04-2016 RBRH_RS08730 17d249d83cf35592ede29586e444e500 406 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 404 8.3E-138 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RBRH_RS08730 17d249d83cf35592ede29586e444e500 406 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 209 223 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 SUPERFAMILY SSF53335 141 427 5.93E-71 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 Gene3D G3DSA:3.40.50.150 218 426 2.5E-54 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 247 2.1E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 306 318 2.1E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 409 426 2.1E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 208 222 2.1E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 356 372 2.1E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 PANTHER PTHR22807 101 427 1.2E-86 T 23-04-2016 RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 Pfam PF01189 16S rRNA methyltransferase RsmB/F 227 423 1.7E-50 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 Gene3D G3DSA:3.30.70.1170 159 216 1.1E-17 T 23-04-2016 RBRH_RS02275 673676b825e18d119b96f0d127b806b5 428 PANTHER PTHR22807:SF33 101 427 1.2E-86 T 23-04-2016 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 Gene3D G3DSA:3.40.50.620 241 274 8.2E-84 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 Gene3D G3DSA:3.40.50.620 4 170 8.2E-84 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 SUPERFAMILY SSF52374 3 172 4.69E-84 T 23-04-2016 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 SUPERFAMILY SSF52374 243 397 4.69E-84 T 23-04-2016 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 Gene3D G3DSA:1.10.240.10 275 365 1.1E-30 T 23-04-2016 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.6E-22 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.6E-22 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 1.6E-22 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 173 1.8E-56 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 Pfam PF00579 tRNA synthetases class I (W and Y) 244 342 3.0E-9 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 9.8E-46 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 PANTHER PTHR10055 242 399 9.8E-150 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 PANTHER PTHR10055 5 171 9.8E-150 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 PANTHER PTHR10055:SF6 242 399 9.8E-150 T 23-04-2016 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 PANTHER PTHR10055:SF6 5 171 9.8E-150 T 23-04-2016 RBRH_RS08145 b2754b3fad06692d15d184a06834720f 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS01930 f161a6c3205119e94a8d75726785a95d 343 PANTHER PTHR11088 216 322 5.2E-104 T 23-04-2016 RBRH_RS01930 f161a6c3205119e94a8d75726785a95d 343 PANTHER PTHR11088 10 191 5.2E-104 T 23-04-2016 RBRH_RS01930 f161a6c3205119e94a8d75726785a95d 343 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 338 29.667 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RBRH_RS01930 f161a6c3205119e94a8d75726785a95d 343 Gene3D G3DSA:1.10.287.890 233 315 1.4E-34 T 23-04-2016 RBRH_RS01930 f161a6c3205119e94a8d75726785a95d 343 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 181 1.0E-65 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RBRH_RS01930 f161a6c3205119e94a8d75726785a95d 343 Pfam PF01715 IPP transferase 41 317 8.2E-91 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RBRH_RS01930 f161a6c3205119e94a8d75726785a95d 343 SUPERFAMILY SSF52540 9 150 2.9E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01930 f161a6c3205119e94a8d75726785a95d 343 Gene3D G3DSA:3.40.50.300 7 173 3.2E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03910 a9ab2e42d2cd4fad0537db9352c6bc4e 460 Pfam PF03237 Terminase-like family 127 447 1.4E-30 T 23-04-2016 IPR004921 Terminase, large subunit RBRH_RS03910 a9ab2e42d2cd4fad0537db9352c6bc4e 460 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 314 450 2.8E-24 T 23-04-2016 IPR006517 Archaeophage PsiM2, terminase large subunit RBRH_RS09155 5208b44231a303b9948f658ece45419f 187 Gene3D G3DSA:1.10.1740.10 4 77 4.2E-7 T 23-04-2016 RBRH_RS09155 5208b44231a303b9948f658ece45419f 187 Pfam PF08281 Sigma-70, region 4 125 172 4.5E-17 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS09155 5208b44231a303b9948f658ece45419f 187 Gene3D G3DSA:1.10.10.10 117 181 5.0E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS09155 5208b44231a303b9948f658ece45419f 187 PANTHER PTHR30173 4 182 8.4E-23 T 23-04-2016 RBRH_RS09155 5208b44231a303b9948f658ece45419f 187 SUPERFAMILY SSF88946 15 84 5.1E-7 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS09155 5208b44231a303b9948f658ece45419f 187 SUPERFAMILY SSF88659 116 180 2.43E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS09155 5208b44231a303b9948f658ece45419f 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 177 3.1E-18 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RBRH_RS15155 81ace3dffcc5260b3d2debe8f81b5c28 109 SUPERFAMILY SSF54106 2 38 1.96E-6 T 23-04-2016 IPR018392 LysM domain RBRH_RS15155 81ace3dffcc5260b3d2debe8f81b5c28 109 Gene3D G3DSA:3.10.350.10 2 37 2.1E-10 T 23-04-2016 IPR018392 LysM domain RBRH_RS15155 81ace3dffcc5260b3d2debe8f81b5c28 109 Pfam PF01476 LysM domain 3 34 1.1E-4 T 23-04-2016 IPR018392 LysM domain RBRH_RS03915 8bdaf21a6418d0c2d99267ad4e20487f 503 Pfam PF06381 Protein of unknown function (DUF1073) 97 452 4.3E-104 T 23-04-2016 IPR024459 Protein of unknown function DUF1073 RBRH_RS07135 12feb06ac7e2af3ab4a713bc1d378e2a 90 Gene3D G3DSA:4.10.520.10 1 90 4.4E-37 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RBRH_RS07135 12feb06ac7e2af3ab4a713bc1d378e2a 90 SUPERFAMILY SSF47729 1 90 5.15E-32 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RBRH_RS07135 12feb06ac7e2af3ab4a713bc1d378e2a 90 SMART SM00411 1 90 6.1E-40 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS07135 12feb06ac7e2af3ab4a713bc1d378e2a 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.6E-33 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS07135 12feb06ac7e2af3ab4a713bc1d378e2a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RBRH_RS07135 12feb06ac7e2af3ab4a713bc1d378e2a 90 PANTHER PTHR33175 1 90 3.5E-42 T 23-04-2016 RBRH_RS07135 12feb06ac7e2af3ab4a713bc1d378e2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.5E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS07135 12feb06ac7e2af3ab4a713bc1d378e2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.5E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS07135 12feb06ac7e2af3ab4a713bc1d378e2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.5E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS04810 9d36e8fe2673f4dcdf940a45cc00a5b9 175 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.2E-12 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RBRH_RS04810 9d36e8fe2673f4dcdf940a45cc00a5b9 175 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.2E-12 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RBRH_RS04810 9d36e8fe2673f4dcdf940a45cc00a5b9 175 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.2E-12 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RBRH_RS04810 9d36e8fe2673f4dcdf940a45cc00a5b9 175 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 75 5.5E-18 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RBRH_RS04810 9d36e8fe2673f4dcdf940a45cc00a5b9 175 PANTHER PTHR33162:SF4 1 83 7.8E-14 T 23-04-2016 RBRH_RS04810 9d36e8fe2673f4dcdf940a45cc00a5b9 175 PANTHER PTHR33162 1 83 7.8E-14 T 23-04-2016 RBRH_RS04810 9d36e8fe2673f4dcdf940a45cc00a5b9 175 Pfam PF02416 mttA/Hcf106 family 4 34 9.1E-8 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RBRH_RS04810 9d36e8fe2673f4dcdf940a45cc00a5b9 175 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 169 15.343 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RBRH_RS04355 c25109c4bafa67a8478d72615efb013d 647 Pfam PF16937 Type III secretion system translocator protein, HrpF 198 453 7.2E-121 T 23-04-2016 IPR031613 Pathogenicity locus protein HrpK RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 SMART SM00487 218 421 9.3E-14 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 TIGRFAM TIGR00595 priA: primosomal protein N' 244 761 6.9E-162 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 PANTHER PTHR30580 1 763 1.0E-204 T 23-04-2016 RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 Hamap MF_00983 Probable primosomal protein N' [priA]. 11 763 22.109 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 SUPERFAMILY SSF52540 239 390 1.92E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 SUPERFAMILY SSF52540 420 474 1.92E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 SUPERFAMILY SSF52540 537 633 1.92E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 Pfam PF00270 DEAD/DEAH box helicase 231 388 1.6E-12 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 Gene3D G3DSA:3.40.50.300 523 667 4.7E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 Gene3D G3DSA:3.40.50.300 441 462 4.7E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 Pfam PF00271 Helicase conserved C-terminal domain 550 623 2.4E-6 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 SMART SM00490 526 623 5.0E-8 T 23-04-2016 IPR001650 Helicase, C-terminal RBRH_RS00565 7b2aa008d305cc8d34cc1746f19bd999 763 Gene3D G3DSA:3.40.50.300 221 400 2.8E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10945 fee3c4bd36d3e94355d5997f02b74de6 180 PANTHER PTHR10302 3 180 2.4E-52 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RBRH_RS10945 fee3c4bd36d3e94355d5997f02b74de6 180 Gene3D G3DSA:2.40.50.140 1 122 2.9E-59 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS10945 fee3c4bd36d3e94355d5997f02b74de6 180 Gene3D G3DSA:2.40.50.140 160 180 2.9E-59 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS10945 fee3c4bd36d3e94355d5997f02b74de6 180 SUPERFAMILY SSF50249 3 180 4.8E-64 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS10945 fee3c4bd36d3e94355d5997f02b74de6 180 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 39.029 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RBRH_RS10945 fee3c4bd36d3e94355d5997f02b74de6 180 Pfam PF00436 Single-strand binding protein family 4 108 2.1E-42 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RBRH_RS10945 fee3c4bd36d3e94355d5997f02b74de6 180 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 180 1.2E-53 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RBRH_RS10180 27e482b4c5117979138bcb66c3e49c1b 190 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 25 155 5.9E-57 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RBRH_RS10180 27e482b4c5117979138bcb66c3e49c1b 190 PANTHER PTHR23046:SF2 23 185 3.3E-70 T 23-04-2016 RBRH_RS10180 27e482b4c5117979138bcb66c3e49c1b 190 Gene3D G3DSA:3.40.50.7700 18 156 1.2E-67 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RBRH_RS10180 27e482b4c5117979138bcb66c3e49c1b 190 Pfam PF00731 AIR carboxylase 25 155 9.1E-58 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RBRH_RS10180 27e482b4c5117979138bcb66c3e49c1b 190 SUPERFAMILY SSF52255 24 157 3.53E-59 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RBRH_RS10180 27e482b4c5117979138bcb66c3e49c1b 190 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 25 178 28.574 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RBRH_RS10180 27e482b4c5117979138bcb66c3e49c1b 190 PANTHER PTHR23046 23 185 3.3E-70 T 23-04-2016 RBRH_RS10180 27e482b4c5117979138bcb66c3e49c1b 190 SMART SM01001 23 182 6.2E-89 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RBRH_RS09910 c126c3666baab20587dd3d6ab6099d6b 227 PANTHER PTHR30413:SF9 1 223 2.4E-30 T 23-04-2016 RBRH_RS09910 c126c3666baab20587dd3d6ab6099d6b 227 PANTHER PTHR30413 1 223 2.4E-30 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS09910 c126c3666baab20587dd3d6ab6099d6b 227 Pfam PF01061 ABC-2 type transporter 3 188 1.2E-17 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RBRH_RS11185 845acb6701c664cd26a25a93df9e3c02 369 Pfam PF02628 Cytochrome oxidase assembly protein 32 345 1.2E-80 T 23-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 RBRH_RS11185 845acb6701c664cd26a25a93df9e3c02 369 PANTHER PTHR35457:SF1 260 369 2.9E-56 T 23-04-2016 RBRH_RS11185 845acb6701c664cd26a25a93df9e3c02 369 PANTHER PTHR35457:SF1 87 237 2.9E-56 T 23-04-2016 RBRH_RS11185 845acb6701c664cd26a25a93df9e3c02 369 PANTHER PTHR35457:SF1 4 71 2.9E-56 T 23-04-2016 RBRH_RS11185 845acb6701c664cd26a25a93df9e3c02 369 PANTHER PTHR35457 260 369 2.9E-56 T 23-04-2016 RBRH_RS11185 845acb6701c664cd26a25a93df9e3c02 369 PANTHER PTHR35457 87 237 2.9E-56 T 23-04-2016 RBRH_RS11185 845acb6701c664cd26a25a93df9e3c02 369 PANTHER PTHR35457 4 71 2.9E-56 T 23-04-2016 RBRH_RS11610 0386bfecd1d85cf6b9663134923ab419 281 Gene3D G3DSA:3.40.190.10 217 253 2.0E-6 T 23-04-2016 RBRH_RS11610 0386bfecd1d85cf6b9663134923ab419 281 Gene3D G3DSA:3.40.190.10 35 108 2.0E-6 T 23-04-2016 RBRH_RS11610 0386bfecd1d85cf6b9663134923ab419 281 PANTHER PTHR30632 6 262 7.3E-43 T 23-04-2016 RBRH_RS11610 0386bfecd1d85cf6b9663134923ab419 281 Pfam PF13531 Bacterial extracellular solute-binding protein 18 255 1.8E-37 T 23-04-2016 RBRH_RS11610 0386bfecd1d85cf6b9663134923ab419 281 SUPERFAMILY SSF53850 16 257 1.84E-29 T 23-04-2016 RBRH_RS11610 0386bfecd1d85cf6b9663134923ab419 281 Gene3D G3DSA:3.40.190.10 109 216 2.5E-27 T 23-04-2016 RBRH_RS11610 0386bfecd1d85cf6b9663134923ab419 281 PANTHER PTHR30632:SF0 6 262 7.3E-43 T 23-04-2016 RBRH_RS08065 5d63acae9a17ba81d9d59b685e681653 409 PANTHER PTHR13096 29 239 1.1E-37 T 23-04-2016 RBRH_RS08065 5d63acae9a17ba81d9d59b685e681653 409 SMART SM00558 122 244 0.0014 T 23-04-2016 IPR003347 JmjC domain RBRH_RS08065 5d63acae9a17ba81d9d59b685e681653 409 Gene3D G3DSA:2.60.120.650 28 234 5.1E-41 T 23-04-2016 RBRH_RS08065 5d63acae9a17ba81d9d59b685e681653 409 Pfam PF08007 Cupin superfamily protein 35 340 8.2E-87 T 23-04-2016 IPR003347 JmjC domain RBRH_RS08065 5d63acae9a17ba81d9d59b685e681653 409 SUPERFAMILY SSF51197 26 319 8.51E-71 T 23-04-2016 RBRH_RS10310 8f862fbfd2c0b5ff3ef18e99faf00127 81 Gene3D G3DSA:2.10.260.10 1 44 1.9E-14 T 23-04-2016 RBRH_RS10310 8f862fbfd2c0b5ff3ef18e99faf00127 81 SMART SM00966 6 50 2.7E-6 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 RBRH_RS10310 8f862fbfd2c0b5ff3ef18e99faf00127 81 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 34 3.4E-8 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 RBRH_RS10310 8f862fbfd2c0b5ff3ef18e99faf00127 81 SUPERFAMILY SSF89447 1 56 1.62E-11 T 23-04-2016 RBRH_RS03395 29543bec81697e7623b44fecbdf08ca2 156 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 5 132 8.4E-28 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RBRH_RS03395 29543bec81697e7623b44fecbdf08ca2 156 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 7 133 25.275 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RBRH_RS03395 29543bec81697e7623b44fecbdf08ca2 156 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 6 131 1.3E-20 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RBRH_RS03395 29543bec81697e7623b44fecbdf08ca2 156 Gene3D G3DSA:3.90.470.20 6 132 1.8E-33 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RBRH_RS03395 29543bec81697e7623b44fecbdf08ca2 156 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 12 107 1.0E-38 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RBRH_RS03395 29543bec81697e7623b44fecbdf08ca2 156 SUPERFAMILY SSF56214 6 132 1.96E-25 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RBRH_RS03395 29543bec81697e7623b44fecbdf08ca2 156 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 8 128 2.8E-17 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RBRH_RS05755 44646faa2d7a41b67ca26ba2dd3fad1c 301 Gene3D G3DSA:3.10.350.10 70 115 4.0E-14 T 23-04-2016 IPR018392 LysM domain RBRH_RS05755 44646faa2d7a41b67ca26ba2dd3fad1c 301 Pfam PF01476 LysM domain 72 114 1.1E-9 T 23-04-2016 IPR018392 LysM domain RBRH_RS05755 44646faa2d7a41b67ca26ba2dd3fad1c 301 Pfam PF01551 Peptidase family M23 200 294 8.3E-29 T 23-04-2016 IPR016047 Peptidase M23 RBRH_RS05755 44646faa2d7a41b67ca26ba2dd3fad1c 301 Gene3D G3DSA:2.70.70.10 169 299 2.7E-38 T 23-04-2016 RBRH_RS05755 44646faa2d7a41b67ca26ba2dd3fad1c 301 SUPERFAMILY SSF51261 72 298 2.04E-46 T 23-04-2016 IPR011055 Duplicated hybrid motif RBRH_RS05755 44646faa2d7a41b67ca26ba2dd3fad1c 301 SMART SM00257 71 115 7.5E-8 T 23-04-2016 IPR018392 LysM domain RBRH_RS05755 44646faa2d7a41b67ca26ba2dd3fad1c 301 PANTHER PTHR21666 184 301 1.5E-39 T 23-04-2016 RBRH_RS05935 1d0c739bdd56436ca05fd82b69410282 401 SUPERFAMILY SSF53383 36 397 3.85E-85 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS05935 1d0c739bdd56436ca05fd82b69410282 401 Gene3D G3DSA:3.90.1150.10 267 397 6.2E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS05935 1d0c739bdd56436ca05fd82b69410282 401 Gene3D G3DSA:3.40.640.10 16 264 1.2E-67 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS05935 1d0c739bdd56436ca05fd82b69410282 401 PANTHER PTHR11808:SF45 40 401 4.6E-127 T 23-04-2016 RBRH_RS05935 1d0c739bdd56436ca05fd82b69410282 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 31 397 1.7E-120 T 23-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 RBRH_RS05935 1d0c739bdd56436ca05fd82b69410282 401 PANTHER PTHR11808 40 401 4.6E-127 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RBRH_RS05935 1d0c739bdd56436ca05fd82b69410282 401 PIRSF PIRSF001434 7 399 1.2E-107 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RBRH_RS05935 1d0c739bdd56436ca05fd82b69410282 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 396 5.5E-84 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RBRH_RS00350 cd4f3ccd2a1fe8bd5ee1a793d8bd6b06 475 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 8 473 1.7E-81 T 23-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 RBRH_RS00350 cd4f3ccd2a1fe8bd5ee1a793d8bd6b06 475 Pfam PF12693 GspL periplasmic domain 326 473 2.2E-23 T 23-04-2016 IPR025691 GspL periplasmic domain RBRH_RS00350 cd4f3ccd2a1fe8bd5ee1a793d8bd6b06 475 Pfam PF05134 Type II secretion system (T2SS), protein L 16 318 2.3E-34 T 23-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain RBRH_RS00350 cd4f3ccd2a1fe8bd5ee1a793d8bd6b06 475 SUPERFAMILY SSF53067 3 146 6.73E-23 T 23-04-2016 RBRH_RS03445 279ed33b0f71aa491ec2043ec3682a1d 153 PANTHER PTHR23091 8 153 8.6E-28 T 23-04-2016 RBRH_RS03445 279ed33b0f71aa491ec2043ec3682a1d 153 Pfam PF13673 Acetyltransferase (GNAT) domain 76 152 7.2E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RBRH_RS03445 279ed33b0f71aa491ec2043ec3682a1d 153 SUPERFAMILY SSF55729 1 153 2.84E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS03445 279ed33b0f71aa491ec2043ec3682a1d 153 Gene3D G3DSA:3.40.630.30 2 152 7.4E-43 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS03445 279ed33b0f71aa491ec2043ec3682a1d 153 PANTHER PTHR23091:SF275 8 153 8.6E-28 T 23-04-2016 RBRH_RS10725 c317c656bb51f18071c8cd0d2d1c754c 103 Gene3D G3DSA:3.60.20.10 3 46 5.8E-5 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS10725 c317c656bb51f18071c8cd0d2d1c754c 103 Pfam PF13230 Glutamine amidotransferases class-II 1 50 6.4E-17 T 23-04-2016 IPR026869 Putative glutamine amidotransferase type 2 RBRH_RS07900 fa977211ed85afb8ecaf5cd3b509cbe1 244 PANTHER PTHR30625 20 241 3.2E-46 T 23-04-2016 RBRH_RS07900 fa977211ed85afb8ecaf5cd3b509cbe1 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 107 210 1.8E-34 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RBRH_RS07900 fa977211ed85afb8ecaf5cd3b509cbe1 244 PANTHER PTHR30625:SF3 20 241 3.2E-46 T 23-04-2016 RBRH_RS12065 309185d351b85f1620e7eeb732b2f408 490 Pfam PF08388 Group II intron, maturase-specific domain 351 429 1.9E-25 T 23-04-2016 IPR013597 Group II intron, maturase-specific RBRH_RS12065 309185d351b85f1620e7eeb732b2f408 490 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 69 416 1.1E-105 T 23-04-2016 IPR030931 Group II intron reverse transcriptase/maturase RBRH_RS12065 309185d351b85f1620e7eeb732b2f408 490 Pfam PF13655 N-terminal domain of reverse transcriptase 24 105 9.1E-33 T 23-04-2016 IPR025960 Reverse transcriptase, N-terminal domain RBRH_RS12065 309185d351b85f1620e7eeb732b2f408 490 PANTHER PTHR19446:SF383 110 367 8.9E-62 T 23-04-2016 RBRH_RS12065 309185d351b85f1620e7eeb732b2f408 490 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 120 334 1.4E-37 T 23-04-2016 IPR000477 Reverse transcriptase domain RBRH_RS12065 309185d351b85f1620e7eeb732b2f408 490 SUPERFAMILY SSF56672 85 423 7.23E-45 T 23-04-2016 RBRH_RS12065 309185d351b85f1620e7eeb732b2f408 490 PANTHER PTHR19446 110 367 8.9E-62 T 23-04-2016 RBRH_RS01825 cc4533381e491394f241306c0cae7ec8 488 SUPERFAMILY SSF111283 31 487 1.7E-132 T 23-04-2016 RBRH_RS01825 cc4533381e491394f241306c0cae7ec8 488 PANTHER PTHR30624:SF4 20 487 3.5E-217 T 23-04-2016 RBRH_RS01825 cc4533381e491394f241306c0cae7ec8 488 PANTHER PTHR30624 20 487 3.5E-217 T 23-04-2016 RBRH_RS01825 cc4533381e491394f241306c0cae7ec8 488 PIRSF PIRSF004919 23 488 2.4E-137 T 23-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS01825 cc4533381e491394f241306c0cae7ec8 488 Pfam PF01523 Putative modulator of DNA gyrase 43 339 1.3E-68 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS10950 a3f72910931e01c98a723cf670b1e32a 391 PANTHER PTHR23510 5 391 4.7E-110 T 23-04-2016 RBRH_RS10950 a3f72910931e01c98a723cf670b1e32a 391 Gene3D G3DSA:1.20.1250.20 10 185 2.4E-28 T 23-04-2016 RBRH_RS10950 a3f72910931e01c98a723cf670b1e32a 391 Gene3D G3DSA:1.20.1250.20 202 383 1.5E-18 T 23-04-2016 RBRH_RS10950 a3f72910931e01c98a723cf670b1e32a 391 PRINTS PR01035 Tetracycline resistance protein signature 18 34 2.3E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RBRH_RS10950 a3f72910931e01c98a723cf670b1e32a 391 PRINTS PR01035 Tetracycline resistance protein signature 137 159 2.3E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RBRH_RS10950 a3f72910931e01c98a723cf670b1e32a 391 PRINTS PR01035 Tetracycline resistance protein signature 46 65 2.3E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RBRH_RS10950 a3f72910931e01c98a723cf670b1e32a 391 PRINTS PR01035 Tetracycline resistance protein signature 268 289 2.3E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RBRH_RS10950 a3f72910931e01c98a723cf670b1e32a 391 PANTHER PTHR23510:SF6 5 391 4.7E-110 T 23-04-2016 RBRH_RS10950 a3f72910931e01c98a723cf670b1e32a 391 Pfam PF07690 Major Facilitator Superfamily 13 341 1.4E-36 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS10950 a3f72910931e01c98a723cf670b1e32a 391 SUPERFAMILY SSF103473 7 381 1.57E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS09930 0feebf18a70c75d917594fd902d2a97c 558 SUPERFAMILY SSF53448 113 348 4.22E-22 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS09930 0feebf18a70c75d917594fd902d2a97c 558 Gene3D G3DSA:3.90.550.10 114 352 4.2E-12 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS09930 0feebf18a70c75d917594fd902d2a97c 558 Pfam PF13641 Glycosyltransferase like family 2 114 345 4.7E-16 T 23-04-2016 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 SUPERFAMILY SSF55021 257 334 5.02E-18 T 23-04-2016 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 Pfam PF01842 ACT domain 277 331 2.2E-10 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 413 3.5E-126 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 412 6.4E-129 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 PIRSF PIRSF000726 54 416 6.0E-140 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 SUPERFAMILY SSF55021 342 414 4.58E-25 T 23-04-2016 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 Pfam PF00696 Amino acid kinase family 3 229 1.6E-49 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 Pfam PF13840 ACT domain 349 409 2.6E-17 T 23-04-2016 IPR027795 GATS-like ACT domain RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 PANTHER PTHR21499 1 415 2.6E-159 T 23-04-2016 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 SUPERFAMILY SSF53633 4 250 2.23E-72 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 Gene3D G3DSA:3.40.1160.10 1 254 2.2E-72 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RBRH_RS07975 044fe5106a2b75c4003bc67c878215a9 416 PANTHER PTHR21499:SF27 1 415 2.6E-159 T 23-04-2016 RBRH_RS00490 cf72faabd77594ed118de14bcb303e43 236 PANTHER PTHR31760:SF0 7 232 1.4E-64 T 23-04-2016 RBRH_RS00490 cf72faabd77594ed118de14bcb303e43 236 Pfam PF02527 rRNA small subunit methyltransferase G 46 229 1.2E-45 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RBRH_RS00490 cf72faabd77594ed118de14bcb303e43 236 PANTHER PTHR31760 7 232 1.4E-64 T 23-04-2016 RBRH_RS00490 cf72faabd77594ed118de14bcb303e43 236 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 47 231 2.6E-43 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RBRH_RS00490 cf72faabd77594ed118de14bcb303e43 236 SUPERFAMILY SSF53335 32 231 5.78E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS00490 cf72faabd77594ed118de14bcb303e43 236 Gene3D G3DSA:3.40.50.150 27 231 3.2E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS00490 cf72faabd77594ed118de14bcb303e43 236 PIRSF PIRSF003078 22 236 7.4E-48 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RBRH_RS00490 cf72faabd77594ed118de14bcb303e43 236 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 35 230 25.422 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RBRH_RS05355 18c2a0007c805a0f4c141c861570a79d 370 PRINTS PR00184 Neisseria sp. porin signature 61 86 1.8E-12 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS05355 18c2a0007c805a0f4c141c861570a79d 370 PRINTS PR00184 Neisseria sp. porin signature 158 175 1.8E-12 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS05355 18c2a0007c805a0f4c141c861570a79d 370 PRINTS PR00184 Neisseria sp. porin signature 188 205 1.8E-12 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS05355 18c2a0007c805a0f4c141c861570a79d 370 PRINTS PR00184 Neisseria sp. porin signature 314 338 1.8E-12 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS05355 18c2a0007c805a0f4c141c861570a79d 370 Gene3D G3DSA:2.40.160.10 29 370 1.1E-84 T 23-04-2016 IPR023614 Porin domain RBRH_RS05355 18c2a0007c805a0f4c141c861570a79d 370 SUPERFAMILY SSF56935 29 370 2.04E-74 T 23-04-2016 RBRH_RS05355 18c2a0007c805a0f4c141c861570a79d 370 Pfam PF13609 Gram-negative porin 18 340 1.7E-43 T 23-04-2016 RBRH_RS01735 dab3d79ba3d71451193d82e44f495cf7 68 SUPERFAMILY SSF101874 1 68 3.14E-10 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RBRH_RS01735 dab3d79ba3d71451193d82e44f495cf7 68 Gene3D G3DSA:2.40.128.110 1 68 6.5E-11 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RBRH_RS01735 dab3d79ba3d71451193d82e44f495cf7 68 Pfam PF04264 YceI-like domain 1 63 1.3E-5 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RBRH_RS11670 d00ed102b7ea3f282a135be99795075e 294 Gene3D G3DSA:3.30.950.10 125 238 9.1E-37 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RBRH_RS11670 d00ed102b7ea3f282a135be99795075e 294 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 94 105 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS11670 d00ed102b7ea3f282a135be99795075e 294 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 16 237 35.877 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS11670 d00ed102b7ea3f282a135be99795075e 294 PANTHER PTHR21091:SF18 15 236 6.2E-74 T 23-04-2016 RBRH_RS11670 d00ed102b7ea3f282a135be99795075e 294 Gene3D G3DSA:3.40.1010.10 17 124 3.6E-14 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RBRH_RS11670 d00ed102b7ea3f282a135be99795075e 294 SUPERFAMILY SSF53790 15 235 2.88E-73 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RBRH_RS11670 d00ed102b7ea3f282a135be99795075e 294 PANTHER PTHR21091 15 236 6.2E-74 T 23-04-2016 RBRH_RS11670 d00ed102b7ea3f282a135be99795075e 294 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 17 285 4.5E-70 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS11670 d00ed102b7ea3f282a135be99795075e 294 PIRSF PIRSF005917 7 290 6.8E-95 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RBRH_RS11670 d00ed102b7ea3f282a135be99795075e 294 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 214 3.6E-27 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RBRH_RS06360 24ca0991d5d80ccbd35a14fe897ba471 159 SUPERFAMILY SSF52833 3 159 6.67E-64 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS06360 24ca0991d5d80ccbd35a14fe897ba471 159 Pfam PF00255 Glutathione peroxidase 4 110 9.1E-44 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RBRH_RS06360 24ca0991d5d80ccbd35a14fe897ba471 159 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 23-04-2016 IPR029759 Glutathione peroxidase active site RBRH_RS06360 24ca0991d5d80ccbd35a14fe897ba471 159 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 23-04-2016 IPR029760 Glutathione peroxidase conserved site RBRH_RS06360 24ca0991d5d80ccbd35a14fe897ba471 159 PRINTS PR01011 Glutathione peroxidase family signature 57 73 4.0E-22 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RBRH_RS06360 24ca0991d5d80ccbd35a14fe897ba471 159 PRINTS PR01011 Glutathione peroxidase family signature 22 39 4.0E-22 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RBRH_RS06360 24ca0991d5d80ccbd35a14fe897ba471 159 PRINTS PR01011 Glutathione peroxidase family signature 123 132 4.0E-22 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RBRH_RS06360 24ca0991d5d80ccbd35a14fe897ba471 159 PANTHER PTHR11592 1 159 6.8E-95 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RBRH_RS06360 24ca0991d5d80ccbd35a14fe897ba471 159 PIRSF PIRSF000303 1 159 2.9E-69 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RBRH_RS06360 24ca0991d5d80ccbd35a14fe897ba471 159 Gene3D G3DSA:3.40.30.10 3 159 4.0E-74 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 Gene3D G3DSA:2.40.160.10 21 367 2.5E-113 T 23-04-2016 IPR023614 Porin domain RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 SUPERFAMILY SSF56935 21 367 1.49E-97 T 23-04-2016 RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 1.3E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 157 168 1.3E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 311 328 1.3E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.3E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 236 248 1.3E-7 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 Pfam PF13609 Gram-negative porin 8 333 1.5E-60 T 23-04-2016 RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 PRINTS PR00184 Neisseria sp. porin signature 53 78 1.9E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 PRINTS PR00184 Neisseria sp. porin signature 308 332 1.9E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS02775 27de87a9814655e39e56f0179d99ef64 367 PRINTS PR00184 Neisseria sp. porin signature 268 294 1.9E-5 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS00625 04cfcd0d5b0ef55c6aa80e74c22f3712 206 PANTHER PTHR40942:SF1 79 206 3.0E-24 T 23-04-2016 RBRH_RS00625 04cfcd0d5b0ef55c6aa80e74c22f3712 206 Gene3D G3DSA:1.10.760.10 128 203 6.9E-32 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS00625 04cfcd0d5b0ef55c6aa80e74c22f3712 206 PANTHER PTHR40942 79 206 3.0E-24 T 23-04-2016 RBRH_RS00625 04cfcd0d5b0ef55c6aa80e74c22f3712 206 PRINTS PR00607 Class IE cytochrome C signature 149 159 2.9E-14 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RBRH_RS00625 04cfcd0d5b0ef55c6aa80e74c22f3712 206 PRINTS PR00607 Class IE cytochrome C signature 191 202 2.9E-14 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RBRH_RS00625 04cfcd0d5b0ef55c6aa80e74c22f3712 206 PRINTS PR00607 Class IE cytochrome C signature 177 189 2.9E-14 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RBRH_RS00625 04cfcd0d5b0ef55c6aa80e74c22f3712 206 PRINTS PR00607 Class IE cytochrome C signature 138 149 2.9E-14 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RBRH_RS00625 04cfcd0d5b0ef55c6aa80e74c22f3712 206 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 127 201 9.4E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS00625 04cfcd0d5b0ef55c6aa80e74c22f3712 206 SUPERFAMILY SSF46626 128 203 3.44E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS10080 454129c34e2a0f69e49a8e521391c24a 109 Gene3D G3DSA:3.30.420.40 31 81 1.1E-6 T 23-04-2016 RBRH_RS10080 454129c34e2a0f69e49a8e521391c24a 109 SUPERFAMILY SSF53067 30 90 1.36E-6 T 23-04-2016 RBRH_RS04640 62c143ed0ae6f1cfbc3f721c5b6e4eec 241 SUPERFAMILY SSF56925 25 241 1.23E-18 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RBRH_RS04640 62c143ed0ae6f1cfbc3f721c5b6e4eec 241 Pfam PF03922 OmpW family 25 241 4.3E-27 T 23-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RBRH_RS04640 62c143ed0ae6f1cfbc3f721c5b6e4eec 241 PANTHER PTHR36920 20 241 8.9E-26 T 23-04-2016 RBRH_RS04640 62c143ed0ae6f1cfbc3f721c5b6e4eec 241 PANTHER PTHR36920:SF1 20 241 8.9E-26 T 23-04-2016 RBRH_RS04640 62c143ed0ae6f1cfbc3f721c5b6e4eec 241 Gene3D G3DSA:2.40.160.20 24 241 6.0E-58 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 PANTHER PTHR11773 490 1000 0.0 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 PANTHER PTHR11773 4 470 0.0 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 Gene3D G3DSA:3.40.640.10 536 819 5.6E-42 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 Gene3D G3DSA:3.40.640.10 100 326 3.4E-15 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 SUPERFAMILY SSF53383 508 929 1.95E-98 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 SUPERFAMILY SSF53383 972 994 1.95E-98 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 30 993 0.0 T 23-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 21 999 25.935 T 23-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 SUPERFAMILY SSF53383 30 456 1.07E-100 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 PANTHER PTHR11773:SF1 490 1000 0.0 T 23-04-2016 RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 PANTHER PTHR11773:SF1 4 470 0.0 T 23-04-2016 RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 Pfam PF02347 Glycine cleavage system P-protein 29 455 1.0E-179 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RBRH_RS00605 8f786fc2ccd09f37f771c0fd02e444da 1000 Pfam PF02347 Glycine cleavage system P-protein 481 776 1.1E-14 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RBRH_RS05395 13680a94df05b05f6d05ea4c04e94496 332 SUPERFAMILY SSF48179 199 319 1.19E-29 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RBRH_RS05395 13680a94df05b05f6d05ea4c04e94496 332 Gene3D G3DSA:3.40.50.720 2 195 4.3E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS05395 13680a94df05b05f6d05ea4c04e94496 332 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 199 319 2.3E-27 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RBRH_RS05395 13680a94df05b05f6d05ea4c04e94496 332 Gene3D G3DSA:1.10.1040.10 199 320 6.2E-30 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RBRH_RS05395 13680a94df05b05f6d05ea4c04e94496 332 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 106 7.1E-22 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RBRH_RS05395 13680a94df05b05f6d05ea4c04e94496 332 PANTHER PTHR21708:SF29 139 321 4.2E-78 T 23-04-2016 RBRH_RS05395 13680a94df05b05f6d05ea4c04e94496 332 PANTHER PTHR21708:SF29 1 123 4.2E-78 T 23-04-2016 RBRH_RS05395 13680a94df05b05f6d05ea4c04e94496 332 SUPERFAMILY SSF51735 2 109 5.25E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS05395 13680a94df05b05f6d05ea4c04e94496 332 PANTHER PTHR21708 139 321 4.2E-78 T 23-04-2016 RBRH_RS05395 13680a94df05b05f6d05ea4c04e94496 332 PANTHER PTHR21708 1 123 4.2E-78 T 23-04-2016 RBRH_RS06520 82d842926fb4545acce72666b54aaf24 272 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 3 271 75.339 T 23-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein RBRH_RS06520 82d842926fb4545acce72666b54aaf24 272 Pfam PF03618 Kinase/pyrophosphorylase 6 262 6.4E-83 T 23-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 RBRH_RS06520 82d842926fb4545acce72666b54aaf24 272 PANTHER PTHR31756:SF3 1 272 4.7E-95 T 23-04-2016 RBRH_RS06520 82d842926fb4545acce72666b54aaf24 272 PANTHER PTHR31756 1 272 4.7E-95 T 23-04-2016 RBRH_RS11575 c2a799d5ffd2e9dccfafa6434b76b31d 337 PANTHER PTHR18640:SF9 6 322 5.7E-101 T 23-04-2016 RBRH_RS11575 c2a799d5ffd2e9dccfafa6434b76b31d 337 PANTHER PTHR18640 6 322 5.7E-101 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter RBRH_RS11575 c2a799d5ffd2e9dccfafa6434b76b31d 337 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 9 316 6.8E-101 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter RBRH_RS11575 c2a799d5ffd2e9dccfafa6434b76b31d 337 PIRSF PIRSF026166 1 332 8.5E-136 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter RBRH_RS06050 f3d69e58e94f71f249b7b36d6a95fe22 123 PANTHER PTHR30561:SF9 49 123 1.8E-17 T 23-04-2016 RBRH_RS06050 f3d69e58e94f71f249b7b36d6a95fe22 123 PANTHER PTHR30561 49 123 1.8E-17 T 23-04-2016 RBRH_RS06050 f3d69e58e94f71f249b7b36d6a95fe22 123 Pfam PF00893 Small Multidrug Resistance protein 34 113 1.4E-9 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 RBRH_RS06050 f3d69e58e94f71f249b7b36d6a95fe22 123 SUPERFAMILY SSF103481 33 122 1.44E-13 T 23-04-2016 RBRH_RS04460 06161f7b5abfbf04185905412db59b7c 101 Gene3D G3DSA:4.10.830.10 41 101 1.8E-28 T 23-04-2016 RBRH_RS04460 06161f7b5abfbf04185905412db59b7c 101 SUPERFAMILY SSF57716 2 101 6.56E-37 T 23-04-2016 RBRH_RS04460 06161f7b5abfbf04185905412db59b7c 101 PANTHER PTHR19836 2 101 1.8E-52 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04460 06161f7b5abfbf04185905412db59b7c 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.283 T 23-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid RBRH_RS04460 06161f7b5abfbf04185905412db59b7c 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.8E-24 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02540 1691230a146a0c6b01b797634a7679f4 61 Pfam PF11943 Protein of unknown function (DUF3460) 1 59 1.4E-29 T 23-04-2016 IPR021853 Protein of unknown function DUF3460 RBRH_RS09735 1c1ffca6d7b50dbac9e2e77684fd6f14 403 Gene3D G3DSA:3.40.640.10 54 281 2.3E-73 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS09735 1c1ffca6d7b50dbac9e2e77684fd6f14 403 SUPERFAMILY SSF53383 13 400 5.92E-107 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS09735 1c1ffca6d7b50dbac9e2e77684fd6f14 403 Gene3D G3DSA:3.90.1150.10 282 398 9.3E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS09735 1c1ffca6d7b50dbac9e2e77684fd6f14 403 Pfam PF00155 Aminotransferase class I and II 41 396 1.4E-59 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RBRH_RS09735 1c1ffca6d7b50dbac9e2e77684fd6f14 403 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 242 255 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RBRH_RS09735 1c1ffca6d7b50dbac9e2e77684fd6f14 403 PANTHER PTHR11751:SF401 16 396 2.2E-139 T 23-04-2016 RBRH_RS09735 1c1ffca6d7b50dbac9e2e77684fd6f14 403 PANTHER PTHR11751 16 396 2.2E-139 T 23-04-2016 RBRH_RS11600 169351eaa832a173701c8e6c021ed8cb 252 Pfam PF01927 Mut7-C RNAse domain 94 235 4.1E-49 T 23-04-2016 IPR002782 Mut7-C RNAse domain RBRH_RS11600 169351eaa832a173701c8e6c021ed8cb 252 Gene3D G3DSA:3.10.20.30 31 76 5.0E-6 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS11600 169351eaa832a173701c8e6c021ed8cb 252 PANTHER PTHR39081 78 244 7.7E-21 T 23-04-2016 RBRH_RS11600 169351eaa832a173701c8e6c021ed8cb 252 SUPERFAMILY SSF54285 9 76 2.99E-6 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RBRH_RS11600 169351eaa832a173701c8e6c021ed8cb 252 Pfam PF14451 Mut7-C ubiquitin 1 79 6.6E-31 T 23-04-2016 IPR027798 Ubiquitin Mut7-C domain RBRH_RS10775 115abbc7fc27bf13c47eca4b21fc9886 157 TIGRFAM TIGR02664 nitr_red_assoc: conserved hypothetical protein 9 154 1.7E-44 T 23-04-2016 IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated RBRH_RS10775 115abbc7fc27bf13c47eca4b21fc9886 157 Pfam PF09655 Conserved nitrate reductase-associated protein (Nitr_red_assoc) 10 154 2.9E-45 T 23-04-2016 IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated RBRH_RS11895 565212a41bd77ad1fb405799e1b8bd29 292 PANTHER PTHR31689:SF0 1 290 2.1E-117 T 23-04-2016 RBRH_RS11895 565212a41bd77ad1fb405799e1b8bd29 292 Pfam PF01678 Diaminopimelate epimerase 161 278 3.8E-28 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS11895 565212a41bd77ad1fb405799e1b8bd29 292 Pfam PF01678 Diaminopimelate epimerase 5 125 2.6E-30 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS11895 565212a41bd77ad1fb405799e1b8bd29 292 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 284 4.2E-83 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS11895 565212a41bd77ad1fb405799e1b8bd29 292 Gene3D G3DSA:3.10.310.10 121 264 5.6E-47 T 23-04-2016 RBRH_RS11895 565212a41bd77ad1fb405799e1b8bd29 292 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 286 37.42 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS11895 565212a41bd77ad1fb405799e1b8bd29 292 SUPERFAMILY SSF54506 3 286 3.04E-49 T 23-04-2016 RBRH_RS11895 565212a41bd77ad1fb405799e1b8bd29 292 Gene3D G3DSA:3.10.310.10 1 120 7.0E-54 T 23-04-2016 RBRH_RS11895 565212a41bd77ad1fb405799e1b8bd29 292 PANTHER PTHR31689 1 290 2.1E-117 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS02855 7d6ab680d384195f262c21258c6bd57c 330 PANTHER PTHR11922:SF18 136 305 1.6E-46 T 23-04-2016 RBRH_RS02855 7d6ab680d384195f262c21258c6bd57c 330 Gene3D G3DSA:3.40.50.880 78 326 4.1E-41 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS02855 7d6ab680d384195f262c21258c6bd57c 330 Pfam PF07722 Peptidase C26 97 302 2.4E-52 T 23-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 RBRH_RS02855 7d6ab680d384195f262c21258c6bd57c 330 SUPERFAMILY SSF52317 123 328 1.06E-37 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like RBRH_RS02855 7d6ab680d384195f262c21258c6bd57c 330 PANTHER PTHR11922 136 305 1.6E-46 T 23-04-2016 RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 SUPERFAMILY SSF52540 302 529 1.07E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 PANTHER PTHR19211:SF7 1 555 0.0 T 23-04-2016 RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 4.9E-292 T 23-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 Pfam PF00005 ABC transporter 340 473 3.2E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 Pfam PF00005 ABC transporter 22 191 7.9E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 Gene3D G3DSA:3.40.50.300 12 105 7.7E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 Gene3D G3DSA:3.40.50.300 141 288 7.7E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 Gene3D G3DSA:3.40.50.300 321 536 2.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 SMART SM00382 348 526 5.9E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 SMART SM00382 31 236 9.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 Pfam PF12848 ABC transporter 230 307 1.2E-13 T 23-04-2016 IPR032781 ABC-transporter extension domain RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 SUPERFAMILY SSF52540 12 236 5.7E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05000 847f224d6a553dc7d4967243accb93b0 555 PANTHER PTHR19211 1 555 0.0 T 23-04-2016 RBRH_RS07055 c56194878479c5beda02cde892878fa1 102 PANTHER PTHR12735 17 97 3.0E-28 T 23-04-2016 RBRH_RS07055 c56194878479c5beda02cde892878fa1 102 Pfam PF01722 BolA-like protein 22 96 5.6E-29 T 23-04-2016 IPR002634 BolA protein RBRH_RS07055 c56194878479c5beda02cde892878fa1 102 PIRSF PIRSF003113 2 102 4.9E-27 T 23-04-2016 IPR002634 BolA protein RBRH_RS07055 c56194878479c5beda02cde892878fa1 102 PANTHER PTHR12735:SF24 17 97 3.0E-28 T 23-04-2016 RBRH_RS07055 c56194878479c5beda02cde892878fa1 102 Gene3D G3DSA:3.30.70.1500 16 93 8.8E-27 T 23-04-2016 RBRH_RS07055 c56194878479c5beda02cde892878fa1 102 SUPERFAMILY SSF82657 12 98 1.44E-26 T 23-04-2016 IPR002634 BolA protein RBRH_RS05890 2d7afe70d591ffd7dc48e9e04a777b70 373 PANTHER PTHR11079 31 346 8.5E-119 T 23-04-2016 RBRH_RS05890 2d7afe70d591ffd7dc48e9e04a777b70 373 SUPERFAMILY SSF55174 40 88 4.04E-8 T 23-04-2016 RBRH_RS05890 2d7afe70d591ffd7dc48e9e04a777b70 373 PANTHER PTHR11079:SF73 31 346 8.5E-119 T 23-04-2016 RBRH_RS05890 2d7afe70d591ffd7dc48e9e04a777b70 373 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 38 334 3.3E-84 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS05890 2d7afe70d591ffd7dc48e9e04a777b70 373 SMART SM00363 40 98 0.0018 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS05890 2d7afe70d591ffd7dc48e9e04a777b70 373 SUPERFAMILY SSF55120 100 336 2.67E-71 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS05890 2d7afe70d591ffd7dc48e9e04a777b70 373 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 157 171 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS05890 2d7afe70d591ffd7dc48e9e04a777b70 373 Gene3D G3DSA:3.10.290.10 39 86 4.0E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS05890 2d7afe70d591ffd7dc48e9e04a777b70 373 Pfam PF00849 RNA pseudouridylate synthase 115 270 3.4E-30 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS05890 2d7afe70d591ffd7dc48e9e04a777b70 373 Pfam PF01479 S4 domain 40 78 2.6E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS10035 d8a2b72b5e583cefe628b5f5d5286fa3 304 PANTHER PTHR12544 1 304 4.5E-129 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 RBRH_RS10035 d8a2b72b5e583cefe628b5f5d5286fa3 304 Pfam PF04960 Glutaminase 21 304 7.6E-112 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 RBRH_RS10035 d8a2b72b5e583cefe628b5f5d5286fa3 304 Hamap MF_00313 Glutaminase [glsA]. 3 304 46.142 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 RBRH_RS10035 d8a2b72b5e583cefe628b5f5d5286fa3 304 SUPERFAMILY SSF56601 2 304 1.84E-111 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS10035 d8a2b72b5e583cefe628b5f5d5286fa3 304 TIGRFAM TIGR03814 Gln_ase: glutaminase A 7 304 1.8E-124 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 RBRH_RS10035 d8a2b72b5e583cefe628b5f5d5286fa3 304 Gene3D G3DSA:3.40.710.10 2 304 3.8E-121 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RBRH_RS10245 bc31c327a0d77e99c6e1cf37b1a5acb3 617 Gene3D G3DSA:3.30.2010.10 180 263 6.6E-16 T 23-04-2016 RBRH_RS10245 bc31c327a0d77e99c6e1cf37b1a5acb3 617 PANTHER PTHR22726 139 468 2.0E-56 T 23-04-2016 RBRH_RS10245 bc31c327a0d77e99c6e1cf37b1a5acb3 617 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 44 610 29.205 T 23-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 RBRH_RS10245 bc31c327a0d77e99c6e1cf37b1a5acb3 617 Gene3D G3DSA:1.25.40.10 479 583 6.7E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS10245 bc31c327a0d77e99c6e1cf37b1a5acb3 617 PANTHER PTHR22726:SF10 139 468 2.0E-56 T 23-04-2016 RBRH_RS10245 bc31c327a0d77e99c6e1cf37b1a5acb3 617 Pfam PF01435 Peptidase family M48 202 370 2.7E-29 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RBRH_RS10245 bc31c327a0d77e99c6e1cf37b1a5acb3 617 SUPERFAMILY SSF48452 421 448 6.64E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS10245 bc31c327a0d77e99c6e1cf37b1a5acb3 617 SUPERFAMILY SSF48452 484 553 6.64E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS11720 2444862f267d30a399fabc4db6985025 400 Gene3D G3DSA:1.20.1250.20 220 394 5.2E-11 T 23-04-2016 RBRH_RS11720 2444862f267d30a399fabc4db6985025 400 PANTHER PTHR23514 16 394 1.1E-95 T 23-04-2016 RBRH_RS11720 2444862f267d30a399fabc4db6985025 400 Gene3D G3DSA:1.20.1250.20 27 195 1.1E-13 T 23-04-2016 RBRH_RS11720 2444862f267d30a399fabc4db6985025 400 Pfam PF07690 Major Facilitator Superfamily 31 213 2.0E-10 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS11720 2444862f267d30a399fabc4db6985025 400 PANTHER PTHR23514:SF13 16 394 1.1E-95 T 23-04-2016 RBRH_RS11720 2444862f267d30a399fabc4db6985025 400 SUPERFAMILY SSF103473 14 396 2.35E-34 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS13500 e84ba17308a58e973be739611b0a5838 88 SUPERFAMILY SSF53223 3 85 4.09E-18 T 23-04-2016 RBRH_RS13500 e84ba17308a58e973be739611b0a5838 88 Gene3D G3DSA:3.40.192.10 2 87 3.8E-20 T 23-04-2016 RBRH_RS13500 e84ba17308a58e973be739611b0a5838 88 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 3 68 3.6E-14 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RBRH_RS13500 e84ba17308a58e973be739611b0a5838 88 PANTHER PTHR21089 1 88 2.9E-30 T 23-04-2016 RBRH_RS13500 e84ba17308a58e973be739611b0a5838 88 PANTHER PTHR21089:SF2 1 88 2.9E-30 T 23-04-2016 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 40.22 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 5.9E-100 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 Gene3D G3DSA:3.40.50.10490 22 98 8.2E-62 T 23-04-2016 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 Gene3D G3DSA:3.40.50.10490 157 243 8.2E-62 T 23-04-2016 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 PRINTS PR00395 Ribosomal protein S2 signature 5 23 2.3E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 PRINTS PR00395 Ribosomal protein S2 signature 174 185 2.3E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 PRINTS PR00395 Ribosomal protein S2 signature 36 45 2.3E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 PRINTS PR00395 Ribosomal protein S2 signature 157 174 2.3E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 PRINTS PR00395 Ribosomal protein S2 signature 86 103 2.3E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 PRINTS PR00395 Ribosomal protein S2 signature 195 209 2.3E-36 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 Gene3D G3DSA:1.10.287.610 99 151 4.7E-22 T 23-04-2016 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 SUPERFAMILY SSF52313 5 231 2.49E-91 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 Pfam PF00318 Ribosomal protein S2 8 223 5.2E-92 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 PANTHER PTHR12534 1 228 5.0E-105 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RBRH_RS06440 f3a088580c52a5d02fe92da1a0561674 248 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 223 241 6.1E-11 T 23-04-2016 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 6.1E-11 T 23-04-2016 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 6.1E-11 T 23-04-2016 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 Gene3D G3DSA:3.50.50.60 4 118 5.5E-16 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 391 2.8E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 SUPERFAMILY SSF51905 4 131 1.95E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 SUPERFAMILY SSF51905 211 240 1.95E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 SUPERFAMILY SSF51905 285 411 1.95E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 Gene3D G3DSA:3.50.50.60 221 396 2.9E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 Gene3D G3DSA:3.50.50.60 119 154 2.9E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 PANTHER PTHR22912 260 373 2.9E-16 T 23-04-2016 RBRH_RS04130 ed2db9bb2b7fcd290a5680d3c9f74275 486 PANTHER PTHR22912 224 243 2.9E-16 T 23-04-2016 RBRH_RS10390 8f064002eb07d98dabf40a8a876bfda8 169 Gene3D G3DSA:2.170.130.10 2 58 6.3E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RBRH_RS10390 8f064002eb07d98dabf40a8a876bfda8 169 Gene3D G3DSA:2.40.170.20 59 146 1.8E-12 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RBRH_RS10390 8f064002eb07d98dabf40a8a876bfda8 169 SUPERFAMILY SSF56935 2 153 6.23E-28 T 23-04-2016 RBRH_RS10390 8f064002eb07d98dabf40a8a876bfda8 169 PANTHER PTHR32552 1 148 2.7E-16 T 23-04-2016 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.4E-70 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 Gene3D G3DSA:2.40.50.140 1 123 1.1E-65 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 PIRSF PIRSF002133 1 124 3.2E-54 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 PANTHER PTHR11652 1 116 2.1E-73 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 SUPERFAMILY SSF50249 2 123 1.88E-51 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 Pfam PF00164 Ribosomal protein S12/S23 3 123 3.9E-43 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04370 677705fba56007e306856fcfd5c13797 126 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.659 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RBRH_RS09040 7d087dd59fc395e65d5538c9f6175ce9 162 PANTHER PTHR10849 2 162 3.2E-84 T 23-04-2016 RBRH_RS09040 7d087dd59fc395e65d5538c9f6175ce9 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 1.3E-44 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RBRH_RS09040 7d087dd59fc395e65d5538c9f6175ce9 162 PANTHER PTHR10849:SF20 2 162 3.2E-84 T 23-04-2016 RBRH_RS09040 7d087dd59fc395e65d5538c9f6175ce9 162 SUPERFAMILY SSF54862 36 144 1.63E-25 T 23-04-2016 RBRH_RS09040 7d087dd59fc395e65d5538c9f6175ce9 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS09040 7d087dd59fc395e65d5538c9f6175ce9 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS09040 7d087dd59fc395e65d5538c9f6175ce9 162 Gene3D G3DSA:1.10.1060.10 15 128 3.5E-21 T 23-04-2016 RBRH_RS09040 7d087dd59fc395e65d5538c9f6175ce9 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 27.771 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RBRH_RS09040 7d087dd59fc395e65d5538c9f6175ce9 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 2.3E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RBRH_RS11200 ac658b893c77bb05923d96050753399c 69 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 2.9E-25 T 23-04-2016 IPR021313 Protein of unknown function DUF2909 RBRH_RS00180 4bce721069f5f9e90c15e713103b02e9 188 Pfam PF00664 ABC transporter transmembrane region 28 176 2.9E-8 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS00180 4bce721069f5f9e90c15e713103b02e9 188 Gene3D G3DSA:1.20.1560.10 21 175 1.0E-13 T 23-04-2016 RBRH_RS00180 4bce721069f5f9e90c15e713103b02e9 188 SUPERFAMILY SSF90123 18 176 1.23E-16 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS03425 4f9dc2733bb70854dcb1d960921ae333 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RBRH_RS03425 4f9dc2733bb70854dcb1d960921ae333 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 3.5E-17 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RBRH_RS03425 4f9dc2733bb70854dcb1d960921ae333 195 PIRSF PIRSF000847 1 195 3.1E-43 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RBRH_RS03425 4f9dc2733bb70854dcb1d960921ae333 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 190 2.3E-51 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RBRH_RS03425 4f9dc2733bb70854dcb1d960921ae333 195 PANTHER PTHR14269:SF13 2 190 5.5E-65 T 23-04-2016 RBRH_RS03425 4f9dc2733bb70854dcb1d960921ae333 195 PANTHER PTHR14269 2 190 5.5E-65 T 23-04-2016 RBRH_RS03570 91605824c3e056b8f559051199363e27 574 PANTHER PTHR21666 76 466 4.2E-110 T 23-04-2016 RBRH_RS03570 91605824c3e056b8f559051199363e27 574 PANTHER PTHR21666:SF206 76 466 4.2E-110 T 23-04-2016 RBRH_RS03570 91605824c3e056b8f559051199363e27 574 Pfam PF01464 Transglycosylase SLT domain 125 226 5.0E-24 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RBRH_RS03570 91605824c3e056b8f559051199363e27 574 SUPERFAMILY SSF54106 424 468 5.1E-8 T 23-04-2016 IPR018392 LysM domain RBRH_RS03570 91605824c3e056b8f559051199363e27 574 Gene3D G3DSA:1.10.530.10 114 276 5.9E-46 T 23-04-2016 RBRH_RS03570 91605824c3e056b8f559051199363e27 574 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 139 167 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RBRH_RS03570 91605824c3e056b8f559051199363e27 574 Pfam PF01476 LysM domain 426 464 1.5E-5 T 23-04-2016 IPR018392 LysM domain RBRH_RS03570 91605824c3e056b8f559051199363e27 574 SUPERFAMILY SSF53955 118 278 1.15E-41 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS03570 91605824c3e056b8f559051199363e27 574 Gene3D G3DSA:3.10.350.10 426 467 4.8E-12 T 23-04-2016 IPR018392 LysM domain RBRH_RS03570 91605824c3e056b8f559051199363e27 574 Gene3D G3DSA:3.10.350.10 346 393 2.0E-5 T 23-04-2016 IPR018392 LysM domain RBRH_RS03570 91605824c3e056b8f559051199363e27 574 SMART SM00257 348 392 0.63 T 23-04-2016 IPR018392 LysM domain RBRH_RS03570 91605824c3e056b8f559051199363e27 574 SMART SM00257 424 467 7.6E-6 T 23-04-2016 IPR018392 LysM domain RBRH_RS11425 b7e187083a8f11228c655ba660158f97 329 Gene3D G3DSA:3.40.50.280 208 312 5.2E-7 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RBRH_RS11425 b7e187083a8f11228c655ba660158f97 329 Pfam PF13411 MerR HTH family regulatory protein 36 91 9.7E-13 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS11425 b7e187083a8f11228c655ba660158f97 329 Gene3D G3DSA:1.10.1660.10 36 91 5.6E-13 T 23-04-2016 RBRH_RS11425 b7e187083a8f11228c655ba660158f97 329 SMART SM00422 36 100 0.0053 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS11425 b7e187083a8f11228c655ba660158f97 329 SUPERFAMILY SSF52242 203 301 6.67E-8 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RBRH_RS11425 b7e187083a8f11228c655ba660158f97 329 SUPERFAMILY SSF46955 36 96 3.94E-13 T 23-04-2016 IPR009061 Putative DNA-binding domain RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 PANTHER PTHR11444 11 461 4.5E-268 T 23-04-2016 IPR000362 Fumarate lyase family RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 SUPERFAMILY SSF48557 4 446 2.98E-105 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 Gene3D G3DSA:1.10.275.10 9 124 1.3E-44 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 Gene3D G3DSA:1.10.40.30 396 451 7.4E-32 T 23-04-2016 RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 Pfam PF00206 Lyase 20 318 8.8E-57 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 Gene3D G3DSA:1.20.200.10 125 395 6.6E-89 T 23-04-2016 RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 18 460 1.6E-125 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 ProSitePatterns PS00163 Fumarate lyases signature. 