locus-tag	class	description
BJG93_RS00025	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BJG93_RS00035	COG1181	Belongs to the D-alanine--D-alanine ligase family
BJG93_RS00045	COG0436	Aminotransferase
BJG93_RS00055	COG2197	response regulator
BJG93_RS00070	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
BJG93_RS00080	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BJG93_RS00100	COG1278	Cold shock
BJG93_RS00105	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BJG93_RS00110	COG0542	response to heat
BJG93_RS00115	COG0756	dUTP diphosphatase activity
BJG93_RS00120	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJG93_RS00125	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BJG93_RS00130	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BJG93_RS00135	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BJG93_RS00140	COG0196	riboflavin kinase activity
BJG93_RS00145	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BJG93_RS00150	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BJG93_RS00150	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BJG93_RS00165	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BJG93_RS00175	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BJG93_RS00180	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BJG93_RS00185	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BJG93_RS00190	COG2003	Belongs to the UPF0758 family
BJG93_RS00195	COG1047	Peptidyl-prolyl cis-trans
BJG93_RS00200	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BJG93_RS00205	COG0683	leucine binding
BJG93_RS00235	COG0456	acetyltransferase
BJG93_RS00240	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BJG93_RS00260	COG1187	pseudouridine synthase activity
BJG93_RS00275	COG1446	asparaginase
BJG93_RS00280	COG4172	Belongs to the ABC transporter superfamily
BJG93_RS00285	COG0747	negative chemotaxis
BJG93_RS00295	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJG93_RS00310	COG0596	Alpha beta hydrolase
BJG93_RS00345	COG1968	undecaprenyl-diphosphatase activity
BJG93_RS00350	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BJG93_RS00360	COG0840	transmembrane signaling receptor activity
BJG93_RS00365	COG0762	integral membrane protein
BJG93_RS00395	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BJG93_RS00405	COG0436	Aminotransferase
BJG93_RS00410	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BJG93_RS00415	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BJG93_RS00460	COG1309	transcriptional regulator
BJG93_RS00480	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJG93_RS00500	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BJG93_RS00500	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BJG93_RS00505	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BJG93_RS00510	COG2814	Major facilitator Superfamily
BJG93_RS00605	COG1401	restriction endodeoxyribonuclease activity
BJG93_RS00605	COG1401	restriction endodeoxyribonuclease activity
BJG93_RS00640	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BJG93_RS00750	COG2002	toxin-antitoxin pair type II binding
BJG93_RS00755	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BJG93_RS00760	COG0732	type I restriction modification DNA specificity domain
BJG93_RS00765	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BJG93_RS00800	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BJG93_RS00805	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BJG93_RS00810	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BJG93_RS00815	COG1561	YicC-like family, N-terminal region
BJG93_RS00820	COG0194	GDP metabolic process
BJG93_RS00830	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BJG93_RS00855	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJG93_RS00870	COG1278	Cold shock
BJG93_RS00875	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BJG93_RS00875	COG1199	ATP-dependent helicase activity
BJG93_RS00900	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
BJG93_RS00905	COG0308	aminopeptidase N
BJG93_RS00915	COG2119	membrane
BJG93_RS00935	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BJG93_RS00955	COG2986	histidine ammonia-lyase
BJG93_RS00975	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJG93_RS00985	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS00990	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJG93_RS01005	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BJG93_RS01010	COG0644	oxidoreductase
BJG93_RS01015	COG0402	S-adenosylhomocysteine deaminase activity
BJG93_RS01020	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BJG93_RS01045	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BJG93_RS01050	COG0154	amidase activity
BJG93_RS01055	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BJG93_RS01055	COG4651	solute:proton antiporter activity
BJG93_RS01060	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BJG93_RS01100	COG3383	formate dehydrogenase (NAD+) activity
BJG93_RS01115	COG1910	domain protein
BJG93_RS01130	COG0546	phosphoglycolate phosphatase activity
BJG93_RS01135	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BJG93_RS01155	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BJG93_RS01165	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BJG93_RS01170	COG0287	Prephenate dehydrogenase
BJG93_RS01175	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BJG93_RS01180	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BJG93_RS01190	COG0776	regulation of translation
BJG93_RS01200	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BJG93_RS01210	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
BJG93_RS01215	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BJG93_RS01230	COG2951	lytic endotransglycosylase activity
BJG93_RS01235	COG0123	including yeast histone deacetylase and acetoin utilization protein
BJG93_RS01245	COG2267	carboxylic ester hydrolase activity
BJG93_RS01250	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BJG93_RS01255	COG2011	ABC-type metal ion transport system permease component
BJG93_RS01275	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS01280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BJG93_RS01305	COG0228	four-way junction DNA binding
BJG93_RS01310	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BJG93_RS01315	COG0336	Belongs to the RNA methyltransferase TrmD family
BJG93_RS01320	COG0335	large ribosomal subunit rRNA binding
BJG93_RS01330	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BJG93_RS01340	COG1162	GTPase activity
BJG93_RS01345	COG0501	Belongs to the peptidase M48B family
BJG93_RS01350	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BJG93_RS01355	COG0521	Mo-molybdopterin cofactor biosynthetic process
BJG93_RS01360	COG3028	Belongs to the UPF0307 family
BJG93_RS01365	COG0312	modulator of DNA gyrase
BJG93_RS01370	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BJG93_RS01420	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BJG93_RS01440	COG0114	fumarate hydratase activity
BJG93_RS01445	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BJG93_RS01455	COG0534	Mate efflux family protein
BJG93_RS01460	COG2501	S4 domain
BJG93_RS01475	COG0210	DNA helicase
BJG93_RS01490	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BJG93_RS01500	COG3045	CreA protein
BJG93_RS01515	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BJG93_RS01540	COG1322	Protein conserved in bacteria
BJG93_RS01550	COG0303	'Molybdopterin
BJG93_RS01560	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BJG93_RS01565	COG1530	ribonuclease E activity
BJG93_RS01585	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BJG93_RS01585	COG0616	signal peptide processing
BJG93_RS01595	COG0424	maF-like protein
BJG93_RS01600	COG1399	metal-binding, possibly nucleic acid-binding protein
BJG93_RS01605	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BJG93_RS01610	COG0416	fatty acid biosynthetic process
BJG93_RS01615	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BJG93_RS01635	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJG93_RS01660	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJG93_RS01670	COG0481	GTPase activity
BJG93_RS01675	COG0681	Belongs to the peptidase S26 family
BJG93_RS01680	COG0571	ribonuclease III activity
BJG93_RS01685	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BJG93_RS01690	COG1381	Involved in DNA repair and RecF pathway recombination
BJG93_RS01695	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BJG93_RS01700	COG0736	holo-[acyl-carrier-protein] synthase activity
BJG93_RS01710	COG2204	response regulator
BJG93_RS01715	COG3237	CsbD-like
BJG93_RS01720	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BJG93_RS01730	COG0322	excinuclease ABC activity
BJG93_RS01760	COG2153	protein acetylation
BJG93_RS01790	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
BJG93_RS01795	COG1132	(ABC) transporter
BJG93_RS01800	COG0438	transferase activity, transferring glycosyl groups
BJG93_RS01815	COG1132	(ABC) transporter
BJG93_RS01825	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BJG93_RS01830	COG0328	RNA-DNA hybrid ribonuclease activity
BJG93_RS01835	COG2226	methyltransferase
BJG93_RS01840	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BJG93_RS01845	COG1388	LysM domain
BJG93_RS01845	COG0741	lytic transglycosylase activity
BJG93_RS01855	COG0505	Belongs to the CarA family
BJG93_RS01860	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BJG93_RS01865	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BJG93_RS01875	COG1534	Rna-binding protein
BJG93_RS01880	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
BJG93_RS01885	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BJG93_RS01895	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BJG93_RS01900	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BJG93_RS01905	COG0573	inorganic phosphate transmembrane transporter activity
BJG93_RS01910	COG0581	inorganic phosphate transmembrane transporter activity
BJG93_RS01915	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BJG93_RS01925	COG0745	RESPONSE REGULATOR receiver
BJG93_RS01935	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BJG93_RS01965	COG0534	Mate efflux family protein
BJG93_RS01980	COG4942	peptidase
BJG93_RS01990	COG1968	undecaprenyl-diphosphatase activity
BJG93_RS02000	COG0840	transmembrane signaling receptor activity
BJG93_RS02010	COG1051	belongs to the nudix hydrolase family
BJG93_RS02020	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BJG93_RS02035	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJG93_RS02040	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BJG93_RS02050	COG0477	Major facilitator Superfamily
BJG93_RS02055	COG2816	NAD+ diphosphatase activity
BJG93_RS02065	COG0824	Thioesterase
BJG93_RS02080	COG0411	ABC transporter
BJG93_RS02090	COG3718	enzyme involved in inositol metabolism
BJG93_RS02100	COG3962	Belongs to the TPP enzyme family
BJG93_RS02110	COG1129	ABC transporter
BJG93_RS02115	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJG93_RS02130	COG0673	inositol 2-dehydrogenase activity
BJG93_RS02135	COG0673	inositol 2-dehydrogenase activity
BJG93_RS02140	COG0425	Belongs to the sulfur carrier protein TusA family
BJG93_RS02145	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BJG93_RS02150	COG0525	valine-tRNA ligase activity
BJG93_RS02155	COG0210	DNA helicase
BJG93_RS02160	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BJG93_RS02165	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BJG93_RS02225	COG0582	viral genome integration into host DNA
BJG93_RS02230	COG2223	nitrite transmembrane transporter activity
BJG93_RS02235	COG0840	transmembrane signaling receptor activity
BJG93_RS02240	COG1566	PFAM secretion protein HlyD family protein
BJG93_RS02260	COG0583	DNA-binding transcription factor activity
BJG93_RS02270	COG0277	FAD linked oxidase domain protein
BJG93_RS02285	COG1295	ribonuclease BN
BJG93_RS02315	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BJG93_RS02325	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS02335	COG4566	intracellular signal transduction
BJG93_RS02355	COG0251	oxidation-reduction process
BJG93_RS02360	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BJG93_RS02370	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BJG93_RS02375	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BJG93_RS02380	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BJG93_RS02390	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BJG93_RS02400	COG0776	regulation of translation
BJG93_RS02425	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS02430	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS02455	COG3511	phospholipase C
BJG93_RS02480	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BJG93_RS02500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJG93_RS02505	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BJG93_RS02530	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BJG93_RS02540	COG1620	l-lactate permease
BJG93_RS02555	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
BJG93_RS02575	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
BJG93_RS02580	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BJG93_RS02605	COG4585	Histidine kinase
BJG93_RS02625	COG2197	response regulator
BJG93_RS02630	COG2201	protein-glutamate methylesterase activity
BJG93_RS02640	COG2814	Major facilitator Superfamily
BJG93_RS02645	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BJG93_RS02650	COG3842	ATPase activity
BJG93_RS02655	COG1177	transmembrane transport
BJG93_RS02670	COG1609	Transcriptional regulator
BJG93_RS02695	COG1451	nucleotide metabolic process
BJG93_RS02700	COG0243	molybdopterin cofactor binding
BJG93_RS02705	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJG93_RS02735	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BJG93_RS02760	COG0477	Major facilitator Superfamily
BJG93_RS02765	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
BJG93_RS02770	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BJG93_RS02770	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BJG93_RS02775	COG1643	Atp-dependent helicase
BJG93_RS02800	COG1546	Belongs to the CinA family
BJG93_RS02800	COG1058	Belongs to the CinA family
BJG93_RS02810	COG0174	glutamine synthetase
BJG93_RS02815	COG3852	Histidine kinase
BJG93_RS02825	COG1505	serine-type exopeptidase activity
BJG93_RS02840	COG1794	racemase activity, acting on amino acids and derivatives
BJG93_RS02845	COG0402	S-adenosylhomocysteine deaminase activity
BJG93_RS02850	COG0339	signal peptide processing
BJG93_RS02855	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BJG93_RS02860	COG4566	intracellular signal transduction
BJG93_RS02870	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BJG93_RS02875	COG0508	dehydrogenase complex catalyzes the overall conversion of
BJG93_RS02880	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BJG93_RS02900	COG1414	Transcriptional regulator
BJG93_RS02925	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BJG93_RS02935	COG1104	cysteine desulfurase activity
BJG93_RS02940	COG0822	iron-sulfur transferase activity
BJG93_RS02945	COG0316	Belongs to the HesB IscA family
BJG93_RS02950	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BJG93_RS02955	COG0443	Heat shock 70 kDa protein
BJG93_RS02965	COG2975	iron-sulfur cluster assembly
BJG93_RS02975	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BJG93_RS02980	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BJG93_RS02990	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BJG93_RS03005	COG1136	(ABC) transporter
BJG93_RS03010	COG0084	hydrolase, TatD family'
BJG93_RS03015	COG0658	competence protein
BJG93_RS03015	COG2333	competence protein COMEC
BJG93_RS03020	COG2267	carboxylic ester hydrolase activity
BJG93_RS03025	COG0504	CTP synthase activity
BJG93_RS03030	COG2877	3-deoxy-8-phosphooctulonate synthase activity
BJG93_RS03035	COG0148	phosphopyruvate hydratase activity
BJG93_RS03040	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BJG93_RS03050	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BJG93_RS03060	COG2833	Protein of unknown function (DUF455)
BJG93_RS03065	COG0596	Alpha beta hydrolase
BJG93_RS03070	COG0613	PHP domain protein
BJG93_RS03075	COG0009	L-threonylcarbamoyladenylate synthase
BJG93_RS03080	COG1994	Peptidase M50
BJG93_RS03085	COG0180	Tryptophanyl-tRNA synthetase
BJG93_RS03095	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJG93_RS03100	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BJG93_RS03105	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BJG93_RS03110	COG0670	Belongs to the BI1 family
BJG93_RS03115	COG0105	UTP biosynthetic process
BJG93_RS03120	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BJG93_RS03130	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BJG93_RS03135	COG0124	histidyl-tRNA synthetase
BJG93_RS03145	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BJG93_RS03150	COG1160	GTP binding
BJG93_RS03155	COG1923	regulation of RNA biosynthetic process
BJG93_RS03160	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BJG93_RS03165	COG0330	HflC and HflK could
BJG93_RS03180	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BJG93_RS03185	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BJG93_RS03190	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BJG93_RS03195	COG3158	transport of potassium into the cell
BJG93_RS03200	COG2183	response to ionizing radiation
BJG93_RS03215	COG1199	ATP-dependent helicase activity
BJG93_RS03220	COG2850	peptidyl-arginine hydroxylation
BJG93_RS03235	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BJG93_RS03240	COG0477	Major facilitator Superfamily
BJG93_RS03245	COG0483	inositol monophosphate 1-phosphatase activity
BJG93_RS03255	COG1045	serine acetyltransferase
BJG93_RS03260	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BJG93_RS03270	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BJG93_RS03280	COG0215	cysteine-tRNA ligase activity
BJG93_RS03290	COG0825	malonyl-CoA metabolic process
BJG93_RS03295	COG0037	tRNA processing
BJG93_RS03300	COG0527	aspartate kinase activity
BJG93_RS03320	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJG93_RS03330	COG2271	Major facilitator Superfamily
BJG93_RS03340	COG4166	transmembrane transport
BJG93_RS03345	COG4174	ABC transporter (Permease)
BJG93_RS03350	COG4239	(ABC) transporter, permease
BJG93_RS03355	COG4172	Belongs to the ABC transporter superfamily
BJG93_RS03360	COG0791	NLP P60 protein
BJG93_RS03365	COG1752	Esterase of the alpha-beta hydrolase superfamily
BJG93_RS03370	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BJG93_RS03415	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BJG93_RS03425	COG0583	DNA-binding transcription factor activity
BJG93_RS03435	COG2224	Isocitrate lyase
BJG93_RS03440	COG0513	Belongs to the DEAD box helicase family
BJG93_RS03450	COG1214	PFAM Peptidase M22, glycoprotease
BJG93_RS03460	COG1573	uracil-dna glycosylase
BJG93_RS03470	COG0351	phosphomethylpyrimidine kinase
BJG93_RS03475	COG0477	Major facilitator Superfamily
BJG93_RS03480	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BJG93_RS03495	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJG93_RS03500	COG0488	(ABC) transporter
BJG93_RS03505	COG0386	Belongs to the glutathione peroxidase family
BJG93_RS03515	COG2890	protein-(glutamine-N5) methyltransferase activity
BJG93_RS03520	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BJG93_RS03525	COG1393	Belongs to the ArsC family
BJG93_RS03530	COG2171	N-acyltransferase activity
BJG93_RS03555	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BJG93_RS03560	COG0242	peptide deformylase activity
BJG93_RS03565	COG1187	pseudouridine synthase activity
BJG93_RS03575	COG0024	Methionine aminopeptidase
BJG93_RS03580	COG0052	Belongs to the universal ribosomal protein uS2 family
BJG93_RS03585	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BJG93_RS03590	COG0528	UMP kinase activity
BJG93_RS03595	COG0233	cytoplasmic translational termination
BJG93_RS03600	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BJG93_RS03610	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BJG93_RS03615	COG0750	zinc metalloprotease
BJG93_RS03625	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BJG93_RS03630	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BJG93_RS03640	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BJG93_RS03645	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BJG93_RS03650	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BJG93_RS03655	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BJG93_RS03660	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BJG93_RS03675	COG0330	HflC and HflK could
BJG93_RS03680	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BJG93_RS03685	COG2867	negative regulation of translational initiation
BJG93_RS03690	COG2914	Belongs to the UPF0125 (RnfH) family
BJG93_RS03695	COG0697	spore germination
BJG93_RS03710	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BJG93_RS03710	COG0519	Catalyzes the synthesis of GMP from XMP
BJG93_RS03715	COG0513	Belongs to the DEAD box helicase family
BJG93_RS03730	COG2207	Transcriptional regulator
BJG93_RS03735	COG0667	Aldo Keto reductase
BJG93_RS03755	COG0590	tRNA wobble adenosine to inosine editing
BJG93_RS03760	COG1619	proteins homologs of microcin C7 resistance protein MccF
BJG93_RS03765	COG1802	Transcriptional regulator
BJG93_RS03770	COG1953	Uracil, thiamine, allantoin
BJG93_RS03785	COG3195	allantoin biosynthetic process
BJG93_RS03785	COG3648	Uricase
BJG93_RS03790	COG4266	Belongs to the allantoicase family
BJG93_RS03810	COG2351	hydroxyisourate hydrolase activity
BJG93_RS03825	COG3845	ABC transporter
BJG93_RS03830	COG4603	Belongs to the binding-protein-dependent transport system permease family
BJG93_RS03835	COG1079	Belongs to the binding-protein-dependent transport system permease family
BJG93_RS03845	COG3360	Dodecin
BJG93_RS03850	COG0488	(ABC) transporter
BJG93_RS03860	COG1914	H( )-stimulated, divalent metal cation uptake system
BJG93_RS03870	COG3842	ATPase activity
BJG93_RS03875	COG1176	ABC-type spermidine putrescine transport system, permease component I
BJG93_RS03880	COG1177	transmembrane transport
BJG93_RS03915	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJG93_RS03935	COG0583	DNA-binding transcription factor activity
BJG93_RS03955	COG0038	chloride channel
BJG93_RS03965	COG2855	membrane
BJG93_RS03980	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJG93_RS03990	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BJG93_RS03995	COG1609	Transcriptional regulator
BJG93_RS04025	COG0039	L-malate dehydrogenase activity
BJG93_RS04045	COG0598	Magnesium transport protein CorA
BJG93_RS04050	COG1879	ABC-type sugar transport system periplasmic component
BJG93_RS04055	COG1129	ABC transporter
BJG93_RS04060	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJG93_RS04065	COG1609	Transcriptional regulator
BJG93_RS04070	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJG93_RS04075	COG0840	transmembrane signaling receptor activity
BJG93_RS04080	COG3971	2-oxopent-4-enoate hydratase activity
BJG93_RS04085	COG2766	serine protein kinase
BJG93_RS04090	COG2718	Belongs to the UPF0229 family
BJG93_RS04095	COG2719	SpoVR family
BJG93_RS04100	COG0477	Major facilitator Superfamily
BJG93_RS04120	COG0583	DNA-binding transcription factor activity
BJG93_RS04125	COG0492	ferredoxin-NADP+ reductase activity
BJG93_RS04135	COG2205	protein histidine kinase activity
BJG93_RS04160	COG0477	Major facilitator Superfamily
BJG93_RS04185	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS04190	COG1053	succinate dehydrogenase
BJG93_RS04215	COG1414	Transcriptional regulator
BJG93_RS04220	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS04245	COG1278	Cold shock
BJG93_RS04275	COG0642	Histidine kinase
BJG93_RS04300	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJG93_RS04320	COG0642	Histidine kinase
BJG93_RS04355	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS04365	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BJG93_RS04370	COG0583	DNA-binding transcription factor activity
BJG93_RS04375	COG0137	argininosuccinate synthase activity
BJG93_RS04380	COG3706	GGDEF domain
BJG93_RS04380	COG2203	Gaf domain
BJG93_RS04380	COG4251	negative regulation of phosphorylation
BJG93_RS04380	COG5001	Diguanylate cyclase
BJG93_RS04385	COG0741	lytic transglycosylase activity
BJG93_RS04385	COG1196	nuclear chromosome segregation
BJG93_RS04385	COG0739	heme binding
BJG93_RS04390	COG0443	Heat shock 70 kDa protein
BJG93_RS04395	COG0443	Heat shock 70 kDa protein
BJG93_RS04405	COG4974	Belongs to the 'phage' integrase family