300 309 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 Pfam PF08328 Adenylosuccinate lyase C-terminal 337 451 2.3E-50 T 23-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 PANTHER PTHR11444:SF17 11 461 4.5E-268 T 23-04-2016 RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 PRINTS PR00149 Fumarate lyase superfamily signature 257 284 2.7E-18 T 23-04-2016 IPR000362 Fumarate lyase family RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 PRINTS PR00149 Fumarate lyase superfamily signature 300 316 2.7E-18 T 23-04-2016 IPR000362 Fumarate lyase family RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 PRINTS PR00149 Fumarate lyase superfamily signature 122 140 2.7E-18 T 23-04-2016 IPR000362 Fumarate lyase family RBRH_RS01690 45df0efb842252e01511261b98b3d119 462 PRINTS PR00149 Fumarate lyase superfamily signature 168 186 2.7E-18 T 23-04-2016 IPR000362 Fumarate lyase family RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.601 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.7E-48 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.6E-59 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 SUPERFAMILY SSF54686 1 134 6.67E-54 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.7E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.7E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.7E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.7E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 Gene3D G3DSA:3.90.1170.10 22 135 7.2E-52 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04430 a338a343f29b7b449931083e8ab5fd8e 138 PANTHER PTHR12220 1 136 1.8E-72 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RBRH_RS01560 39bfe849f9bc2118cea8ff267722e0ba 166 Pfam PF02464 Competence-damaged protein 9 161 3.1E-57 T 23-04-2016 IPR008136 CinA, C-terminal RBRH_RS01560 39bfe849f9bc2118cea8ff267722e0ba 166 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 159 2.7E-46 T 23-04-2016 IPR008136 CinA, C-terminal RBRH_RS01560 39bfe849f9bc2118cea8ff267722e0ba 166 SUPERFAMILY SSF142433 8 161 2.48E-55 T 23-04-2016 IPR008136 CinA, C-terminal RBRH_RS01560 39bfe849f9bc2118cea8ff267722e0ba 166 PANTHER PTHR13939 9 165 6.2E-62 T 23-04-2016 RBRH_RS01560 39bfe849f9bc2118cea8ff267722e0ba 166 Gene3D G3DSA:3.90.950.20 8 163 1.4E-57 T 23-04-2016 IPR008136 CinA, C-terminal RBRH_RS11650 109b706725e4c1c25a903d6848605027 107 Pfam PF00034 Cytochrome c 21 101 5.1E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS11650 109b706725e4c1c25a903d6848605027 107 SUPERFAMILY SSF46626 25 101 7.93E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS11650 109b706725e4c1c25a903d6848605027 107 Gene3D G3DSA:1.10.760.10 24 101 2.6E-29 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS11650 109b706725e4c1c25a903d6848605027 107 PRINTS PR00606 Class ID cytochrome C signature 27 40 4.8E-18 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RBRH_RS11650 109b706725e4c1c25a903d6848605027 107 PRINTS PR00606 Class ID cytochrome C signature 80 90 4.8E-18 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RBRH_RS11650 109b706725e4c1c25a903d6848605027 107 PRINTS PR00606 Class ID cytochrome C signature 65 78 4.8E-18 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RBRH_RS11650 109b706725e4c1c25a903d6848605027 107 PRINTS PR00606 Class ID cytochrome C signature 92 102 4.8E-18 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RBRH_RS11650 109b706725e4c1c25a903d6848605027 107 PRINTS PR00606 Class ID cytochrome C signature 42 55 4.8E-18 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RBRH_RS02530 00d6cae0b621f49dff74c25157e55990 277 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 276 1.5E-88 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RBRH_RS02530 00d6cae0b621f49dff74c25157e55990 277 Pfam PF02569 Pantoate-beta-alanine ligase 3 275 2.4E-95 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RBRH_RS02530 00d6cae0b621f49dff74c25157e55990 277 Hamap MF_00158 Pantothenate synthetase [panC]. 2 277 37.155 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RBRH_RS02530 00d6cae0b621f49dff74c25157e55990 277 Gene3D G3DSA:3.40.50.620 1 169 1.4E-70 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02530 00d6cae0b621f49dff74c25157e55990 277 PANTHER PTHR21299:SF1 1 277 1.0E-112 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RBRH_RS02530 00d6cae0b621f49dff74c25157e55990 277 PANTHER PTHR21299 1 277 1.0E-112 T 23-04-2016 RBRH_RS02530 00d6cae0b621f49dff74c25157e55990 277 SUPERFAMILY SSF52374 1 277 5.32E-97 T 23-04-2016 RBRH_RS02530 00d6cae0b621f49dff74c25157e55990 277 Gene3D G3DSA:3.30.1300.10 172 277 1.4E-29 T 23-04-2016 RBRH_RS02530 00d6cae0b621f49dff74c25157e55990 277 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 80 7.2E-8 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RBRH_RS10895 5c5746fa1bca00832d19ff5055fd330b 128 Pfam PF01042 Endoribonuclease L-PSP 17 123 9.4E-27 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RBRH_RS10895 5c5746fa1bca00832d19ff5055fd330b 128 PANTHER PTHR11803 18 123 6.2E-35 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family RBRH_RS10895 5c5746fa1bca00832d19ff5055fd330b 128 Gene3D G3DSA:3.30.1330.40 12 124 1.4E-34 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RBRH_RS10895 5c5746fa1bca00832d19ff5055fd330b 128 SUPERFAMILY SSF55298 15 124 8.33E-36 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RBRH_RS16175 216aa1eea05849fc1cd38cd254cda617 172 Pfam PF13489 Methyltransferase domain 3 105 1.3E-8 T 23-04-2016 RBRH_RS16175 216aa1eea05849fc1cd38cd254cda617 172 SUPERFAMILY SSF53335 2 120 1.09E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS16175 216aa1eea05849fc1cd38cd254cda617 172 Gene3D G3DSA:3.40.50.150 23 114 1.6E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS04070 f610c2420068709cb59b7b308da34d7c 177 Pfam PF03245 Bacteriophage Rz lysis protein 52 168 8.6E-8 T 23-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 RBRH_RS07725 555fc9a25a370c2ace144f0a0c187198 458 SUPERFAMILY SSF53756 36 397 2.17E-61 T 23-04-2016 RBRH_RS07725 555fc9a25a370c2ace144f0a0c187198 458 PANTHER PTHR12526:SF380 4 366 4.3E-43 T 23-04-2016 RBRH_RS07725 555fc9a25a370c2ace144f0a0c187198 458 Gene3D G3DSA:3.40.50.2000 231 365 1.3E-18 T 23-04-2016 RBRH_RS07725 555fc9a25a370c2ace144f0a0c187198 458 Pfam PF00534 Glycosyl transferases group 1 230 369 7.3E-25 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RBRH_RS07725 555fc9a25a370c2ace144f0a0c187198 458 Pfam PF13439 Glycosyltransferase Family 4 48 223 2.8E-11 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RBRH_RS07725 555fc9a25a370c2ace144f0a0c187198 458 PANTHER PTHR12526 4 366 4.3E-43 T 23-04-2016 RBRH_RS02285 1ef4f92e56faa4d117526088c7210fca 398 PRINTS PR00075 Fatty acid desaturase family 1 signature 18 40 9.6E-5 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RBRH_RS02285 1ef4f92e56faa4d117526088c7210fca 398 PRINTS PR00075 Fatty acid desaturase family 1 signature 166 187 9.6E-5 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RBRH_RS02285 1ef4f92e56faa4d117526088c7210fca 398 PRINTS PR00075 Fatty acid desaturase family 1 signature 78 107 9.6E-5 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RBRH_RS02285 1ef4f92e56faa4d117526088c7210fca 398 PRINTS PR00075 Fatty acid desaturase family 1 signature 209 223 9.6E-5 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 RBRH_RS02285 1ef4f92e56faa4d117526088c7210fca 398 Pfam PF01610 Transposase 274 397 1.1E-11 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RBRH_RS02285 1ef4f92e56faa4d117526088c7210fca 398 Pfam PF00487 Fatty acid desaturase 18 220 5.1E-11 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RBRH_RS02285 1ef4f92e56faa4d117526088c7210fca 398 PANTHER PTHR11351:SF33 17 384 4.4E-145 T 23-04-2016 RBRH_RS02285 1ef4f92e56faa4d117526088c7210fca 398 PANTHER PTHR11351 17 384 4.4E-145 T 23-04-2016 RBRH_RS02035 be5062c4cfe27d7a60f7bbda4cc6427d 570 Gene3D G3DSA:2.40.160.50 189 569 5.4E-113 T 23-04-2016 RBRH_RS02035 be5062c4cfe27d7a60f7bbda4cc6427d 570 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 178 511 2.4E-30 T 23-04-2016 IPR005565 Haemolysin activator HlyB RBRH_RS02035 be5062c4cfe27d7a60f7bbda4cc6427d 570 Pfam PF08479 POTRA domain, ShlB-type 86 159 2.3E-16 T 23-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type RBRH_RS02035 be5062c4cfe27d7a60f7bbda4cc6427d 570 PANTHER PTHR34597 29 570 2.8E-144 T 23-04-2016 RBRH_RS02035 be5062c4cfe27d7a60f7bbda4cc6427d 570 PIRSF PIRSF029745 5 570 2.3E-140 T 23-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 RBRH_RS02035 be5062c4cfe27d7a60f7bbda4cc6427d 570 PANTHER PTHR34597:SF2 29 570 2.8E-144 T 23-04-2016 RBRH_RS02035 be5062c4cfe27d7a60f7bbda4cc6427d 570 Gene3D G3DSA:3.10.20.310 64 159 2.1E-25 T 23-04-2016 RBRH_RS01850 1dbc9fcf617fc4ce9049563a530b1441 299 Gene3D G3DSA:3.40.50.10330 5 148 9.6E-37 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RBRH_RS01850 1dbc9fcf617fc4ce9049563a530b1441 299 Pfam PF01513 ATP-NAD kinase 57 270 7.7E-54 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RBRH_RS01850 1dbc9fcf617fc4ce9049563a530b1441 299 Hamap MF_00361 NAD kinase [nadK]. 7 287 31.687 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RBRH_RS01850 1dbc9fcf617fc4ce9049563a530b1441 299 SUPERFAMILY SSF111331 8 289 3.14E-85 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RBRH_RS01850 1dbc9fcf617fc4ce9049563a530b1441 299 PANTHER PTHR20275 6 289 8.1E-88 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RBRH_RS01850 1dbc9fcf617fc4ce9049563a530b1441 299 Gene3D G3DSA:2.60.200.30 149 261 1.7E-41 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RBRH_RS06350 420cc437b6ab87d2fbf734d2513c78f2 232 PANTHER PTHR11934 1 232 5.2E-107 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RBRH_RS06350 420cc437b6ab87d2fbf734d2513c78f2 232 PANTHER PTHR11934:SF11 1 232 5.2E-107 T 23-04-2016 RBRH_RS06350 420cc437b6ab87d2fbf734d2513c78f2 232 SUPERFAMILY SSF100950 1 150 2.55E-42 T 23-04-2016 RBRH_RS06350 420cc437b6ab87d2fbf734d2513c78f2 232 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 227 31.69 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RBRH_RS06350 420cc437b6ab87d2fbf734d2513c78f2 232 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 13 224 6.2E-62 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RBRH_RS06350 420cc437b6ab87d2fbf734d2513c78f2 232 Gene3D G3DSA:3.40.50.1360 1 137 5.7E-52 T 23-04-2016 RBRH_RS06350 420cc437b6ab87d2fbf734d2513c78f2 232 Pfam PF04198 Putative sugar-binding domain 4 46 2.1E-4 T 23-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 RBRH_RS06350 420cc437b6ab87d2fbf734d2513c78f2 232 Gene3D G3DSA:3.30.70.260 138 197 1.5E-25 T 23-04-2016 RBRH_RS06350 420cc437b6ab87d2fbf734d2513c78f2 232 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 223 2.1E-55 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RBRH_RS06350 420cc437b6ab87d2fbf734d2513c78f2 232 SUPERFAMILY SSF75445 130 208 2.35E-21 T 23-04-2016 RBRH_RS04395 dc1f3dbed4ba528f46861cb1af0e6cd7 218 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.345 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04395 dc1f3dbed4ba528f46861cb1af0e6cd7 218 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site RBRH_RS04395 dc1f3dbed4ba528f46861cb1af0e6cd7 218 Gene3D G3DSA:4.10.960.10 86 160 5.7E-27 T 23-04-2016 RBRH_RS04395 dc1f3dbed4ba528f46861cb1af0e6cd7 218 Pfam PF00297 Ribosomal protein L3 66 186 6.7E-14 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04395 dc1f3dbed4ba528f46861cb1af0e6cd7 218 SUPERFAMILY SSF50447 2 213 5.65E-76 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain RBRH_RS04395 dc1f3dbed4ba528f46861cb1af0e6cd7 218 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 206 1.7E-84 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04395 dc1f3dbed4ba528f46861cb1af0e6cd7 218 PANTHER PTHR11229 4 215 2.1E-103 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04395 dc1f3dbed4ba528f46861cb1af0e6cd7 218 Gene3D G3DSA:2.40.30.10 4 33 1.0E-7 T 23-04-2016 RBRH_RS04395 dc1f3dbed4ba528f46861cb1af0e6cd7 218 Gene3D G3DSA:2.40.30.10 161 215 1.0E-7 T 23-04-2016 RBRH_RS07665 e1b999143859bd8e2b764a02cc1000f1 86 SUPERFAMILY SSF47598 1 79 5.56E-21 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RBRH_RS07665 e1b999143859bd8e2b764a02cc1000f1 86 Gene3D G3DSA:1.20.5.780 3 80 6.9E-18 T 23-04-2016 RBRH_RS07665 e1b999143859bd8e2b764a02cc1000f1 86 PANTHER PTHR35401 1 85 5.2E-26 T 23-04-2016 RBRH_RS07665 e1b999143859bd8e2b764a02cc1000f1 86 PANTHER PTHR35401:SF1 1 85 5.2E-26 T 23-04-2016 RBRH_RS07665 e1b999143859bd8e2b764a02cc1000f1 86 Pfam PF08681 Protein of unknown function (DUF1778) 6 80 8.3E-26 T 23-04-2016 IPR014795 Vibrio phage ICP1, Orf50 RBRH_RS00895 bb7becbce05faec6bbe59a10eb1d7924 487 Pfam PF00171 Aldehyde dehydrogenase family 15 473 8.6E-168 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS00895 bb7becbce05faec6bbe59a10eb1d7924 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RBRH_RS00895 bb7becbce05faec6bbe59a10eb1d7924 487 PANTHER PTHR11699 1 485 8.4E-262 T 23-04-2016 RBRH_RS00895 bb7becbce05faec6bbe59a10eb1d7924 487 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 3 486 8.3E-219 T 23-04-2016 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 KEGG: 00010+1.2.1.-|KEGG: 00220+1.2.1.-|KEGG: 00260+1.2.1.-|KEGG: 00281+1.2.1.-|KEGG: 00300+1.2.1.-|KEGG: 00330+1.2.1.-|KEGG: 00380+1.2.1.-|KEGG: 00620+1.2.1.-|KEGG: 00624+1.2.1.-|KEGG: 00626+1.2.1.-|KEGG: 00640+1.2.1.-|KEGG: 00903+1.2.1.-|UniPathway: UPA00208 RBRH_RS00895 bb7becbce05faec6bbe59a10eb1d7924 487 Gene3D G3DSA:3.40.309.10 257 448 8.3E-67 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RBRH_RS00895 bb7becbce05faec6bbe59a10eb1d7924 487 Gene3D G3DSA:3.40.605.10 2 256 1.1E-95 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS00895 bb7becbce05faec6bbe59a10eb1d7924 487 PANTHER PTHR11699:SF213 1 485 8.4E-262 T 23-04-2016 RBRH_RS00895 bb7becbce05faec6bbe59a10eb1d7924 487 SUPERFAMILY SSF53720 2 479 8.25E-162 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RBRH_RS00895 bb7becbce05faec6bbe59a10eb1d7924 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RBRH_RS10470 7e25d12ad9783b5096a4867cc273f11d 306 Pfam PF01863 Protein of unknown function DUF45 89 298 3.8E-60 T 23-04-2016 IPR002725 Protein of unknown function DUF45 RBRH_RS10470 7e25d12ad9783b5096a4867cc273f11d 306 PANTHER PTHR30399 70 302 4.9E-44 T 23-04-2016 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 SMART SM00738 10 119 1.8E-47 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 PANTHER PTHR30265 11 185 4.7E-80 T 23-04-2016 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 1.3E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 PRINTS PR00338 Transcription termination factor NUSG signature 65 77 1.3E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 1.3E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 SUPERFAMILY SSF50104 129 185 2.11E-19 T 23-04-2016 IPR008991 Translation protein SH3-like domain RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 SMART SM00739 131 158 6.1E-5 T 23-04-2016 IPR005824 KOW RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 10 185 25.482 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 Gene3D G3DSA:2.30.30.30 124 185 6.4E-30 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 Pfam PF02357 Transcription termination factor nusG 11 116 1.2E-27 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 Gene3D G3DSA:3.30.70.940 11 122 3.4E-46 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 SUPERFAMILY SSF82679 11 121 6.28E-39 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 13 185 3.1E-69 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 Pfam PF00467 KOW motif 134 165 1.6E-6 T 23-04-2016 IPR005824 KOW RBRH_RS04320 a8fad57f6d2bc9b901d281561ac0317d 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RBRH_RS11775 ee6b3f15059ed232433f361535ea1631 318 Pfam PF06166 Protein of unknown function (DUF979) 5 316 1.3E-123 T 23-04-2016 IPR009323 Protein of unknown function DUF979 RBRH_RS02375 155e3b2c389d83645f0c012a15341046 458 PANTHER PTHR37319 4 455 4.3E-50 T 23-04-2016 RBRH_RS02375 155e3b2c389d83645f0c012a15341046 458 Pfam PF14706 Transposase DNA-binding 8 64 1.8E-21 T 23-04-2016 IPR014735 Transposase, Tn5-like, N-terminal RBRH_RS02375 155e3b2c389d83645f0c012a15341046 458 Gene3D G3DSA:3.90.350.10 67 346 6.5E-90 T 23-04-2016 IPR014736 Transposase, Tn5-like, core RBRH_RS02375 155e3b2c389d83645f0c012a15341046 458 Pfam PF02281 Transposase Tn5 dimerisation domain 361 453 4.8E-11 T 23-04-2016 IPR003201 Transposase Tn5, dimerisation RBRH_RS02375 155e3b2c389d83645f0c012a15341046 458 PANTHER PTHR37319:SF1 4 455 4.3E-50 T 23-04-2016 RBRH_RS02375 155e3b2c389d83645f0c012a15341046 458 Gene3D G3DSA:1.10.246.40 5 64 8.5E-22 T 23-04-2016 IPR014735 Transposase, Tn5-like, N-terminal RBRH_RS02375 155e3b2c389d83645f0c012a15341046 458 SUPERFAMILY SSF53098 7 456 3.19E-118 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS02375 155e3b2c389d83645f0c012a15341046 458 Gene3D G3DSA:1.10.740.10 350 456 5.4E-30 T 23-04-2016 IPR014737 Transposase, Tn5-like, C-terminal RBRH_RS01565 8cc8064f63f0da44bb168a2db810c7b4 190 Pfam PF04608 Phosphatidylglycerophosphatase A 46 187 1.0E-45 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RBRH_RS01565 8cc8064f63f0da44bb168a2db810c7b4 190 SUPERFAMILY SSF101307 39 188 4.45E-38 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RBRH_RS01565 8cc8064f63f0da44bb168a2db810c7b4 190 PANTHER PTHR36305 31 188 2.6E-46 T 23-04-2016 RBRH_RS06515 2d09ae365961853e382faebaff6d30c1 259 SUPERFAMILY SSF55315 2 101 2.24E-13 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like RBRH_RS06515 2d09ae365961853e382faebaff6d30c1 259 Gene3D G3DSA:3.40.1280.10 112 257 1.6E-48 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RBRH_RS06515 2d09ae365961853e382faebaff6d30c1 259 Pfam PF00588 SpoU rRNA Methylase family 114 249 1.3E-33 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RBRH_RS06515 2d09ae365961853e382faebaff6d30c1 259 SUPERFAMILY SSF75217 109 257 1.83E-41 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RBRH_RS06515 2d09ae365961853e382faebaff6d30c1 259 Gene3D G3DSA:3.30.1330.30 3 100 1.1E-13 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like RBRH_RS06515 2d09ae365961853e382faebaff6d30c1 259 PANTHER PTHR12029 1 257 6.5E-45 T 23-04-2016 RBRH_RS10055 c8ef343ae536f186a7b97514f1800b1b 109 SUPERFAMILY SSF52096 4 54 6.22E-5 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS10055 c8ef343ae536f186a7b97514f1800b1b 109 Gene3D G3DSA:3.90.226.10 3 52 5.0E-4 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS09575 c60f493d7a071f27cff99160be1aec60 100 Pfam PF07369 Protein of unknown function (DUF1488) 11 89 1.2E-23 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RBRH_RS09575 c60f493d7a071f27cff99160be1aec60 100 SUPERFAMILY SSF160272 10 98 5.89E-18 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RBRH_RS09575 c60f493d7a071f27cff99160be1aec60 100 Gene3D G3DSA:3.30.160.140 10 82 1.1E-9 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RBRH_RS09590 10582622641e596c1fd27d9dd752290c 97 PANTHER PTHR34606 12 97 5.9E-12 T 23-04-2016 RBRH_RS09590 10582622641e596c1fd27d9dd752290c 97 Pfam PF04972 BON domain 28 96 2.1E-19 T 23-04-2016 IPR007055 BON domain RBRH_RS09590 10582622641e596c1fd27d9dd752290c 97 SMART SM00749 33 97 1.9E-4 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RBRH_RS10075 89c043e81bd56a238348f653a8342f42 273 SUPERFAMILY SSF141868 83 268 2.75E-16 T 23-04-2016 IPR001633 EAL domain RBRH_RS10075 89c043e81bd56a238348f653a8342f42 273 Pfam PF00563 EAL domain 124 267 2.7E-11 T 23-04-2016 IPR001633 EAL domain RBRH_RS10075 89c043e81bd56a238348f653a8342f42 273 Gene3D G3DSA:3.20.20.450 94 263 1.1E-8 T 23-04-2016 IPR001633 EAL domain RBRH_RS10765 c11e002cf75e6dce767127392238697f 133 PANTHER PTHR11049 14 132 4.1E-43 T 23-04-2016 RBRH_RS10765 c11e002cf75e6dce767127392238697f 133 SUPERFAMILY SSF54637 11 132 1.25E-34 T 23-04-2016 IPR029069 HotDog domain RBRH_RS10765 c11e002cf75e6dce767127392238697f 133 PANTHER PTHR11049:SF5 14 132 4.1E-43 T 23-04-2016 RBRH_RS10765 c11e002cf75e6dce767127392238697f 133 Gene3D G3DSA:3.10.129.10 9 132 3.7E-37 T 23-04-2016 IPR029069 HotDog domain RBRH_RS10765 c11e002cf75e6dce767127392238697f 133 Pfam PF03061 Thioesterase superfamily 28 102 4.7E-15 T 23-04-2016 IPR006683 Thioesterase domain RBRH_RS05855 eb6ef3b2f65a7011499251d2a5d0f129 191 SUPERFAMILY SSF53271 9 181 1.1E-36 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS05855 eb6ef3b2f65a7011499251d2a5d0f129 191 Pfam PF00156 Phosphoribosyl transferase domain 20 164 1.4E-23 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RBRH_RS05855 eb6ef3b2f65a7011499251d2a5d0f129 191 Gene3D G3DSA:3.40.50.2020 14 172 2.9E-37 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS16325 85b0ee108743176f9e54c28cc0bd8f8a 758 Gene3D G3DSA:3.55.50.10 200 273 5.5E-5 T 23-04-2016 RBRH_RS16325 85b0ee108743176f9e54c28cc0bd8f8a 758 Pfam PF05954 Phage late control gene D protein (GPD) 160 426 3.3E-11 T 23-04-2016 RBRH_RS16325 85b0ee108743176f9e54c28cc0bd8f8a 758 SUPERFAMILY SSF69279 105 275 3.74E-12 T 23-04-2016 RBRH_RS16325 85b0ee108743176f9e54c28cc0bd8f8a 758 SUPERFAMILY SSF69255 454 522 1.39E-7 T 23-04-2016 RBRH_RS16325 85b0ee108743176f9e54c28cc0bd8f8a 758 Gene3D G3DSA:2.40.50.230 471 522 7.5E-5 T 23-04-2016 IPR006531 Gp5 N-terminal RBRH_RS01705 82a2a3962df1a6909dbe6421de66a238 158 PANTHER PTHR22769 8 151 1.7E-15 T 23-04-2016 RBRH_RS01705 82a2a3962df1a6909dbe6421de66a238 158 Gene3D G3DSA:3.90.79.10 6 152 4.3E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS01705 82a2a3962df1a6909dbe6421de66a238 158 Pfam PF00293 NUDIX domain 8 126 4.3E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RBRH_RS01705 82a2a3962df1a6909dbe6421de66a238 158 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RBRH_RS01705 82a2a3962df1a6909dbe6421de66a238 158 SUPERFAMILY SSF55811 6 147 1.08E-25 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS10100 538641003ed251c4cdd75199f9f560a9 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 293 2.7E-48 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 RBRH_RS10100 538641003ed251c4cdd75199f9f560a9 299 SUPERFAMILY SSF53807 27 297 2.45E-61 T 23-04-2016 RBRH_RS10100 538641003ed251c4cdd75199f9f560a9 299 Gene3D G3DSA:3.40.50.1980 25 178 1.9E-31 T 23-04-2016 RBRH_RS10100 538641003ed251c4cdd75199f9f560a9 299 Gene3D G3DSA:3.40.50.1980 187 295 3.8E-15 T 23-04-2016 RBRH_RS10100 538641003ed251c4cdd75199f9f560a9 299 PANTHER PTHR30477:SF1 32 261 1.3E-38 T 23-04-2016 RBRH_RS10100 538641003ed251c4cdd75199f9f560a9 299 PANTHER PTHR30477 32 261 1.3E-38 T 23-04-2016 RBRH_RS10100 538641003ed251c4cdd75199f9f560a9 299 PRINTS PR00690 Adhesin family signature 237 255 2.2E-5 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 RBRH_RS10100 538641003ed251c4cdd75199f9f560a9 299 PRINTS PR00690 Adhesin family signature 76 93 2.2E-5 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 RBRH_RS10100 538641003ed251c4cdd75199f9f560a9 299 PRINTS PR00690 Adhesin family signature 31 49 2.2E-5 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 RBRH_RS10100 538641003ed251c4cdd75199f9f560a9 299 PRINTS PR00690 Adhesin family signature 63 76 2.2E-5 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 RBRH_RS08485 4dd80f81ddb05625099ca247ed41c5c4 272 PANTHER PTHR37323 35 267 3.7E-71 T 23-04-2016 RBRH_RS08485 4dd80f81ddb05625099ca247ed41c5c4 272 PANTHER PTHR37323:SF1 35 267 3.7E-71 T 23-04-2016 RBRH_RS08485 4dd80f81ddb05625099ca247ed41c5c4 272 Pfam PF13444 Acetyltransferase (GNAT) domain 52 152 3.6E-34 T 23-04-2016 RBRH_RS08485 4dd80f81ddb05625099ca247ed41c5c4 272 Gene3D G3DSA:3.40.630.30 37 238 1.7E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS08485 4dd80f81ddb05625099ca247ed41c5c4 272 SUPERFAMILY SSF55729 35 241 2.66E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS09030 996cb9f02069b68a3df4db394dd17006 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 97 1.7E-23 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RBRH_RS09030 996cb9f02069b68a3df4db394dd17006 101 PANTHER PTHR11434 3 101 1.6E-39 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RBRH_RS09030 996cb9f02069b68a3df4db394dd17006 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.552 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 316 3.6E-149 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 SUPERFAMILY SSF52096 5 316 1.97E-101 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 PANTHER PTHR22855 1 318 2.1E-123 T 23-04-2016 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 5.4E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 5.4E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 5.4E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 5.4E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 5.4E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 5.4E-44 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 3.5E-65 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.096 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 Gene3D G3DSA:3.90.226.10 60 273 2.0E-49 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS07985 f45efa4952eb45c6fd2fad8d04ca8182 323 PANTHER PTHR22855:SF42 1 318 2.1E-123 T 23-04-2016 RBRH_RS06625 fc5ea7ba2485644704e673ac0a3f257a 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 40.777 T 23-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RBRH_RS06625 fc5ea7ba2485644704e673ac0a3f257a 199 SUPERFAMILY SSF52218 1 197 1.31E-56 T 23-04-2016 IPR029039 Flavoprotein-like domain RBRH_RS06625 fc5ea7ba2485644704e673ac0a3f257a 199 Gene3D G3DSA:3.40.50.360 1 197 2.0E-69 T 23-04-2016 IPR029039 Flavoprotein-like domain RBRH_RS06625 fc5ea7ba2485644704e673ac0a3f257a 199 PANTHER PTHR30546 1 197 3.4E-109 T 23-04-2016 RBRH_RS06625 fc5ea7ba2485644704e673ac0a3f257a 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 7.8E-89 T 23-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RBRH_RS06625 fc5ea7ba2485644704e673ac0a3f257a 199 PANTHER PTHR30546:SF10 1 197 3.4E-109 T 23-04-2016 RBRH_RS06625 fc5ea7ba2485644704e673ac0a3f257a 199 Pfam PF03358 NADPH-dependent FMN reductase 13 124 1.1E-10 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RBRH_RS10865 31db4c6c38687a9e7a26f454991bc572 159 SUPERFAMILY SSF54197 17 142 1.34E-35 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 RBRH_RS10865 31db4c6c38687a9e7a26f454991bc572 159 Pfam PF01230 HIT domain 42 113 5.0E-13 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RBRH_RS10865 31db4c6c38687a9e7a26f454991bc572 159 PANTHER PTHR23089:SF13 47 131 3.3E-20 T 23-04-2016 RBRH_RS10865 31db4c6c38687a9e7a26f454991bc572 159 PANTHER PTHR23089 47 131 3.3E-20 T 23-04-2016 IPR001310 Histidine triad (HIT) protein RBRH_RS10865 31db4c6c38687a9e7a26f454991bc572 159 Gene3D G3DSA:3.30.428.10 16 143 6.0E-38 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 RBRH_RS07855 126562322d70e079f34847f1d0ecb952 214 SUPERFAMILY SSF143081 24 201 2.49E-48 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS07855 126562322d70e079f34847f1d0ecb952 214 PANTHER PTHR13604 68 199 1.2E-14 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS07855 126562322d70e079f34847f1d0ecb952 214 Gene3D G3DSA:3.90.1680.10 29 199 3.7E-32 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS07855 126562322d70e079f34847f1d0ecb952 214 Pfam PF02586 SOS response associated peptidase (SRAP) 44 189 1.8E-23 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS16125 76e34bbb08817f6a67dc7fafabcf1c8a 182 Gene3D G3DSA:3.40.630.30 17 154 9.6E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS16125 76e34bbb08817f6a67dc7fafabcf1c8a 182 Pfam PF00583 Acetyltransferase (GNAT) family 78 147 8.7E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RBRH_RS16125 76e34bbb08817f6a67dc7fafabcf1c8a 182 SUPERFAMILY SSF55729 19 155 6.48E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS01610 d3ec023914cc3b13603d1d87d9389b8c 142 Pfam PF01475 Ferric uptake regulator family 10 129 6.0E-45 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RBRH_RS01610 d3ec023914cc3b13603d1d87d9389b8c 142 SUPERFAMILY SSF46785 6 133 6.64E-40 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS01610 d3ec023914cc3b13603d1d87d9389b8c 142 Gene3D G3DSA:1.10.10.10 5 82 1.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS01610 d3ec023914cc3b13603d1d87d9389b8c 142 PANTHER PTHR33202 5 134 3.1E-38 T 23-04-2016 RBRH_RS07430 8a2257fdfd5bc5c7c75ee8e8c03f9d75 741 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 535 657 1.0E-23 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RBRH_RS07430 8a2257fdfd5bc5c7c75ee8e8c03f9d75 741 SUPERFAMILY SSF52540 485 718 3.14E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07430 8a2257fdfd5bc5c7c75ee8e8c03f9d75 741 SMART SM00382 530 664 1.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS07430 8a2257fdfd5bc5c7c75ee8e8c03f9d75 741 PANTHER PTHR23073 527 738 1.3E-37 T 23-04-2016 RBRH_RS07430 8a2257fdfd5bc5c7c75ee8e8c03f9d75 741 PANTHER PTHR23073 130 453 1.3E-37 T 23-04-2016 RBRH_RS07430 8a2257fdfd5bc5c7c75ee8e8c03f9d75 741 Gene3D G3DSA:3.40.50.300 487 673 1.3E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07430 8a2257fdfd5bc5c7c75ee8e8c03f9d75 741 PANTHER PTHR23073:SF37 527 738 1.3E-37 T 23-04-2016 RBRH_RS07430 8a2257fdfd5bc5c7c75ee8e8c03f9d75 741 PANTHER PTHR23073:SF37 130 453 1.3E-37 T 23-04-2016 RBRH_RS03130 f4db13d5cf87133ab4f70f89d4f7c8c5 209 Gene3D G3DSA:1.10.60.30 37 108 7.4E-29 T 23-04-2016 IPR023153 PSPTO4464-like domain RBRH_RS03130 f4db13d5cf87133ab4f70f89d4f7c8c5 209 PANTHER PTHR38101:SF1 29 201 7.1E-53 T 23-04-2016 RBRH_RS03130 f4db13d5cf87133ab4f70f89d4f7c8c5 209 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 21 184 21.378 T 23-04-2016 IPR006839 Ribosome-associated, YjgA RBRH_RS03130 f4db13d5cf87133ab4f70f89d4f7c8c5 209 PANTHER PTHR38101 29 201 7.1E-53 T 23-04-2016 RBRH_RS03130 f4db13d5cf87133ab4f70f89d4f7c8c5 209 Gene3D G3DSA:1.10.60.30 116 184 1.6E-27 T 23-04-2016 IPR023153 PSPTO4464-like domain RBRH_RS03130 f4db13d5cf87133ab4f70f89d4f7c8c5 209 SUPERFAMILY SSF158710 37 183 4.05E-47 T 23-04-2016 RBRH_RS03130 f4db13d5cf87133ab4f70f89d4f7c8c5 209 Pfam PF04751 Protein of unknown function (DUF615) 27 180 2.4E-52 T 23-04-2016 IPR006839 Ribosome-associated, YjgA RBRH_RS10210 cd7d346356e7b6b8916da64927e66fac 276 Pfam PF03591 AzlC protein 47 188 4.2E-30 T 23-04-2016 IPR011606 Branched-chain amino acid transport, permease RBRH_RS10210 cd7d346356e7b6b8916da64927e66fac 276 PANTHER PTHR34979 19 269 5.0E-26 T 23-04-2016 RBRH_RS01760 d73b0f14de85963d1e12170c45eda843 389 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 17 382 1.9E-152 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01760 d73b0f14de85963d1e12170c45eda843 389 PANTHER PTHR21148:SF26 9 386 5.0E-172 T 23-04-2016 RBRH_RS01760 d73b0f14de85963d1e12170c45eda843 389 Gene3D G3DSA:3.20.20.105 12 384 2.1E-165 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01760 d73b0f14de85963d1e12170c45eda843 389 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 17 382 4.0E-161 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01760 d73b0f14de85963d1e12170c45eda843 389 SUPERFAMILY SSF51713 14 381 7.59E-156 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01760 d73b0f14de85963d1e12170c45eda843 389 PANTHER PTHR21148 9 386 5.0E-172 T 23-04-2016 RBRH_RS01760 d73b0f14de85963d1e12170c45eda843 389 Pfam PF01702 Queuine tRNA-ribosyltransferase 141 380 5.7E-90 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01760 d73b0f14de85963d1e12170c45eda843 389 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 15 378 55.35 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 509 5.6E-138 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PANTHER PTHR11206:SF90 221 446 1.4E-71 T 23-04-2016 RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PANTHER PTHR11206:SF90 506 515 1.4E-71 T 23-04-2016 RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PANTHER PTHR11206:SF90 70 82 1.4E-71 T 23-04-2016 RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PANTHER PTHR11206:SF90 463 484 1.4E-71 T 23-04-2016 RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PIRSF PIRSF002869 1 516 7.7E-143 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PRINTS PR01806 Virulence factor MviN signature 361 380 2.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PRINTS PR01806 Virulence factor MviN signature 52 68 2.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PRINTS PR01806 Virulence factor MviN signature 133 157 2.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PRINTS PR01806 Virulence factor MviN signature 33 52 2.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PRINTS PR01806 Virulence factor MviN signature 413 430 2.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PRINTS PR01806 Virulence factor MviN signature 263 289 2.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PRINTS PR01806 Virulence factor MviN signature 157 178 2.5E-78 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 Pfam PF03023 MviN-like protein 28 474 2.1E-131 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PANTHER PTHR11206 221 446 1.4E-71 T 23-04-2016 RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PANTHER PTHR11206 506 515 1.4E-71 T 23-04-2016 RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PANTHER PTHR11206 70 82 1.4E-71 T 23-04-2016 RBRH_RS02025 a7593cd17a36409ce1b0ad13fe0e7c2a 516 PANTHER PTHR11206 463 484 1.4E-71 T 23-04-2016 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 Pfam PF02167 Cytochrome C1 family 92 248 2.5E-11 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 Pfam PF02167 Cytochrome C1 family 41 80 2.9E-6 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 PANTHER PTHR10266:SF3 42 166 1.5E-39 T 23-04-2016 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 PANTHER PTHR10266:SF3 191 250 1.5E-39 T 23-04-2016 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 SUPERFAMILY SSF46626 191 214 1.53E-50 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 SUPERFAMILY SSF46626 25 164 1.53E-50 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 Gene3D G3DSA:1.20.5.100 219 250 2.7E-5 T 23-04-2016 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 Gene3D G3DSA:1.10.760.10 25 215 7.2E-62 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 PRINTS PR00603 Cytochrome C1 signature 109 133 3.7E-10 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 PRINTS PR00603 Cytochrome C1 signature 48 67 3.7E-10 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 PRINTS PR00603 Cytochrome C1 signature 196 215 3.7E-10 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 PRINTS PR00603 Cytochrome C1 signature 215 230 3.7E-10 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 PANTHER PTHR10266 42 166 1.5E-39 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RBRH_RS04845 57e1f527ef31de9eaf141fd583054583 250 PANTHER PTHR10266 191 250 1.5E-39 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RBRH_RS00900 34d0d9f32854a663585acb8228bc6590 283 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 9.0E-146 T 23-04-2016 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe KEGG: 00350+1.13.11.15|UniPathway: UPA00208 RBRH_RS00900 34d0d9f32854a663585acb8228bc6590 283 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 9.9E-76 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RBRH_RS00900 34d0d9f32854a663585acb8228bc6590 283 Gene3D G3DSA:3.40.830.10 5 272 1.5E-24 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RBRH_RS00900 34d0d9f32854a663585acb8228bc6590 283 SUPERFAMILY SSF53213 12 279 1.07E-51 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RBRH_RS05430 4a498cd192227b643ac20b41d848b04e 223 Pfam PF08808 RES domain 66 207 5.7E-30 T 23-04-2016 IPR014914 RES domain RBRH_RS05430 4a498cd192227b643ac20b41d848b04e 223 SMART SM00953 73 201 5.1E-28 T 23-04-2016 IPR014914 RES domain RBRH_RS10535 24cd84ff834b963751a198f161be294b 177 SUPERFAMILY SSF51225 32 95 4.58E-6 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS10535 24cd84ff834b963751a198f161be294b 177 Gene3D G3DSA:2.10.25.20 66 133 2.3E-7 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS03540 38509ce5946811a778c6e0b0f04744f8 295 Pfam PF00589 Phage integrase family 169 293 2.3E-14 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS03540 38509ce5946811a778c6e0b0f04744f8 295 SUPERFAMILY SSF56349 64 292 7.95E-41 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RBRH_RS03540 38509ce5946811a778c6e0b0f04744f8 295 Gene3D G3DSA:1.10.443.10 168 292 4.1E-20 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS03540 38509ce5946811a778c6e0b0f04744f8 295 Gene3D G3DSA:1.10.150.130 64 163 4.3E-5 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RBRH_RS03540 38509ce5946811a778c6e0b0f04744f8 295 PANTHER PTHR30349 104 293 1.0E-25 T 23-04-2016 RBRH_RS03540 38509ce5946811a778c6e0b0f04744f8 295 PANTHER PTHR30349:SF20 104 293 1.0E-25 T 23-04-2016 RBRH_RS00890 956d6b1ec9c970d185045e4f82e2bfb4 255 PANTHER PTHR11820 21 251 2.0E-122 T 23-04-2016 RBRH_RS00890 956d6b1ec9c970d185045e4f82e2bfb4 255 Gene3D G3DSA:3.90.850.10 38 248 1.8E-78 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS00890 956d6b1ec9c970d185045e4f82e2bfb4 255 SUPERFAMILY SSF56529 37 249 8.37E-76 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS00890 956d6b1ec9c970d185045e4f82e2bfb4 255 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 247 3.2E-116 T 23-04-2016 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 RBRH_RS00890 956d6b1ec9c970d185045e4f82e2bfb4 255 PANTHER PTHR11820:SF8 21 251 2.0E-122 T 23-04-2016 RBRH_RS00890 956d6b1ec9c970d185045e4f82e2bfb4 255 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 48 245 1.4E-63 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS06845 d257e237f0165dd2aad650112983fa2b 119 Gene3D G3DSA:3.40.50.980 2 41 6.1E-4 T 23-04-2016 RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 522 546 1.4E-4 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 250 276 1.6E-5 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 Gene3D G3DSA:3.40.50.300 20 272 4.3E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 Gene3D G3DSA:3.40.50.300 289 545 7.6E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 PANTHER PTHR24220:SF574 23 428 3.8E-158 T 23-04-2016 RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 SMART SM00382 327 519 3.7E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 SMART SM00382 46 248 3.1E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 SUPERFAMILY SSF52540 290 542 1.27E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 Pfam PF00005 ABC transporter 318 471 8.5E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 Pfam PF00005 ABC transporter 38 193 7.6E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 PANTHER PTHR24220 23 428 3.8E-158 T 23-04-2016 RBRH_RS05555 3804455efc94a33b58e930a0be2b4f89 553 SUPERFAMILY SSF52540 21 270 8.54E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01225 5b032e0fb6d7da969aed8a86ba6a376e 1837 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1732 1752 1.1E-7 T 23-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 RBRH_RS01225 5b032e0fb6d7da969aed8a86ba6a376e 1837 SUPERFAMILY SSF54523 1744 1837 1.07E-18 T 23-04-2016 RBRH_RS01225 5b032e0fb6d7da969aed8a86ba6a376e 1837 Gene3D G3DSA:3.30.1300.30 1760 1837 6.2E-25 T 23-04-2016 RBRH_RS01225 5b032e0fb6d7da969aed8a86ba6a376e 1837 Pfam PF03895 YadA-like C-terminal region 1759 1837 1.1E-19 T 23-04-2016 IPR005594 YadA-like, C-terminal RBRH_RS01225 5b032e0fb6d7da969aed8a86ba6a376e 1837 SUPERFAMILY SSF101967 1718 1755 7.32E-7 T 23-04-2016 RBRH_RS02820 712e757565f8be5c9a292ed131340894 243 Pfam PF13590 Domain of unknown function (DUF4136) 47 191 3.0E-12 T 23-04-2016 IPR025411 Domain of unknown function DUF4136 RBRH_RS05255 5e441e3c22c7fa84587605455863eb46 137 Pfam PF13279 Thioesterase-like superfamily 17 135 4.6E-17 T 23-04-2016 RBRH_RS05255 5e441e3c22c7fa84587605455863eb46 137 PANTHER PTHR31793 15 137 4.9E-29 T 23-04-2016 RBRH_RS05255 5e441e3c22c7fa84587605455863eb46 137 Gene3D G3DSA:3.10.129.10 6 137 7.1E-43 T 23-04-2016 IPR029069 HotDog domain RBRH_RS05255 5e441e3c22c7fa84587605455863eb46 137 SUPERFAMILY SSF54637 7 137 2.42E-34 T 23-04-2016 IPR029069 HotDog domain RBRH_RS05255 5e441e3c22c7fa84587605455863eb46 137 PANTHER PTHR31793:SF1 15 137 4.9E-29 T 23-04-2016 RBRH_RS01255 354ede7e98cc14b906428c9080fe47d6 119 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 14.879 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RBRH_RS01255 354ede7e98cc14b906428c9080fe47d6 119 Pfam PF04999 Cell division protein FtsL 3 81 1.4E-15 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RBRH_RS01255 354ede7e98cc14b906428c9080fe47d6 119 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 83 1.3E-22 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RBRH_RS06300 eade777571637c7167ef2f7ef383ca9d 269 Pfam PF06629 MltA-interacting protein MipA 44 269 1.6E-41 T 23-04-2016 IPR010583 MltA-interacting MipA RBRH_RS07225 0baa6fba2f575ad3943d1a84161f7020 67 Pfam PF06945 Protein of unknown function (DUF1289) 11 54 8.3E-19 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 RBRH_RS07225 0baa6fba2f575ad3943d1a84161f7020 67 PANTHER PTHR35175 10 53 3.4E-13 T 23-04-2016 RBRH_RS10010 0a6f8e3124254ad5bc2ef1ccc101dc14 287 Pfam PF08543 Phosphomethylpyrimidine kinase 16 254 1.7E-47 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 RBRH_RS10010 0a6f8e3124254ad5bc2ef1ccc101dc14 287 PANTHER PTHR20858 1 254 1.1E-19 T 23-04-2016 RBRH_RS10010 0a6f8e3124254ad5bc2ef1ccc101dc14 287 PANTHER PTHR20858:SF17 1 254 1.1E-19 T 23-04-2016 RBRH_RS10010 0a6f8e3124254ad5bc2ef1ccc101dc14 287 Gene3D G3DSA:3.40.1190.20 7 261 8.6E-48 T 23-04-2016 IPR029056 Ribokinase-like RBRH_RS10010 0a6f8e3124254ad5bc2ef1ccc101dc14 287 SUPERFAMILY SSF53613 5 264 2.95E-39 T 23-04-2016 IPR029056 Ribokinase-like RBRH_RS14165 ad371b86d8b03589c59002c6ff9b4258 83 Gene3D G3DSA:3.90.350.10 1 45 3.1E-18 T 23-04-2016 IPR014736 Transposase, Tn5-like, core RBRH_RS14165 ad371b86d8b03589c59002c6ff9b4258 83 SUPERFAMILY SSF53098 1 80 2.05E-19 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS10110 ee961d38f01ba1cc945518d8456009eb 264 PANTHER PTHR30477:SF0 1 259 9.1E-41 T 23-04-2016 RBRH_RS10110 ee961d38f01ba1cc945518d8456009eb 264 PANTHER PTHR30477 1 259 9.1E-41 T 23-04-2016 RBRH_RS10110 ee961d38f01ba1cc945518d8456009eb 264 Pfam PF00950 ABC 3 transport family 4 257 1.3E-46 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 RBRH_RS10110 ee961d38f01ba1cc945518d8456009eb 264 Gene3D G3DSA:1.10.3470.10 31 255 8.6E-5 T 23-04-2016 IPR029022 ABC transporter, BtuC-like RBRH_RS10110 ee961d38f01ba1cc945518d8456009eb 264 SUPERFAMILY SSF81345 2 252 2.35E-31 T 23-04-2016 IPR029022 ABC transporter, BtuC-like RBRH_RS03455 099405be57f18d01d29d73488e19f84b 209 SUPERFAMILY SSF52833 51 207 2.81E-46 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS03455 099405be57f18d01d29d73488e19f84b 209 Gene3D G3DSA:3.40.30.10 23 207 1.2E-53 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS03455 099405be57f18d01d29d73488e19f84b 209 PANTHER PTHR12151 52 207 6.6E-48 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC RBRH_RS03455 099405be57f18d01d29d73488e19f84b 209 Pfam PF02630 SCO1/SenC 50 183 5.4E-37 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC RBRH_RS11810 289b4f093fde5782f8d74449431d78a1 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 2.1E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS11810 289b4f093fde5782f8d74449431d78a1 336 PANTHER PTHR30465:SF0 191 334 6.9E-147 T 23-04-2016 RBRH_RS11810 289b4f093fde5782f8d74449431d78a1 336 PANTHER PTHR30465:SF0 1 169 6.9E-147 T 23-04-2016 RBRH_RS11810 289b4f093fde5782f8d74449431d78a1 336 PANTHER PTHR30465 191 334 6.9E-147 T 23-04-2016 RBRH_RS11810 289b4f093fde5782f8d74449431d78a1 336 PANTHER PTHR30465 1 169 6.9E-147 T 23-04-2016 RBRH_RS11810 289b4f093fde5782f8d74449431d78a1 336 SUPERFAMILY SSF161098 91 160 1.44E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS11810 289b4f093fde5782f8d74449431d78a1 336 SUPERFAMILY SSF161098 197 320 1.44E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS11810 289b4f093fde5782f8d74449431d78a1 336 Gene3D G3DSA:1.10.3720.10 200 330 1.8E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS11810 289b4f093fde5782f8d74449431d78a1 336 Gene3D G3DSA:1.10.3720.10 90 163 1.8E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS02445 e55bc989897bdab7bd42c23639c476c8 365 PANTHER PTHR33529:SF2 1 362 1.0E-67 T 23-04-2016 RBRH_RS02445 e55bc989897bdab7bd42c23639c476c8 365 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 345 5.3E-120 T 23-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 RBRH_RS02445 e55bc989897bdab7bd42c23639c476c8 365 PANTHER PTHR33529 1 362 1.0E-67 T 23-04-2016 RBRH_RS02445 e55bc989897bdab7bd42c23639c476c8 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 345 1.6E-62 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RBRH_RS00225 a24dd83b7595ee7c8c6463433d7a008b 291 Gene3D G3DSA:3.40.50.2300 166 283 3.8E-8 T 23-04-2016 RBRH_RS00225 a24dd83b7595ee7c8c6463433d7a008b 291 SUPERFAMILY SSF52172 166 285 5.27E-9 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS00225 a24dd83b7595ee7c8c6463433d7a008b 291 Pfam PF08667 BetR domain 12 155 1.4E-36 T 23-04-2016 IPR013975 Transcription regulator BetR, N-terminal RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 PANTHER PTHR11963 14 505 1.3E-206 T 23-04-2016 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 SUPERFAMILY SSF53187 189 503 8.48E-126 T 23-04-2016 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 Gene3D G3DSA:3.40.630.10 183 503 5.7E-140 T 23-04-2016 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 27 155 5.1E-26 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 357 364 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 Gene3D G3DSA:3.40.220.10 1 171 5.4E-51 T 23-04-2016 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 11 505 38.188 T 23-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 SUPERFAMILY SSF52949 21 194 1.82E-38 T 23-04-2016 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 PRINTS PR00481 Cytosol aminopeptidase signature 353 373 6.6E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 PRINTS PR00481 Cytosol aminopeptidase signature 331 352 6.6E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 PRINTS PR00481 Cytosol aminopeptidase signature 381 396 6.6E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 PRINTS PR00481 Cytosol aminopeptidase signature 294 315 6.6E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 PRINTS PR00481 Cytosol aminopeptidase signature 272 289 6.6E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 PANTHER PTHR11963:SF13 14 505 1.3E-206 T 23-04-2016 RBRH_RS02450 bdc00f7572e0bd05d964adc4c0a431c3 505 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 196 496 2.2E-121 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RBRH_RS04700 fafad5c52e977bf6212d5f6f0e413bfd 281 Gene3D G3DSA:3.40.50.300 7 243 2.0E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04700 fafad5c52e977bf6212d5f6f0e413bfd 281 SMART SM00382 39 228 3.0E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS04700 fafad5c52e977bf6212d5f6f0e413bfd 281 SUPERFAMILY SSF52540 13 242 