BJG93_RS04410	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BJG93_RS04440	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BJG93_RS04450	COG3038	cytochrome b561
BJG93_RS04455	COG2070	2-Nitropropane dioxygenase
BJG93_RS04470	COG1802	Transcriptional regulator
BJG93_RS04510	COG1846	Transcriptional regulator
BJG93_RS04520	COG0840	transmembrane signaling receptor activity
BJG93_RS04530	COG1802	Transcriptional regulator
BJG93_RS04540	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BJG93_RS04550	COG0473	3-isopropylmalate dehydrogenase activity
BJG93_RS04550	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BJG93_RS04560	COG3384	dioxygenase
BJG93_RS04565	COG2159	amidohydrolase
BJG93_RS04595	COG3618	amidohydrolase
BJG93_RS04600	COG1063	alcohol dehydrogenase
BJG93_RS04645	COG2175	clavaminate synthase activity
BJG93_RS04680	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BJG93_RS04685	COG0477	Major facilitator Superfamily
BJG93_RS04695	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJG93_RS04755	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
BJG93_RS04810	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJG93_RS04855	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BJG93_RS04860	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BJG93_RS04870	COG0625	glutathione transferase activity
BJG93_RS04875	COG0583	DNA-binding transcription factor activity
BJG93_RS04880	COG4106	trans-aconitate 2-methyltransferase activity
BJG93_RS04890	COG2223	nitrite transmembrane transporter activity
BJG93_RS04895	COG0243	molybdopterin cofactor binding
BJG93_RS04900	COG2146	nitrite reductase [NAD(P)H] activity
BJG93_RS04905	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BJG93_RS04920	COG3217	Mosc domain protein beta barrel domain protein
BJG93_RS04920	COG0633	Ferredoxin
BJG93_RS04935	COG3193	protein, possibly involved in utilization of glycolate and propanediol
BJG93_RS04940	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BJG93_RS04945	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BJG93_RS05000	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
BJG93_RS05005	COG0745	RESPONSE REGULATOR receiver
BJG93_RS05015	COG0840	transmembrane signaling receptor activity
BJG93_RS05020	COG2198	Histidine kinase
BJG93_RS05020	COG0643	Histidine kinase
BJG93_RS05025	COG0438	transferase activity, transferring glycosyl groups
BJG93_RS05030	COG0438	transferase activity, transferring glycosyl groups
BJG93_RS05050	COG0489	protein tyrosine kinase activity
BJG93_RS05050	COG3206	protein involved in exopolysaccharide biosynthesis
BJG93_RS05060	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BJG93_RS05070	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BJG93_RS05110	COG0438	transferase activity, transferring glycosyl groups
BJG93_RS05115	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
BJG93_RS05120	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
BJG93_RS05120	COG3264	Mechanosensitive ion channel
BJG93_RS05135	COG0084	hydrolase, TatD family'
BJG93_RS05140	COG1247	-acetyltransferase
BJG93_RS05150	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BJG93_RS05155	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BJG93_RS05180	COG2130	NADP-dependent
BJG93_RS05190	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJG93_RS05205	COG0183	Belongs to the thiolase family
BJG93_RS05210	COG1024	Enoyl-CoA hydratase
BJG93_RS05210	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJG93_RS05215	COG0318	PFAM AMP-dependent synthetase and ligase
BJG93_RS05220	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BJG93_RS05225	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BJG93_RS05230	COG2917	probably involved in intracellular septation
BJG93_RS05240	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BJG93_RS05245	COG0047	phosphoribosylformylglycinamidine synthase activity
BJG93_RS05245	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BJG93_RS05250	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BJG93_RS05255	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BJG93_RS05255	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BJG93_RS05260	COG0166	Belongs to the GPI family
BJG93_RS05265	COG4181	ATPase activity
BJG93_RS05290	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJG93_RS05295	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJG93_RS05315	COG2205	protein histidine kinase activity
BJG93_RS05325	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BJG93_RS05340	COG0745	RESPONSE REGULATOR receiver
BJG93_RS05345	COG5002	protein histidine kinase activity
BJG93_RS05350	COG0745	RESPONSE REGULATOR receiver
BJG93_RS05360	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJG93_RS05370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJG93_RS05380	COG0583	DNA-binding transcription factor activity
BJG93_RS05385	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJG93_RS05390	COG0154	amidase activity
BJG93_RS05400	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJG93_RS05405	COG1116	anion transmembrane transporter activity
BJG93_RS05425	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS05475	COG2198	Histidine kinase
BJG93_RS05475	COG5002	protein histidine kinase activity
BJG93_RS05475	COG0784	Response regulator, receiver
BJG93_RS05515	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BJG93_RS05520	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJG93_RS05555	COG0776	regulation of translation
BJG93_RS05560	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BJG93_RS05565	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BJG93_RS05570	COG0740	serine-type endopeptidase activity
BJG93_RS05575	COG0544	peptidyl-prolyl cis-trans isomerase activity
BJG93_RS05580	COG1929	Belongs to the glycerate kinase type-1 family
BJG93_RS05625	COG0450	alkyl hydroperoxide reductase
BJG93_RS05630	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BJG93_RS05635	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BJG93_RS05640	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BJG93_RS05655	COG1970	mechanosensitive ion channel activity
BJG93_RS05660	COG5002	protein histidine kinase activity
BJG93_RS05670	COG4251	negative regulation of phosphorylation
BJG93_RS05680	COG2982	Protein involved in outer membrane biogenesis
BJG93_RS05685	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BJG93_RS05690	COG0390	transport system, permease component
BJG93_RS05710	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BJG93_RS05715	COG2124	cytochrome p450
BJG93_RS05720	COG0560	Phosphoserine phosphatase
BJG93_RS05725	COG0626	cystathionine gamma-synthase activity
BJG93_RS05735	COG0183	Belongs to the thiolase family
BJG93_RS05740	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJG93_RS05745	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BJG93_RS05750	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BJG93_RS05760	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS05765	COG0183	Belongs to the thiolase family
BJG93_RS05770	COG3243	poly(R)-hydroxyalkanoic acid synthase
BJG93_RS05780	COG0564	pseudouridine synthase activity
BJG93_RS05790	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BJG93_RS05810	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BJG93_RS05810	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BJG93_RS05815	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BJG93_RS05825	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJG93_RS05840	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJG93_RS05845	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BJG93_RS05850	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BJG93_RS05870	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BJG93_RS05875	COG0789	Transcriptional regulator
BJG93_RS05880	COG2814	Major facilitator Superfamily
BJG93_RS05885	COG3228	Belongs to the MtfA family
BJG93_RS05890	COG0254	rRNA binding
BJG93_RS05900	COG0534	Mate efflux family protein
BJG93_RS05910	COG3753	Protein conserved in bacteria
BJG93_RS05915	COG0542	response to heat
BJG93_RS05920	COG1959	2 iron, 2 sulfur cluster binding
BJG93_RS05925	COG2346	COG2346, Truncated hemoglobins
BJG93_RS05930	COG0314	molybdopterin synthase activity
BJG93_RS05935	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BJG93_RS05955	COG0436	Aminotransferase
BJG93_RS05965	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BJG93_RS05970	COG2076	Multidrug Resistance protein
BJG93_RS05975	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BJG93_RS05980	COG0463	Glycosyl transferase, family 2
BJG93_RS05990	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BJG93_RS05990	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BJG93_RS05995	COG0726	polysaccharide deacetylase
BJG93_RS06000	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BJG93_RS06005	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BJG93_RS06010	COG0791	NLP P60 protein
BJG93_RS06015	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS06020	COG0306	phosphate transporter
BJG93_RS06030	COG2085	NADP oxidoreductase coenzyme F420-dependent
BJG93_RS06035	COG1733	regulation of RNA biosynthetic process
BJG93_RS06055	COG0359	binds to the 23S rRNA
BJG93_RS06060	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BJG93_RS06080	COG1595	DNA-templated transcription, initiation
BJG93_RS06085	COG0583	DNA-binding transcription factor activity
BJG93_RS06090	COG3960	tartronate-semialdehyde synthase activity
BJG93_RS06095	COG3622	Belongs to the hyi family
BJG93_RS06100	COG2084	Dehydrogenase
BJG93_RS06105	COG0252	asparaginase activity
BJG93_RS06110	COG5295	Hep Hag repeat protein
BJG93_RS06115	COG0583	DNA-binding transcription factor activity
BJG93_RS06120	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BJG93_RS06125	COG4208	sulfate ABC transporter
BJG93_RS06130	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BJG93_RS06135	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BJG93_RS06140	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BJG93_RS06160	COG1131	(ABC) transporter
BJG93_RS06180	COG0667	Aldo Keto reductase
BJG93_RS06185	COG3530	Putative quorum-sensing-regulated virulence factor
BJG93_RS06205	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BJG93_RS06240	COG1116	anion transmembrane transporter activity
BJG93_RS06245	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJG93_RS06250	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJG93_RS06290	COG4702	Belongs to the UPF0303 family
BJG93_RS06325	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
BJG93_RS06330	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
BJG93_RS06335	COG0167	dihydroorotate dehydrogenase activity
BJG93_RS06340	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJG93_RS06345	COG0765	amino acid transport
BJG93_RS06350	COG0673	inositol 2-dehydrogenase activity
BJG93_RS06385	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BJG93_RS06395	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BJG93_RS06415	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BJG93_RS06430	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BJG93_RS06435	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BJG93_RS06440	COG0557	exoribonuclease II activity
BJG93_RS06455	COG1940	carbohydrate kinase activity
BJG93_RS06475	COG0395	ABC-type sugar transport system, permease component
BJG93_RS06495	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BJG93_RS06500	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJG93_RS06505	COG2909	trisaccharide binding
BJG93_RS06520	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BJG93_RS06525	COG4372	Transposase
BJG93_RS06530	COG0288	reversible hydration of carbon dioxide
BJG93_RS06540	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BJG93_RS06555	COG0058	SHG alpha-glucan phosphorylase activity
BJG93_RS06560	COG2190	(PTS) system
BJG93_RS06565	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
BJG93_RS06585	COG1953	Uracil, thiamine, allantoin
BJG93_RS06605	COG1309	transcriptional regulator
BJG93_RS06625	COG0587	DNA-directed DNA polymerase activity
BJG93_RS06645	COG1538	Outer membrane efflux protein
BJG93_RS06650	COG0628	permease
BJG93_RS06675	COG2205	protein histidine kinase activity
BJG93_RS06675	COG0784	Response regulator, receiver
BJG93_RS06700	COG1295	ribonuclease BN
BJG93_RS06705	COG2814	Major facilitator Superfamily
BJG93_RS06715	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS06730	COG0183	Belongs to the thiolase family
BJG93_RS06735	COG0318	PFAM AMP-dependent synthetase and ligase
BJG93_RS06765	COG1923	regulation of RNA biosynthetic process
BJG93_RS06790	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BJG93_RS06795	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BJG93_RS06800	COG0508	dehydrogenase complex catalyzes the overall conversion of
BJG93_RS06805	COG0567	Dehydrogenase, E1 component
BJG93_RS06810	COG1217	gtp-binding protein TYPA
BJG93_RS06825	COG1566	PFAM secretion protein HlyD family protein
BJG93_RS06830	COG2814	Major facilitator Superfamily
BJG93_RS06835	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BJG93_RS06840	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BJG93_RS06850	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BJG93_RS06855	COG2251	uridine kinase activity
BJG93_RS06855	COG0195	Participates in both transcription termination and antitermination
BJG93_RS06860	COG0779	Required for maturation of 30S ribosomal subunits
BJG93_RS06870	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BJG93_RS06875	COG0436	Aminotransferase
BJG93_RS06880	COG0583	DNA-binding transcription factor activity
BJG93_RS06920	COG2200	EAL domain
BJG93_RS06920	COG2199	diguanylate cyclase activity
BJG93_RS06935	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BJG93_RS06940	COG1074	ATP-dependent DNA helicase activity
BJG93_RS06945	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BJG93_RS06960	COG1522	sequence-specific DNA binding
BJG93_RS06970	COG0668	transmembrane transport
BJG93_RS06980	COG1959	2 iron, 2 sulfur cluster binding
BJG93_RS06990	COG0693	protein deglycase activity
BJG93_RS07000	COG4251	negative regulation of phosphorylation
BJG93_RS07005	COG0004	ammonium transporteR
BJG93_RS07010	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BJG93_RS07040	COG3387	PFAM Glycoside hydrolase 15-related
BJG93_RS07055	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJG93_RS07065	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJG93_RS07075	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BJG93_RS07080	COG2200	EAL domain
BJG93_RS07080	COG2199	diguanylate cyclase activity
BJG93_RS07080	COG2202	Pas domain
BJG93_RS07100	COG2988	succinylglutamate desuccinylase activity
BJG93_RS07105	COG3724	N-succinylarginine dihydrolase activity
BJG93_RS07110	COG1012	belongs to the aldehyde dehydrogenase family
BJG93_RS07125	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BJG93_RS07160	COG1752	Esterase of the alpha-beta hydrolase superfamily
BJG93_RS07180	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJG93_RS07190	COG0840	transmembrane signaling receptor activity
BJG93_RS07195	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJG93_RS07210	COG0840	transmembrane signaling receptor activity
BJG93_RS07220	COG0596	Alpha beta hydrolase
BJG93_RS07225	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BJG93_RS07235	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
BJG93_RS07270	COG1228	amidohydrolase
BJG93_RS07280	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BJG93_RS07290	COG2986	histidine ammonia-lyase
BJG93_RS07305	COG2252	PERMEase
BJG93_RS07330	COG1942	4-Oxalocrotonate Tautomerase
BJG93_RS07350	COG2194	sulfuric ester hydrolase activity
BJG93_RS07355	COG1215	transferase activity, transferring glycosyl groups
BJG93_RS07380	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BJG93_RS07385	COG1215	transferase activity, transferring glycosyl groups
BJG93_RS07395	COG5487	UPF0391 membrane protein
BJG93_RS07415	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BJG93_RS07420	COG0583	DNA-binding transcription factor activity
BJG93_RS07425	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS07430	COG0667	Aldo Keto reductase
BJG93_RS07445	COG0835	chemotaxis
BJG93_RS07445	COG0784	Response regulator, receiver
BJG93_RS07450	COG2814	Major facilitator Superfamily
BJG93_RS07455	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BJG93_RS07455	COG2111	Na H antiporter
BJG93_RS07460	COG1006	Multisubunit Na H antiporter MnhC subunit
BJG93_RS07470	COG1863	multisubunit Na H antiporter MnhE subunit
BJG93_RS07475	COG2212	antiporter activity
BJG93_RS07480	COG1320	monovalent cation:proton antiporter activity
BJG93_RS07500	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BJG93_RS07510	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BJG93_RS07515	COG0697	spore germination
BJG93_RS07535	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BJG93_RS07590	COG0672	)-iron permease
BJG93_RS07595	COG4633	Protein conserved in bacteria
BJG93_RS07605	COG0556	nucleotide-excision repair
BJG93_RS07620	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS07625	COG0667	Aldo Keto reductase
BJG93_RS07630	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BJG93_RS07655	COG1091	dTDP-4-dehydrorhamnose reductase activity
BJG93_RS07685	COG0628	permease
BJG93_RS07710	COG2866	Carboxypeptidase
BJG93_RS07715	COG3022	response to hydroperoxide
BJG93_RS07725	COG0436	Aminotransferase
BJG93_RS07735	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJG93_RS07740	COG1024	Enoyl-CoA hydratase
BJG93_RS07755	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS07760	COG0625	glutathione transferase activity
BJG93_RS07775	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS07780	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS07805	COG1007	ATP synthesis coupled electron transport
BJG93_RS07820	COG0713	ATP synthesis coupled electron transport
BJG93_RS07830	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJG93_RS07835	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BJG93_RS07840	COG1034	ATP synthesis coupled electron transport
BJG93_RS07845	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BJG93_RS07855	COG0649	NAD binding
BJG93_RS07860	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJG93_RS07865	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJG93_RS07870	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJG93_RS07885	COG0149	triose-phosphate isomerase activity
BJG93_RS07890	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BJG93_RS07890	COG0604	alcohol dehydrogenase
BJG93_RS07890	COG4221	oxidoreductase activity
BJG93_RS07890	COG3321	synthase
BJG93_RS07895	COG1185	polyribonucleotide nucleotidyltransferase activity
BJG93_RS07900	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BJG93_RS07905	COG0683	leucine binding
BJG93_RS07915	COG0288	reversible hydration of carbon dioxide
BJG93_RS07920	COG0659	secondary active sulfate transmembrane transporter activity
BJG93_RS07925	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BJG93_RS07930	COG1183	phosphatidylcholine synthase activity
BJG93_RS07935	COG0688	phosphatidylethanolamine metabolic process
BJG93_RS07940	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BJG93_RS07945	COG0440	acetolactate synthase activity
BJG93_RS07950	COG0028	Belongs to the TPP enzyme family
BJG93_RS07980	COG0438	transferase activity, transferring glycosyl groups
BJG93_RS07990	COG1309	transcriptional regulator
BJG93_RS08000	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS08005	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BJG93_RS08020	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BJG93_RS08030	COG2076	Multidrug Resistance protein
BJG93_RS08035	COG0745	RESPONSE REGULATOR receiver
BJG93_RS08040	COG2205	protein histidine kinase activity
BJG93_RS08045	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
BJG93_RS08050	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
BJG93_RS08055	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
BJG93_RS08080	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS08085	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BJG93_RS08090	COG0217	transcriptional regulatory protein
BJG93_RS08095	COG0151	Belongs to the GarS family
BJG93_RS08100	COG0408	coproporphyrinogen oxidase activity
BJG93_RS08105	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BJG93_RS08110	COG0799	negative regulation of ribosome biogenesis
BJG93_RS08115	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BJG93_RS08120	COG0424	maF-like protein
BJG93_RS08125	COG1530	ribonuclease E activity
BJG93_RS08130	COG0583	DNA-binding transcription factor activity
BJG93_RS08135	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJG93_RS08140	COG3842	ATPase activity
BJG93_RS08150	COG1176	ABC-type spermidine putrescine transport system, permease component I
BJG93_RS08155	COG1177	transmembrane transport
BJG93_RS08160	COG0604	alcohol dehydrogenase
BJG93_RS08170	COG1454	alcohol dehydrogenase
BJG93_RS08175	COG0583	DNA-binding transcription factor activity
BJG93_RS08180	COG1301	dicarboxylic acid transport
BJG93_RS08230	COG1956	GAF domain-containing protein
BJG93_RS08300	COG1215	transferase activity, transferring glycosyl groups
BJG93_RS08305	COG1132	(ABC) transporter
BJG93_RS08310	COG0463	Glycosyl transferase, family 2
BJG93_RS08320	COG1054	Belongs to the UPF0176 family
BJG93_RS08325	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BJG93_RS08330	COG0513	Belongs to the DEAD box helicase family
BJG93_RS08335	COG1012	belongs to the aldehyde dehydrogenase family
BJG93_RS08355	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BJG93_RS08365	COG1674	ftsk spoiiie
BJG93_RS08365	COG1674	ftsk spoiiie
BJG93_RS08370	COG2706	6-phosphogluconolactonase activity
BJG93_RS08380	COG3387	PFAM Glycoside hydrolase 15-related
BJG93_RS08390	COG1309	transcriptional regulator
BJG93_RS08395	COG2878	Part of a membrane complex involved in electron transport
BJG93_RS08400	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BJG93_RS08430	COG3135	benzoate transporter
BJG93_RS08435	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BJG93_RS08470	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BJG93_RS08475	COG1360	Flagellar Motor Protein
BJG93_RS08490	COG0662	Cupin 2, conserved barrel domain protein
BJG93_RS08495	COG0456	acetyltransferase
BJG93_RS08515	COG3161	chorismate lyase activity
BJG93_RS08520	COG0326	Molecular chaperone. Has ATPase activity
BJG93_RS08525	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJG93_RS08535	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJG93_RS08545	COG0384	phenazine biosynthesis protein PhzF
BJG93_RS08555	COG2059	Chromate
BJG93_RS08575	COG0488	(ABC) transporter
BJG93_RS08580	COG1773	rubredoxin
BJG93_RS08610	COG0625	glutathione transferase activity
BJG93_RS08630	COG3727	T/G mismatch-specific endonuclease activity
BJG93_RS08635	COG1881	PFAM PEBP family protein
BJG93_RS08640	COG2814	Major facilitator Superfamily
BJG93_RS08645	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
BJG93_RS08655	COG2204	response regulator
BJG93_RS08675	COG2204	response regulator
BJG93_RS08690	COG1116	anion transmembrane transporter activity
BJG93_RS08695	COG1176	ABC-type spermidine putrescine transport system, permease component I
BJG93_RS08725	COG1741	Belongs to the pirin family
BJG93_RS08730	COG4215	(ABC) transporter
BJG93_RS08755	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BJG93_RS08755	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BJG93_RS08765	COG2827	Endonuclease containing a URI domain
BJG93_RS08775	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BJG93_RS08790	COG2271	Major facilitator Superfamily
BJG93_RS08800	COG3795	YCII-related domain
BJG93_RS08850	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS08865	COG0181	hydroxymethylbilane synthase activity
BJG93_RS08870	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BJG93_RS08880	COG0165	Argininosuccinate lyase
BJG93_RS08890	COG0477	Major facilitator Superfamily
BJG93_RS08905	COG0859	PFAM glycosyl transferase family 9
BJG93_RS08915	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BJG93_RS08920	COG2894	cell division
BJG93_RS08925	COG0850	regulation of cytokinetic process
BJG93_RS08935	COG0024	Methionine aminopeptidase
BJG93_RS08950	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BJG93_RS08955	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BJG93_RS08970	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BJG93_RS08975	COG1674	ftsk spoiiie
BJG93_RS08980	COG0492	ferredoxin-NADP+ reductase activity
BJG93_RS08985	COG2840	Smr protein MutS2