1.18E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS04700 fafad5c52e977bf6212d5f6f0e413bfd 281 PANTHER PTHR24220 15 262 5.5E-133 T 23-04-2016 RBRH_RS04700 fafad5c52e977bf6212d5f6f0e413bfd 281 PANTHER PTHR24220:SF368 15 262 5.5E-133 T 23-04-2016 RBRH_RS04700 fafad5c52e977bf6212d5f6f0e413bfd 281 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS04700 fafad5c52e977bf6212d5f6f0e413bfd 281 Pfam PF00005 ABC transporter 30 179 6.7E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS05765 e6813eb04c3dafa5e8b776e1346cc0e6 258 Gene3D G3DSA:3.30.420.10 4 215 3.5E-31 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS05765 e6813eb04c3dafa5e8b776e1346cc0e6 258 SUPERFAMILY SSF53098 3 227 1.14E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS05765 e6813eb04c3dafa5e8b776e1346cc0e6 258 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 254 4.6E-93 T 23-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like RBRH_RS00455 9ef586b34c7733b41f083391a1f8f90b 73 Pfam PF12512 Protein of unknown function (DUF3717) 3 68 6.7E-30 T 23-04-2016 IPR022191 Protein of unknown function DUF3717 RBRH_RS05340 81df20d3190b1573096df46eb925ee19 212 SUPERFAMILY SSF109604 21 212 4.89E-57 T 23-04-2016 RBRH_RS05340 81df20d3190b1573096df46eb925ee19 212 SMART SM00471 24 141 8.7E-8 T 23-04-2016 IPR003607 HD/PDEase domain RBRH_RS05340 81df20d3190b1573096df46eb925ee19 212 PANTHER PTHR33594 21 212 9.4E-46 T 23-04-2016 RBRH_RS05340 81df20d3190b1573096df46eb925ee19 212 PANTHER PTHR33594:SF1 21 212 9.4E-46 T 23-04-2016 RBRH_RS05340 81df20d3190b1573096df46eb925ee19 212 Pfam PF01966 HD domain 31 131 1.8E-11 T 23-04-2016 IPR006674 HD domain RBRH_RS05340 81df20d3190b1573096df46eb925ee19 212 Gene3D G3DSA:1.10.3210.10 184 212 1.6E-42 T 23-04-2016 IPR006674 HD domain RBRH_RS05340 81df20d3190b1573096df46eb925ee19 212 Gene3D G3DSA:1.10.3210.10 15 145 1.6E-42 T 23-04-2016 IPR006674 HD domain RBRH_RS05545 b26afb7544248058005c7c5739c09c79 346 PANTHER PTHR30465 1 341 2.2E-177 T 23-04-2016 RBRH_RS05545 b26afb7544248058005c7c5739c09c79 346 SUPERFAMILY SSF161098 106 323 4.71E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS05545 b26afb7544248058005c7c5739c09c79 346 PANTHER PTHR30465:SF66 1 341 2.2E-177 T 23-04-2016 RBRH_RS05545 b26afb7544248058005c7c5739c09c79 346 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 339 3.2E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS05545 b26afb7544248058005c7c5739c09c79 346 Gene3D G3DSA:1.10.3720.10 107 330 1.6E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS00655 9d397c12d1489a883e2484ba0d5dcdfb 347 Gene3D G3DSA:1.10.150.130 78 165 1.4E-4 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal RBRH_RS00655 9d397c12d1489a883e2484ba0d5dcdfb 347 PANTHER PTHR30349:SF20 69 115 6.4E-40 T 23-04-2016 RBRH_RS00655 9d397c12d1489a883e2484ba0d5dcdfb 347 PANTHER PTHR30349:SF20 132 342 6.4E-40 T 23-04-2016 RBRH_RS00655 9d397c12d1489a883e2484ba0d5dcdfb 347 SUPERFAMILY SSF56349 61 343 5.3E-48 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RBRH_RS00655 9d397c12d1489a883e2484ba0d5dcdfb 347 PANTHER PTHR30349 69 115 6.4E-40 T 23-04-2016 RBRH_RS00655 9d397c12d1489a883e2484ba0d5dcdfb 347 PANTHER PTHR30349 132 342 6.4E-40 T 23-04-2016 RBRH_RS00655 9d397c12d1489a883e2484ba0d5dcdfb 347 Gene3D G3DSA:1.10.443.10 172 343 3.1E-37 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS00655 9d397c12d1489a883e2484ba0d5dcdfb 347 Pfam PF00589 Phage integrase family 176 336 2.5E-35 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS01065 7549aee0fb2ae0cfa13b59c9e3227ea8 295 Pfam PF00535 Glycosyl transferase family 2 11 121 2.0E-20 T 23-04-2016 IPR001173 Glycosyltransferase 2-like RBRH_RS01065 7549aee0fb2ae0cfa13b59c9e3227ea8 295 Gene3D G3DSA:3.90.550.10 9 237 7.7E-33 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS01065 7549aee0fb2ae0cfa13b59c9e3227ea8 295 SUPERFAMILY SSF53448 8 213 6.38E-41 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS01065 7549aee0fb2ae0cfa13b59c9e3227ea8 295 PANTHER PTHR22916 1 286 1.8E-33 T 23-04-2016 RBRH_RS07255 6f18c3867a611c93ab0a7d8aa43acc47 139 SUPERFAMILY SSF88723 1 115 5.89E-14 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS07255 6f18c3867a611c93ab0a7d8aa43acc47 139 PANTHER PTHR34610 1 112 1.8E-18 T 23-04-2016 RBRH_RS07255 6f18c3867a611c93ab0a7d8aa43acc47 139 SMART SM00670 1 117 2.5E-8 T 23-04-2016 IPR002716 PIN domain RBRH_RS07255 6f18c3867a611c93ab0a7d8aa43acc47 139 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 2 112 6.7E-12 T 23-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component RBRH_RS07255 6f18c3867a611c93ab0a7d8aa43acc47 139 PANTHER PTHR34610:SF3 1 112 1.8E-18 T 23-04-2016 RBRH_RS07255 6f18c3867a611c93ab0a7d8aa43acc47 139 Pfam PF13470 PIN domain 2 113 1.3E-15 T 23-04-2016 IPR002716 PIN domain RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 SUPERFAMILY SSF52402 20 227 8.16E-62 T 23-04-2016 RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 Gene3D G3DSA:3.40.50.620 12 228 1.2E-50 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 Gene3D G3DSA:3.40.50.620 261 269 1.2E-50 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 PANTHER PTHR23293 1 176 3.5E-68 T 23-04-2016 RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 PANTHER PTHR23293 262 320 3.5E-68 T 23-04-2016 RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 PANTHER PTHR23293 196 229 3.5E-68 T 23-04-2016 RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 44 273 3.3E-44 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 PIRSF PIRSF002936 14 320 2.5E-136 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 PANTHER PTHR23293:SF6 1 176 3.5E-68 T 23-04-2016 RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 PANTHER PTHR23293:SF6 262 320 3.5E-68 T 23-04-2016 RBRH_RS02415 1239258cbe4678d952be685de74ade32 320 PANTHER PTHR23293:SF6 196 229 3.5E-68 T 23-04-2016 RBRH_RS10940 28ba23ba405bc5d891d4302e7b2e0d3d 464 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 173 191 1.3E-6 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RBRH_RS10940 28ba23ba405bc5d891d4302e7b2e0d3d 464 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 105 118 1.3E-6 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RBRH_RS10940 28ba23ba405bc5d891d4302e7b2e0d3d 464 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 231 244 1.3E-6 T 23-04-2016 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RBRH_RS10940 28ba23ba405bc5d891d4302e7b2e0d3d 464 PANTHER PTHR19446 64 355 2.2E-59 T 23-04-2016 RBRH_RS10940 28ba23ba405bc5d891d4302e7b2e0d3d 464 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 110 316 1.0E-41 T 23-04-2016 IPR000477 Reverse transcriptase domain RBRH_RS10940 28ba23ba405bc5d891d4302e7b2e0d3d 464 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 54 396 7.3E-125 T 23-04-2016 IPR030931 Group II intron reverse transcriptase/maturase RBRH_RS10940 28ba23ba405bc5d891d4302e7b2e0d3d 464 PANTHER PTHR19446:SF107 64 355 2.2E-59 T 23-04-2016 RBRH_RS10940 28ba23ba405bc5d891d4302e7b2e0d3d 464 Pfam PF08388 Group II intron, maturase-specific domain 332 408 2.8E-21 T 23-04-2016 IPR013597 Group II intron, maturase-specific RBRH_RS10940 28ba23ba405bc5d891d4302e7b2e0d3d 464 SUPERFAMILY SSF56672 61 404 2.35E-51 T 23-04-2016 RBRH_RS02380 72dfb1a20a258d46ad36fe90fe35c933 233 Gene3D G3DSA:3.10.290.10 3 63 1.2E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS02380 72dfb1a20a258d46ad36fe90fe35c933 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RBRH_RS02380 72dfb1a20a258d46ad36fe90fe35c933 233 SUPERFAMILY SSF55120 61 228 7.36E-43 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS02380 72dfb1a20a258d46ad36fe90fe35c933 233 PANTHER PTHR21600 1 231 2.2E-48 T 23-04-2016 RBRH_RS02380 72dfb1a20a258d46ad36fe90fe35c933 233 Pfam PF00849 RNA pseudouridylate synthase 62 193 2.2E-16 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS02380 72dfb1a20a258d46ad36fe90fe35c933 233 SMART SM00363 1 61 0.0022 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS02380 72dfb1a20a258d46ad36fe90fe35c933 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 8.1E-39 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RBRH_RS02380 72dfb1a20a258d46ad36fe90fe35c933 233 SUPERFAMILY SSF55174 1 67 5.15E-9 T 23-04-2016 RBRH_RS02380 72dfb1a20a258d46ad36fe90fe35c933 233 Pfam PF01479 S4 domain 2 37 2.6E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RBRH_RS10595 b70e823a6589d40ebeb9b90cde52da5e 149 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 11 146 6.4E-34 T 23-04-2016 IPR011747 Conserved hypothetical protein CHP02241 RBRH_RS10595 b70e823a6589d40ebeb9b90cde52da5e 149 Pfam PF06841 T4-like virus tail tube protein gp19 16 144 6.2E-34 T 23-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 RBRH_RS06860 5b3fa5872b83265dc8585bdc8903aac0 103 Gene3D G3DSA:1.10.260.40 1 89 2.0E-31 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS06860 5b3fa5872b83265dc8585bdc8903aac0 103 Pfam PF01381 Helix-turn-helix 18 59 1.7E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RBRH_RS06860 5b3fa5872b83265dc8585bdc8903aac0 103 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 2 82 2.4E-30 T 23-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 RBRH_RS06860 5b3fa5872b83265dc8585bdc8903aac0 103 PANTHER PTHR36924:SF2 1 85 2.2E-21 T 23-04-2016 RBRH_RS06860 5b3fa5872b83265dc8585bdc8903aac0 103 SUPERFAMILY SSF47413 7 87 2.09E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS06860 5b3fa5872b83265dc8585bdc8903aac0 103 PANTHER PTHR36924 1 85 2.2E-21 T 23-04-2016 RBRH_RS12170 8391b7f97131d9cb51f71afc9ad21ea8 217 Pfam PF03783 Curli production assembly/transport component CsgG 31 210 4.6E-32 T 23-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 RBRH_RS12170 8391b7f97131d9cb51f71afc9ad21ea8 217 PANTHER PTHR41164:SF1 1 212 2.6E-55 T 23-04-2016 RBRH_RS12170 8391b7f97131d9cb51f71afc9ad21ea8 217 PANTHER PTHR41164 1 212 2.6E-55 T 23-04-2016 RBRH_RS12170 8391b7f97131d9cb51f71afc9ad21ea8 217 SUPERFAMILY SSF52964 37 137 1.83E-7 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RBRH_RS12170 8391b7f97131d9cb51f71afc9ad21ea8 217 Gene3D G3DSA:3.40.50.10070 37 123 3.2E-4 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 SUPERFAMILY SSF81464 41 133 2.45E-28 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 Gene3D G3DSA:2.60.40.420 131 305 2.2E-52 T 23-04-2016 IPR008972 Cupredoxin RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 SUPERFAMILY SSF46626 244 375 4.03E-24 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 299 369 6.5E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 43 124 5.2E-17 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 PANTHER PTHR22888 45 318 6.9E-95 T 23-04-2016 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 PANTHER PTHR22888:SF2 45 318 6.9E-95 T 23-04-2016 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 SUPERFAMILY SSF49503 136 279 1.05E-48 T 23-04-2016 IPR008972 Cupredoxin RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 Gene3D G3DSA:1.10.287.90 43 130 1.2E-27 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 PRINTS PR01166 Cytochrome c oxidase subunit II signature 101 113 9.3E-35 T 23-04-2016 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 PRINTS PR01166 Cytochrome c oxidase subunit II signature 247 264 9.3E-35 T 23-04-2016 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 PRINTS PR01166 Cytochrome c oxidase subunit II signature 185 206 9.3E-35 T 23-04-2016 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 PRINTS PR01166 Cytochrome c oxidase subunit II signature 135 154 9.3E-35 T 23-04-2016 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 PRINTS PR01166 Cytochrome c oxidase subunit II signature 209 229 9.3E-35 T 23-04-2016 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 PRINTS PR01166 Cytochrome c oxidase subunit II signature 113 133 9.3E-35 T 23-04-2016 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 Gene3D G3DSA:1.10.760.10 306 378 5.7E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 52 274 1.5E-54 T 23-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 139 263 2.6E-32 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RBRH_RS11220 693367c751eeb8e112093c7a88b66a60 394 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 210 258 - T 23-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 RBRH_RS04050 172e0725241f912a6a9bec66f2bdc652 141 Gene3D G3DSA:1.10.530.40 10 139 4.6E-31 T 23-04-2016 IPR023347 Lysozyme domain GO:0003796 RBRH_RS04050 172e0725241f912a6a9bec66f2bdc652 141 SUPERFAMILY SSF53955 9 139 3.84E-33 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS04050 172e0725241f912a6a9bec66f2bdc652 141 Pfam PF00959 Phage lysozyme 33 129 6.4E-6 T 23-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 RBRH_RS04050 172e0725241f912a6a9bec66f2bdc652 141 PANTHER PTHR37406 5 139 2.4E-17 T 23-04-2016 RBRH_RS06405 6d1dae27a11478512fff5514b72a50ce 407 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 261 389 7.0E-5 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RBRH_RS06405 6d1dae27a11478512fff5514b72a50ce 407 SUPERFAMILY SSF64383 257 389 3.4E-24 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RBRH_RS06405 6d1dae27a11478512fff5514b72a50ce 407 Gene3D G3DSA:3.30.1400.10 256 389 4.1E-27 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RBRH_RS06405 6d1dae27a11478512fff5514b72a50ce 407 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 262 379 6.9E-10 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RBRH_RS06405 6d1dae27a11478512fff5514b72a50ce 407 SMART SM00771 257 382 1.6E-19 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RBRH_RS10165 548c9366fbce2ffa19d3949134537648 363 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 48 350 2.7E-8 T 23-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 RBRH_RS10165 548c9366fbce2ffa19d3949134537648 363 PANTHER PTHR22835:SF222 47 352 9.2E-21 T 23-04-2016 RBRH_RS10165 548c9366fbce2ffa19d3949134537648 363 PANTHER PTHR22835 47 352 9.2E-21 T 23-04-2016 RBRH_RS10165 548c9366fbce2ffa19d3949134537648 363 SUPERFAMILY SSF52266 47 275 9.58E-12 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RBRH_RS10165 548c9366fbce2ffa19d3949134537648 363 SUPERFAMILY SSF52266 322 357 9.58E-12 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RBRH_RS10165 548c9366fbce2ffa19d3949134537648 363 Gene3D G3DSA:3.40.50.1110 47 360 1.7E-62 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain RBRH_RS02640 d0fdf2170026f8463c9880602a46277f 559 Pfam PF02540 NAD synthase 279 532 1.6E-71 T 23-04-2016 IPR022310 NAD/GMP synthase RBRH_RS02640 d0fdf2170026f8463c9880602a46277f 559 PIRSF PIRSF006630 1 559 3.5E-197 T 23-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 RBRH_RS02640 d0fdf2170026f8463c9880602a46277f 559 SUPERFAMILY SSF52402 275 540 4.89E-78 T 23-04-2016 RBRH_RS02640 d0fdf2170026f8463c9880602a46277f 559 PANTHER PTHR23090 1 91 2.4E-157 T 23-04-2016 RBRH_RS02640 d0fdf2170026f8463c9880602a46277f 559 PANTHER PTHR23090 109 553 2.4E-157 T 23-04-2016 RBRH_RS02640 d0fdf2170026f8463c9880602a46277f 559 TIGRFAM TIGR00552 nadE: NAD+ synthetase 286 536 1.3E-58 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 RBRH_RS02640 d0fdf2170026f8463c9880602a46277f 559 Gene3D G3DSA:3.40.50.620 274 539 1.4E-78 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RBRH_RS02640 d0fdf2170026f8463c9880602a46277f 559 Pfam PF00795 Carbon-nitrogen hydrolase 2 263 1.1E-28 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RBRH_RS02640 d0fdf2170026f8463c9880602a46277f 559 Gene3D G3DSA:3.60.110.10 1 264 2.4E-65 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RBRH_RS02640 d0fdf2170026f8463c9880602a46277f 559 SUPERFAMILY SSF56317 1 261 1.16E-60 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RBRH_RS01365 a9b3f94de8363c27b1626c161bcef953 204 Pfam PF01121 Dephospho-CoA kinase 4 179 1.3E-63 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RBRH_RS01365 a9b3f94de8363c27b1626c161bcef953 204 PANTHER PTHR10695 1 195 1.4E-62 T 23-04-2016 RBRH_RS01365 a9b3f94de8363c27b1626c161bcef953 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 186 8.0E-52 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RBRH_RS01365 a9b3f94de8363c27b1626c161bcef953 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 193 27.226 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RBRH_RS01365 a9b3f94de8363c27b1626c161bcef953 204 Gene3D G3DSA:3.40.50.300 1 196 1.4E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01365 a9b3f94de8363c27b1626c161bcef953 204 SUPERFAMILY SSF52540 1 191 1.81E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03095 dd2afa1ac0303d0a4aeb36a5f00b47b1 224 Pfam PF00293 NUDIX domain 58 141 4.6E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RBRH_RS03095 dd2afa1ac0303d0a4aeb36a5f00b47b1 224 SUPERFAMILY SSF55811 48 215 1.03E-34 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS03095 dd2afa1ac0303d0a4aeb36a5f00b47b1 224 Gene3D G3DSA:3.90.79.10 46 222 3.7E-41 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS03095 dd2afa1ac0303d0a4aeb36a5f00b47b1 224 PANTHER PTHR12992 6 223 4.4E-51 T 23-04-2016 RBRH_RS15950 3361ac7da69c5748d6c1f268c03c1d3d 114 PANTHER PTHR11615:SF119 2 106 1.1E-24 T 23-04-2016 RBRH_RS15950 3361ac7da69c5748d6c1f268c03c1d3d 114 PANTHER PTHR11615 2 106 1.1E-24 T 23-04-2016 RBRH_RS15950 3361ac7da69c5748d6c1f268c03c1d3d 114 SUPERFAMILY SSF53706 2 95 5.57E-20 T 23-04-2016 RBRH_RS15950 3361ac7da69c5748d6c1f268c03c1d3d 114 Gene3D G3DSA:3.40.50.740 2 79 1.7E-15 T 23-04-2016 RBRH_RS00090 1a7cd21c33c3648420b3df2e82c260be 1621 SMART SM00320 1576 1615 2.1 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 RBRH_RS00090 1a7cd21c33c3648420b3df2e82c260be 1621 SMART SM00320 1534 1570 43.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 RBRH_RS00090 1a7cd21c33c3648420b3df2e82c260be 1621 SMART SM00320 1397 1436 22.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 RBRH_RS00090 1a7cd21c33c3648420b3df2e82c260be 1621 SUPERFAMILY SSF50978 1488 1615 2.33E-15 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RBRH_RS00090 1a7cd21c33c3648420b3df2e82c260be 1621 SUPERFAMILY SSF50978 1322 1439 2.33E-15 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RBRH_RS00090 1a7cd21c33c3648420b3df2e82c260be 1621 Gene3D G3DSA:2.130.10.10 1336 1376 4.1E-14 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RBRH_RS00090 1a7cd21c33c3648420b3df2e82c260be 1621 Gene3D G3DSA:2.130.10.10 1411 1616 4.1E-14 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RBRH_RS08235 4affc35f1e4f655395bc68108739287e 417 Pfam PF12704 MacB-like periplasmic core domain 30 245 3.2E-22 T 23-04-2016 IPR025857 MacB-like periplasmic core domain RBRH_RS08235 4affc35f1e4f655395bc68108739287e 417 Pfam PF02687 FtsX-like permease family 277 409 1.4E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RBRH_RS08235 4affc35f1e4f655395bc68108739287e 417 PANTHER PTHR30489 9 417 2.9E-96 T 23-04-2016 RBRH_RS08235 4affc35f1e4f655395bc68108739287e 417 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 417 3.4E-143 T 23-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 RBRH_RS08235 4affc35f1e4f655395bc68108739287e 417 PANTHER PTHR30489:SF8 9 417 2.9E-96 T 23-04-2016 RBRH_RS07940 9937e0679e4a5eed430eaa2713d42936 164 Pfam PF05974 Domain of unknown function (DUF892) 5 161 1.1E-62 T 23-04-2016 IPR010287 Domain of unknown function DUF892 RBRH_RS07940 9937e0679e4a5eed430eaa2713d42936 164 Gene3D G3DSA:1.20.1260.10 1 162 2.0E-70 T 23-04-2016 IPR012347 Ferritin-related RBRH_RS07940 9937e0679e4a5eed430eaa2713d42936 164 PANTHER PTHR30565 1 164 6.3E-69 T 23-04-2016 RBRH_RS07940 9937e0679e4a5eed430eaa2713d42936 164 SUPERFAMILY SSF47240 1 154 4.64E-57 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 Pfam PF09129 Cholesterol oxidase, substrate-binding 293 606 3.6E-154 T 23-04-2016 IPR015213 Cholesterol oxidase, substrate-binding RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 Gene3D G3DSA:3.40.462.10 260 292 8.1E-6 T 23-04-2016 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain KEGG: 00908+1.5.99.12 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 Gene3D G3DSA:3.40.462.10 293 555 2.3E-132 T 23-04-2016 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain KEGG: 00908+1.5.99.12 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 Gene3D G3DSA:3.30.465.10 136 258 8.7E-36 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 SUPERFAMILY SSF56176 48 257 1.54E-36 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 Gene3D G3DSA:1.10.45.10 556 606 2.1E-22 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 PANTHER PTHR13878 290 554 6.4E-15 T 23-04-2016 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 PANTHER PTHR13878 61 260 6.4E-15 T 23-04-2016 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 PANTHER PTHR13878 574 606 6.4E-15 T 23-04-2016 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 Pfam PF01565 FAD binding domain 77 195 2.7E-14 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 SUPERFAMILY SSF55103 294 606 2.88E-131 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 Gene3D G3DSA:3.30.43.10 57 129 1.5E-26 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RBRH_RS08875 5c5082ea7d7968741a50b46c185a8f5a 609 SUPERFAMILY SSF55103 261 292 7.19E-5 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RBRH_RS02535 778300cf38bf098ce9580c63c0d2888a 291 Pfam PF02616 Segregation and condensation protein ScpA 75 286 1.1E-32 T 23-04-2016 IPR003768 Segregation and condensation protein A RBRH_RS02535 778300cf38bf098ce9580c63c0d2888a 291 PANTHER PTHR33969 42 286 2.6E-74 T 23-04-2016 RBRH_RS02535 778300cf38bf098ce9580c63c0d2888a 291 PANTHER PTHR33969:SF2 42 286 2.6E-74 T 23-04-2016 RBRH_RS02535 778300cf38bf098ce9580c63c0d2888a 291 Hamap MF_01805 Segregation and condensation protein A [scpA]. 58 288 21.042 T 23-04-2016 IPR003768 Segregation and condensation protein A RBRH_RS05075 dfd3712cba18fce6372e9614969f1af5 223 SUPERFAMILY SSF51366 3 218 1.49E-74 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RBRH_RS05075 dfd3712cba18fce6372e9614969f1af5 223 PANTHER PTHR11749 1 221 6.6E-122 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RBRH_RS05075 dfd3712cba18fce6372e9614969f1af5 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 32 46 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RBRH_RS05075 dfd3712cba18fce6372e9614969f1af5 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 205 2.2E-89 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RBRH_RS05075 dfd3712cba18fce6372e9614969f1af5 223 PIRSF PIRSF001461 1 223 3.5E-103 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RBRH_RS05075 dfd3712cba18fce6372e9614969f1af5 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RBRH_RS05075 dfd3712cba18fce6372e9614969f1af5 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 218 4.7E-97 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RBRH_RS05075 dfd3712cba18fce6372e9614969f1af5 223 Gene3D G3DSA:3.20.20.70 3 221 1.9E-94 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 Pfam PF13361 UvrD-like helicase C-terminal domain 215 365 1.0E-32 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 Gene3D G3DSA:1.10.10.160 55 125 1.9E-15 T 23-04-2016 IPR013986 DExx box DNA helicase domain RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 Gene3D G3DSA:3.40.50.300 224 322 8.6E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 SUPERFAMILY SSF52540 23 425 6.38E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 PANTHER PTHR11070:SF19 26 428 4.6E-182 T 23-04-2016 RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 Pfam PF00580 UvrD/REP helicase N-terminal domain 23 60 3.3E-5 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 Pfam PF00580 UvrD/REP helicase N-terminal domain 71 209 5.8E-35 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 PANTHER PTHR11070 26 428 4.6E-182 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 Gene3D G3DSA:3.40.50.300 23 51 2.9E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 Gene3D G3DSA:3.40.50.300 126 223 2.9E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS12730 fd74142fde4681b21780429c4867e56d 428 Gene3D G3DSA:1.10.486.10 323 427 5.2E-29 T 23-04-2016 RBRH_RS11475 4d9451cb2b2c2b6f25430748925a78a7 215 SUPERFAMILY SSF52833 29 206 8.47E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11475 4d9451cb2b2c2b6f25430748925a78a7 215 Pfam PF01323 DSBA-like thioredoxin domain 101 186 5.5E-10 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RBRH_RS11475 4d9451cb2b2c2b6f25430748925a78a7 215 Gene3D G3DSA:3.40.30.10 27 207 1.7E-52 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11475 4d9451cb2b2c2b6f25430748925a78a7 215 PIRSF PIRSF001488 1 214 1.3E-43 T 23-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RBRH_RS11475 4d9451cb2b2c2b6f25430748925a78a7 215 PANTHER PTHR35891:SF2 5 214 1.4E-44 T 23-04-2016 RBRH_RS11475 4d9451cb2b2c2b6f25430748925a78a7 215 PANTHER PTHR35891 5 214 1.4E-44 T 23-04-2016 RBRH_RS04745 17ba6df7757880e19010144facf0f47c 438 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 46.893 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS04745 17ba6df7757880e19010144facf0f47c 438 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 414 2.1E-176 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RBRH_RS04745 17ba6df7757880e19010144facf0f47c 438 SUPERFAMILY SSF55205 1 416 5.72E-143 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RBRH_RS04745 17ba6df7757880e19010144facf0f47c 438 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 402 2.0E-108 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RBRH_RS04745 17ba6df7757880e19010144facf0f47c 438 Gene3D G3DSA:3.65.10.10 220 415 4.1E-60 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RBRH_RS04745 17ba6df7757880e19010144facf0f47c 438 Gene3D G3DSA:3.65.10.10 21 219 1.7E-70 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RBRH_RS04745 17ba6df7757880e19010144facf0f47c 438 PANTHER PTHR21090 1 419 1.6E-198 T 23-04-2016 RBRH_RS05380 05bad29e0d5282a47d520fd4b3a9a6ed 309 PANTHER PTHR10459:SF36 44 300 3.2E-23 T 23-04-2016 RBRH_RS05380 05bad29e0d5282a47d520fd4b3a9a6ed 309 PANTHER PTHR10459 44 300 3.2E-23 T 23-04-2016 RBRH_RS05380 05bad29e0d5282a47d520fd4b3a9a6ed 309 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 16 258 4.0E-87 T 23-04-2016 IPR014145 DNA ligase D, polymerase domain RBRH_RS11770 ec491a5384e9a3e7c3104297406aa724 246 PANTHER PTHR41293 2 242 9.6E-96 T 23-04-2016 RBRH_RS11770 ec491a5384e9a3e7c3104297406aa724 246 Pfam PF06149 Protein of unknown function (DUF969) 8 223 3.0E-87 T 23-04-2016 IPR010374 Protein of unknown function DUF969 RBRH_RS11770 ec491a5384e9a3e7c3104297406aa724 246 PANTHER PTHR41293:SF1 2 242 9.6E-96 T 23-04-2016 RBRH_RS00240 fcf11df1cc11bcf0b72689c73ae6103b 515 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 252 2.3E-37 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RBRH_RS00240 fcf11df1cc11bcf0b72689c73ae6103b 515 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 373 393 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RBRH_RS00240 fcf11df1cc11bcf0b72689c73ae6103b 515 Gene3D G3DSA:3.30.420.40 4 252 1.7E-57 T 23-04-2016 RBRH_RS00240 fcf11df1cc11bcf0b72689c73ae6103b 515 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 461 1.4E-32 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RBRH_RS00240 fcf11df1cc11bcf0b72689c73ae6103b 515 PIRSF PIRSF000538 5 511 1.3E-99 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RBRH_RS00240 fcf11df1cc11bcf0b72689c73ae6103b 515 PANTHER PTHR10196 1 514 2.7E-100 T 23-04-2016 RBRH_RS00240 fcf11df1cc11bcf0b72689c73ae6103b 515 SUPERFAMILY SSF53067 8 255 1.19E-57 T 23-04-2016 RBRH_RS00240 fcf11df1cc11bcf0b72689c73ae6103b 515 Gene3D G3DSA:3.30.420.40 254 503 4.5E-61 T 23-04-2016 RBRH_RS00240 fcf11df1cc11bcf0b72689c73ae6103b 515 SUPERFAMILY SSF53067 254 504 5.18E-51 T 23-04-2016 RBRH_RS06995 c2395b1045b3e103a522a158b641c5b0 362 PANTHER PTHR30518 7 360 7.5E-83 T 23-04-2016 RBRH_RS06995 c2395b1045b3e103a522a158b641c5b0 362 Pfam PF02618 YceG-like family 43 357 2.3E-82 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RBRH_RS06995 c2395b1045b3e103a522a158b641c5b0 362 Gene3D G3DSA:3.30.160.60 331 360 4.9E-15 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 RBRH_RS06995 c2395b1045b3e103a522a158b641c5b0 362 PANTHER PTHR30518:SF2 7 360 7.5E-83 T 23-04-2016 RBRH_RS06995 c2395b1045b3e103a522a158b641c5b0 362 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 186 360 2.4E-66 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RBRH_RS03310 219099d8ce59f593aa534ba0c342173e 329 Gene3D G3DSA:3.40.47.10 9 171 1.9E-61 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS03310 219099d8ce59f593aa534ba0c342173e 329 Gene3D G3DSA:3.40.47.10 172 328 1.2E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS03310 219099d8ce59f593aa534ba0c342173e 329 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 240 329 1.9E-36 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RBRH_RS03310 219099d8ce59f593aa534ba0c342173e 329 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 194 3.5E-33 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RBRH_RS03310 219099d8ce59f593aa534ba0c342173e 329 PANTHER PTHR18919:SF109 36 329 5.8E-126 T 23-04-2016 RBRH_RS03310 219099d8ce59f593aa534ba0c342173e 329 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 7 329 1.3E-117 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RBRH_RS03310 219099d8ce59f593aa534ba0c342173e 329 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 6 329 69.195 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RBRH_RS03310 219099d8ce59f593aa534ba0c342173e 329 SUPERFAMILY SSF53901 8 329 2.36E-73 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RBRH_RS03310 219099d8ce59f593aa534ba0c342173e 329 PANTHER PTHR18919 36 329 5.8E-126 T 23-04-2016 RBRH_RS02320 865be1e1eb602f2e4baea5c3a9e2b392 151 Gene3D G3DSA:3.10.50.40 137 150 1.7E-15 T 23-04-2016 RBRH_RS02320 865be1e1eb602f2e4baea5c3a9e2b392 151 Gene3D G3DSA:3.10.50.40 8 84 1.7E-15 T 23-04-2016 RBRH_RS02320 865be1e1eb602f2e4baea5c3a9e2b392 151 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 9 147 2.3E-11 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RBRH_RS02320 865be1e1eb602f2e4baea5c3a9e2b392 151 SUPERFAMILY SSF54534 9 150 5.89E-31 T 23-04-2016 RBRH_RS10915 129dec3a24bf4ef83f6ab065efdaa00f 175 Gene3D G3DSA:1.10.10.10 7 92 4.5E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10915 129dec3a24bf4ef83f6ab065efdaa00f 175 SUPERFAMILY SSF46785 9 92 4.91E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS07355 fe828328203b7e43ef71ec5418e21275 288 Gene3D G3DSA:3.40.50.150 49 286 1.4E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07355 fe828328203b7e43ef71ec5418e21275 288 SUPERFAMILY SSF53335 9 227 1.29E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS07355 fe828328203b7e43ef71ec5418e21275 288 PANTHER PTHR10108 15 174 4.3E-41 T 23-04-2016 RBRH_RS07355 fe828328203b7e43ef71ec5418e21275 288 Pfam PF08241 Methyltransferase domain 74 168 3.1E-19 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RBRH_RS07355 fe828328203b7e43ef71ec5418e21275 288 PANTHER PTHR10108:SF884 15 174 4.3E-41 T 23-04-2016 RBRH_RS10860 1a41dacc9f1a51db0095135bd259268f 138 Pfam PF06155 Protein of unknown function (DUF971) 15 98 5.0E-29 T 23-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 RBRH_RS10860 1a41dacc9f1a51db0095135bd259268f 138 PANTHER PTHR35303:SF1 8 123 1.1E-45 T 23-04-2016 RBRH_RS10860 1a41dacc9f1a51db0095135bd259268f 138 PANTHER PTHR35303 8 123 1.1E-45 T 23-04-2016 RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 SUPERFAMILY SSF46785 265 339 3.81E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 Gene3D G3DSA:1.10.10.10 266 336 3.6E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 262 337 9.0E-36 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 262 335 2.2E-33 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 PANTHER PTHR13779:SF25 3 340 3.0E-183 T 23-04-2016 RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 18 244 3.9E-118 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 Gene3D G3DSA:3.40.50.300 29 185 1.4E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 353 183.397 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 33 335 2.1E-146 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 PANTHER PTHR13779 3 340 3.0E-183 T 23-04-2016 RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 SMART SM00382 60 187 2.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 SUPERFAMILY SSF52540 29 259 8.91E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10670 1b7a5c14ca2d60011db827b1c89c2dbb 353 Gene3D G3DSA:1.10.8.60 193 263 1.2E-33 T 23-04-2016 RBRH_RS08830 e04eff4672275cee9768f4447392a959 122 PIRSF PIRSF000169 8 122 5.5E-38 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RBRH_RS08830 e04eff4672275cee9768f4447392a959 122 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 120 1.2E-36 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RBRH_RS08830 e04eff4672275cee9768f4447392a959 122 SUPERFAMILY SSF81343 11 122 6.32E-30 T 23-04-2016 RBRH_RS08830 e04eff4672275cee9768f4447392a959 122 PANTHER PTHR38689 19 122 2.0E-25 T 23-04-2016 RBRH_RS08830 e04eff4672275cee9768f4447392a959 122 Gene3D G3DSA:1.20.1300.10 10 122 3.8E-35 T 23-04-2016 RBRH_RS08830 e04eff4672275cee9768f4447392a959 122 PANTHER PTHR38689:SF1 19 122 2.0E-25 T 23-04-2016 RBRH_RS08830 e04eff4672275cee9768f4447392a959 122 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 110 1.4E-13 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RBRH_RS08510 f59325bd6eec1323a2bac020bdeea9bf 100 PANTHER PTHR35893 1 100 1.4E-24 T 23-04-2016 RBRH_RS08510 f59325bd6eec1323a2bac020bdeea9bf 100 PANTHER PTHR35893:SF3 1 100 1.4E-24 T 23-04-2016 RBRH_RS08510 f59325bd6eec1323a2bac020bdeea9bf 100 Pfam PF05957 Bacterial protein of unknown function (DUF883) 8 100 4.5E-33 T 23-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RBRH_RS03160 da4884d299d92f4a4d99879db65c5254 468 TIGRFAM TIGR00797 matE: MATE efflux family protein 33 437 1.3E-71 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS03160 da4884d299d92f4a4d99879db65c5254 468 Pfam PF01554 MatE 258 424 1.6E-28 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS03160 da4884d299d92f4a4d99879db65c5254 468 Pfam PF01554 MatE 33 192 1.3E-18 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS03160 da4884d299d92f4a4d99879db65c5254 468 PANTHER PTHR11206:SF153 23 461 2.7E-90 T 23-04-2016 RBRH_RS03160 da4884d299d92f4a4d99879db65c5254 468 PIRSF PIRSF006603 25 464 8.6E-64 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS03160 da4884d299d92f4a4d99879db65c5254 468 PANTHER PTHR11206 23 461 2.7E-90 T 23-04-2016 RBRH_RS09935 11527919d048902eacba362ab961d110 312 SUPERFAMILY SSF51735 13 302 1.01E-94 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09935 11527919d048902eacba362ab961d110 312 PANTHER PTHR10491:SF4 5 307 9.0E-94 T 23-04-2016 RBRH_RS09935 11527919d048902eacba362ab961d110 312 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 13 302 4.9E-99 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RBRH_RS09935 11527919d048902eacba362ab961d110 312 Gene3D G3DSA:3.40.50.720 8 177 1.0E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09935 11527919d048902eacba362ab961d110 312 Gene3D G3DSA:3.90.25.10 235 293 8.0E-27 T 23-04-2016 RBRH_RS09935 11527919d048902eacba362ab961d110 312 Gene3D G3DSA:3.90.25.10 178 191 8.0E-27 T 23-04-2016 RBRH_RS09935 11527919d048902eacba362ab961d110 312 Pfam PF04321 RmlD substrate binding domain 13 302 4.2E-106 T 23-04-2016 IPR029903 RmlD-like substrate binding domain RBRH_RS09935 11527919d048902eacba362ab961d110 312 PANTHER PTHR10491 5 307 9.0E-94 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RBRH_RS10825 d9856c956ad3189ffea47e6f393255b1 220 PANTHER PTHR31876 8 219 3.0E-58 T 23-04-2016 RBRH_RS10825 d9856c956ad3189ffea47e6f393255b1 220 Pfam PF04367 Protein of unknown function (DUF502) 63 168 2.0E-35 T 23-04-2016 IPR007462 Protein of unknown function DUF502 RBRH_RS02440 8680b9ee70f9f434a5bca8d4db910823 382 PANTHER PTHR33529:SF1 1 381 3.3E-71 T 23-04-2016 RBRH_RS02440 8680b9ee70f9f434a5bca8d4db910823 382 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 378 1.1E-103 T 23-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 RBRH_RS02440 8680b9ee70f9f434a5bca8d4db910823 382 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 376 3.8E-70 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RBRH_RS02440 8680b9ee70f9f434a5bca8d4db910823 382 PANTHER PTHR33529 1 381 3.3E-71 T 23-04-2016 RBRH_RS01170 99a2298802d7286216ea00bb64440c40 180 Pfam PF01883 Domain of unknown function DUF59 14 86 4.4E-9 T 23-04-2016 IPR002744 Domain of unknown function DUF59 RBRH_RS01170 99a2298802d7286216ea00bb64440c40 180 SUPERFAMILY SSF117916 12 105 1.7E-20 T 23-04-2016 RBRH_RS01170 99a2298802d7286216ea00bb64440c40 180 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 21 179 1.6E-55 T 23-04-2016 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit UniPathway: UPA00930 RBRH_RS00285 4bd0ff6afe64bb73a3c67a10712a5828 150 PANTHER PTHR36302:SF1 7 139 6.0E-22 T 23-04-2016 RBRH_RS00285 4bd0ff6afe64bb73a3c67a10712a5828 150 Pfam PF04314 Protein of unknown function (DUF461) 31 138 1.4E-28 T 23-04-2016 IPR007410 DR1885-like metal-binding protein RBRH_RS00285 4bd0ff6afe64bb73a3c67a10712a5828 150 SUPERFAMILY SSF110087 8 144 3.79E-37 T 23-04-2016 IPR007410 DR1885-like metal-binding protein RBRH_RS00285 4bd0ff6afe64bb73a3c67a10712a5828 150 PANTHER PTHR36302 7 139 6.0E-22 T 23-04-2016 RBRH_RS09505 4aa15f3330e8bf93d5485cbe8838500c 193 PANTHER PTHR38683 33 188 3.4E-20 T 23-04-2016 RBRH_RS09505 4aa15f3330e8bf93d5485cbe8838500c 193 Pfam PF04345 Chorismate lyase 29 189 2.2E-18 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 RBRH_RS09505 4aa15f3330e8bf93d5485cbe8838500c 193 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 18 190 21.712 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 RBRH_RS09505 4aa15f3330e8bf93d5485cbe8838500c 193 SUPERFAMILY SSF64288 19 188 6.0E-38 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RBRH_RS09505 4aa15f3330e8bf93d5485cbe8838500c 193 Gene3D G3DSA:3.40.1410.10 18 188 2.2E-44 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RBRH_RS09950 0657ee9afb468afb6d1ae23502c3fb9d 359 Gene3D G3DSA:3.40.50.720 2 190 4.3E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09950 0657ee9afb468afb6d1ae23502c3fb9d 359 SUPERFAMILY SSF51735 2 349 7.27E-89 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09950 0657ee9afb468afb6d1ae23502c3fb9d 359 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 322 2.5E-95 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS09950 0657ee9afb468afb6d1ae23502c3fb9d 359 PANTHER PTHR10366 1 349 2.6E-158 T 23-04-2016 RBRH_RS09950 0657ee9afb468afb6d1ae23502c3fb9d 359 Gene3D G3DSA:3.90.25.10 191 344 6.0E-55 T 23-04-2016 RBRH_RS09950 0657ee9afb468afb6d1ae23502c3fb9d 359 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 335 8.5E-149 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RBRH_RS09950 0657ee9afb468afb6d1ae23502c3fb9d 359 PANTHER PTHR10366:SF437 1 349 2.6E-158 T 23-04-2016 RBRH_RS07010 183c12ddaa417acb455c1bfb704ca5a7 75 Pfam PF05509 TraY domain 4 48 1.1E-6 T 23-04-2016 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 RBRH_RS07010 183c12ddaa417acb455c1bfb704ca5a7 75 SUPERFAMILY SSF47598 3 42 1.22E-10 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RBRH_RS00845 50380927b61d24595faa3c1f63f749e4 146 PANTHER PTHR34235:SF3 3 146 1.8E-49 T 23-04-2016 RBRH_RS00845 50380927b61d24595faa3c1f63f749e4 146 PANTHER PTHR34235 3 146 1.8E-49 T 23-04-2016 RBRH_RS00845 50380927b61d24595faa3c1f63f749e4 146 Pfam PF01724 Domain of unknown function DUF29 5 141 1.1E-47 T 23-04-2016 IPR002636 Protein from unkown function DUF29 RBRH_RS05940 8d91fd53cf402c081cd767763b4d989a 279 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 72 277 1.4E-63 T 23-04-2016 RBRH_RS05940 8d91fd53cf402c081cd767763b4d989a 279 PANTHER PTHR10000 72 277 2.6E-72 T 23-04-2016 RBRH_RS05940 8d91fd53cf402c081cd767763b4d989a 279 Pfam PF12710 haloacid dehalogenase-like hydrolase 75 243 5.2E-17 T 23-04-2016 RBRH_RS05940 8d91fd53cf402c081cd767763b4d989a 279 Pfam PF13284 Domain of unknown function (DUF4072) 3 49 7.2E-16 T 23-04-2016 IPR025138 Domain of unknown function DUF4072 RBRH_RS05940 8d91fd53cf402c081cd767763b4d989a 279 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 73 245 1.3E-28 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RBRH_RS05940 8d91fd53cf402c081cd767763b4d989a 279 PANTHER PTHR10000:SF7 72 277 2.6E-72 T 23-04-2016 RBRH_RS05940 8d91fd53cf402c081cd767763b4d989a 279 Gene3D G3DSA:1.10.150.210 83 134 9.8E-25 T 23-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 RBRH_RS05940 8d91fd53cf402c081cd767763b4d989a 279 SUPERFAMILY SSF56784 67 275 6.37E-44 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS05940 8d91fd53cf402c081cd767763b4d989a 279 Gene3D G3DSA:3.40.50.1000 135 265 1.1E-38 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS05480 87bc6e6072cf35ca819ab698d1c1bd47 399 Gene3D G3DSA:3.40.640.10 48 317 1.6E-107 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS05480 87bc6e6072cf35ca819ab698d1c1bd47 399 Pfam PF00155 Aminotransferase class I and II 29 394 2.4E-84 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RBRH_RS05480 87bc6e6072cf35ca819ab698d1c1bd47 399 SUPERFAMILY SSF53383 1 399 8.01E-123 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS05480 87bc6e6072cf35ca819ab698d1c1bd47 399 PANTHER PTHR11879 1 399 3.4E-235 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RBRH_RS05480 87bc6e6072cf35ca819ab698d1c1bd47 399 PANTHER PTHR11879:SF11 1 399 3.4E-235 T 23-04-2016 RBRH_RS05480 87bc6e6072cf35ca819ab698d1c1bd47 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RBRH_RS05480 87bc6e6072cf35ca819ab698d1c1bd47 399 PRINTS PR00799 Aspartate aminotransferase signature 177 196 2.0E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RBRH_RS05480 87bc6e6072cf35ca819ab698d1c1bd47 399 PRINTS PR00799 Aspartate aminotransferase signature 208 220 2.0E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RBRH_RS05480 87bc6e6072cf35ca819ab698d1c1bd47 399 PRINTS PR00799 Aspartate aminotransferase signature 275 300 2.0E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RBRH_RS05480 87bc6e6072cf35ca819ab698d1c1bd47 399 PRINTS PR00799 Aspartate aminotransferase signature 343 361 2.0E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RBRH_RS11655 feca2951645212bc0f87baab8f14faed 261 PANTHER PTHR34606 18 194 1.1E-36 T 23-04-2016 RBRH_RS11655 feca2951645212bc0f87baab8f14faed 261 PANTHER PTHR34606:SF4 18 194 1.1E-36 T 23-04-2016 RBRH_RS11655 feca2951645212bc0f87baab8f14faed 261 Pfam PF04972 BON domain 128 193 2.3E-7 T 23-04-2016 IPR007055 BON domain RBRH_RS11655 feca2951645212bc0f87baab8f14faed 261 Pfam PF04972 BON domain 53 119 3.6E-12 T 23-04-2016 IPR007055 BON domain RBRH_RS11655 feca2951645212bc0f87baab8f14faed 261 SMART SM00749 55 119 11.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RBRH_RS11655 feca2951645212bc0f87baab8f14faed 261 SMART SM00749 133 196 0.053 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RBRH_RS05260 c1e353724441652f3fd256f542646904 232 PANTHER PTHR13707 1 231 4.8E-137 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RBRH_RS05260 c1e353724441652f3fd256f542646904 232 SMART SM00882 5 217 3.4E-93 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RBRH_RS05260 c1e353724441652f3fd256f542646904 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 23-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 RBRH_RS05260 c1e353724441652f3fd256f542646904 232 Pfam PF01144 Coenzyme A transferase 7 217 7.4E-78 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RBRH_RS05260 c1e353724441652f3fd256f542646904 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 217 6.8E-81 T 23-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 RBRH_RS05260 c1e353724441652f3fd256f542646904 232 Gene3D G3DSA:3.40.1080.10 3 216 3.0E-99 T 23-04-2016 RBRH_RS05260 c1e353724441652f3fd256f542646904 232 SUPERFAMILY SSF100950 2 226 2.57E-86 T 23-04-2016 RBRH_RS11625 36db03732ea936327c98a7c2082ffc87 169 Pfam PF01814 Hemerythrin HHE cation binding domain 16 136 2.2E-15 T 23-04-2016 IPR012312 Haemerythrin-like RBRH_RS11625 36db03732ea936327c98a7c2082ffc87 169 PANTHER PTHR35585 15 168 6.1E-21 T 23-04-2016 RBRH_RS11625 36db03732ea936327c98a7c2082ffc87 169 Gene3D G3DSA:1.20.120.520 12 154 9.7E-12 T 23-04-2016 RBRH_RS11625 36db03732ea936327c98a7c2082ffc87 169 PANTHER PTHR35585:SF1 15 168 6.1E-21 T 23-04-2016 RBRH_RS03390 0d8b87513100ed2a265447c9b8a0fd5d 254 PANTHER PTHR30456:SF0 10 252 5.1E-128 T 23-04-2016 RBRH_RS03390 0d8b87513100ed2a265447c9b8a0fd5d 254 SUPERFAMILY SSF63892 11 246 1.31E-95 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RBRH_RS03390 0d8b87513100ed2a265447c9b8a0fd5d 254 PANTHER PTHR30456 10 252 5.1E-128 T 23-04-2016 RBRH_RS03390 0d8b87513100ed2a265447c9b8a0fd5d 254 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 250 121.743 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RBRH_RS03390 0d8b87513100ed2a265447c9b8a0fd5d 254 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 13 245 1.2E-90 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RBRH_RS03390 0d8b87513100ed2a265447c9b8a0fd5d 254 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 12 245 1.6E-99 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RBRH_RS03390 0d8b87513100ed2a265447c9b8a0fd5d 254 Gene3D G3DSA:3.20.20.70 11 247 1.4E-105 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS08565 11230c8c98a4b6e8fb8a8b1e6ba3345e 150 PANTHER PTHR30558 1 149 1.3E-32 T 23-04-2016 RBRH_RS08565 11230c8c98a4b6e8fb8a8b1e6ba3345e 150 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 149 4.9E-29 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RBRH_RS08565 11230c8c98a4b6e8fb8a8b1e6ba3345e 150 PANTHER PTHR30558:SF7 1 149 1.3E-32 T 23-04-2016 RBRH_RS08565 11230c8c98a4b6e8fb8a8b1e6ba3345e 150 TIGRFAM TIGR02801 tolR: protein TolR 19 147 4.0E-39 T 23-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 RBRH_RS11640 3af7644e9fbb7a4d9eb7db40f66a3fa3 163 Pfam PF13508 Acetyltransferase (GNAT) domain 84 143 1.2E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RBRH_RS11640 3af7644e9fbb7a4d9eb7db40f66a3fa3 163 SUPERFAMILY SSF55729 10 143 2.66E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS11640 3af7644e9fbb7a4d9eb7db40f66a3fa3 163 Gene3D G3DSA:3.40.630.30 37 143 1.6E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS11640 3af7644e9fbb7a4d9eb7db40f66a3fa3 163 PANTHER PTHR36449 1 163 4.1E-55 T 23-04-2016 RBRH_RS11325 a5f46d05d0d443607ac1818783652a76 85 Pfam PF04380 Membrane fusogenic activity 3 76 1.7E-27 T 23-04-2016 IPR007475 Membrane fusogenic activity RBRH_RS11325 a5f46d05d0d443607ac1818783652a76 85 PANTHER PTHR38040 1 83 2.3E-20 T 23-04-2016 RBRH_RS11325 a5f46d05d0d443607ac1818783652a76 85 PANTHER PTHR38040:SF1 1 83 2.3E-20 T 23-04-2016 RBRH_RS15620 5f45ae0032eb82fd1e467322ddbf7a40 119 Pfam PF07690 Major Facilitator Superfamily 3 118 1.8E-19 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS15620 5f45ae0032eb82fd1e467322ddbf7a40 119 PANTHER PTHR23500 13 113 9.7E-19 T 23-04-2016 RBRH_RS15620 5f45ae0032eb82fd1e467322ddbf7a40 119 Gene3D G3DSA:1.20.1250.20 3 118 1.1E-23 T 23-04-2016 RBRH_RS15620 5f45ae0032eb82fd1e467322ddbf7a40 119 SUPERFAMILY SSF103473 2 119 8.5E-25 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS15620 5f45ae0032eb82fd1e467322ddbf7a40 119 PANTHER PTHR23500:SF89 13 113 9.7E-19 T 23-04-2016 RBRH_RS08005 ffcfc232b3ef4a9001c1fe9a91c11ecf 198 PANTHER PTHR11071 38 196 2.4E-62 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RBRH_RS08005 ffcfc232b3ef4a9001c1fe9a91c11ecf 198 SUPERFAMILY SSF50891 34 195 9.5E-58 T 23-04-2016 IPR029000 Cyclophilin-like domain RBRH_RS08005 ffcfc232b3ef4a9001c1fe9a91c11ecf 198 Gene3D G3DSA:2.40.100.10 34 196 5.7E-56 T 23-04-2016 IPR029000 Cyclophilin-like domain RBRH_RS08005 ffcfc232b3ef4a9001c1fe9a91c11ecf 198 PANTHER PTHR11071:SF192 38 196 2.4E-62 T 23-04-2016 RBRH_RS08005 ffcfc232b3ef4a9001c1fe9a91c11ecf 198 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 151 166 2.2E-13 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RBRH_RS08005 ffcfc232b3ef4a9001c1fe9a91c11ecf 198 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 65 2.2E-13 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RBRH_RS08005 ffcfc232b3ef4a9001c1fe9a91c11ecf 198 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 2.2E-13 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RBRH_RS08005 ffcfc232b3ef4a9001c1fe9a91c11ecf 198 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 195 6.3E-48 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RBRH_RS08005 ffcfc232b3ef4a9001c1fe9a91c11ecf 198 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 71 88 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RBRH_RS02335 b9370cc1127d20da5efbfe820d69e559 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 300 5.8E-50 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RBRH_RS02335 b9370cc1127d20da5efbfe820d69e559 316 PANTHER PTHR11795:SF371 1 315 1.2E-115 T 23-04-2016 RBRH_RS02335 b9370cc1127d20da5efbfe820d69e559 316 PANTHER PTHR11795 1 315 1.2E-115 T 23-04-2016 RBRH_RS11525 431de519f040c4995d2dccc361faa9e2 141 Gene3D G3DSA:3.10.450.50 8 139 6.1E-36 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS11525 431de519f040c4995d2dccc361faa9e2 141 SUPERFAMILY SSF54427 34 139 1.93E-27 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS11485 9ab9c2024d5b9828219fad6e4e44fe46 543 PIRSF PIRSF002741 27 540 1.0E-116 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RBRH_RS11485 9ab9c2024d5b9828219fad6e4e44fe46 543 PANTHER PTHR30290:SF14 6 14 4.6E-181 T 23-04-2016 RBRH_RS11485 9ab9c2024d5b9828219fad6e4e44fe46 543 PANTHER PTHR30290:SF14 35 542 4.6E-181 T 23-04-2016 RBRH_RS11485 9ab9c2024d5b9828219fad6e4e44fe46 543 PANTHER PTHR30290 6 14 4.6E-181 T 23-04-2016 RBRH_RS11485 9ab9c2024d5b9828219fad6e4e44fe46 543 PANTHER PTHR30290 35 542 4.6E-181 T 23-04-2016 RBRH_RS11485 9ab9c2024d5b9828219fad6e4e44fe46 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 460 7.6E-98 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RBRH_RS11485 9ab9c2024d5b9828219fad6e4e44fe46 543 Gene3D G3DSA:3.10.105.10 312 513 2.3E-67 T 23-04-2016 RBRH_RS11485 9ab9c2024d5b9828219fad6e4e44fe46 543 Gene3D G3DSA:3.40.190.10 160 311 3.1E-44 T 23-04-2016 RBRH_RS11485 9ab9c2024d5b9828219fad6e4e44fe46 543 SUPERFAMILY SSF53850 38 541 3.21E-147 T 23-04-2016 RBRH_RS01305 e4fbca761e0dc5f76d2ad8d32f799373 253 PANTHER PTHR35851:SF1 2 252 8.4E-43 T 23-04-2016 RBRH_RS01305 e4fbca761e0dc5f76d2ad8d32f799373 253 Pfam PF08478 POTRA domain, FtsQ-type 37 106 1.1E-16 T 23-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type RBRH_RS01305 e4fbca761e0dc5f76d2ad8d32f799373 253 PANTHER PTHR35851 2 252 8.4E-43 T 23-04-2016 RBRH_RS01305 e4fbca761e0dc5f76d2ad8d32f799373 253 Pfam PF03799 Cell division protein FtsQ 111 227 5.7E-26 T 23-04-2016 IPR005548 Cell division protein FtsQ/DivIB RBRH_RS01305 e4fbca761e0dc5f76d2ad8d32f799373 253 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 235 23.598 T 23-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 RBRH_RS05505 3cd1d16f7463bb881c8bdbd01a55f0b0 471 Pfam PF12801 4Fe-4S binding domain 154 185 2.0E-4 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RBRH_RS05505 3cd1d16f7463bb881c8bdbd01a55f0b0 471 Pfam PF12801 4Fe-4S binding domain 67 104 1.3E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RBRH_RS11490 0d2492c97e816b018f18a8486af2ba46 169 SUPERFAMILY SSF53448 29 88 1.13E-9 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS11490 0d2492c97e816b018f18a8486af2ba46 169 Pfam PF00535 Glycosyl transferase family 2 30 75 2.7E-6 T 23-04-2016 IPR001173 Glycosyltransferase 2-like RBRH_RS11490 0d2492c97e816b018f18a8486af2ba46 169 Gene3D G3DSA:3.90.550.10 30 74 2.7E-4 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS11490 0d2492c97e816b018f18a8486af2ba46 169 PANTHER PTHR10859 29 94 2.3E-14 T 23-04-2016 RBRH_RS11490 0d2492c97e816b018f18a8486af2ba46 169 PANTHER PTHR10859:SF95 29 94 2.3E-14 T 23-04-2016 RBRH_RS01285 9a71dccd72aac7c7b917c7c14aa123a7 424 Pfam PF01098 Cell cycle protein 54 416 1.4E-104 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RBRH_RS01285 9a71dccd72aac7c7b917c7c14aa123a7 424 PANTHER PTHR30474 37 416 1.9E-144 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RBRH_RS01285 9a71dccd72aac7c7b917c7c14aa123a7 424 PANTHER PTHR30474:SF2 37 416 1.9E-144 T 23-04-2016 RBRH_RS01285 9a71dccd72aac7c7b917c7c14aa123a7 424 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 52 414 6.0E-126 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RBRH_RS01285 9a71dccd72aac7c7b917c7c14aa123a7 424 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 50 423 39.978 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RBRH_RS09445 9d602af78e094b9ba48b021c498ca653 113 SUPERFAMILY SSF81301 10 113 1.13E-13 T 23-04-2016 RBRH_RS09445 9d602af78e094b9ba48b021c498ca653 113 Gene3D G3DSA:3.30.460.10 8 113 1.6E-16 T 23-04-2016 RBRH_RS09445 9d602af78e094b9ba48b021c498ca653 113 Pfam PF01909 Nucleotidyltransferase domain 16 57 1.6E-6 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RBRH_RS07990 e6ed9a0d47c952d589689196babd283b 326 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 165 304 2.9E-12 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RBRH_RS07990 e6ed9a0d47c952d589689196babd283b 326 SUPERFAMILY SSF48150 148 318 1.92E-42 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RBRH_RS07990 e6ed9a0d47c952d589689196babd283b 326 SMART SM00478 168 320 5.1E-18 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RBRH_RS07990 e6ed9a0d47c952d589689196babd283b 326 PANTHER PTHR10242 65 320 2.8E-57 T 23-04-2016 RBRH_RS07990 e6ed9a0d47c952d589689196babd283b 326 PANTHER PTHR10242:SF0 65 320 2.8E-57 T 23-04-2016 RBRH_RS07990 e6ed9a0d47c952d589689196babd283b 326 Gene3D G3DSA:1.10.1670.10 268 321 1.3E-17 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RBRH_RS07990 e6ed9a0d47c952d589689196babd283b 326 Gene3D G3DSA:1.10.340.30 159 265 5.0E-31 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 Gene3D G3DSA:3.30.460.10 96 275 3.6E-59 T 23-04-2016 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 Gene3D G3DSA:3.30.460.10 651 812 2.3E-49 T 23-04-2016 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 Pfam PF08335 GlnD PII-uridylyltransferase 288 431 3.8E-39 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 Pfam PF08335 GlnD PII-uridylyltransferase 827 916 1.0E-11 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 SUPERFAMILY SSF81593 816 945 3.06E-33 T 23-04-2016 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 SUPERFAMILY SSF81301 539 816 2.78E-74 T 23-04-2016 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 SUPERFAMILY SSF81301 18 276 5.61E-69 T 23-04-2016 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 PANTHER PTHR30621 18 446 7.3E-230 T 23-04-2016 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 PANTHER PTHR30621 462 940 7.3E-230 T 23-04-2016 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 9 946 19.102 T 23-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 SUPERFAMILY SSF81593 277 431 5.81E-40 T 23-04-2016 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 568 806 2.4E-63 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RBRH_RS01840 155d706ca7ae610822962754f2ce244e 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 19 260 4.0E-63 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 Gene3D G3DSA:3.40.50.720 1 161 7.3E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 PIRSF PIRSF000161 1 265 1.9E-88 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 126 262 2.5E-42 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 123 9.3E-41 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 SUPERFAMILY SSF51735 234 264 3.89E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 SUPERFAMILY SSF51735 1 124 3.89E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 PANTHER PTHR20836 1 264 4.8E-93 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 263 34.985 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 263 3.4E-96 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RBRH_RS01620 e129e6639e445da68c381f4e4bb481c1 265 SUPERFAMILY SSF55347 125 234 1.11E-37 T 23-04-2016 RBRH_RS00165 3c6c05244e1210eacdc10ec3e7480f14 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 266 2.1E-15 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RBRH_RS00165 3c6c05244e1210eacdc10ec3e7480f14 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 267 2.5E-37 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RBRH_RS00165 3c6c05244e1210eacdc10ec3e7480f14 396 PANTHER PTHR30572:SF3 37 386 9.4E-100 T 23-04-2016 RBRH_RS00165 3c6c05244e1210eacdc10ec3e7480f14 396 SUPERFAMILY SSF111369 53 306 2.88E-24 T 23-04-2016 RBRH_RS00165 3c6c05244e1210eacdc10ec3e7480f14 396 PANTHER PTHR30572 37 386 9.4E-100 T 23-04-2016 RBRH_RS00165 3c6c05244e1210eacdc10ec3e7480f14 396 Gene3D G3DSA:2.40.50.100 184 215 3.7E-16 T 23-04-2016 RBRH_RS00165 3c6c05244e1210eacdc10ec3e7480f14 396 Gene3D G3DSA:2.40.50.100 62 95 3.7E-16 T 23-04-2016 RBRH_RS01895 3699c7b25c944114822f983e83f84590 272 SUPERFAMILY SSF51621 12 272 4.4E-102 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS01895 3699c7b25c944114822f983e83f84590 272 Gene3D G3DSA:3.20.20.60 10 272 7.9E-111 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS01895 3699c7b25c944114822f983e83f84590 272 PANTHER PTHR20881:SF3 10 272 4.8E-139 T 23-04-2016 RBRH_RS01895 3699c7b25c944114822f983e83f84590 272 PANTHER PTHR20881 10 272 4.8E-139 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RBRH_RS01895 3699c7b25c944114822f983e83f84590 272 PIRSF PIRSF000388 4 272 3.4E-98 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RBRH_RS01895 3699c7b25c944114822f983e83f84590 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 12 267 8.7E-109 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RBRH_RS01895 3699c7b25c944114822f983e83f84590 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 17 272 2.8E-97 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RBRH_RS01895 3699c7b25c944114822f983e83f84590 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 272 42.253 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RBRH_RS06060 9dcea57dea6f94d0c5d56af86e4f8d68 129 PANTHER PTHR21192:SF3 17 126 3.2E-29 T 23-04-2016 RBRH_RS06060 9dcea57dea6f94d0c5d56af86e4f8d68 129 SUPERFAMILY SSF64076 2 126 7.85E-36 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RBRH_RS06060 9dcea57dea6f94d0c5d56af86e4f8d68 129 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 125 8.5E-32 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RBRH_RS06060 9dcea57dea6f94d0c5d56af86e4f8d68 129 PANTHER PTHR21192 17 126 3.2E-29 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RBRH_RS06060 9dcea57dea6f94d0c5d56af86e4f8d68 129 Gene3D G3DSA:3.40.1230.10 1 127 3.0E-44 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RBRH_RS01105 f9aa904c44bb9956db3e6a3717e8f25a 216 PANTHER PTHR30251 6 214 3.9E-47 T 23-04-2016 RBRH_RS01105 f9aa904c44bb9956db3e6a3717e8f25a 216 SUPERFAMILY SSF49354 5 123 3.4E-22 T 23-04-2016 IPR008962 PapD-like RBRH_RS01105 f9aa904c44bb9956db3e6a3717e8f25a 216 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 10 123 1.1E-18 T 23-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RBRH_RS01105 f9aa904c44bb9956db3e6a3717e8f25a 216 PANTHER PTHR30251:SF3 6 214 3.9E-47 T 23-04-2016 RBRH_RS01105 f9aa904c44bb9956db3e6a3717e8f25a 216 SUPERFAMILY SSF49584 128 205 6.21E-5 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal RBRH_RS01105 f9aa904c44bb9956db3e6a3717e8f25a 216 Gene3D G3DSA:2.60.40.360 10 123 2.0E-16 T 23-04-2016 IPR008962 PapD-like RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 SUPERFAMILY SSF55826 218 392 1.83E-33 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 Gene3D G3DSA:3.90.960.10 254 390 9.2E-29 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 SUPERFAMILY SSF52954 466 573 1.42E-29 T 23-04-2016 IPR004154 Anticodon-binding RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 562 4.8E-227 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 Pfam PF04073 Aminoacyl-tRNA editing domain 257 381 3.8E-25 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 PANTHER PTHR11451:SF3 4 244 4.2E-148 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 PANTHER PTHR11451:SF3 401 573 4.2E-148 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 Gene3D G3DSA:3.40.50.800 474 572 3.2E-27 T 23-04-2016 IPR004154 Anticodon-binding RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 461 5.9E-46 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 573 41.744 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 7.3E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 7.3E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 7.3E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 7.3E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 SUPERFAMILY SSF55681 409 479 5.57E-102 T 23-04-2016 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 SUPERFAMILY SSF55681 10 237 5.57E-102 T 23-04-2016 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 PIRSF PIRSF001535 1 576 1.3E-267 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 Pfam PF03129 Anticodon binding domain 481 570 9.6E-16 T 23-04-2016 IPR004154 Anticodon-binding RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 Gene3D G3DSA:3.30.930.10 391 473 1.6E-104 T 23-04-2016 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 Gene3D G3DSA:3.30.930.10 10 234 1.6E-104 T 23-04-2016 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 PANTHER PTHR11451 4 244 4.2E-148 T 23-04-2016 RBRH_RS01435 cbc071e7eed93d98297724a027645383 578 PANTHER PTHR11451 401 573 4.2E-148 T 23-04-2016 RBRH_RS07455 e9cd78c76208e0ebd14926aa5165f67f 201 SUPERFAMILY SSF51225 58 86 9.68E-5 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS07455 e9cd78c76208e0ebd14926aa5165f67f 201 SUPERFAMILY SSF51225 122 153 9.68E-5 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS07455 e9cd78c76208e0ebd14926aa5165f67f 201 Gene3D G3DSA:2.10.25.20 139 194 2.1E-7 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS07455 e9cd78c76208e0ebd14926aa5165f67f 201 Gene3D G3DSA:2.10.25.20 58 81 4.1E-7 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS07455 e9cd78c76208e0ebd14926aa5165f67f 201 Gene3D G3DSA:2.10.25.20 117 138 4.1E-7 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS16280 72a6dece9ead8a2d7d250042308b95f2 326 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 93 171 2.6E-11 T 23-04-2016 RBRH_RS16280 72a6dece9ead8a2d7d250042308b95f2 326 SUPERFAMILY SSF53335 89 223 9.39E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS16280 72a6dece9ead8a2d7d250042308b95f2 326 Gene3D G3DSA:3.40.50.150 89 224 2.3E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS16280 72a6dece9ead8a2d7d250042308b95f2 326 PANTHER PTHR18895 89 218 2.4E-19 T 23-04-2016 RBRH_RS07775 0310b851e60efc38ea8460aaf1f8eb10 386 PANTHER PTHR23028:SF53 9 365 2.3E-20 T 23-04-2016 RBRH_RS07775 0310b851e60efc38ea8460aaf1f8eb10 386 Pfam PF01757 Acyltransferase family 13 334 1.1E-28 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RBRH_RS07775 0310b851e60efc38ea8460aaf1f8eb10 386 PANTHER PTHR23028 9 365 2.3E-20 T 23-04-2016 RBRH_RS09255 cd6b4ea6671ccdff431f4863cd95a01e 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 3.3E-51 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS09255 cd6b4ea6671ccdff431f4863cd95a01e 156 SUPERFAMILY SSF75217 1 153 9.94E-51 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RBRH_RS09255 cd6b4ea6671ccdff431f4863cd95a01e 156 Gene3D G3DSA:3.40.1280.10 1 155 7.1E-57 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RBRH_RS09255 cd6b4ea6671ccdff431f4863cd95a01e 156 PANTHER PTHR33603 1 155 2.8E-57 T 23-04-2016 RBRH_RS09255 cd6b4ea6671ccdff431f4863cd95a01e 156 PANTHER PTHR33603:SF1 1 155 2.8E-57 T 23-04-2016 RBRH_RS09255 cd6b4ea6671ccdff431f4863cd95a01e 156 PIRSF PIRSF004505 1 155 1.7E-48 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS09255 cd6b4ea6671ccdff431f4863cd95a01e 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 29.006 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS09255 cd6b4ea6671ccdff431f4863cd95a01e 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 1.0E-49 T 23-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RBRH_RS05840 29f66cb94fb2c0639527bb43defe4c7f 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 7.8E-19 T 23-04-2016 IPR019201 Protein of unknown function DUF2065 RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 PANTHER PTHR30154:SF0 3 156 7.7E-75 T 23-04-2016 RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 5.1E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 5.1E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 5.1E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 4.4E-19 T 23-04-2016 RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 SUPERFAMILY SSF54909 72 156 4.56E-18 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 SMART SM00344 11 120 6.6E-43 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 Gene3D G3DSA:1.10.10.10 12 63 1.4E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 Gene3D G3DSA:3.30.70.920 64 158 2.5E-30 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 SUPERFAMILY SSF46785 10 70 3.82E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 PANTHER PTHR30154 3 156 7.7E-75 T 23-04-2016 RBRH_RS03055 272ece2143a1b929af14e5dac3384e86 162 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 6.9E-17 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 PANTHER PTHR23501 2 455 2.2E-185 T 23-04-2016 RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 Pfam PF07690 Major Facilitator Superfamily 15 404 4.5E-38 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 SUPERFAMILY SSF103473 243 462 1.31E-51 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 SUPERFAMILY SSF103473 10 191 1.31E-51 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 3.3E-6 T 23-04-2016 RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 3.3E-6 T 23-04-2016 RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 3.3E-6 T 23-04-2016 RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 198 216 3.3E-6 T 23-04-2016 RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 PANTHER PTHR23501:SF1 2 455 2.2E-185 T 23-04-2016 RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 Gene3D G3DSA:1.20.1250.20 10 186 3.9E-26 T 23-04-2016 RBRH_RS11945 06d25752d49ac2e7727773e304ada515 476 Gene3D G3DSA:1.20.1250.20 259 456 5.8E-9 T 23-04-2016 RBRH_RS09185 cd02d55e651ab2a84d06f72ba7514abb 194 Gene3D G3DSA:3.40.50.450 3 189 4.3E-73 T 23-04-2016 RBRH_RS09185 cd02d55e651ab2a84d06f72ba7514abb 194 PANTHER PTHR31223 1 189 4.7E-87 T 23-04-2016 RBRH_RS09185 cd02d55e651ab2a84d06f72ba7514abb 194 PANTHER PTHR31223:SF0 1 189 4.7E-87 T 23-04-2016 RBRH_RS09185 cd02d55e651ab2a84d06f72ba7514abb 194 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 179 1.9E-65 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RBRH_RS09185 cd02d55e651ab2a84d06f72ba7514abb 194 SUPERFAMILY SSF102405 2 179 5.19E-63 T 23-04-2016 RBRH_RS09185 cd02d55e651ab2a84d06f72ba7514abb 194 Pfam PF03641 Possible lysine decarboxylase 46 176 1.8E-42 T 23-04-2016 IPR031100 LOG family RBRH_RS12060 2bcfc51368cdf007cf68fffc9f9b39f1 167 PANTHER PTHR33803:SF1 1 156 2.1E-55 T 23-04-2016 RBRH_RS12060 2bcfc51368cdf007cf68fffc9f9b39f1 167 Pfam PF01609 Transposase DDE domain 8 72 1.2E-5 T 23-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RBRH_RS12060 2bcfc51368cdf007cf68fffc9f9b39f1 167 PANTHER PTHR33803 1 156 2.1E-55 T 23-04-2016 RBRH_RS06010 326e5e9cc8d44d67e0ad7ab930154f73 348 Pfam PF00877 NlpC/P60 family 67 174 6.9E-28 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS06010 326e5e9cc8d44d67e0ad7ab930154f73 348 PANTHER PTHR21666 61 180 3.1E-39 T 23-04-2016 RBRH_RS06010 326e5e9cc8d44d67e0ad7ab930154f73 348 Gene3D G3DSA:3.90.1720.10 55 177 2.5E-43 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RBRH_RS06010 326e5e9cc8d44d67e0ad7ab930154f73 348 SUPERFAMILY SSF54001 57 176 8.34E-40 T 23-04-2016 RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 SUPERFAMILY SSF52540 122 171 1.03E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 SUPERFAMILY SSF52540 584 747 1.03E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 SUPERFAMILY SSF52540 537 551 1.03E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 SUPERFAMILY SSF52540 260 334 1.03E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 Gene3D G3DSA:3.40.50.300 271 321 4.8E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 Gene3D G3DSA:3.40.50.300 124 196 4.8E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 Pfam PF13307 Helicase C-terminal domain 609 770 7.5E-33 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 PANTHER PTHR11472:SF37 123 775 7.5E-168 T 23-04-2016 RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 PANTHER PTHR11472 37 76 7.5E-168 T 23-04-2016 RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 PANTHER PTHR11472 123 775 7.5E-168 T 23-04-2016 RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 Gene3D G3DSA:3.40.50.300 610 754 4.2E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 SMART SM00491 623 757 1.7E-36 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RBRH_RS05880 17e6af602bccea5b8363b2e44a5c3667 803 PANTHER PTHR11472:SF37 37 76 7.5E-168 T 23-04-2016 RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 Gene3D G3DSA:3.40.50.720 9 257 5.0E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 7.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 7.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 PANTHER PTHR24320:SF1 9 194 1.1E-37 T 23-04-2016 RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 Pfam PF00106 short chain dehydrogenase 9 196 2.0E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 SUPERFAMILY SSF51735 9 253 5.51E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 PANTHER PTHR24320 9 194 1.1E-37 T 23-04-2016 RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS11480 4bccdd10d788e115e32da7f49cc66d30 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.6E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS00065 9a705d162fefe2762916dd4db530fb81 592 Gene3D G3DSA:2.130.10.10 399 535 2.5E-5 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RBRH_RS00065 9a705d162fefe2762916dd4db530fb81 592 SUPERFAMILY SSF69322 399 535 1.7E-6 T 23-04-2016 RBRH_RS00210 f08dcb6cb2db7a0020d732334c20ec9a 166 SUPERFAMILY SSF56524 44 165 7.06E-16 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RBRH_RS00210 f08dcb6cb2db7a0020d732334c20ec9a 166 Pfam PF00174 Oxidoreductase molybdopterin binding domain 62 140 2.6E-8 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RBRH_RS00210 f08dcb6cb2db7a0020d732334c20ec9a 166 Gene3D G3DSA:3.90.420.10 58 140 4.2E-8 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RBRH_RS05445 31b0a8279b2a04f559645804404fa5af 150 SUPERFAMILY SSF47729 54 149 1.43E-12 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RBRH_RS05445 31b0a8279b2a04f559645804404fa5af 150 SMART SM00411 53 150 3.5E-8 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS05445 31b0a8279b2a04f559645804404fa5af 150 PANTHER PTHR33175 53 148 1.3E-19 T 23-04-2016 RBRH_RS05445 31b0a8279b2a04f559645804404fa5af 150 Gene3D G3DSA:4.10.520.10 54 148 4.9E-13 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RBRH_RS05445 31b0a8279b2a04f559645804404fa5af 150 Pfam PF00216 Bacterial DNA-binding protein 54 148 5.9E-15 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RBRH_RS05445 31b0a8279b2a04f559645804404fa5af 150 PANTHER PTHR33175:SF1 53 148 1.3E-19 T 23-04-2016 RBRH_RS02515 228ed94e9cfe88ce18d28bb376cc423c 94 Gene3D G3DSA:3.10.129.10 8 84 3.0E-14 T 23-04-2016 IPR029069 HotDog domain RBRH_RS02515 228ed94e9cfe88ce18d28bb376cc423c 94 SUPERFAMILY SSF54637 21 84 2.17E-11 T 23-04-2016 IPR029069 HotDog domain RBRH_RS02515 228ed94e9cfe88ce18d28bb376cc423c 94 PANTHER PTHR12418:SF32 23 79 6.9E-16 T 23-04-2016 RBRH_RS02515 228ed94e9cfe88ce18d28bb376cc423c 94 PANTHER PTHR12418 23 79 6.9E-16 T 23-04-2016 RBRH_RS05530 255c271d141502ffa2d3b5dfa5f37d68 329 PANTHER PTHR30537 1 316 4.9E-93 T 23-04-2016 RBRH_RS05530 255c271d141502ffa2d3b5dfa5f37d68 329 SUPERFAMILY SSF53850 94 301 2.17E-43 T 23-04-2016 RBRH_RS05530 255c271d141502ffa2d3b5dfa5f37d68 329 SUPERFAMILY SSF46785 7 92 6.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS05530 255c271d141502ffa2d3b5dfa5f37d68 329 Pfam PF03466 LysR substrate binding domain 93 297 5.8E-40 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS05530 255c271d141502ffa2d3b5dfa5f37d68 329 PANTHER PTHR30537:SF29 1 316 4.9E-93 T 23-04-2016 RBRH_RS05530 255c271d141502ffa2d3b5dfa5f37d68 329 Gene3D G3DSA:3.40.190.10 96 182 5.3E-19 T 23-04-2016 RBRH_RS05530 255c271d141502ffa2d3b5dfa5f37d68 329 Gene3D G3DSA:3.40.190.10 183 267 4.4E-13 T 23-04-2016 RBRH_RS05530 255c271d141502ffa2d3b5dfa5f37d68 329 Gene3D G3DSA:1.10.10.10 7 91 9.3E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS05530 255c271d141502ffa2d3b5dfa5f37d68 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.7E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS00235 2cc1e7cc8e974112842bd6779b77b6ff 487 Gene3D G3DSA:1.20.1250.20 284 453 6.7E-16 T 23-04-2016 RBRH_RS00235 2cc1e7cc8e974112842bd6779b77b6ff 487 SUPERFAMILY SSF103473 26 451 2.75E-55 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS00235 2cc1e7cc8e974112842bd6779b77b6ff 487 Pfam PF00083 Sugar (and other) transporter 63 445 7.5E-27 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RBRH_RS00235 2cc1e7cc8e974112842bd6779b77b6ff 487 PANTHER PTHR24064 59 445 4.6E-31 T 23-04-2016 RBRH_RS00235 2cc1e7cc8e974112842bd6779b77b6ff 487 Gene3D G3DSA:1.20.1250.20 32 210 2.0E-25 T 23-04-2016 RBRH_RS00665 417cb1bd49f228285491812c31592db7 931 Pfam PF13362 Toprim domain 223 341 7.3E-24 T 23-04-2016 IPR006171 Toprim domain RBRH_RS00665 417cb1bd49f228285491812c31592db7 931 SUPERFAMILY SSF57783 4 99 1.34E-15 T 23-04-2016 RBRH_RS00665 417cb1bd49f228285491812c31592db7 931 Gene3D G3DSA:3.90.580.10 3 98 5.2E-14 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RBRH_RS00665 417cb1bd49f228285491812c31592db7 931 Gene3D G3DSA:3.40.1360.10 214 354 4.6E-8 T 23-04-2016 RBRH_RS11355 7bbc9f08f04904e9e8b4ee6ea2719c06 108 SUPERFAMILY SSF51215 27 92 1.7E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RBRH_RS11355 7bbc9f08f04904e9e8b4ee6ea2719c06 108 Pfam PF11142 Protein of unknown function (DUF2917) 10 67 1.6E-19 T 23-04-2016 IPR021317 Protein of unknown function DUF2917 RBRH_RS12015 b7d25ca796d28507953968db74ff5e2e 170 Pfam PF04093 rod shape-determining protein MreD 12 154 1.3E-16 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RBRH_RS12015 b7d25ca796d28507953968db74ff5e2e 170 PANTHER PTHR37484 5 164 1.3E-20 T 23-04-2016 RBRH_RS12015 b7d25ca796d28507953968db74ff5e2e 170 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 12 155 1.7E-27 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RBRH_RS12015 b7d25ca796d28507953968db74ff5e2e 170 PIRSF PIRSF018472 4 163 2.0E-41 T 23-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 SUPERFAMILY SSF53383 107 482 3.22E-79 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 Gene3D G3DSA:3.40.640.10 144 364 5.8E-53 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 PANTHER PTHR11751 97 484 1.4E-100 T 23-04-2016 RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 Pfam PF00155 Aminotransferase class I and II 139 408 1.1E-22 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 SUPERFAMILY SSF46785 16 85 2.14E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 8.2E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 SMART SM00345 24 83 3.9E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 6.1E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 6.1E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 Gene3D G3DSA:1.10.10.10 11 84 5.8E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS07555 3db99ef0f964b2d8ff5f7bfb87d4b49a 486 PANTHER PTHR11751:SF10 97 484 1.4E-100 T 23-04-2016 RBRH_RS02865 26d2a3b22ec50287f8505261a6828d62 314 Gene3D G3DSA:3.40.50.2000 226 291 2.4E-10 T 23-04-2016 RBRH_RS02865 26d2a3b22ec50287f8505261a6828d62 314 SUPERFAMILY SSF53756 30 302 7.53E-18 T 23-04-2016 RBRH_RS07830 9005e306366036e9a86e0592e8a89045 507 PANTHER PTHR11699:SF183 1 491 0.0 T 23-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 RBRH_RS07830 9005e306366036e9a86e0592e8a89045 507 Pfam PF00171 Aldehyde dehydrogenase family 23 487 7.9E-143 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS07830 9005e306366036e9a86e0592e8a89045 507 Gene3D G3DSA:3.40.309.10 272 452 7.8E-67 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RBRH_RS07830 9005e306366036e9a86e0592e8a89045 507 Gene3D G3DSA:3.40.605.10 14 271 8.0E-100 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RBRH_RS07830 9005e306366036e9a86e0592e8a89045 507 PANTHER PTHR11699 1 491 0.0 T 23-04-2016 RBRH_RS07830 9005e306366036e9a86e0592e8a89045 507 SUPERFAMILY SSF53720 9 493 1.11E-147 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RBRH_RS07830 9005e306366036e9a86e0592e8a89045 507 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 15 491 1.3E-229 T 23-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 RBRH_RS07830 9005e306366036e9a86e0592e8a89045 507 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RBRH_RS09035 04277f8cdbcbaf20b052e9a3bf97ab1b 230 PANTHER PTHR33269:SF1 1 203 4.0E-54 T 23-04-2016 RBRH_RS09035 04277f8cdbcbaf20b052e9a3bf97ab1b 230 PANTHER PTHR33269 1 203 4.0E-54 T 23-04-2016 RBRH_RS09035 04277f8cdbcbaf20b052e9a3bf97ab1b 230 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 172 1.3E-34 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 RBRH_RS08275 b71f43902fdaa96c127ae3ec27bb502c 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 91 5.9E-13 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RBRH_RS08275 b71f43902fdaa96c127ae3ec27bb502c 113 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 23-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 RBRH_RS08275 b71f43902fdaa96c127ae3ec27bb502c 113 SUPERFAMILY SSF54292 4 109 5.54E-31 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RBRH_RS08275 b71f43902fdaa96c127ae3ec27bb502c 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 3 112 4.7E-55 T 23-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 RBRH_RS08275 b71f43902fdaa96c127ae3ec27bb502c 113 PANTHER PTHR23426 7 113 1.5E-36 T 23-04-2016 RBRH_RS08275 b71f43902fdaa96c127ae3ec27bb502c 113 Gene3D G3DSA:3.10.20.30 4 110 1.4E-32 T 23-04-2016 IPR012675 Beta-grasp domain RBRH_RS08275 b71f43902fdaa96c127ae3ec27bb502c 113 PRINTS PR00355 Adrenodoxin signature 60 74 3.0E-9 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RBRH_RS08275 b71f43902fdaa96c127ae3ec27bb502c 113 PRINTS PR00355 Adrenodoxin signature 83 91 3.0E-9 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RBRH_RS08275 b71f43902fdaa96c127ae3ec27bb502c 113 PRINTS PR00355 Adrenodoxin signature 42 52 3.0E-9 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RBRH_RS00745 1752e81d6012213aebc2e2453f5c0491 301 PANTHER PTHR35862 6 300 1.3E-97 T 23-04-2016 RBRH_RS00745 1752e81d6012213aebc2e2453f5c0491 301 Pfam PF04865 Baseplate J-like protein 119 246 9.4E-20 T 23-04-2016 IPR006949 Baseplate protein J-like RBRH_RS00745 1752e81d6012213aebc2e2453f5c0491 301 PIRSF PIRSF020481 3 300 4.6E-107 T 23-04-2016 IPR014507 Baseplate assembly protein J, predicted RBRH_RS00745 1752e81d6012213aebc2e2453f5c0491 301 PANTHER PTHR35862:SF1 6 300 1.3E-97 T 23-04-2016 RBRH_RS10090 c1a505c9871a5fa96c320f10617d75b7 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 2.9E-14 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS10090 c1a505c9871a5fa96c320f10617d75b7 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 2.9E-14 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS10090 c1a505c9871a5fa96c320f10617d75b7 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 2.9E-14 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS10090 c1a505c9871a5fa96c320f10617d75b7 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 2.9E-14 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS10090 c1a505c9871a5fa96c320f10617d75b7 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 2.9E-14 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS10090 c1a505c9871a5fa96c320f10617d75b7 253 PIRSF PIRSF006648 3 253 8.1E-32 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS10090 c1a505c9871a5fa96c320f10617d75b7 253 Pfam PF01061 ABC-2 type transporter 5 214 1.4E-38 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RBRH_RS10090 c1a505c9871a5fa96c320f10617d75b7 253 PANTHER PTHR30413:SF5 1 253 1.8E-117 T 23-04-2016 RBRH_RS10090 c1a505c9871a5fa96c320f10617d75b7 253 PANTHER PTHR30413 1 253 1.8E-117 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS12635 6ab8222dc900eba739d7d1e8def7617a 89 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 1 87 2.2E-29 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RBRH_RS12635 6ab8222dc900eba739d7d1e8def7617a 89 PANTHER PTHR33375 1 89 3.5E-35 T 23-04-2016 RBRH_RS12635 6ab8222dc900eba739d7d1e8def7617a 89 Gene3D G3DSA:3.90.1530.10 1 38 1.2E-10 T 23-04-2016 RBRH_RS12635 6ab8222dc900eba739d7d1e8def7617a 89 SUPERFAMILY SSF110849 1 34 3.14E-6 T 23-04-2016 IPR003115 ParB/Sulfiredoxin RBRH_RS12635 6ab8222dc900eba739d7d1e8def7617a 89 Gene3D G3DSA:1.10.260.40 46 76 3.5E-4 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS12635 6ab8222dc900eba739d7d1e8def7617a 89 SUPERFAMILY SSF109709 25 88 7.72E-24 T 23-04-2016 RBRH_RS10720 734c1279ddf73f76fecd1a6aabf68040 368 ProSitePatterns PS00483 Dihydroorotase signature 2. 270 281 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS10720 734c1279ddf73f76fecd1a6aabf68040 368 PIRSF PIRSF001237 20 368 8.1E-138 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS10720 734c1279ddf73f76fecd1a6aabf68040 368 Pfam PF01979 Amidohydrolase family 30 329 6.3E-17 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RBRH_RS10720 734c1279ddf73f76fecd1a6aabf68040 368 SUPERFAMILY SSF51556 22 367 2.47E-144 T 23-04-2016 IPR032466 Metal-dependent hydrolase RBRH_RS10720 734c1279ddf73f76fecd1a6aabf68040 368 PANTHER PTHR11647 23 355 1.8E-164 T 23-04-2016 RBRH_RS10720 734c1279ddf73f76fecd1a6aabf68040 368 Hamap MF_00219 Dihydroorotase [pyrC]. 21 368 43.882 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS10720 734c1279ddf73f76fecd1a6aabf68040 368 Gene3D G3DSA:3.20.20.140 21 367 2.0E-136 T 23-04-2016 RBRH_RS10720 734c1279ddf73f76fecd1a6aabf68040 368 ProSitePatterns PS00482 Dihydroorotase signature 1. 30 38 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS10720 734c1279ddf73f76fecd1a6aabf68040 368 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 23 368 2.1E-140 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS10720 734c1279ddf73f76fecd1a6aabf68040 368 PANTHER PTHR11647:SF59 23 355 1.8E-164 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RBRH_RS03670 a48f1aacc12d8feee738a85fd6376838 97 PANTHER PTHR10909:SF307 1 96 2.0E-56 T 23-04-2016 RBRH_RS03670 a48f1aacc12d8feee738a85fd6376838 97 PANTHER PTHR10909 1 96 2.0E-56 T 23-04-2016 RBRH_RS03670 a48f1aacc12d8feee738a85fd6376838 97 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 49 68 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RBRH_RS03670 a48f1aacc12d8feee738a85fd6376838 97 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 1 89 1.9E-10 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RBRH_RS03670 a48f1aacc12d8feee738a85fd6376838 97 Gene3D G3DSA:1.20.140.10 1 94 1.3E-17 T 23-04-2016 RBRH_RS03670 a48f1aacc12d8feee738a85fd6376838 97 SUPERFAMILY SSF47203 1 95 1.53E-19 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RBRH_RS10485 3b7ea2feb303bfbf45d2fb0536cc0042 83 SUPERFAMILY SSF143120 1 43 3.14E-11 T 23-04-2016 RBRH_RS10485 3b7ea2feb303bfbf45d2fb0536cc0042 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 43 1.4E-8 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RBRH_RS10485 3b7ea2feb303bfbf45d2fb0536cc0042 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 44 7.1E-12 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RBRH_RS10485 3b7ea2feb303bfbf45d2fb0536cc0042 83 Gene3D G3DSA:3.40.1620.10 1 43 3.0E-10 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RBRH_RS06775 3609eb2e6b753f886d9bf7a2a86a7863 401 PANTHER PTHR30483 11 371 6.6E-105 T 23-04-2016 RBRH_RS06775 3609eb2e6b753f886d9bf7a2a86a7863 401 Gene3D G3DSA:3.40.50.2300 167 308 1.4E-25 T 23-04-2016 RBRH_RS06775 3609eb2e6b753f886d9bf7a2a86a7863 401 SUPERFAMILY SSF53822 38 371 4.0E-79 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RBRH_RS06775 3609eb2e6b753f886d9bf7a2a86a7863 401 PANTHER PTHR30483:SF13 11 371 6.6E-105 T 23-04-2016 RBRH_RS06775 3609eb2e6b753f886d9bf7a2a86a7863 401 Pfam PF13458 Periplasmic binding protein 38 357 7.6E-72 T 23-04-2016 IPR028081 Leucine-binding protein domain RBRH_RS06775 3609eb2e6b753f886d9bf7a2a86a7863 401 Gene3D G3DSA:3.40.50.2300 34 161 1.0E-39 T 23-04-2016 RBRH_RS06775 3609eb2e6b753f886d9bf7a2a86a7863 401 Gene3D G3DSA:3.40.50.2300 309 359 1.0E-39 T 23-04-2016 RBRH_RS08125 ae7ea1c22a88ea2e6edfcce178808f74 258 SUPERFAMILY SSF56281 4 247 1.97E-38 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS08125 ae7ea1c22a88ea2e6edfcce178808f74 258 SMART SM00849 11 191 9.8E-10 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS08125 ae7ea1c22a88ea2e6edfcce178808f74 258 PANTHER PTHR13754:SF15 1 230 2.1E-53 T 23-04-2016 RBRH_RS08125 ae7ea1c22a88ea2e6edfcce178808f74 258 Pfam PF12706 Beta-lactamase superfamily domain 26 210 5.7E-22 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS08125 ae7ea1c22a88ea2e6edfcce178808f74 258 Gene3D G3DSA:3.60.15.10 9 232 6.7E-33 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS08125 ae7ea1c22a88ea2e6edfcce178808f74 258 PANTHER PTHR13754 1 230 2.1E-53 T 23-04-2016 RBRH_RS01900 117df257808aa28aabcfa00a747293da 230 PIRSF PIRSF000705 12 223 1.9E-52 T 23-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 RBRH_RS01900 117df257808aa28aabcfa00a747293da 230 PANTHER PTHR10513:SF16 23 217 1.2E-35 T 23-04-2016 RBRH_RS01900 117df257808aa28aabcfa00a747293da 230 PANTHER PTHR10513 23 217 1.2E-35 T 23-04-2016 RBRH_RS01900 117df257808aa28aabcfa00a747293da 230 Gene3D G3DSA:3.40.50.300 21 199 8.2E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS01900 117df257808aa28aabcfa00a747293da 230 Pfam PF01712 Deoxynucleoside kinase 24 214 1.1E-34 T 23-04-2016 IPR031314 Deoxynucleoside kinase domain RBRH_RS01900 117df257808aa28aabcfa00a747293da 230 SUPERFAMILY SSF52540 23 217 5.14E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09665 382e45976811ba391019258d0038a92e 259 SMART SM00382 32 231 1.6E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS09665 382e45976811ba391019258d0038a92e 259 PANTHER PTHR24220:SF347 9 259 1.6E-164 T 23-04-2016 RBRH_RS09665 382e45976811ba391019258d0038a92e 259 PIRSF PIRSF039085 4 259 4.1E-117 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RBRH_RS09665 382e45976811ba391019258d0038a92e 259 PANTHER PTHR24220 9 259 1.6E-164 T 23-04-2016 RBRH_RS09665 382e45976811ba391019258d0038a92e 259 SUPERFAMILY SSF52540 9 253 1.36E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09665 382e45976811ba391019258d0038a92e 259 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS09665 382e45976811ba391019258d0038a92e 259 Gene3D G3DSA:3.40.50.300 8 254 3.4E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS09665 382e45976811ba391019258d0038a92e 259 Pfam PF00005 ABC transporter 23 183 4.1E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS13255 fe0ee2c5fe3948e8803e5790929e3d40 89 SUPERFAMILY SSF54211 8 89 1.14E-20 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS13255 fe0ee2c5fe3948e8803e5790929e3d40 89 Gene3D G3DSA:3.30.1700.10 3 89 3.2E-26 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RBRH_RS13255 fe0ee2c5fe3948e8803e5790929e3d40 89 PANTHER PTHR33694:SF1 1 89 1.4E-26 T 23-04-2016 RBRH_RS13255 fe0ee2c5fe3948e8803e5790929e3d40 89 PANTHER PTHR33694 1 89 1.4E-26 T 23-04-2016 RBRH_RS13255 fe0ee2c5fe3948e8803e5790929e3d40 89 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 2 89 1.1E-25 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RBRH_RS10625 ee982a40976d0acd7524509f9db8bc8a 791 Pfam PF04453 Organic solvent tolerance protein 320 692 9.9E-87 T 23-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 RBRH_RS10625 ee982a40976d0acd7524509f9db8bc8a 791 Gene3D G3DSA:2.60.450.10 95 221 1.6E-5 T 23-04-2016 RBRH_RS10625 ee982a40976d0acd7524509f9db8bc8a 791 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 27 758 19.224 T 23-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 RBRH_RS10625 ee982a40976d0acd7524509f9db8bc8a 791 PANTHER PTHR30189 90 788 6.0E-53 T 23-04-2016 RBRH_RS00525 4754f39f7dd4e0d32f8fe46fc7e5a1b9 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 8.6E-28 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RBRH_RS00525 4754f39f7dd4e0d32f8fe46fc7e5a1b9 156 SUPERFAMILY SSF81573 63 121 2.35E-10 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RBRH_RS00525 4754f39f7dd4e0d32f8fe46fc7e5a1b9 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 6.1E-41 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 RBRH_RS00525 4754f39f7dd4e0d32f8fe46fc7e5a1b9 156 PANTHER PTHR33445 1 156 2.0E-36 T 23-04-2016 RBRH_RS00525 4754f39f7dd4e0d32f8fe46fc7e5a1b9 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.352 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RBRH_RS00525 4754f39f7dd4e0d32f8fe46fc7e5a1b9 156 Gene3D G3DSA:1.20.5.620 63 121 1.4E-12 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RBRH_RS05520 3677a49fa062457968de1d2ee96a1f45 107 PANTHER PTHR39624 1 104 4.3E-34 T 23-04-2016 RBRH_RS05520 3677a49fa062457968de1d2ee96a1f45 107 PANTHER PTHR39624:SF2 1 104 4.3E-34 T 23-04-2016 RBRH_RS05520 3677a49fa062457968de1d2ee96a1f45 107 SUPERFAMILY SSF82784 2 100 1.83E-28 T 23-04-2016 IPR003718 OsmC/Ohr family RBRH_RS05520 3677a49fa062457968de1d2ee96a1f45 107 Gene3D G3DSA:3.30.300.20 2 103 2.1E-32 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta RBRH_RS05520 3677a49fa062457968de1d2ee96a1f45 107 Pfam PF02566 OsmC-like protein 10 100 3.5E-20 T 23-04-2016 IPR003718 OsmC/Ohr family RBRH_RS05045 6f117ee339c05d060450f9e4d21ee2ba 213 SMART SM01118 2 213 3.3E-28 T 23-04-2016 IPR023577 CYTH domain RBRH_RS05045 6f117ee339c05d060450f9e4d21ee2ba 213 PANTHER PTHR39569 2 212 1.0E-36 T 23-04-2016 RBRH_RS05045 6f117ee339c05d060450f9e4d21ee2ba 213 SUPERFAMILY SSF55154 1 212 6.7E-40 T 23-04-2016 IPR033469 CYTH-like domain RBRH_RS05045 6f117ee339c05d060450f9e4d21ee2ba 213 Gene3D G3DSA:2.40.320.10 1 212 2.4E-33 T 23-04-2016 IPR023577 CYTH domain RBRH_RS05045 6f117ee339c05d060450f9e4d21ee2ba 213 PANTHER PTHR39569:SF1 2 212 1.0E-36 T 23-04-2016 RBRH_RS05045 6f117ee339c05d060450f9e4d21ee2ba 213 Pfam PF01928 CYTH domain 3 207 2.0E-27 T 23-04-2016 IPR023577 CYTH domain RBRH_RS05750 ddc5e7f6a7347fe265004397f4f0045c 290 PANTHER PTHR11579 77 285 9.6E-61 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RBRH_RS05750 ddc5e7f6a7347fe265004397f4f0045c 290 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 209 224 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RBRH_RS05750 ddc5e7f6a7347fe265004397f4f0045c 290 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 80 288 6.2E-59 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RBRH_RS05750 ddc5e7f6a7347fe265004397f4f0045c 290 Gene3D G3DSA:3.40.50.150 90 288 1.1E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS05750 ddc5e7f6a7347fe265004397f4f0045c 290 SUPERFAMILY SSF53335 82 287 2.01E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS05750 ddc5e7f6a7347fe265004397f4f0045c 290 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 84 287 2.3E-56 T 23-04-2016 RBRH_RS05750 ddc5e7f6a7347fe265004397f4f0045c 290 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 79 289 33.631 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RBRH_RS09830 3e7e0ca133f2feb5aa9379b6349a874f 339 Gene3D G3DSA:3.40.50.2000 2 161 1.4E-38 T 23-04-2016 RBRH_RS09830 3e7e0ca133f2feb5aa9379b6349a874f 339 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 334 1.4E-116 T 23-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RBRH_RS09830 3e7e0ca133f2feb5aa9379b6349a874f 339 SUPERFAMILY SSF53756 2 324 5.34E-70 T 23-04-2016 RBRH_RS09830 3e7e0ca133f2feb5aa9379b6349a874f 339 PANTHER PTHR30160:SF8 3 309 2.8E-58 T 23-04-2016 RBRH_RS09830 3e7e0ca133f2feb5aa9379b6349a874f 339 PANTHER PTHR30160 3 309 2.8E-58 T 23-04-2016 RBRH_RS09830 3e7e0ca133f2feb5aa9379b6349a874f 339 Gene3D G3DSA:3.40.50.2000 184 317 2.8E-32 T 23-04-2016 RBRH_RS09830 3e7e0ca133f2feb5aa9379b6349a874f 339 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 324 2.2E-48 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RBRH_RS10730 8bd14ecccb598c70df1aa57d4faa3d6a 241 PANTHER PTHR24220:SF317 3 240 6.3E-183 T 23-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 RBRH_RS10730 8bd14ecccb598c70df1aa57d4faa3d6a 241 SMART SM00382 26 213 2.9E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS10730 8bd14ecccb598c70df1aa57d4faa3d6a 241 SUPERFAMILY SSF52540 1 235 8.11E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10730 8bd14ecccb598c70df1aa57d4faa3d6a 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS10730 8bd14ecccb598c70df1aa57d4faa3d6a 241 Pfam PF00005 ABC transporter 17 165 1.9E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS10730 8bd14ecccb598c70df1aa57d4faa3d6a 241 PIRSF PIRSF039085 1 241 9.3E-104 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RBRH_RS10730 8bd14ecccb598c70df1aa57d4faa3d6a 241 Gene3D G3DSA:3.40.50.300 1 236 2.8E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10730 8bd14ecccb598c70df1aa57d4faa3d6a 241 PANTHER PTHR24220 3 240 6.3E-183 T 23-04-2016 RBRH_RS00385 632569b0d53ccadfa2bb2316c9071ca8 405 PANTHER PTHR30012:SF5 2 405 2.3E-159 T 23-04-2016 RBRH_RS00385 632569b0d53ccadfa2bb2316c9071ca8 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 1.6E-167 T 23-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 RBRH_RS00385 632569b0d53ccadfa2bb2316c9071ca8 405 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.0E-26 T 23-04-2016 IPR018076 Type II secretion system F domain RBRH_RS00385 632569b0d53ccadfa2bb2316c9071ca8 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 5.9E-32 T 23-04-2016 IPR018076 Type II secretion system F domain RBRH_RS00385 632569b0d53ccadfa2bb2316c9071ca8 405 PANTHER PTHR30012 2 405 2.3E-159 T 23-04-2016 RBRH_RS00385 632569b0d53ccadfa2bb2316c9071ca8 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 6.3E-30 T 23-04-2016 IPR003004 GspF/PilC family RBRH_RS00385 632569b0d53ccadfa2bb2316c9071ca8 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 6.3E-30 T 23-04-2016 IPR003004 GspF/PilC family RBRH_RS00385 632569b0d53ccadfa2bb2316c9071ca8 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 6.3E-30 T 23-04-2016 IPR003004 GspF/PilC family RBRH_RS00385 632569b0d53ccadfa2bb2316c9071ca8 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 6.3E-30 T 23-04-2016 IPR003004 GspF/PilC family RBRH_RS11010 304d74e90922d0556ed578fa8ff9ff0a 259 PANTHER PTHR24220:SF497 18 255 3.3E-136 T 23-04-2016 RBRH_RS11010 304d74e90922d0556ed578fa8ff9ff0a 259 Gene3D G3DSA:3.40.50.300 16 252 1.4E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11010 304d74e90922d0556ed578fa8ff9ff0a 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 254 3.0E-5 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RBRH_RS11010 304d74e90922d0556ed578fa8ff9ff0a 259 PANTHER PTHR24220 18 255 3.3E-136 T 23-04-2016 RBRH_RS11010 304d74e90922d0556ed578fa8ff9ff0a 259 SMART SM00382 41 249 2.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS11010 304d74e90922d0556ed578fa8ff9ff0a 259 SUPERFAMILY SSF52540 17 255 8.38E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS11010 304d74e90922d0556ed578fa8ff9ff0a 259 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 16 259 2.0E-118 T 23-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 RBRH_RS11010 304d74e90922d0556ed578fa8ff9ff0a 259 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS11010 304d74e90922d0556ed578fa8ff9ff0a 259 Pfam PF00005 ABC transporter 32 184 8.0E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS07935 f65eff3f76be57b4dd05993d36619e43 400 Pfam PF13289 SIR2-like domain 200 358 2.2E-7 T 23-04-2016 RBRH_RS13845 6f95c104f98821e3e70712dbbde4bf85 91 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 46 91 5.4E-6 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RBRH_RS13845 6f95c104f98821e3e70712dbbde4bf85 91 SUPERFAMILY SSF54211 28 91 5.06E-5 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS13845 6f95c104f98821e3e70712dbbde4bf85 91 Gene3D G3DSA:3.30.230.10 40 91 2.3E-6 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS13845 6f95c104f98821e3e70712dbbde4bf85 91 Gene3D G3DSA:3.30.565.10 2 39 2.1E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RBRH_RS02860 12e2a321af495ef369719ddb02b863ca 428 PANTHER PTHR23508:SF14 1 417 8.5E-253 T 23-04-2016 RBRH_RS02860 12e2a321af495ef369719ddb02b863ca 428 Pfam PF00083 Sugar (and other) transporter 17 405 2.7E-24 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RBRH_RS02860 12e2a321af495ef369719ddb02b863ca 428 PANTHER PTHR23508 1 417 8.5E-253 T 23-04-2016 RBRH_RS02860 12e2a321af495ef369719ddb02b863ca 428 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RBRH_RS02860 12e2a321af495ef369719ddb02b863ca 428 Gene3D G3DSA:1.20.1250.20 12 213 2.9E-24 T 23-04-2016 RBRH_RS02860 12e2a321af495ef369719ddb02b863ca 428 Gene3D G3DSA:1.20.1250.20 235 419 1.2E-20 T 23-04-2016 RBRH_RS02860 12e2a321af495ef369719ddb02b863ca 428 SUPERFAMILY SSF103473 12 422 1.26E-62 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS02860 12e2a321af495ef369719ddb02b863ca 428 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RBRH_RS07505 b1ef841f0dd7cb6b9071ddfb89461cac 149 Pfam PF06841 T4-like virus tail tube protein gp19 16 144 2.1E-34 T 23-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 RBRH_RS07505 b1ef841f0dd7cb6b9071ddfb89461cac 149 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 11 146 1.9E-34 T 23-04-2016 IPR011747 Conserved hypothetical protein CHP02241 RBRH_RS07505 b1ef841f0dd7cb6b9071ddfb89461cac 149 PANTHER PTHR38009 6 148 1.8E-13 T 23-04-2016 RBRH_RS07505 b1ef841f0dd7cb6b9071ddfb89461cac 149 PANTHER PTHR38009:SF1 6 148 1.8E-13 T 23-04-2016 RBRH_RS11080 713fe820aa677607b13937364c5b9201 205 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 173 9.9E-46 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RBRH_RS11080 713fe820aa677607b13937364c5b9201 205 Gene3D G3DSA:2.170.120.20 96 193 1.5E-28 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain RBRH_RS11080 713fe820aa677607b13937364c5b9201 205 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 93 2.0E-41 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RBRH_RS11080 713fe820aa677607b13937364c5b9201 205 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 185 7.5E-29 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain RBRH_RS11080 713fe820aa677607b13937364c5b9201 205 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 93 21.512 T 23-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RBRH_RS11080 713fe820aa677607b13937364c5b9201 205 Pfam PF01386 Ribosomal L25p family 5 90 7.1E-24 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RBRH_RS11080 713fe820aa677607b13937364c5b9201 205 PANTHER PTHR33284 5 205 1.3E-56 T 23-04-2016 RBRH_RS11080 713fe820aa677607b13937364c5b9201 205 Gene3D G3DSA:2.40.240.10 2 93 4.8E-32 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RBRH_RS11080 713fe820aa677607b13937364c5b9201 205 SUPERFAMILY SSF50715 2 192 1.27E-54 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RBRH_RS11080 713fe820aa677607b13937364c5b9201 205 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 184 30.977 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RBRH_RS10920 41775fd09bd9406a1c2ab75d90e1bc7f 532 SUPERFAMILY SSF103473 24 213 1.7E-68 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS10920 41775fd09bd9406a1c2ab75d90e1bc7f 532 SUPERFAMILY SSF103473 491 516 1.7E-68 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS10920 41775fd09bd9406a1c2ab75d90e1bc7f 532 SUPERFAMILY SSF103473 260 431 1.7E-68 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS10920 41775fd09bd9406a1c2ab75d90e1bc7f 532 Gene3D G3DSA:1.20.1250.20 492 514 9.5E-20 T 23-04-2016 RBRH_RS10920 41775fd09bd9406a1c2ab75d90e1bc7f 532 Gene3D G3DSA:1.20.1250.20 276 432 9.5E-20 T 23-04-2016 RBRH_RS10920 41775fd09bd9406a1c2ab75d90e1bc7f 532 Gene3D G3DSA:1.20.1250.20 25 205 1.1E-31 T 23-04-2016 RBRH_RS10920 41775fd09bd9406a1c2ab75d90e1bc7f 532 PANTHER PTHR23501 13 514 3.1E-115 T 23-04-2016 RBRH_RS10920 41775fd09bd9406a1c2ab75d90e1bc7f 532 Pfam PF07690 Major Facilitator Superfamily 27 421 4.4E-50 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 Gene3D G3DSA:3.40.50.980 28 151 1.7E-38 T 23-04-2016 RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 Gene3D G3DSA:3.40.50.980 183 213 1.7E-38 T 23-04-2016 RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 Gene3D G3DSA:2.30.38.10 382 454 1.3E-29 T 23-04-2016 RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 Pfam PF00501 AMP-binding enzyme 30 463 1.4E-102 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 ProSitePatterns PS00455 Putative AMP-binding domain signature. 209 220 - T 23-04-2016 IPR020845 AMP-binding, conserved site RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 Pfam PF13193 AMP-binding enzyme C-terminal domain 472 546 1.2E-15 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 SUPERFAMILY SSF56801 21 556 1.57E-146 T 23-04-2016 RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 Gene3D G3DSA:3.40.50.980 214 381 1.7E-40 T 23-04-2016 RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 PANTHER PTHR24096 180 555 1.6E-161 T 23-04-2016 RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 PANTHER PTHR24096 14 154 1.6E-161 T 23-04-2016 RBRH_RS01230 18cd3c44d71cd3e1438ab6aa40458953 571 Gene3D G3DSA:3.30.300.30 458 554 5.7E-28 T 23-04-2016 RBRH_RS04405 9addb5b809080c3993261d26f60881fe 104 Pfam PF00276 Ribosomal protein L23 13 99 6.4E-30 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04405 9addb5b809080c3993261d26f60881fe 104 Gene3D G3DSA:3.30.70.330 10 101 5.0E-33 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RBRH_RS04405 9addb5b809080c3993261d26f60881fe 104 SUPERFAMILY SSF54189 8 97 1.12E-29 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS04405 9addb5b809080c3993261d26f60881fe 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 22.389 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RBRH_RS04405 9addb5b809080c3993261d26f60881fe 104 PANTHER PTHR11620 5 97 3.4E-24 T 23-04-2016 RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 PIRSF PIRSF002741 12 613 8.9E-91 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 Gene3D G3DSA:3.40.190.10 170 336 7.2E-28 T 23-04-2016 RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 Gene3D G3DSA:3.10.105.10 337 375 3.6E-47 T 23-04-2016 RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 Gene3D G3DSA:3.10.105.10 409 580 3.6E-47 T 23-04-2016 RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 111 524 4.5E-71 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 PANTHER PTHR30290:SF2 406 621 5.6E-151 T 23-04-2016 RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 PANTHER PTHR30290:SF2 1 371 5.6E-151 T 23-04-2016 RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 SUPERFAMILY SSF53850 58 374 1.81E-111 T 23-04-2016 RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 SUPERFAMILY SSF53850 405 612 1.81E-111 T 23-04-2016 RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 PANTHER PTHR30290 406 621 5.6E-151 T 23-04-2016 RBRH_RS05540 46b95f9a2ea797395a3d947912160137 625 PANTHER PTHR30290 1 371 5.6E-151 T 23-04-2016 RBRH_RS03645 662363de227a903e8e5d1302ddee4d4a 282 Gene3D G3DSA:3.40.50.300 33 273 2.2E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03645 662363de227a903e8e5d1302ddee4d4a 282 Pfam PF00005 ABC transporter 51 206 3.0E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS03645 662363de227a903e8e5d1302ddee4d4a 282 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 36 282 7.5E-120 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 RBRH_RS03645 662363de227a903e8e5d1302ddee4d4a 282 PANTHER PTHR24220 37 277 1.1E-167 T 23-04-2016 RBRH_RS03645 662363de227a903e8e5d1302ddee4d4a 282 PANTHER PTHR24220:SF560 37 277 1.1E-167 T 23-04-2016 RBRH_RS03645 662363de227a903e8e5d1302ddee4d4a 282 SMART SM00382 60 270 2.1E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS03645 662363de227a903e8e5d1302ddee4d4a 282 ProSitePatterns PS00211 ABC transporters family signature. 