BJG93_RS09000	COG3842	ATPase activity
BJG93_RS09005	COG0395	ABC-type sugar transport system, permease component
BJG93_RS09010	COG1175	transmembrane transport
BJG93_RS09020	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BJG93_RS09030	COG0837	glucose binding
BJG93_RS09030	COG1737	Transcriptional regulator
BJG93_RS09035	COG3781	membrane
BJG93_RS09050	COG0717	Belongs to the dCTP deaminase family
BJG93_RS09060	COG0489	protein tyrosine kinase activity
BJG93_RS09070	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BJG93_RS09070	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BJG93_RS09090	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BJG93_RS09095	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BJG93_RS09100	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
BJG93_RS09105	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
BJG93_RS09115	COG1492	cobalamin metabolic process
BJG93_RS09135	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BJG93_RS09145	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BJG93_RS09150	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BJG93_RS09155	COG1120	ATPase activity
BJG93_RS09160	COG4139	cobalamin transport
BJG93_RS09165	COG4206	TonB-dependent receptor
BJG93_RS09195	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BJG93_RS09200	COG0583	DNA-binding transcription factor activity
BJG93_RS09210	COG4654	Cytochrome c, class I
BJG93_RS09225	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BJG93_RS09245	COG1648	precorrin-2 dehydrogenase activity
BJG93_RS09245	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BJG93_RS09250	COG2895	sulfate adenylyltransferase (ATP) activity
BJG93_RS09260	COG0175	sulfate reduction
BJG93_RS09270	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BJG93_RS09275	COG0583	DNA-binding transcription factor activity
BJG93_RS09295	COG0673	inositol 2-dehydrogenase activity
BJG93_RS09305	COG1879	ABC-type sugar transport system periplasmic component
BJG93_RS09310	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJG93_RS09325	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BJG93_RS09345	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BJG93_RS09370	COG1129	ABC transporter
BJG93_RS09390	COG0829	nickel cation binding
BJG93_RS09395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJG93_RS09400	COG0831	urea catabolic process
BJG93_RS09405	COG0832	Belongs to the urease beta subunit family
BJG93_RS09415	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
BJG93_RS09420	COG0830	nickel cation binding
BJG93_RS09425	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BJG93_RS09460	COG2378	regulation of single-species biofilm formation
BJG93_RS09470	COG2207	Transcriptional regulator
BJG93_RS09475	COG0300	oxidoreductase activity
BJG93_RS09485	COG1560	Kdo2-lipid A biosynthetic process
BJG93_RS09505	COG2226	methyltransferase
BJG93_RS09540	COG2267	carboxylic ester hydrolase activity
BJG93_RS09585	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BJG93_RS09595	COG0840	transmembrane signaling receptor activity
BJG93_RS09600	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BJG93_RS09610	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BJG93_RS09635	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BJG93_RS09650	COG1216	Glycosyl transferase, family 2
BJG93_RS09650	COG0438	transferase activity, transferring glycosyl groups
BJG93_RS09675	COG0588	phosphoglycerate mutase activity
BJG93_RS09730	COG0463	Glycosyl transferase, family 2
BJG93_RS09760	COG0546	phosphoglycolate phosphatase activity
BJG93_RS09760	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BJG93_RS09770	COG0438	transferase activity, transferring glycosyl groups
BJG93_RS09800	COG0662	Cupin 2, conserved barrel domain protein
BJG93_RS09800	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
BJG93_RS09825	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BJG93_RS09830	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BJG93_RS09845	COG0540	Belongs to the ATCase OTCase family
BJG93_RS09850	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BJG93_RS09855	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BJG93_RS09860	COG1678	Uncharacterized ACR, COG1678
BJG93_RS09870	COG1773	rubredoxin
BJG93_RS09885	COG0529	Catalyzes the synthesis of activated sulfate
BJG93_RS09890	COG0459	protein refolding
BJG93_RS09895	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BJG93_RS09920	COG1596	polysaccharide export
BJG93_RS09940	COG2271	Major facilitator Superfamily
BJG93_RS09945	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJG93_RS09950	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BJG93_RS09955	COG0583	DNA-binding transcription factor activity
BJG93_RS09975	COG0730	response to heat
BJG93_RS09985	COG2823	Periplasmic or secreted lipoprotein
BJG93_RS10015	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BJG93_RS10065	COG4122	O-methyltransferase activity
BJG93_RS10115	COG0492	ferredoxin-NADP+ reductase activity
BJG93_RS10125	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BJG93_RS10130	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BJG93_RS10150	COG2814	Major facilitator Superfamily
BJG93_RS10185	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS10190	COG0450	alkyl hydroperoxide reductase
BJG93_RS10235	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BJG93_RS10245	COG4221	oxidoreductase activity
BJG93_RS10250	COG0824	Thioesterase
BJG93_RS10270	COG0823	Involved in the tonB-independent uptake of proteins
BJG93_RS10305	COG0586	Pfam SNARE associated Golgi protein
BJG93_RS10310	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BJG93_RS10315	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BJG93_RS10320	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BJG93_RS10330	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BJG93_RS10340	COG0617	tRNA 3'-terminal CCA addition
BJG93_RS10350	COG1428	Deoxynucleoside kinase
BJG93_RS10355	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BJG93_RS10365	COG0484	heat shock protein binding
BJG93_RS10370	COG0443	Heat shock 70 kDa protein
BJG93_RS10375	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BJG93_RS10385	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BJG93_RS10390	COG1420	regulation of RNA biosynthetic process
BJG93_RS10395	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BJG93_RS10400	COG0497	DNA recombination
BJG93_RS10405	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BJG93_RS10415	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BJG93_RS10420	COG0312	modulator of DNA gyrase
BJG93_RS10425	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BJG93_RS10440	COG2096	Adenosyltransferase
BJG93_RS10445	COG0277	FAD linked oxidase domain protein
BJG93_RS10450	COG0277	FAD linked oxidase domain protein
BJG93_RS10455	COG0277	FAD linked oxidase domain protein
BJG93_RS10460	COG0247	lactate metabolic process
BJG93_RS10475	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BJG93_RS10480	COG0783	Belongs to the Dps family
BJG93_RS10485	COG0753	catalase activity
BJG93_RS10495	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BJG93_RS10500	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BJG93_RS10505	COG0343	queuine tRNA-ribosyltransferase activity
BJG93_RS10510	COG1862	Preprotein translocase
BJG93_RS10515	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BJG93_RS10520	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BJG93_RS10530	COG2353	YceI-like domain
BJG93_RS10550	COG2995	paraquat-inducible protein a
BJG93_RS10555	COG3008	intermembrane lipid transfer
BJG93_RS10600	COG0482	sulfurtransferase activity
BJG93_RS10605	COG0069	glutamate synthase activity
BJG93_RS10610	COG0752	glycyl-tRNA synthetase alpha subunit
BJG93_RS10615	COG0751	glycine-tRNA ligase activity
BJG93_RS10620	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BJG93_RS10625	COG0204	Acyl-transferase
BJG93_RS10645	COG0765	amino acid transport
BJG93_RS10650	COG0765	amino acid transport
BJG93_RS10670	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BJG93_RS10675	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BJG93_RS10680	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BJG93_RS10685	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BJG93_RS10695	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BJG93_RS10700	COG5265	(ABC) transporter
BJG93_RS10725	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BJG93_RS10730	COG1024	Enoyl-CoA hydratase
BJG93_RS10735	COG0183	Belongs to the thiolase family
BJG93_RS10740	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJG93_RS10740	COG1024	Enoyl-CoA hydratase
BJG93_RS10745	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS10755	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BJG93_RS10760	COG0494	nUDIX hydrolase
BJG93_RS10765	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BJG93_RS10785	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BJG93_RS10800	COG2226	methyltransferase
BJG93_RS10820	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BJG93_RS10830	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BJG93_RS10830	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BJG93_RS10840	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BJG93_RS10880	COG5002	protein histidine kinase activity
BJG93_RS10880	COG0784	Response regulator, receiver
BJG93_RS10880	COG2205	protein histidine kinase activity
BJG93_RS10890	COG2197	response regulator
BJG93_RS10900	COG2197	response regulator
BJG93_RS10915	COG0840	transmembrane signaling receptor activity
BJG93_RS10925	COG0629	single-stranded DNA binding
BJG93_RS10930	COG2814	Major facilitator Superfamily
BJG93_RS10965	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BJG93_RS10995	COG1137	ATPase activity
BJG93_RS11000	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BJG93_RS11005	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BJG93_RS11015	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BJG93_RS11020	COG1660	Displays ATPase and GTPase activities
BJG93_RS11030	COG1194	a g-specific adenine glycosylase
BJG93_RS11035	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BJG93_RS11045	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
BJG93_RS11050	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BJG93_RS11060	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BJG93_RS11065	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BJG93_RS11070	COG0193	aminoacyl-tRNA hydrolase activity
BJG93_RS11080	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BJG93_RS11105	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BJG93_RS11110	COG0742	ribosomal rna small subunit methyltransferase
BJG93_RS11120	COG0625	glutathione transferase activity
BJG93_RS11130	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BJG93_RS11140	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BJG93_RS11155	COG1294	oxidase, subunit
BJG93_RS11165	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJG93_RS11165	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BJG93_RS11170	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BJG93_RS11175	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BJG93_RS11180	COG2188	Transcriptional regulator
BJG93_RS11185	COG0456	acetyltransferase
BJG93_RS11185	COG1846	Transcriptional regulator
BJG93_RS11200	COG1999	signal sequence binding
BJG93_RS11205	COG0109	protoheme IX farnesyltransferase activity
BJG93_RS11210	COG1612	heme a metabolic process
BJG93_RS11240	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
BJG93_RS11245	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BJG93_RS11260	COG2226	methyltransferase
BJG93_RS11270	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BJG93_RS11275	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BJG93_RS11280	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BJG93_RS11285	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
BJG93_RS11295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BJG93_RS11300	COG0588	phosphoglycerate mutase activity
BJG93_RS11305	COG0793	Belongs to the peptidase S41A family
BJG93_RS11315	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BJG93_RS11320	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJG93_RS11330	COG0189	ligase activity