179 193 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS03645 662363de227a903e8e5d1302ddee4d4a 282 SUPERFAMILY SSF52540 34 265 1.42E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 Pfam PF12800 4Fe-4S binding domain 7 23 0.72 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 Gene3D G3DSA:3.30.70.20 4 103 1.7E-23 T 23-04-2016 RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 1.0E-21 T 23-04-2016 IPR022569 Ferredoxin, C-terminal RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 Pfam PF00037 4Fe-4S binding domain 35 56 3.8E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 PANTHER PTHR11938:SF101 1 84 5.7E-41 T 23-04-2016 RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 PANTHER PTHR11938 1 84 5.7E-41 T 23-04-2016 RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 SUPERFAMILY SSF54862 3 100 7.68E-25 T 23-04-2016 RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.0E-14 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.0E-14 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RBRH_RS03200 4bc116c2ab76b5e6852fa647e1d12388 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.0E-14 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RBRH_RS04775 29100d363467122d9408dd483293a87b 249 Gene3D G3DSA:3.20.20.70 1 239 1.7E-91 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS04775 29100d363467122d9408dd483293a87b 249 SUPERFAMILY SSF51366 1 239 1.18E-76 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RBRH_RS04775 29100d363467122d9408dd483293a87b 249 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.58 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RBRH_RS04775 29100d363467122d9408dd483293a87b 249 PANTHER PTHR21235 1 241 3.4E-99 T 23-04-2016 RBRH_RS04775 29100d363467122d9408dd483293a87b 249 Pfam PF00977 Histidine biosynthesis protein 3 232 6.0E-81 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RBRH_RS04775 29100d363467122d9408dd483293a87b 249 PANTHER PTHR21235:SF15 1 241 3.4E-99 T 23-04-2016 RBRH_RS04775 29100d363467122d9408dd483293a87b 249 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 236 1.5E-78 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 32.367 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 SUPERFAMILY SSF54611 2 141 1.44E-50 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 Pfam PF02556 Preprotein translocase subunit SecB 4 143 2.2E-55 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 Gene3D G3DSA:3.10.420.10 2 148 1.2E-60 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 8.1E-31 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 8.1E-31 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 8.1E-31 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 8.1E-31 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 PANTHER PTHR36918:SF1 1 156 2.5E-53 T 23-04-2016 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 140 2.7E-47 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RBRH_RS11250 0b8eb03f5038645c770e9b81b979ef0e 161 PANTHER PTHR36918 1 156 2.5E-53 T 23-04-2016 RBRH_RS06505 2d5862f05b68e3d305df63d6f6db7031 392 PANTHER PTHR30372:SF0 7 384 5.3E-99 T 23-04-2016 RBRH_RS06505 2d5862f05b68e3d305df63d6f6db7031 392 PANTHER PTHR30372 7 384 5.3E-99 T 23-04-2016 RBRH_RS06505 2d5862f05b68e3d305df63d6f6db7031 392 SUPERFAMILY SSF53756 9 383 9.87E-30 T 23-04-2016 RBRH_RS06505 2d5862f05b68e3d305df63d6f6db7031 392 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 380 4.5E-99 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RBRH_RS06505 2d5862f05b68e3d305df63d6f6db7031 392 Gene3D G3DSA:3.40.50.2000 164 292 8.5E-6 T 23-04-2016 RBRH_RS06505 2d5862f05b68e3d305df63d6f6db7031 392 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 7 383 36.339 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RBRH_RS06505 2d5862f05b68e3d305df63d6f6db7031 392 Pfam PF02684 Lipid-A-disaccharide synthetase 11 377 1.6E-96 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RBRH_RS16300 7b5d35ff8a30b0aa567f18c76e002632 78 PANTHER PTHR32294:SF4 15 67 7.9E-18 T 23-04-2016 RBRH_RS16300 7b5d35ff8a30b0aa567f18c76e002632 78 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 15 66 1.8E-9 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RBRH_RS16300 7b5d35ff8a30b0aa567f18c76e002632 78 PANTHER PTHR32294 15 67 7.9E-18 T 23-04-2016 RBRH_RS06945 cab2511db5d35e60eef4cac4238f755d 196 Pfam PF04366 Las17-binding protein actin regulator 109 193 7.7E-12 T 23-04-2016 IPR007461 Ysc84 actin-binding domain RBRH_RS03925 1b16f52327c7e170043a9ec073e6925c 434 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 4 172 9.5E-52 T 23-04-2016 IPR016913 Uncharacterised conserved protein UCP029215 RBRH_RS02405 29d275f807c02721989201d914a5227a 189 PIRSF PIRSF030820 1 180 1.6E-61 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 RBRH_RS02405 29d275f807c02721989201d914a5227a 189 Pfam PF06073 Bacterial protein of unknown function (DUF934) 65 171 4.4E-44 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 RBRH_RS01440 6d6ebb01ae3be214bd5cd7242c1a8e8b 198 PANTHER PTHR33508 1 192 1.0E-63 T 23-04-2016 RBRH_RS01440 6d6ebb01ae3be214bd5cd7242c1a8e8b 198 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 191 5.0E-33 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RBRH_RS01440 6d6ebb01ae3be214bd5cd7242c1a8e8b 198 Pfam PF01914 MarC family integral membrane protein 5 192 1.1E-49 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RBRH_RS01440 6d6ebb01ae3be214bd5cd7242c1a8e8b 198 PANTHER PTHR33508:SF4 1 192 1.0E-63 T 23-04-2016 RBRH_RS03680 bfd174b58dccd5c0299511faf400ff8f 168 Pfam PF01613 Flavin reductase like domain 19 164 7.3E-37 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RBRH_RS03680 bfd174b58dccd5c0299511faf400ff8f 168 PANTHER PTHR30466:SF1 14 165 5.9E-37 T 23-04-2016 RBRH_RS03680 bfd174b58dccd5c0299511faf400ff8f 168 Gene3D G3DSA:2.30.110.10 7 162 6.8E-58 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RBRH_RS03680 bfd174b58dccd5c0299511faf400ff8f 168 SUPERFAMILY SSF50475 9 164 3.34E-49 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RBRH_RS03680 bfd174b58dccd5c0299511faf400ff8f 168 PANTHER PTHR30466 14 165 5.9E-37 T 23-04-2016 RBRH_RS03680 bfd174b58dccd5c0299511faf400ff8f 168 SMART SM00903 18 163 1.0E-61 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RBRH_RS04565 fbeacffc6b14f6adb1e2dbdcbb8cd9fb 400 PANTHER PTHR30071 125 400 1.5E-68 T 23-04-2016 RBRH_RS04565 fbeacffc6b14f6adb1e2dbdcbb8cd9fb 400 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 161 398 8.4E-74 T 23-04-2016 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 RBRH_RS04565 fbeacffc6b14f6adb1e2dbdcbb8cd9fb 400 PANTHER PTHR30071:SF5 125 400 1.5E-68 T 23-04-2016 RBRH_RS04565 fbeacffc6b14f6adb1e2dbdcbb8cd9fb 400 Pfam PF01578 Cytochrome C assembly protein 191 395 4.0E-50 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RBRH_RS05980 80230db151f5f7da9a976994694d0362 100 SUPERFAMILY SSF50249 1 99 9.08E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05980 80230db151f5f7da9a976994694d0362 100 Gene3D G3DSA:2.40.50.140 1 99 1.4E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS05980 80230db151f5f7da9a976994694d0362 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 96 3.2E-31 T 23-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RBRH_RS05980 80230db151f5f7da9a976994694d0362 100 PIRSF PIRSF003135 1 98 1.9E-14 T 23-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RBRH_RS12815 cf1a089cd19b31e701cbc406114f4286 77 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 8 76 2.9E-12 T 23-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative RBRH_RS00880 40e5f4c26ff2d45961cf511010c7c332 176 PANTHER PTHR30529 4 176 1.2E-34 T 23-04-2016 RBRH_RS00880 40e5f4c26ff2d45961cf511010c7c332 176 SUPERFAMILY SSF81342 7 176 5.57E-24 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RBRH_RS00880 40e5f4c26ff2d45961cf511010c7c332 176 PANTHER PTHR30529:SF3 4 176 1.2E-34 T 23-04-2016 RBRH_RS00880 40e5f4c26ff2d45961cf511010c7c332 176 Pfam PF01292 Prokaryotic cytochrome b561 9 176 9.5E-18 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RBRH_RS08230 58b89e6fb545426112d5abfb5eaa1457 245 SUPERFAMILY SSF52540 12 235 1.36E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08230 58b89e6fb545426112d5abfb5eaa1457 245 Gene3D G3DSA:3.40.50.300 11 236 2.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08230 58b89e6fb545426112d5abfb5eaa1457 245 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS08230 58b89e6fb545426112d5abfb5eaa1457 245 PANTHER PTHR24220:SF111 13 237 4.0E-109 T 23-04-2016 RBRH_RS08230 58b89e6fb545426112d5abfb5eaa1457 245 SMART SM00382 40 228 2.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS08230 58b89e6fb545426112d5abfb5eaa1457 245 PANTHER PTHR24220 13 237 4.0E-109 T 23-04-2016 RBRH_RS08230 58b89e6fb545426112d5abfb5eaa1457 245 Pfam PF00005 ABC transporter 32 179 4.6E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS05145 5f80586b759c37798843487bd2b10646 57 PANTHER PTHR33609 2 57 3.4E-17 T 23-04-2016 RBRH_RS05145 5f80586b759c37798843487bd2b10646 57 Pfam PF01527 Transposase 4 55 1.2E-10 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS04910 c39d04dacf3a1e43f16c6ae29695a69b 191 Pfam PF07209 Protein of unknown function (DUF1415) 13 181 1.4E-67 T 23-04-2016 IPR009858 Protein of unknown function DUF1415 RBRH_RS10230 6a4185cd5e1b32810137ee6580fbf2b1 148 Gene3D G3DSA:3.10.450.50 8 134 5.5E-16 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS10230 6a4185cd5e1b32810137ee6580fbf2b1 148 Pfam PF13474 SnoaL-like domain 13 129 7.7E-20 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RBRH_RS10230 6a4185cd5e1b32810137ee6580fbf2b1 148 SUPERFAMILY SSF54427 2 130 2.11E-21 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS01980 2bd9c5aee5fd95507c64b91d80df361d 529 Pfam PF02384 N-6 DNA Methylase 71 180 2.5E-5 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RBRH_RS01980 2bd9c5aee5fd95507c64b91d80df361d 529 Gene3D G3DSA:3.40.50.150 78 295 1.1E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01980 2bd9c5aee5fd95507c64b91d80df361d 529 SUPERFAMILY SSF53335 54 295 3.89E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS01980 2bd9c5aee5fd95507c64b91d80df361d 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 168 180 7.4E-9 T 23-04-2016 RBRH_RS01980 2bd9c5aee5fd95507c64b91d80df361d 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 115 7.4E-9 T 23-04-2016 RBRH_RS01980 2bd9c5aee5fd95507c64b91d80df361d 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 76 92 7.4E-9 T 23-04-2016 RBRH_RS09525 568e4e67932a8d648ea6ce810f40b389 466 Pfam PF02417 Chromate transporter 81 243 5.9E-18 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RBRH_RS09525 568e4e67932a8d648ea6ce810f40b389 466 Pfam PF02417 Chromate transporter 302 453 1.2E-22 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RBRH_RS09525 568e4e67932a8d648ea6ce810f40b389 466 PIRSF PIRSF004810 64 464 4.1E-74 T 23-04-2016 IPR014047 Chromate transporter, long chain RBRH_RS09525 568e4e67932a8d648ea6ce810f40b389 466 PANTHER PTHR33567 50 465 3.6E-33 T 23-04-2016 RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 SUPERFAMILY SSF52440 11 120 9.21E-32 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 Gene3D G3DSA:3.30.470.20 208 403 1.5E-71 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 21 404 1.6E-175 T 23-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 Gene3D G3DSA:3.30.1490.20 131 207 1.5E-24 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 SUPERFAMILY SSF51246 334 404 3.06E-19 T 23-04-2016 IPR011054 Rudiment single hybrid motif RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 PANTHER PTHR11609 1 403 1.1E-197 T 23-04-2016 RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 Gene3D G3DSA:3.40.50.20 12 128 1.7E-37 T 23-04-2016 IPR016185 Pre-ATP-grasp domain RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 15 406 51.915 T 23-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 PANTHER PTHR11609:SF7 1 403 1.1E-197 T 23-04-2016 RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 SUPERFAMILY SSF56059 121 328 7.6E-56 T 23-04-2016 RBRH_RS09335 1cdf65b722d8340ed8a90fb0fdda09ee 410 Pfam PF02222 ATP-grasp domain 131 309 8.5E-52 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 RBRH_RS03240 e84588e69556d363ca1d82a9a8624654 224 PANTHER PTHR19136:SF81 5 220 6.6E-31 T 23-04-2016 RBRH_RS03240 e84588e69556d363ca1d82a9a8624654 224 SUPERFAMILY SSF53448 6 214 2.7E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS03240 e84588e69556d363ca1d82a9a8624654 224 Pfam PF12804 MobA-like NTP transferase domain 8 189 3.7E-28 T 23-04-2016 IPR025877 MobA-like NTP transferase RBRH_RS03240 e84588e69556d363ca1d82a9a8624654 224 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 214 1.2E-60 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RBRH_RS03240 e84588e69556d363ca1d82a9a8624654 224 PANTHER PTHR19136 5 220 6.6E-31 T 23-04-2016 RBRH_RS03240 e84588e69556d363ca1d82a9a8624654 224 Gene3D G3DSA:3.90.550.10 4 219 2.4E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS03240 e84588e69556d363ca1d82a9a8624654 224 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 217 27.357 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RBRH_RS01080 f0cfc7d46252ee5d17336ae3a43220e8 442 PANTHER PTHR12526 3 418 2.0E-81 T 23-04-2016 RBRH_RS01080 f0cfc7d46252ee5d17336ae3a43220e8 442 Pfam PF00534 Glycosyl transferases group 1 209 385 5.4E-42 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RBRH_RS01080 f0cfc7d46252ee5d17336ae3a43220e8 442 Pfam PF13439 Glycosyltransferase Family 4 23 200 3.9E-28 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RBRH_RS01080 f0cfc7d46252ee5d17336ae3a43220e8 442 Gene3D G3DSA:3.40.50.2000 186 386 4.1E-42 T 23-04-2016 RBRH_RS01080 f0cfc7d46252ee5d17336ae3a43220e8 442 SUPERFAMILY SSF53756 1 407 1.78E-90 T 23-04-2016 RBRH_RS01120 b1f9017d8d924e246f8d6e2ef3b6a882 215 PANTHER PTHR30086 1 212 2.8E-45 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RBRH_RS01120 b1f9017d8d924e246f8d6e2ef3b6a882 215 PIRSF PIRSF006324 1 215 6.6E-68 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RBRH_RS01120 b1f9017d8d924e246f8d6e2ef3b6a882 215 Pfam PF01810 LysE type translocator 15 211 2.9E-32 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RBRH_RS06275 75009a4576b8c5d5d4eae13278dcb645 157 PANTHER PTHR36919 1 157 3.3E-41 T 23-04-2016 RBRH_RS06275 75009a4576b8c5d5d4eae13278dcb645 157 PANTHER PTHR36919:SF1 1 157 3.3E-41 T 23-04-2016 RBRH_RS06275 75009a4576b8c5d5d4eae13278dcb645 157 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 37 155 9.9E-33 T 23-04-2016 IPR019223 Domain of unknown function DUF2147 RBRH_RS04940 b210bd7174ed32fa3be0cd0ca22bcd00 532 Pfam PF13520 Amino acid permease 9 426 3.1E-55 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RBRH_RS04940 b210bd7174ed32fa3be0cd0ca22bcd00 532 PANTHER PTHR11785 2 459 8.9E-155 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RBRH_RS04940 b210bd7174ed32fa3be0cd0ca22bcd00 532 PANTHER PTHR11785 513 525 8.9E-155 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RBRH_RS04940 b210bd7174ed32fa3be0cd0ca22bcd00 532 PANTHER PTHR11785:SF322 2 459 8.9E-155 T 23-04-2016 RBRH_RS04940 b210bd7174ed32fa3be0cd0ca22bcd00 532 PANTHER PTHR11785:SF322 513 525 8.9E-155 T 23-04-2016 RBRH_RS04940 b210bd7174ed32fa3be0cd0ca22bcd00 532 PIRSF PIRSF006060 2 526 5.6E-78 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RBRH_RS07570 f94e8daecf1f903cf6ad3fd6c5ac90fb 149 PANTHER PTHR26402:SF102 7 131 2.3E-29 T 23-04-2016 RBRH_RS07570 f94e8daecf1f903cf6ad3fd6c5ac90fb 149 SMART SM00448 7 128 3.2E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS07570 f94e8daecf1f903cf6ad3fd6c5ac90fb 149 Gene3D G3DSA:3.40.50.2300 5 131 3.6E-32 T 23-04-2016 RBRH_RS07570 f94e8daecf1f903cf6ad3fd6c5ac90fb 149 SUPERFAMILY SSF52172 6 131 2.56E-27 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS07570 f94e8daecf1f903cf6ad3fd6c5ac90fb 149 Pfam PF00072 Response regulator receiver domain 9 128 1.0E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS07570 f94e8daecf1f903cf6ad3fd6c5ac90fb 149 PANTHER PTHR26402 7 131 2.3E-29 T 23-04-2016 RBRH_RS03885 b74dd616991346a0212e4ad8ded92b3b 85 SUPERFAMILY SSF47598 3 42 2.76E-9 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RBRH_RS03885 b74dd616991346a0212e4ad8ded92b3b 85 Pfam PF05509 TraY domain 4 50 7.7E-6 T 23-04-2016 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 RBRH_RS00645 1cdd314d6f4d082bed9e9b74841e0b46 169 Pfam PF00583 Acetyltransferase (GNAT) family 53 145 6.7E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RBRH_RS00645 1cdd314d6f4d082bed9e9b74841e0b46 169 PANTHER PTHR36449 1 169 5.5E-42 T 23-04-2016 RBRH_RS00645 1cdd314d6f4d082bed9e9b74841e0b46 169 SUPERFAMILY SSF55729 19 150 1.28E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS00645 1cdd314d6f4d082bed9e9b74841e0b46 169 Gene3D G3DSA:3.40.630.30 18 148 1.8E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS09345 6244eb8c3cb1660b3e9b2158ee0ef8bc 164 Gene3D G3DSA:2.130.10.10 26 160 3.9E-31 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RBRH_RS09345 6244eb8c3cb1660b3e9b2158ee0ef8bc 164 PANTHER PTHR30344 47 159 1.5E-31 T 23-04-2016 RBRH_RS09345 6244eb8c3cb1660b3e9b2158ee0ef8bc 164 PANTHER PTHR30344:SF1 47 159 1.5E-31 T 23-04-2016 RBRH_RS09345 6244eb8c3cb1660b3e9b2158ee0ef8bc 164 SUPERFAMILY SSF51004 45 159 1.14E-17 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RBRH_RS09345 6244eb8c3cb1660b3e9b2158ee0ef8bc 164 Pfam PF10282 Lactonase, 7-bladed beta-propeller 37 160 5.7E-37 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RBRH_RS10265 37a158d302b8dca7535ccf1852578d8d 156 PANTHER PTHR30060 14 130 6.6E-15 T 23-04-2016 RBRH_RS10265 37a158d302b8dca7535ccf1852578d8d 156 Pfam PF03741 Integral membrane protein TerC family 1 108 6.0E-22 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RBRH_RS02195 87f96e7095d2ecd6c69fbac394d9fbb8 164 Pfam PF02643 Uncharacterized ACR, COG1430 57 157 1.0E-30 T 23-04-2016 IPR003795 Protein of unknown function DUF192 RBRH_RS02195 87f96e7095d2ecd6c69fbac394d9fbb8 164 PANTHER PTHR37953:SF1 3 157 1.1E-29 T 23-04-2016 RBRH_RS02195 87f96e7095d2ecd6c69fbac394d9fbb8 164 PANTHER PTHR37953 3 157 1.1E-29 T 23-04-2016 RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 1 298 27.294 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 Pfam PF08241 Methyltransferase domain 44 170 3.4E-16 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 PANTHER PTHR13090:SF3 109 297 1.0E-34 T 23-04-2016 RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 SUPERFAMILY SSF53335 4 81 1.92E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 SUPERFAMILY SSF53335 118 233 1.92E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 SUPERFAMILY SSF53335 267 298 1.92E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 Gene3D G3DSA:3.40.50.150 115 298 2.6E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 Gene3D G3DSA:3.40.50.150 6 81 2.6E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 PANTHER PTHR13090 2 80 1.0E-34 T 23-04-2016 RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 PANTHER PTHR13090:SF3 2 80 1.0E-34 T 23-04-2016 RBRH_RS11230 2d2df2dcb010a60d2c1895a536b3042e 328 PANTHER PTHR13090 109 297 1.0E-34 T 23-04-2016 RBRH_RS09810 f0de5fe56f0e7a3a105f1ee1f575767f 107 Gene3D G3DSA:3.40.250.10 2 106 3.4E-31 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS09810 f0de5fe56f0e7a3a105f1ee1f575767f 107 SUPERFAMILY SSF52821 2 105 1.02E-29 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS09810 f0de5fe56f0e7a3a105f1ee1f575767f 107 Pfam PF00581 Rhodanese-like domain 9 98 6.5E-16 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS09810 f0de5fe56f0e7a3a105f1ee1f575767f 107 PANTHER PTHR10657:SF12 23 107 1.5E-14 T 23-04-2016 RBRH_RS09810 f0de5fe56f0e7a3a105f1ee1f575767f 107 SMART SM00450 7 102 3.5E-21 T 23-04-2016 IPR001763 Rhodanese-like domain RBRH_RS09810 f0de5fe56f0e7a3a105f1ee1f575767f 107 PANTHER PTHR10657 23 107 1.5E-14 T 23-04-2016 RBRH_RS03185 dab811ba8e88901aa4a41ca23bcc9598 241 Pfam PF00872 Transposase, Mutator family 1 73 3.3E-19 T 23-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RBRH_RS03185 dab811ba8e88901aa4a41ca23bcc9598 241 PANTHER PTHR33217 1 130 6.3E-33 T 23-04-2016 RBRH_RS11390 2869a9fc6007de63604cf3ef7599f31c 319 PANTHER PTHR36698:SF2 2 319 1.1E-42 T 23-04-2016 RBRH_RS11390 2869a9fc6007de63604cf3ef7599f31c 319 PANTHER PTHR36698 2 319 1.1E-42 T 23-04-2016 RBRH_RS11390 2869a9fc6007de63604cf3ef7599f31c 319 Pfam PF02470 MlaD protein 38 113 7.0E-10 T 23-04-2016 IPR003399 Mce/MlaD RBRH_RS11205 91a35f6ccd633a2f02993085ab89ddfc 285 PANTHER PTHR11403 1 285 3.0E-95 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RBRH_RS11205 91a35f6ccd633a2f02993085ab89ddfc 285 Pfam PF00510 Cytochrome c oxidase subunit III 10 284 1.8E-56 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RBRH_RS11205 91a35f6ccd633a2f02993085ab89ddfc 285 Gene3D G3DSA:1.20.120.80 77 285 1.2E-65 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RBRH_RS11205 91a35f6ccd633a2f02993085ab89ddfc 285 PANTHER PTHR11403:SF0 1 285 3.0E-95 T 23-04-2016 RBRH_RS11205 91a35f6ccd633a2f02993085ab89ddfc 285 SUPERFAMILY SSF81452 8 285 1.26E-78 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RBRH_RS11205 91a35f6ccd633a2f02993085ab89ddfc 285 Gene3D G3DSA:1.10.287.70 6 72 5.6E-14 T 23-04-2016 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 PANTHER PTHR10755 35 331 5.7E-151 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 PIRSF PIRSF000166 30 331 2.4E-114 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 29 306 51.985 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 195 219 - T 23-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 Gene3D G3DSA:3.40.1500.10 35 331 1.7E-120 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 Pfam PF01218 Coproporphyrinogen III oxidase 35 331 8.6E-119 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 SUPERFAMILY SSF102886 34 331 6.54E-125 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 PRINTS PR00073 Coprogen oxidase signature 154 176 8.7E-73 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 PRINTS PR00073 Coprogen oxidase signature 119 143 8.7E-73 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 PRINTS PR00073 Coprogen oxidase signature 263 290 8.7E-73 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 PRINTS PR00073 Coprogen oxidase signature 77 98 8.7E-73 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 PRINTS PR00073 Coprogen oxidase signature 291 317 8.7E-73 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS09240 ed8ffc439fd73b8a8815c953f4a80058 331 PRINTS PR00073 Coprogen oxidase signature 191 220 8.7E-73 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RBRH_RS05610 66ecff4ef0882fecdbbc048f63e80201 98 Gene3D G3DSA:1.10.260.40 35 90 5.7E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS05610 66ecff4ef0882fecdbbc048f63e80201 98 PANTHER PTHR40275:SF1 1 97 2.8E-26 T 23-04-2016 RBRH_RS05610 66ecff4ef0882fecdbbc048f63e80201 98 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 5 91 9.7E-35 T 23-04-2016 IPR014057 Addiction module antidote protein, HI1420 RBRH_RS05610 66ecff4ef0882fecdbbc048f63e80201 98 PANTHER PTHR40275 1 97 2.8E-26 T 23-04-2016 RBRH_RS05610 66ecff4ef0882fecdbbc048f63e80201 98 SUPERFAMILY SSF47413 29 90 2.36E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RBRH_RS05415 ef3e347a7cf2987e5b4567382111243d 113 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 22 111 1.3E-37 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RBRH_RS05415 ef3e347a7cf2987e5b4567382111243d 113 SUPERFAMILY SSF54534 3 113 3.93E-48 T 23-04-2016 RBRH_RS05415 ef3e347a7cf2987e5b4567382111243d 113 PANTHER PTHR10516 4 113 4.8E-64 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RBRH_RS05415 ef3e347a7cf2987e5b4567382111243d 113 Gene3D G3DSA:3.10.50.40 3 113 1.5E-52 T 23-04-2016 RBRH_RS08270 8b43a485763ac3f124d3f90e0f28025e 65 PIRSF PIRSF039003 1 64 1.2E-34 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RBRH_RS08270 8b43a485763ac3f124d3f90e0f28025e 65 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 4.4E-34 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RBRH_RS08270 8b43a485763ac3f124d3f90e0f28025e 65 Pfam PF04384 Iron-sulphur cluster assembly 1 63 2.9E-33 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RBRH_RS08270 8b43a485763ac3f124d3f90e0f28025e 65 Gene3D G3DSA:1.10.10.600 1 63 9.7E-34 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RBRH_RS08270 8b43a485763ac3f124d3f90e0f28025e 65 PANTHER PTHR37532 1 64 5.0E-28 T 23-04-2016 RBRH_RS08270 8b43a485763ac3f124d3f90e0f28025e 65 PANTHER PTHR37532:SF1 1 64 5.0E-28 T 23-04-2016 RBRH_RS08270 8b43a485763ac3f124d3f90e0f28025e 65 SUPERFAMILY SSF140319 1 62 9.94E-28 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RBRH_RS07810 b79c335fe0b73159e38f6422de5952d8 356 Gene3D G3DSA:1.10.600.10 13 345 5.8E-67 T 23-04-2016 IPR008949 Isoprenoid synthase domain RBRH_RS07810 b79c335fe0b73159e38f6422de5952d8 356 SUPERFAMILY SSF48576 13 338 1.21E-52 T 23-04-2016 IPR008949 Isoprenoid synthase domain RBRH_RS07810 b79c335fe0b73159e38f6422de5952d8 356 PANTHER PTHR11626:SF4 13 345 5.4E-23 T 23-04-2016 RBRH_RS07810 b79c335fe0b73159e38f6422de5952d8 356 Pfam PF00494 Squalene/phytoene synthase 14 312 4.5E-55 T 23-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 RBRH_RS07810 b79c335fe0b73159e38f6422de5952d8 356 PANTHER PTHR11626 13 345 5.4E-23 T 23-04-2016 RBRH_RS01330 5146b45ebaabb4dd5460edb23992cc85 159 Pfam PF05258 Protein of unknown function (DUF721) 20 103 2.9E-9 T 23-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 RBRH_RS10305 363987e381d30f351d3c4ff427509634 141 SUPERFAMILY SSF88723 2 137 3.27E-15 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS10305 363987e381d30f351d3c4ff427509634 141 Gene3D G3DSA:3.40.50.1010 1 139 7.8E-14 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS10305 363987e381d30f351d3c4ff427509634 141 Pfam PF01850 PIN domain 3 132 9.3E-13 T 23-04-2016 IPR002716 PIN domain RBRH_RS11505 d55265768e61b06268547f9141d67e78 142 SUPERFAMILY SSF46955 4 115 1.76E-25 T 23-04-2016 IPR009061 Putative DNA-binding domain RBRH_RS11505 d55265768e61b06268547f9141d67e78 142 Gene3D G3DSA:1.10.1660.10 3 60 2.2E-21 T 23-04-2016 RBRH_RS11505 d55265768e61b06268547f9141d67e78 142 Gene3D G3DSA:1.10.1660.10 61 127 7.7E-15 T 23-04-2016 RBRH_RS11505 d55265768e61b06268547f9141d67e78 142 Pfam PF13411 MerR HTH family regulatory protein 5 73 1.6E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS11505 d55265768e61b06268547f9141d67e78 142 SMART SM00422 5 75 3.3E-19 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RBRH_RS11505 d55265768e61b06268547f9141d67e78 142 PANTHER PTHR30204 1 125 1.2E-17 T 23-04-2016 RBRH_RS11500 18aaec4a394fa2617fd779d32c3c3d4e 360 SUPERFAMILY SSF56281 15 355 9.96E-67 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS11500 18aaec4a394fa2617fd779d32c3c3d4e 360 Pfam PF00753 Metallo-beta-lactamase superfamily 56 271 7.7E-22 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS11500 18aaec4a394fa2617fd779d32c3c3d4e 360 PANTHER PTHR11935:SF109 162 298 1.2E-37 T 23-04-2016 RBRH_RS11500 18aaec4a394fa2617fd779d32c3c3d4e 360 PANTHER PTHR11935:SF109 14 126 1.2E-37 T 23-04-2016 RBRH_RS11500 18aaec4a394fa2617fd779d32c3c3d4e 360 PANTHER PTHR11935 162 298 1.2E-37 T 23-04-2016 RBRH_RS11500 18aaec4a394fa2617fd779d32c3c3d4e 360 PANTHER PTHR11935 14 126 1.2E-37 T 23-04-2016 RBRH_RS11500 18aaec4a394fa2617fd779d32c3c3d4e 360 Gene3D G3DSA:3.60.15.10 13 302 1.2E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS11500 18aaec4a394fa2617fd779d32c3c3d4e 360 SMART SM00849 42 271 4.5E-18 T 23-04-2016 IPR001279 Metallo-beta-lactamase RBRH_RS09305 7be13cafc25ac2ae32b3d4ed21320a8c 307 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 40 266 6.5E-23 T 23-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system RBRH_RS10185 f87fe12667b76a75cd125717b9697864 298 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 294 3.5E-79 T 23-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RBRH_RS10185 f87fe12667b76a75cd125717b9697864 298 Gene3D G3DSA:3.30.470.20 118 248 1.7E-54 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RBRH_RS10185 f87fe12667b76a75cd125717b9697864 298 PANTHER PTHR11609:SF6 10 293 2.6E-143 T 23-04-2016 RBRH_RS10185 f87fe12667b76a75cd125717b9697864 298 Gene3D G3DSA:3.30.200.20 5 117 2.7E-43 T 23-04-2016 RBRH_RS10185 f87fe12667b76a75cd125717b9697864 298 PANTHER PTHR11609 10 293 2.6E-143 T 23-04-2016 RBRH_RS10185 f87fe12667b76a75cd125717b9697864 298 ProSitePatterns PS01058 SAICAR synthetase signature 2. 205 213 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RBRH_RS10185 f87fe12667b76a75cd125717b9697864 298 Pfam PF01259 SAICAR synthetase 16 268 8.1E-102 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RBRH_RS10185 f87fe12667b76a75cd125717b9697864 298 ProSitePatterns PS01057 SAICAR synthetase signature 1. 106 120 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RBRH_RS10185 f87fe12667b76a75cd125717b9697864 298 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 293 25.766 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RBRH_RS10185 f87fe12667b76a75cd125717b9697864 298 SUPERFAMILY SSF56104 5 295 1.54E-104 T 23-04-2016 RBRH_RS02080 0e7f32be94e9f991932047d16424b384 88 SUPERFAMILY SSF46689 1 70 2.15E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS02080 0e7f32be94e9f991932047d16424b384 88 Pfam PF01527 Transposase 2 70 2.7E-19 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS02080 0e7f32be94e9f991932047d16424b384 88 Gene3D G3DSA:1.10.10.60 10 85 9.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS02080 0e7f32be94e9f991932047d16424b384 88 PANTHER PTHR33609 2 87 9.4E-28 T 23-04-2016 RBRH_RS00610 c01a486b80d02f18ea911d61ec05ba69 126 Gene3D G3DSA:2.40.50.100 6 124 4.0E-47 T 23-04-2016 RBRH_RS00610 c01a486b80d02f18ea911d61ec05ba69 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 30.348 T 23-04-2016 IPR002930 Glycine cleavage system H-protein RBRH_RS00610 c01a486b80d02f18ea911d61ec05ba69 126 PANTHER PTHR11715:SF12 1 124 8.1E-60 T 23-04-2016 RBRH_RS00610 c01a486b80d02f18ea911d61ec05ba69 126 SUPERFAMILY SSF51230 3 124 3.27E-41 T 23-04-2016 IPR011053 Single hybrid motif RBRH_RS00610 c01a486b80d02f18ea911d61ec05ba69 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 122 4.6E-46 T 23-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 RBRH_RS00610 c01a486b80d02f18ea911d61ec05ba69 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RBRH_RS00610 c01a486b80d02f18ea911d61ec05ba69 126 Pfam PF01597 Glycine cleavage H-protein 7 122 5.4E-44 T 23-04-2016 IPR002930 Glycine cleavage system H-protein RBRH_RS00610 c01a486b80d02f18ea911d61ec05ba69 126 PANTHER PTHR11715 1 124 8.1E-60 T 23-04-2016 IPR002930 Glycine cleavage system H-protein RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 6.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 6.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 6.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 6.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 6.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 Gene3D G3DSA:3.40.50.720 13 233 6.0E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 Pfam PF00106 short chain dehydrogenase 15 201 2.3E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PANTHER PTHR24322 19 147 6.6E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PANTHER PTHR24322 163 199 6.6E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 SUPERFAMILY SSF51735 12 242 4.94E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 197 0.0027 T 23-04-2016 RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 1.6E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.6E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS01030 4a0df7f948af99334902ed8a1cd7042e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.6E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RBRH_RS02280 6c49dc63e985c3f4e8e1e99c2400a5ee 457 SUPERFAMILY SSF82689 338 434 4.18E-21 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RBRH_RS02280 6c49dc63e985c3f4e8e1e99c2400a5ee 457 SUPERFAMILY SSF50182 266 331 4.25E-15 T 23-04-2016 IPR010920 LSM domain RBRH_RS02280 6c49dc63e985c3f4e8e1e99c2400a5ee 457 Gene3D G3DSA:3.30.70.100 340 421 5.7E-17 T 23-04-2016 RBRH_RS02280 6c49dc63e985c3f4e8e1e99c2400a5ee 457 PANTHER PTHR30347 29 455 1.4E-58 T 23-04-2016 RBRH_RS02280 6c49dc63e985c3f4e8e1e99c2400a5ee 457 Gene3D G3DSA:2.30.30.60 282 329 2.5E-13 T 23-04-2016 RBRH_RS02280 6c49dc63e985c3f4e8e1e99c2400a5ee 457 SUPERFAMILY SSF82861 184 264 2.48E-9 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RBRH_RS02280 6c49dc63e985c3f4e8e1e99c2400a5ee 457 Pfam PF00924 Mechanosensitive ion channel 228 422 6.9E-44 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RBRH_RS06305 a95c28a0faeaf46d120ae5c6540f3ba1 169 PANTHER PTHR30565 1 169 1.4E-89 T 23-04-2016 RBRH_RS06305 a95c28a0faeaf46d120ae5c6540f3ba1 169 PANTHER PTHR30565:SF1 1 169 1.4E-89 T 23-04-2016 RBRH_RS06305 a95c28a0faeaf46d120ae5c6540f3ba1 169 Pfam PF05974 Domain of unknown function (DUF892) 4 157 4.3E-46 T 23-04-2016 IPR010287 Domain of unknown function DUF892 RBRH_RS06305 a95c28a0faeaf46d120ae5c6540f3ba1 169 Gene3D G3DSA:1.20.1260.10 1 160 4.4E-52 T 23-04-2016 IPR012347 Ferritin-related RBRH_RS06305 a95c28a0faeaf46d120ae5c6540f3ba1 169 SUPERFAMILY SSF47240 1 150 1.55E-44 T 23-04-2016 IPR009078 Ferritin-like superfamily RBRH_RS10840 2bbd865b9702e6920d3952b0b2472eb7 525 Gene3D G3DSA:3.90.1200.10 252 318 1.9E-4 T 23-04-2016 RBRH_RS10840 2bbd865b9702e6920d3952b0b2472eb7 525 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 441 1.4E-167 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RBRH_RS10840 2bbd865b9702e6920d3952b0b2472eb7 525 Pfam PF03109 ABC1 family 107 229 1.6E-31 T 23-04-2016 IPR004147 UbiB domain RBRH_RS10840 2bbd865b9702e6920d3952b0b2472eb7 525 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 518 51.172 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RBRH_RS10840 2bbd865b9702e6920d3952b0b2472eb7 525 PANTHER PTHR10566:SF79 2 439 5.9E-219 T 23-04-2016 RBRH_RS10840 2bbd865b9702e6920d3952b0b2472eb7 525 SUPERFAMILY SSF56112 191 435 3.51E-39 T 23-04-2016 IPR011009 Protein kinase-like domain RBRH_RS10840 2bbd865b9702e6920d3952b0b2472eb7 525 SUPERFAMILY SSF56112 89 156 3.51E-39 T 23-04-2016 IPR011009 Protein kinase-like domain RBRH_RS10840 2bbd865b9702e6920d3952b0b2472eb7 525 PANTHER PTHR10566 2 439 5.9E-219 T 23-04-2016 RBRH_RS00185 c5484de09ca5c850cafcda385858a23a 402 Pfam PF00664 ABC transporter transmembrane region 3 115 1.7E-6 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS00185 c5484de09ca5c850cafcda385858a23a 402 PANTHER PTHR24221 10 397 8.1E-127 T 23-04-2016 RBRH_RS00185 c5484de09ca5c850cafcda385858a23a 402 Gene3D G3DSA:3.40.50.300 158 389 3.7E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00185 c5484de09ca5c850cafcda385858a23a 402 Gene3D G3DSA:1.20.1560.10 5 129 1.0E-16 T 23-04-2016 RBRH_RS00185 c5484de09ca5c850cafcda385858a23a 402 SUPERFAMILY SSF52540 157 395 1.41E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00185 c5484de09ca5c850cafcda385858a23a 402 ProSitePatterns PS00211 ABC transporters family signature. 297 311 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RBRH_RS00185 c5484de09ca5c850cafcda385858a23a 402 Pfam PF00005 ABC transporter 176 324 5.1E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RBRH_RS00185 c5484de09ca5c850cafcda385858a23a 402 SMART SM00382 185 377 5.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS00185 c5484de09ca5c850cafcda385858a23a 402 SUPERFAMILY SSF90123 301 309 6.54E-18 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS00185 c5484de09ca5c850cafcda385858a23a 402 SUPERFAMILY SSF90123 4 126 6.54E-18 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RBRH_RS11130 31d6129e1eddf043f2ae03475abab0ab 77 Gene3D G3DSA:3.10.450.50 2 74 4.1E-11 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS11130 31d6129e1eddf043f2ae03475abab0ab 77 SUPERFAMILY SSF54427 2 73 2.97E-8 T 23-04-2016 IPR032710 NTF2-like domain RBRH_RS16215 b4afd0c40c3c520c67fa5d9c1179a14a 93 SUPERFAMILY SSF49482 5 64 4.32E-8 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RBRH_RS16215 b4afd0c40c3c520c67fa5d9c1179a14a 93 Gene3D G3DSA:2.60.130.10 5 61 9.9E-9 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RBRH_RS16215 b4afd0c40c3c520c67fa5d9c1179a14a 93 Pfam PF00775 Dioxygenase 4 62 8.3E-9 T 23-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RBRH_RS06090 6ba74081cc386df6ebf7fc408faf5341 164 SUPERFAMILY SSF54690 3 148 1.2E-52 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS06090 6ba74081cc386df6ebf7fc408faf5341 164 PANTHER PTHR23404:SF2 22 164 2.3E-39 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS06090 6ba74081cc386df6ebf7fc408faf5341 164 PANTHER PTHR23404 22 164 2.3E-39 T 23-04-2016 RBRH_RS06090 6ba74081cc386df6ebf7fc408faf5341 164 Pfam PF02391 MoaE protein 6 118 5.3E-37 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS06090 6ba74081cc386df6ebf7fc408faf5341 164 Gene3D G3DSA:3.90.1170.40 2 148 9.3E-57 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RBRH_RS05805 5973e1c1e29b34bbe231485b375c77b9 209 Pfam PF09976 Tetratricopeptide repeat-like domain 15 208 3.7E-61 T 23-04-2016 IPR018704 Tetratricopeptide repeat-like domain RBRH_RS05805 5973e1c1e29b34bbe231485b375c77b9 209 PANTHER PTHR38035 1 209 1.8E-29 T 23-04-2016 RBRH_RS05805 5973e1c1e29b34bbe231485b375c77b9 209 PIRSF PIRSF006170 1 209 3.5E-52 T 23-04-2016 IPR026039 Uncharacterised protein family UPF0070 RBRH_RS09260 9096e9308a7cdb3265c8a6c59af029ae 224 Gene3D G3DSA:3.90.950.10 21 220 1.0E-59 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RBRH_RS09260 9096e9308a7cdb3265c8a6c59af029ae 224 Pfam PF02545 Maf-like protein 22 218 5.5E-49 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RBRH_RS09260 9096e9308a7cdb3265c8a6c59af029ae 224 SUPERFAMILY SSF52972 20 217 1.57E-51 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RBRH_RS09260 9096e9308a7cdb3265c8a6c59af029ae 224 Hamap MF_00528 Septum formation protein Maf [maf]. 21 223 29.174 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RBRH_RS09260 9096e9308a7cdb3265c8a6c59af029ae 224 PIRSF PIRSF006305 16 223 1.0E-46 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RBRH_RS09260 9096e9308a7cdb3265c8a6c59af029ae 224 TIGRFAM TIGR00172 maf: septum formation protein Maf 22 217 6.5E-45 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 RBRH_RS04400 f548ea4269f1c421c9abc7d850282e9f 206 PANTHER PTHR10746 1 205 7.5E-66 T 23-04-2016 IPR013005 50S ribosomal protein uL4 RBRH_RS04400 f548ea4269f1c421c9abc7d850282e9f 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.647 T 23-04-2016 IPR013005 50S ribosomal protein uL4 RBRH_RS04400 f548ea4269f1c421c9abc7d850282e9f 206 Gene3D G3DSA:3.40.1370.10 58 205 2.6E-51 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RBRH_RS04400 f548ea4269f1c421c9abc7d850282e9f 206 SUPERFAMILY SSF52166 1 205 3.79E-66 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RBRH_RS04400 f548ea4269f1c421c9abc7d850282e9f 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 203 6.2E-68 T 23-04-2016 IPR013005 50S ribosomal protein uL4 RBRH_RS04400 f548ea4269f1c421c9abc7d850282e9f 206 Pfam PF00573 Ribosomal protein L4/L1 family 19 203 9.0E-59 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RBRH_RS11305 5f5f1362c821ba7bd6034d0b23a759fc 429 Pfam PF08886 Glutamate-cysteine ligase 17 419 3.0E-192 T 23-04-2016 IPR011718 Glutamate--cysteine ligase GshA RBRH_RS11305 5f5f1362c821ba7bd6034d0b23a759fc 429 SUPERFAMILY SSF56059 273 356 2.29E-5 T 23-04-2016 RBRH_RS11305 5f5f1362c821ba7bd6034d0b23a759fc 429 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 422 9.6E-190 T 23-04-2016 IPR011718 Glutamate--cysteine ligase GshA RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 PRINTS PR00184 Neisseria sp. porin signature 330 354 3.4E-9 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 PRINTS PR00184 Neisseria sp. porin signature 163 180 3.4E-9 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 PRINTS PR00184 Neisseria sp. porin signature 61 86 3.4E-9 T 23-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 SUPERFAMILY SSF56935 22 221 6.11E-72 T 23-04-2016 RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 SUPERFAMILY SSF56935 248 403 6.11E-72 T 23-04-2016 RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 333 350 1.4E-6 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 192 204 1.4E-6 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 164 175 1.4E-6 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 104 114 1.4E-6 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 59 70 1.4E-6 T 23-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 Gene3D G3DSA:2.40.160.10 22 403 1.5E-86 T 23-04-2016 IPR023614 Porin domain RBRH_RS06365 f6dde457c5859e0fd8f0c1a8cb7d0557 403 Pfam PF13609 Gram-negative porin 10 358 2.3E-39 T 23-04-2016 RBRH_RS08690 ef25ba5c42a48306cfee8b1ba86ebf4f 255 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 90 253 5.3E-8 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS08690 ef25ba5c42a48306cfee8b1ba86ebf4f 255 PANTHER PTHR30143 4 247 1.5E-52 T 23-04-2016 RBRH_RS08690 ef25ba5c42a48306cfee8b1ba86ebf4f 255 Gene3D G3DSA:3.90.850.10 4 253 3.7E-68 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS08690 ef25ba5c42a48306cfee8b1ba86ebf4f 255 SUPERFAMILY SSF56529 3 253 7.51E-63 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS04315 05374625d215f37a57fb352bbd0afa2c 126 Gene3D G3DSA:1.20.5.1030 64 121 2.1E-23 T 23-04-2016 RBRH_RS04315 05374625d215f37a57fb352bbd0afa2c 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 119 1.3E-17 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 RBRH_RS04315 05374625d215f37a57fb352bbd0afa2c 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 123 3.1E-17 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RBRH_RS04315 05374625d215f37a57fb352bbd0afa2c 126 PANTHER PTHR33910 1 126 1.9E-17 T 23-04-2016 RBRH_RS04315 05374625d215f37a57fb352bbd0afa2c 126 PANTHER PTHR33910:SF1 1 126 1.9E-17 T 23-04-2016 RBRH_RS04315 05374625d215f37a57fb352bbd0afa2c 126 PRINTS PR01650 Bacterial translocase SecE signature 43 64 1.9E-15 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RBRH_RS04315 05374625d215f37a57fb352bbd0afa2c 126 PRINTS PR01650 Bacterial translocase SecE signature 64 84 1.9E-15 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RBRH_RS04315 05374625d215f37a57fb352bbd0afa2c 126 PRINTS PR01650 Bacterial translocase SecE signature 88 108 1.9E-15 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RBRH_RS04315 05374625d215f37a57fb352bbd0afa2c 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 120 11.547 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE RBRH_RS05040 d2d8ea43d0f7b467da0183cffa317d5e 266 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 46 264 37.776 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RBRH_RS05040 d2d8ea43d0f7b467da0183cffa317d5e 266 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 97 106 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 RBRH_RS05040 d2d8ea43d0f7b467da0183cffa317d5e 266 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 48 257 4.7E-74 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RBRH_RS05040 d2d8ea43d0f7b467da0183cffa317d5e 266 SUPERFAMILY SSF52141 45 265 2.33E-82 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS05040 d2d8ea43d0f7b467da0183cffa317d5e 266 Pfam PF03167 Uracil DNA glycosylase superfamily 92 251 5.4E-23 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS05040 d2d8ea43d0f7b467da0183cffa317d5e 266 Gene3D G3DSA:3.40.470.10 37 265 8.1E-92 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS05040 d2d8ea43d0f7b467da0183cffa317d5e 266 PANTHER PTHR11264 35 266 6.0E-114 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RBRH_RS05040 d2d8ea43d0f7b467da0183cffa317d5e 266 SMART SM00986 89 253 1.1E-35 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like RBRH_RS05040 d2d8ea43d0f7b467da0183cffa317d5e 266 SMART SM00987 89 253 1.1E-35 T 23-04-2016 RBRH_RS10835 909d3e47bce6e3958b0910aa7492c2e4 94 Gene3D G3DSA:3.40.50.150 3 92 7.3E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS10835 909d3e47bce6e3958b0910aa7492c2e4 94 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 80 5.5E-13 T 23-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 RBRH_RS10835 909d3e47bce6e3958b0910aa7492c2e4 94 SUPERFAMILY SSF53335 4 92 7.48E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS04165 0c20d1b116cf589a043eb8e34a75d33b 269 Gene3D G3DSA:3.10.270.10 9 263 1.5E-106 T 23-04-2016 RBRH_RS04165 0c20d1b116cf589a043eb8e34a75d33b 269 PANTHER PTHR36445 5 265 4.1E-73 T 23-04-2016 RBRH_RS04165 0c20d1b116cf589a043eb8e34a75d33b 269 Pfam PF02649 Type I GTP cyclohydrolase folE2 10 259 2.1E-92 T 23-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RBRH_RS04165 0c20d1b116cf589a043eb8e34a75d33b 269 PANTHER PTHR36445:SF1 5 265 4.1E-73 T 23-04-2016 RBRH_RS04165 0c20d1b116cf589a043eb8e34a75d33b 269 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 10 264 37.724 T 23-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RBRH_RS09145 e3f268cc34c439b405ed79e3f0513863 163 Gene3D G3DSA:3.30.70.1150 83 162 1.3E-27 T 23-04-2016 RBRH_RS09145 e3f268cc34c439b405ed79e3f0513863 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 7.3E-25 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RBRH_RS09145 e3f268cc34c439b405ed79e3f0513863 163 SUPERFAMILY SSF55021 1 76 7.2E-22 T 23-04-2016 RBRH_RS09145 e3f268cc34c439b405ed79e3f0513863 163 Pfam PF13710 ACT domain 12 73 7.9E-15 T 23-04-2016 RBRH_RS09145 e3f268cc34c439b405ed79e3f0513863 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 5.0E-35 T 23-04-2016 RBRH_RS09145 e3f268cc34c439b405ed79e3f0513863 163 PANTHER PTHR30239 1 161 3.1E-80 T 23-04-2016 RBRH_RS09145 e3f268cc34c439b405ed79e3f0513863 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 2.4E-62 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RBRH_RS09145 e3f268cc34c439b405ed79e3f0513863 163 Gene3D G3DSA:3.30.70.260 1 78 7.2E-36 T 23-04-2016 RBRH_RS09145 e3f268cc34c439b405ed79e3f0513863 163 SUPERFAMILY SSF55021 79 162 2.29E-24 T 23-04-2016 RBRH_RS08315 86d0c48fb8eb58b8b4bcf01874df2cf7 378 PANTHER PTHR11941:SF53 23 198 2.4E-93 T 23-04-2016 RBRH_RS08315 86d0c48fb8eb58b8b4bcf01874df2cf7 378 PANTHER PTHR11941:SF53 267 345 2.4E-93 T 23-04-2016 RBRH_RS08315 86d0c48fb8eb58b8b4bcf01874df2cf7 378 SUPERFAMILY SSF52096 276 344 7.04E-66 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS08315 86d0c48fb8eb58b8b4bcf01874df2cf7 378 SUPERFAMILY SSF52096 13 206 7.04E-66 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS08315 86d0c48fb8eb58b8b4bcf01874df2cf7 378 PANTHER PTHR11941 23 198 2.4E-93 T 23-04-2016 RBRH_RS08315 86d0c48fb8eb58b8b4bcf01874df2cf7 378 PANTHER PTHR11941 267 345 2.4E-93 T 23-04-2016 RBRH_RS08315 86d0c48fb8eb58b8b4bcf01874df2cf7 378 Pfam PF16113 Enoyl-CoA hydratase/isomerase 26 361 6.9E-112 T 23-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 RBRH_RS08315 86d0c48fb8eb58b8b4bcf01874df2cf7 378 Gene3D G3DSA:3.90.226.10 277 345 6.3E-60 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS08315 86d0c48fb8eb58b8b4bcf01874df2cf7 378 Gene3D G3DSA:3.90.226.10 14 209 6.3E-60 T 23-04-2016 IPR029045 ClpP/crotonase-like domain RBRH_RS10910 6d1567283cbc7c35d512afb6b77722c2 427 Pfam PF01168 Alanine racemase, N-terminal domain 53 257 5.6E-13 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RBRH_RS10910 6d1567283cbc7c35d512afb6b77722c2 427 PANTHER PTHR28004:SF1 16 427 3.1E-79 T 23-04-2016 RBRH_RS10910 6d1567283cbc7c35d512afb6b77722c2 427 Pfam PF14031 Putative serine dehydratase domain 311 413 2.2E-15 T 23-04-2016 IPR026956 D-serine dehydratase-like domain RBRH_RS10910 6d1567283cbc7c35d512afb6b77722c2 427 Gene3D G3DSA:3.20.20.10 53 199 1.6E-8 T 23-04-2016 IPR029066 PLP-binding barrel RBRH_RS10910 6d1567283cbc7c35d512afb6b77722c2 427 SUPERFAMILY SSF51419 52 286 9.35E-28 T 23-04-2016 IPR029066 PLP-binding barrel RBRH_RS10910 6d1567283cbc7c35d512afb6b77722c2 427 PANTHER PTHR28004 16 427 3.1E-79 T 23-04-2016 RBRH_RS10910 6d1567283cbc7c35d512afb6b77722c2 427 SMART SM01119 311 414 7.7E-35 T 23-04-2016 IPR026956 D-serine dehydratase-like domain RBRH_RS07280 b645130c6a5ef5a7902b32034781e4cf 283 SUPERFAMILY SSF51225 130 157 5.75E-5 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS07280 b645130c6a5ef5a7902b32034781e4cf 283 Gene3D G3DSA:2.10.25.20 105 150 1.8E-6 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS07280 b645130c6a5ef5a7902b32034781e4cf 283 Gene3D G3DSA:2.10.25.20 46 104 1.8E-6 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS07280 b645130c6a5ef5a7902b32034781e4cf 283 Gene3D G3DSA:2.10.25.20 151 208 1.5E-6 T 23-04-2016 IPR009013 Attachment protein shaft domain GO:0007155|GO:0019058|GO:0019062 RBRH_RS10780 4e108e83428e26986cb162ba9e01830e 264 PIRSF PIRSF015626 3 262 2.6E-75 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 RBRH_RS10780 4e108e83428e26986cb162ba9e01830e 264 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 18 255 1.2E-61 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 RBRH_RS10780 4e108e83428e26986cb162ba9e01830e 264 Gene3D G3DSA:3.10.20.10 24 110 3.2E-28 T 23-04-2016 RBRH_RS10780 4e108e83428e26986cb162ba9e01830e 264 Pfam PF02634 FdhD/NarQ family 23 260 1.8E-67 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 RBRH_RS10780 4e108e83428e26986cb162ba9e01830e 264 PANTHER PTHR30592:SF1 3 260 1.1E-87 T 23-04-2016 RBRH_RS10780 4e108e83428e26986cb162ba9e01830e 264 PANTHER PTHR30592 3 260 1.1E-87 T 23-04-2016 RBRH_RS10780 4e108e83428e26986cb162ba9e01830e 264 SUPERFAMILY SSF53927 3 260 1.11E-72 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RBRH_RS10780 4e108e83428e26986cb162ba9e01830e 264 Hamap MF_00187 Protein FdhD [fdhD]. 