BJG93_RS11340	COG0004	ammonium transporteR
BJG93_RS11350	COG2960	long-chain fatty acid transporting porin activity
BJG93_RS11355	COG0606	chelatase, subunit chli
BJG93_RS11375	COG4191	Histidine kinase
BJG93_RS11380	COG1301	dicarboxylic acid transport
BJG93_RS11385	COG0584	glycerophosphoryl diester phosphodiesterase
BJG93_RS11395	COG0321	lipoyl(octanoyl) transferase activity
BJG93_RS11405	COG0583	DNA-binding transcription factor activity
BJG93_RS11410	COG2921	Belongs to the UPF0250 family
BJG93_RS11420	COG1686	Belongs to the peptidase S11 family
BJG93_RS11450	COG1127	ABC transporter
BJG93_RS11455	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BJG93_RS11465	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BJG93_RS11475	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BJG93_RS11490	COG1024	Enoyl-CoA hydratase
BJG93_RS11530	COG1410	methionine synthase
BJG93_RS11530	COG0646	methionine synthase
BJG93_RS11545	COG0018	arginyl-trna synthetase
BJG93_RS11555	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BJG93_RS11570	COG0747	negative chemotaxis
BJG93_RS11590	COG0789	Transcriptional regulator
BJG93_RS11595	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
BJG93_RS11600	COG0183	Belongs to the thiolase family
BJG93_RS11610	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS11615	COG3012	SEC-C Motif Domain Protein
BJG93_RS11630	COG0156	8-amino-7-oxononanoate synthase activity
BJG93_RS11635	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BJG93_RS11640	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BJG93_RS11650	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BJG93_RS11675	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BJG93_RS11690	COG0596	Alpha beta hydrolase
BJG93_RS11700	COG1703	isobutyryl-CoA mutase activity
BJG93_RS11700	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJG93_RS11700	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJG93_RS11705	COG0583	DNA-binding transcription factor activity
BJG93_RS11725	COG1609	Transcriptional regulator
BJG93_RS11765	COG2200	EAL domain
BJG93_RS11765	COG2199	diguanylate cyclase activity
BJG93_RS11770	COG0025	NhaP-type Na H and K H
BJG93_RS11775	COG2233	PERMEase
BJG93_RS11780	COG5001	Diguanylate cyclase
BJG93_RS11780	COG2203	Gaf domain
BJG93_RS11780	COG3706	GGDEF domain
BJG93_RS11780	COG4251	negative regulation of phosphorylation
BJG93_RS11785	COG4638	Rieske (2fe-2S)
BJG93_RS11790	COG3485	protocatechuate 3,4-dioxygenase
BJG93_RS11820	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
BJG93_RS11825	COG0732	type I restriction modification DNA specificity domain
BJG93_RS11830	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BJG93_RS11845	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BJG93_RS11920	COG0537	adenosine 5'-monophosphoramidase activity
BJG93_RS11945	COG0582	viral genome integration into host DNA
BJG93_RS11955	COG4654	Cytochrome c, class I
BJG93_RS11965	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BJG93_RS11970	COG0792	nuclease activity
BJG93_RS11985	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BJG93_RS11995	COG1522	sequence-specific DNA binding
BJG93_RS12005	COG2916	Histone family protein nucleoid-structuring protein H-NS
BJG93_RS12035	COG0412	Dienelactone hydrolase
BJG93_RS12050	COG0579	oxidoreductase
BJG93_RS12055	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BJG93_RS12065	COG3568	Endonuclease Exonuclease Phosphatase
BJG93_RS12075	COG1609	Transcriptional regulator
BJG93_RS12080	COG1879	ABC-type sugar transport system periplasmic component
BJG93_RS12085	COG1129	ABC transporter
BJG93_RS12090	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJG93_RS12095	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJG93_RS12115	COG0531	amino acid
BJG93_RS12150	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BJG93_RS12155	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BJG93_RS12165	COG2814	Major facilitator Superfamily
BJG93_RS12175	COG0667	Aldo Keto reductase
BJG93_RS12195	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BJG93_RS12200	COG1560	Kdo2-lipid A biosynthetic process
BJG93_RS12205	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BJG93_RS12215	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BJG93_RS12225	COG0523	cobalamin synthesis protein
BJG93_RS12235	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BJG93_RS12240	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BJG93_RS12245	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
BJG93_RS12255	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BJG93_RS12265	COG1309	transcriptional regulator
BJG93_RS12270	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BJG93_RS12280	COG2814	Major facilitator Superfamily
BJG93_RS12290	COG0708	Exodeoxyribonuclease III
BJG93_RS12295	COG2326	polyphosphate kinase activity
BJG93_RS12300	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BJG93_RS12305	COG0154	amidase activity
BJG93_RS12310	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BJG93_RS12315	COG1077	Cell shape determining protein MreB Mrl
BJG93_RS12330	COG0768	penicillin binding
BJG93_RS12335	COG0772	Belongs to the SEDS family
BJG93_RS12350	COG0720	synthase
BJG93_RS12355	COG0602	queuosine metabolic process
BJG93_RS12360	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BJG93_RS12370	COG2204	response regulator
BJG93_RS12375	COG5000	phosphorelay sensor kinase activity
BJG93_RS12390	COG0501	Belongs to the peptidase M48B family
BJG93_RS12400	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BJG93_RS12405	COG0242	peptide deformylase activity
BJG93_RS12410	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BJG93_RS12410	COG0758	DNA mediated transformation
BJG93_RS12425	COG0583	DNA-binding transcription factor activity
BJG93_RS12430	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
BJG93_RS12435	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BJG93_RS12505	COG2856	Zn peptidase
BJG93_RS12535	COG0436	Aminotransferase
BJG93_RS12540	COG0513	Belongs to the DEAD box helicase family
BJG93_RS12550	COG0789	Transcriptional regulator
BJG93_RS12560	COG4302	ethanolamine ammonia-lyase activity
BJG93_RS12565	COG4303	Ethanolamine ammonia lyase large subunit
BJG93_RS12605	COG0592	DNA-directed DNA polymerase activity
BJG93_RS12610	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BJG93_RS12615	COG0594	ribonuclease P activity
BJG93_RS12620	COG0706	membrane insertase activity
BJG93_RS12630	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BJG93_RS12650	COG0537	adenosine 5'-monophosphoramidase activity
BJG93_RS12680	COG1012	belongs to the aldehyde dehydrogenase family
BJG93_RS12700	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BJG93_RS12700	COG2169	Transcriptional regulator
BJG93_RS12720	COG2814	Major facilitator Superfamily
BJG93_RS12725	COG1846	Transcriptional regulator
BJG93_RS12785	COG1459	type II secretion system
BJG93_RS12805	COG0523	cobalamin synthesis protein
BJG93_RS12815	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
BJG93_RS12815	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BJG93_RS12825	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
BJG93_RS12835	COG0505	Belongs to the CarA family
BJG93_RS12840	COG1902	pentaerythritol trinitrate reductase activity
BJG93_RS12865	COG2154	pterin-4-alpha-carbinolamine dehydratase
BJG93_RS12870	COG1522	sequence-specific DNA binding
BJG93_RS12880	COG0583	DNA-binding transcription factor activity
BJG93_RS12890	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BJG93_RS12945	COG0445	tRNA wobble uridine modification
BJG93_RS12950	COG0357	Ribosomal RNA small subunit methyltransferase G
BJG93_RS12955	COG1192	Involved in chromosome partitioning
BJG93_RS12960	COG1475	DNA binding
BJG93_RS12970	COG0356	it plays a direct role in the translocation of protons across the membrane
BJG93_RS12980	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BJG93_RS12985	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BJG93_RS12990	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BJG93_RS12995	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BJG93_RS13000	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BJG93_RS13005	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BJG93_RS13010	COG0318	PFAM AMP-dependent synthetase and ligase
BJG93_RS13020	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BJG93_RS13030	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BJG93_RS13035	COG2855	membrane
BJG93_RS13040	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BJG93_RS13040	COG0506	proline dehydrogenase activity
BJG93_RS13040	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BJG93_RS13050	COG0028	Belongs to the TPP enzyme family
BJG93_RS13055	COG1760	l-serine dehydratase
BJG93_RS13065	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BJG93_RS13065	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BJG93_RS13070	COG0509	glycine decarboxylation via glycine cleavage system
BJG93_RS13075	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BJG93_RS13085	COG0673	inositol 2-dehydrogenase activity
BJG93_RS13090	COG0210	DNA helicase
BJG93_RS13095	COG3245	cytochrome
BJG93_RS13135	COG0642	Histidine kinase
BJG93_RS13150	COG1086	Polysaccharide biosynthesis protein
BJG93_RS13155	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BJG93_RS13160	COG1083	cytidylyl-transferase
BJG93_RS13165	COG2089	acid synthase
BJG93_RS13170	COG2226	methyltransferase
BJG93_RS13205	COG0667	Aldo Keto reductase
BJG93_RS13210	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BJG93_RS13220	COG2818	Glycosylase
BJG93_RS13245	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BJG93_RS13255	COG0438	transferase activity, transferring glycosyl groups
BJG93_RS13275	COG1360	Flagellar Motor Protein
BJG93_RS13280	COG2201	protein-glutamate methylesterase activity
BJG93_RS13285	COG2198	Histidine kinase
BJG93_RS13285	COG0643	Histidine kinase
BJG93_RS13295	COG0840	transmembrane signaling receptor activity
BJG93_RS13305	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
BJG93_RS13310	COG2201	protein-glutamate methylesterase activity
BJG93_RS13315	COG0745	RESPONSE REGULATOR receiver
BJG93_RS13320	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
BJG93_RS13345	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BJG93_RS13365	COG1191	sigma factor activity
BJG93_RS13385	COG2747	anti-sigma28 factor FlgM
BJG93_RS13395	COG1815	bacterial-type flagellum-dependent cell motility
BJG93_RS13400	COG1558	bacterial-type flagellum-dependent cell motility
BJG93_RS13405	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BJG93_RS13430	COG1706	bacterial-type flagellum-dependent cell motility
BJG93_RS13440	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
BJG93_RS13445	COG1256	bacterial-type flagellum assembly
BJG93_RS13460	COG1987	bacterial-type flagellum assembly
BJG93_RS13475	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BJG93_RS13485	COG1580	Controls the rotational direction of flagella during chemotaxis
BJG93_RS13525	COG1516	flagellar protein fliS
BJG93_RS13540	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BJG93_RS13550	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS13555	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
BJG93_RS13560	COG1950	PFAM Membrane protein of
BJG93_RS13565	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BJG93_RS13570	COG0747	negative chemotaxis
BJG93_RS13575	COG0747	negative chemotaxis
BJG93_RS13580	COG0601	transmembrane transport
BJG93_RS13585	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJG93_RS13590	COG0444	Belongs to the ABC transporter superfamily
BJG93_RS13595	COG4608	Belongs to the ABC transporter superfamily
BJG93_RS13615	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BJG93_RS13620	COG1984	allophanate hydrolase subunit 2
BJG93_RS13625	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BJG93_RS13635	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BJG93_RS13655	COG0617	tRNA 3'-terminal CCA addition
BJG93_RS13670	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS13680	COG0037	tRNA processing
BJG93_RS13685	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BJG93_RS13690	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BJG93_RS13695	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BJG93_RS13715	COG1858	cytochrome C peroxidase