1 264 30.78 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 RBRH_RS10780 4e108e83428e26986cb162ba9e01830e 264 Gene3D G3DSA:3.40.140.10 132 260 6.1E-45 T 23-04-2016 RBRH_RS05165 2a7d6000ad8113e4db0edfd76e290023 112 Pfam PF16931 Putative phage holin 7 90 2.3E-9 T 23-04-2016 IPR032637 Putative phage holin-like RBRH_RS02435 e93aa530bbcc666f53f85155d294bf88 132 PANTHER PTHR33542 7 117 2.1E-18 T 23-04-2016 RBRH_RS02435 e93aa530bbcc666f53f85155d294bf88 132 Gene3D G3DSA:3.40.50.1400 5 130 9.7E-32 T 23-04-2016 RBRH_RS02435 e93aa530bbcc666f53f85155d294bf88 132 Pfam PF01903 CbiX 13 120 4.5E-22 T 23-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 RBRH_RS02435 e93aa530bbcc666f53f85155d294bf88 132 SUPERFAMILY SSF53800 5 127 1.83E-28 T 23-04-2016 RBRH_RS00710 fe68179ba978e97a703ff00715286dc1 107 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 14 93 3.8E-14 T 23-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative RBRH_RS03460 fa84d45d958a6dca059d9790de0dc2bc 259 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 19 252 5.8E-46 T 23-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RBRH_RS03460 fa84d45d958a6dca059d9790de0dc2bc 259 Gene3D G3DSA:3.40.50.1000 173 254 1.8E-39 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS03460 fa84d45d958a6dca059d9790de0dc2bc 259 Gene3D G3DSA:3.40.50.1000 20 97 1.8E-39 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS03460 fa84d45d958a6dca059d9790de0dc2bc 259 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 223 3.9E-20 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RBRH_RS03460 fa84d45d958a6dca059d9790de0dc2bc 259 Pfam PF02358 Trehalose-phosphatase 22 230 1.3E-40 T 23-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RBRH_RS03460 fa84d45d958a6dca059d9790de0dc2bc 259 SUPERFAMILY SSF56784 20 252 1.21E-38 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS03460 fa84d45d958a6dca059d9790de0dc2bc 259 PANTHER PTHR10788:SF42 20 256 9.0E-57 T 23-04-2016 RBRH_RS03460 fa84d45d958a6dca059d9790de0dc2bc 259 PANTHER PTHR10788 20 256 9.0E-57 T 23-04-2016 RBRH_RS00260 4722f279335047510ed98e178e3b8308 102 Gene3D G3DSA:3.30.70.900 6 93 5.8E-25 T 23-04-2016 RBRH_RS00260 4722f279335047510ed98e178e3b8308 102 PANTHER PTHR33336 8 92 1.4E-17 T 23-04-2016 RBRH_RS00260 4722f279335047510ed98e178e3b8308 102 Pfam PF03992 Antibiotic biosynthesis monooxygenase 8 77 6.4E-16 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RBRH_RS00260 4722f279335047510ed98e178e3b8308 102 SUPERFAMILY SSF54909 5 93 2.64E-24 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RBRH_RS08920 8edaabb7642b39ef85cbcc280356f67f 394 PANTHER PTHR11751 20 394 1.6E-133 T 23-04-2016 RBRH_RS08920 8edaabb7642b39ef85cbcc280356f67f 394 PANTHER PTHR11751:SF301 20 394 1.6E-133 T 23-04-2016 RBRH_RS08920 8edaabb7642b39ef85cbcc280356f67f 394 Gene3D G3DSA:3.40.640.10 54 282 6.3E-78 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS08920 8edaabb7642b39ef85cbcc280356f67f 394 SUPERFAMILY SSF53383 17 393 9.21E-103 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS08920 8edaabb7642b39ef85cbcc280356f67f 394 Pfam PF00155 Aminotransferase class I and II 42 391 5.7E-60 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RBRH_RS08920 8edaabb7642b39ef85cbcc280356f67f 394 Gene3D G3DSA:3.90.1150.10 283 393 1.3E-12 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS10115 72b78ccf30c42d606116f18a135c4640 479 SUPERFAMILY SSF103473 6 197 2.35E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS10115 72b78ccf30c42d606116f18a135c4640 479 SUPERFAMILY SSF103473 249 466 2.35E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS10115 72b78ccf30c42d606116f18a135c4640 479 Pfam PF07690 Major Facilitator Superfamily 17 412 9.6E-48 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS10115 72b78ccf30c42d606116f18a135c4640 479 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 425 3.8E-71 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RBRH_RS10115 72b78ccf30c42d606116f18a135c4640 479 Gene3D G3DSA:1.20.1250.20 8 198 3.4E-31 T 23-04-2016 RBRH_RS10115 72b78ccf30c42d606116f18a135c4640 479 Gene3D G3DSA:1.20.1250.20 266 466 3.8E-17 T 23-04-2016 RBRH_RS10115 72b78ccf30c42d606116f18a135c4640 479 PANTHER PTHR23501 3 479 1.9E-135 T 23-04-2016 RBRH_RS10115 72b78ccf30c42d606116f18a135c4640 479 PANTHER PTHR23501:SF76 3 479 1.9E-135 T 23-04-2016 RBRH_RS07240 9d338b31b0bdaaa0db9a9c5bad46bf58 72 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 39 2.2E-5 T 23-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RBRH_RS11495 19492b01c1ad49735f0c67215358dfa9 131 Pfam PF04138 GtrA-like protein 7 125 9.9E-22 T 23-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RBRH_RS06095 8a6a1ad331b581807d9c707465448f18 157 Gene3D G3DSA:1.10.490.10 17 124 4.6E-21 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RBRH_RS06095 8a6a1ad331b581807d9c707465448f18 157 SUPERFAMILY SSF46458 17 125 1.03E-26 T 23-04-2016 IPR009050 Globin-like RBRH_RS05405 2cb06d77c7db917d73473dfa22244da7 150 PANTHER PTHR33164 11 147 3.7E-19 T 23-04-2016 RBRH_RS05405 2cb06d77c7db917d73473dfa22244da7 150 SMART SM00347 33 133 9.9E-18 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS05405 2cb06d77c7db917d73473dfa22244da7 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 2.6E-10 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS05405 2cb06d77c7db917d73473dfa22244da7 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 2.6E-10 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS05405 2cb06d77c7db917d73473dfa22244da7 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 2.6E-10 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS05405 2cb06d77c7db917d73473dfa22244da7 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 2.6E-10 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS05405 2cb06d77c7db917d73473dfa22244da7 150 Gene3D G3DSA:1.10.10.10 2 144 1.3E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS05405 2cb06d77c7db917d73473dfa22244da7 150 SUPERFAMILY SSF46785 5 145 3.17E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS05405 2cb06d77c7db917d73473dfa22244da7 150 Pfam PF12802 MarR family 38 97 1.2E-12 T 23-04-2016 RBRH_RS09875 d688fb7941cab480c0aad05401aefd11 347 Pfam PF00953 Glycosyl transferase family 4 78 219 4.5E-25 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS09875 d688fb7941cab480c0aad05401aefd11 347 PANTHER PTHR22926:SF3 11 344 1.1E-62 T 23-04-2016 RBRH_RS09875 d688fb7941cab480c0aad05401aefd11 347 PANTHER PTHR22926 11 344 1.1E-62 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RBRH_RS09650 312effee88202afd98d4853b475facdc 240 SUPERFAMILY SSF46894 131 231 9.92E-27 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RBRH_RS09650 312effee88202afd98d4853b475facdc 240 Gene3D G3DSA:3.40.50.2300 3 124 2.2E-42 T 23-04-2016 RBRH_RS09650 312effee88202afd98d4853b475facdc 240 SUPERFAMILY SSF52172 3 129 8.54E-43 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS09650 312effee88202afd98d4853b475facdc 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 3.3E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS09650 312effee88202afd98d4853b475facdc 240 SMART SM00862 153 229 1.0E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RBRH_RS09650 312effee88202afd98d4853b475facdc 240 Gene3D G3DSA:1.10.10.10 130 232 1.5E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS09650 312effee88202afd98d4853b475facdc 240 PANTHER PTHR26402:SF292 3 232 6.2E-92 T 23-04-2016 RBRH_RS09650 312effee88202afd98d4853b475facdc 240 SMART SM00448 3 114 5.0E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS09650 312effee88202afd98d4853b475facdc 240 Pfam PF00072 Response regulator receiver domain 5 115 7.0E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RBRH_RS09650 312effee88202afd98d4853b475facdc 240 PANTHER PTHR26402 3 232 6.2E-92 T 23-04-2016 RBRH_RS08375 21bcc6ef943b75e201eeb5321f33dee6 424 Gene3D G3DSA:3.20.20.140 60 348 3.0E-108 T 23-04-2016 RBRH_RS08375 21bcc6ef943b75e201eeb5321f33dee6 424 SUPERFAMILY SSF51338 361 403 7.11E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS08375 21bcc6ef943b75e201eeb5321f33dee6 424 SUPERFAMILY SSF51338 1 51 7.11E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS08375 21bcc6ef943b75e201eeb5321f33dee6 424 PANTHER PTHR32027:SF0 1 405 4.3E-128 T 23-04-2016 RBRH_RS08375 21bcc6ef943b75e201eeb5321f33dee6 424 Pfam PF07969 Amidohydrolase family 40 399 9.8E-45 T 23-04-2016 IPR013108 Amidohydrolase 3 RBRH_RS08375 21bcc6ef943b75e201eeb5321f33dee6 424 Gene3D G3DSA:2.30.40.10 1 59 1.3E-15 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS08375 21bcc6ef943b75e201eeb5321f33dee6 424 Gene3D G3DSA:2.30.40.10 349 402 6.0E-5 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RBRH_RS08375 21bcc6ef943b75e201eeb5321f33dee6 424 SUPERFAMILY SSF51556 51 370 9.21E-106 T 23-04-2016 IPR032466 Metal-dependent hydrolase RBRH_RS08375 21bcc6ef943b75e201eeb5321f33dee6 424 PANTHER PTHR32027 1 405 4.3E-128 T 23-04-2016 RBRH_RS10555 d1d023f51c4b7c44bfbc9417578fce5a 147 PANTHER PTHR35862:SF2 1 134 1.0E-14 T 23-04-2016 RBRH_RS10555 d1d023f51c4b7c44bfbc9417578fce5a 147 PANTHER PTHR35862 1 134 1.0E-14 T 23-04-2016 RBRH_RS10555 d1d023f51c4b7c44bfbc9417578fce5a 147 Pfam PF04965 Gene 25-like lysozyme 40 127 1.5E-17 T 23-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD RBRH_RS10555 d1d023f51c4b7c44bfbc9417578fce5a 147 SUPERFAMILY SSF160719 34 139 1.57E-19 T 23-04-2016 RBRH_RS10555 d1d023f51c4b7c44bfbc9417578fce5a 147 Gene3D G3DSA:3.10.450.40 6 142 4.7E-34 T 23-04-2016 RBRH_RS11760 7f0293c4a7e70bd413aa207d55ecb2e4 342 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 329 9.4E-100 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RBRH_RS11760 7f0293c4a7e70bd413aa207d55ecb2e4 342 PANTHER PTHR18866 198 332 4.1E-33 T 23-04-2016 RBRH_RS11760 7f0293c4a7e70bd413aa207d55ecb2e4 342 Gene3D G3DSA:2.40.100.10 198 315 1.9E-6 T 23-04-2016 IPR029000 Cyclophilin-like domain RBRH_RS11760 7f0293c4a7e70bd413aa207d55ecb2e4 342 SUPERFAMILY SSF50891 198 313 1.14E-12 T 23-04-2016 IPR029000 Cyclophilin-like domain RBRH_RS11760 7f0293c4a7e70bd413aa207d55ecb2e4 342 PANTHER PTHR18866:SF74 198 332 4.1E-33 T 23-04-2016 RBRH_RS11760 7f0293c4a7e70bd413aa207d55ecb2e4 342 Pfam PF02626 Allophanate hydrolase subunit 2 24 305 1.5E-91 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RBRH_RS11760 7f0293c4a7e70bd413aa207d55ecb2e4 342 SMART SM00797 23 323 5.7E-134 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RBRH_RS11995 e12371575ffdfef1f4ccbfc1ea6c8fc0 497 Gene3D G3DSA:3.90.1300.10 2 494 1.1E-178 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS11995 e12371575ffdfef1f4ccbfc1ea6c8fc0 497 PANTHER PTHR11895 1 494 3.8E-211 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS11995 e12371575ffdfef1f4ccbfc1ea6c8fc0 497 SUPERFAMILY SSF75304 2 494 3.14E-160 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS11995 e12371575ffdfef1f4ccbfc1ea6c8fc0 497 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 10 488 4.1E-170 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS11995 e12371575ffdfef1f4ccbfc1ea6c8fc0 497 PANTHER PTHR11895:SF7 1 494 3.8E-211 T 23-04-2016 RBRH_RS11995 e12371575ffdfef1f4ccbfc1ea6c8fc0 497 Pfam PF01425 Amidase 22 477 2.1E-146 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS11995 e12371575ffdfef1f4ccbfc1ea6c8fc0 497 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 488 91.77 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS11995 e12371575ffdfef1f4ccbfc1ea6c8fc0 497 ProSitePatterns PS00571 Amidases signature. 148 179 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS07920 925598728233e7608a2c398575f3c9d9 698 Pfam PF05650 Domain of unknown function (DUF802) 321 373 8.3E-14 T 23-04-2016 IPR008520 Domain of unknown function DUF802 RBRH_RS07920 925598728233e7608a2c398575f3c9d9 698 Pfam PF05650 Domain of unknown function (DUF802) 376 426 4.1E-5 T 23-04-2016 IPR008520 Domain of unknown function DUF802 RBRH_RS07920 925598728233e7608a2c398575f3c9d9 698 SUPERFAMILY SSF58113 283 443 2.88E-5 T 23-04-2016 RBRH_RS04715 518baee2b9cc0f25085f693e261f57c4 354 Pfam PF04333 MlaA lipoprotein 29 221 4.4E-73 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RBRH_RS04715 518baee2b9cc0f25085f693e261f57c4 354 PANTHER PTHR30035 4 237 3.1E-65 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RBRH_RS04715 518baee2b9cc0f25085f693e261f57c4 354 PRINTS PR01805 VacJ lipoprotein signature 30 43 8.3E-27 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RBRH_RS04715 518baee2b9cc0f25085f693e261f57c4 354 PRINTS PR01805 VacJ lipoprotein signature 134 151 8.3E-27 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RBRH_RS04715 518baee2b9cc0f25085f693e261f57c4 354 PRINTS PR01805 VacJ lipoprotein signature 98 115 8.3E-27 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RBRH_RS04715 518baee2b9cc0f25085f693e261f57c4 354 PRINTS PR01805 VacJ lipoprotein signature 47 63 8.3E-27 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RBRH_RS04715 518baee2b9cc0f25085f693e261f57c4 354 PANTHER PTHR30035:SF3 4 237 3.1E-65 T 23-04-2016 RBRH_RS08190 e785a640838e8d11c8fc669e676c2a33 152 PANTHER PTHR37485:SF1 2 107 6.0E-32 T 23-04-2016 RBRH_RS08190 e785a640838e8d11c8fc669e676c2a33 152 PANTHER PTHR37485 2 107 6.0E-32 T 23-04-2016 RBRH_RS08190 e785a640838e8d11c8fc669e676c2a33 152 Pfam PF04977 Septum formation initiator 11 89 3.6E-22 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 RBRH_RS08190 e785a640838e8d11c8fc669e676c2a33 152 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 31.343 T 23-04-2016 IPR023081 Cell division protein FtsB RBRH_RS02205 4ba3fed4e219fcdd6bb85ff671adb833 189 Pfam PF00849 RNA pseudouridylate synthase 3 148 3.6E-16 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS02205 4ba3fed4e219fcdd6bb85ff671adb833 189 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 179 3.0E-46 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RBRH_RS02205 4ba3fed4e219fcdd6bb85ff671adb833 189 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 38 52 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RBRH_RS02205 4ba3fed4e219fcdd6bb85ff671adb833 189 PANTHER PTHR21600:SF23 2 104 1.7E-63 T 23-04-2016 RBRH_RS02205 4ba3fed4e219fcdd6bb85ff671adb833 189 PANTHER PTHR21600:SF23 122 179 1.7E-63 T 23-04-2016 RBRH_RS02205 4ba3fed4e219fcdd6bb85ff671adb833 189 SUPERFAMILY SSF55120 3 185 6.88E-40 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS02205 4ba3fed4e219fcdd6bb85ff671adb833 189 PANTHER PTHR21600 2 104 1.7E-63 T 23-04-2016 RBRH_RS02205 4ba3fed4e219fcdd6bb85ff671adb833 189 PANTHER PTHR21600 122 179 1.7E-63 T 23-04-2016 RBRH_RS02850 f033b07acd55d07f51485dfccf45c65a 463 Gene3D G3DSA:3.90.1300.10 15 460 1.2E-114 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS02850 f033b07acd55d07f51485dfccf45c65a 463 PANTHER PTHR11895 18 458 1.9E-111 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS02850 f033b07acd55d07f51485dfccf45c65a 463 ProSitePatterns PS00571 Amidases signature. 167 198 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS02850 f033b07acd55d07f51485dfccf45c65a 463 SUPERFAMILY SSF75304 15 459 3.66E-113 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS02850 f033b07acd55d07f51485dfccf45c65a 463 Pfam PF01425 Amidase 31 449 6.4E-87 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RBRH_RS02850 f033b07acd55d07f51485dfccf45c65a 463 PANTHER PTHR11895:SF73 18 458 1.9E-111 T 23-04-2016 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 Pfam PF00067 Cytochrome P450 57 446 1.4E-47 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PANTHER PTHR24286 61 448 6.5E-74 T 23-04-2016 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00463 E-class P450 group I signature 345 363 2.5E-18 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00463 E-class P450 group I signature 82 101 2.5E-18 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00463 E-class P450 group I signature 385 409 2.5E-18 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00463 E-class P450 group I signature 303 329 2.5E-18 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00463 E-class P450 group I signature 419 429 2.5E-18 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00463 E-class P450 group I signature 429 452 2.5E-18 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00463 E-class P450 group I signature 283 300 2.5E-18 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 SUPERFAMILY SSF48264 50 483 1.44E-76 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00385 P450 superfamily signature 294 311 6.2E-11 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00385 P450 superfamily signature 429 440 6.2E-11 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00385 P450 superfamily signature 420 429 6.2E-11 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 PRINTS PR00385 P450 superfamily signature 346 357 6.2E-11 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 Gene3D G3DSA:1.10.630.10 57 482 2.5E-77 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 RBRH_RS07325 34c6005556f96fcbc2766a180e553db1 485 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 422 431 - T 23-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 RBRH_RS01490 0b3e3882042a2e755600849dbf6edff6 158 Pfam PF05433 Glycine zipper 2TM domain 67 106 2.5E-6 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RBRH_RS01490 0b3e3882042a2e755600849dbf6edff6 158 PANTHER PTHR35603 4 156 3.0E-21 T 23-04-2016 RBRH_RS01490 0b3e3882042a2e755600849dbf6edff6 158 PANTHER PTHR35603:SF1 4 156 3.0E-21 T 23-04-2016 RBRH_RS09765 67300ae02e177dbfcd0a942d3625c515 187 Pfam PF02325 YGGT family 108 174 6.7E-16 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 RBRH_RS09765 67300ae02e177dbfcd0a942d3625c515 187 Pfam PF02325 YGGT family 11 80 4.8E-13 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 RBRH_RS09765 67300ae02e177dbfcd0a942d3625c515 187 PANTHER PTHR33219:SF5 8 178 1.5E-33 T 23-04-2016 RBRH_RS09765 67300ae02e177dbfcd0a942d3625c515 187 PANTHER PTHR33219 8 178 1.5E-33 T 23-04-2016 RBRH_RS11240 7ff933b7a3c0842a4bfca963de50dcaa 156 PANTHER PTHR12029:SF31 1 154 4.4E-73 T 23-04-2016 RBRH_RS11240 7ff933b7a3c0842a4bfca963de50dcaa 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 154 6.2E-59 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RBRH_RS11240 7ff933b7a3c0842a4bfca963de50dcaa 156 PANTHER PTHR12029 1 154 4.4E-73 T 23-04-2016 RBRH_RS11240 7ff933b7a3c0842a4bfca963de50dcaa 156 Gene3D G3DSA:3.40.1280.10 1 155 3.5E-64 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RBRH_RS11240 7ff933b7a3c0842a4bfca963de50dcaa 156 Pfam PF00588 SpoU rRNA Methylase family 2 143 8.5E-31 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RBRH_RS11240 7ff933b7a3c0842a4bfca963de50dcaa 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 32.368 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RBRH_RS11240 7ff933b7a3c0842a4bfca963de50dcaa 156 PIRSF PIRSF029256 1 156 2.3E-64 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RBRH_RS11240 7ff933b7a3c0842a4bfca963de50dcaa 156 SUPERFAMILY SSF75217 1 154 1.37E-42 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases RBRH_RS09690 14cc8e99f58f45c335bdc8d40beeb160 405 SUPERFAMILY SSF103473 5 397 1.7E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS09690 14cc8e99f58f45c335bdc8d40beeb160 405 PANTHER PTHR23502:SF39 14 404 4.7E-121 T 23-04-2016 RBRH_RS09690 14cc8e99f58f45c335bdc8d40beeb160 405 Pfam PF07690 Major Facilitator Superfamily 22 360 1.7E-42 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS09690 14cc8e99f58f45c335bdc8d40beeb160 405 Gene3D G3DSA:1.20.1250.20 213 399 5.0E-9 T 23-04-2016 RBRH_RS09690 14cc8e99f58f45c335bdc8d40beeb160 405 Gene3D G3DSA:1.20.1250.20 7 198 2.6E-30 T 23-04-2016 RBRH_RS09690 14cc8e99f58f45c335bdc8d40beeb160 405 PANTHER PTHR23502 14 404 4.7E-121 T 23-04-2016 RBRH_RS09690 14cc8e99f58f45c335bdc8d40beeb160 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 392 1.3E-90 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 RBRH_RS02545 79907cf3b0fa56a1d843ee8988488fcd 606 PANTHER PTHR12815 78 593 3.4E-49 T 23-04-2016 RBRH_RS02545 79907cf3b0fa56a1d843ee8988488fcd 606 Pfam PF01103 Surface antigen 326 594 8.1E-25 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RBRH_RS02545 79907cf3b0fa56a1d843ee8988488fcd 606 PANTHER PTHR12815:SF12 78 593 3.4E-49 T 23-04-2016 RBRH_RS02545 79907cf3b0fa56a1d843ee8988488fcd 606 Pfam PF07244 Surface antigen variable number repeat 226 296 1.1E-4 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 RBRH_RS12025 d5eaa2803307383a0b18a3c1758d5a70 382 PANTHER PTHR30474:SF1 1 381 4.6E-132 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RBRH_RS12025 d5eaa2803307383a0b18a3c1758d5a70 382 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 335 359 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 RBRH_RS12025 d5eaa2803307383a0b18a3c1758d5a70 382 Pfam PF01098 Cell cycle protein 25 378 3.0E-100 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RBRH_RS12025 d5eaa2803307383a0b18a3c1758d5a70 382 PANTHER PTHR30474 1 381 4.6E-132 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RBRH_RS12025 d5eaa2803307383a0b18a3c1758d5a70 382 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 377 1.8E-124 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RBRH_RS05875 e8e04bd42945dbcf3bd06fc2acf723a6 71 Pfam PF04325 Protein of unknown function (DUF465) 17 61 6.4E-13 T 23-04-2016 IPR007420 Protein of unknown function DUF465 RBRH_RS02635 d97daf5c1d2e50b4ff0aa3eb23afe5f9 408 PANTHER PTHR31384 77 338 1.8E-52 T 23-04-2016 RBRH_RS02635 d97daf5c1d2e50b4ff0aa3eb23afe5f9 408 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 20 402 4.9E-152 T 23-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition RBRH_RS02635 d97daf5c1d2e50b4ff0aa3eb23afe5f9 408 SUPERFAMILY SSF55729 203 380 3.31E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS02635 d97daf5c1d2e50b4ff0aa3eb23afe5f9 408 Gene3D G3DSA:3.40.630.30 193 352 9.3E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS06950 7f96fb1129401c385bdca8231ebd018f 367 SUPERFAMILY SSF53756 11 338 5.97E-61 T 23-04-2016 RBRH_RS06950 7f96fb1129401c385bdca8231ebd018f 367 PANTHER PTHR12526 1 340 2.8E-44 T 23-04-2016 RBRH_RS06950 7f96fb1129401c385bdca8231ebd018f 367 Pfam PF00534 Glycosyl transferases group 1 170 309 2.1E-24 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RBRH_RS06950 7f96fb1129401c385bdca8231ebd018f 367 Gene3D G3DSA:3.40.50.2000 161 308 2.8E-19 T 23-04-2016 RBRH_RS06950 7f96fb1129401c385bdca8231ebd018f 367 Pfam PF13439 Glycosyltransferase Family 4 18 119 1.8E-13 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RBRH_RS12090 e767a66528179333c76580aea0a3087c 197 Pfam PF14334 Domain of unknown function (DUF4390) 32 188 2.4E-59 T 23-04-2016 IPR025500 Protein of unknown function DUF4390 RBRH_RS02020 746658c028847ec98534dbca99070c88 91 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.328 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02020 746658c028847ec98534dbca99070c88 91 Pfam PF01649 Ribosomal protein S20 2 84 1.3E-23 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02020 746658c028847ec98534dbca99070c88 91 SUPERFAMILY SSF46992 3 86 9.94E-27 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02020 746658c028847ec98534dbca99070c88 91 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 5.4E-25 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02020 746658c028847ec98534dbca99070c88 91 Gene3D G3DSA:1.20.58.110 1 86 1.6E-26 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02020 746658c028847ec98534dbca99070c88 91 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 79 6.0E-21 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RBRH_RS02020 746658c028847ec98534dbca99070c88 91 PANTHER PTHR33398 1 90 1.1E-27 T 23-04-2016 RBRH_RS06030 a574456c441c4c4371af180d04088432 346 SUPERFAMILY SSF51735 2 337 2.88E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06030 a574456c441c4c4371af180d04088432 346 Gene3D G3DSA:3.90.25.10 255 325 5.3E-38 T 23-04-2016 RBRH_RS06030 a574456c441c4c4371af180d04088432 346 Gene3D G3DSA:3.40.50.720 1 239 4.2E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS06030 a574456c441c4c4371af180d04088432 346 PANTHER PTHR10366 3 342 3.5E-113 T 23-04-2016 RBRH_RS06030 a574456c441c4c4371af180d04088432 346 PANTHER PTHR10366:SF253 3 342 3.5E-113 T 23-04-2016 RBRH_RS06030 a574456c441c4c4371af180d04088432 346 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 251 7.3E-46 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RBRH_RS05425 86161d40a41c9c6b0690c071852ea61d 248 PANTHER PTHR24032 4 209 1.2E-18 T 23-04-2016 RBRH_RS05425 86161d40a41c9c6b0690c071852ea61d 248 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 77 82 - T 23-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 RBRH_RS05425 86161d40a41c9c6b0690c071852ea61d 248 SUPERFAMILY SSF56300 14 221 7.6E-37 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RBRH_RS05425 86161d40a41c9c6b0690c071852ea61d 248 Gene3D G3DSA:3.60.21.10 15 230 4.7E-36 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like RBRH_RS05425 86161d40a41c9c6b0690c071852ea61d 248 Pfam PF00149 Calcineurin-like phosphoesterase 22 144 7.7E-10 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RBRH_RS06245 f9c63364a99743cbccfb6b6a90b2829f 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 2.8E-18 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS06245 f9c63364a99743cbccfb6b6a90b2829f 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 2.8E-18 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS06245 f9c63364a99743cbccfb6b6a90b2829f 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 2.8E-18 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS06245 f9c63364a99743cbccfb6b6a90b2829f 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 129 149 2.8E-18 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS06245 f9c63364a99743cbccfb6b6a90b2829f 158 Pfam PF12802 MarR family 44 102 3.7E-15 T 23-04-2016 RBRH_RS06245 f9c63364a99743cbccfb6b6a90b2829f 158 ProSitePatterns PS01117 MarR-type HTH domain signature. 78 112 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RBRH_RS06245 f9c63364a99743cbccfb6b6a90b2829f 158 SUPERFAMILY SSF46785 20 152 2.03E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06245 f9c63364a99743cbccfb6b6a90b2829f 158 Gene3D G3DSA:1.10.10.10 19 155 1.8E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06245 f9c63364a99743cbccfb6b6a90b2829f 158 PANTHER PTHR33164 10 150 2.1E-25 T 23-04-2016 RBRH_RS06245 f9c63364a99743cbccfb6b6a90b2829f 158 SMART SM00347 39 139 2.1E-25 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS01650 8cb1f4bdf11567c7ed78547097bddb8a 138 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 138 1.3E-40 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 RBRH_RS01650 8cb1f4bdf11567c7ed78547097bddb8a 138 PIRSF PIRSF004638 1 138 1.1E-47 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 RBRH_RS01650 8cb1f4bdf11567c7ed78547097bddb8a 138 PANTHER PTHR40255 1 138 3.1E-38 T 23-04-2016 RBRH_RS09740 7c14516e0698b11769fa5fee1f9d4e7b 388 SUPERFAMILY SSF53955 183 309 1.25E-21 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS09740 7c14516e0698b11769fa5fee1f9d4e7b 388 PANTHER PTHR21666 177 296 7.3E-18 T 23-04-2016 RBRH_RS09740 7c14516e0698b11769fa5fee1f9d4e7b 388 Gene3D G3DSA:1.10.530.10 202 313 2.5E-20 T 23-04-2016 RBRH_RS09740 7c14516e0698b11769fa5fee1f9d4e7b 388 Pfam PF01464 Transglycosylase SLT domain 202 278 3.2E-15 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 RBRH_RS04105 53c7c80bf3fdcc91bebc811236126d2a 98 SUPERFAMILY SSF143011 21 89 2.09E-8 T 23-04-2016 RBRH_RS04105 53c7c80bf3fdcc91bebc811236126d2a 98 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 98 1.0E-20 T 23-04-2016 IPR007711 Toxin HigB-1 RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 Gene3D G3DSA:3.10.580.10 198 323 7.2E-37 T 23-04-2016 RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 Pfam PF01380 SIS domain 43 175 1.8E-32 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 Gene3D G3DSA:3.40.50.10490 14 197 1.7E-54 T 23-04-2016 RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 PANTHER PTHR38418 1 200 5.5E-40 T 23-04-2016 RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 317 9.6E-112 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 PIRSF PIRSF004692 2 327 1.2E-129 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 SUPERFAMILY SSF53697 11 325 3.11E-70 T 23-04-2016 RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 PANTHER PTHR38418:SF1 1 200 5.5E-40 T 23-04-2016 RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 SMART SM00116 213 261 2.7 T 23-04-2016 IPR000644 CBS domain RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 SMART SM00116 278 326 5.7 T 23-04-2016 IPR000644 CBS domain RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 Pfam PF00571 CBS domain 272 324 1.3E-5 T 23-04-2016 IPR000644 CBS domain RBRH_RS10990 daf078ea2989c7d702ca3889024b5315 327 Pfam PF00571 CBS domain 204 261 5.7E-5 T 23-04-2016 IPR000644 CBS domain RBRH_RS07270 f8fb274bdd37b83c5f53e59d3f08e07c 440 PANTHER PTHR33803 8 429 6.5E-166 T 23-04-2016 RBRH_RS07270 f8fb274bdd37b83c5f53e59d3f08e07c 440 Pfam PF01609 Transposase DDE domain 281 383 1.4E-5 T 23-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RBRH_RS07270 f8fb274bdd37b83c5f53e59d3f08e07c 440 PANTHER PTHR33803:SF1 8 429 6.5E-166 T 23-04-2016 RBRH_RS07270 f8fb274bdd37b83c5f53e59d3f08e07c 440 Pfam PF05598 Transposase domain (DUF772) 52 126 3.7E-18 T 23-04-2016 IPR008490 Transposase InsH, N-terminal RBRH_RS11950 d5c209f7ba3b79a58e38349913a985e1 488 Pfam PF00646 F-box domain 66 104 2.4E-4 T 23-04-2016 IPR001810 F-box domain GO:0005515 RBRH_RS00295 7f60cde8012f0d0c211892738fc5702e 542 Gene3D G3DSA:3.40.50.300 379 535 4.0E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00295 7f60cde8012f0d0c211892738fc5702e 542 Pfam PF08378 Nuclease-related domain 19 111 7.3E-7 T 23-04-2016 IPR011528 Nuclease-related domain, NERD RBRH_RS00295 7f60cde8012f0d0c211892738fc5702e 542 SUPERFAMILY SSF52540 222 534 2.25E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00295 7f60cde8012f0d0c211892738fc5702e 542 Gene3D G3DSA:3.40.50.300 222 378 7.5E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS00295 7f60cde8012f0d0c211892738fc5702e 542 Pfam PF13538 UvrD-like helicase C-terminal domain 486 530 2.0E-12 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain RBRH_RS16250 e438db74d8018922f2bd4752a88a413e 68 Gene3D G3DSA:3.40.50.720 8 48 5.5E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS16250 e438db74d8018922f2bd4752a88a413e 68 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 45 9.2E-5 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RBRH_RS11530 7fe5b133e1621a6f05384fd880374be2 489 Gene3D G3DSA:3.40.50.1820 145 388 8.5E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS11530 7fe5b133e1621a6f05384fd880374be2 489 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 162 287 2.1E-8 T 23-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RBRH_RS11530 7fe5b133e1621a6f05384fd880374be2 489 SUPERFAMILY SSF53474 151 388 4.12E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08905 77cc38ed8b38f5fcae97cbbeadc5987e 380 Gene3D G3DSA:3.40.630.10 103 348 2.9E-43 T 23-04-2016 RBRH_RS08905 77cc38ed8b38f5fcae97cbbeadc5987e 380 PANTHER PTHR12756:SF18 1 309 2.6E-85 T 23-04-2016 RBRH_RS08905 77cc38ed8b38f5fcae97cbbeadc5987e 380 SUPERFAMILY SSF53187 108 353 4.63E-54 T 23-04-2016 RBRH_RS08905 77cc38ed8b38f5fcae97cbbeadc5987e 380 Pfam PF00246 Zinc carboxypeptidase 121 346 4.1E-19 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RBRH_RS08905 77cc38ed8b38f5fcae97cbbeadc5987e 380 SMART SM00631 114 361 7.1E-4 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RBRH_RS08905 77cc38ed8b38f5fcae97cbbeadc5987e 380 PANTHER PTHR12756 1 309 2.6E-85 T 23-04-2016 RBRH_RS11235 210ef6ae9652da146ace3967e4f669b0 255 Gene3D G3DSA:3.40.50.2020 88 253 2.9E-26 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS11235 210ef6ae9652da146ace3967e4f669b0 255 PANTHER PTHR11907 36 254 1.4E-45 T 23-04-2016 RBRH_RS11235 210ef6ae9652da146ace3967e4f669b0 255 PANTHER PTHR11907:SF9 36 254 1.4E-45 T 23-04-2016 RBRH_RS11235 210ef6ae9652da146ace3967e4f669b0 255 SUPERFAMILY SSF53271 78 252 7.47E-31 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS11235 210ef6ae9652da146ace3967e4f669b0 255 Pfam PF00156 Phosphoribosyl transferase domain 160 245 6.7E-9 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RBRH_RS05705 a6c1134c759f6d14075bbd0c904aa58c 517 Pfam PF07690 Major Facilitator Superfamily 27 420 1.0E-32 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS05705 a6c1134c759f6d14075bbd0c904aa58c 517 Gene3D G3DSA:1.20.1250.20 273 434 1.4E-7 T 23-04-2016 RBRH_RS05705 a6c1134c759f6d14075bbd0c904aa58c 517 Gene3D G3DSA:1.20.1250.20 495 511 1.4E-7 T 23-04-2016 RBRH_RS05705 a6c1134c759f6d14075bbd0c904aa58c 517 SUPERFAMILY SSF103473 258 430 6.93E-45 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS05705 a6c1134c759f6d14075bbd0c904aa58c 517 SUPERFAMILY SSF103473 12 206 6.93E-45 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS05705 a6c1134c759f6d14075bbd0c904aa58c 517 SUPERFAMILY SSF103473 490 512 6.93E-45 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS05705 a6c1134c759f6d14075bbd0c904aa58c 517 PANTHER PTHR23501 9 514 7.7E-42 T 23-04-2016 RBRH_RS05705 a6c1134c759f6d14075bbd0c904aa58c 517 Gene3D G3DSA:1.20.1250.20 22 197 2.3E-20 T 23-04-2016 RBRH_RS02250 8f661b94bb3b72210ef85765c09ec2fe 400 PANTHER PTHR14359 1 394 2.3E-164 T 23-04-2016 RBRH_RS02250 8f661b94bb3b72210ef85765c09ec2fe 400 SUPERFAMILY SSF52507 3 181 1.03E-61 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RBRH_RS02250 8f661b94bb3b72210ef85765c09ec2fe 400 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 390 2.0E-126 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 RBRH_RS02250 8f661b94bb3b72210ef85765c09ec2fe 400 PANTHER PTHR14359:SF20 1 394 2.3E-164 T 23-04-2016 RBRH_RS02250 8f661b94bb3b72210ef85765c09ec2fe 400 Gene3D G3DSA:3.40.50.10300 186 394 4.0E-78 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RBRH_RS02250 8f661b94bb3b72210ef85765c09ec2fe 400 SUPERFAMILY SSF102645 173 393 6.67E-69 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RBRH_RS02250 8f661b94bb3b72210ef85765c09ec2fe 400 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 366 1.3E-62 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RBRH_RS02250 8f661b94bb3b72210ef85765c09ec2fe 400 Gene3D G3DSA:3.40.50.1950 2 185 7.5E-68 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RBRH_RS02250 8f661b94bb3b72210ef85765c09ec2fe 400 Pfam PF02441 Flavoprotein 6 134 2.3E-35 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 RBRH_RS01095 8b7166a1aa6e36b6a0f7302370456872 316 SMART SM00559 54 182 5.4E-33 T 23-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 RBRH_RS01095 8b7166a1aa6e36b6a0f7302370456872 316 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 263 31.565 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RBRH_RS01095 8b7166a1aa6e36b6a0f7302370456872 316 PANTHER PTHR41251:SF1 3 313 2.1E-84 T 23-04-2016 RBRH_RS01095 8b7166a1aa6e36b6a0f7302370456872 316 PANTHER PTHR41251 3 313 2.1E-84 T 23-04-2016 RBRH_RS01095 8b7166a1aa6e36b6a0f7302370456872 316 SUPERFAMILY SSF100939 4 265 5.1E-51 T 23-04-2016 IPR016194 SPOC-like, C-terminal domain RBRH_RS01095 8b7166a1aa6e36b6a0f7302370456872 316 Gene3D G3DSA:2.40.290.10 5 180 4.0E-13 T 23-04-2016 IPR016194 SPOC-like, C-terminal domain RBRH_RS01095 8b7166a1aa6e36b6a0f7302370456872 316 PIRSF PIRSF006493 1 308 2.8E-91 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RBRH_RS01095 8b7166a1aa6e36b6a0f7302370456872 316 TIGRFAM TIGR02772 Ku_bact: Ku protein 4 264 9.4E-101 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RBRH_RS01095 8b7166a1aa6e36b6a0f7302370456872 316 Pfam PF02735 Ku70/Ku80 beta-barrel domain 13 195 1.8E-36 T 23-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 RBRH_RS00470 7b7319f5a4844d19383c00d1a10bf756 291 SUPERFAMILY SSF52172 166 285 5.27E-9 T 23-04-2016 IPR011006 CheY-like superfamily RBRH_RS00470 7b7319f5a4844d19383c00d1a10bf756 291 Pfam PF08667 BetR domain 12 155 1.4E-36 T 23-04-2016 IPR013975 Transcription regulator BetR, N-terminal RBRH_RS00470 7b7319f5a4844d19383c00d1a10bf756 291 Gene3D G3DSA:3.40.50.2300 166 283 3.8E-8 T 23-04-2016 RBRH_RS00905 1010536c56907fe2560e6b3b379968b0 129 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 126 2.3E-42 T 23-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 RBRH_RS00905 1010536c56907fe2560e6b3b379968b0 129 SUPERFAMILY SSF55331 2 127 1.71E-41 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily RBRH_RS00905 1010536c56907fe2560e6b3b379968b0 129 PANTHER PTHR37950:SF1 2 128 1.7E-39 T 23-04-2016 RBRH_RS00905 1010536c56907fe2560e6b3b379968b0 129 Gene3D G3DSA:3.30.429.10 2 127 1.9E-51 T 23-04-2016 RBRH_RS00905 1010536c56907fe2560e6b3b379968b0 129 PANTHER PTHR37950 2 128 1.7E-39 T 23-04-2016 RBRH_RS04695 75ab522650b885d065504a05199051df 225 SUPERFAMILY SSF51391 11 220 5.49E-51 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RBRH_RS04695 75ab522650b885d065504a05199051df 225 PANTHER PTHR20857 8 215 1.1E-45 T 23-04-2016 RBRH_RS04695 75ab522650b885d065504a05199051df 225 Pfam PF02581 Thiamine monophosphate synthase/TENI 27 206 1.4E-46 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RBRH_RS04695 75ab522650b885d065504a05199051df 225 Gene3D G3DSA:3.20.20.70 11 221 2.2E-55 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS16095 4955bcc2ab9a77613dd3b011028b82a0 396 Gene3D G3DSA:3.40.50.740 15 179 1.6E-45 T 23-04-2016 RBRH_RS16095 4955bcc2ab9a77613dd3b011028b82a0 396 PANTHER PTHR11615:SF119 23 383 1.3E-121 T 23-04-2016 RBRH_RS16095 4955bcc2ab9a77613dd3b011028b82a0 396 SUPERFAMILY SSF50692 227 363 1.17E-40 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain RBRH_RS16095 4955bcc2ab9a77613dd3b011028b82a0 396 Gene3D G3DSA:2.40.40.20 180 363 5.0E-48 T 23-04-2016 RBRH_RS16095 4955bcc2ab9a77613dd3b011028b82a0 396 SUPERFAMILY SSF53706 224 257 7.85E-52 T 23-04-2016 RBRH_RS16095 4955bcc2ab9a77613dd3b011028b82a0 396 SUPERFAMILY SSF53706 4 196 7.85E-52 T 23-04-2016 RBRH_RS16095 4955bcc2ab9a77613dd3b011028b82a0 396 Pfam PF00384 Molybdopterin oxidoreductase 19 127 3.1E-20 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RBRH_RS16095 4955bcc2ab9a77613dd3b011028b82a0 396 PANTHER PTHR11615 23 383 1.3E-121 T 23-04-2016 RBRH_RS16095 4955bcc2ab9a77613dd3b011028b82a0 396 Pfam PF01568 Molydopterin dinucleotide binding domain 252 359 3.4E-31 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RBRH_RS00855 cd17d6faceed8404c587917e7a7737f0 69 PANTHER PTHR33803 4 62 7.3E-18 T 23-04-2016 RBRH_RS00855 cd17d6faceed8404c587917e7a7737f0 69 Pfam PF01609 Transposase DDE domain 5 63 2.6E-6 T 23-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RBRH_RS00855 cd17d6faceed8404c587917e7a7737f0 69 PANTHER PTHR33803:SF1 4 62 7.3E-18 T 23-04-2016 RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 PANTHER PTHR21248:SF12 487 582 3.1E-120 T 23-04-2016 RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 PANTHER PTHR21248:SF12 4 471 3.1E-120 T 23-04-2016 RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 Gene3D G3DSA:3.30.870.10 392 590 4.4E-34 T 23-04-2016 RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 Gene3D G3DSA:3.30.870.10 136 330 3.4E-36 T 23-04-2016 RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 PANTHER PTHR21248 487 582 3.1E-120 T 23-04-2016 RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 SUPERFAMILY SSF56024 352 549 3.14E-30 T 23-04-2016 RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 PANTHER PTHR21248 4 471 3.1E-120 T 23-04-2016 RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 Pfam PF13091 PLD-like domain 397 539 5.3E-24 T 23-04-2016 IPR025202 Phospholipase D-like domain RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 Pfam PF13091 PLD-like domain 155 304 8.9E-17 T 23-04-2016 IPR025202 Phospholipase D-like domain RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 SUPERFAMILY SSF56024 112 327 6.91E-35 T 23-04-2016 RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 SMART SM00155 486 513 3.1E-4 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RBRH_RS03155 92a327416351fe264b8bc8d6661adbaa 609 SMART SM00155 245 272 5.6E-4 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RBRH_RS11025 da2099c95dd1550b6170d2534e4349aa 151 Gene3D G3DSA:3.40.930.10 1 149 1.3E-44 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RBRH_RS11025 da2099c95dd1550b6170d2534e4349aa 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 148 2.3E-34 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RBRH_RS11025 da2099c95dd1550b6170d2534e4349aa 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RBRH_RS11025 da2099c95dd1550b6170d2534e4349aa 151 PANTHER PTHR30505:SF6 1 151 1.1E-42 T 23-04-2016 RBRH_RS11025 da2099c95dd1550b6170d2534e4349aa 151 PANTHER PTHR30505 1 151 1.1E-42 T 23-04-2016 RBRH_RS11025 da2099c95dd1550b6170d2534e4349aa 151 SUPERFAMILY SSF55804 1 149 5.76E-45 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 RBRH_RS11025 da2099c95dd1550b6170d2534e4349aa 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 4 147 7.3E-42 T 23-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RBRH_RS01765 32732a7f70757fec053f53c9fbc8c092 350 PANTHER PTHR30307:SF0 4 348 7.9E-150 T 23-04-2016 RBRH_RS01765 32732a7f70757fec053f53c9fbc8c092 350 Gene3D G3DSA:2.40.10.240 64 134 4.1E-10 T 23-04-2016 RBRH_RS01765 32732a7f70757fec053f53c9fbc8c092 350 Pfam PF02547 Queuosine biosynthesis protein 4 341 2.5E-125 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01765 32732a7f70757fec053f53c9fbc8c092 350 SUPERFAMILY SSF111337 5 341 1.83E-124 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01765 32732a7f70757fec053f53c9fbc8c092 350 PANTHER PTHR30307 4 348 7.9E-150 T 23-04-2016 RBRH_RS01765 32732a7f70757fec053f53c9fbc8c092 350 Gene3D G3DSA:3.40.1780.10 175 341 3.6E-95 T 23-04-2016 RBRH_RS01765 32732a7f70757fec053f53c9fbc8c092 350 Gene3D G3DSA:3.40.1780.10 3 62 3.6E-95 T 23-04-2016 RBRH_RS01765 32732a7f70757fec053f53c9fbc8c092 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 2 342 43.85 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS01765 32732a7f70757fec053f53c9fbc8c092 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 341 1.5E-118 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RBRH_RS11135 27d5c6830e4ca32e5f0db6c196f006cf 192 Gene3D G3DSA:2.40.160.20 39 192 8.8E-50 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RBRH_RS11135 27d5c6830e4ca32e5f0db6c196f006cf 192 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 60 191 2.9E-27 T 23-04-2016 IPR018550 Lipid A 3-O-deacylase-related RBRH_RS11135 27d5c6830e4ca32e5f0db6c196f006cf 192 PIRSF PIRSF029681 6 192 3.7E-56 T 23-04-2016 IPR018550 Lipid A 3-O-deacylase-related RBRH_RS11135 27d5c6830e4ca32e5f0db6c196f006cf 192 SUPERFAMILY SSF56925 36 192 3.66E-11 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RBRH_RS01370 a46f2f8f0a22c0c7c97668b50137a9de 330 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 37 169 1.2E-29 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RBRH_RS01370 a46f2f8f0a22c0c7c97668b50137a9de 330 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 270 285 3.0E-21 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RBRH_RS01370 a46f2f8f0a22c0c7c97668b50137a9de 330 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 258 269 3.0E-21 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RBRH_RS01370 a46f2f8f0a22c0c7c97668b50137a9de 330 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 247 257 3.0E-21 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RBRH_RS01370 a46f2f8f0a22c0c7c97668b50137a9de 330 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 190 207 3.0E-21 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RBRH_RS01370 a46f2f8f0a22c0c7c97668b50137a9de 330 PANTHER PTHR30487:SF0 104 328 2.3E-84 T 23-04-2016 RBRH_RS01370 a46f2f8f0a22c0c7c97668b50137a9de 330 PANTHER PTHR30487:SF0 22 55 2.3E-84 T 23-04-2016 RBRH_RS01370 a46f2f8f0a22c0c7c97668b50137a9de 330 Pfam PF01478 Type IV leader peptidase family 182 290 3.6E-25 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RBRH_RS01370 a46f2f8f0a22c0c7c97668b50137a9de 330 PANTHER PTHR30487 104 328 2.3E-84 T 23-04-2016 RBRH_RS01370 a46f2f8f0a22c0c7c97668b50137a9de 330 PANTHER PTHR30487 22 55 2.3E-84 T 23-04-2016 RBRH_RS10060 b64bc9ccc54b4b1db52262ca28bbf7de 388 PANTHER PTHR23501:SF4 1 383 2.0E-153 T 23-04-2016 RBRH_RS10060 b64bc9ccc54b4b1db52262ca28bbf7de 388 Gene3D G3DSA:1.20.1250.20 5 179 4.1E-23 T 23-04-2016 RBRH_RS10060 b64bc9ccc54b4b1db52262ca28bbf7de 388 Gene3D G3DSA:1.20.1250.20 197 373 3.9E-16 T 23-04-2016 RBRH_RS10060 b64bc9ccc54b4b1db52262ca28bbf7de 388 PANTHER PTHR23501 1 383 2.0E-153 T 23-04-2016 RBRH_RS10060 b64bc9ccc54b4b1db52262ca28bbf7de 388 Pfam PF07690 Major Facilitator Superfamily 8 318 1.9E-34 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RBRH_RS10060 b64bc9ccc54b4b1db52262ca28bbf7de 388 SUPERFAMILY SSF103473 4 376 6.02E-55 T 23-04-2016 IPR020846 Major facilitator superfamily domain RBRH_RS08850 7ab575e0c601dcc8addb93f74c673f9b 358 SUPERFAMILY SSF51621 28 265 2.17E-44 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS08850 7ab575e0c601dcc8addb93f74c673f9b 358 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 50 255 6.5E-12 T 23-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RBRH_RS08850 7ab575e0c601dcc8addb93f74c673f9b 358 PANTHER PTHR11105:SF0 6 347 2.7E-48 T 23-04-2016 RBRH_RS08850 7ab575e0c601dcc8addb93f74c673f9b 358 Gene3D G3DSA:3.20.20.60 27 266 1.8E-47 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RBRH_RS08850 7ab575e0c601dcc8addb93f74c673f9b 358 PANTHER PTHR11105 6 347 2.7E-48 T 23-04-2016 RBRH_RS00475 8089c7017b791125e6885c94a5b641cd 64 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 59 7.7E-8 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RBRH_RS02715 bab63f4192e2b3bba7059164583658c3 76 SUPERFAMILY SSF56935 14 76 3.0E-6 T 23-04-2016 RBRH_RS02715 bab63f4192e2b3bba7059164583658c3 76 Gene3D G3DSA:2.40.160.10 14 76 2.0E-9 T 23-04-2016 IPR023614 Porin domain RBRH_RS08595 747e0504d8765b20545f01cfa0937521 98 PIRSF PIRSF028744 1 98 1.1E-34 T 23-04-2016 IPR014056 Addiction module killer protein, predicted RBRH_RS08595 747e0504d8765b20545f01cfa0937521 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 91 1.5E-5 T 23-04-2016 IPR009241 Toxin HigB-like RBRH_RS08595 747e0504d8765b20545f01cfa0937521 98 PANTHER PTHR41791 1 98 1.9E-20 T 23-04-2016 RBRH_RS08595 747e0504d8765b20545f01cfa0937521 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 95 3.4E-34 T 23-04-2016 IPR014056 Addiction module killer protein, predicted RBRH_RS08595 747e0504d8765b20545f01cfa0937521 98 PANTHER PTHR41791:SF1 1 98 1.9E-20 T 23-04-2016 RBRH_RS00640 5c14b664616fc249985db46df3f809b4 93 Pfam PF08681 Protein of unknown function (DUF1778) 9 86 4.8E-28 T 23-04-2016 IPR014795 Vibrio phage ICP1, Orf50 RBRH_RS00640 5c14b664616fc249985db46df3f809b4 93 PANTHER PTHR35401 2 93 6.5E-26 T 23-04-2016 RBRH_RS00640 5c14b664616fc249985db46df3f809b4 93 PANTHER PTHR35401:SF2 2 93 6.5E-26 T 23-04-2016 RBRH_RS00640 5c14b664616fc249985db46df3f809b4 93 Gene3D G3DSA:1.20.5.780 6 89 8.3E-30 T 23-04-2016 RBRH_RS00640 5c14b664616fc249985db46df3f809b4 93 SUPERFAMILY SSF47598 6 83 8.9E-24 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RBRH_RS00505 42eb300d97ccc3c76f37884a1448c7f8 380 PANTHER PTHR10283 50 380 3.6E-32 T 23-04-2016 RBRH_RS00505 42eb300d97ccc3c76f37884a1448c7f8 380 Pfam PF03600 Citrate transporter 29 318 1.8E-18 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 RBRH_RS00505 42eb300d97ccc3c76f37884a1448c7f8 380 PANTHER PTHR10283:SF95 50 380 3.6E-32 T 23-04-2016 RBRH_RS06900 6fa034584a81b2fc07c19df31cd351b0 257 SMART SM00382 100 237 6.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS06900 6fa034584a81b2fc07c19df31cd351b0 257 SUPERFAMILY SSF52540 68 232 1.05E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06900 6fa034584a81b2fc07c19df31cd351b0 257 PIRSF PIRSF003073 1 252 9.1E-81 T 23-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RBRH_RS06900 6fa034584a81b2fc07c19df31cd351b0 257 Gene3D G3DSA:3.40.50.300 70 233 1.5E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS06900 6fa034584a81b2fc07c19df31cd351b0 257 Pfam PF01695 IstB-like ATP binding protein 56 234 2.2E-62 T 23-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 RBRH_RS06900 6fa034584a81b2fc07c19df31cd351b0 257 PANTHER PTHR30050 2 249 1.5E-62 T 23-04-2016 RBRH_RS16270 530328bef27b4d3755156711ab71264d 282 Pfam PF16074 Type IV Pilus-assembly protein W 169 276 2.6E-12 T 23-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RBRH_RS04645 a42744bfc6d67219e1d1d51a6f0437c6 228 SUPERFAMILY SSF143422 3 127 2.09E-22 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RBRH_RS04645 a42744bfc6d67219e1d1d51a6f0437c6 228 SMART SM01321 9 124 3.8E-30 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RBRH_RS04645 a42744bfc6d67219e1d1d51a6f0437c6 228 Gene3D G3DSA:3.30.70.1290 10 109 3.7E-5 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RBRH_RS04645 a42744bfc6d67219e1d1d51a6f0437c6 228 PANTHER PTHR34322 2 147 1.2E-23 T 23-04-2016 RBRH_RS04645 a42744bfc6d67219e1d1d51a6f0437c6 228 Pfam PF01797 Transposase IS200 like 14 110 2.2E-8 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RBRH_RS04645 a42744bfc6d67219e1d1d51a6f0437c6 228 PANTHER PTHR34322:SF1 2 147 1.2E-23 T 23-04-2016 RBRH_RS07510 c89a896c14b8a0833c402c304b320bde 139 Pfam PF01527 Transposase 5 58 1.4E-7 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS07510 c89a896c14b8a0833c402c304b320bde 139 SUPERFAMILY SSF46689 3 58 9.68E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS07510 c89a896c14b8a0833c402c304b320bde 139 Gene3D G3DSA:1.10.10.60 3 72 4.5E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS10815 09357834702ed6c860ba754b9b1cf57d 156 Pfam PF00293 NUDIX domain 9 144 4.2E-13 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RBRH_RS10815 09357834702ed6c860ba754b9b1cf57d 156 PANTHER PTHR22769:SF28 6 146 1.0E-25 T 23-04-2016 RBRH_RS10815 09357834702ed6c860ba754b9b1cf57d 156 PANTHER PTHR22769 6 146 1.0E-25 T 23-04-2016 RBRH_RS10815 09357834702ed6c860ba754b9b1cf57d 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 5 22 7.2E-9 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RBRH_RS10815 09357834702ed6c860ba754b9b1cf57d 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 133 146 7.2E-9 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RBRH_RS10815 09357834702ed6c860ba754b9b1cf57d 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 76 95 7.2E-9 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RBRH_RS10815 09357834702ed6c860ba754b9b1cf57d 156 Gene3D G3DSA:3.90.79.10 2 151 1.3E-23 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS10815 09357834702ed6c860ba754b9b1cf57d 156 SUPERFAMILY SSF55811 4 153 3.66E-23 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RBRH_RS03220 0d956cb4485ad86c21d72299eabadf51 108 Gene3D G3DSA:3.40.50.720 37 64 3.0E-5 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS03220 0d956cb4485ad86c21d72299eabadf51 108 SUPERFAMILY SSF51735 35 89 2.65E-5 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS01495 1d9b2f9e5c31de77116f9fd4d3bd3ad3 312 PANTHER PTHR10584 4 304 1.6E-92 T 23-04-2016 RBRH_RS01495 1d9b2f9e5c31de77116f9fd4d3bd3ad3 312 Gene3D G3DSA:3.40.1190.20 4 303 2.6E-50 T 23-04-2016 IPR029056 Ribokinase-like RBRH_RS01495 1d9b2f9e5c31de77116f9fd4d3bd3ad3 312 Pfam PF00294 pfkB family carbohydrate kinase 36 291 7.2E-38 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB RBRH_RS01495 1d9b2f9e5c31de77116f9fd4d3bd3ad3 312 PANTHER PTHR10584:SF15 4 304 1.6E-92 T 23-04-2016 RBRH_RS01495 1d9b2f9e5c31de77116f9fd4d3bd3ad3 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RBRH_RS01495 1d9b2f9e5c31de77116f9fd4d3bd3ad3 312 SUPERFAMILY SSF53613 4 295 2.34E-58 T 23-04-2016 IPR029056 Ribokinase-like RBRH_RS01495 1d9b2f9e5c31de77116f9fd4d3bd3ad3 312 PRINTS PR00990 Ribokinase signature 217 228 1.4E-5 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RBRH_RS01495 1d9b2f9e5c31de77116f9fd4d3bd3ad3 312 PRINTS PR00990 Ribokinase signature 42 61 1.4E-5 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RBRH_RS01495 1d9b2f9e5c31de77116f9fd4d3bd3ad3 312 PRINTS PR00990 Ribokinase signature 181 196 1.4E-5 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RBRH_RS07680 0b162fe23e0d273c3c7accd9db4c3dc3 95 SUPERFAMILY SSF160272 1 88 4.18E-16 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RBRH_RS07680 0b162fe23e0d273c3c7accd9db4c3dc3 95 Pfam PF07369 Protein of unknown function (DUF1488) 3 80 4.0E-21 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RBRH_RS07680 0b162fe23e0d273c3c7accd9db4c3dc3 95 Gene3D G3DSA:3.30.160.140 1 72 3.5E-11 T 23-04-2016 IPR009962 Protein of unknown function DUF1488 RBRH_RS02910 b3284d8d313c87e0cb653af6fbee232d 115 SUPERFAMILY SSF56784 11 79 2.5E-16 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS02910 b3284d8d313c87e0cb653af6fbee232d 115 Pfam PF13242 HAD-hyrolase-like 14 74 7.5E-7 T 23-04-2016 RBRH_RS02910 b3284d8d313c87e0cb653af6fbee232d 115 Gene3D G3DSA:3.40.50.1000 10 78 2.6E-15 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS02910 b3284d8d313c87e0cb653af6fbee232d 115 PANTHER PTHR18901 9 103 1.9E-22 T 23-04-2016 RBRH_RS02910 b3284d8d313c87e0cb653af6fbee232d 115 PANTHER PTHR18901:SF24 9 103 1.9E-22 T 23-04-2016 RBRH_RS01905 2fb0d7f51fc707d3af300b4b853b70b2 180 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 131 2.4E-35 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RBRH_RS01905 2fb0d7f51fc707d3af300b4b853b70b2 180 Gene3D G3DSA:3.30.70.560 3 144 2.2E-49 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RBRH_RS01905 2fb0d7f51fc707d3af300b4b853b70b2 180 SUPERFAMILY SSF55083 1 146 1.83E-47 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RBRH_RS01905 2fb0d7f51fc707d3af300b4b853b70b2 180 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 131 8.4E-39 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RBRH_RS01905 2fb0d7f51fc707d3af300b4b853b70b2 180 PANTHER PTHR20941 1 141 6.3E-51 T 23-04-2016 RBRH_RS01905 2fb0d7f51fc707d3af300b4b853b70b2 180 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RBRH_RS11825 714481a62f363ea702bd816b7309be96 121 PANTHER PTHR37309:SF1 1 120 1.4E-36 T 23-04-2016 RBRH_RS11825 714481a62f363ea702bd816b7309be96 121 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 1.1E-33 T 23-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV RBRH_RS11825 714481a62f363ea702bd816b7309be96 121 PANTHER PTHR37309 1 120 1.4E-36 T 23-04-2016 RBRH_RS09380 9e407b272cc714f2fd9323e89207e340 143 Pfam PF08897 Domain of unknown function (DUF1841) 5 137 1.4E-59 T 23-04-2016 IPR014993 Protein of unknown function DUF1841 RBRH_RS11000 b5e605caba9a26fd0518e37d09c96051 201 PANTHER PTHR37481 3 194 3.3E-18 T 23-04-2016 RBRH_RS11000 b5e605caba9a26fd0518e37d09c96051 201 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 9 186 5.0E-47 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 RBRH_RS11000 b5e605caba9a26fd0518e37d09c96051 201 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 12 187 8.9E-42 T 23-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related RBRH_RS11000 b5e605caba9a26fd0518e37d09c96051 201 Gene3D G3DSA:2.60.450.10 98 183 7.2E-6 T 23-04-2016 RBRH_RS11000 b5e605caba9a26fd0518e37d09c96051 201 PANTHER PTHR37481:SF1 3 194 3.3E-18 T 23-04-2016 RBRH_RS08780 356fbe9c43b26cc5727dbd7751f34394 266 PANTHER PTHR11142 1 245 1.6E-92 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS08780 356fbe9c43b26cc5727dbd7751f34394 266 Gene3D G3DSA:3.30.70.580 1 104 3.2E-36 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS08780 356fbe9c43b26cc5727dbd7751f34394 266 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.588 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS08780 356fbe9c43b26cc5727dbd7751f34394 266 Pfam PF01416 tRNA pseudouridine synthase 142 244 2.3E-28 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS08780 356fbe9c43b26cc5727dbd7751f34394 266 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.2E-8 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS08780 356fbe9c43b26cc5727dbd7751f34394 266 SUPERFAMILY SSF55120 1 249 1.73E-90 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS08780 356fbe9c43b26cc5727dbd7751f34394 266 Gene3D G3DSA:3.30.70.660 106 241 5.6E-47 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS08780 356fbe9c43b26cc5727dbd7751f34394 266 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 4.2E-63 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS08780 356fbe9c43b26cc5727dbd7751f34394 266 PIRSF PIRSF001430 1 249 1.0E-77 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RBRH_RS09045 402500f925acaf3a0c73ce4adaab1daa 354 PANTHER PTHR11432 6 354 7.0E-163 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RBRH_RS09045 402500f925acaf3a0c73ce4adaab1daa 354 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 232 245 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 RBRH_RS09045 402500f925acaf3a0c73ce4adaab1daa 354 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 20 349 24.816 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RBRH_RS09045 402500f925acaf3a0c73ce4adaab1daa 354 PANTHER PTHR11432:SF3 6 354 7.0E-163 T 23-04-2016 RBRH_RS09045 402500f925acaf3a0c73ce4adaab1daa 354 Pfam PF00146 NADH dehydrogenase 27 342 8.9E-127 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RBRH_RS09705 0ebee6a67d66e472ae982c4f6005fc71 211 Pfam PF00677 Lumazine binding domain 3 89 5.8E-16 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09705 0ebee6a67d66e472ae982c4f6005fc71 211 Pfam PF00677 Lumazine binding domain 102 190 6.2E-23 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09705 0ebee6a67d66e472ae982c4f6005fc71 211 SUPERFAMILY SSF63380 95 202 1.45E-32 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RBRH_RS09705 0ebee6a67d66e472ae982c4f6005fc71 211 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 204 2.0E-57 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09705 0ebee6a67d66e472ae982c4f6005fc71 211 Gene3D G3DSA:2.40.30.20 107 204 3.5E-33 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS09705 0ebee6a67d66e472ae982c4f6005fc71 211 Gene3D G3DSA:2.40.30.20 5 106 7.0E-25 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RBRH_RS09705 0ebee6a67d66e472ae982c4f6005fc71 211 PANTHER PTHR21098 1 200 6.5E-84 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09705 0ebee6a67d66e472ae982c4f6005fc71 211 PIRSF PIRSF000498 1 210 1.2E-70 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS09705 0ebee6a67d66e472ae982c4f6005fc71 211 SUPERFAMILY SSF63380 1 95 1.79E-18 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RBRH_RS04925 da93a946419868b65ffb98f5a613ba90 145 Pfam PF00083 Sugar (and other) transporter 2 94 2.5E-5 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RBRH_RS11750 fd2f093ed7fdd9b43568fd8dc8de700f 170 Pfam PF13463 Winged helix DNA-binding domain 52 117 1.8E-21 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS11750 fd2f093ed7fdd9b43568fd8dc8de700f 170 SUPERFAMILY SSF46785 24 156 4.29E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS11750 fd2f093ed7fdd9b43568fd8dc8de700f 170 PIRSF PIRSF036158 1 170 7.3E-64 T 23-04-2016 IPR014601 Transcriptional regulator with MarR-type HTH domain RBRH_RS11750 fd2f093ed7fdd9b43568fd8dc8de700f 170 Gene3D G3DSA:1.10.10.10 34 158 8.3E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 Gene3D G3DSA:3.40.50.2000 270 410 3.3E-6 T 23-04-2016 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 4.1E-63 T 23-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 Pfam PF00534 Glycosyl transferases group 1 310 411 1.8E-8 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 PANTHER PTHR23417 318 437 1.4E-92 T 23-04-2016 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 PANTHER PTHR23417 1 114 1.4E-92 T 23-04-2016 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 PANTHER PTHR23417 193 299 1.4E-92 T 23-04-2016 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 PANTHER PTHR23417 133 143 1.4E-92 T 23-04-2016 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 SUPERFAMILY SSF53756 60 283 1.1E-13 T 23-04-2016 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 SUPERFAMILY SSF53756 310 433 1.1E-13 T 23-04-2016 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 PANTHER PTHR23417:SF2 318 437 1.4E-92 T 23-04-2016 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 PANTHER PTHR23417:SF2 1 114 1.4E-92 T 23-04-2016 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 PANTHER PTHR23417:SF2 193 299 1.4E-92 T 23-04-2016 RBRH_RS09820 fe411526f31bdcaa4cfea1fb96fb4378 438 PANTHER PTHR23417:SF2 133 143 1.4E-92 T 23-04-2016 RBRH_RS02365 bac6a6d066d74fa5f4aee7eff4fc3bd8 369 PANTHER PTHR10366 164 364 1.9E-22 T 23-04-2016 RBRH_RS02365 bac6a6d066d74fa5f4aee7eff4fc3bd8 369 SUPERFAMILY SSF51735 162 365 9.86E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS02365 bac6a6d066d74fa5f4aee7eff4fc3bd8 369 PANTHER PTHR10366:SF430 164 364 1.9E-22 T 23-04-2016 RBRH_RS02365 bac6a6d066d74fa5f4aee7eff4fc3bd8 369 Gene3D G3DSA:3.40.50.720 169 351 7.8E-12 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS08950 973fb87031be03c7587ae4a4bb4c3fc4 216 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 11 207 39.725 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RBRH_RS08950 973fb87031be03c7587ae4a4bb4c3fc4 216 SUPERFAMILY SSF142695 12 182 1.7E-60 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RBRH_RS08950 973fb87031be03c7587ae4a4bb4c3fc4 216 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 17 204 5.4E-69 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RBRH_RS08950 973fb87031be03c7587ae4a4bb4c3fc4 216 PANTHER PTHR21327 13 210 1.3E-94 T 23-04-2016 RBRH_RS08950 973fb87031be03c7587ae4a4bb4c3fc4 216 Pfam PF00925 GTP cyclohydrolase II 16 180 1.4E-64 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RBRH_RS08610 ac421f027ca07328c1125eaeff64950d 218 Gene3D G3DSA:1.20.1280.50 24 59 4.4E-6 T 23-04-2016 RBRH_RS08610 ac421f027ca07328c1125eaeff64950d 218 Pfam PF00646 F-box domain 30 59 5.7E-4 T 23-04-2016 IPR001810 F-box domain GO:0005515 RBRH_RS08610 ac421f027ca07328c1125eaeff64950d 218 SUPERFAMILY SSF81383 14 60 2.09E-8 T 23-04-2016 IPR001810 F-box domain GO:0005515 RBRH_RS08910 bc16696226a93dae081dc181133e73f0 260 PANTHER PTHR30283:SF3 2 256 8.7E-100 T 23-04-2016 RBRH_RS08910 bc16696226a93dae081dc181133e73f0 260 PANTHER PTHR30283 2 256 8.7E-100 T 23-04-2016 RBRH_RS08910 bc16696226a93dae081dc181133e73f0 260 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 257 35.031 T 23-04-2016 IPR005583 Peroxide stress protein YaaA RBRH_RS08910 bc16696226a93dae081dc181133e73f0 260 Pfam PF03883 Protein of unknown function (DUF328) 1 245 2.4E-84 T 23-04-2016 IPR005583 Peroxide stress protein YaaA RBRH_RS16130 4e2fa35325255250a9004bf6fd653568 131 SUPERFAMILY SSF53933 55 120 7.94E-17 T 23-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RBRH_RS16130 4e2fa35325255250a9004bf6fd653568 131 Pfam PF00545 ribonuclease 63 123 2.5E-10 T 23-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 RBRH_RS16130 4e2fa35325255250a9004bf6fd653568 131 Gene3D G3DSA:3.10.450.30 55 120 1.8E-17 T 23-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RBRH_RS03065 10fa49d93f2a6f78f59e4f54e5ff8b0b 169 Pfam PF05154 TM2 domain 21 70 1.0E-9 T 23-04-2016 IPR007829 TM2 domain RBRH_RS03100 852361c6c54646572a295997da6e3ed9 312 Pfam PF03186 CobD/Cbib protein 7 255 1.1E-22 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RBRH_RS03100 852361c6c54646572a295997da6e3ed9 312 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 312 65.396 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RBRH_RS03100 852361c6c54646572a295997da6e3ed9 312 PANTHER PTHR38684 283 312 1.6E-23 T 23-04-2016 RBRH_RS03100 852361c6c54646572a295997da6e3ed9 312 PANTHER PTHR38684 2 263 1.6E-23 T 23-04-2016 RBRH_RS00940 ce8a71d6b842e5031790cfd2b5324728 256 Gene3D G3DSA:3.40.50.80 98 255 4.2E-44 T 23-04-2016 RBRH_RS00940 ce8a71d6b842e5031790cfd2b5324728 256 Gene3D G3DSA:2.40.30.10 5 97 1.9E-31 T 23-04-2016 RBRH_RS00940 ce8a71d6b842e5031790cfd2b5324728 256 PANTHER PTHR19370:SF98 5 240 4.9E-118 T 23-04-2016 RBRH_RS00940 ce8a71d6b842e5031790cfd2b5324728 256 SUPERFAMILY SSF63380 4 99 8.78E-26 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RBRH_RS00940 ce8a71d6b842e5031790cfd2b5324728 256 PANTHER PTHR19370 5 240 4.9E-118 T 23-04-2016 RBRH_RS00940 ce8a71d6b842e5031790cfd2b5324728 256 SUPERFAMILY SSF52343 103 254 1.09E-38 T 23-04-2016 RBRH_RS00940 ce8a71d6b842e5031790cfd2b5324728 256 Pfam PF00970 Oxidoreductase FAD-binding domain 19 98 2.2E-7 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RBRH_RS00940 ce8a71d6b842e5031790cfd2b5324728 256 Pfam PF00175 Oxidoreductase NAD-binding domain 112 229 3.2E-8 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RBRH_RS04865 40cdffa3346f0ba0a82551bb65573e1b 193 Gene3D G3DSA:1.20.1280.50 52 102 9.3E-4 T 23-04-2016 RBRH_RS01150 d6d4c8a4b5edb31d075f863a5ed3a010 211 Gene3D G3DSA:3.40.630.30 16 152 2.5E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS01150 d6d4c8a4b5edb31d075f863a5ed3a010 211 Pfam PF00583 Acetyltransferase (GNAT) family 79 149 1.1E-5 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RBRH_RS01150 d6d4c8a4b5edb31d075f863a5ed3a010 211 SUPERFAMILY SSF55729 15 153 2.84E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS08560 f1e64837a47bd5eae74b661393160ea9 225 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 210 3.1E-42 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RBRH_RS08560 f1e64837a47bd5eae74b661393160ea9 225 PANTHER PTHR30625:SF3 5 223 1.6E-68 T 23-04-2016 RBRH_RS08560 f1e64837a47bd5eae74b661393160ea9 225 PANTHER PTHR30625 5 223 1.6E-68 T 23-04-2016 RBRH_RS08560 f1e64837a47bd5eae74b661393160ea9 225 TIGRFAM TIGR02796 tolQ: protein TolQ 8 222 5.4E-88 T 23-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 RBRH_RS00755 44879a907cae3b034efc8c1ee0deb2e7 233 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 7 227 4.5E-41 T 23-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 RBRH_RS00755 44879a907cae3b034efc8c1ee0deb2e7 233 Pfam PF04717 Type VI secretion system, phage-baseplate injector 5 125 4.6E-34 T 23-04-2016 IPR006531 Gp5 N-terminal RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 9.0E-14 T 23-04-2016 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 PANTHER PTHR10986:SF12 2 117 5.4E-62 T 23-04-2016 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 PANTHER PTHR10986 2 117 5.4E-62 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.5E-49 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 Gene3D G3DSA:1.10.1900.20 55 117 2.0E-30 T 23-04-2016 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 SUPERFAMILY SSF74731 2 116 9.16E-50 T 23-04-2016 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.8E-40 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.8E-40 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.8E-40 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.175 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 Pfam PF00453 Ribosomal protein L20 3 109 4.1E-49 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RBRH_RS05315 8c3f3c6763aa4c068a307c76a2f014e3 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RBRH_RS06140 479d05f5044abd6ec0bd0dcda7b86a4e 391 Pfam PF06804 NlpB/DapX lipoprotein 42 386 2.2E-38 T 23-04-2016 IPR010653 NlpB/DapX lipoprotein RBRH_RS04015 6e224f2c6130f162215ed4cfcedd8be2 218 Pfam PF11041 Protein of unknown function (DUF2612) 13 193 3.7E-55 T 23-04-2016 IPR021283 Protein of unknown function DUF2612 RBRH_RS09020 9b1ef35f1cb46c962e663eb1d43e6fbd 498 PANTHER PTHR22773:SF40 1 488 3.8E-202 T 23-04-2016 RBRH_RS09020 9b1ef35f1cb46c962e663eb1d43e6fbd 498 Pfam PF00361 Proton-conducting membrane transporter 134 419 3.9E-77 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RBRH_RS09020 9b1ef35f1cb46c962e663eb1d43e6fbd 498 PANTHER PTHR22773 1 488 3.8E-202 T 23-04-2016 RBRH_RS09020 9b1ef35f1cb46c962e663eb1d43e6fbd 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 1.7E-50 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RBRH_RS09020 9b1ef35f1cb46c962e663eb1d43e6fbd 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 1.7E-50 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RBRH_RS09020 9b1ef35f1cb46c962e663eb1d43e6fbd 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.7E-50 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RBRH_RS09020 9b1ef35f1cb46c962e663eb1d43e6fbd 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 1.7E-50 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RBRH_RS09020 9b1ef35f1cb46c962e663eb1d43e6fbd 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 1.7E-50 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RBRH_RS09020 9b1ef35f1cb46c962e663eb1d43e6fbd 498 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 8 487 2.1E-186 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 RBRH_RS02485 463797856fb9f06d68625b068205eec3 106 Pfam PF05164 Cell division protein ZapA 6 93 3.4E-22 T 23-04-2016 IPR007838 Cell division protein ZapA-like RBRH_RS02485 463797856fb9f06d68625b068205eec3 106 PANTHER PTHR34981 2 99 1.5E-16 T 23-04-2016 RBRH_RS02485 463797856fb9f06d68625b068205eec3 106 Gene3D G3DSA:3.20.20.140 25 101 1.6E-4 T 23-04-2016 RBRH_RS02485 463797856fb9f06d68625b068205eec3 106 SUPERFAMILY SSF102829 5 94 8.63E-21 T 23-04-2016 IPR007838 Cell division protein ZapA-like RBRH_RS02485 463797856fb9f06d68625b068205eec3 106 PANTHER PTHR34981:SF1 2 99 1.5E-16 T 23-04-2016 RBRH_RS05320 5dc416970dc7a5edfd5a9258a1d7a32b 340 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 10 339 45.672 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RBRH_RS05320 5dc416970dc7a5edfd5a9258a1d7a32b 340 Pfam PF01409 tRNA synthetases class II core domain (F) 94 339 2.7E-97 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RBRH_RS05320 5dc416970dc7a5edfd5a9258a1d7a32b 340 Gene3D G3DSA:3.30.930.10 11 339 9.4E-125 T 23-04-2016 RBRH_RS05320 5dc416970dc7a5edfd5a9258a1d7a32b 340 SUPERFAMILY SSF46589 16 101 1.05E-17 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RBRH_RS05320 5dc416970dc7a5edfd5a9258a1d7a32b 340 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 339 4.5E-100 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RBRH_RS05320 5dc416970dc7a5edfd5a9258a1d7a32b 340 SUPERFAMILY SSF55681 94 339 2.39E-75 T 23-04-2016 RBRH_RS05320 5dc416970dc7a5edfd5a9258a1d7a32b 340 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 23 89 1.0E-17 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RBRH_RS05320 5dc416970dc7a5edfd5a9258a1d7a32b 340 PANTHER PTHR11538 94 339 7.9E-92 T 23-04-2016 RBRH_RS06785 523b46bbd73919cc1dc87ece9382e0c1 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 316 8.3E-36 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RBRH_RS06785 523b46bbd73919cc1dc87ece9382e0c1 345 PANTHER PTHR30482:SF2 1 333 4.3E-76 T 23-04-2016 RBRH_RS06785 523b46bbd73919cc1dc87ece9382e0c1 345 PANTHER PTHR30482 1 333 4.3E-76 T 23-04-2016 RBRH_RS11445 15c5018deb9503547f90ca0e344b1ea6 520 Pfam PF11306 Protein of unknown function (DUF3108) 230 451 6.2E-23 T 23-04-2016 IPR021457 Protein of unknown function DUF3108 RBRH_RS04875 06e6dd3488e7a4ec7cc7b901002c5d3e 128 Pfam PF02661 Fic/DOC family 8 86 1.1E-10 T 23-04-2016 IPR003812 Fido domain RBRH_RS04875 06e6dd3488e7a4ec7cc7b901002c5d3e 128 PANTHER PTHR39426:SF1 1 126 6.7E-20 T 23-04-2016 RBRH_RS04875 06e6dd3488e7a4ec7cc7b901002c5d3e 128 SUPERFAMILY SSF140931 52 93 5.1E-5 T 23-04-2016 IPR003812 Fido domain RBRH_RS04875 06e6dd3488e7a4ec7cc7b901002c5d3e 128 PANTHER PTHR39426 1 126 6.7E-20 T 23-04-2016 RBRH_RS04875 06e6dd3488e7a4ec7cc7b901002c5d3e 128 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 12 122 1.5E-16 T 23-04-2016 IPR006440 Death on curing protein GO:0016301 RBRH_RS04875 06e6dd3488e7a4ec7cc7b901002c5d3e 128 PIRSF PIRSF018297 3 127 1.4E-40 T 23-04-2016 IPR006440 Death on curing protein GO:0016301 RBRH_RS05510 f6aa8e5414782281356ba4a0cd599b15 89 Gene3D G3DSA:2.10.70.10 51 89 4.3E-18 T 23-04-2016 RBRH_RS05510 f6aa8e5414782281356ba4a0cd599b15 89 Pfam PF10636 Hemin uptake protein hemP 54 89 1.0E-16 T 23-04-2016 IPR019600 Hemin uptake protein HemP RBRH_RS04535 c875a5c6643604e05fafe7f3e8a422f0 116 Pfam PF03091 CutA1 divalent ion tolerance protein 13 108 7.1E-28 T 23-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RBRH_RS04535 c875a5c6643604e05fafe7f3e8a422f0 116 PANTHER PTHR23419 1 113 6.6E-29 T 23-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RBRH_RS04535 c875a5c6643604e05fafe7f3e8a422f0 116 SUPERFAMILY SSF54913 7 111 7.41E-29 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RBRH_RS04535 c875a5c6643604e05fafe7f3e8a422f0 116 Gene3D G3DSA:3.30.70.830 2 111 1.5E-33 T 23-04-2016 RBRH_RS13095 6865917db9d29117c466c13e93a954a0 465 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 17 27 - T 23-04-2016 IPR018030 Fimbrial membrane usher, conserved site RBRH_RS13095 6865917db9d29117c466c13e93a954a0 465 Pfam PF00577 Outer membrane usher protein 1 430 3.3E-50 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS13095 6865917db9d29117c466c13e93a954a0 465 PANTHER PTHR30451 1 462 1.4E-59 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RBRH_RS13095 6865917db9d29117c466c13e93a954a0 465 PANTHER PTHR30451:SF8 1 462 1.4E-59 T 23-04-2016 RBRH_RS13095 6865917db9d29117c466c13e93a954a0 465 Gene3D G3DSA:2.40.160.10 66 312 2.9E-5 T 23-04-2016 IPR023614 Porin domain RBRH_RS16405 7a868dd053bd53d703f57878458dca3a 129 PANTHER PTHR10937 2 129 3.1E-40 T 23-04-2016 RBRH_RS16405 7a868dd053bd53d703f57878458dca3a 129 PANTHER PTHR10937:SF0 2 129 3.1E-40 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RBRH_RS16405 7a868dd053bd53d703f57878458dca3a 129 SUPERFAMILY SSF53697 56 129 1.33E-8 T 23-04-2016 RBRH_RS16405 7a868dd053bd53d703f57878458dca3a 129 Gene3D G3DSA:3.60.20.10 1 129 1.6E-22 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS16405 7a868dd053bd53d703f57878458dca3a 129 SUPERFAMILY SSF56235 2 86 5.27E-10 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RBRH_RS05410 243198df58b7e2eee8f9a561ba1cefb6 285 ProSitePatterns PS60000 Chitosanases families 46 and 80 active sites signature. 63 103 - T 23-04-2016 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 RBRH_RS05410 243198df58b7e2eee8f9a561ba1cefb6 285 Gene3D G3DSA:3.30.386.10 29 173 1.1E-56 T 23-04-2016 IPR023099 Glycoside hydrolase, family 46, N-terminal GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 RBRH_RS05410 243198df58b7e2eee8f9a561ba1cefb6 285 Pfam PF01374 Glycosyl hydrolase family 46 57 96 8.2E-9 T 23-04-2016 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 RBRH_RS05410 243198df58b7e2eee8f9a561ba1cefb6 285 Pfam PF01374 Glycosyl hydrolase family 46 147 271 4.8E-9 T 23-04-2016 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 RBRH_RS05410 243198df58b7e2eee8f9a561ba1cefb6 285 PIRSF PIRSF036551 12 285 1.4E-97 T 23-04-2016 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 RBRH_RS05410 243198df58b7e2eee8f9a561ba1cefb6 285 SUPERFAMILY SSF53955 29 284 1.46E-89 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS05410 243198df58b7e2eee8f9a561ba1cefb6 285 Gene3D G3DSA:1.20.141.10 174 284 6.1E-64 T 23-04-2016 RBRH_RS05585 308aaa725a3b4a9d0f82ba8112e43069 342 PANTHER PTHR35004 1 340 2.6E-107 T 23-04-2016 RBRH_RS05585 308aaa725a3b4a9d0f82ba8112e43069 342 PANTHER PTHR35004:SF1 1 340 2.6E-107 T 23-04-2016 RBRH_RS05585 308aaa725a3b4a9d0f82ba8112e43069 342 Gene3D G3DSA:3.30.420.10 118 288 6.6E-14 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS05585 308aaa725a3b4a9d0f82ba8112e43069 342 Pfam PF13936 Helix-turn-helix domain 11 37 4.1E-7 T 23-04-2016 IPR025246 Transposase IS30-like HTH domain RBRH_RS05585 308aaa725a3b4a9d0f82ba8112e43069 342 Gene3D G3DSA:1.10.10.60 9 39 1.2E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS05585 308aaa725a3b4a9d0f82ba8112e43069 342 SUPERFAMILY SSF46689 2 41 1.08E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS05585 308aaa725a3b4a9d0f82ba8112e43069 342 Pfam PF00665 Integrase core domain 117 240 6.8E-25 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RBRH_RS05585 308aaa725a3b4a9d0f82ba8112e43069 342 SUPERFAMILY SSF53098 117 289 3.19E-19 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RBRH_RS06550 ff766e86820b13eeb1ed20ab09928891 108 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 85 1.3E-7 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RBRH_RS06565 3496335efb8086d6cf642ced5c335335 145 PANTHER PTHR12901:SF7 1 145 1.6E-49 T 23-04-2016 RBRH_RS06565 3496335efb8086d6cf642ced5c335335 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 2.6E-30 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain RBRH_RS06565 3496335efb8086d6cf642ced5c335335 145 SUPERFAMILY SSF55961 1 143 6.97E-36 T 23-04-2016 RBRH_RS06565 3496335efb8086d6cf642ced5c335335 145 PANTHER PTHR12901 1 145 1.6E-49 T 23-04-2016 RBRH_RS06565 3496335efb8086d6cf642ced5c335335 145 Gene3D G3DSA:3.30.530.20 1 144 2.2E-45 T 23-04-2016 IPR023393 START-like domain RBRH_RS09800 092d413002471bbdd7f629a7a85ae8ab 86 Pfam PF03692 Putative zinc- or iron-chelating domain 3 60 2.9E-5 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein RBRH_RS09800 092d413002471bbdd7f629a7a85ae8ab 86 PANTHER PTHR36931 1 84 1.9E-33 T 23-04-2016 RBRH_RS00805 2288dd6022a355bbe04997e17375801b 268 Gene3D G3DSA:1.10.101.10 2 66 3.7E-18 T 23-04-2016 IPR002477 Peptidoglycan binding-like RBRH_RS00805 2288dd6022a355bbe04997e17375801b 268 Pfam PF11860 Protein of unknown function (DUF3380) 90 260 4.1E-66 T 23-04-2016 IPR024408 Domain of unknown function DUF3380 RBRH_RS00805 2288dd6022a355bbe04997e17375801b 268 Pfam PF01471 Putative peptidoglycan binding domain 11 64 6.4E-13 T 23-04-2016 IPR002477 Peptidoglycan binding-like RBRH_RS00805 2288dd6022a355bbe04997e17375801b 268 SUPERFAMILY SSF47090 3 65 4.71E-16 T 23-04-2016 IPR002477 Peptidoglycan binding-like RBRH_RS04680 a2c64badc2cd71f31d69056d05ab1771 373 Gene3D G3DSA:3.30.9.10 150 295 3.1E-21 T 23-04-2016 RBRH_RS04680 a2c64badc2cd71f31d69056d05ab1771 373 SUPERFAMILY SSF51905 1 264 1.73E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04680 a2c64badc2cd71f31d69056d05ab1771 373 Gene3D G3DSA:3.50.50.60 2 40 3.1E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RBRH_RS04680 a2c64badc2cd71f31d69056d05ab1771 373 Pfam PF01266 FAD dependent oxidoreductase 3 332 2.7E-30 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RBRH_RS11665 c3ee512fe6669f86f7b6c418011b388c 145 Pfam PF02021 Uncharacterised protein family UPF0102 31 125 1.0E-23 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 RBRH_RS11665 c3ee512fe6669f86f7b6c418011b388c 145 Hamap MF_00048 UPF0102 protein YraN [yraN]. 23 139 21.456 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 RBRH_RS11665 c3ee512fe6669f86f7b6c418011b388c 145 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 23 140 7.6E-29 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 RBRH_RS11665 c3ee512fe6669f86f7b6c418011b388c 145 Gene3D G3DSA:3.40.1350.10 31 140 1.1E-29 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RBRH_RS11665 c3ee512fe6669f86f7b6c418011b388c 145 SUPERFAMILY SSF52980 24 136 2.68E-18 T 23-04-2016 IPR011335 Restriction endonuclease type II-like RBRH_RS11665 c3ee512fe6669f86f7b6c418011b388c 145 PANTHER PTHR34039:SF1 19 142 8.8E-33 T 23-04-2016 RBRH_RS11665 c3ee512fe6669f86f7b6c418011b388c 145 PANTHER PTHR34039 19 142 8.8E-33 T 23-04-2016 RBRH_RS09660 394c681085907b1736471b3e3d12d353 237 SUPERFAMILY SSF161098 17 175 3.4E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS09660 394c681085907b1736471b3e3d12d353 237 Gene3D G3DSA:1.10.3720.10 14 174 5.4E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS09660 394c681085907b1736471b3e3d12d353 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 173 4.6E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RBRH_RS09660 394c681085907b1736471b3e3d12d353 237 PANTHER PTHR30450:SF5 1 174 3.3E-112 T 23-04-2016 RBRH_RS09660 394c681085907b1736471b3e3d12d353 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 6.2E-15 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RBRH_RS09660 394c681085907b1736471b3e3d12d353 237 PANTHER PTHR30450 1 174 3.3E-112 T 23-04-2016 RBRH_RS11695 48624fb35ee3a1ad63ab16780ff205c3 377 PANTHER PTHR12526 80 366 1.2E-48 T 23-04-2016 RBRH_RS11695 48624fb35ee3a1ad63ab16780ff205c3 377 PANTHER PTHR12526 10 62 1.2E-48 T 23-04-2016 RBRH_RS11695 48624fb35ee3a1ad63ab16780ff205c3 377 PANTHER PTHR12526:SF373 80 366 1.2E-48 T 23-04-2016 RBRH_RS11695 48624fb35ee3a1ad63ab16780ff205c3 377 PANTHER PTHR12526:SF373 10 62 1.2E-48 T 23-04-2016 RBRH_RS11695 48624fb35ee3a1ad63ab16780ff205c3 377 Pfam PF13692 Glycosyl transferases group 1 190 330 5.6E-22 T 23-04-2016 RBRH_RS11695 48624fb35ee3a1ad63ab16780ff205c3 377 Pfam PF13477 Glycosyl transferase 4-like 3 145 1.0E-16 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RBRH_RS11695 48624fb35ee3a1ad63ab16780ff205c3 377 Gene3D G3DSA:3.40.50.2000 184 345 1.1E-20 T 23-04-2016 RBRH_RS11695 48624fb35ee3a1ad63ab16780ff205c3 377 SUPERFAMILY SSF53756 2 366 2.51E-63 T 23-04-2016 RBRH_RS11155 00ecbc9dbdeece107c4d7f1694c51548 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 6.5E-106 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RBRH_RS11155 00ecbc9dbdeece107c4d7f1694c51548 379 PIRSF PIRSF000267 2 378 7.8E-124 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RBRH_RS11155 00ecbc9dbdeece107c4d7f1694c51548 379 PANTHER PTHR30365 1 379 2.1E-165 T 23-04-2016 RBRH_RS11155 00ecbc9dbdeece107c4d7f1694c51548 379 PANTHER PTHR30365:SF6 1 379 2.1E-165 T 23-04-2016 RBRH_RS11155 00ecbc9dbdeece107c4d7f1694c51548 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 6.6E-148 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RBRH_RS09285 5c632f54a5a47df3183cff06d5eae480 421 ProSitePatterns PS01007 Transposases, Mutator family, signature. 249 273 - T 23-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RBRH_RS09285 5c632f54a5a47df3183cff06d5eae480 421 PANTHER PTHR33217 20 416 8.3E-167 T 23-04-2016 RBRH_RS09285 5c632f54a5a47df3183cff06d5eae480 421 Pfam PF00872 Transposase, Mutator family 27 395 8.5E-121 T 23-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RBRH_RS06735 629a4fdbc20abefa93f5436d65617847 365 PANTHER PTHR32332:SF12 121 365 2.0E-102 T 23-04-2016 RBRH_RS06735 629a4fdbc20abefa93f5436d65617847 365 PANTHER PTHR32332 16 96 2.0E-102 T 23-04-2016 RBRH_RS06735 629a4fdbc20abefa93f5436d65617847 365 Pfam PF03060 Nitronate monooxygenase 29 355 2.7E-55 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RBRH_RS06735 629a4fdbc20abefa93f5436d65617847 365 PANTHER PTHR32332 121 365 2.0E-102 T 23-04-2016 RBRH_RS06735 629a4fdbc20abefa93f5436d65617847 365 SUPERFAMILY SSF51412 17 362 3.82E-52 T 23-04-2016 RBRH_RS06735 629a4fdbc20abefa93f5436d65617847 365 PANTHER PTHR32332:SF12 16 96 2.0E-102 T 23-04-2016 RBRH_RS06735 629a4fdbc20abefa93f5436d65617847 365 Gene3D G3DSA:3.20.20.70 20 351 2.0E-57 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RBRH_RS11710 756a0c2f991a3aca333bcbdbcbb29774 99 SUPERFAMILY SSF81273 61 98 2.35E-9 T 23-04-2016 RBRH_RS11710 756a0c2f991a3aca333bcbdbcbb29774 99 Pfam PF00816 H-NS histone family 6 89 7.5E-27 T 23-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 RBRH_RS11710 756a0c2f991a3aca333bcbdbcbb29774 99 Gene3D G3DSA:4.10.430.10 64 97 1.6E-6 T 23-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RBRH_RS11710 756a0c2f991a3aca333bcbdbcbb29774 99 SMART SM00528 58 97 9.4E-8 T 23-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RBRH_RS08725 82a587a8fa58de9f12ba4c5aabe5ab0b 127 Gene3D G3DSA:1.10.357.10 6 77 8.0E-4 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RBRH_RS08725 82a587a8fa58de9f12ba4c5aabe5ab0b 127 SUPERFAMILY SSF48498 11 77 5.27E-5 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RBRH_RS12100 b25124c2a3ab4373da08f7e5e0b0fe7f 285 Gene3D G3DSA:3.30.2010.10 56 146 8.5E-35 T 23-04-2016 RBRH_RS12100 b25124c2a3ab4373da08f7e5e0b0fe7f 285 PANTHER PTHR10120:SF19 1 280 1.9E-102 T 23-04-2016 RBRH_RS12100 b25124c2a3ab4373da08f7e5e0b0fe7f 285 Pfam PF01435 Peptidase family M48 67 278 2.1E-37 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RBRH_RS12100 b25124c2a3ab4373da08f7e5e0b0fe7f 285 Hamap MF_00188 Protease HtpX [htpX]. 4 278 28.907 T 23-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 RBRH_RS12100 b25124c2a3ab4373da08f7e5e0b0fe7f 285 PANTHER PTHR10120 1 280 1.9E-102 T 23-04-2016 RBRH_RS10985 1c8f6cece078159baaffd3605e241f2d 667 Pfam PF00999 Sodium/hydrogen exchanger family 9 379 1.6E-71 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RBRH_RS10985 1c8f6cece078159baaffd3605e241f2d 667 PANTHER PTHR16254 8 567 1.8E-159 T 23-04-2016 RBRH_RS10985 1c8f6cece078159baaffd3605e241f2d 667 Pfam PF02254 TrkA-N domain 413 526 7.6E-21 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RBRH_RS10985 1c8f6cece078159baaffd3605e241f2d 667 Gene3D G3DSA:3.30.70.1450 584 655 1.0E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RBRH_RS10985 1c8f6cece078159baaffd3605e241f2d 667 Gene3D G3DSA:3.40.50.720 407 541 6.0E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS10985 1c8f6cece078159baaffd3605e241f2d 667 PANTHER PTHR16254:SF6 8 567 1.8E-159 T 23-04-2016 RBRH_RS10985 1c8f6cece078159baaffd3605e241f2d 667 Pfam PF02080 TrkA-C domain 588 655 1.0E-9 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RBRH_RS10985 1c8f6cece078159baaffd3605e241f2d 667 SUPERFAMILY SSF51735 409 552 1.01E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain RBRH_RS10985 1c8f6cece078159baaffd3605e241f2d 667 SUPERFAMILY SSF116726 582 653 1.57E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RBRH_RS11190 ecc2c464c0f240f0e1f904c820af09f5 205 SUPERFAMILY SSF52833 57 200 3.03E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11190 ecc2c464c0f240f0e1f904c820af09f5 205 Gene3D G3DSA:3.40.30.10 53 200 7.0E-12 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS15820 873a6ffba2ec609ff9b6416aaf1eecc9 103 Pfam PF12802 MarR family 12 71 1.1E-14 T 23-04-2016 RBRH_RS15820 873a6ffba2ec609ff9b6416aaf1eecc9 103 SUPERFAMILY SSF46785 9 90 8.34E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS15820 873a6ffba2ec609ff9b6416aaf1eecc9 103 Gene3D G3DSA:1.10.10.10 10 91 9.2E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS15820 873a6ffba2ec609ff9b6416aaf1eecc9 103 PANTHER PTHR33164 9 90 7.0E-13 T 23-04-2016 RBRH_RS15820 873a6ffba2ec609ff9b6416aaf1eecc9 103 SMART SM00347 6 98 1.2E-4 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RBRH_RS00595 0e56bd7328fac1e7ce646e196e0e7bd4 376 Pfam PF05426 Alginate lyase 43 300 6.6E-45 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 RBRH_RS00595 0e56bd7328fac1e7ce646e196e0e7bd4 376 SUPERFAMILY SSF48230 90 343 2.65E-34 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase RBRH_RS00595 0e56bd7328fac1e7ce646e196e0e7bd4 376 Gene3D G3DSA:1.50.10.110 94 315 1.5E-27 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 RBRH_RS00515 d15b85948bc9b06d455bbb9f63fc9bd4 282 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 21 277 3.4E-37 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RBRH_RS00515 d15b85948bc9b06d455bbb9f63fc9bd4 282 Pfam PF00119 ATP synthase A chain 42 275 1.7E-51 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RBRH_RS00515 d15b85948bc9b06d455bbb9f63fc9bd4 282 ProSitePatterns PS00449 ATP synthase a subunit signature. 205 214 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site RBRH_RS00515 d15b85948bc9b06d455bbb9f63fc9bd4 282 PANTHER PTHR11410 24 117 1.7E-64 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RBRH_RS00515 d15b85948bc9b06d455bbb9f63fc9bd4 282 PANTHER PTHR11410 136 282 1.7E-64 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RBRH_RS00515 d15b85948bc9b06d455bbb9f63fc9bd4 282 Gene3D G3DSA:1.20.120.220 92 282 3.6E-45 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RBRH_RS00515 d15b85948bc9b06d455bbb9f63fc9bd4 282 Hamap MF_01393 ATP synthase subunit a [atpB]. 15 282 14.284 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RBRH_RS00515 d15b85948bc9b06d455bbb9f63fc9bd4 282 SUPERFAMILY SSF81336 91 275 1.09E-36 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RBRH_RS00515 d15b85948bc9b06d455bbb9f63fc9bd4 282 PANTHER PTHR11410:SF7 24 117 1.7E-64 T 23-04-2016 RBRH_RS00515 d15b85948bc9b06d455bbb9f63fc9bd4 282 PANTHER PTHR11410:SF7 136 282 1.7E-64 T 23-04-2016 RBRH_RS07045 333c30a223a6d2e6571688b387ab8ee7 161 SUPERFAMILY SSF51316 36 160 3.56E-60 T 23-04-2016 IPR011057 Mss4-like RBRH_RS07045 333c30a223a6d2e6571688b387ab8ee7 161 PANTHER PTHR10173 35 160 5.1E-64 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RBRH_RS07045 333c30a223a6d2e6571688b387ab8ee7 161 PANTHER PTHR10173:SF18 35 160 5.1E-64 T 23-04-2016 RBRH_RS07045 333c30a223a6d2e6571688b387ab8ee7 161 Pfam PF01641 SelR domain 41 160 4.7E-55 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RBRH_RS07045 333c30a223a6d2e6571688b387ab8ee7 161 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 37 160 1.7E-60 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RBRH_RS07045 333c30a223a6d2e6571688b387ab8ee7 161 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 38 161 38.948 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RBRH_RS07045 333c30a223a6d2e6571688b387ab8ee7 161 Gene3D G3DSA:2.170.150.20 32 160 8.6E-65 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RBRH_RS12045 cbabd6f418d927c2e9a33bd615015f4b 420 PANTHER PTHR12526 72 398 4.5E-45 T 23-04-2016 RBRH_RS12045 cbabd6f418d927c2e9a33bd615015f4b 420 PANTHER PTHR12526 17 55 4.5E-45 T 23-04-2016 RBRH_RS12045 cbabd6f418d927c2e9a33bd615015f4b 420 Pfam PF00534 Glycosyl transferases group 1 227 379 1.1E-35 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RBRH_RS12045 cbabd6f418d927c2e9a33bd615015f4b 420 SUPERFAMILY SSF53756 17 398 2.51E-64 T 23-04-2016 RBRH_RS12045 cbabd6f418d927c2e9a33bd615015f4b 420 Gene3D G3DSA:3.40.50.2000 224 380 5.4E-26 T 23-04-2016 RBRH_RS03295 ae7ebe84277b3b092781aab86fd5c772 258 Pfam PF02620 Uncharacterized ACR, COG1399 124 248 2.2E-21 T 23-04-2016 IPR003772 Protein of unknown function DUF177 RBRH_RS01515 8958cd8bf32e9bc277b6af9ab3e1d4dd 156 SUPERFAMILY SSF51230 81 155 1.01E-25 T 23-04-2016 IPR011053 Single hybrid motif RBRH_RS01515 8958cd8bf32e9bc277b6af9ab3e1d4dd 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 1.6E-59 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RBRH_RS01515 8958cd8bf32e9bc277b6af9ab3e1d4dd 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 1.14E-20 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RBRH_RS01515 8958cd8bf32e9bc277b6af9ab3e1d4dd 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 1.14E-20 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RBRH_RS01515 8958cd8bf32e9bc277b6af9ab3e1d4dd 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 1.14E-20 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RBRH_RS01515 8958cd8bf32e9bc277b6af9ab3e1d4dd 156 Pfam PF00364 Biotin-requiring enzyme 82 155 1.0E-25 T 23-04-2016 IPR000089 Biotin/lipoyl attachment RBRH_RS01515 8958cd8bf32e9bc277b6af9ab3e1d4dd 156 PANTHER PTHR23151 1 155 2.1E-44 T 23-04-2016 RBRH_RS01515 8958cd8bf32e9bc277b6af9ab3e1d4dd 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 23-04-2016 IPR001882 Biotin-binding site RBRH_RS01515 8958cd8bf32e9bc277b6af9ab3e1d4dd 156 Gene3D G3DSA:2.40.50.100 79 155 3.0E-33 T 23-04-2016 RBRH_RS02840 d7109a812078eb8600e366069c774ef5 345 PANTHER PTHR11409 13 337 7.6E-154 T 23-04-2016 RBRH_RS02840 d7109a812078eb8600e366069c774ef5 345 PANTHER PTHR11409:SF41 13 337 7.6E-154 T 23-04-2016 RBRH_RS02840 d7109a812078eb8600e366069c774ef5 345 Hamap MF_01962 Adenine deaminase. 8 323 82.09 T 23-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 RBRH_RS02840 d7109a812078eb8600e366069c774ef5 345 Gene3D G3DSA:3.20.20.140 9 338 1.1E-98 T 23-04-2016 RBRH_RS02840 d7109a812078eb8600e366069c774ef5 345 Pfam PF00962 Adenosine/AMP deaminase 12 331 1.5E-71 T 23-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 RBRH_RS02840 d7109a812078eb8600e366069c774ef5 345 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 13 333 1.9E-110 T 23-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 RBRH_RS02840 d7109a812078eb8600e366069c774ef5 345 SUPERFAMILY SSF51556 9 332 1.87E-83 T 23-04-2016 IPR032466 Metal-dependent hydrolase RBRH_RS10700 a8f85802422837026a5a8d72e7a614d6 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.482 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid RBRH_RS10700 a8f85802422837026a5a8d72e7a614d6 130 PANTHER PTHR21569 7 130 1.8E-64 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RBRH_RS10700 a8f85802422837026a5a8d72e7a614d6 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 8.2E-46 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RBRH_RS10700 a8f85802422837026a5a8d72e7a614d6 130 SUPERFAMILY SSF54211 5 130 3.64E-45 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RBRH_RS10700 a8f85802422837026a5a8d72e7a614d6 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RBRH_RS10700 a8f85802422837026a5a8d72e7a614d6 130 Gene3D G3DSA:3.30.230.10 6 130 3.3E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RBRH_RS03760 c4aea08020e845fda7869be19598d787 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 298 5.1E-31 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RBRH_RS03760 c4aea08020e845fda7869be19598d787 315 PANTHER PTHR11795 286 308 2.5E-54 T 23-04-2016 RBRH_RS03760 c4aea08020e845fda7869be19598d787 315 PANTHER PTHR11795 1 261 2.5E-54 T 23-04-2016 RBRH_RS08520 39e7a04a504cf860c976a6edeac8a120 159 Pfam PF11780 Protein of unknown function (DUF3318) 23 153 5.7E-16 T 23-04-2016 IPR021751 Protein of unknown function DUF3318 RBRH_RS00300 0b726e9574757663ef66506ccbe98efb 538 SUPERFAMILY SSF55931 17 525 2.81E-183 T 23-04-2016 RBRH_RS00300 0b726e9574757663ef66506ccbe98efb 538 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 538 206.588 T 23-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 RBRH_RS00300 0b726e9574757663ef66506ccbe98efb 538 PANTHER PTHR38761 11 536 1.3E-214 T 23-04-2016 RBRH_RS00300 0b726e9574757663ef66506ccbe98efb 538 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 16 527 6.9E-185 T 23-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 RBRH_RS00300 0b726e9574757663ef66506ccbe98efb 538 Pfam PF04262 Glutamate-cysteine ligase 18 391 2.0E-160 T 23-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 RBRH_RS07040 6dae7c647611da0f5b42b8268f2023c8 516 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 20 502 43.929 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 RBRH_RS07040 6dae7c647611da0f5b42b8268f2023c8 516 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 25 486 3.6E-136 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 RBRH_RS07040 6dae7c647611da0f5b42b8268f2023c8 516 PANTHER PTHR32057 43 516 2.5E-200 T 23-04-2016 RBRH_RS02620 b1a72d12143e2a10f33603d89b20d73e 176 SUPERFAMILY SSF50324 3 174 1.44E-66 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RBRH_RS02620 b1a72d12143e2a10f33603d89b20d73e 176 PANTHER PTHR10286 6 175 3.3E-68 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RBRH_RS02620 b1a72d12143e2a10f33603d89b20d73e 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RBRH_RS02620 b1a72d12143e2a10f33603d89b20d73e 176 Pfam PF00719 Inorganic pyrophosphatase 18 172 7.2E-51 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RBRH_RS02620 b1a72d12143e2a10f33603d89b20d73e 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 34.861 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RBRH_RS02620 b1a72d12143e2a10f33603d89b20d73e 176 Gene3D G3DSA:3.90.80.10 3 175 2.6E-59 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RBRH_RS04560 b5abe489ea127ae422273692645aa61c 758 PANTHER PTHR31566 15 199 3.5E-44 T 23-04-2016 RBRH_RS04560 b5abe489ea127ae422273692645aa61c 758 PANTHER PTHR31566 591 731 3.5E-44 T 23-04-2016 RBRH_RS04560 b5abe489ea127ae422273692645aa61c 758 PANTHER PTHR31566 234 446 3.5E-44 T 23-04-2016 RBRH_RS04560 b5abe489ea127ae422273692645aa61c 758 Pfam PF05140 ResB-like family 27 701 1.1E-159 T 23-04-2016 IPR007816 ResB-like domain RBRH_RS01740 f3d691431b8182e548f2247a2be40471 214 PANTHER PTHR30462 5 212 4.6E-20 T 23-04-2016 RBRH_RS01740 f3d691431b8182e548f2247a2be40471 214 Pfam PF04403 Paraquat-inducible protein A 44 196 1.5E-43 T 23-04-2016 IPR007498 Paraquat-inducible protein A RBRH_RS01740 f3d691431b8182e548f2247a2be40471 214 PANTHER PTHR30462:SF3 5 212 4.6E-20 T 23-04-2016 RBRH_RS09695 c3cfdc64fdc9f5442eda150f851a0a9b 427 SUPERFAMILY SSF53383 2 423 8.93E-127 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS09695 c3cfdc64fdc9f5442eda150f851a0a9b 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 423 5.1E-184 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RBRH_RS09695 c3cfdc64fdc9f5442eda150f851a0a9b 427 Pfam PF00202 Aminotransferase class-III 32 394 9.5E-74 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS09695 c3cfdc64fdc9f5442eda150f851a0a9b 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS09695 c3cfdc64fdc9f5442eda150f851a0a9b 427 PANTHER PTHR11986:SF5 1 427 6.1E-209 T 23-04-2016 RBRH_RS09695 c3cfdc64fdc9f5442eda150f851a0a9b 427 PANTHER PTHR11986 1 427 6.1E-209 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RBRH_RS09695 c3cfdc64fdc9f5442eda150f851a0a9b 427 Gene3D G3DSA:3.90.1150.10 2 69 2.9E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS09695 c3cfdc64fdc9f5442eda150f851a0a9b 427 Gene3D G3DSA:3.90.1150.10 319 423 2.9E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS09695 c3cfdc64fdc9f5442eda150f851a0a9b 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 425 101.161 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RBRH_RS09695 c3cfdc64fdc9f5442eda150f851a0a9b 427 Gene3D G3DSA:3.40.640.10 70 316 3.1E-78 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS08800 734fbf1145ef4854418e36a29b23b699 217 PANTHER PTHR11670 1 209 5.3E-101 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08800 734fbf1145ef4854418e36a29b23b699 217 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 211 44.135 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08800 734fbf1145ef4854418e36a29b23b699 217 SUPERFAMILY SSF52016 1 201 1.61E-61 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RBRH_RS08800 734fbf1145ef4854418e36a29b23b699 217 PANTHER PTHR11670:SF27 1 209 5.3E-101 T 23-04-2016 RBRH_RS08800 734fbf1145ef4854418e36a29b23b699 217 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 197 3.0E-82 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS08800 734fbf1145ef4854418e36a29b23b699 217 Gene3D G3DSA:3.20.19.10 1 205 8.9E-51 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RBRH_RS08800 734fbf1145ef4854418e36a29b23b699 217 Pfam PF00694 Aconitase C-terminal domain 1 130 2.5E-37 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RBRH_RS09265 334306be57659b050b6818853f0ba887 489 SMART SM00316 37 120 4.1E-6 T 23-04-2016 IPR022967 RNA-binding domain, S1 RBRH_RS09265 334306be57659b050b6818853f0ba887 489 SUPERFAMILY SSF50249 39 126 1.81E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS09265 334306be57659b050b6818853f0ba887 489 PANTHER PTHR30001 1 489 6.6E-191 T 23-04-2016 RBRH_RS09265 334306be57659b050b6818853f0ba887 489 Gene3D G3DSA:2.40.50.140 31 126 4.5E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS09265 334306be57659b050b6818853f0ba887 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.6E-155 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RBRH_RS09265 334306be57659b050b6818853f0ba887 489 Pfam PF10150 Ribonuclease E/G family 122 393 7.7E-102 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RBRH_RS02705 0bd3791c717236bda8f2785adff6b597 171 Gene3D G3DSA:1.10.3080.10 7 92 2.1E-6 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RBRH_RS02705 0bd3791c717236bda8f2785adff6b597 171 SUPERFAMILY SSF81340 7 92 8.11E-10 T 23-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RBRH_RS06915 859dfc9f4076a8cbfc71cbbdbb79e8d7 513 PANTHER PTHR30029 8 513 3.0E-212 T 23-04-2016 RBRH_RS06915 859dfc9f4076a8cbfc71cbbdbb79e8d7 513 PANTHER PTHR30029:SF2 8 513 3.0E-212 T 23-04-2016 RBRH_RS06915 859dfc9f4076a8cbfc71cbbdbb79e8d7 513 Pfam PF04293 SpoVR like protein 18 451 3.5E-174 T 23-04-2016 IPR007390 Sporulation stage V, protein R RBRH_RS11340 fc2d51bb22c62c530302a8723e0ce6b5 171 Pfam PF08534 Redoxin 36 162 2.2E-23 T 23-04-2016 IPR013740 Redoxin GO:0016491 RBRH_RS11340 fc2d51bb22c62c530302a8723e0ce6b5 171 Gene3D G3DSA:3.40.30.10 12 170 2.3E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11340 fc2d51bb22c62c530302a8723e0ce6b5 171 PANTHER PTHR10681 45 167 2.8E-24 T 23-04-2016 RBRH_RS11340 fc2d51bb22c62c530302a8723e0ce6b5 171 SUPERFAMILY SSF52833 34 170 1.18E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold RBRH_RS11340 fc2d51bb22c62c530302a8723e0ce6b5 171 PANTHER PTHR10681:SF107 45 167 2.8E-24 T 23-04-2016 RBRH_RS12195 a4498a2ee755b43ba423641005952daa 111 Pfam PF13663 Domain of unknown function (DUF4148) 1 60 3.3E-15 T 23-04-2016 IPR025421 Protein of unknown function DUF4148 RBRH_RS00675 db5707783c290eba532c59b4ce7d452d 84 Pfam PF04606 Ogr/Delta-like zinc finger 6 52 2.5E-18 T 23-04-2016 IPR007684 Zinc finger, Ogr/Delta-type RBRH_RS02665 ff30e9903262bd4980f5e4c533e2bde5 234 Gene3D G3DSA:2.50.20.10 42 233 1.0E-63 T 23-04-2016 RBRH_RS02665 ff30e9903262bd4980f5e4c533e2bde5 234 PANTHER PTHR35869 10 233 3.2E-31 T 23-04-2016 RBRH_RS02665 ff30e9903262bd4980f5e4c533e2bde5 234 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 25 234 27.87 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RBRH_RS02665 ff30e9903262bd4980f5e4c533e2bde5 234 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 62 224 6.2E-38 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RBRH_RS02665 ff30e9903262bd4980f5e4c533e2bde5 234 SUPERFAMILY SSF89392 42 233 3.65E-43 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RBRH_RS08740 2b91a907d381716e9967b3bea6dc9d34 144 Pfam PF02674 Colicin V production protein 1 125 2.2E-24 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 RBRH_RS08740 2b91a907d381716e9967b3bea6dc9d34 144 PANTHER PTHR36926 1 136 2.1E-17 T 23-04-2016 RBRH_RS08740 2b91a907d381716e9967b3bea6dc9d34 144 PANTHER PTHR36926:SF1 1 136 2.1E-17 T 23-04-2016 RBRH_RS10490 6429bb3d151be158e09771a9dda8fb46 128 Pfam PF01850 PIN domain 3 121 1.6E-9 T 23-04-2016 IPR002716 PIN domain RBRH_RS10490 6429bb3d151be158e09771a9dda8fb46 128 SUPERFAMILY SSF88723 1 120 1.65E-16 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS10490 6429bb3d151be158e09771a9dda8fb46 128 PANTHER PTHR36173 2 127 1.2E-31 T 23-04-2016 RBRH_RS10490 6429bb3d151be158e09771a9dda8fb46 128 PANTHER PTHR36173:SF2 2 127 1.2E-31 T 23-04-2016 RBRH_RS00975 a9adb4525b1084e74b73a8212554ea6e 396 PANTHER PTHR12049 25 376 8.2E-53 T 23-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RBRH_RS00975 a9adb4525b1084e74b73a8212554ea6e 396 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 103 324 2.0E-48 T 23-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RBRH_RS00975 a9adb4525b1084e74b73a8212554ea6e 396 SUPERFAMILY SSF53335 27 384 4.13E-91 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS08545 a3a51f0f3ba9e4f727235636ba1424dd 164 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 145 2.6E-59 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RBRH_RS08545 a3a51f0f3ba9e4f727235636ba1424dd 164 PANTHER PTHR30455 2 156 2.9E-67 T 23-04-2016 RBRH_RS08545 a3a51f0f3ba9e4f727235636ba1424dd 164 Pfam PF03477 ATP cone domain 50 136 3.4E-16 T 23-04-2016 IPR005144 ATP-cone domain RBRH_RS08545 a3a51f0f3ba9e4f727235636ba1424dd 164 PANTHER PTHR30455:SF2 2 156 2.9E-67 T 23-04-2016 RBRH_RS08545 a3a51f0f3ba9e4f727235636ba1424dd 164 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 86.682 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RBRH_RS00100 d0d5d653dfe3c0017b5d141d82fe6fac 586 SUPERFAMILY SSF69255 379 463 1.94E-12 T 23-04-2016 RBRH_RS00100 d0d5d653dfe3c0017b5d141d82fe6fac 586 Gene3D G3DSA:2.40.50.230 387 463 1.1E-9 T 23-04-2016 IPR006531 Gp5 N-terminal RBRH_RS00100 d0d5d653dfe3c0017b5d141d82fe6fac 586 SUPERFAMILY SSF69279 23 181 3.91E-5 T 23-04-2016 RBRH_RS08540 2f60a7cb3352bf88a4e625ee0742660c 201 SUPERFAMILY SSF54523 34 133 1.1E-8 T 23-04-2016 RBRH_RS08540 2f60a7cb3352bf88a4e625ee0742660c 201 Pfam PF12019 Type II transport protein GspH 67 190 1.3E-18 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RBRH_RS00910 5964dc7d5fe29cb689b821affbc1a1c1 266 PANTHER PTHR30143 1 265 3.8E-92 T 23-04-2016 RBRH_RS00910 5964dc7d5fe29cb689b821affbc1a1c1 266 Gene3D G3DSA:3.90.850.10 2 265 3.4E-83 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS00910 5964dc7d5fe29cb689b821affbc1a1c1 266 SUPERFAMILY SSF56529 1 265 2.29E-76 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS00910 5964dc7d5fe29cb689b821affbc1a1c1 266 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 2 265 2.8E-134 T 23-04-2016 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 UniPathway: UPA00208 RBRH_RS00910 5964dc7d5fe29cb689b821affbc1a1c1 266 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 74 261 1.0E-6 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RBRH_RS06280 3f13142b602151f12409d0d270abc6ef 239 Pfam PF11180 Protein of unknown function (DUF2968) 56 230 4.3E-75 T 23-04-2016 IPR021350 Protein of unknown function DUF2968 RBRH_RS04870 ed466c383eef67cea192b67fc842ebca 75 Gene3D G3DSA:2.10.260.10 1 50 6.7E-4 T 23-04-2016 RBRH_RS04870 ed466c383eef67cea192b67fc842ebca 75 SUPERFAMILY SSF89447 3 66 5.23E-9 T 23-04-2016 RBRH_RS00800 a20e4d62fce2d3163022df192e1c62de 146 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 8 139 3.8E-30 T 23-04-2016 IPR020000 Bacteriophage P2, LysB RBRH_RS03345 73ec4ca0141e13adbb3f962c7c9ecd9f 224 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 18 107 1.3E-10 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RBRH_RS03345 73ec4ca0141e13adbb3f962c7c9ecd9f 224 SUPERFAMILY SSF89069 18 96 1.57E-9 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RBRH_RS06890 0fe8a917c852eda0efa940cdd10c7035 384 Pfam PF01548 Transposase 44 179 2.4E-9 T 23-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RBRH_RS06890 0fe8a917c852eda0efa940cdd10c7035 384 PANTHER PTHR33055:SF3 76 373 1.2E-24 T 23-04-2016 RBRH_RS06890 0fe8a917c852eda0efa940cdd10c7035 384 PANTHER PTHR33055 76 373 1.2E-24 T 23-04-2016 RBRH_RS06890 0fe8a917c852eda0efa940cdd10c7035 