BJG93_RS13735	COG1414	Transcriptional regulator
BJG93_RS13755	COG2084	Dehydrogenase
BJG93_RS13760	COG1280	lysine exporter protein (LysE YggA)
BJG93_RS13780	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BJG93_RS13790	COG1881	PFAM PEBP family protein
BJG93_RS13795	COG2197	response regulator
BJG93_RS13800	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BJG93_RS13810	COG2814	Major facilitator Superfamily
BJG93_RS13815	COG0281	malic enzyme
BJG93_RS13815	COG0280	phosphate acetyltransferase
BJG93_RS13855	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BJG93_RS13860	COG2151	metal-sulfur cluster biosynthetic enzyme
BJG93_RS13865	COG3396	Phenylacetate-CoA oxygenase
BJG93_RS13870	COG3460	Phenylacetate-CoA oxygenase
BJG93_RS13875	COG3396	Phenylacetate-CoA oxygenase
BJG93_RS13880	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
BJG93_RS13930	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BJG93_RS13940	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BJG93_RS13950	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BJG93_RS13955	COG0081	regulation of translation
BJG93_RS13960	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BJG93_RS13965	COG0222	ribosome binding
BJG93_RS13970	COG0085	RNA polymerase activity
BJG93_RS13975	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BJG93_RS13980	COG0514	ATP-dependent DNA helicase (RecQ)
BJG93_RS13985	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BJG93_RS13990	COG0049	tRNA binding
BJG93_RS13995	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BJG93_RS14000	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BJG93_RS14005	COG0051	transcription antitermination factor activity, RNA binding
BJG93_RS14010	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BJG93_RS14015	COG0088	Forms part of the polypeptide exit tunnel
BJG93_RS14020	COG0089	rRNA binding
BJG93_RS14025	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BJG93_RS14030	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BJG93_RS14040	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BJG93_RS14045	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BJG93_RS14050	COG0255	Belongs to the universal ribosomal protein uL29 family
BJG93_RS14055	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BJG93_RS14060	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BJG93_RS14065	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BJG93_RS14070	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BJG93_RS14075	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BJG93_RS14080	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BJG93_RS14085	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BJG93_RS14090	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BJG93_RS14100	COG1841	ribosomal large subunit assembly
BJG93_RS14105	COG0200	Binds to the 23S rRNA
BJG93_RS14110	COG0201	protein transport
BJG93_RS14125	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BJG93_RS14130	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BJG93_RS14135	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BJG93_RS14140	COG0202	RNA polymerase activity
BJG93_RS14145	COG0203	ribosomal protein L17
BJG93_RS14155	COG4232	protein-disulfide reductase activity
BJG93_RS14165	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BJG93_RS14175	COG1333	cytochrome c biogenesis protein
BJG93_RS14180	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BJG93_RS14185	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BJG93_RS14190	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
BJG93_RS14205	COG1965	Belongs to the frataxin family
BJG93_RS14240	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BJG93_RS14245	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BJG93_RS14265	COG0067	glutamate synthase
BJG93_RS14265	COG0070	glutamate synthase
BJG93_RS14265	COG0069	glutamate synthase activity
BJG93_RS14275	COG2365	Tyrosine phosphatase family
BJG93_RS14305	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BJG93_RS14325	COG4178	(ABC) transporter
BJG93_RS14350	COG1127	ABC transporter
BJG93_RS14355	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BJG93_RS14360	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BJG93_RS14380	COG1131	(ABC) transporter
BJG93_RS14385	COG0842	Transport permease protein
BJG93_RS14395	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BJG93_RS14415	COG0131	Imidazoleglycerol-phosphate dehydratase
BJG93_RS14425	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BJG93_RS14430	COG0107	imidazoleglycerol-phosphate synthase activity
BJG93_RS14440	COG0140	phosphoribosyl-ATP diphosphatase activity
BJG93_RS14455	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BJG93_RS14460	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BJG93_RS14465	COG0805	protein transport
BJG93_RS14470	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJG93_RS14475	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BJG93_RS14480	COG0723	plastoquinol--plastocyanin reductase activity
BJG93_RS14485	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BJG93_RS14490	COG2857	Cytochrome c1
BJG93_RS14495	COG0625	glutathione transferase activity
BJG93_RS14500	COG2969	positive regulation of protein catabolic process
BJG93_RS14555	COG0477	Major facilitator Superfamily
BJG93_RS14560	COG0443	Heat shock 70 kDa protein
BJG93_RS14565	COG1278	Cold shock
BJG93_RS14575	COG0531	amino acid
BJG93_RS14580	COG3384	dioxygenase
BJG93_RS14590	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BJG93_RS14595	COG2890	protein-(glutamine-N5) methyltransferase activity
BJG93_RS14600	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BJG93_RS14605	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BJG93_RS14635	COG0488	(ABC) transporter
BJG93_RS14640	COG3842	ATPase activity
BJG93_RS14645	COG0395	ABC-type sugar transport system, permease component
BJG93_RS14665	COG0012	GTP binding
BJG93_RS14670	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJG93_RS14675	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BJG93_RS14685	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BJG93_RS14690	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BJG93_RS14700	COG0134	indole-3-glycerol-phosphate synthase activity
BJG93_RS14705	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BJG93_RS14770	COG5295	Hep Hag repeat protein
BJG93_RS14775	COG2885	chlorophyll binding
BJG93_RS14850	COG0546	phosphoglycolate phosphatase activity
BJG93_RS14855	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BJG93_RS14860	COG2967	ApaG domain
BJG93_RS14865	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BJG93_RS14875	COG2050	protein possibly involved in aromatic compounds catabolism
BJG93_RS14880	COG1024	Enoyl-CoA hydratase
BJG93_RS14890	COG1024	Enoyl-CoA hydratase
BJG93_RS14920	COG1473	amidohydrolase
BJG93_RS14925	COG0243	molybdopterin cofactor binding
BJG93_RS14930	COG0318	PFAM AMP-dependent synthetase and ligase
BJG93_RS14935	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJG93_RS14940	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
BJG93_RS14945	COG2001	Belongs to the MraZ family
BJG93_RS14950	COG0275	rRNA processing
BJG93_RS14955	COG3116	cell division
BJG93_RS14965	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BJG93_RS14970	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BJG93_RS14975	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BJG93_RS14980	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BJG93_RS14990	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BJG93_RS14995	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BJG93_RS15000	COG1181	Belongs to the D-alanine--D-alanine ligase family
BJG93_RS15005	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BJG93_RS15025	COG0678	peroxiredoxin activity
BJG93_RS15030	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
BJG93_RS15040	COG0653	protein targeting
BJG93_RS15055	COG0494	nUDIX hydrolase
BJG93_RS15060	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
BJG93_RS15065	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
BJG93_RS15090	COG4536	flavin adenine dinucleotide binding
BJG93_RS15100	COG0142	geranyltranstransferase activity
BJG93_RS15105	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BJG93_RS15115	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BJG93_RS15120	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BJG93_RS15130	COG0494	nUDIX hydrolase
BJG93_RS15135	COG0442	prolyl-tRNA aminoacylation
BJG93_RS15140	COG2095	MarC family integral membrane protein
BJG93_RS15145	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
BJG93_RS15150	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BJG93_RS15155	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BJG93_RS15180	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BJG93_RS15195	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJG93_RS15200	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BJG93_RS15210	COG2264	protein methyltransferase activity
BJG93_RS15215	COG0439	Biotin carboxylase
BJG93_RS15220	COG0511	ligase activity, forming carbon-carbon bonds
BJG93_RS15225	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BJG93_RS15230	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BJG93_RS15240	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BJG93_RS15245	COG3150	esterase
BJG93_RS15250	COG0557	exoribonuclease II activity
BJG93_RS15255	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BJG93_RS15260	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BJG93_RS15265	COG1414	Transcriptional regulator
BJG93_RS15270	COG3734	2-keto-3-deoxy-galactonokinase
BJG93_RS15275	COG0800	Aldolase
BJG93_RS15280	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS15290	COG1129	ABC transporter
BJG93_RS15315	COG0284	orotidine-5'-phosphate decarboxylase activity
BJG93_RS15325	COG1546	Belongs to the CinA family
BJG93_RS15330	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BJG93_RS15350	COG2732	(Barnase) inhibitor
BJG93_RS15355	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BJG93_RS15365	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BJG93_RS15370	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BJG93_RS15375	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BJG93_RS15390	COG4266	Belongs to the allantoicase family
BJG93_RS15395	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
BJG93_RS15400	COG0735	belongs to the Fur family
BJG93_RS15405	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BJG93_RS15410	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BJG93_RS15425	COG0495	leucyl-tRNA aminoacylation
BJG93_RS15440	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BJG93_RS15445	COG1981	membrane
BJG93_RS15460	COG0800	Aldolase
BJG93_RS15470	COG3265	gluconokinase activity
BJG93_RS15480	COG0583	DNA-binding transcription factor activity
BJG93_RS15485	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BJG93_RS15495	COG0765	amino acid transport
BJG93_RS15500	COG0765	amino acid transport
BJG93_RS15505	COG1126	abc transporter atp-binding protein
BJG93_RS15510	COG0121	glutamine amidotransferase
BJG93_RS15515	COG0418	dihydroorotase activity
BJG93_RS15535	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BJG93_RS15540	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BJG93_RS15545	COG0316	Belongs to the HesB IscA family
BJG93_RS15550	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BJG93_RS15560	COG1490	D-aminoacyl-tRNA deacylase activity
BJG93_RS15565	COG0406	alpha-ribazole phosphatase activity
BJG93_RS15575	COG2255	four-way junction helicase activity
BJG93_RS15580	COG0632	four-way junction helicase activity
BJG93_RS15585	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BJG93_RS15595	COG0138	bifunctional purine biosynthesis protein purh
BJG93_RS15600	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
BJG93_RS15605	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BJG93_RS15610	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJG93_RS15615	COG0006	proline dipeptidase activity
BJG93_RS15620	COG0625	glutathione transferase activity
BJG93_RS15625	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BJG93_RS15635	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BJG93_RS15640	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BJG93_RS15645	COG1702	phosphate starvation-inducible protein PhoH