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 253 331 1.8E-17 T 23-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RBRH_RS09300 65470bf91bcfe92587e82291b948dd64 182 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 40 113 8.9E-10 T 23-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin RBRH_RS03965 7512298a365f73e4d021ac27c4686558 497 Pfam PF11863 Protein of unknown function (DUF3383) 7 494 1.6E-125 T 23-04-2016 IPR021808 Protein of unknown function DUF3383 RBRH_RS09160 7c3792bc0c7ab8a4b72f3cc908bc0c78 141 Pfam PF12279 Protein of unknown function (DUF3619) 9 138 3.9E-44 T 23-04-2016 IPR022064 Protein of unknown function DUF3619 RBRH_RS01585 a80d0104235e3e8166a2a337fb2ff408 182 Gene3D G3DSA:3.30.370.10 83 175 2.2E-31 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) RBRH_RS01585 a80d0104235e3e8166a2a337fb2ff408 182 Pfam PF01337 Barstar (barnase inhibitor) 87 171 1.6E-26 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) RBRH_RS01585 a80d0104235e3e8166a2a337fb2ff408 182 SUPERFAMILY SSF52038 83 175 3.79E-23 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) RBRH_RS03105 762e02a5cf3af54a88045e5656b7966f 107 Pfam PF09413 Putative prokaryotic signal transducing protein 1 65 1.2E-6 T 23-04-2016 IPR018551 Domain of unknown function DUF2007 RBRH_RS01750 386f731ceb1dbea6582a8483f63bbffb 557 Pfam PF02470 MlaD protein 315 418 1.8E-15 T 23-04-2016 IPR003399 Mce/MlaD RBRH_RS01750 386f731ceb1dbea6582a8483f63bbffb 557 Pfam PF02470 MlaD protein 71 162 2.2E-12 T 23-04-2016 IPR003399 Mce/MlaD RBRH_RS01750 386f731ceb1dbea6582a8483f63bbffb 557 Pfam PF02470 MlaD protein 188 246 5.4E-7 T 23-04-2016 IPR003399 Mce/MlaD RBRH_RS01750 386f731ceb1dbea6582a8483f63bbffb 557 PANTHER PTHR30462:SF0 23 347 5.0E-84 T 23-04-2016 RBRH_RS01750 386f731ceb1dbea6582a8483f63bbffb 557 PANTHER PTHR30462 23 347 5.0E-84 T 23-04-2016 RBRH_RS07740 a9bdaba92bfc45fb0b58ef65e992a6e3 323 Gene3D G3DSA:3.30.930.10 161 297 5.6E-4 T 23-04-2016 RBRH_RS07740 a9bdaba92bfc45fb0b58ef65e992a6e3 323 SUPERFAMILY SSF55681 128 317 5.8E-23 T 23-04-2016 RBRH_RS07740 a9bdaba92bfc45fb0b58ef65e992a6e3 323 SUPERFAMILY SSF55681 22 100 5.8E-23 T 23-04-2016 RBRH_RS08625 0fc2c475d107e970cdcc6eb0b235ce4d 95 Pfam PF02426 Muconolactone delta-isomerase 12 75 3.1E-7 T 23-04-2016 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RBRH_RS08625 0fc2c475d107e970cdcc6eb0b235ce4d 95 SUPERFAMILY SSF54909 11 79 2.15E-7 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel RBRH_RS02215 6d168e7aef66e789af7060665dd97291 148 Pfam PF11162 Protein of unknown function (DUF2946) 37 145 3.5E-15 T 23-04-2016 IPR021333 Protein of unknown function DUF2946 RBRH_RS15695 6784527cf353f9e7fd1304c7de9e0742 249 Gene3D G3DSA:3.40.50.300 28 189 1.3E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS15695 6784527cf353f9e7fd1304c7de9e0742 249 Pfam PF13245 Part of AAA domain 28 80 3.5E-6 T 23-04-2016 RBRH_RS15695 6784527cf353f9e7fd1304c7de9e0742 249 SUPERFAMILY SSF52540 28 248 2.44E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS07805 ef8132cb8af915c0303591546bf88377 144 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 1.9E-19 T 23-04-2016 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain RBRH_RS07805 ef8132cb8af915c0303591546bf88377 144 PANTHER PTHR39158 1 69 1.2E-13 T 23-04-2016 RBRH_RS04995 5918af69653e9ef5e6587554ce1c2d2f 99 Gene3D G3DSA:3.40.50.1000 43 85 1.7E-6 T 23-04-2016 IPR023214 HAD-like domain RBRH_RS10410 362aaf914631a23d9300cb99307010e1 241 PANTHER PTHR21327:SF15 24 223 1.8E-110 T 23-04-2016 RBRH_RS10410 362aaf914631a23d9300cb99307010e1 241 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 20 222 40.948 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS10410 362aaf914631a23d9300cb99307010e1 241 SUPERFAMILY SSF55821 21 220 5.95E-80 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RBRH_RS10410 362aaf914631a23d9300cb99307010e1 241 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 24 218 2.4E-70 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS10410 362aaf914631a23d9300cb99307010e1 241 PANTHER PTHR21327 24 223 1.8E-110 T 23-04-2016 RBRH_RS10410 362aaf914631a23d9300cb99307010e1 241 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 27 216 3.0E-79 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RBRH_RS10410 362aaf914631a23d9300cb99307010e1 241 Gene3D G3DSA:3.90.870.10 23 222 6.5E-89 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RBRH_RS06815 2baf475f6a86f6e800d14df3aedcb2af 300 SUPERFAMILY SSF46785 3 112 3.87E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06815 2baf475f6a86f6e800d14df3aedcb2af 300 PANTHER PTHR30537 1 289 9.3E-145 T 23-04-2016 RBRH_RS06815 2baf475f6a86f6e800d14df3aedcb2af 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.1E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RBRH_RS06815 2baf475f6a86f6e800d14df3aedcb2af 300 Gene3D G3DSA:3.40.190.10 171 259 5.1E-20 T 23-04-2016 RBRH_RS06815 2baf475f6a86f6e800d14df3aedcb2af 300 Gene3D G3DSA:1.10.10.10 3 88 2.8E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS06815 2baf475f6a86f6e800d14df3aedcb2af 300 SUPERFAMILY SSF53850 91 296 1.61E-38 T 23-04-2016 RBRH_RS06815 2baf475f6a86f6e800d14df3aedcb2af 300 PANTHER PTHR30537:SF20 1 289 9.3E-145 T 23-04-2016 RBRH_RS06815 2baf475f6a86f6e800d14df3aedcb2af 300 Gene3D G3DSA:3.40.190.10 92 170 1.4E-7 T 23-04-2016 RBRH_RS06815 2baf475f6a86f6e800d14df3aedcb2af 300 Pfam PF03466 LysR substrate binding domain 89 293 3.0E-36 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS01745 42cbb840af7d4c6db913148178bf8f5b 216 PANTHER PTHR30462:SF1 33 210 9.4E-52 T 23-04-2016 RBRH_RS01745 42cbb840af7d4c6db913148178bf8f5b 216 Pfam PF04403 Paraquat-inducible protein A 53 208 2.7E-56 T 23-04-2016 IPR007498 Paraquat-inducible protein A RBRH_RS01745 42cbb840af7d4c6db913148178bf8f5b 216 PANTHER PTHR30462 33 210 9.4E-52 T 23-04-2016 RBRH_RS10960 b45554550c40819360aa429827b239c8 376 Pfam PF01594 Domain of unknown function DUF20 56 368 2.0E-15 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like RBRH_RS04265 76dbbc5d34c624cd5f4cf724f889c644 74 Gene3D G3DSA:3.40.630.10 1 64 3.4E-9 T 23-04-2016 RBRH_RS04265 76dbbc5d34c624cd5f4cf724f889c644 74 SUPERFAMILY SSF53187 1 62 3.14E-5 T 23-04-2016 RBRH_RS02615 b03c0d8519d29ccdae8839ab88e4dc60 397 SUPERFAMILY SSF48452 260 389 1.08E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS02615 b03c0d8519d29ccdae8839ab88e4dc60 397 Pfam PF07219 HemY protein N-terminus 28 133 9.4E-26 T 23-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 RBRH_RS02615 b03c0d8519d29ccdae8839ab88e4dc60 397 Gene3D G3DSA:1.25.40.10 100 133 3.4E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS02615 b03c0d8519d29ccdae8839ab88e4dc60 397 Gene3D G3DSA:1.25.40.10 332 391 3.4E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS02615 b03c0d8519d29ccdae8839ab88e4dc60 397 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 390 8.1E-124 T 23-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 RBRH_RS11375 84e7703ae7344f1c66b08952ccb79207 214 PANTHER PTHR12277 8 208 9.0E-30 T 23-04-2016 RBRH_RS11375 84e7703ae7344f1c66b08952ccb79207 214 PANTHER PTHR12277:SF79 8 208 9.0E-30 T 23-04-2016 RBRH_RS11375 84e7703ae7344f1c66b08952ccb79207 214 Pfam PF12146 Serine aminopeptidase, S33 56 157 1.5E-6 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 RBRH_RS11375 84e7703ae7344f1c66b08952ccb79207 214 SUPERFAMILY SSF53474 3 210 3.68E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS11375 84e7703ae7344f1c66b08952ccb79207 214 Gene3D G3DSA:3.40.50.1820 6 211 5.7E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08915 b5a16f14d5a866f8c5ff65d8335df281 199 Pfam PF13470 PIN domain 18 155 2.2E-33 T 23-04-2016 IPR002716 PIN domain RBRH_RS08915 b5a16f14d5a866f8c5ff65d8335df281 199 PANTHER PTHR34610 16 93 2.3E-19 T 23-04-2016 RBRH_RS08915 b5a16f14d5a866f8c5ff65d8335df281 199 PANTHER PTHR34610 122 186 2.3E-19 T 23-04-2016 RBRH_RS08915 b5a16f14d5a866f8c5ff65d8335df281 199 PANTHER PTHR34610:SF3 16 93 2.3E-19 T 23-04-2016 RBRH_RS08915 b5a16f14d5a866f8c5ff65d8335df281 199 PANTHER PTHR34610:SF3 122 186 2.3E-19 T 23-04-2016 RBRH_RS08915 b5a16f14d5a866f8c5ff65d8335df281 199 SUPERFAMILY SSF88723 18 89 1.03E-9 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS08915 b5a16f14d5a866f8c5ff65d8335df281 199 SUPERFAMILY SSF88723 127 162 1.03E-9 T 23-04-2016 IPR029060 PIN domain-like RBRH_RS07550 be28ad13acb7a2ebf6de8106afcfd05c 398 SUPERFAMILY SSF48452 31 123 3.59E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS07550 be28ad13acb7a2ebf6de8106afcfd05c 398 Pfam PF13432 Tetratricopeptide repeat 31 87 1.5E-8 T 23-04-2016 RBRH_RS07550 be28ad13acb7a2ebf6de8106afcfd05c 398 Gene3D G3DSA:1.25.40.10 33 91 5.7E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RBRH_RS04905 5a99be854144057b01d4f2e66c25bf7b 289 Gene3D G3DSA:3.40.50.150 61 176 1.3E-4 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS04905 5a99be854144057b01d4f2e66c25bf7b 289 Pfam PF13679 Methyltransferase domain 34 174 2.4E-42 T 23-04-2016 IPR025714 Methyltransferase domain RBRH_RS04905 5a99be854144057b01d4f2e66c25bf7b 289 PANTHER PTHR13369 24 250 5.5E-21 T 23-04-2016 RBRH_RS04905 5a99be854144057b01d4f2e66c25bf7b 289 SUPERFAMILY SSF53335 39 172 1.14E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS08265 b328fdfbafb7c96f3418eff76651ae2d 242 PANTHER PTHR35603 136 221 1.5E-12 T 23-04-2016 RBRH_RS08265 b328fdfbafb7c96f3418eff76651ae2d 242 Pfam PF05433 Glycine zipper 2TM domain 154 193 7.4E-8 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RBRH_RS10520 ca2edb027b7af4d7637d0fc34730c7ba 729 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 521 643 2.1E-23 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RBRH_RS10520 ca2edb027b7af4d7637d0fc34730c7ba 729 PANTHER PTHR23073:SF24 521 726 1.4E-35 T 23-04-2016 RBRH_RS10520 ca2edb027b7af4d7637d0fc34730c7ba 729 Gene3D G3DSA:3.40.50.300 473 659 7.4E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10520 ca2edb027b7af4d7637d0fc34730c7ba 729 PANTHER PTHR23073 521 726 1.4E-35 T 23-04-2016 RBRH_RS10520 ca2edb027b7af4d7637d0fc34730c7ba 729 SUPERFAMILY SSF52540 472 713 1.14E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS10520 ca2edb027b7af4d7637d0fc34730c7ba 729 SMART SM00382 516 650 1.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain RBRH_RS07410 f259eb6ad43c9a1d14ae9c7a10ba7594 209 PANTHER PTHR30086:SF3 2 209 2.0E-55 T 23-04-2016 RBRH_RS07410 f259eb6ad43c9a1d14ae9c7a10ba7594 209 PANTHER PTHR30086 2 209 2.0E-55 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RBRH_RS07410 f259eb6ad43c9a1d14ae9c7a10ba7594 209 Pfam PF01810 LysE type translocator 17 208 6.8E-34 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RBRH_RS07410 f259eb6ad43c9a1d14ae9c7a10ba7594 209 PIRSF PIRSF006324 1 209 3.3E-55 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RBRH_RS08815 c255757bfbd0efe460b3fdff657947d5 89 Gene3D G3DSA:1.10.150.250 6 84 6.7E-24 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase RBRH_RS08815 c255757bfbd0efe460b3fdff657947d5 89 SUPERFAMILY SSF109910 5 82 5.49E-20 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase RBRH_RS08815 c255757bfbd0efe460b3fdff657947d5 89 Pfam PF03937 Flavinator of succinate dehydrogenase 12 72 4.1E-21 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase RBRH_RS07025 496f3f968aa1c29c16f2666a79d22cbe 152 SUPERFAMILY SSF54637 5 121 2.99E-31 T 23-04-2016 IPR029069 HotDog domain RBRH_RS07025 496f3f968aa1c29c16f2666a79d22cbe 152 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 8 118 1.1E-20 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain RBRH_RS07025 496f3f968aa1c29c16f2666a79d22cbe 152 PANTHER PTHR12418 7 135 4.2E-24 T 23-04-2016 RBRH_RS07025 496f3f968aa1c29c16f2666a79d22cbe 152 Pfam PF03061 Thioesterase superfamily 40 111 1.6E-15 T 23-04-2016 IPR006683 Thioesterase domain RBRH_RS07025 496f3f968aa1c29c16f2666a79d22cbe 152 Gene3D G3DSA:3.10.129.10 5 122 4.3E-34 T 23-04-2016 IPR029069 HotDog domain RBRH_RS12070 dab97a9a8f10d620f4fbee15b2752727 279 Pfam PF05598 Transposase domain (DUF772) 52 126 2.7E-18 T 23-04-2016 IPR008490 Transposase InsH, N-terminal RBRH_RS12070 dab97a9a8f10d620f4fbee15b2752727 279 PANTHER PTHR33803 8 277 1.6E-104 T 23-04-2016 RBRH_RS12070 dab97a9a8f10d620f4fbee15b2752727 279 PANTHER PTHR33803:SF1 8 277 1.6E-104 T 23-04-2016 RBRH_RS09115 9ec61aa5edef535f6a7b3b984deb35a7 418 PANTHER PTHR30483 22 377 1.4E-35 T 23-04-2016 RBRH_RS09115 9ec61aa5edef535f6a7b3b984deb35a7 418 Gene3D G3DSA:3.40.50.2300 159 305 1.3E-23 T 23-04-2016 RBRH_RS09115 9ec61aa5edef535f6a7b3b984deb35a7 418 Gene3D G3DSA:3.40.50.2300 20 158 6.9E-26 T 23-04-2016 RBRH_RS09115 9ec61aa5edef535f6a7b3b984deb35a7 418 Gene3D G3DSA:3.40.50.2300 306 367 6.9E-26 T 23-04-2016 RBRH_RS09115 9ec61aa5edef535f6a7b3b984deb35a7 418 Pfam PF13458 Periplasmic binding protein 23 379 9.4E-66 T 23-04-2016 IPR028081 Leucine-binding protein domain RBRH_RS09115 9ec61aa5edef535f6a7b3b984deb35a7 418 SUPERFAMILY SSF53822 23 379 1.04E-62 T 23-04-2016 IPR028082 Periplasmic binding protein-like I RBRH_RS06170 d6d173ce3ad9c74ebabd7c6df2051162 133 PANTHER PTHR30007 5 91 6.1E-16 T 23-04-2016 RBRH_RS06170 d6d173ce3ad9c74ebabd7c6df2051162 133 PANTHER PTHR30007:SF0 5 91 6.1E-16 T 23-04-2016 RBRH_RS06170 d6d173ce3ad9c74ebabd7c6df2051162 133 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 82 5.6E-21 T 23-04-2016 IPR025161 Putative transposase IS4/IS5 family RBRH_RS10770 7b4fed1b456cf2551f8e58ecf5e8cf8d 108 SUPERFAMILY SSF141868 51 82 3.14E-5 T 23-04-2016 IPR001633 EAL domain RBRH_RS10770 7b4fed1b456cf2551f8e58ecf5e8cf8d 108 Gene3D G3DSA:3.20.20.450 51 82 1.1E-4 T 23-04-2016 IPR001633 EAL domain RBRH_RS14560 b2e5a661cc09a44ec72a7be17e86e070 153 Pfam PF01725 Ham1 family 88 153 2.2E-9 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RBRH_RS14560 b2e5a661cc09a44ec72a7be17e86e070 153 SUPERFAMILY SSF52972 85 153 1.99E-15 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RBRH_RS14560 b2e5a661cc09a44ec72a7be17e86e070 153 Gene3D G3DSA:3.90.950.10 86 153 3.1E-17 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RBRH_RS07750 a032babc345a9b4b57c66de19dc55c36 211 Gene3D G3DSA:3.40.630.30 1 148 2.3E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS07750 a032babc345a9b4b57c66de19dc55c36 211 SUPERFAMILY SSF55729 2 151 3.88E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS07750 a032babc345a9b4b57c66de19dc55c36 211 Pfam PF13673 Acetyltransferase (GNAT) domain 62 148 3.6E-7 T 23-04-2016 IPR000182 GNAT domain GO:0008080 RBRH_RS00315 d5907379b7aa708024067f9f11f85404 67 Pfam PF11381 Protein of unknown function (DUF3185) 4 61 3.2E-20 T 23-04-2016 IPR021521 Protein of unknown function DUF3185 RBRH_RS05435 2603bc81bd84d73e2f275f68f79ea6b1 145 Pfam PF09722 Protein of unknown function (DUF2384) 90 143 2.5E-10 T 23-04-2016 IPR024467 Domain of unknown function DUF2384 RBRH_RS05435 2603bc81bd84d73e2f275f68f79ea6b1 145 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 30 139 8.0E-49 T 23-04-2016 IPR020358 Uncharacterised protein family Y4oB RBRH_RS03125 995cf4f38aa7c686e4f8aacf1657f32a 209 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 76 89 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RBRH_RS03125 995cf4f38aa7c686e4f8aacf1657f32a 209 Pfam PF00994 Probable molybdopterin binding domain 15 157 3.4E-28 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS03125 995cf4f38aa7c686e4f8aacf1657f32a 209 PANTHER PTHR10192 5 206 2.4E-77 T 23-04-2016 RBRH_RS03125 995cf4f38aa7c686e4f8aacf1657f32a 209 SMART SM00852 14 164 1.6E-22 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS03125 995cf4f38aa7c686e4f8aacf1657f32a 209 Gene3D G3DSA:3.40.980.10 9 192 1.6E-50 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS03125 995cf4f38aa7c686e4f8aacf1657f32a 209 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 11 157 3.7E-36 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS03125 995cf4f38aa7c686e4f8aacf1657f32a 209 SUPERFAMILY SSF53218 10 198 1.22E-45 T 23-04-2016 IPR001453 MoaB/Mog domain RBRH_RS06715 a2dd19f72e892f1a66f167cd099edc2f 81 Gene3D G3DSA:1.10.10.10 26 66 8.6E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RBRH_RS13800 627e76bed9a99b9874bad7a5058ddcd2 111 Gene3D G3DSA:3.30.470.10 1 73 1.2E-5 T 23-04-2016 RBRH_RS13800 627e76bed9a99b9874bad7a5058ddcd2 111 SUPERFAMILY SSF56752 1 108 1.03E-10 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RBRH_RS03600 b21a70ad72688bb1945dc89544697ccb 156 Pfam PF13664 Domain of unknown function (DUF4149) 9 107 1.1E-18 T 23-04-2016 IPR025423 Domain of unknown function DUF4149 RBRH_RS10515 f0d2df3b8939207cfbf677fa6aa9b106 306 Pfam PF14065 Protein of unknown function (DUF4255) 24 193 2.5E-28 T 23-04-2016 IPR025351 Protein of unknown function DUF4255 RBRH_RS03835 431f3ad32efe96cf7c3dcaa41246bbe5 215 Pfam PF13479 AAA domain 3 177 2.9E-7 T 23-04-2016 RBRH_RS03815 6e7158a285092b15c93b081cad6c70ac 235 Gene3D G3DSA:1.10.443.10 33 222 1.3E-27 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS03815 6e7158a285092b15c93b081cad6c70ac 235 PANTHER PTHR30349:SF20 2 159 4.2E-14 T 23-04-2016 RBRH_RS03815 6e7158a285092b15c93b081cad6c70ac 235 PANTHER PTHR30349:SF20 177 222 4.2E-14 T 23-04-2016 RBRH_RS03815 6e7158a285092b15c93b081cad6c70ac 235 PANTHER PTHR30349 2 159 4.2E-14 T 23-04-2016 RBRH_RS03815 6e7158a285092b15c93b081cad6c70ac 235 PANTHER PTHR30349 177 222 4.2E-14 T 23-04-2016 RBRH_RS03815 6e7158a285092b15c93b081cad6c70ac 235 Pfam PF00589 Phage integrase family 34 220 4.6E-13 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS03815 6e7158a285092b15c93b081cad6c70ac 235 SUPERFAMILY SSF56349 2 223 5.3E-34 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RBRH_RS03225 48089a19db1ef4e85b76ec620c4ac0ee 498 PANTHER PTHR30563 19 483 7.5E-91 T 23-04-2016 RBRH_RS03225 48089a19db1ef4e85b76ec620c4ac0ee 498 Pfam PF02646 RmuC family 186 479 9.2E-80 T 23-04-2016 IPR003798 DNA recombination RmuC RBRH_RS06800 3535a88a9eb3faa57aa3d98fbd58c944 287 Gene3D G3DSA:3.40.50.1820 35 280 9.5E-50 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS06800 3535a88a9eb3faa57aa3d98fbd58c944 287 SUPERFAMILY SSF53474 15 285 6.33E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS06800 3535a88a9eb3faa57aa3d98fbd58c944 287 PANTHER PTHR23024 11 287 4.9E-41 T 23-04-2016 RBRH_RS06800 3535a88a9eb3faa57aa3d98fbd58c944 287 PANTHER PTHR23024:SF163 11 287 4.9E-41 T 23-04-2016 RBRH_RS06800 3535a88a9eb3faa57aa3d98fbd58c944 287 Pfam PF07859 alpha/beta hydrolase fold 75 162 8.3E-14 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RBRH_RS09595 e08a8f5327e23358283d2ecdf8c80d3f 355 PANTHER PTHR30213:SF1 54 351 9.5E-58 T 23-04-2016 RBRH_RS09595 e08a8f5327e23358283d2ecdf8c80d3f 355 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 90 346 5.6E-28 T 23-04-2016 IPR017039 Virulence factor BrkB RBRH_RS09595 e08a8f5327e23358283d2ecdf8c80d3f 355 PIRSF PIRSF035875 64 355 8.6E-60 T 23-04-2016 IPR017039 Virulence factor BrkB RBRH_RS09595 e08a8f5327e23358283d2ecdf8c80d3f 355 Pfam PF03631 Virulence factor BrkB 92 351 9.4E-53 T 23-04-2016 IPR017039 Virulence factor BrkB RBRH_RS09595 e08a8f5327e23358283d2ecdf8c80d3f 355 PANTHER PTHR30213 54 351 9.5E-58 T 23-04-2016 RBRH_RS02735 289fd98c12fd3c06f22f2cb4d7c74b24 206 PANTHER PTHR11067:SF9 5 204 9.8E-67 T 23-04-2016 RBRH_RS02735 289fd98c12fd3c06f22f2cb4d7c74b24 206 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 12 202 3.7E-46 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RBRH_RS02735 289fd98c12fd3c06f22f2cb4d7c74b24 206 Gene3D G3DSA:3.90.950.10 10 204 1.2E-68 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RBRH_RS02735 289fd98c12fd3c06f22f2cb4d7c74b24 206 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 10 204 45.858 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RBRH_RS02735 289fd98c12fd3c06f22f2cb4d7c74b24 206 PANTHER PTHR11067 5 204 9.8E-67 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RBRH_RS02735 289fd98c12fd3c06f22f2cb4d7c74b24 206 SUPERFAMILY SSF52972 9 204 4.71E-64 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RBRH_RS02735 289fd98c12fd3c06f22f2cb4d7c74b24 206 Pfam PF01725 Ham1 family 12 199 1.0E-50 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RBRH_RS08865 c91fa3d7d6410ddcd47b9f946cad7756 62 Pfam PF03050 Transposase IS66 family 4 55 1.4E-13 T 23-04-2016 IPR004291 Transposase, IS66 RBRH_RS11510 895e7a924646b19516125ee7136e64ca 215 PANTHER PTHR39559 48 186 4.1E-32 T 23-04-2016 RBRH_RS11510 895e7a924646b19516125ee7136e64ca 215 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 4 50 1.1E-6 T 23-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RBRH_RS11510 895e7a924646b19516125ee7136e64ca 215 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 48 186 8.4E-59 T 23-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RBRH_RS11510 895e7a924646b19516125ee7136e64ca 215 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 48 186 3.0E-56 T 23-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RBRH_RS10875 ef07627e998121b1ccdb90d019b62974 500 Pfam PF16483 Beta-1,3-glucanase 83 485 1.8E-19 T 23-04-2016 IPR032477 Beta-1,3-glucanase, N-terminal KEGG: 00500+3.2.1.39 RBRH_RS10570 4dbf3feca8817224a43f7cd89957a05c 156 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 28 149 4.6E-20 T 23-04-2016 IPR011747 Conserved hypothetical protein CHP02241 RBRH_RS10570 4dbf3feca8817224a43f7cd89957a05c 156 PANTHER PTHR38009:SF1 8 153 3.4E-13 T 23-04-2016 RBRH_RS10570 4dbf3feca8817224a43f7cd89957a05c 156 Pfam PF06841 T4-like virus tail tube protein gp19 19 149 8.0E-27 T 23-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 RBRH_RS10570 4dbf3feca8817224a43f7cd89957a05c 156 PANTHER PTHR38009 8 153 3.4E-13 T 23-04-2016 RBRH_RS02995 27a3dba805079d9ccc5cd0961490ae62 344 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 80 103 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RBRH_RS02995 27a3dba805079d9ccc5cd0961490ae62 344 Gene3D G3DSA:3.40.1190.20 41 336 5.9E-64 T 23-04-2016 IPR029056 Ribokinase-like RBRH_RS02995 27a3dba805079d9ccc5cd0961490ae62 344 Pfam PF00294 pfkB family carbohydrate kinase 41 331 5.2E-44 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB RBRH_RS02995 27a3dba805079d9ccc5cd0961490ae62 344 SUPERFAMILY SSF53613 41 335 1.12E-57 T 23-04-2016 IPR029056 Ribokinase-like RBRH_RS02995 27a3dba805079d9ccc5cd0961490ae62 344 PANTHER PTHR10584:SF159 29 336 1.4E-117 T 23-04-2016 RBRH_RS02995 27a3dba805079d9ccc5cd0961490ae62 344 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 36 337 2.5E-120 T 23-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 RBRH_RS02995 27a3dba805079d9ccc5cd0961490ae62 344 PANTHER PTHR10584 29 336 1.4E-117 T 23-04-2016 RBRH_RS00690 a51e33fe5a85e545260d8dcf3f8a7937 341 Pfam PF05954 Phage late control gene D protein (GPD) 97 323 6.3E-26 T 23-04-2016 RBRH_RS00690 a51e33fe5a85e545260d8dcf3f8a7937 341 SUPERFAMILY SSF69279 12 185 1.25E-26 T 23-04-2016 RBRH_RS08455 579b9c056668977bca20c1d0b044818a 111 SUPERFAMILY SSF53850 40 108 5.25E-9 T 23-04-2016 RBRH_RS08455 579b9c056668977bca20c1d0b044818a 111 Pfam PF03466 LysR substrate binding domain 40 105 3.1E-7 T 23-04-2016 IPR005119 LysR, substrate-binding RBRH_RS11400 65d21832992777dca85125e682e9d3c2 387 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 171 383 1.6E-65 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RBRH_RS11400 65d21832992777dca85125e682e9d3c2 387 Pfam PF02405 Permease MlaE 171 379 4.2E-66 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RBRH_RS11400 65d21832992777dca85125e682e9d3c2 387 PANTHER PTHR30188:SF3 53 385 8.1E-79 T 23-04-2016 RBRH_RS11400 65d21832992777dca85125e682e9d3c2 387 PANTHER PTHR30188 53 385 8.1E-79 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RBRH_RS03115 d2c0df82b1d2b0f07f6f5fa4c5a48b92 417 PANTHER PTHR10120 3 411 5.6E-112 T 23-04-2016 RBRH_RS03115 d2c0df82b1d2b0f07f6f5fa4c5a48b92 417 PANTHER PTHR10120:SF24 3 411 5.6E-112 T 23-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 RBRH_RS03115 d2c0df82b1d2b0f07f6f5fa4c5a48b92 417 Gene3D G3DSA:3.30.2010.10 199 291 7.9E-21 T 23-04-2016 RBRH_RS03115 d2c0df82b1d2b0f07f6f5fa4c5a48b92 417 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 24 202 8.4E-51 T 23-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 RBRH_RS03115 d2c0df82b1d2b0f07f6f5fa4c5a48b92 417 Pfam PF01435 Peptidase family M48 205 412 2.0E-40 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RBRH_RS00935 13a3eeca7f7ad1ad384df07768ece329 354 Pfam PF00534 Glycosyl transferases group 1 171 320 8.1E-26 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 RBRH_RS00935 13a3eeca7f7ad1ad384df07768ece329 354 Gene3D G3DSA:3.40.50.2000 170 309 1.2E-19 T 23-04-2016 RBRH_RS00935 13a3eeca7f7ad1ad384df07768ece329 354 PANTHER PTHR12526 1 351 2.7E-50 T 23-04-2016 RBRH_RS00935 13a3eeca7f7ad1ad384df07768ece329 354 SUPERFAMILY SSF53756 11 340 7.85E-63 T 23-04-2016 RBRH_RS00935 13a3eeca7f7ad1ad384df07768ece329 354 Pfam PF13439 Glycosyltransferase Family 4 18 119 1.5E-12 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RBRH_RS09425 3b85fa94f6685adb97ab550415219b40 85 Pfam PF00872 Transposase, Mutator family 46 83 2.0E-4 T 23-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RBRH_RS00820 98eae9d22ccbe42d626d6a94054792ca 68 Pfam PF05489 Phage Tail Protein X 1 56 4.7E-26 T 23-04-2016 IPR008861 Phage Tail Protein X-like RBRH_RS10605 bf1f4bd0ba4b926f20d23655e0f61802 124 Gene3D G3DSA:1.10.10.60 7 73 2.8E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS10605 bf1f4bd0ba4b926f20d23655e0f61802 124 Pfam PF01527 Transposase 6 60 6.4E-6 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS10605 bf1f4bd0ba4b926f20d23655e0f61802 124 SUPERFAMILY SSF46689 6 67 5.38E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS03505 7b0b7b83c13c7350adcfd4c54072dfc9 279 Pfam PF11236 Protein of unknown function (DUF3037) 7 133 5.6E-25 T 23-04-2016 IPR021398 Protein of unknown function DUF3037 RBRH_RS01085 f5182259671f8469b27506f27276fbc8 100 Pfam PF11387 Protein of unknown function (DUF2795) 49 92 2.5E-18 T 23-04-2016 IPR021527 Protein of unknown function DUF2795 RBRH_RS01455 f8c1ffd9b7833cde3184f1f4b566052e 308 PANTHER PTHR38034 29 178 1.3E-39 T 23-04-2016 RBRH_RS01455 f8c1ffd9b7833cde3184f1f4b566052e 308 PANTHER PTHR38034 194 304 1.3E-39 T 23-04-2016 RBRH_RS01455 f8c1ffd9b7833cde3184f1f4b566052e 308 Pfam PF01578 Cytochrome C assembly protein 60 302 6.3E-28 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RBRH_RS07705 3962b4f9d220d8f5e98fca9ac849fa26 284 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 113 253 1.2E-38 T 23-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 RBRH_RS07705 3962b4f9d220d8f5e98fca9ac849fa26 284 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 263 45.635 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RBRH_RS07705 3962b4f9d220d8f5e98fca9ac849fa26 284 PANTHER PTHR21367 23 264 5.3E-61 T 23-04-2016 IPR030700 Arginine-tRNA-protein transferase RBRH_RS07705 3962b4f9d220d8f5e98fca9ac849fa26 284 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 23 93 1.9E-18 T 23-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 RBRH_RS07705 3962b4f9d220d8f5e98fca9ac849fa26 284 PIRSF PIRSF037208 8 270 1.5E-85 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RBRH_RS07705 3962b4f9d220d8f5e98fca9ac849fa26 284 PANTHER PTHR21367:SF0 23 264 5.3E-61 T 23-04-2016 RBRH_RS07705 3962b4f9d220d8f5e98fca9ac849fa26 284 SUPERFAMILY SSF55729 87 260 4.59E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase RBRH_RS11110 e788e63962b830c4526f0a6b0aab11ad 212 Pfam PF01810 LysE type translocator 22 210 2.6E-35 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RBRH_RS11110 e788e63962b830c4526f0a6b0aab11ad 212 PANTHER PTHR30086:SF0 9 209 1.7E-72 T 23-04-2016 RBRH_RS11110 e788e63962b830c4526f0a6b0aab11ad 212 PANTHER PTHR30086 9 209 1.7E-72 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RBRH_RS01485 39a688f2f8b5e130fbbcd314909ee566 187 Pfam PF07382 Histone H1-like nucleoprotein HC2 1 186 2.5E-18 T 23-04-2016 IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 RBRH_RS05155 11c9636a715c6459db73640b3817bf40 179 Gene3D G3DSA:1.20.141.10 1 179 5.0E-45 T 23-04-2016 RBRH_RS05155 11c9636a715c6459db73640b3817bf40 179 SUPERFAMILY SSF53955 1 178 7.31E-41 T 23-04-2016 IPR023346 Lysozyme-like domain RBRH_RS05155 11c9636a715c6459db73640b3817bf40 179 Pfam PF05838 Glycosyl hydrolase 108 8 91 3.9E-22 T 23-04-2016 IPR008565 Protein of unknown function DUF847 RBRH_RS05155 11c9636a715c6459db73640b3817bf40 179 Pfam PF09374 Predicted Peptidoglycan domain 95 178 2.0E-16 T 23-04-2016 IPR018537 Peptidoglycan binding domain RBRH_RS02625 4b75d4db6f488ff14e7f63fe4d70d2ba 151 Pfam PF11811 Domain of unknown function (DUF3331) 65 145 7.2E-27 T 23-04-2016 IPR021769 Protein of unknown function DUF3331 RBRH_RS07765 ee08de527b63391d3003ee42c2cf3c58 418 Pfam PF01943 Polysaccharide biosynthesis protein 5 274 2.9E-32 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RBRH_RS07765 ee08de527b63391d3003ee42c2cf3c58 418 PANTHER PTHR30250 1 406 9.1E-22 T 23-04-2016 RBRH_RS11835 994540ea057d7776d0c9102ffeaa6a54 240 Pfam PF04172 LrgB-like family 25 236 2.2E-69 T 23-04-2016 IPR007300 CidB/LrgB family RBRH_RS11835 994540ea057d7776d0c9102ffeaa6a54 240 PANTHER PTHR30249 21 239 1.0E-94 T 23-04-2016 RBRH_RS11835 994540ea057d7776d0c9102ffeaa6a54 240 PANTHER PTHR30249:SF4 21 239 1.0E-94 T 23-04-2016 RBRH_RS09415 e60b8cfe3a1ed4f96387677c7a6bc919 80 Gene3D G3DSA:3.10.180.10 15 76 9.2E-10 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RBRH_RS09415 e60b8cfe3a1ed4f96387677c7a6bc919 80 SUPERFAMILY SSF54593 10 70 7.69E-5 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RBRH_RS11460 d4b928a7576fe09407a63b384274a739 108 Pfam PF08895 Domain of unknown function (DUF1840) 1 106 2.9E-34 T 23-04-2016 IPR014991 Protein of unknown function DUF1840 RBRH_RS00310 b0d698ac18ec2cd8e4f46f115c8e7194 483 Pfam PF01554 MatE 284 412 2.6E-15 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS00310 b0d698ac18ec2cd8e4f46f115c8e7194 483 Pfam PF01554 MatE 38 194 1.3E-23 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS00310 b0d698ac18ec2cd8e4f46f115c8e7194 483 TIGRFAM TIGR00797 matE: MATE efflux family protein 38 432 1.9E-73 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RBRH_RS00310 b0d698ac18ec2cd8e4f46f115c8e7194 483 PANTHER PTHR11206:SF94 3 450 1.5E-106 T 23-04-2016 RBRH_RS00310 b0d698ac18ec2cd8e4f46f115c8e7194 483 PANTHER PTHR11206 3 450 1.5E-106 T 23-04-2016 RBRH_RS07915 e64aba92050155c9279012923b6d16a4 263 Pfam PF11828 Protein of unknown function (DUF3348) 1 261 4.8E-90 T 23-04-2016 IPR021783 Protein of unknown function DUF3348 RBRH_RS04590 60def3888bb35cad631e0fce43c3f30e 326 Pfam PF11104 Type IV pilus assembly protein PilM; 15 199 2.0E-8 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM RBRH_RS07650 07577cf0df1a481cd4978e319c4bcb64 44 Pfam PF08085 Entericidin EcnA/B family 20 40 1.8E-9 T 23-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 RBRH_RS07890 8209c57fe1765fb81f1eb8be07e7e45c 82 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 6.9E-12 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain RBRH_RS09985 d333299d02b917657a1496cf31bfeb8a 170 Gene3D G3DSA:3.40.50.2020 11 145 5.7E-30 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS09985 d333299d02b917657a1496cf31bfeb8a 170 SUPERFAMILY SSF53271 9 145 5.77E-29 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like RBRH_RS09985 d333299d02b917657a1496cf31bfeb8a 170 Pfam PF00156 Phosphoribosyl transferase domain 12 136 6.3E-17 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RBRH_RS09985 d333299d02b917657a1496cf31bfeb8a 170 PANTHER PTHR11608 32 170 1.0E-41 T 23-04-2016 RBRH_RS06760 3f3233a69cc35e081b4aae4e8e787887 162 SUPERFAMILY SSF53383 4 72 2.68E-10 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RBRH_RS06760 3f3233a69cc35e081b4aae4e8e787887 162 Gene3D G3DSA:3.90.1150.10 22 72 6.5E-8 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RBRH_RS04890 c6f03e63de1a1d451b115a1c61d57b46 62 Gene3D G3DSA:3.40.640.10 34 58 1.7E-4 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RBRH_RS07370 a039f3f6bed4320e8a4f4878802accd8 335 PANTHER PTHR33217 1 266 9.3E-111 T 23-04-2016 RBRH_RS07370 a039f3f6bed4320e8a4f4878802accd8 335 ProSitePatterns PS01007 Transposases, Mutator family, signature. 106 130 - T 23-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RBRH_RS07370 a039f3f6bed4320e8a4f4878802accd8 335 Pfam PF00872 Transposase, Mutator family 1 253 1.1E-85 T 23-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RBRH_RS16400 beddca7dd2db340020972fa0f3fb4d13 181 Pfam PF00483 Nucleotidyl transferase 3 114 9.1E-5 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RBRH_RS16400 beddca7dd2db340020972fa0f3fb4d13 181 Gene3D G3DSA:2.160.10.10 135 181 1.7E-4 T 23-04-2016 RBRH_RS16400 beddca7dd2db340020972fa0f3fb4d13 181 SUPERFAMILY SSF53448 2 141 6.17E-24 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS16400 beddca7dd2db340020972fa0f3fb4d13 181 Gene3D G3DSA:3.90.550.10 2 133 1.7E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RBRH_RS16400 beddca7dd2db340020972fa0f3fb4d13 181 PANTHER PTHR22572 1 181 6.1E-53 T 23-04-2016 RBRH_RS16400 beddca7dd2db340020972fa0f3fb4d13 181 PANTHER PTHR22572:SF115 1 181 6.1E-53 T 23-04-2016 RBRH_RS08080 7902b0e60fc9378b48fb0cd6d7898528 128 SUPERFAMILY SSF48295 11 64 8.89E-11 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RBRH_RS08080 7902b0e60fc9378b48fb0cd6d7898528 128 Gene3D G3DSA:1.10.10.60 20 66 4.4E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 RBRH_RS08080 7902b0e60fc9378b48fb0cd6d7898528 128 Pfam PF01527 Transposase 15 73 8.8E-10 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS09395 a96ca1e610d08d1f854bfb8a091b35c6 62 Gene3D G3DSA:3.40.50.300 19 51 8.4E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS03935 587bb439838f2ed02e2db18e602c1600 363 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 119 362 2.2E-15 T 23-04-2016 IPR020049 Protein of unknown function DUF2184 RBRH_RS07545 0cb8c8b344c978a36d6029a822ebe6f1 227 PANTHER PTHR31088 2 224 5.9E-32 T 23-04-2016 RBRH_RS07545 0cb8c8b344c978a36d6029a822ebe6f1 227 Pfam PF04012 PspA/IM30 family 3 220 2.8E-27 T 23-04-2016 IPR007157 PspA/IM30 RBRH_RS11225 847e813891137a125449d97a783afc4c 173 Pfam PF10003 Integral membrane protein (DUF2244) 20 154 2.7E-44 T 23-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane RBRH_RS11225 847e813891137a125449d97a783afc4c 173 PIRSF PIRSF032162 2 160 9.9E-33 T 23-04-2016 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane RBRH_RS01070 133877f0316ddf5e9ea5f946d0c70ebd 230 Gene3D G3DSA:3.40.50.10320 2 222 1.9E-17 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain RBRH_RS01070 133877f0316ddf5e9ea5f946d0c70ebd 230 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 134 3.5E-9 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RBRH_RS01070 133877f0316ddf5e9ea5f946d0c70ebd 230 SUPERFAMILY SSF102588 4 226 1.2E-26 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain RBRH_RS10630 ade3a4652b2102ff063aa6b58343ac97 199 PANTHER PTHR33540 131 193 1.6E-24 T 23-04-2016 RBRH_RS10630 ade3a4652b2102ff063aa6b58343ac97 199 SUPERFAMILY SSF56112 69 178 1.77E-5 T 23-04-2016 IPR011009 Protein kinase-like domain RBRH_RS10630 ade3a4652b2102ff063aa6b58343ac97 199 PANTHER PTHR33540:SF1 131 193 1.6E-24 T 23-04-2016 RBRH_RS10630 ade3a4652b2102ff063aa6b58343ac97 199 Gene3D G3DSA:3.90.1200.10 104 188 3.1E-19 T 23-04-2016 RBRH_RS07905 992b0c0776d6e0a6d83bde010a54e015 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 135 4.8E-29 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RBRH_RS07905 992b0c0776d6e0a6d83bde010a54e015 138 PANTHER PTHR30558 10 137 1.5E-31 T 23-04-2016 RBRH_RS04735 700161d8cb0c6302fe8e47f07ac0957f 251 PIRSF PIRSF006648 6 248 1.1E-22 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS04735 700161d8cb0c6302fe8e47f07ac0957f 251 PANTHER PTHR30413 1 250 1.6E-61 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS04735 700161d8cb0c6302fe8e47f07ac0957f 251 PANTHER PTHR30413:SF2 1 250 1.6E-61 T 23-04-2016 RBRH_RS04735 700161d8cb0c6302fe8e47f07ac0957f 251 Pfam PF01061 ABC-2 type transporter 4 214 1.0E-34 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RBRH_RS04735 700161d8cb0c6302fe8e47f07ac0957f 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 191 210 6.8E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS04735 700161d8cb0c6302fe8e47f07ac0957f 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 53 75 6.8E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS04735 700161d8cb0c6302fe8e47f07ac0957f 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 171 190 6.8E-9 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RBRH_RS01090 bb4036c739a48e500be8b3c351a304b9 254 Pfam PF14344 Domain of unknown function (DUF4397) 36 150 3.7E-22 T 23-04-2016 IPR025510 Domain of unknown function DUF4397 RBRH_RS03535 b40e5452d6c5a6c3f92e09fecfbf3888 31 SUPERFAMILY SSF56349 2 28 2.44E-5 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RBRH_RS03535 b40e5452d6c5a6c3f92e09fecfbf3888 31 Gene3D G3DSA:1.10.443.10 2 29 9.8E-6 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RBRH_RS05160 023be8b623fcf8d72843e02201ba20a2 191 Pfam PF03245 Bacteriophage Rz lysis protein 49 173 8.0E-10 T 23-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 RBRH_RS09865 fac1e46944fb5b750b0c90f22810245c 392 Pfam PF04932 O-Antigen ligase 164 317 7.4E-21 T 23-04-2016 IPR007016 O-antigen ligase-related RBRH_RS09865 fac1e46944fb5b750b0c90f22810245c 392 PANTHER PTHR37422 3 392 6.6E-26 T 23-04-2016 RBRH_RS16290 9a84922d58cecc62949e2edd5a688a2f 106 Gene3D G3DSA:2.40.50.140 7 79 4.7E-4 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold RBRH_RS16290 9a84922d58cecc62949e2edd5a688a2f 106 PANTHER PTHR32294 2 96 8.8E-29 T 23-04-2016 RBRH_RS16290 9a84922d58cecc62949e2edd5a688a2f 106 PANTHER PTHR32294:SF4 2 96 8.8E-29 T 23-04-2016 RBRH_RS00195 995fa252bf2751548a79da24f0f22e45 146 SUPERFAMILY SSF69635 16 142 1.96E-14 T 23-04-2016 RBRH_RS00195 995fa252bf2751548a79da24f0f22e45 146 Pfam PF05932 Tir chaperone protein (CesT) family 19 136 4.7E-13 T 23-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 RBRH_RS00195 995fa252bf2751548a79da24f0f22e45 146 Gene3D G3DSA:3.30.1460.10 15 143 1.6E-13 T 23-04-2016 RBRH_RS03920 6261d4580ded80d09cf0e76bfe11f109 257 Pfam PF04233 Phage Mu protein F like protein 136 246 5.5E-11 T 23-04-2016 IPR006528 Phage head morphogenesis domain RBRH_RS08095 d42201cc34887b4f581c2e5e5346b33f 78 Pfam PF13817 IS66 C-terminal element 26 62 4.1E-16 T 23-04-2016 RBRH_RS00320 77c552205a15cb28d363c586682e0d35 254 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 15 225 3.3E-31 T 23-04-2016 IPR008775 Phytanoyl-CoA dioxygenase RBRH_RS00320 77c552205a15cb28d363c586682e0d35 254 SUPERFAMILY SSF51197 9 246 5.56E-53 T 23-04-2016 RBRH_RS00320 77c552205a15cb28d363c586682e0d35 254 Gene3D G3DSA:2.60.120.620 9 246 1.7E-52 T 23-04-2016 RBRH_RS00320 77c552205a15cb28d363c586682e0d35 254 PANTHER PTHR20883 10 238 4.6E-29 T 23-04-2016 RBRH_RS10925 2f4bcd56ef8f3e871e62898185d49a6f 305 Pfam PF12787 EcsC protein family 17 284 3.6E-51 T 23-04-2016 IPR024787 EcsC protein RBRH_RS05195 90bbee73da5d673b615938d6957780fa 66 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 3.9E-19 T 23-04-2016 IPR012451 Protein of unknown function DUF1656 RBRH_RS04790 c1266832b1c8b2f58f90a494bbd73cd0 126 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 17 104 5.5E-15 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RBRH_RS04790 c1266832b1c8b2f58f90a494bbd73cd0 126 PANTHER PTHR21256 5 124 3.4E-37 T 23-04-2016 RBRH_RS04790 c1266832b1c8b2f58f90a494bbd73cd0 126 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 14 101 1.0E-29 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RBRH_RS04790 c1266832b1c8b2f58f90a494bbd73cd0 126 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 11 101 21.119 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RBRH_RS04790 c1266832b1c8b2f58f90a494bbd73cd0 126 SUPERFAMILY SSF101386 12 105 3.36E-24 T 23-04-2016 RBRH_RS09530 413d1455095a558c057e6383231e06bc 143 Pfam PF05425 Copper resistance protein D 41 139 1.8E-15 T 23-04-2016 IPR008457 Copper resistance protein D GO:0016021 RBRH_RS05490 e2deeb376b1d84c22d4becb704230b37 188 PIRSF PIRSF017018 2 188 3.4E-82 T 23-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type RBRH_RS05490 e2deeb376b1d84c22d4becb704230b37 188 Pfam PF10634 Fe2+ transport protein 30 181 7.1E-70 T 23-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type RBRH_RS05370 a2ee90535af655f90e3df9c21830d3c5 126 Pfam PF11373 Protein of unknown function (DUF3175) 37 122 4.4E-41 T 23-04-2016 IPR021513 Ralstonia phage RSL1, Orf186 RBRH_RS00340 6e97dbb62e391b9b138e0e552a2ee746 259 Pfam PF01203 Type II secretion system (T2SS), protein N 47 256 7.6E-41 T 23-04-2016 IPR022792 Type II secretion system, protein N RBRH_RS11890 1be04a650d83ad41953087469a322ef9 294 PANTHER PTHR30606 9 294 6.4E-67 T 23-04-2016 RBRH_RS11890 1be04a650d83ad41953087469a322ef9 294 PANTHER PTHR30606:SF5 9 294 6.4E-67 T 23-04-2016 RBRH_RS11890 1be04a650d83ad41953087469a322ef9 294 PIRSF PIRSF026649 3 294 1.6E-73 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RBRH_RS11890 1be04a650d83ad41953087469a322ef9 294 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 2 285 1.4E-54 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RBRH_RS06055 eecb84356ff78ba670700394f6e471e6 589 PANTHER PTHR33908:SF3 18 433 3.5E-83 T 23-04-2016 RBRH_RS06055 eecb84356ff78ba670700394f6e471e6 589 PANTHER PTHR33908 18 433 3.5E-83 T 23-04-2016 RBRH_RS06055 eecb84356ff78ba670700394f6e471e6 589 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 90 252 2.4E-18 T 23-04-2016 RBRH_RS09170 50fa9f6b43b0795c8ee6de1113d51000 167 Pfam PF06271 RDD family 14 160 9.8E-20 T 23-04-2016 IPR010432 RDD RBRH_RS00650 25f2bf811a6300e78830dd9bd9f704e6 65 Pfam PF01695 IstB-like ATP binding protein 3 51 3.7E-7 T 23-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 RBRH_RS00650 25f2bf811a6300e78830dd9bd9f704e6 65 Gene3D G3DSA:3.40.50.300 16 51 3.6E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS16085 52c8def1ba112012b2a0f41c2daa89a3 302 Pfam PF14065 Protein of unknown function (DUF4255) 16 189 3.4E-27 T 23-04-2016 IPR025351 Protein of unknown function DUF4255 RBRH_RS02980 c0a3eddc4ceae7e714fc3aa33e7e4477 97 Pfam PF06305 Protein of unknown function (DUF1049) 23 83 1.2E-15 T 23-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 RBRH_RS09010 da94be51aa53572bb1317edb54802894 104 Pfam PF10993 Protein of unknown function (DUF2818) 5 100 2.1E-36 T 23-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane RBRH_RS09010 da94be51aa53572bb1317edb54802894 104 PIRSF PIRSF019883 1 104 4.9E-42 T 23-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane RBRH_RS09715 9e7587152141a8c419a8621e31c1882d 170 Gene3D G3DSA:3.40.50.450 6 148 1.6E-24 T 23-04-2016 RBRH_RS09715 9e7587152141a8c419a8621e31c1882d 170 SUPERFAMILY SSF102405 5 143 2.75E-21 T 23-04-2016 RBRH_RS16115 960701a8ec472ae4513b56984bccff4f 111 Pfam PF01609 Transposase DDE domain 1 111 3.2E-17 T 23-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RBRH_RS16115 960701a8ec472ae4513b56984bccff4f 111 PANTHER PTHR35604 1 111 7.2E-25 T 23-04-2016 RBRH_RS16115 960701a8ec472ae4513b56984bccff4f 111 PANTHER PTHR35604:SF2 1 111 7.2E-25 T 23-04-2016 RBRH_RS10205 edf7b35c1f73dbaccb6c22412961b5c8 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 104 5.9E-24 T 23-04-2016 IPR008407 Branched-chain amino acid transport, AzlD RBRH_RS06530 b46bbcf8219146959e22315fdcfe4d5c 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 7 117 1.6E-6 T 23-04-2016 IPR002810 NfeD-like, C-terminal domain RBRH_RS07930 3848611c85fb62f88e2047deaf12d946 219 Pfam PF11445 Protein of unknown function (DUF2894) 15 194 6.7E-71 T 23-04-2016 IPR021549 Protein of unknown function DUF2894 RBRH_RS02475 44e2b3a8fb63fa900f1bf829425404cf 254 Pfam PF04402 Protein of unknown function (DUF541) 53 248 1.6E-25 T 23-04-2016 IPR007497 Protein of unknown function DUF541 RBRH_RS11450 b6ebd1eae0ca38e0c2e4a682f8f16b0d 85 Pfam PF12091 Protein of unknown function (DUF3567) 1 85 1.0E-36 T 23-04-2016 IPR021951 Protein of unknown function DUF3567 RBRH_RS04945 97c74a813144f819e179f2caf71efeff 333 Pfam PF05425 Copper resistance protein D 213 327 8.6E-13 T 23-04-2016 IPR008457 Copper resistance protein D GO:0016021 RBRH_RS08245 3cc408117d6bdaf9f8b4a701373360e1 396 PIRSF PIRSF015283 6 395 8.5E-107 T 23-04-2016 IPR016631 Regulatory, RpfE RBRH_RS10280 752eec3258581a88bca1618d77bcebeb 220 Pfam PF11136 Protein of unknown function (DUF2889) 13 137 6.0E-36 T 23-04-2016 IPR021312 Protein of unknown function DUF2889 RBRH_RS03485 84fb3940c6a4a6c95d32b6291981090b 456 Gene3D G3DSA:1.20.1280.50 50 94 4.3E-4 T 23-04-2016 RBRH_RS04920 4962fdc04ad88374af328b4c805b6a43 197 Gene3D G3DSA:3.40.109.10 6 195 1.3E-47 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RBRH_RS04920 4962fdc04ad88374af328b4c805b6a43 197 SUPERFAMILY SSF55469 7 195 5.76E-48 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RBRH_RS04920 4962fdc04ad88374af328b4c805b6a43 197 Pfam PF00881 Nitroreductase family 17 160 6.6E-24 T 23-04-2016 IPR029479 Nitroreductase RBRH_RS04920 4962fdc04ad88374af328b4c805b6a43 197 PANTHER PTHR23026 11 197 1.1E-27 T 23-04-2016 RBRH_RS16195 673ce55d97d6bc155d986a9e49097738 63 Gene3D G3DSA:3.40.109.10 1 62 6.7E-7 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 RBRH_RS01100 dbb2dd7e79f7dc54a7baeca9d6e7dd40 239 Pfam PF06551 Protein of unknown function (DUF1120) 37 98 2.3E-4 T 23-04-2016 IPR010546 Protein of unknown function DUF1120 RBRH_RS08130 f640cf0838ed62f4f6e07c303d8ee44c 380 Pfam PF06804 NlpB/DapX lipoprotein 40 377 9.1E-43 T 23-04-2016 IPR010653 NlpB/DapX lipoprotein RBRH_RS03820 67391d347c83b06f323455069c9e2a00 72 Pfam PF13986 Domain of unknown function (DUF4224) 5 49 5.1E-17 T 23-04-2016 IPR025319 Domain of unknown function DUF4224 RBRH_RS08515 856dbb92954ee6e4d44774163d64d904 130 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 15 125 1.6E-20 T 23-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III RBRH_RS00815 3c95cf5a7cd9c8db2fd7bd566ea791b4 114 Pfam PF16931 Putative phage holin 1 112 1.5E-24 T 23-04-2016 IPR032637 Putative phage holin-like RBRH_RS09495 b355c79630f126c38c7ceb865e2382b5 314 SUPERFAMILY SSF53335 67 278 6.38E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS09495 b355c79630f126c38c7ceb865e2382b5 314 Gene3D G3DSA:3.40.50.150 63 291 4.0E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RBRH_RS05220 508644c88f2246aced348478860a52d5 141 Pfam PF09842 Predicted membrane protein (DUF2069) 22 121 5.5E-31 T 23-04-2016 IPR018643 Protein of unknown function DUF2069, membrane RBRH_RS00740 a2566bd94647cfbc394620432786c809 180 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 5 142 5.7E-48 T 23-04-2016 IPR006521 Tail protein I RBRH_RS00740 a2566bd94647cfbc394620432786c809 180 Pfam PF09684 Phage tail protein (Tail_P2_I) 5 139 2.6E-44 T 23-04-2016 IPR006521 Tail protein I RBRH_RS13830 844baf04c4c9f731578d880f50c0f2f0 85 Gene3D G3DSA:3.40.50.300 16 82 9.0E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RBRH_RS08885 7743d587a978f9502633834a75a31d5b 405 Pfam PF11062 Protein of unknown function (DUF2863) 2 404 7.9E-182 T 23-04-2016 IPR021292 Protein of unknown function DUF2863 RBRH_RS02120 39c596c62ac73812d627aa65222b1594 78 Gene3D G3DSA:1.20.1250.20 11 77 9.3E-5 T 23-04-2016 RBRH_RS06135 ca49f7a8d46bcc37dd734ebb9db09bf9 294 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 28 263 2.7E-55 T 23-04-2016 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related RBRH_RS00510 b1af9cda981116e289205a8364698cdc 179 Pfam PF03899 ATP synthase I chain 71 166 5.5E-19 T 23-04-2016 IPR005598 ATP synthase protein I RBRH_RS10145 99f153ef31c4fb79a8e2fdad8ee6a3b2 163 Gene3D G3DSA:2.60.40.10 96 151 1.2E-5 T 23-04-2016 IPR013783 Immunoglobulin-like fold RBRH_RS03495 ae01bd327939edc6093b57ee03260190 81 Pfam PF01527 Transposase 2 47 8.0E-8 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RBRH_RS07960 5fcbb207d229f57faa6a2fe7f1f7681d 73 Pfam PF11278 Protein of unknown function (DUF3079) 1 50 8.6E-33 T 23-04-2016 IPR021430 Protein of unknown function DUF3079 RBRH_RS16560 be71184dbaabe36b60184b73e48d8b17 194 SUPERFAMILY SSF100950 100 193 2.09E-9 T 23-04-2016 RBRH_RS16560 be71184dbaabe36b60184b73e48d8b17 194 Gene3D G3DSA:3.40.50.10420 101 193 3.5E-12 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RBRH_RS09790 de3ec2830bb9e20b1d46a355fcfd48e8 200 Pfam PF07273 Protein of unknown function (DUF1439) 49 175 8.2E-14 T 23-04-2016 IPR010835 Protein of unknown function DUF1439 RBRH_RS09825 d27fbbfa570b0373811c94a749a462c8 294 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 23 293 5.3E-120 T 23-04-2016 IPR021266 Kdo hydroxylase RBRH_RS16205 bf48fcc29ac79d6fb44c417f2a849106 60 Pfam PF13586 Transposase DDE domain 6 52 6.8E-11 T 23-04-2016 IPR025668 Transposase DDE domain RBRH_RS08990 7822eaccc9d586f31d0aaaa870b3b2d4 320 SUPERFAMILY SSF53474 126 243 2.95E-7 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS08990 7822eaccc9d586f31d0aaaa870b3b2d4 320 Gene3D G3DSA:3.40.50.1820 125 305 2.6E-9 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold RBRH_RS02880 7e915fae45aab6ebae3f3f8ce1b264ea 83 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 6 69 9.3E-26 T 23-04-2016 IPR021074 Formate dehydrogenase, delta subunit RBRH_RS02015 429c326a0f8de1d5cd6ed3f2c97ba33d 115 Pfam PF12112 Protein of unknown function (DUF3579) 7 95 3.6E-38 T 23-04-2016 IPR021969 Protein of unknown function DUF3579 RBRH_RS03215 2f1209b18557f6b0a40ab1d8889c307f 473 Pfam PF16980 Putative citrate transport 30 471 2.8E-191 T 23-04-2016 IPR031566 Putative citrate transporter RBRH_RS05600 b73759089c3beb12d0c6d87f76ec3762 246 Pfam PF13471 Transglutaminase-like superfamily 125 235 9.3E-19 T 23-04-2016 IPR032708 Microcin J25-processing protein McjB, C-terminal RBRH_RS01425 d00bed5c77e24fb343f08a1dee16ff31 199 Pfam PF08750 CNP1-like family 54 189 8.7E-50 T 23-04-2016 IPR014861 Uncharacterised domain CNP1 RBRH_RS01145 fe780f1005717b4e5a7fae77a756df8a 96 Gene3D G3DSA:3.30.70.920 1 26 3.3E-5 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RBRH_RS03825 1346fc55f7b026cde0c3d011c1820f4c 168 Pfam PF05565 Siphovirus Gp157 5 167 3.7E-51 T 23-04-2016 IPR008840 Siphovirus Gp157 RBRH_RS01985 5417bc2a31d293b084b3c9298c885cd3 305 Pfam PF09572 XamI restriction endonuclease 56 290 6.7E-76 T 23-04-2016 IPR019072 Restriction endonuclease, type II, XamI GO:0003677|GO:0009036|GO:0009307 RBRH_RS01625 10471b6554c75a31ff5186ed6b1fc393 62 Pfam PF01618 MotA/TolQ/ExbB proton channel family 40 62 2.6E-5 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RBRH_RS03840 d684a15509f3e9708d4f8b2ba7dc3472 149 Pfam PF07798 Protein of unknown function (DUF1640) 6 125 9.2E-12 T 23-04-2016 IPR024461 Coiled-coil domain-containing protein 90-like RBRH_RS16150 8922c2e7a0be92e120d09a4c9fbf7c02 112 SUPERFAMILY SSF48600 2 94 8.97E-12 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RBRH_RS03970 20807fe55598b13cf6f72db65b65c469 148 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 31 37 - T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RBRH_RS02940 7d0444ae4c8974ada0956baa06f8888d 199 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 124 180 6.5E-15 T 23-04-2016 IPR018637 Domain of unknown function DUF2059 RBRH_RS16170 724e9d44ef8a88a72c4ecc12d155701b 344 SUPERFAMILY SSF88874 166 261 2.49E-10 T 23-04-2016 RBRH_RS16170 724e9d44ef8a88a72c4ecc12d155701b 344 SUPERFAMILY SSF88874 289 338 2.49E-10 T 23-04-2016 RBRH_RS07490 cbd3ba0d847a7ab89544e72702d751fb 193 Pfam PF06841 T4-like virus tail tube protein gp19 29 186 4.9E-25 T 23-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 RBRH_RS07490 cbd3ba0d847a7ab89544e72702d751fb 193 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 33 187 4.8E-21 T 23-04-2016 IPR011747 Conserved hypothetical protein CHP02241 RBRH_RS16230 cd73f3b63233d6de4daa2844ca2b69de 309 Pfam PF14065 Protein of unknown function (DUF4255) 22 196 2.2E-31 T 23-04-2016 IPR025351 Protein of unknown function DUF4255 RBRH_RS00115 5c983503e0c3d3221f9c28ba0ad5f2b3 180 Pfam PF06841 T4-like virus tail tube protein gp19 51 171 1.3E-20 T 23-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198