BJG93_RS15650	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BJG93_RS15655	COG1396	sequence-specific DNA binding
BJG93_RS15665	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJG93_RS15670	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BJG93_RS15720	COG0513	Belongs to the DEAD box helicase family
BJG93_RS15725	COG1272	protein, Hemolysin III
BJG93_RS15755	COG4948	Mandelate Racemase Muconate Lactonizing
BJG93_RS15760	COG2186	Transcriptional regulator
BJG93_RS15765	COG2814	Major facilitator Superfamily
BJG93_RS15770	COG1846	Transcriptional regulator
BJG93_RS15785	COG4770	biotin carboxylase activity
BJG93_RS15790	COG3665	Urea carboxylase-associated protein
BJG93_RS15800	COG3842	ATPase activity
BJG93_RS15820	COG0477	Major facilitator Superfamily
BJG93_RS15835	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BJG93_RS15840	COG2137	regulation of response to DNA damage stimulus
BJG93_RS15850	COG0045	succinate-CoA ligase (ADP-forming) activity
BJG93_RS15855	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BJG93_RS15860	COG0861	Integral membrane protein TerC family
BJG93_RS15865	COG4969	Belongs to the N-Me-Phe pilin family
BJG93_RS15880	COG0315	cyclic pyranopterin monophosphate synthase activity
BJG93_RS15895	COG0429	hydrolase of the alpha beta-hydrolase fold
BJG93_RS15905	COG0859	PFAM glycosyl transferase family 9
BJG93_RS15930	COG0126	phosphoglycerate kinase activity
BJG93_RS15935	COG0469	pyruvate kinase activity
BJG93_RS15945	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BJG93_RS15950	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BJG93_RS15955	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BJG93_RS15960	COG0009	L-threonylcarbamoyladenylate synthase
BJG93_RS15985	COG0642	Histidine kinase
BJG93_RS15990	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJG93_RS16010	COG4977	sequence-specific DNA binding
BJG93_RS16015	COG1335	isochorismatase
BJG93_RS16025	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJG93_RS16030	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJG93_RS16040	COG2233	PERMEase
BJG93_RS16045	COG1070	Carbohydrate kinase
BJG93_RS16055	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
BJG93_RS16060	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BJG93_RS16065	COG1121	(ABC) transporter
BJG93_RS16070	COG0803	Belongs to the bacterial solute-binding protein 9 family
BJG93_RS16085	COG1175	transmembrane transport
BJG93_RS16100	COG3842	ATPase activity
BJG93_RS16110	COG2390	Transcriptional regulator
BJG93_RS16115	COG1070	Carbohydrate kinase
BJG93_RS16120	COG0246	Mannitol dehydrogenase
BJG93_RS16130	COG1879	ABC-type sugar transport system periplasmic component
BJG93_RS16140	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJG93_RS16145	COG1063	alcohol dehydrogenase
BJG93_RS16155	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS16175	COG3483	tryptophan 2,3-dioxygenase activity
BJG93_RS16185	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BJG93_RS16190	COG1522	sequence-specific DNA binding
BJG93_RS16195	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BJG93_RS16200	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BJG93_RS16210	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BJG93_RS16215	COG0259	pyridoxamine-phosphate oxidase activity
BJG93_RS16220	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BJG93_RS16230	COG1741	Belongs to the pirin family
BJG93_RS16240	COG0860	N-Acetylmuramoyl-L-alanine amidase
BJG93_RS16245	COG0802	atpase or kinase
BJG93_RS16250	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BJG93_RS16255	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BJG93_RS16260	COG4974	Belongs to the 'phage' integrase family
BJG93_RS16265	COG0318	PFAM AMP-dependent synthetase and ligase
BJG93_RS16270	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BJG93_RS16275	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BJG93_RS16280	COG1666	GTP binding
BJG93_RS16285	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BJG93_RS16290	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BJG93_RS16300	COG0268	Binds directly to 16S ribosomal RNA
BJG93_RS16305	COG0728	peptidoglycan biosynthetic process
BJG93_RS16320	COG0563	adenylate kinase activity
BJG93_RS16325	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
BJG93_RS16330	COG2835	tetraacyldisaccharide 4'-kinase activity
BJG93_RS16335	COG1663	tetraacyldisaccharide 4'-kinase activity
BJG93_RS16340	COG1570	exodeoxyribonuclease VII activity
BJG93_RS16360	COG0740	serine-type endopeptidase activity
BJG93_RS16365	COG1595	DNA-templated transcription, initiation
BJG93_RS16390	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJG93_RS16395	COG2188	Transcriptional regulator
BJG93_RS16400	COG0656	L-ascorbic acid biosynthetic process
BJG93_RS16415	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJG93_RS16420	COG0601	transmembrane transport
BJG93_RS16425	COG0747	negative chemotaxis
BJG93_RS16635	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BJG93_RS16955	COG2814	Major facilitator Superfamily
BJG93_RS17210	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BJG93_RS17495	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BJG93_RS18350	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BJG93_RS18430	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJG93_RS18455	COG0477	Major facilitator Superfamily
BJG93_RS18515	COG0673	inositol 2-dehydrogenase activity
BJG93_RS18555	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BJG93_RS18755	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BJG93_RS19320	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BJG93_RS19380	COG0504	CTP synthase activity
BJG93_RS19395	COG0148	phosphopyruvate hydratase activity
BJG93_RS19540	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BJG93_RS19570	COG2183	response to ionizing radiation
BJG93_RS19575	COG2183	response to ionizing radiation
BJG93_RS19685	COG0215	cysteine-tRNA ligase activity
BJG93_RS19950	COG1187	pseudouridine synthase activity
BJG93_RS20155	COG1953	Uracil, thiamine, allantoin
BJG93_RS20220	COG3845	ABC transporter
BJG93_RS20590	COG1053	succinate dehydrogenase
BJG93_RS20595	COG1053	succinate dehydrogenase
BJG93_RS20840	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BJG93_RS20845	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BJG93_RS20895	COG2070	2-Nitropropane dioxygenase
BJG93_RS21230	COG2223	nitrite transmembrane transporter activity
BJG93_RS21360	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
BJG93_RS21405	COG3206	protein involved in exopolysaccharide biosynthesis
BJG93_RS21405	COG0489	protein tyrosine kinase activity
BJG93_RS21500	COG0084	hydrolase, TatD family'
BJG93_RS21570	COG1024	Enoyl-CoA hydratase
BJG93_RS21770	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJG93_RS21875	COG5002	protein histidine kinase activity
BJG93_RS21875	COG2198	Histidine kinase
BJG93_RS21875	COG0784	Response regulator, receiver
BJG93_RS22020	COG2205	protein histidine kinase activity
BJG93_RS22025	COG0450	alkyl hydroperoxide reductase
BJG93_RS22235	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BJG93_RS22295	COG0534	Mate efflux family protein
BJG93_RS22450	COG5295	Hep Hag repeat protein
BJG93_RS22480	COG4208	sulfate ABC transporter
BJG93_RS22505	COG1131	(ABC) transporter
BJG93_RS22555	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJG93_RS22930	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
BJG93_RS22935	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
BJG93_RS22975	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BJG93_RS22975	COG0493	'glutamate synthase
BJG93_RS23005	COG0587	DNA-directed DNA polymerase activity
BJG93_RS23010	COG0587	DNA-directed DNA polymerase activity
BJG93_RS23150	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BJG93_RS23160	COG0508	dehydrogenase complex catalyzes the overall conversion of
BJG93_RS23235	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BJG93_RS23365	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BJG93_RS23635	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJG93_RS23675	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BJG93_RS23750	COG2986	histidine ammonia-lyase
BJG93_RS23835	COG3118	belongs to the thioredoxin family
BJG93_RS23835	COG0457	Tetratricopeptide repeat
BJG93_RS24575	COG1012	belongs to the aldehyde dehydrogenase family
BJG93_RS25050	COG2814	Major facilitator Superfamily
BJG93_RS25570	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BJG93_RS25580	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
BJG93_RS25695	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BJG93_RS26245	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BJG93_RS26255	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BJG93_RS26745	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BJG93_RS26745	COG0512	Glutamine amidotransferase of anthranilate synthase
BJG93_RS26800	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BJG93_RS27180	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BJG93_RS27180	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BJG93_RS27315	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BJG93_RS27355	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BJG93_RS27555	COG0793	Belongs to the peptidase S41A family
BJG93_RS27795	COG0747	negative chemotaxis
BJG93_RS27955	COG1703	isobutyryl-CoA mutase activity
BJG93_RS27955	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJG93_RS27955	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJG93_RS28290	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BJG93_RS28915	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BJG93_RS29000	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BJG93_RS29140	COG1028	Short-chain dehydrogenase reductase Sdr
BJG93_RS29275	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BJG93_RS29600	COG0534	Mate efflux family protein
BJG93_RS29605	COG0534	Mate efflux family protein
BJG93_RS29790	COG0481	GTPase activity
BJG93_RS29930	COG1132	(ABC) transporter
BJG93_RS30035	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BJG93_RS30175	COG1082	Xylose isomerase domain protein TIM barrel
BJG93_RS30235	COG0525	valine-tRNA ligase activity
BJG93_RS30240	COG0525	valine-tRNA ligase activity
BJG93_RS30445	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS30465	COG0583	DNA-binding transcription factor activity
BJG93_RS30475	COG3511	phospholipase C
BJG93_RS30735	COG0477	Major facilitator Superfamily
BJG93_RS30785	COG1546	Belongs to the CinA family
BJG93_RS30785	COG1058	Belongs to the CinA family
BJG93_RS30825	COG0402	S-adenosylhomocysteine deaminase activity
BJG93_RS30940	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BJG93_RS31080	COG2833	Protein of unknown function (DUF455)
BJG93_RS31210	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BJG93_RS31220	COG0477	Major facilitator Superfamily
BJG93_RS31475	COG0386	Belongs to the glutathione peroxidase family
BJG93_RS31735	COG1619	proteins homologs of microcin C7 resistance protein MccF
BJG93_RS32045	COG2719	SpoVR family
BJG93_RS32085	COG2205	protein histidine kinase activity
BJG93_RS32115	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BJG93_RS32115	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BJG93_RS32445	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BJG93_RS32520	COG0196	riboflavin kinase activity
BJG93_RS32575	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BJG93_RS32695	COG1446	asparaginase
BJG93_RS32930	COG0436	Aminotransferase
BJG93_RS32980	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BJG93_RS33555	COG1401	restriction endodeoxyribonuclease activity
BJG93_RS33830	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BJG93_RS34000	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BJG93_RS34100	COG3383	formate dehydrogenase (NAD+) activity
BJG93_RS34160	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BJG93_RS34165	COG0287	Prephenate dehydrogenase
BJG93_RS34195	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BJG93_RS34260	COG1960	acyl-CoA dehydrogenase activity
BJG93_RS34580	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJG93_RS34740	COG2226	methyltransferase
BJG93_RS34780	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity