locus-tag class description FX988_RS00005 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FX988_RS00005 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FX988_RS00010 PF00850 Histone deacetylase domain FX988_RS00020 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS00020 PF01627 Hpt domain FX988_RS00020 PF00989 PAS fold FX988_RS00020 PF00072 Response regulator receiver domain FX988_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS00020 PF00497 Bacterial extracellular solute-binding proteins, family 3 FX988_RS00025 PF01494 FAD binding domain FX988_RS00040 PF03358 NADPH-dependent FMN reductase FX988_RS00045 PF01235 Sodium:alanine symporter family FX988_RS00080 PF01926 50S ribosome-binding GTPase FX988_RS00080 PF06071 Protein of unknown function (DUF933) FX988_RS00085 PF01195 Peptidyl-tRNA hydrolase FX988_RS00090 PF14693 Ribosomal protein TL5, C-terminal domain FX988_RS00090 PF01386 Ribosomal L25p family FX988_RS00095 PF00924 Mechanosensitive ion channel FX988_RS00100 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FX988_RS00100 PF14572 Phosphoribosyl synthetase-associated domain FX988_RS00110 PF00288 GHMP kinases N terminal domain FX988_RS00110 PF08544 GHMP kinases C terminal FX988_RS00115 PF03550 Outer membrane lipoprotein LolB FX988_RS00120 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FX988_RS00120 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FX988_RS00120 PF01488 Shikimate / quinate 5-dehydrogenase FX988_RS00125 PF03462 PCRF domain FX988_RS00125 PF00472 RF-1 domain FX988_RS00130 PF13847 Methyltransferase domain FX988_RS00130 PF17827 PrmC N-terminal domain FX988_RS00135 PF11849 Domain of unknown function (DUF3369) FX988_RS00145 PF13369 Transglutaminase-like superfamily FX988_RS00155 PF04055 Radical SAM superfamily FX988_RS00155 PF06968 Biotin and Thiamin Synthesis associated domain FX988_RS00160 PF00155 Aminotransferase class I and II FX988_RS00165 PF08241 Methyltransferase domain FX988_RS00180 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS00180 PF00107 Zinc-binding dehydrogenase FX988_RS00190 PF00578 AhpC/TSA family FX988_RS00195 PF17946 RecC C-terminal domain FX988_RS00200 PF13361 UvrD-like helicase C-terminal domain FX988_RS00200 PF00580 UvrD/REP helicase N-terminal domain FX988_RS00200 PF12705 PD-(D/E)XK nuclease superfamily FX988_RS00205 PF13538 UvrD-like helicase C-terminal domain FX988_RS00225 PF00266 Aminotransferase class-V FX988_RS00260 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS00270 PF00072 Response regulator receiver domain FX988_RS00270 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS00275 PF08546 Ketopantoate reductase PanE/ApbA C terminal FX988_RS00275 PF02558 Ketopantoate reductase PanE/ApbA FX988_RS00285 PF02463 RecF/RecN/SMC N terminal domain FX988_RS00285 PF06470 SMC proteins Flexible Hinge Domain FX988_RS00290 PF04354 ZipA, C-terminal FtsZ-binding domain FX988_RS00295 PF00533 BRCA1 C Terminus (BRCT) domain FX988_RS00295 PF12826 Helix-hairpin-helix motif FX988_RS00295 PF03120 NAD-dependent DNA ligase OB-fold domain FX988_RS00295 PF01653 NAD-dependent DNA ligase adenylation domain FX988_RS00295 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FX988_RS00310 PF00753 Metallo-beta-lactamase superfamily FX988_RS00310 PF03772 Competence protein FX988_RS00315 PF00664 ABC transporter transmembrane region FX988_RS00315 PF00005 ABC transporter FX988_RS00320 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FX988_RS00325 PF03966 Trm112p-like protein FX988_RS00330 PF02348 Cytidylyltransferase FX988_RS00340 PF00291 Pyridoxal-phosphate dependent enzyme FX988_RS00345 PF17158 Membrane-associated sensor, integral membrane domain FX988_RS00345 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS00365 PF03466 LysR substrate binding domain FX988_RS00365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS00375 PF00899 ThiF family FX988_RS00380 PF01050 Mannose-6-phosphate isomerase FX988_RS00380 PF00483 Nucleotidyl transferase FX988_RS00385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FX988_RS00385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FX988_RS00385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FX988_RS00385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FX988_RS00390 PF00285 Citrate synthase, C-terminal domain FX988_RS00395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FX988_RS00400 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FX988_RS00405 PF00890 FAD binding domain FX988_RS00405 PF02910 Fumarate reductase flavoprotein C-term FX988_RS00410 PF13085 2Fe-2S iron-sulfur cluster binding domain FX988_RS00415 PF02779 Transketolase, pyrimidine binding domain FX988_RS00415 PF16078 2-oxoglutarate dehydrogenase N-terminus FX988_RS00415 PF16870 2-oxoglutarate dehydrogenase C-terminal FX988_RS00415 PF00676 Dehydrogenase E1 component FX988_RS00420 PF02817 e3 binding domain FX988_RS00420 PF00364 Biotin-requiring enzyme FX988_RS00420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FX988_RS00425 PF00549 CoA-ligase FX988_RS00425 PF08442 ATP-grasp domain FX988_RS00430 PF02629 CoA binding domain FX988_RS00430 PF00549 CoA-ligase FX988_RS00435 PF00326 Prolyl oligopeptidase family FX988_RS00440 PF07995 Glucose / Sorbosone dehydrogenase FX988_RS00450 PF00296 Luciferase-like monooxygenase FX988_RS00455 PF03575 Peptidase family S51 FX988_RS00460 PF00593 TonB dependent receptor FX988_RS00460 PF07715 TonB-dependent Receptor Plug Domain FX988_RS00470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS00470 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS00470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS00475 PF01636 Phosphotransferase enzyme family FX988_RS00480 PF00107 Zinc-binding dehydrogenase FX988_RS00480 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS00505 PF00326 Prolyl oligopeptidase family FX988_RS00505 PF07676 WD40-like Beta Propeller Repeat FX988_RS00525 PF00756 Putative esterase FX988_RS00530 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS00530 PF00107 Zinc-binding dehydrogenase FX988_RS00555 PF04055 Radical SAM superfamily FX988_RS00555 PF18693 TRAM domain FX988_RS00555 PF00919 Uncharacterized protein family UPF0004 FX988_RS00585 PF00106 short chain dehydrogenase FX988_RS00605 PF13360 PQQ-like domain FX988_RS00605 PF01011 PQQ enzyme repeat FX988_RS00630 PF00005 ABC transporter FX988_RS00645 PF00593 TonB dependent receptor FX988_RS00645 PF07715 TonB-dependent Receptor Plug Domain FX988_RS00660 PF00005 ABC transporter FX988_RS00680 PF00196 Bacterial regulatory proteins, luxR family FX988_RS00680 PF00072 Response regulator receiver domain FX988_RS00685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS00685 PF00989 PAS fold FX988_RS00685 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS00695 PF12801 4Fe-4S binding domain FX988_RS00695 PF04205 FMN-binding domain FX988_RS00700 PF00171 Aldehyde dehydrogenase family FX988_RS00705 PF13460 NAD(P)H-binding FX988_RS00710 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FX988_RS00720 PF03466 LysR substrate binding domain FX988_RS00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS00725 PF00152 tRNA synthetases class II (D, K and N) FX988_RS00725 PF01336 OB-fold nucleic acid binding domain FX988_RS00740 PF00291 Pyridoxal-phosphate dependent enzyme FX988_RS00745 PF13404 AsnC-type helix-turn-helix domain FX988_RS00745 PF01037 Lrp/AsnC ligand binding domain FX988_RS00750 PF03553 Na+/H+ antiporter family FX988_RS00765 PF00245 Alkaline phosphatase FX988_RS00770 PF00245 Alkaline phosphatase FX988_RS00775 PF00149 Calcineurin-like phosphoesterase FX988_RS00780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FX988_RS00785 PF01406 tRNA synthetases class I (C) catalytic domain FX988_RS00785 PF09190 DALR domain FX988_RS00795 PF01476 LysM domain FX988_RS00795 PF01464 Transglycosylase SLT domain FX988_RS00800 PF00753 Metallo-beta-lactamase superfamily FX988_RS00800 PF16123 Hydroxyacylglutathione hydrolase C-terminus FX988_RS00805 PF08241 Methyltransferase domain FX988_RS00810 PF08264 Anticodon-binding domain of tRNA FX988_RS00810 PF09334 tRNA synthetases class I (M) FX988_RS00810 PF01588 Putative tRNA binding domain FX988_RS00815 PF10609 NUBPL iron-transfer P-loop NTPase FX988_RS00820 PF00692 dUTPase FX988_RS00825 PF12833 Helix-turn-helix domain FX988_RS00825 PF12852 Cupin FX988_RS00885 PF01695 IstB-like ATP binding protein FX988_RS00895 PF00589 Phage integrase family FX988_RS00895 PF02899 Phage integrase, N-terminal SAM-like domain FX988_RS00945 PF00722 Glycosyl hydrolases family 16 FX988_RS00950 PF02449 Beta-galactosidase FX988_RS00950 PF17992 Agarase CBM like domain FX988_RS00955 PF00884 Sulfatase FX988_RS00960 PF00722 Glycosyl hydrolases family 16 FX988_RS00965 PF04820 Tryptophan halogenase FX988_RS00990 PF00884 Sulfatase FX988_RS00990 PF16385 Domain of unknown function FX988_RS00995 PF00593 TonB dependent receptor FX988_RS00995 PF07715 TonB-dependent Receptor Plug Domain FX988_RS01025 PF18206 Porphyranase catalytic subdomain 1 FX988_RS01030 PF00884 Sulfatase FX988_RS01030 PF16347 Domain of unknown function (DUF4976) FX988_RS01035 PF00884 Sulfatase FX988_RS01045 PF00171 Aldehyde dehydrogenase family FX988_RS01055 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS01055 PF00107 Zinc-binding dehydrogenase FX988_RS01060 PF13378 Enolase C-terminal domain-like FX988_RS01060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FX988_RS01085 PF09308 LuxQ, periplasmic FX988_RS01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS01085 PF00072 Response regulator receiver domain FX988_RS01085 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS01110 PF01554 MatE FX988_RS01115 PF00994 Probable molybdopterin binding domain FX988_RS01115 PF03454 MoeA C-terminal region (domain IV) FX988_RS01115 PF03453 MoeA N-terminal region (domain I and II) FX988_RS01120 PF00899 ThiF family FX988_RS01130 PF04324 BFD-like [2Fe-2S] binding domain FX988_RS01130 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS01130 PF13806 Rieske-like [2Fe-2S] domain FX988_RS01130 PF18267 Rubredoxin NAD+ reductase C-terminal domain FX988_RS01130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FX988_RS01130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FX988_RS01135 PF13806 Rieske-like [2Fe-2S] domain FX988_RS01140 PF04324 BFD-like [2Fe-2S] binding domain FX988_RS01140 PF01568 Molydopterin dinucleotide binding domain FX988_RS01140 PF00384 Molybdopterin oxidoreductase FX988_RS01140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FX988_RS01145 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FX988_RS01145 PF14824 Sirohaem biosynthesis protein central FX988_RS01145 PF10414 Sirohaem synthase dimerisation region FX988_RS01150 PF00591 Glycosyl transferase family, a/b domain FX988_RS01150 PF02885 Glycosyl transferase family, helical bundle domain FX988_RS01155 PF00196 Bacterial regulatory proteins, luxR family FX988_RS01155 PF00072 Response regulator receiver domain FX988_RS01160 PF00005 ABC transporter FX988_RS01165 PF02525 Flavodoxin-like fold FX988_RS01170 PF00255 Glutathione peroxidase FX988_RS01180 PF01132 Elongation factor P (EF-P) OB domain FX988_RS01180 PF08207 Elongation factor P (EF-P) KOW-like domain FX988_RS01180 PF09285 Elongation factor P, C-terminal FX988_RS01190 PF00360 Phytochrome region FX988_RS01190 PF01590 GAF domain FX988_RS01190 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS01190 PF00563 EAL domain FX988_RS01210 PF03781 Sulfatase-modifying factor enzyme 1 FX988_RS01215 PF10017 Histidine-specific methyltransferase, SAM-dependent FX988_RS01225 PF04299 Putative FMN-binding domain FX988_RS01235 PF01979 Amidohydrolase family FX988_RS01240 PF00576 HIUase/Transthyretin family FX988_RS01255 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FX988_RS01255 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FX988_RS01260 PF01799 [2Fe-2S] binding domain FX988_RS01260 PF00111 2Fe-2S iron-sulfur cluster binding domain FX988_RS01260 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FX988_RS01260 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FX988_RS01265 PF00440 Bacterial regulatory proteins, tetR family FX988_RS01265 PF08362 YcdC-like protein, C-terminal region FX988_RS01275 PF00860 Permease family FX988_RS01280 PF00962 Adenosine/AMP deaminase FX988_RS01285 PF07690 Major Facilitator Superfamily FX988_RS01290 PF03793 PASTA domain FX988_RS01290 PF00069 Protein kinase domain FX988_RS01295 PF00005 ABC transporter FX988_RS01300 PF00528 Binding-protein-dependent transport system inner membrane component FX988_RS01305 PF00005 ABC transporter FX988_RS01330 PF01169 Uncharacterized protein family UPF0016 FX988_RS01345 PF00005 ABC transporter FX988_RS01345 PF02687 FtsX-like permease family FX988_RS01345 PF12704 MacB-like periplasmic core domain FX988_RS01350 PF00005 ABC transporter FX988_RS01355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FX988_RS01370 PF07715 TonB-dependent Receptor Plug Domain FX988_RS01370 PF00593 TonB dependent receptor FX988_RS01380 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS01380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FX988_RS01385 PF01258 Prokaryotic dksA/traR C4-type zinc finger FX988_RS01390 PF00999 Sodium/hydrogen exchanger family FX988_RS01405 PF00529 HlyD membrane-fusion protein of T1SS FX988_RS01405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FX988_RS01410 PF00873 AcrB/AcrD/AcrF family FX988_RS01415 PF00962 Adenosine/AMP deaminase FX988_RS01420 PF13180 PDZ domain FX988_RS01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS01435 PF07694 5TMR of 5TMR-LYT FX988_RS01435 PF06580 Histidine kinase FX988_RS01440 PF00072 Response regulator receiver domain FX988_RS01440 PF04397 LytTr DNA-binding domain FX988_RS01450 PF08007 Cupin superfamily protein FX988_RS01455 PF00211 Adenylate and Guanylate cyclase catalytic domain FX988_RS01460 PF00206 Lyase FX988_RS01460 PF08328 Adenylosuccinate lyase C-terminal FX988_RS01465 PF04356 Protein of unknown function (DUF489) FX988_RS01475 PF00849 RNA pseudouridylate synthase FX988_RS01480 PF03971 Monomeric isocitrate dehydrogenase FX988_RS01485 PF00313 'Cold-shock' DNA-binding domain FX988_RS01490 PF02617 ATP-dependent Clp protease adaptor protein ClpS FX988_RS01495 PF00004 ATPase family associated with various cellular activities (AAA) FX988_RS01495 PF10431 C-terminal, D2-small domain, of ClpB protein FX988_RS01495 PF02861 Clp amino terminal domain, pathogenicity island component FX988_RS01495 PF17871 AAA lid domain FX988_RS01495 PF07724 AAA domain (Cdc48 subfamily) FX988_RS01500 PF01176 Translation initiation factor 1A / IF-1 FX988_RS01505 PF04377 Arginine-tRNA-protein transferase, C terminus FX988_RS01505 PF04376 Arginine-tRNA-protein transferase, N terminus FX988_RS01510 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FX988_RS01515 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS01520 PF04217 Protein of unknown function, DUF412 FX988_RS01525 PF10263 SprT-like family FX988_RS01525 PF17283 SprT-like zinc ribbon domain FX988_RS01530 PF01343 Peptidase family S49 FX988_RS01540 PF00075 RNase H FX988_RS01545 PF00929 Exonuclease FX988_RS01570 PF01595 Cyclin M transmembrane N-terminal domain FX988_RS01570 PF00571 CBS domain FX988_RS01575 PF00005 ABC transporter FX988_RS01580 PF12704 MacB-like periplasmic core domain FX988_RS01580 PF02687 FtsX-like permease family FX988_RS01585 PF00375 Sodium:dicarboxylate symporter family FX988_RS01595 PF04996 Succinylarginine dihydrolase FX988_RS01600 PF01131 DNA topoisomerase FX988_RS01600 PF01751 Toprim domain FX988_RS01600 PF01396 Topoisomerase DNA binding C4 zinc finger FX988_RS01600 PF08272 Topoisomerase I zinc-ribbon-like FX988_RS01605 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FX988_RS01640 PF02811 PHP domain FX988_RS01640 PF00929 Exonuclease FX988_RS01640 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FX988_RS01640 PF07733 Bacterial DNA polymerase III alpha NTPase domain FX988_RS01640 PF14579 Helix-hairpin-helix motif FX988_RS01640 PF11490 DNA polymerase III polC-type N-terminus II FX988_RS01645 PF00756 Putative esterase FX988_RS01650 PF02311 AraC-like ligand binding domain FX988_RS01650 PF12833 Helix-turn-helix domain FX988_RS01655 PF07690 Major Facilitator Superfamily FX988_RS01660 PF00171 Aldehyde dehydrogenase family FX988_RS01665 PF01433 Peptidase family M1 domain FX988_RS01665 PF11838 ERAP1-like C-terminal domain FX988_RS01670 PF00501 AMP-binding enzyme FX988_RS01670 PF13193 AMP-binding enzyme C-terminal domain FX988_RS01680 PF00561 alpha/beta hydrolase fold FX988_RS01685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FX988_RS01685 PF00378 Enoyl-CoA hydratase/isomerase FX988_RS01685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FX988_RS01690 PF02803 Thiolase, C-terminal domain FX988_RS01690 PF00108 Thiolase, N-terminal domain FX988_RS01695 PF12806 Acetyl-CoA dehydrogenase C-terminal like FX988_RS01695 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS01695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS01695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS01700 PF00561 alpha/beta hydrolase fold FX988_RS01705 PF08448 PAS fold FX988_RS01705 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS01725 PF01979 Amidohydrolase family FX988_RS01730 PF00860 Permease family FX988_RS01735 PF00962 Adenosine/AMP deaminase FX988_RS01740 PF00581 Rhodanese-like domain FX988_RS01755 PF00171 Aldehyde dehydrogenase family FX988_RS01755 PF01619 Proline dehydrogenase FX988_RS01755 PF14850 DNA-binding domain of Proline dehydrogenase FX988_RS01755 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FX988_RS01760 PF01037 Lrp/AsnC ligand binding domain FX988_RS01765 PF01113 Dihydrodipicolinate reductase, N-terminus FX988_RS01765 PF05173 Dihydrodipicolinate reductase, C-terminus FX988_RS01770 PF00117 Glutamine amidotransferase class-I FX988_RS01770 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FX988_RS01775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FX988_RS01775 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FX988_RS01775 PF02142 MGS-like domain FX988_RS01780 PF01272 Transcription elongation factor, GreA/GreB, C-term FX988_RS01780 PF03449 Transcription elongation factor, N-terminal FX988_RS01795 PF00795 Carbon-nitrogen hydrolase FX988_RS01800 PF03471 Transporter associated domain FX988_RS01800 PF00571 CBS domain FX988_RS01805 PF02130 Uncharacterized protein family UPF0054 FX988_RS01810 PF02562 PhoH-like protein FX988_RS01815 PF04055 Radical SAM superfamily FX988_RS01815 PF00919 Uncharacterized protein family UPF0004 FX988_RS01815 PF01938 TRAM domain FX988_RS01830 PF03466 LysR substrate binding domain FX988_RS01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS01840 PF04241 Protein of unknown function (DUF423) FX988_RS01845 PF01728 FtsJ-like methyltransferase FX988_RS01845 PF18125 RlmM ferredoxin-like domain FX988_RS01850 PF03925 SeqA protein C-terminal domain FX988_RS01850 PF17206 SeqA protein N-terminal domain FX988_RS01855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FX988_RS01855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FX988_RS01855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FX988_RS01855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FX988_RS01860 PF00343 Carbohydrate phosphorylase FX988_RS01865 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS01865 PF00563 EAL domain FX988_RS01865 PF13185 GAF domain FX988_RS01870 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FX988_RS01875 PF01906 Putative heavy-metal-binding FX988_RS01885 PF02557 D-alanyl-D-alanine carboxypeptidase FX988_RS01890 PF07687 Peptidase dimerisation domain FX988_RS01890 PF01546 Peptidase family M20/M25/M40 FX988_RS01895 PF03960 ArsC family FX988_RS01910 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS01910 PF00072 Response regulator receiver domain FX988_RS01920 PF00686 Starch binding domain FX988_RS01920 PF00128 Alpha amylase, catalytic domain FX988_RS01925 PF00356 Bacterial regulatory proteins, lacI family FX988_RS01930 PF00749 tRNA synthetases class I (E and Q), catalytic domain FX988_RS01930 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FX988_RS01935 PF00106 short chain dehydrogenase FX988_RS01940 PF12262 Bacterial virulence factor lipase N-terminal FX988_RS01945 PF01343 Peptidase family S49 FX988_RS01945 PF08496 Peptidase family S49 N-terminal FX988_RS01960 PF00875 DNA photolyase FX988_RS01960 PF03441 FAD binding domain of DNA photolyase FX988_RS01965 PF01784 NIF3 (NGG1p interacting factor 3) FX988_RS01975 PF00255 Glutathione peroxidase FX988_RS01980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FX988_RS01980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FX988_RS01995 PF08411 Exonuclease C-terminal FX988_RS01995 PF00929 Exonuclease FX988_RS02005 PF11898 Domain of unknown function (DUF3418) FX988_RS02005 PF04408 Helicase associated domain (HA2) FX988_RS02005 PF00271 Helicase conserved C-terminal domain FX988_RS02005 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FX988_RS02005 PF00270 DEAD/DEAH box helicase FX988_RS02015 PF10672 S-adenosylmethionine-dependent methyltransferase FX988_RS02015 PF17785 PUA-like domain FX988_RS02020 PF00109 Beta-ketoacyl synthase, N-terminal domain FX988_RS02020 PF08659 KR domain FX988_RS02020 PF00550 Phosphopantetheine attachment site FX988_RS02020 PF14765 Polyketide synthase dehydratase FX988_RS02020 PF16197 Ketoacyl-synthetase C-terminal extension FX988_RS02020 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS02020 PF00698 Acyl transferase domain FX988_RS02020 PF02801 Beta-ketoacyl synthase, C-terminal domain FX988_RS02035 PF00128 Alpha amylase, catalytic domain FX988_RS02055 PF06463 Molybdenum Cofactor Synthesis C FX988_RS02055 PF04055 Radical SAM superfamily FX988_RS02060 PF12804 MobA-like NTP transferase domain FX988_RS02065 PF00994 Probable molybdopterin binding domain FX988_RS02070 PF01967 MoaC family FX988_RS02075 PF02597 ThiS family FX988_RS02080 PF02391 MoaE protein FX988_RS02090 PF00528 Binding-protein-dependent transport system inner membrane component FX988_RS02100 PF01475 Ferric uptake regulator family FX988_RS02105 PF00258 Flavodoxin FX988_RS02115 PF12697 Alpha/beta hydrolase family FX988_RS02120 PF00816 H-NS histone family FX988_RS02130 PF01012 Electron transfer flavoprotein domain FX988_RS02135 PF01012 Electron transfer flavoprotein domain FX988_RS02135 PF00766 Electron transfer flavoprotein FAD-binding domain FX988_RS02140 PF08532 Beta-galactosidase trimerisation domain FX988_RS02140 PF08533 Beta-galactosidase C-terminal domain FX988_RS02140 PF02449 Beta-galactosidase FX988_RS02145 PF00128 Alpha amylase, catalytic domain FX988_RS02145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FX988_RS02145 PF02806 Alpha amylase, C-terminal all-beta domain FX988_RS02150 PF01965 DJ-1/PfpI family FX988_RS02150 PF12833 Helix-turn-helix domain FX988_RS02155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS02155 PF12806 Acetyl-CoA dehydrogenase C-terminal like FX988_RS02155 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS02155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS02160 PF00107 Zinc-binding dehydrogenase FX988_RS02160 PF16884 N-terminal domain of oxidoreductase FX988_RS02175 PF07027 Protein of unknown function (DUF1318) FX988_RS02180 PF13617 YnbE-like lipoprotein FX988_RS02185 PF11739 Dicarboxylate transport FX988_RS02190 PF00270 DEAD/DEAH box helicase FX988_RS02190 PF00271 Helicase conserved C-terminal domain FX988_RS02195 PF00575 S1 RNA binding domain FX988_RS02195 PF10150 Ribonuclease E/G family FX988_RS02195 PF12111 Polyribonucleotide phosphorylase C terminal FX988_RS02200 PF00849 RNA pseudouridylate synthase FX988_RS02200 PF01479 S4 domain FX988_RS02205 PF16363 GDP-mannose 4,6 dehydratase FX988_RS02210 PF00483 Nucleotidyl transferase FX988_RS02215 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FX988_RS02220 PF04321 RmlD substrate binding domain FX988_RS02225 PF02545 Maf-like protein FX988_RS02230 PF02620 Large ribosomal RNA subunit accumulation protein YceD FX988_RS02235 PF01783 Ribosomal L32p protein family FX988_RS02240 PF02504 Fatty acid synthesis protein FX988_RS02245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FX988_RS02245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FX988_RS02250 PF00698 Acyl transferase domain FX988_RS02260 PF00550 Phosphopantetheine attachment site FX988_RS02265 PF02801 Beta-ketoacyl synthase, C-terminal domain FX988_RS02265 PF00109 Beta-ketoacyl synthase, N-terminal domain FX988_RS02270 PF01063 Amino-transferase class IV FX988_RS02275 PF02618 YceG-like family FX988_RS02280 PF02223 Thymidylate kinase FX988_RS02285 PF09115 DNA polymerase III, delta subunit, C terminal FX988_RS02290 PF01026 TatD related DNase FX988_RS02300 PF00128 Alpha amylase, catalytic domain FX988_RS02300 PF11941 Domain of unknown function (DUF3459) FX988_RS02305 PF13360 PQQ-like domain FX988_RS02315 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FX988_RS02315 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FX988_RS02320 PF08534 Redoxin FX988_RS02325 PF13520 Amino acid permease FX988_RS02330 PF04143 Sulphur transport FX988_RS02340 PF01022 Bacterial regulatory protein, arsR family FX988_RS02345 PF00672 HAMP domain FX988_RS02345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FX988_RS02345 PF00072 Response regulator receiver domain FX988_RS02345 PF01627 Hpt domain FX988_RS02345 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS02350 PF00582 Universal stress protein family FX988_RS02355 PF00989 PAS fold FX988_RS02355 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS02355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS02360 PF00196 Bacterial regulatory proteins, luxR family FX988_RS02360 PF00072 Response regulator receiver domain FX988_RS02365 PF00072 Response regulator receiver domain FX988_RS02365 PF00196 Bacterial regulatory proteins, luxR family FX988_RS02375 PF00403 Heavy-metal-associated domain FX988_RS02380 PF13411 MerR HTH family regulatory protein FX988_RS02385 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS02385 PF00072 Response regulator receiver domain FX988_RS02390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FX988_RS02390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FX988_RS02395 PF00365 Phosphofructokinase FX988_RS02400 PF00027 Cyclic nucleotide-binding domain FX988_RS02400 PF13545 Crp-like helix-turn-helix domain FX988_RS02410 PF00072 Response regulator receiver domain FX988_RS02410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FX988_RS02410 PF00672 HAMP domain FX988_RS02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS02410 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS02410 PF01627 Hpt domain FX988_RS02415 PF02253 Phospholipase A1 FX988_RS02420 PF00691 OmpA family FX988_RS02420 PF05736 OprF membrane domain FX988_RS02430 PF08281 Sigma-70, region 4 FX988_RS02430 PF04542 Sigma-70 region 2 FX988_RS02450 PF00210 Ferritin-like domain FX988_RS02455 PF00210 Ferritin-like domain FX988_RS02465 PF00115 Cytochrome C and Quinol oxidase polypeptide I FX988_RS02480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FX988_RS02480 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FX988_RS02490 PF00403 Heavy-metal-associated domain FX988_RS02505 PF00582 Universal stress protein family FX988_RS02510 PF01171 PP-loop family FX988_RS02515 PF01734 Patatin-like phospholipase FX988_RS02530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FX988_RS02540 PF01810 LysE type translocator FX988_RS02545 PF02146 Sir2 family FX988_RS02555 PF10415 Fumarase C C-terminus FX988_RS02555 PF00206 Lyase FX988_RS02560 PF01425 Amidase FX988_RS02570 PF01925 Sulfite exporter TauE/SafE FX988_RS02575 PF00266 Aminotransferase class-V FX988_RS02580 PF07687 Peptidase dimerisation domain FX988_RS02580 PF01546 Peptidase family M20/M25/M40 FX988_RS02590 PF01613 Flavin reductase like domain FX988_RS02595 PF04960 Glutaminase FX988_RS02605 PF00005 ABC transporter FX988_RS02620 PF00266 Aminotransferase class-V FX988_RS02625 PF00132 Bacterial transferase hexapeptide (six repeats) FX988_RS02635 PF00069 Protein kinase domain FX988_RS02640 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FX988_RS02645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FX988_RS02645 PF00364 Biotin-requiring enzyme FX988_RS02645 PF02817 e3 binding domain FX988_RS02650 PF02779 Transketolase, pyrimidine binding domain FX988_RS02650 PF02780 Transketolase, C-terminal domain FX988_RS02655 PF00676 Dehydrogenase E1 component FX988_RS02655 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FX988_RS02665 PF00155 Aminotransferase class I and II FX988_RS02675 PF01370 NAD dependent epimerase/dehydratase family FX988_RS02685 PF13286 Phosphohydrolase-associated domain FX988_RS02685 PF01966 HD domain FX988_RS02690 PF00174 Oxidoreductase molybdopterin binding domain FX988_RS02695 PF01794 Ferric reductase like transmembrane component FX988_RS02705 PF02810 SEC-C motif FX988_RS02715 PF07977 FabA-like domain FX988_RS02720 PF04957 Ribosome modulation factor FX988_RS02740 PF02926 THUMP domain FX988_RS02740 PF10672 S-adenosylmethionine-dependent methyltransferase FX988_RS02740 PF01170 Putative RNA methylase family UPF0020 FX988_RS02745 PF07126 Cell-division protein ZapC FX988_RS02750 PF01180 Dihydroorotate dehydrogenase FX988_RS02755 PF05088 Bacterial NAD-glutamate dehydrogenase FX988_RS02770 PF07044 Protein of unknown function (DUF1329) FX988_RS02785 PF11940 Domain of unknown function (DUF3458) Ig-like fold FX988_RS02785 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FX988_RS02785 PF01433 Peptidase family M1 domain FX988_RS02795 PF00209 Sodium:neurotransmitter symporter family FX988_RS02800 PF11818 C-terminal domain of tail specific protease (DUF3340) FX988_RS02800 PF03572 Peptidase family S41 FX988_RS02800 PF17804 Tail specific protease N-terminal domain FX988_RS02800 PF00595 PDZ domain FX988_RS02805 PF17516 ProQ C-terminal domain FX988_RS02805 PF04352 ProQ/FINO family FX988_RS02815 PF13185 GAF domain FX988_RS02820 PF01322 Cytochrome C' FX988_RS02825 PF01556 DnaJ C terminal domain FX988_RS02825 PF00684 DnaJ central domain FX988_RS02825 PF00226 DnaJ domain FX988_RS02830 PF00012 Hsp70 protein FX988_RS02835 PF01025 GrpE FX988_RS02840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FX988_RS02840 PF00672 HAMP domain FX988_RS02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS02840 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS02840 PF01627 Hpt domain FX988_RS02840 PF00072 Response regulator receiver domain FX988_RS02850 PF00072 Response regulator receiver domain FX988_RS02850 PF00196 Bacterial regulatory proteins, luxR family FX988_RS02855 PF00593 TonB dependent receptor FX988_RS02855 PF07715 TonB-dependent Receptor Plug Domain FX988_RS02865 PF00561 alpha/beta hydrolase fold FX988_RS02900 PF00141 Peroxidase FX988_RS02925 PF04320 Protein with unknown function (DUF469) FX988_RS02955 PF02798 Glutathione S-transferase, N-terminal domain FX988_RS02955 PF00043 Glutathione S-transferase, C-terminal domain FX988_RS02985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FX988_RS02985 PF11852 Domain of unknown function (DUF3372) FX988_RS02985 PF03714 Bacterial pullanase-associated domain FX988_RS02985 PF18494 Pullulanase Ins domain FX988_RS02985 PF17967 Pullulanase N2 domain FX988_RS03000 PF04820 Tryptophan halogenase FX988_RS03020 PF00899 ThiF family FX988_RS03025 PF02581 Thiamine monophosphate synthase FX988_RS03030 PF05690 Thiazole biosynthesis protein ThiG FX988_RS03040 PF01266 FAD dependent oxidoreductase FX988_RS03045 PF01964 Radical SAM ThiC family FX988_RS03045 PF13667 ThiC-associated domain FX988_RS03060 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS03060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FX988_RS03065 PF07690 Major Facilitator Superfamily FX988_RS03075 PF00672 HAMP domain FX988_RS03075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS03105 PF13533 Biotin-lipoyl like FX988_RS03110 PF00873 AcrB/AcrD/AcrF family FX988_RS03115 PF00873 AcrB/AcrD/AcrF family FX988_RS03120 PF00248 Aldo/keto reductase family FX988_RS03130 PF13533 Biotin-lipoyl like FX988_RS03135 PF00873 AcrB/AcrD/AcrF family FX988_RS03140 PF00384 Molybdopterin oxidoreductase FX988_RS03140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FX988_RS03140 PF01568 Molydopterin dinucleotide binding domain FX988_RS03145 PF06906 Protein of unknown function (DUF1272) FX988_RS03155 PF00005 ABC transporter FX988_RS03165 PF00005 ABC transporter FX988_RS03165 PF12704 MacB-like periplasmic core domain FX988_RS03165 PF02687 FtsX-like permease family FX988_RS03170 PF02449 Beta-galactosidase FX988_RS03170 PF17992 Agarase CBM like domain FX988_RS03175 PF00083 Sugar (and other) transporter FX988_RS03200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS03200 PF00672 HAMP domain FX988_RS03200 PF02743 Cache domain FX988_RS03250 PF00563 EAL domain FX988_RS03250 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS03250 PF03707 Bacterial signalling protein N terminal repeat FX988_RS03255 PF08447 PAS fold FX988_RS03255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS03260 PF00072 Response regulator receiver domain FX988_RS03265 PF00989 PAS fold FX988_RS03265 PF00072 Response regulator receiver domain FX988_RS03265 PF01627 Hpt domain FX988_RS03265 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS03265 PF18415 Histidine kinase receptor ArcB trans-membrane domain FX988_RS03275 PF00486 Transcriptional regulatory protein, C terminal FX988_RS03275 PF00072 Response regulator receiver domain FX988_RS03280 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS03280 PF00672 HAMP domain FX988_RS03285 PF03707 Bacterial signalling protein N terminal repeat FX988_RS03285 PF00563 EAL domain FX988_RS03285 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS03295 PF00248 Aldo/keto reductase family FX988_RS03305 PF12795 Mechanosensitive ion channel porin domain FX988_RS03305 PF12794 Mechanosensitive ion channel inner membrane domain 1 FX988_RS03305 PF00924 Mechanosensitive ion channel FX988_RS03310 PF00593 TonB dependent receptor FX988_RS03310 PF07715 TonB-dependent Receptor Plug Domain FX988_RS03335 PF00999 Sodium/hydrogen exchanger family FX988_RS03335 PF02254 TrkA-N domain FX988_RS03350 PF01557 Fumarylacetoacetate (FAA) hydrolase family FX988_RS03355 PF00775 Dioxygenase FX988_RS03355 PF04444 Catechol dioxygenase N terminus FX988_RS03365 PF02447 GntP family permease FX988_RS03370 PF01042 Endoribonuclease L-PSP FX988_RS03375 PF00580 UvrD/REP helicase N-terminal domain FX988_RS03375 PF13361 UvrD-like helicase C-terminal domain FX988_RS03375 PF12462 DNA helicase IV / RNA helicase N terminal FX988_RS03390 PF03458 UPF0126 domain FX988_RS03395 PF18331 PKHD-type hydroxylase C-terminal domain FX988_RS03395 PF13640 2OG-Fe(II) oxygenase superfamily FX988_RS03400 PF01070 FMN-dependent dehydrogenase FX988_RS03405 PF00593 TonB dependent receptor FX988_RS03405 PF07715 TonB-dependent Receptor Plug Domain FX988_RS03410 PF03544 Gram-negative bacterial TonB protein C-terminal FX988_RS03415 PF02472 Biopolymer transport protein ExbD/TolR FX988_RS03425 PF01618 MotA/TolQ/ExbB proton channel family FX988_RS03440 PF01293 Phosphoenolpyruvate carboxykinase FX988_RS03445 PF07237 Protein of unknown function (DUF1428) FX988_RS03485 PF00356 Bacterial regulatory proteins, lacI family FX988_RS03495 PF03328 HpcH/HpaI aldolase/citrate lyase family FX988_RS03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS03500 PF03466 LysR substrate binding domain FX988_RS03520 PF00561 alpha/beta hydrolase fold FX988_RS03550 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FX988_RS03580 PF00474 Sodium:solute symporter family FX988_RS03590 PF07715 TonB-dependent Receptor Plug Domain FX988_RS03590 PF00593 TonB dependent receptor FX988_RS03600 PF00970 Oxidoreductase FAD-binding domain FX988_RS03600 PF00175 Oxidoreductase NAD-binding domain FX988_RS03610 PF01810 LysE type translocator FX988_RS03640 PF00196 Bacterial regulatory proteins, luxR family FX988_RS03640 PF00072 Response regulator receiver domain FX988_RS03645 PF17200 Single Cache domain 2 FX988_RS03645 PF07730 Histidine kinase FX988_RS03650 PF03480 Bacterial extracellular solute-binding protein, family 7 FX988_RS03660 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FX988_RS03675 PF00080 Copper/zinc superoxide dismutase (SODC) FX988_RS03690 PF00486 Transcriptional regulatory protein, C terminal FX988_RS03690 PF00072 Response regulator receiver domain FX988_RS03695 PF00072 Response regulator receiver domain FX988_RS03695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS03700 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS03700 PF14759 Reductase C-terminal FX988_RS03705 PF00111 2Fe-2S iron-sulfur cluster binding domain FX988_RS03710 PF00067 Cytochrome P450 FX988_RS03720 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS03720 PF00107 Zinc-binding dehydrogenase FX988_RS03730 PF10502 Signal peptidase, peptidase S26 FX988_RS03735 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS03745 PF03466 LysR substrate binding domain FX988_RS03745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS03750 PF00072 Response regulator receiver domain FX988_RS03750 PF00486 Transcriptional regulatory protein, C terminal FX988_RS03780 PF07660 Secretin and TonB N terminus short domain FX988_RS03780 PF07715 TonB-dependent Receptor Plug Domain FX988_RS03780 PF00593 TonB dependent receptor FX988_RS03790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FX988_RS03790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FX988_RS03795 PF05853 beta-keto acid cleavage enzyme FX988_RS03815 PF01614 Bacterial transcriptional regulator FX988_RS03815 PF09339 IclR helix-turn-helix domain FX988_RS03820 PF00849 RNA pseudouridylate synthase FX988_RS03825 PF07690 Major Facilitator Superfamily FX988_RS03830 PF00270 DEAD/DEAH box helicase FX988_RS03830 PF00271 Helicase conserved C-terminal domain FX988_RS03835 PF00593 TonB dependent receptor FX988_RS03835 PF07715 TonB-dependent Receptor Plug Domain FX988_RS03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS03840 PF03466 LysR substrate binding domain FX988_RS03845 PF00596 Class II Aldolase and Adducin N-terminal domain FX988_RS03860 PF01966 HD domain FX988_RS03870 PF00497 Bacterial extracellular solute-binding proteins, family 3 FX988_RS03875 PF17137 Domain of unknown function (DUF5110) FX988_RS03875 PF16338 Domain of unknown function (DUF4968) FX988_RS03875 PF13802 Galactose mutarotase-like FX988_RS03875 PF01055 Glycosyl hydrolases family 31 FX988_RS03880 PF00756 Putative esterase FX988_RS03885 PF00128 Alpha amylase, catalytic domain FX988_RS03910 PF13411 MerR HTH family regulatory protein FX988_RS03925 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FX988_RS03955 PF01066 CDP-alcohol phosphatidyltransferase FX988_RS03960 PF02151 UvrB/uvrC motif FX988_RS03960 PF01541 GIY-YIG catalytic domain FX988_RS03960 PF08459 UvrC Helix-hairpin-helix N-terminal FX988_RS03965 PF00196 Bacterial regulatory proteins, luxR family FX988_RS03965 PF00072 Response regulator receiver domain FX988_RS03985 PF01027 Inhibitor of apoptosis-promoting Bax1 FX988_RS03990 PF02635 DsrE/DsrF-like family FX988_RS03995 PF02635 DsrE/DsrF-like family FX988_RS04005 PF04358 DsrC like protein FX988_RS04010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FX988_RS04010 PF02403 Seryl-tRNA synthetase N-terminal domain FX988_RS04015 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FX988_RS04020 PF16193 AAA C-terminal domain FX988_RS04020 PF12002 MgsA AAA+ ATPase C terminal FX988_RS04020 PF00004 ATPase family associated with various cellular activities (AAA) FX988_RS04025 PF03548 Outer membrane lipoprotein carrier protein LolA FX988_RS04030 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FX988_RS04030 PF01580 FtsK/SpoIIIE family FX988_RS04030 PF09397 Ftsk gamma domain FX988_RS04030 PF17854 FtsK alpha domain FX988_RS04035 PF01037 Lrp/AsnC ligand binding domain FX988_RS04040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FX988_RS04040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FX988_RS04045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FX988_RS04050 PF18073 Rubredoxin metal binding domain FX988_RS04060 PF00216 Bacterial DNA-binding protein FX988_RS04065 PF00575 S1 RNA binding domain FX988_RS04070 PF02224 Cytidylate kinase FX988_RS04075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FX988_RS04080 PF00266 Aminotransferase class-V FX988_RS04085 PF00521 DNA gyrase/topoisomerase IV, subunit A FX988_RS04085 PF03989 DNA gyrase C-terminal domain, beta-propeller FX988_RS04095 PF13419 Haloacid dehalogenase-like hydrolase FX988_RS04100 PF02867 Ribonucleotide reductase, barrel domain FX988_RS04100 PF03477 ATP cone domain FX988_RS04100 PF00317 Ribonucleotide reductase, all-alpha domain FX988_RS04105 PF00268 Ribonucleotide reductase, small chain FX988_RS04110 PF00111 2Fe-2S iron-sulfur cluster binding domain FX988_RS04115 PF13537 Glutamine amidotransferase domain FX988_RS04115 PF00733 Asparagine synthase FX988_RS04120 PF01259 SAICAR synthetase FX988_RS04125 PF06804 NlpB/DapX lipoprotein FX988_RS04130 PF00701 Dihydrodipicolinate synthetase family FX988_RS04140 PF00578 AhpC/TSA family FX988_RS04145 PF01594 AI-2E family transporter FX988_RS04150 PF01435 Peptidase family M48 FX988_RS04160 PF03960 ArsC family FX988_RS04165 PF03358 NADPH-dependent FMN reductase FX988_RS04175 PF00308 Bacterial dnaA protein FX988_RS04185 PF02769 AIR synthase related protein, C-terminal domain FX988_RS04185 PF00586 AIR synthase related protein, N-terminal domain FX988_RS04190 PF00551 Formyl transferase FX988_RS04200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS04200 PF09317 Domain of unknown function (DUF1974) FX988_RS04200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS04200 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS04205 PF00216 Bacterial DNA-binding protein FX988_RS04210 PF03147 Ferredoxin-fold anticodon binding domain FX988_RS04210 PF03484 tRNA synthetase B5 domain FX988_RS04210 PF03483 B3/4 domain FX988_RS04210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FX988_RS04210 PF01588 Putative tRNA binding domain FX988_RS04215 PF01409 tRNA synthetases class II core domain (F) FX988_RS04215 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FX988_RS04220 PF00453 Ribosomal protein L20 FX988_RS04225 PF01632 Ribosomal protein L35 FX988_RS04235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FX988_RS04235 PF03129 Anticodon binding domain FX988_RS04235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FX988_RS04235 PF02824 TGS domain FX988_RS04265 PF02028 BCCT, betaine/carnitine/choline family transporter FX988_RS04280 PF00072 Response regulator receiver domain FX988_RS04280 PF01339 CheB methylesterase FX988_RS04285 PF03975 CheD chemotactic sensory transduction FX988_RS04290 PF03705 CheR methyltransferase, all-alpha domain FX988_RS04290 PF01739 CheR methyltransferase, SAM binding domain FX988_RS04295 PF13426 PAS domain FX988_RS04295 PF08447 PAS fold FX988_RS04295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS04300 PF01584 CheW-like domain FX988_RS04305 PF01627 Hpt domain FX988_RS04305 PF01584 CheW-like domain FX988_RS04305 PF09078 CheY binding FX988_RS04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS04305 PF02895 Signal transducing histidine kinase, homodimeric domain FX988_RS04310 PF00072 Response regulator receiver domain FX988_RS04315 PF00072 Response regulator receiver domain FX988_RS04315 PF12431 Transcriptional regulator FX988_RS04320 PF13466 STAS domain FX988_RS04325 PF02743 Cache domain FX988_RS04325 PF00672 HAMP domain FX988_RS04325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS04345 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FX988_RS04350 PF00111 2Fe-2S iron-sulfur cluster binding domain FX988_RS04350 PF01799 [2Fe-2S] binding domain FX988_RS04360 PF02625 XdhC and CoxI family FX988_RS04360 PF13478 XdhC Rossmann domain FX988_RS04375 PF00158 Sigma-54 interaction domain FX988_RS04375 PF01590 GAF domain FX988_RS04380 PF00291 Pyridoxal-phosphate dependent enzyme FX988_RS04390 PF06224 Winged helix DNA-binding domain FX988_RS04410 PF05532 CsbD-like FX988_RS04415 PF04237 YjbR FX988_RS04425 PF12704 MacB-like periplasmic core domain FX988_RS04425 PF02687 FtsX-like permease family FX988_RS04435 PF00270 DEAD/DEAH box helicase FX988_RS04435 PF00271 Helicase conserved C-terminal domain FX988_RS04435 PF03461 TRCF domain FX988_RS04435 PF17757 UvrB interaction domain FX988_RS04435 PF02559 CarD-like/TRCF domain FX988_RS04455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FX988_RS04455 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FX988_RS04465 PF03466 LysR substrate binding domain FX988_RS04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS04475 PF00939 Sodium:sulfate symporter transmembrane region FX988_RS04480 PF00933 Glycosyl hydrolase family 3 N terminal domain FX988_RS04485 PF01513 ATP-NAD kinase FX988_RS04490 PF02463 RecF/RecN/SMC N terminal domain FX988_RS04495 PF04355 SmpA / OmlA family FX988_RS04500 PF00005 ABC transporter FX988_RS04500 PF12848 ABC transporter FX988_RS04510 PF07664 Ferrous iron transport protein B C terminus FX988_RS04510 PF07670 Nucleoside recognition FX988_RS04510 PF02421 Ferrous iron transport protein B FX988_RS04520 PF01474 Class-II DAHP synthetase family FX988_RS04550 PF07859 alpha/beta hydrolase fold FX988_RS04555 PF02311 AraC-like ligand binding domain FX988_RS04555 PF12833 Helix-turn-helix domain FX988_RS04560 PF00106 short chain dehydrogenase FX988_RS04570 PF01451 Low molecular weight phosphotyrosine protein phosphatase FX988_RS04575 PF04403 Paraquat-inducible protein A FX988_RS04580 PF02470 MlaD protein FX988_RS04590 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS04590 PF08448 PAS fold FX988_RS04595 PF00664 ABC transporter transmembrane region FX988_RS04595 PF00005 ABC transporter FX988_RS04600 PF12843 Putative quorum-sensing-regulated virulence factor FX988_RS04615 PF00312 Ribosomal protein S15 FX988_RS04620 PF09157 Pseudouridine synthase II TruB, C-terminal FX988_RS04620 PF01509 TruB family pseudouridylate synthase (N terminal domain) FX988_RS04620 PF16198 tRNA pseudouridylate synthase B C-terminal domain FX988_RS04625 PF02033 Ribosome-binding factor A FX988_RS04630 PF04760 Translation initiation factor IF-2, N-terminal region FX988_RS04630 PF08364 Bacterial translation initiation factor IF-2 associated region FX988_RS04630 PF03144 Elongation factor Tu domain 2 FX988_RS04630 PF00009 Elongation factor Tu GTP binding domain FX988_RS04630 PF11987 Translation-initiation factor 2 FX988_RS04635 PF08529 NusA N-terminal domain FX988_RS04635 PF13184 NusA-like KH domain FX988_RS04635 PF00575 S1 RNA binding domain FX988_RS04640 PF02576 RimP N-terminal domain FX988_RS04640 PF17384 RimP C-terminal SH3 domain FX988_RS04650 PF01329 Pterin 4 alpha carbinolamine dehydratase FX988_RS04655 PF07715 TonB-dependent Receptor Plug Domain FX988_RS04655 PF00593 TonB dependent receptor FX988_RS04665 PF01551 Peptidase family M23 FX988_RS04665 PF08460 Bacterial SH3 domain FX988_RS04670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS04670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS04670 PF09317 Domain of unknown function (DUF1974) FX988_RS04690 PF13378 Enolase C-terminal domain-like FX988_RS04690 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FX988_RS04695 PF00596 Class II Aldolase and Adducin N-terminal domain FX988_RS04710 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS04720 PF04389 Peptidase family M28 FX988_RS04730 PF02678 Pirin FX988_RS04730 PF17954 Quercetinase C-terminal cupin domain FX988_RS04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS04735 PF03466 LysR substrate binding domain FX988_RS04740 PF00107 Zinc-binding dehydrogenase FX988_RS04740 PF16884 N-terminal domain of oxidoreductase FX988_RS04745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS04745 PF03466 LysR substrate binding domain FX988_RS04760 PF00448 SRP54-type protein, GTPase domain FX988_RS04760 PF02978 Signal peptide binding domain FX988_RS04760 PF02881 SRP54-type protein, helical bundle domain FX988_RS04765 PF01578 Cytochrome C assembly protein FX988_RS04770 PF01595 Cyclin M transmembrane N-terminal domain FX988_RS04770 PF03471 Transporter associated domain FX988_RS04770 PF00571 CBS domain FX988_RS04780 PF00300 Histidine phosphatase superfamily (branch 1) FX988_RS04785 PF05193 Peptidase M16 inactive domain FX988_RS04785 PF00675 Insulinase (Peptidase family M16) FX988_RS04790 PF03707 Bacterial signalling protein N terminal repeat FX988_RS04790 PF00563 EAL domain FX988_RS04790 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS04795 PF00378 Enoyl-CoA hydratase/isomerase FX988_RS04795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FX988_RS04795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FX988_RS04800 PF00108 Thiolase, N-terminal domain FX988_RS04800 PF02803 Thiolase, C-terminal domain FX988_RS04805 PF07726 ATPase family associated with various cellular activities (AAA) FX988_RS04805 PF17863 AAA lid domain FX988_RS04810 PF01882 Protein of unknown function DUF58 FX988_RS04820 PF00092 von Willebrand factor type A domain FX988_RS04825 PF00092 von Willebrand factor type A domain FX988_RS04825 PF07584 Aerotolerance regulator N-terminal FX988_RS04835 PF04545 Sigma-70, region 4 FX988_RS04835 PF04542 Sigma-70 region 2 FX988_RS04850 PF00474 Sodium:solute symporter family FX988_RS04855 PF08668 HDOD domain FX988_RS04855 PF00563 EAL domain FX988_RS04860 PF01507 Phosphoadenosine phosphosulfate reductase family FX988_RS04870 PF00459 Inositol monophosphatase family FX988_RS04875 PF00009 Elongation factor Tu GTP binding domain FX988_RS04880 PF03600 Citrate transporter FX988_RS04880 PF02080 TrkA-C domain FX988_RS04885 PF01479 S4 domain FX988_RS04885 PF00849 RNA pseudouridylate synthase FX988_RS04895 PF07023 Protein of unknown function (DUF1315) FX988_RS04905 PF01235 Sodium:alanine symporter family FX988_RS04910 PF18027 Cytosolic carboxypeptidase N-terminal domain FX988_RS04910 PF00246 Zinc carboxypeptidase FX988_RS04915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FX988_RS04915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FX988_RS04925 PF01641 SelR domain FX988_RS04930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FX988_RS04930 PF00128 Alpha amylase, catalytic domain FX988_RS04935 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FX988_RS04935 PF00128 Alpha amylase, catalytic domain FX988_RS04935 PF02806 Alpha amylase, C-terminal all-beta domain FX988_RS04940 PF02446 4-alpha-glucanotransferase FX988_RS04945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FX988_RS04945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FX988_RS04950 PF01263 Aldose 1-epimerase FX988_RS04955 PF03725 3' exoribonuclease family, domain 2 FX988_RS04955 PF01138 3' exoribonuclease family, domain 1 FX988_RS04955 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FX988_RS04955 PF00013 KH domain FX988_RS04955 PF00575 S1 RNA binding domain FX988_RS04965 PF00849 RNA pseudouridylate synthase FX988_RS04970 PF02646 RmuC family FX988_RS04980 PF04715 Anthranilate synthase component I, N terminal region FX988_RS04980 PF00425 chorismate binding enzyme FX988_RS04985 PF00293 NUDIX domain FX988_RS04990 PF03315 Serine dehydratase beta chain FX988_RS04990 PF03313 Serine dehydratase alpha chain FX988_RS04995 PF03466 LysR substrate binding domain FX988_RS04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS05010 PF03466 LysR substrate binding domain FX988_RS05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS05015 PF01144 Coenzyme A transferase FX988_RS05020 PF01144 Coenzyme A transferase FX988_RS05025 PF00271 Helicase conserved C-terminal domain FX988_RS05025 PF00270 DEAD/DEAH box helicase FX988_RS05030 PF00881 Nitroreductase family FX988_RS05035 PF07681 DoxX FX988_RS05045 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FX988_RS05050 PF04893 Yip1 domain FX988_RS05055 PF00156 Phosphoribosyl transferase domain FX988_RS05060 PF02674 Colicin V production protein FX988_RS05065 PF05036 Sporulation related domain FX988_RS05070 PF02875 Mur ligase family, glutamate ligase domain FX988_RS05070 PF08245 Mur ligase middle domain FX988_RS05075 PF17848 Acetyl-coA carboxylase zinc finger domain FX988_RS05075 PF01039 Carboxyl transferase domain FX988_RS05080 PF01416 tRNA pseudouridine synthase FX988_RS05085 PF00072 Response regulator receiver domain FX988_RS05085 PF00158 Sigma-54 interaction domain FX988_RS05095 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS05095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS05110 PF08402 TOBE domain FX988_RS05110 PF00005 ABC transporter FX988_RS05115 PF00528 Binding-protein-dependent transport system inner membrane component FX988_RS05120 PF13416 Bacterial extracellular solute-binding protein FX988_RS05130 PF00072 Response regulator receiver domain FX988_RS05130 PF00486 Transcriptional regulatory protein, C terminal FX988_RS05140 PF01253 Translation initiation factor SUI1 FX988_RS05145 PF00072 Response regulator receiver domain FX988_RS05150 PF00800 Prephenate dehydratase FX988_RS05150 PF01817 Chorismate mutase type II FX988_RS05160 PF01817 Chorismate mutase type II FX988_RS05160 PF02153 Prephenate dehydrogenase FX988_RS05165 PF00793 DAHP synthetase I family FX988_RS05170 PF01432 Peptidase family M3 FX988_RS05180 PF12464 Maltose acetyltransferase FX988_RS05180 PF14602 Hexapeptide repeat of succinyl-transferase FX988_RS05185 PF05971 RNA methyltransferase FX988_RS05190 PF00376 MerR family regulatory protein FX988_RS05190 PF09278 MerR, DNA binding FX988_RS05200 PF01245 Ribosomal protein L19 FX988_RS05205 PF01746 tRNA (Guanine-1)-methyltransferase FX988_RS05210 PF01782 RimM N-terminal domain FX988_RS05210 PF05239 PRC-barrel domain FX988_RS05215 PF00886 Ribosomal protein S16 FX988_RS05220 PF00005 ABC transporter FX988_RS05220 PF08402 TOBE domain FX988_RS05230 PF03840 Preprotein translocase SecG subunit FX988_RS05235 PF00121 Triosephosphate isomerase FX988_RS05240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FX988_RS05240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FX988_RS05240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FX988_RS05240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FX988_RS05245 PF00809 Pterin binding enzyme FX988_RS05250 PF00004 ATPase family associated with various cellular activities (AAA) FX988_RS05250 PF17862 AAA+ lid domain FX988_RS05250 PF06480 FtsH Extracellular FX988_RS05250 PF01434 Peptidase family M41 FX988_RS05255 PF01728 FtsJ-like methyltransferase FX988_RS05260 PF01985 CRS1 / YhbY (CRM) domain FX988_RS05265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FX988_RS05270 PF05362 Lon protease (S16) C-terminal proteolytic domain FX988_RS05270 PF13654 AAA domain FX988_RS05280 PF13603 Leucyl-tRNA synthetase, Domain 2 FX988_RS05280 PF08264 Anticodon-binding domain of tRNA FX988_RS05280 PF00133 tRNA synthetases class I (I, L, M and V) FX988_RS05295 PF01467 Cytidylyltransferase-like FX988_RS05305 PF02590 Predicted SPOUT methyltransferase FX988_RS05310 PF03717 Penicillin-binding Protein dimerisation domain FX988_RS05310 PF00905 Penicillin binding protein transpeptidase domain FX988_RS05315 PF01098 Cell cycle protein FX988_RS05320 PF13406 Transglycosylase SLT domain FX988_RS05325 PF03330 Lytic transglycolase FX988_RS05325 PF05036 Sporulation related domain FX988_RS05330 PF07943 Penicillin-binding protein 5, C-terminal domain FX988_RS05330 PF00768 D-alanyl-D-alanine carboxypeptidase FX988_RS05335 PF04359 Protein of unknown function (DUF493) FX988_RS05340 PF03099 Biotin/lipoate A/B protein ligase family FX988_RS05345 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FX988_RS05345 PF04055 Radical SAM superfamily FX988_RS05365 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS05365 PF08448 PAS fold FX988_RS05375 PF06865 Pyrimidine/purine nucleoside phosphorylase FX988_RS05380 PF01738 Dienelactone hydrolase family FX988_RS05390 PF17763 Glutaminase/Asparaginase C-terminal domain FX988_RS05390 PF00710 Asparaginase, N-terminal FX988_RS05395 PF00313 'Cold-shock' DNA-binding domain FX988_RS05405 PF01264 Chorismate synthase FX988_RS05410 PF05175 Methyltransferase small domain FX988_RS05415 PF01713 Smr domain FX988_RS05420 PF00563 EAL domain FX988_RS05420 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS05420 PF03707 Bacterial signalling protein N terminal repeat FX988_RS05430 PF00072 Response regulator receiver domain FX988_RS05430 PF00486 Transcriptional regulatory protein, C terminal FX988_RS05440 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS05440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS05440 PF00497 Bacterial extracellular solute-binding proteins, family 3 FX988_RS05445 PF00158 Sigma-54 interaction domain FX988_RS05445 PF00072 Response regulator receiver domain FX988_RS05445 PF02954 Bacterial regulatory protein, Fis family FX988_RS05450 PF00072 Response regulator receiver domain FX988_RS05450 PF13188 PAS domain FX988_RS05450 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS05450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS05450 PF08448 PAS fold FX988_RS05460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FX988_RS05460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FX988_RS05460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FX988_RS05475 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS05475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS05475 PF00672 HAMP domain FX988_RS05480 PF00486 Transcriptional regulatory protein, C terminal FX988_RS05480 PF00072 Response regulator receiver domain FX988_RS05495 PF05724 Thiopurine S-methyltransferase (TPMT) FX988_RS05505 PF08281 Sigma-70, region 4 FX988_RS05505 PF04542 Sigma-70 region 2 FX988_RS05510 PF16220 Domain of unknown function (DUF4880) FX988_RS05510 PF04773 FecR protein FX988_RS05515 PF07715 TonB-dependent Receptor Plug Domain FX988_RS05515 PF00593 TonB dependent receptor FX988_RS05540 PF12704 MacB-like periplasmic core domain FX988_RS05540 PF02687 FtsX-like permease family FX988_RS05540 PF00005 ABC transporter FX988_RS05545 PF12704 MacB-like periplasmic core domain FX988_RS05545 PF00005 ABC transporter FX988_RS05545 PF02687 FtsX-like permease family FX988_RS05555 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FX988_RS05560 PF18030 RimK PreATP-grasp domain FX988_RS05560 PF08443 RimK-like ATP-grasp domain FX988_RS05570 PF00732 GMC oxidoreductase FX988_RS05570 PF05199 GMC oxidoreductase FX988_RS05575 PF00326 Prolyl oligopeptidase family FX988_RS05575 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FX988_RS05590 PF01432 Peptidase family M3 FX988_RS05595 PF01546 Peptidase family M20/M25/M40 FX988_RS05595 PF07687 Peptidase dimerisation domain FX988_RS05600 PF03466 LysR substrate binding domain FX988_RS05600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS05610 PF13378 Enolase C-terminal domain-like FX988_RS05610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FX988_RS05640 PF04542 Sigma-70 region 2 FX988_RS05640 PF04545 Sigma-70, region 4 FX988_RS05650 PF04349 Periplasmic glucan biosynthesis protein, MdoG FX988_RS05655 PF07840 FadR C-terminal domain FX988_RS05655 PF00392 Bacterial regulatory proteins, gntR family FX988_RS05660 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FX988_RS05665 PF02600 Disulfide bond formation protein DsbB FX988_RS05675 PF02423 Ornithine cyclodeaminase/mu-crystallin family FX988_RS05685 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FX988_RS05695 PF03692 Putative zinc- or iron-chelating domain FX988_RS05705 PF01557 Fumarylacetoacetate (FAA) hydrolase family FX988_RS05710 PF13406 Transglycosylase SLT domain FX988_RS05715 PF05166 YcgL domain FX988_RS05720 PF00570 HRDC domain FX988_RS05720 PF01612 3'-5' exonuclease FX988_RS05725 PF00501 AMP-binding enzyme FX988_RS05725 PF13193 AMP-binding enzyme C-terminal domain FX988_RS05745 PF00814 Glycoprotease family FX988_RS05750 PF13307 Helicase C-terminal domain FX988_RS05750 PF06733 DEAD_2 FX988_RS05755 PF11896 Domain of unknown function (DUF3416) FX988_RS05765 PF02107 Flagellar L-ring protein FX988_RS05820 PF00557 Metallopeptidase family M24 FX988_RS05845 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FX988_RS05845 PF00072 Response regulator receiver domain FX988_RS05845 PF00672 HAMP domain FX988_RS05845 PF01627 Hpt domain FX988_RS05845 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS05890 PF03466 LysR substrate binding domain FX988_RS05895 PF01810 LysE type translocator FX988_RS05900 PF01479 S4 domain FX988_RS05900 PF00849 RNA pseudouridylate synthase FX988_RS05905 PF04079 Segregation and condensation complex subunit ScpB FX988_RS05910 PF02616 Segregation and condensation protein ScpA FX988_RS05915 PF01300 Telomere recombination FX988_RS05920 PF02811 PHP domain FX988_RS05925 PF00425 chorismate binding enzyme FX988_RS05925 PF04715 Anthranilate synthase component I, N terminal region FX988_RS05930 PF00117 Glutamine amidotransferase class-I FX988_RS05935 PF02885 Glycosyl transferase family, helical bundle domain FX988_RS05935 PF00591 Glycosyl transferase family, a/b domain FX988_RS05940 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FX988_RS05940 PF00218 Indole-3-glycerol phosphate synthase FX988_RS05945 PF00291 Pyridoxal-phosphate dependent enzyme FX988_RS05950 PF00290 Tryptophan synthase alpha chain FX988_RS05955 PF03795 YCII-related domain FX988_RS05960 PF00472 RF-1 domain FX988_RS05970 PF00486 Transcriptional regulatory protein, C terminal FX988_RS05970 PF00072 Response regulator receiver domain FX988_RS05975 PF08918 PhoQ Sensor FX988_RS05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS05980 PF00924 Mechanosensitive ion channel FX988_RS05980 PF05552 Conserved TM helix FX988_RS05985 PF05257 CHAP domain FX988_RS05985 PF03738 Glutathionylspermidine synthase preATP-grasp FX988_RS05995 PF01568 Molydopterin dinucleotide binding domain FX988_RS05995 PF00384 Molybdopterin oxidoreductase FX988_RS06000 PF02634 FdhD/NarQ family FX988_RS06020 PF12706 Beta-lactamase superfamily domain FX988_RS06020 PF00753 Metallo-beta-lactamase superfamily FX988_RS06025 PF00884 Sulfatase FX988_RS06025 PF16347 Domain of unknown function (DUF4976) FX988_RS06030 PF07715 TonB-dependent Receptor Plug Domain FX988_RS06030 PF00593 TonB dependent receptor FX988_RS06035 PF00149 Calcineurin-like phosphoesterase FX988_RS06035 PF02872 5'-nucleotidase, C-terminal domain FX988_RS06050 PF00593 TonB dependent receptor FX988_RS06050 PF07715 TonB-dependent Receptor Plug Domain FX988_RS06080 PF07702 UTRA domain FX988_RS06080 PF00392 Bacterial regulatory proteins, gntR family FX988_RS06085 PF00664 ABC transporter transmembrane region FX988_RS06085 PF00005 ABC transporter FX988_RS06090 PF00005 ABC transporter FX988_RS06090 PF00664 ABC transporter transmembrane region FX988_RS06095 PF08173 Membrane bound YbgT-like protein FX988_RS06100 PF02322 Cytochrome bd terminal oxidase subunit II FX988_RS06105 PF01654 Cytochrome bd terminal oxidase subunit I FX988_RS06110 PF01810 LysE type translocator FX988_RS06120 PF04229 GrpB protein FX988_RS06120 PF13673 Acetyltransferase (GNAT) domain FX988_RS06130 PF04209 homogentisate 1,2-dioxygenase FX988_RS06140 PF02798 Glutathione S-transferase, N-terminal domain FX988_RS06140 PF14497 Glutathione S-transferase, C-terminal domain FX988_RS06145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FX988_RS06155 PF01062 Bestrophin, RFP-TM, chloride channel FX988_RS06160 PF02667 Short chain fatty acid transporter FX988_RS06170 PF00440 Bacterial regulatory proteins, tetR family FX988_RS06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS06180 PF03466 LysR substrate binding domain FX988_RS06185 PF00756 Putative esterase FX988_RS06190 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS06190 PF00107 Zinc-binding dehydrogenase FX988_RS06195 PF00893 Small Multidrug Resistance protein FX988_RS06200 PF03466 LysR substrate binding domain FX988_RS06200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS06210 PF01645 Conserved region in glutamate synthase FX988_RS06220 PF00106 short chain dehydrogenase FX988_RS06240 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FX988_RS06245 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FX988_RS06250 PF00107 Zinc-binding dehydrogenase FX988_RS06250 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS06255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FX988_RS06260 PF00563 EAL domain FX988_RS06260 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS06260 PF01590 GAF domain FX988_RS06260 PF00360 Phytochrome region FX988_RS06265 PF07690 Major Facilitator Superfamily FX988_RS06270 PF04303 PrpF protein FX988_RS06275 PF00694 Aconitase C-terminal domain FX988_RS06275 PF00330 Aconitase family (aconitate hydratase) FX988_RS06280 PF00285 Citrate synthase, C-terminal domain FX988_RS06290 PF07729 FCD domain FX988_RS06290 PF00392 Bacterial regulatory proteins, gntR family FX988_RS06305 PF00884 Sulfatase FX988_RS06305 PF16347 Domain of unknown function (DUF4976) FX988_RS06325 PF03702 Anhydro-N-acetylmuramic acid kinase FX988_RS06330 PF00593 TonB dependent receptor FX988_RS06330 PF07715 TonB-dependent Receptor Plug Domain FX988_RS06345 PF00893 Small Multidrug Resistance protein FX988_RS06350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FX988_RS06355 PF03009 Glycerophosphoryl diester phosphodiesterase family FX988_RS06360 PF00691 OmpA family FX988_RS06360 PF18393 MotY N-terminal domain FX988_RS06365 PF00929 Exonuclease FX988_RS06370 PF10417 C-terminal domain of 1-Cys peroxiredoxin FX988_RS06370 PF00578 AhpC/TSA family FX988_RS06375 PF04324 BFD-like [2Fe-2S] binding domain FX988_RS06380 PF00462 Glutaredoxin FX988_RS06390 PF08298 PrkA AAA domain FX988_RS06390 PF06798 PrkA serine protein kinase C-terminal domain FX988_RS06395 PF04285 Protein of unknown function (DUF444) FX988_RS06400 PF04293 SpoVR like protein FX988_RS06405 PF09905 DNA-binding protein VF530 FX988_RS06410 PF01863 Protein of unknown function DUF45 FX988_RS06415 PF06062 Uncharacterised protein family (UPF0231) FX988_RS06420 PF00873 AcrB/AcrD/AcrF family FX988_RS06440 PF16916 Dimerisation domain of Zinc Transporter FX988_RS06440 PF01545 Cation efflux family FX988_RS06450 PF01545 Cation efflux family FX988_RS06455 PF13411 MerR HTH family regulatory protein FX988_RS06470 PF00999 Sodium/hydrogen exchanger family FX988_RS06480 PF02806 Alpha amylase, C-terminal all-beta domain FX988_RS06480 PF03714 Bacterial pullanase-associated domain FX988_RS06480 PF00128 Alpha amylase, catalytic domain FX988_RS06485 PF03928 Haem-degrading FX988_RS06490 PF00248 Aldo/keto reductase family FX988_RS06495 PF03466 LysR substrate binding domain FX988_RS06495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS06500 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS06500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FX988_RS06505 PF00378 Enoyl-CoA hydratase/isomerase FX988_RS06510 PF00440 Bacterial regulatory proteins, tetR family FX988_RS06510 PF02909 Tetracyclin repressor-like, C-terminal domain FX988_RS06515 PF13193 AMP-binding enzyme C-terminal domain FX988_RS06515 PF00501 AMP-binding enzyme FX988_RS06535 PF00675 Insulinase (Peptidase family M16) FX988_RS06535 PF05193 Peptidase M16 inactive domain FX988_RS06545 PF00849 RNA pseudouridylate synthase FX988_RS06550 PF08546 Ketopantoate reductase PanE/ApbA C terminal FX988_RS06550 PF02558 Ketopantoate reductase PanE/ApbA FX988_RS06555 PF00152 tRNA synthetases class II (D, K and N) FX988_RS06555 PF01336 OB-fold nucleic acid binding domain FX988_RS06565 PF00750 tRNA synthetases class I (R) FX988_RS06565 PF03485 Arginyl tRNA synthetase N terminal domain FX988_RS06565 PF05746 DALR anticodon binding domain FX988_RS06570 PF00009 Elongation factor Tu GTP binding domain FX988_RS06570 PF16658 Class II release factor RF3, C-terminal domain FX988_RS06570 PF03144 Elongation factor Tu domain 2 FX988_RS06590 PF00106 short chain dehydrogenase FX988_RS06605 PF00440 Bacterial regulatory proteins, tetR family FX988_RS06610 PF00561 alpha/beta hydrolase fold FX988_RS06620 PF00698 Acyl transferase domain FX988_RS06620 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS06620 PF14765 Polyketide synthase dehydratase FX988_RS06620 PF02801 Beta-ketoacyl synthase, C-terminal domain FX988_RS06620 PF16197 Ketoacyl-synthetase C-terminal extension FX988_RS06620 PF00109 Beta-ketoacyl synthase, N-terminal domain FX988_RS06620 PF00550 Phosphopantetheine attachment site FX988_RS06620 PF08659 KR domain FX988_RS06625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS06625 PF03466 LysR substrate binding domain FX988_RS06635 PF00106 short chain dehydrogenase FX988_RS06660 PF00583 Acetyltransferase (GNAT) family FX988_RS06705 PF08351 Domain of unknown function (DUF1726) FX988_RS06705 PF13718 GNAT acetyltransferase 2 FX988_RS06705 PF05127 Helicase FX988_RS06705 PF17176 tRNA-binding domain FX988_RS06735 PF06280 Fn3-like domain FX988_RS06735 PF00746 LPXTG cell wall anchor motif FX988_RS06735 PF02225 PA domain FX988_RS06735 PF00082 Subtilase family FX988_RS06745 PF01066 CDP-alcohol phosphatidyltransferase FX988_RS06760 PF00004 ATPase family associated with various cellular activities (AAA) FX988_RS06760 PF17871 AAA lid domain FX988_RS06760 PF02861 Clp amino terminal domain, pathogenicity island component FX988_RS06760 PF07724 AAA domain (Cdc48 subfamily) FX988_RS06760 PF10431 C-terminal, D2-small domain, of ClpB protein FX988_RS06770 PF00849 RNA pseudouridylate synthase FX988_RS06770 PF01479 S4 domain FX988_RS06775 PF13525 Outer membrane lipoprotein FX988_RS06785 PF04545 Sigma-70, region 4 FX988_RS06785 PF04542 Sigma-70 region 2 FX988_RS06800 PF00106 short chain dehydrogenase FX988_RS06830 PF00691 OmpA family FX988_RS06830 PF13677 Membrane MotB of proton-channel complex MotA/MotB FX988_RS06835 PF01618 MotA/TolQ/ExbB proton channel family FX988_RS06840 PF02609 Exonuclease VII small subunit FX988_RS06845 PF00348 Polyprenyl synthetase FX988_RS06850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FX988_RS06850 PF02779 Transketolase, pyrimidine binding domain FX988_RS06850 PF02780 Transketolase, C-terminal domain FX988_RS06855 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FX988_RS06860 PF04608 Phosphatidylglycerophosphatase A FX988_RS06865 PF00586 AIR synthase related protein, N-terminal domain FX988_RS06865 PF02769 AIR synthase related protein, C-terminal domain FX988_RS06870 PF01029 NusB family FX988_RS06875 PF00885 6,7-dimethyl-8-ribityllumazine synthase FX988_RS06880 PF00925 GTP cyclohydrolase II FX988_RS06880 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FX988_RS06885 PF00677 Lumazine binding domain FX988_RS06890 PF01872 RibD C-terminal domain FX988_RS06890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FX988_RS06895 PF03477 ATP cone domain FX988_RS06915 PF00464 Serine hydroxymethyltransferase FX988_RS06920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FX988_RS06920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FX988_RS06930 PF00005 ABC transporter FX988_RS06930 PF12848 ABC transporter FX988_RS06935 PF00672 HAMP domain FX988_RS06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS06935 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS06935 PF13426 PAS domain FX988_RS06940 PF01040 UbiA prenyltransferase family FX988_RS06945 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FX988_RS06950 PF00510 Cytochrome c oxidase subunit III FX988_RS06955 PF00115 Cytochrome C and Quinol oxidase polypeptide I FX988_RS06960 PF06481 COX Aromatic Rich Motif FX988_RS06960 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FX988_RS07000 PF00694 Aconitase C-terminal domain FX988_RS07000 PF00330 Aconitase family (aconitate hydratase) FX988_RS07010 PF03707 Bacterial signalling protein N terminal repeat FX988_RS07010 PF00563 EAL domain FX988_RS07010 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS07025 PF18073 Rubredoxin metal binding domain FX988_RS07035 PF18429 Domain of unknown function (DUF5609) FX988_RS07040 PF01980 tRNA-methyltransferase O FX988_RS07040 PF18389 TrmO C-terminal domain FX988_RS07045 PF03129 Anticodon binding domain FX988_RS07045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FX988_RS07045 PF04073 Aminoacyl-tRNA editing domain FX988_RS07065 PF07308 Protein of unknown function (DUF1456) FX988_RS07070 PF01039 Carboxyl transferase domain FX988_RS07075 PF02254 TrkA-N domain FX988_RS07075 PF00999 Sodium/hydrogen exchanger family FX988_RS07075 PF02080 TrkA-C domain FX988_RS07080 PF00563 EAL domain FX988_RS07080 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS07080 PF03707 Bacterial signalling protein N terminal repeat FX988_RS07090 PF03466 LysR substrate binding domain FX988_RS07090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS07100 PF01171 PP-loop family FX988_RS07100 PF11734 TilS substrate C-terminal domain FX988_RS07100 PF09179 TilS substrate binding domain FX988_RS07105 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FX988_RS07110 PF01336 OB-fold nucleic acid binding domain FX988_RS07110 PF02811 PHP domain FX988_RS07110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FX988_RS07110 PF14579 Helix-hairpin-helix motif FX988_RS07110 PF07733 Bacterial DNA polymerase III alpha NTPase domain FX988_RS07115 PF01351 Ribonuclease HII FX988_RS07120 PF02684 Lipid-A-disaccharide synthetase FX988_RS07125 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FX988_RS07125 PF00132 Bacterial transferase hexapeptide (six repeats) FX988_RS07130 PF07977 FabA-like domain FX988_RS07135 PF00132 Bacterial transferase hexapeptide (six repeats) FX988_RS07135 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FX988_RS07140 PF03938 Outer membrane protein (OmpH-like) FX988_RS07145 PF07244 Surface antigen variable number repeat FX988_RS07145 PF01103 Surface antigen FX988_RS07150 PF02163 Peptidase family M50 FX988_RS07150 PF17820 PDZ domain FX988_RS07155 PF13288 DXP reductoisomerase C-terminal domain FX988_RS07155 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FX988_RS07155 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FX988_RS07165 PF01255 Putative undecaprenyl diphosphate synthase FX988_RS07170 PF01765 Ribosome recycling factor FX988_RS07175 PF00696 Amino acid kinase family FX988_RS07180 PF00889 Elongation factor TS FX988_RS07185 PF00318 Ribosomal protein S2 FX988_RS07190 PF00557 Metallopeptidase family M24 FX988_RS07195 PF01966 HD domain FX988_RS07195 PF01909 Nucleotidyltransferase domain FX988_RS07195 PF01842 ACT domain FX988_RS07195 PF08335 GlnD PII-uridylyltransferase FX988_RS07215 PF00111 2Fe-2S iron-sulfur cluster binding domain FX988_RS07220 PF00012 Hsp70 protein FX988_RS07225 PF07743 HSCB C-terminal oligomerisation domain FX988_RS07230 PF01521 Iron-sulphur cluster biosynthesis FX988_RS07235 PF01592 NifU-like N terminal domain FX988_RS07240 PF00266 Aminotransferase class-V FX988_RS07245 PF02082 Transcriptional regulator FX988_RS07250 PF06426 Serine acetyltransferase, N-terminal FX988_RS07250 PF00132 Bacterial transferase hexapeptide (six repeats) FX988_RS07255 PF00588 SpoU rRNA Methylase family FX988_RS07265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FX988_RS07270 PF00459 Inositol monophosphatase family FX988_RS07275 PF07549 SecD/SecF GG Motif FX988_RS07275 PF02355 Protein export membrane protein FX988_RS07280 PF02355 Protein export membrane protein FX988_RS07280 PF07549 SecD/SecF GG Motif FX988_RS07280 PF13721 SecD export protein N-terminal TM region FX988_RS07285 PF02699 Preprotein translocase subunit FX988_RS07290 PF01702 Queuine tRNA-ribosyltransferase FX988_RS07295 PF02547 Queuosine biosynthesis protein FX988_RS07310 PF04012 PspA/IM30 family FX988_RS07330 PF06693 Protein of unknown function (DUF1190) FX988_RS07335 PF03738 Glutathionylspermidine synthase preATP-grasp FX988_RS07340 PF01694 Rhomboid family FX988_RS07350 PF00245 Alkaline phosphatase FX988_RS07355 PF00463 Isocitrate lyase family FX988_RS07360 PF03466 LysR substrate binding domain FX988_RS07360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS07365 PF01274 Malate synthase FX988_RS07395 PF01370 NAD dependent epimerase/dehydratase family FX988_RS07400 PF02698 DUF218 domain FX988_RS07455 PF13537 Glutamine amidotransferase domain FX988_RS07455 PF00733 Asparagine synthase FX988_RS07460 PF00534 Glycosyl transferases group 1 FX988_RS07460 PF13439 Glycosyltransferase Family 4 FX988_RS07470 PF13439 Glycosyltransferase Family 4 FX988_RS07470 PF00534 Glycosyl transferases group 1 FX988_RS07495 PF01943 Polysaccharide biosynthesis protein FX988_RS07565 PF02397 Bacterial sugar transferase FX988_RS07580 PF13614 AAA domain FX988_RS07590 PF00999 Sodium/hydrogen exchanger family FX988_RS07590 PF02254 TrkA-N domain FX988_RS07600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FX988_RS07610 PF00850 Histone deacetylase domain FX988_RS07615 PF04337 Protein of unknown function, DUF480 FX988_RS07635 PF00732 GMC oxidoreductase FX988_RS07635 PF05199 GMC oxidoreductase FX988_RS07645 PF12833 Helix-turn-helix domain FX988_RS07645 PF02311 AraC-like ligand binding domain FX988_RS07650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FX988_RS07650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FX988_RS07670 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FX988_RS07670 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FX988_RS07675 PF00072 Response regulator receiver domain FX988_RS07675 PF04397 LytTr DNA-binding domain FX988_RS07680 PF06580 Histidine kinase FX988_RS07680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS07680 PF07694 5TMR of 5TMR-LYT FX988_RS07685 PF00072 Response regulator receiver domain FX988_RS07685 PF04397 LytTr DNA-binding domain FX988_RS07690 PF00593 TonB dependent receptor FX988_RS07730 PF00462 Glutaredoxin FX988_RS07735 PF01219 Prokaryotic diacylglycerol kinase FX988_RS07740 PF08019 Phosphoethanolamine transferase EptA/EptB FX988_RS07740 PF00884 Sulfatase FX988_RS07745 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FX988_RS07755 PF00535 Glycosyl transferase family 2 FX988_RS07760 PF00072 Response regulator receiver domain FX988_RS07760 PF00486 Transcriptional regulatory protein, C terminal FX988_RS07765 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS07765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS07765 PF00672 HAMP domain FX988_RS07770 PF03929 PepSY-associated TM region FX988_RS07775 PF07715 TonB-dependent Receptor Plug Domain FX988_RS07775 PF00593 TonB dependent receptor FX988_RS07780 PF00005 ABC transporter FX988_RS07785 PF01032 FecCD transport family FX988_RS07790 PF02277 Phosphoribosyltransferase FX988_RS07795 PF02654 Cobalamin-5-phosphate synthase FX988_RS07800 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FX988_RS07810 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FX988_RS07810 PF07685 CobB/CobQ-like glutamine amidotransferase domain FX988_RS07815 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FX988_RS07815 PF12557 Cob(I)alamin adenosyltransferase N terminal FX988_RS07820 PF01497 Periplasmic binding protein FX988_RS07825 PF00300 Histidine phosphatase superfamily (branch 1) FX988_RS07830 PF03186 CobD/Cbib protein FX988_RS07835 PF00155 Aminotransferase class I and II FX988_RS07840 PF00378 Enoyl-CoA hydratase/isomerase FX988_RS07845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FX988_RS07845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FX988_RS07875 PF01795 MraW methylase family FX988_RS07880 PF00884 Sulfatase FX988_RS07885 PF07715 TonB-dependent Receptor Plug Domain FX988_RS07885 PF00593 TonB dependent receptor FX988_RS07890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FX988_RS07890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FX988_RS07890 PF00378 Enoyl-CoA hydratase/isomerase FX988_RS07895 PF01557 Fumarylacetoacetate (FAA) hydrolase family FX988_RS07900 PF01614 Bacterial transcriptional regulator FX988_RS07900 PF09339 IclR helix-turn-helix domain FX988_RS07915 PF03466 LysR substrate binding domain FX988_RS07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS07920 PF02798 Glutathione S-transferase, N-terminal domain FX988_RS07925 PF00042 Globin FX988_RS07925 PF00175 Oxidoreductase NAD-binding domain FX988_RS07925 PF00970 Oxidoreductase FAD-binding domain FX988_RS07945 PF04041 beta-1,4-mannooligosaccharide phosphorylase FX988_RS07955 PF00356 Bacterial regulatory proteins, lacI family FX988_RS07965 PF00884 Sulfatase FX988_RS07965 PF16385 Domain of unknown function FX988_RS07970 PF09297 NADH pyrophosphatase zinc ribbon domain FX988_RS07970 PF00293 NUDIX domain FX988_RS07980 PF02156 Glycosyl hydrolase family 26 FX988_RS07985 PF00593 TonB dependent receptor FX988_RS07985 PF07715 TonB-dependent Receptor Plug Domain FX988_RS07990 PF02554 Carbon starvation protein CstA FX988_RS08000 PF00199 Catalase FX988_RS08000 PF06628 Catalase-related immune-responsive FX988_RS08015 PF06969 HemN C-terminal domain FX988_RS08015 PF04055 Radical SAM superfamily FX988_RS08035 PF01757 Acyltransferase family FX988_RS08065 PF00535 Glycosyl transferase family 2 FX988_RS08075 PF00132 Bacterial transferase hexapeptide (six repeats) FX988_RS08085 PF00534 Glycosyl transferases group 1 FX988_RS08090 PF00534 Glycosyl transferases group 1 FX988_RS08100 PF13439 Glycosyltransferase Family 4 FX988_RS08100 PF00534 Glycosyl transferases group 1 FX988_RS08105 PF01757 Acyltransferase family FX988_RS08135 PF03707 Bacterial signalling protein N terminal repeat FX988_RS08135 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS08135 PF00563 EAL domain FX988_RS08165 PF13614 AAA domain FX988_RS08165 PF13807 G-rich domain on putative tyrosine kinase FX988_RS08165 PF02706 Chain length determinant protein FX988_RS08180 PF02397 Bacterial sugar transferase FX988_RS08185 PF01270 Glycosyl hydrolases family 8 FX988_RS08195 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS08195 PF13192 Thioredoxin domain FX988_RS08200 PF10417 C-terminal domain of 1-Cys peroxiredoxin FX988_RS08200 PF00578 AhpC/TSA family FX988_RS08210 PF03544 Gram-negative bacterial TonB protein C-terminal FX988_RS08215 PF02472 Biopolymer transport protein ExbD/TolR FX988_RS08220 PF01618 MotA/TolQ/ExbB proton channel family FX988_RS08225 PF01618 MotA/TolQ/ExbB proton channel family FX988_RS08235 PF00593 TonB dependent receptor FX988_RS08235 PF07715 TonB-dependent Receptor Plug Domain FX988_RS08240 PF03239 Iron permease FTR1 family FX988_RS08265 PF11808 Phosphate regulon sensor protein PhoR FX988_RS08265 PF00989 PAS fold FX988_RS08265 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS08270 PF00072 Response regulator receiver domain FX988_RS08270 PF00486 Transcriptional regulatory protein, C terminal FX988_RS08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS08275 PF00497 Bacterial extracellular solute-binding proteins, family 3 FX988_RS08275 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS08280 PF04381 Putative exonuclease, RdgC FX988_RS08295 PF03707 Bacterial signalling protein N terminal repeat FX988_RS08295 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS08295 PF13188 PAS domain FX988_RS08295 PF00563 EAL domain FX988_RS08300 PF01230 HIT domain FX988_RS08305 PF02673 Bacitracin resistance protein BacA FX988_RS08310 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FX988_RS08315 PF02152 Dihydroneopterin aldolase FX988_RS08320 PF02660 Glycerol-3-phosphate acyltransferase FX988_RS08325 PF00814 Glycoprotease family FX988_RS08330 PF01165 Ribosomal protein S21 FX988_RS08335 PF09424 Yqey-like protein FX988_RS08340 PF08278 DNA primase DnaG DnaB-binding FX988_RS08340 PF01807 CHC2 zinc finger FX988_RS08340 PF08275 DNA primase catalytic core, N-terminal domain FX988_RS08340 PF10410 DnaB-helicase binding domain of primase FX988_RS08345 PF00140 Sigma-70 factor, region 1.2 FX988_RS08345 PF03979 Sigma-70 factor, region 1.1 FX988_RS08345 PF04542 Sigma-70 region 2 FX988_RS08345 PF04545 Sigma-70, region 4 FX988_RS08345 PF04546 Sigma-70, non-essential region FX988_RS08345 PF04539 Sigma-70 region 3 FX988_RS08350 PF00873 AcrB/AcrD/AcrF family FX988_RS08355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FX988_RS08360 PF04231 Endonuclease I FX988_RS08370 PF06877 Regulator of ribonuclease activity B FX988_RS08375 PF01553 Acyltransferase FX988_RS08380 PF01966 HD domain FX988_RS08385 PF02954 Bacterial regulatory protein, Fis family FX988_RS08385 PF00158 Sigma-54 interaction domain FX988_RS08385 PF00072 Response regulator receiver domain FX988_RS08390 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS08390 PF00989 PAS fold FX988_RS08400 PF03951 Glutamine synthetase, beta-Grasp domain FX988_RS08400 PF00120 Glutamine synthetase, catalytic domain FX988_RS08415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FX988_RS08420 PF00221 Aromatic amino acid lyase FX988_RS08430 PF07702 UTRA domain FX988_RS08430 PF00392 Bacterial regulatory proteins, gntR family FX988_RS08435 PF01979 Amidohydrolase family FX988_RS08440 PF00491 Arginase family FX988_RS08445 PF00881 Nitroreductase family FX988_RS08485 PF01196 Ribosomal protein L17 FX988_RS08490 PF01000 RNA polymerase Rpb3/RpoA insert domain FX988_RS08490 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FX988_RS08490 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FX988_RS08495 PF00163 Ribosomal protein S4/S9 N-terminal domain FX988_RS08495 PF01479 S4 domain FX988_RS08500 PF00411 Ribosomal protein S11 FX988_RS08505 PF00416 Ribosomal protein S13/S18 FX988_RS08510 PF00444 Ribosomal protein L36 FX988_RS08515 PF00344 SecY translocase FX988_RS08520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FX988_RS08525 PF00327 Ribosomal protein L30p/L7e FX988_RS08530 PF00333 Ribosomal protein S5, N-terminal domain FX988_RS08530 PF03719 Ribosomal protein S5, C-terminal domain FX988_RS08535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FX988_RS08540 PF00347 Ribosomal protein L6 FX988_RS08545 PF00410 Ribosomal protein S8 FX988_RS08550 PF00253 Ribosomal protein S14p/S29e FX988_RS08555 PF00281 Ribosomal protein L5 FX988_RS08555 PF00673 ribosomal L5P family C-terminus FX988_RS08560 PF00467 KOW motif FX988_RS08560 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FX988_RS08565 PF00238 Ribosomal protein L14p/L23e FX988_RS08570 PF00501 AMP-binding enzyme FX988_RS08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS08575 PF03466 LysR substrate binding domain FX988_RS08585 PF00588 SpoU rRNA Methylase family FX988_RS08585 PF08032 RNA 2'-O ribose methyltransferase substrate binding FX988_RS08590 PF17876 Cold shock domain FX988_RS08590 PF00575 S1 RNA binding domain FX988_RS08590 PF08206 Ribonuclease B OB domain FX988_RS08590 PF00773 RNB domain FX988_RS08590 PF08461 Ribonuclease R winged-helix domain FX988_RS08595 PF08238 Sel1 repeat FX988_RS08605 PF00970 Oxidoreductase FAD-binding domain FX988_RS08605 PF00175 Oxidoreductase NAD-binding domain FX988_RS08610 PF00588 SpoU rRNA Methylase family FX988_RS08615 PF12146 Serine aminopeptidase, S33 FX988_RS08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS08620 PF16527 Two-component sensor protein CpxA, periplasmic domain FX988_RS08620 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS08620 PF00672 HAMP domain FX988_RS08625 PF00072 Response regulator receiver domain FX988_RS08625 PF00486 Transcriptional regulatory protein, C terminal FX988_RS08635 PF02142 MGS-like domain FX988_RS08645 PF07687 Peptidase dimerisation domain FX988_RS08645 PF01546 Peptidase family M20/M25/M40 FX988_RS08650 PF01118 Semialdehyde dehydrogenase, NAD binding domain FX988_RS08650 PF02774 Semialdehyde dehydrogenase, dimerisation domain FX988_RS08655 PF00696 Amino acid kinase family FX988_RS08660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FX988_RS08660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FX988_RS08665 PF00764 Arginosuccinate synthase FX988_RS08670 PF14698 Argininosuccinate lyase C-terminal FX988_RS08670 PF00206 Lyase FX988_RS08675 PF00696 Amino acid kinase family FX988_RS08675 PF00583 Acetyltransferase (GNAT) family FX988_RS08690 PF01081 KDPG and KHG aldolase FX988_RS08695 PF02685 Glucokinase FX988_RS08700 PF00920 Dehydratase family FX988_RS08705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FX988_RS08710 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FX988_RS08710 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FX988_RS08715 PF01380 SIS domain FX988_RS08715 PF01418 Helix-turn-helix domain, rpiR family FX988_RS08720 PF02887 Pyruvate kinase, alpha/beta domain FX988_RS08720 PF00224 Pyruvate kinase, barrel domain FX988_RS08725 PF03435 Saccharopine dehydrogenase NADP binding domain FX988_RS08750 PF00069 Protein kinase domain FX988_RS08750 PF03793 PASTA domain FX988_RS08775 PF13230 Glutamine amidotransferases class-II FX988_RS08800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FX988_RS08800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FX988_RS08805 PF00378 Enoyl-CoA hydratase/isomerase FX988_RS08810 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS08810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS08810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS08815 PF00171 Aldehyde dehydrogenase family FX988_RS08835 PF07715 TonB-dependent Receptor Plug Domain FX988_RS08835 PF07660 Secretin and TonB N terminus short domain FX988_RS08835 PF00593 TonB dependent receptor FX988_RS08840 PF00593 TonB dependent receptor FX988_RS08840 PF07715 TonB-dependent Receptor Plug Domain FX988_RS08855 PF03776 Septum formation topological specificity factor MinE FX988_RS08860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FX988_RS08865 PF03775 Septum formation inhibitor MinC, C-terminal domain FX988_RS08865 PF05209 Septum formation inhibitor MinC, N-terminal domain FX988_RS08870 PF00106 short chain dehydrogenase FX988_RS08875 PF00106 short chain dehydrogenase FX988_RS08880 PF01063 Amino-transferase class IV FX988_RS08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS08900 PF00672 HAMP domain FX988_RS08900 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS08905 PF00072 Response regulator receiver domain FX988_RS08905 PF00486 Transcriptional regulatory protein, C terminal FX988_RS08910 PF14497 Glutathione S-transferase, C-terminal domain FX988_RS08910 PF02798 Glutathione S-transferase, N-terminal domain FX988_RS08920 PF04209 homogentisate 1,2-dioxygenase FX988_RS08925 PF00474 Sodium:solute symporter family FX988_RS08935 PF00884 Sulfatase FX988_RS08940 PF00884 Sulfatase FX988_RS08945 PF07715 TonB-dependent Receptor Plug Domain FX988_RS08945 PF00593 TonB dependent receptor FX988_RS08950 PF03466 LysR substrate binding domain FX988_RS08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS08960 PF08267 Cobalamin-independent synthase, N-terminal domain FX988_RS08960 PF01717 Cobalamin-independent synthase, Catalytic domain FX988_RS08975 PF01594 AI-2E family transporter FX988_RS08985 PF07944 Beta-L-arabinofuranosidase, GH127 FX988_RS09020 PF13495 Phage integrase, N-terminal SAM-like domain FX988_RS09020 PF00589 Phage integrase family FX988_RS09025 PF07729 FCD domain FX988_RS09025 PF00392 Bacterial regulatory proteins, gntR family FX988_RS09030 PF00083 Sugar (and other) transporter FX988_RS09035 PF01081 KDPG and KHG aldolase FX988_RS09040 PF05035 2-keto-3-deoxy-galactonokinase FX988_RS09045 PF13378 Enolase C-terminal domain-like FX988_RS09045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FX988_RS09050 PF00171 Aldehyde dehydrogenase family FX988_RS09055 PF16385 Domain of unknown function FX988_RS09055 PF00884 Sulfatase FX988_RS09060 PF07729 FCD domain FX988_RS09060 PF00392 Bacterial regulatory proteins, gntR family FX988_RS09070 PF00884 Sulfatase FX988_RS09075 PF00884 Sulfatase FX988_RS09075 PF16347 Domain of unknown function (DUF4976) FX988_RS09105 PF00722 Glycosyl hydrolases family 16 FX988_RS09140 PF07690 Major Facilitator Superfamily FX988_RS09145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FX988_RS09145 PF13378 Enolase C-terminal domain-like FX988_RS09150 PF16385 Domain of unknown function FX988_RS09150 PF00884 Sulfatase FX988_RS09165 PF13419 Haloacid dehalogenase-like hydrolase FX988_RS09170 PF02445 Quinolinate synthetase A protein FX988_RS09180 PF07719 Tetratricopeptide repeat FX988_RS09180 PF13181 Tetratricopeptide repeat FX988_RS09185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FX988_RS09210 PF00593 TonB dependent receptor FX988_RS09210 PF07715 TonB-dependent Receptor Plug Domain FX988_RS09235 PF00012 Hsp70 protein FX988_RS09240 PF00881 Nitroreductase family FX988_RS09250 PF08125 Mannitol dehydrogenase C-terminal domain FX988_RS09250 PF01232 Mannitol dehydrogenase Rossmann domain FX988_RS09265 PF01751 Toprim domain FX988_RS09265 PF01131 DNA topoisomerase FX988_RS09275 PF00326 Prolyl oligopeptidase family FX988_RS09280 PF03960 ArsC family FX988_RS09285 PF00892 EamA-like transporter family FX988_RS09290 PF12833 Helix-turn-helix domain FX988_RS09295 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FX988_RS09305 PF03480 Bacterial extracellular solute-binding protein, family 7 FX988_RS09320 PF13181 Tetratricopeptide repeat FX988_RS09325 PF07715 TonB-dependent Receptor Plug Domain FX988_RS09325 PF00593 TonB dependent receptor FX988_RS09330 PF00924 Mechanosensitive ion channel FX988_RS09330 PF05552 Conserved TM helix FX988_RS09340 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FX988_RS09345 PF00924 Mechanosensitive ion channel FX988_RS09345 PF12795 Mechanosensitive ion channel porin domain FX988_RS09345 PF12794 Mechanosensitive ion channel inner membrane domain 1 FX988_RS09360 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS09360 PF01590 GAF domain FX988_RS09360 PF00563 EAL domain FX988_RS09360 PF00360 Phytochrome region FX988_RS09390 PF16653 Saccharopine dehydrogenase C-terminal domain FX988_RS09390 PF03435 Saccharopine dehydrogenase NADP binding domain FX988_RS09395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FX988_RS09400 PF01641 SelR domain FX988_RS09400 PF01625 Peptide methionine sulfoxide reductase FX988_RS09405 PF07690 Major Facilitator Superfamily FX988_RS09410 PF13533 Biotin-lipoyl like FX988_RS09415 PF00440 Bacterial regulatory proteins, tetR family FX988_RS09420 PF02566 OsmC-like protein FX988_RS09435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FX988_RS09440 PF00873 AcrB/AcrD/AcrF family FX988_RS09445 PF12706 Beta-lactamase superfamily domain FX988_RS09455 PF00563 EAL domain FX988_RS09455 PF05231 MASE1 FX988_RS09455 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS09455 PF08447 PAS fold FX988_RS09455 PF13426 PAS domain FX988_RS09455 PF08448 PAS fold FX988_RS09465 PF03949 Malic enzyme, NAD binding domain FX988_RS09465 PF00390 Malic enzyme, N-terminal domain FX988_RS09470 PF00905 Penicillin binding protein transpeptidase domain FX988_RS09470 PF17092 Penicillin-binding protein OB-like domain FX988_RS09470 PF00912 Transglycosylase FX988_RS09495 PF07660 Secretin and TonB N terminus short domain FX988_RS09495 PF03958 Bacterial type II/III secretion system short domain FX988_RS09495 PF11741 AMIN domain FX988_RS09495 PF00263 Bacterial type II and III secretion system protein FX988_RS09500 PF01202 Shikimate kinase FX988_RS09505 PF01761 3-dehydroquinate synthase FX988_RS09515 PF02086 D12 class N6 adenine-specific DNA methyltransferase FX988_RS09535 PF00834 Ribulose-phosphate 3 epimerase family FX988_RS09540 PF00579 tRNA synthetases class I (W and Y) FX988_RS09545 PF12833 Helix-turn-helix domain FX988_RS09550 PF12806 Acetyl-CoA dehydrogenase C-terminal like FX988_RS09550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS09550 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS09550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS09555 PF00766 Electron transfer flavoprotein FAD-binding domain FX988_RS09555 PF01012 Electron transfer flavoprotein domain FX988_RS09560 PF01012 Electron transfer flavoprotein domain FX988_RS09565 PF00117 Glutamine amidotransferase class-I FX988_RS09575 PF00202 Aminotransferase class-III FX988_RS09580 PF04958 Arginine N-succinyltransferase beta subunit FX988_RS09585 PF00171 Aldehyde dehydrogenase family FX988_RS09590 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FX988_RS09590 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FX988_RS09595 PF10509 Galactokinase galactose-binding signature FX988_RS09595 PF08544 GHMP kinases C terminal FX988_RS09595 PF00288 GHMP kinases N terminal domain FX988_RS09600 PF00892 EamA-like transporter family FX988_RS09605 PF03448 MgtE intracellular N domain FX988_RS09605 PF01769 Divalent cation transporter FX988_RS09605 PF00571 CBS domain FX988_RS09615 PF00082 Subtilase family FX988_RS09615 PF05922 Peptidase inhibitor I9 FX988_RS09620 PF00909 Ammonium Transporter Family FX988_RS09625 PF03466 LysR substrate binding domain FX988_RS09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS09630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS09630 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS09630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS09645 PF00106 short chain dehydrogenase FX988_RS09655 PF01758 Sodium Bile acid symporter family FX988_RS09660 PF03594 Benzoate membrane transport protein FX988_RS09670 PF03707 Bacterial signalling protein N terminal repeat FX988_RS09670 PF00563 EAL domain FX988_RS09670 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS09675 PF00265 Thymidine kinase FX988_RS09680 PF10369 Small subunit of acetolactate synthase FX988_RS09685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FX988_RS09685 PF00205 Thiamine pyrophosphate enzyme, central domain FX988_RS09685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FX988_RS09710 PF00873 AcrB/AcrD/AcrF family FX988_RS09715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FX988_RS09720 PF00270 DEAD/DEAH box helicase FX988_RS09720 PF00271 Helicase conserved C-terminal domain FX988_RS09720 PF00570 HRDC domain FX988_RS09720 PF16124 RecQ zinc-binding FX988_RS09720 PF09382 RQC domain FX988_RS09725 PF01053 Cys/Met metabolism PLP-dependent enzyme FX988_RS09730 PF08448 PAS fold FX988_RS09730 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS09745 PF12697 Alpha/beta hydrolase family FX988_RS09750 PF00999 Sodium/hydrogen exchanger family FX988_RS09760 PF01740 STAS domain FX988_RS09760 PF00916 Sulfate permease family FX988_RS09765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FX988_RS09765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FX988_RS09770 PF00311 Phosphoenolpyruvate carboxylase FX988_RS09775 PF09186 Domain of unknown function (DUF1949) FX988_RS09775 PF01205 Uncharacterized protein family UPF0029 FX988_RS09780 PF02743 Cache domain FX988_RS09780 PF00672 HAMP domain FX988_RS09780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS09785 PF00009 Elongation factor Tu GTP binding domain FX988_RS09785 PF03143 Elongation factor Tu C-terminal domain FX988_RS09785 PF03144 Elongation factor Tu domain 2 FX988_RS09790 PF00009 Elongation factor Tu GTP binding domain FX988_RS09790 PF03764 Elongation factor G, domain IV FX988_RS09790 PF14492 Elongation Factor G, domain II FX988_RS09790 PF00679 Elongation factor G C-terminus FX988_RS09790 PF03144 Elongation factor Tu domain 2 FX988_RS09795 PF00177 Ribosomal protein S7p/S5e FX988_RS09800 PF00164 Ribosomal protein S12/S23 FX988_RS09805 PF04998 RNA polymerase Rpb1, domain 5 FX988_RS09805 PF04997 RNA polymerase Rpb1, domain 1 FX988_RS09805 PF00623 RNA polymerase Rpb1, domain 2 FX988_RS09805 PF05000 RNA polymerase Rpb1, domain 4 FX988_RS09805 PF04983 RNA polymerase Rpb1, domain 3 FX988_RS09810 PF10385 RNA polymerase beta subunit external 1 domain FX988_RS09810 PF04560 RNA polymerase Rpb2, domain 7 FX988_RS09810 PF00562 RNA polymerase Rpb2, domain 6 FX988_RS09810 PF04561 RNA polymerase Rpb2, domain 2 FX988_RS09810 PF04563 RNA polymerase beta subunit FX988_RS09810 PF04565 RNA polymerase Rpb2, domain 3 FX988_RS09815 PF00542 Ribosomal protein L7/L12 C-terminal domain FX988_RS09815 PF16320 Ribosomal protein L7/L12 dimerisation domain FX988_RS09820 PF00466 Ribosomal protein L10 FX988_RS09825 PF00687 Ribosomal protein L1p/L10e family FX988_RS09830 PF03946 Ribosomal protein L11, N-terminal domain FX988_RS09830 PF00298 Ribosomal protein L11, RNA binding domain FX988_RS09835 PF00467 KOW motif FX988_RS09835 PF02357 Transcription termination factor nusG FX988_RS09840 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FX988_RS09850 PF00664 ABC transporter transmembrane region FX988_RS09850 PF00005 ABC transporter FX988_RS09855 PF03737 Aldolase/RraA FX988_RS09870 PF00271 Helicase conserved C-terminal domain FX988_RS09870 PF00270 DEAD/DEAH box helicase FX988_RS09870 PF03880 DbpA RNA binding domain FX988_RS09890 PF01979 Amidohydrolase family FX988_RS09900 PF03831 PhnA domain FX988_RS09900 PF08274 PhnA Zinc-Ribbon FX988_RS09910 PF08212 Lipocalin-like domain FX988_RS09920 PF01223 DNA/RNA non-specific endonuclease FX988_RS09925 PF00381 PTS HPr component phosphorylation site FX988_RS09930 PF03668 P-loop ATPase protein family FX988_RS09935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FX988_RS09940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FX988_RS09945 PF00309 Sigma-54 factor, Activator interacting domain (AID) FX988_RS09945 PF04552 Sigma-54, DNA binding domain FX988_RS09945 PF04963 Sigma-54 factor, core binding domain FX988_RS09950 PF00005 ABC transporter FX988_RS09950 PF12399 Branched-chain amino acid ATP-binding cassette transporter FX988_RS09970 PF01380 SIS domain FX988_RS09970 PF00571 CBS domain FX988_RS09975 PF01699 Sodium/calcium exchanger protein FX988_RS09980 PF00005 ABC transporter FX988_RS09985 PF02405 Permease MlaE FX988_RS09990 PF02470 MlaD protein FX988_RS09995 PF05494 MlaC protein FX988_RS10005 PF01722 BolA-like protein FX988_RS10010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FX988_RS10015 PF13180 PDZ domain FX988_RS10020 PF13180 PDZ domain FX988_RS10020 PF00595 PDZ domain FX988_RS10030 PF03969 AFG1-like ATPase FX988_RS10035 PF01709 Transcriptional regulator FX988_RS10040 PF01048 Phosphorylase superfamily FX988_RS10045 PF01227 GTP cyclohydrolase I FX988_RS10055 PF00654 Voltage gated chloride channel FX988_RS10065 PF01521 Iron-sulphur cluster biosynthesis FX988_RS10090 PF00056 lactate/malate dehydrogenase, NAD binding domain FX988_RS10090 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FX988_RS10095 PF01316 Arginine repressor, DNA binding domain FX988_RS10095 PF02863 Arginine repressor, C-terminal domain FX988_RS10105 PF00593 TonB dependent receptor FX988_RS10120 PF00485 Phosphoribulokinase / Uridine kinase family FX988_RS10125 PF01773 Na+ dependent nucleoside transporter N-terminus FX988_RS10125 PF07670 Nucleoside recognition FX988_RS10125 PF07662 Na+ dependent nucleoside transporter C-terminus FX988_RS10145 PF01380 SIS domain FX988_RS10145 PF00571 CBS domain FX988_RS10150 PF00563 EAL domain FX988_RS10150 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS10150 PF13426 PAS domain FX988_RS10160 PF00474 Sodium:solute symporter family FX988_RS10170 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS10170 PF09456 RcsC Alpha-Beta-Loop (ABL) FX988_RS10170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS10170 PF00072 Response regulator receiver domain FX988_RS10175 PF00072 Response regulator receiver domain FX988_RS10175 PF00196 Bacterial regulatory proteins, luxR family FX988_RS10180 PF00501 AMP-binding enzyme FX988_RS10180 PF16177 Acetyl-coenzyme A synthetase N-terminus FX988_RS10180 PF13193 AMP-binding enzyme C-terminal domain FX988_RS10190 PF01048 Phosphorylase superfamily FX988_RS10210 PF00579 tRNA synthetases class I (W and Y) FX988_RS10215 PF04225 Opacity-associated protein A LysM-like domain FX988_RS10215 PF01551 Peptidase family M23 FX988_RS10220 PF01037 Lrp/AsnC ligand binding domain FX988_RS10230 PF00135 Carboxylesterase family FX988_RS10235 PF03989 DNA gyrase C-terminal domain, beta-propeller FX988_RS10235 PF00521 DNA gyrase/topoisomerase IV, subunit A FX988_RS10240 PF07995 Glucose / Sorbosone dehydrogenase FX988_RS10245 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FX988_RS10245 PF00072 Response regulator receiver domain FX988_RS10245 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS10245 PF01627 Hpt domain FX988_RS10245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS10245 PF00672 HAMP domain FX988_RS10280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FX988_RS10285 PF01810 LysE type translocator FX988_RS10290 PF01037 Lrp/AsnC ligand binding domain FX988_RS10310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FX988_RS10310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FX988_RS10315 PF00202 Aminotransferase class-III FX988_RS10320 PF00672 HAMP domain FX988_RS10320 PF00211 Adenylate and Guanylate cyclase catalytic domain FX988_RS10325 PF04261 Dyp-type peroxidase family FX988_RS10340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS10340 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS10345 PF00072 Response regulator receiver domain FX988_RS10350 PF00909 Ammonium Transporter Family FX988_RS10355 PF00543 Nitrogen regulatory protein P-II FX988_RS10365 PF00912 Transglycosylase FX988_RS10365 PF00905 Penicillin binding protein transpeptidase domain FX988_RS10365 PF14814 Bifunctional transglycosylase second domain FX988_RS10370 PF00270 DEAD/DEAH box helicase FX988_RS10370 PF04408 Helicase associated domain (HA2) FX988_RS10370 PF00271 Helicase conserved C-terminal domain FX988_RS10370 PF08482 ATP-dependent helicase C-terminal FX988_RS10375 PF02834 LigT like Phosphoesterase FX988_RS10380 PF00551 Formyl transferase FX988_RS10380 PF01842 ACT domain FX988_RS10400 PF04403 Paraquat-inducible protein A FX988_RS10405 PF06628 Catalase-related immune-responsive FX988_RS10405 PF00199 Catalase FX988_RS10430 PF00366 Ribosomal protein S17 FX988_RS10435 PF00831 Ribosomal L29 protein FX988_RS10440 PF00252 Ribosomal protein L16p/L10e FX988_RS10445 PF07650 KH domain FX988_RS10445 PF00189 Ribosomal protein S3, C-terminal domain FX988_RS10450 PF00237 Ribosomal protein L22p/L17e FX988_RS10455 PF00203 Ribosomal protein S19 FX988_RS10460 PF03947 Ribosomal Proteins L2, C-terminal domain FX988_RS10460 PF00181 Ribosomal Proteins L2, RNA binding domain FX988_RS10465 PF00276 Ribosomal protein L23 FX988_RS10470 PF00573 Ribosomal protein L4/L1 family FX988_RS10475 PF00297 Ribosomal protein L3 FX988_RS10480 PF00338 Ribosomal protein S10p/S20e FX988_RS10485 PF00437 Type II/IV secretion system protein FX988_RS10490 PF01979 Amidohydrolase family FX988_RS10495 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS10500 PF03764 Elongation factor G, domain IV FX988_RS10500 PF00679 Elongation factor G C-terminus FX988_RS10500 PF00009 Elongation factor Tu GTP binding domain FX988_RS10500 PF03144 Elongation factor Tu domain 2 FX988_RS10500 PF14492 Elongation Factor G, domain II FX988_RS10510 PF00753 Metallo-beta-lactamase superfamily FX988_RS10520 PF11799 impB/mucB/samB family C-terminal domain FX988_RS10520 PF00817 impB/mucB/samB family FX988_RS10520 PF11798 IMS family HHH motif FX988_RS10525 PF04400 (Na+)-NQR maturation NqrM FX988_RS10530 PF02424 ApbE family FX988_RS10535 PF00111 2Fe-2S iron-sulfur cluster binding domain FX988_RS10535 PF00970 Oxidoreductase FAD-binding domain FX988_RS10535 PF00175 Oxidoreductase NAD-binding domain FX988_RS10540 PF02508 Rnf-Nqr subunit, membrane protein FX988_RS10545 PF02508 Rnf-Nqr subunit, membrane protein FX988_RS10550 PF04205 FMN-binding domain FX988_RS10555 PF03116 NQR2, RnfD, RnfE family FX988_RS10560 PF11973 NQRA C-terminal domain FX988_RS10560 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FX988_RS10565 PF07055 Enoyl reductase FAD binding domain FX988_RS10565 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FX988_RS10565 PF12241 Trans-2-enoyl-CoA reductase catalytic region FX988_RS10570 PF01679 Proteolipid membrane potential modulator FX988_RS10575 PF01722 BolA-like protein FX988_RS10580 PF13532 2OG-Fe(II) oxygenase superfamily FX988_RS10585 PF05175 Methyltransferase small domain FX988_RS10590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FX988_RS10605 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS10610 PF00152 tRNA synthetases class II (D, K and N) FX988_RS10620 PF04055 Radical SAM superfamily FX988_RS10635 PF00893 Small Multidrug Resistance protein FX988_RS10645 PF00986 DNA gyrase B subunit, carboxyl terminus FX988_RS10645 PF00204 DNA gyrase B FX988_RS10645 PF01751 Toprim domain FX988_RS10645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS10650 PF05728 Uncharacterised protein family (UPF0227) FX988_RS10655 PF00149 Calcineurin-like phosphoesterase FX988_RS10660 PF06853 Protein of unknown function (DUF1249) FX988_RS10665 PF00293 NUDIX domain FX988_RS10670 PF02321 Outer membrane efflux protein FX988_RS10680 PF11953 Domain of unknown function (DUF3470) FX988_RS10680 PF00037 4Fe-4S binding domain FX988_RS10690 PF03061 Thioesterase superfamily FX988_RS10695 PF00465 Iron-containing alcohol dehydrogenase FX988_RS10705 PF00085 Thioredoxin FX988_RS10715 PF00270 DEAD/DEAH box helicase FX988_RS10715 PF03880 DbpA RNA binding domain FX988_RS10715 PF00271 Helicase conserved C-terminal domain FX988_RS10720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FX988_RS10720 PF10414 Sirohaem synthase dimerisation region FX988_RS10730 PF00175 Oxidoreductase NAD-binding domain FX988_RS10730 PF00970 Oxidoreductase FAD-binding domain FX988_RS10735 PF07715 TonB-dependent Receptor Plug Domain FX988_RS10735 PF00593 TonB dependent receptor FX988_RS10750 PF00266 Aminotransferase class-V FX988_RS10755 PF03301 Tryptophan 2,3-dioxygenase FX988_RS10760 PF01037 Lrp/AsnC ligand binding domain FX988_RS10770 PF02594 Uncharacterised ACR, YggU family COG1872 FX988_RS10780 PF00158 Sigma-54 interaction domain FX988_RS10780 PF01590 GAF domain FX988_RS10780 PF02954 Bacterial regulatory protein, Fis family FX988_RS10785 PF02779 Transketolase, pyrimidine binding domain FX988_RS10785 PF02780 Transketolase, C-terminal domain FX988_RS10790 PF00676 Dehydrogenase E1 component FX988_RS10795 PF05199 GMC oxidoreductase FX988_RS10795 PF00732 GMC oxidoreductase FX988_RS10810 PF02817 e3 binding domain FX988_RS10810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FX988_RS10810 PF00364 Biotin-requiring enzyme FX988_RS10815 PF02817 e3 binding domain FX988_RS10815 PF00364 Biotin-requiring enzyme FX988_RS10815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FX988_RS10830 PF04389 Peptidase family M28 FX988_RS10835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FX988_RS10840 PF00873 AcrB/AcrD/AcrF family FX988_RS10845 PF00400 WD domain, G-beta repeat FX988_RS10845 PF12894 Anaphase-promoting complex subunit 4 WD40 domain FX988_RS10885 PF00563 EAL domain FX988_RS10885 PF01590 GAF domain FX988_RS10885 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS10885 PF00360 Phytochrome region FX988_RS10900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FX988_RS10900 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS10910 PF13416 Bacterial extracellular solute-binding protein FX988_RS10915 PF00528 Binding-protein-dependent transport system inner membrane component FX988_RS10920 PF12857 TOBE-like domain FX988_RS10920 PF00005 ABC transporter FX988_RS10925 PF01066 CDP-alcohol phosphatidyltransferase FX988_RS10950 PF03061 Thioesterase superfamily FX988_RS10960 PF00128 Alpha amylase, catalytic domain FX988_RS10980 PF01435 Peptidase family M48 FX988_RS10995 PF08534 Redoxin FX988_RS10995 PF00462 Glutaredoxin FX988_RS11000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FX988_RS11005 PF04445 Putative SAM-dependent methyltransferase FX988_RS11010 PF00271 Helicase conserved C-terminal domain FX988_RS11010 PF17191 RecG wedge domain FX988_RS11010 PF00270 DEAD/DEAH box helicase FX988_RS11020 PF00588 SpoU rRNA Methylase family FX988_RS11020 PF12105 SpoU, rRNA methylase, C-terminal FX988_RS11025 PF01042 Endoribonuclease L-PSP FX988_RS11030 PF04607 Region found in RelA / SpoT proteins FX988_RS11030 PF02824 TGS domain FX988_RS11030 PF13291 ACT domain FX988_RS11035 PF01192 RNA polymerase Rpb6 FX988_RS11040 PF00625 Guanylate kinase FX988_RS11045 PF01491 Frataxin-like domain FX988_RS11060 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FX988_RS11060 PF03900 Porphobilinogen deaminase, C-terminal domain FX988_RS11065 PF02602 Uroporphyrinogen-III synthase HemD FX988_RS11070 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FX988_RS11080 PF02112 cAMP phosphodiesterases class-II FX988_RS11090 PF13660 Domain of unknown function (DUF4147) FX988_RS11090 PF05161 MOFRL family FX988_RS11095 PF00474 Sodium:solute symporter family FX988_RS11100 PF00593 TonB dependent receptor FX988_RS11100 PF07715 TonB-dependent Receptor Plug Domain FX988_RS11130 PF07804 HipA-like C-terminal domain FX988_RS11130 PF13657 HipA N-terminal domain FX988_RS11150 PF09500 Putative thioesterase (yiiD_Cterm) FX988_RS11150 PF00583 Acetyltransferase (GNAT) family FX988_RS11155 PF02580 D-Tyr-tRNA(Tyr) deacylase FX988_RS11160 PF00561 alpha/beta hydrolase fold FX988_RS11175 PF03631 Virulence factor BrkB FX988_RS11180 PF02219 Methylenetetrahydrofolate reductase FX988_RS11185 PF01340 Met Apo-repressor, MetJ FX988_RS11190 PF02798 Glutathione S-transferase, N-terminal domain FX988_RS11195 PF00034 Cytochrome c FX988_RS11200 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FX988_RS11205 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS11205 PF08448 PAS fold FX988_RS11205 PF00563 EAL domain FX988_RS11210 PF08719 Domain of unknown function (DUF1768) FX988_RS11210 PF00925 GTP cyclohydrolase II FX988_RS11215 PF11737 Protein of unknown function (DUF3300) FX988_RS11225 PF04371 Porphyromonas-type peptidyl-arginine deiminase FX988_RS11230 PF00795 Carbon-nitrogen hydrolase FX988_RS11235 PF00291 Pyridoxal-phosphate dependent enzyme FX988_RS11240 PF08000 Bacterial PH domain FX988_RS11245 PF00326 Prolyl oligopeptidase family FX988_RS11245 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region FX988_RS11255 PF05175 Methyltransferase small domain FX988_RS11265 PF08331 Domain of unknown function (DUF1730) FX988_RS11270 PF01256 Carbohydrate kinase FX988_RS11270 PF03853 YjeF-related protein N-terminus FX988_RS11275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FX988_RS11280 PF01520 N-acetylmuramoyl-L-alanine amidase FX988_RS11285 PF08676 MutL C terminal dimerisation domain FX988_RS11285 PF01119 DNA mismatch repair protein, C-terminal domain FX988_RS11295 PF17209 Hfq protein FX988_RS11300 PF13167 GTP-binding GTPase N-terminal FX988_RS11300 PF01926 50S ribosome-binding GTPase FX988_RS11300 PF16360 GTP-binding GTPase Middle Region FX988_RS11305 PF12221 Bacterial membrane protein N terminal FX988_RS11305 PF01145 SPFH domain / Band 7 family FX988_RS11310 PF01145 SPFH domain / Band 7 family FX988_RS11325 PF02798 Glutathione S-transferase, N-terminal domain FX988_RS11325 PF00043 Glutathione S-transferase, C-terminal domain FX988_RS11335 PF01547 Bacterial extracellular solute-binding protein FX988_RS11345 PF00762 Ferrochelatase FX988_RS11350 PF03806 AbgT putative transporter family FX988_RS11360 PF01389 OmpA-like transmembrane domain FX988_RS11360 PF00691 OmpA family FX988_RS11370 PF03707 Bacterial signalling protein N terminal repeat FX988_RS11370 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS11370 PF00563 EAL domain FX988_RS11375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS11375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS11375 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS11380 PF00248 Aldo/keto reductase family FX988_RS11390 PF03144 Elongation factor Tu domain 2 FX988_RS11390 PF03143 Elongation factor Tu C-terminal domain FX988_RS11390 PF00009 Elongation factor Tu GTP binding domain FX988_RS11415 PF03309 Type III pantothenate kinase FX988_RS11420 PF02237 Biotin protein ligase C terminal domain FX988_RS11420 PF03099 Biotin/lipoate A/B protein ligase family FX988_RS11420 PF08279 HTH domain FX988_RS11425 PF01565 FAD binding domain FX988_RS11425 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FX988_RS11430 PF13614 AAA domain FX988_RS11440 PF02719 Polysaccharide biosynthesis protein FX988_RS11445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FX988_RS11455 PF02397 Bacterial sugar transferase FX988_RS11460 PF13439 Glycosyltransferase Family 4 FX988_RS11460 PF00534 Glycosyl transferases group 1 FX988_RS11465 PF13439 Glycosyltransferase Family 4 FX988_RS11465 PF00534 Glycosyl transferases group 1 FX988_RS11475 PF00534 Glycosyl transferases group 1 FX988_RS11480 PF01943 Polysaccharide biosynthesis protein FX988_RS11485 PF01740 STAS domain FX988_RS11485 PF00916 Sulfate permease family FX988_RS11490 PF00484 Carbonic anhydrase FX988_RS11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS11495 PF03466 LysR substrate binding domain FX988_RS11500 PF01648 4'-phosphopantetheinyl transferase superfamily FX988_RS11515 PF01553 Acyltransferase FX988_RS11520 PF00550 Phosphopantetheine attachment site FX988_RS11525 PF00550 Phosphopantetheine attachment site FX988_RS11535 PF13193 AMP-binding enzyme C-terminal domain FX988_RS11535 PF00501 AMP-binding enzyme FX988_RS11540 PF00535 Glycosyl transferase family 2 FX988_RS11565 PF01494 FAD binding domain FX988_RS11575 PF02801 Beta-ketoacyl synthase, C-terminal domain FX988_RS11575 PF00109 Beta-ketoacyl synthase, N-terminal domain FX988_RS11590 PF02801 Beta-ketoacyl synthase, C-terminal domain FX988_RS11590 PF00109 Beta-ketoacyl synthase, N-terminal domain FX988_RS11625 PF00155 Aminotransferase class I and II FX988_RS11640 PF17820 PDZ domain FX988_RS11640 PF13180 PDZ domain FX988_RS11650 PF01053 Cys/Met metabolism PLP-dependent enzyme FX988_RS11655 PF02566 OsmC-like protein FX988_RS11665 PF01063 Amino-transferase class IV FX988_RS11670 PF00842 Alanine racemase, C-terminal domain FX988_RS11670 PF01168 Alanine racemase, N-terminal domain FX988_RS11675 PF08003 Protein of unknown function (DUF1698) FX988_RS11680 PF13649 Methyltransferase domain FX988_RS11685 PF00072 Response regulator receiver domain FX988_RS11685 PF00196 Bacterial regulatory proteins, luxR family FX988_RS11695 PF05958 tRNA (Uracil-5-)-methyltransferase FX988_RS11700 PF00440 Bacterial regulatory proteins, tetR family FX988_RS11715 PF03167 Uracil DNA glycosylase superfamily FX988_RS11720 PF03707 Bacterial signalling protein N terminal repeat FX988_RS11720 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS11720 PF00563 EAL domain FX988_RS11730 PF01507 Phosphoadenosine phosphosulfate reductase family FX988_RS11735 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FX988_RS11735 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FX988_RS11740 PF00667 FAD binding domain FX988_RS11740 PF00258 Flavodoxin FX988_RS11740 PF00175 Oxidoreductase NAD-binding domain FX988_RS11770 PF04012 PspA/IM30 family FX988_RS11785 PF00501 AMP-binding enzyme FX988_RS11785 PF13193 AMP-binding enzyme C-terminal domain FX988_RS11790 PF14602 Hexapeptide repeat of succinyl-transferase FX988_RS11790 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FX988_RS11790 PF00132 Bacterial transferase hexapeptide (six repeats) FX988_RS11805 PF01207 Dihydrouridine synthase (Dus) FX988_RS11825 PF01553 Acyltransferase FX988_RS11830 PF01553 Acyltransferase FX988_RS11835 PF00924 Mechanosensitive ion channel FX988_RS11850 PF01370 NAD dependent epimerase/dehydratase family FX988_RS11855 PF00209 Sodium:neurotransmitter symporter family FX988_RS11870 PF01625 Peptide methionine sulfoxide reductase FX988_RS11880 PF00703 Glycosyl hydrolases family 2 FX988_RS11880 PF02929 Beta galactosidase small chain FX988_RS11880 PF02837 Glycosyl hydrolases family 2, sugar binding domain FX988_RS11880 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FX988_RS11880 PF16353 Domain of unknown function(DUF4981) FX988_RS11890 PF00258 Flavodoxin FX988_RS11900 PF02472 Biopolymer transport protein ExbD/TolR FX988_RS11905 PF03737 Aldolase/RraA FX988_RS11910 PF01569 PAP2 superfamily FX988_RS11925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FX988_RS11925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FX988_RS11930 PF01678 Diaminopimelate epimerase FX988_RS11940 PF00589 Phage integrase family FX988_RS11940 PF02899 Phage integrase, N-terminal SAM-like domain FX988_RS11945 PF13419 Haloacid dehalogenase-like hydrolase FX988_RS11950 PF06426 Serine acetyltransferase, N-terminal FX988_RS11950 PF00132 Bacterial transferase hexapeptide (six repeats) FX988_RS11955 PF00580 UvrD/REP helicase N-terminal domain FX988_RS11955 PF13361 UvrD-like helicase C-terminal domain FX988_RS11960 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS11960 PF00072 Response regulator receiver domain FX988_RS11965 PF00892 EamA-like transporter family FX988_RS12000 PF00781 Diacylglycerol kinase catalytic domain FX988_RS12000 PF02142 MGS-like domain FX988_RS12010 PF00924 Mechanosensitive ion channel FX988_RS12040 PF00135 Carboxylesterase family FX988_RS12055 PF03466 LysR substrate binding domain FX988_RS12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS12060 PF00085 Thioredoxin FX988_RS12070 PF01207 Dihydrouridine synthase (Dus) FX988_RS12075 PF02954 Bacterial regulatory protein, Fis family FX988_RS12080 PF02142 MGS-like domain FX988_RS12080 PF01808 AICARFT/IMPCHase bienzyme FX988_RS12090 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FX988_RS12090 PF02843 Phosphoribosylglycinamide synthetase, C domain FX988_RS12090 PF02844 Phosphoribosylglycinamide synthetase, N domain FX988_RS12095 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS12095 PF00360 Phytochrome region FX988_RS12095 PF00563 EAL domain FX988_RS12095 PF01590 GAF domain FX988_RS12105 PF07043 Protein of unknown function (DUF1328) FX988_RS12110 PF03448 MgtE intracellular N domain FX988_RS12110 PF00571 CBS domain FX988_RS12110 PF01769 Divalent cation transporter FX988_RS12115 PF04357 TamB, inner membrane protein subunit of TAM complex FX988_RS12120 PF01103 Surface antigen FX988_RS12120 PF17243 POTRA domain TamA domain 1 FX988_RS12140 PF03707 Bacterial signalling protein N terminal repeat FX988_RS12140 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS12140 PF00563 EAL domain FX988_RS12150 PF01152 Bacterial-like globin FX988_RS12155 PF03061 Thioesterase superfamily FX988_RS12160 PF16124 RecQ zinc-binding FX988_RS12160 PF00570 HRDC domain FX988_RS12160 PF00271 Helicase conserved C-terminal domain FX988_RS12160 PF00270 DEAD/DEAH box helicase FX988_RS12160 PF09382 RQC domain FX988_RS12165 PF03796 DnaB-like helicase C terminal domain FX988_RS12165 PF00772 DnaB-like helicase N terminal domain FX988_RS12170 PF00691 OmpA family FX988_RS12175 PF01894 Uncharacterised protein family UPF0047 FX988_RS12185 PF01475 Ferric uptake regulator family FX988_RS12190 PF09297 NADH pyrophosphatase zinc ribbon domain FX988_RS12190 PF00293 NUDIX domain FX988_RS12195 PF01208 Uroporphyrinogen decarboxylase (URO-D) FX988_RS12205 PF01225 Mur ligase family, catalytic domain FX988_RS12205 PF02875 Mur ligase family, glutamate ligase domain FX988_RS12205 PF08245 Mur ligase middle domain FX988_RS12210 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FX988_RS12220 PF04612 Type II secretion system (T2SS), protein M FX988_RS12225 PF12693 GspL periplasmic domain FX988_RS12225 PF05134 Type II secretion system (T2SS), protein L FX988_RS12230 PF03934 Type II secretion system (T2SS), protein K FX988_RS12235 PF11612 Type II secretion system (T2SS), protein J FX988_RS12235 PF07963 Prokaryotic N-terminal methylation motif FX988_RS12240 PF07963 Prokaryotic N-terminal methylation motif FX988_RS12240 PF02501 Type II secretion system (T2SS), protein I FX988_RS12245 PF12019 Type II transport protein GspH FX988_RS12245 PF07963 Prokaryotic N-terminal methylation motif FX988_RS12250 PF08334 Type II secretion system (T2SS), protein G FX988_RS12250 PF07963 Prokaryotic N-terminal methylation motif FX988_RS12255 PF00482 Type II secretion system (T2SS), protein F FX988_RS12260 PF00437 Type II/IV secretion system protein FX988_RS12265 PF00263 Bacterial type II and III secretion system protein FX988_RS12265 PF03958 Bacterial type II/III secretion system short domain FX988_RS12270 PF11356 Type II secretion system protein C FX988_RS12275 PF00106 short chain dehydrogenase FX988_RS12280 PF01479 S4 domain FX988_RS12285 PF01430 Hsp33 protein FX988_RS12290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS12290 PF00672 HAMP domain FX988_RS12290 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS12295 PF00486 Transcriptional regulatory protein, C terminal FX988_RS12295 PF00072 Response regulator receiver domain FX988_RS12300 PF00485 Phosphoribulokinase / Uridine kinase family FX988_RS12330 PF00486 Transcriptional regulatory protein, C terminal FX988_RS12330 PF00072 Response regulator receiver domain FX988_RS12335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS12335 PF18698 Histidine kinase sensor domain FX988_RS12335 PF00672 HAMP domain FX988_RS12335 PF00989 PAS fold FX988_RS12335 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS12340 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FX988_RS12345 PF00709 Adenylosuccinate synthetase FX988_RS12360 PF00266 Aminotransferase class-V FX988_RS12370 PF03976 Polyphosphate kinase 2 (PPK2) FX988_RS12380 PF08244 Glycosyl hydrolases family 32 C terminal FX988_RS12380 PF00251 Glycosyl hydrolases family 32 N-terminal domain FX988_RS12385 PF00356 Bacterial regulatory proteins, lacI family FX988_RS12390 PF01306 LacY proton/sugar symporter FX988_RS12395 PF01738 Dienelactone hydrolase family FX988_RS12420 PF00593 TonB dependent receptor FX988_RS12420 PF07715 TonB-dependent Receptor Plug Domain FX988_RS12430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS12430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS12430 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS12435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS12435 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS12435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS12440 PF01965 DJ-1/PfpI family FX988_RS12440 PF12833 Helix-turn-helix domain FX988_RS12450 PF17862 AAA+ lid domain FX988_RS12450 PF00004 ATPase family associated with various cellular activities (AAA) FX988_RS12450 PF01434 Peptidase family M41 FX988_RS12455 PF02566 OsmC-like protein FX988_RS12460 PF01047 MarR family FX988_RS12470 PF01156 Inosine-uridine preferring nucleoside hydrolase FX988_RS12485 PF01554 MatE FX988_RS12490 PF00289 Biotin carboxylase, N-terminal domain FX988_RS12490 PF02785 Biotin carboxylase C-terminal domain FX988_RS12490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FX988_RS12495 PF00364 Biotin-requiring enzyme FX988_RS12500 PF01220 Dehydroquinase class II FX988_RS12505 PF04336 Acyl carrier protein phosphodiesterase FX988_RS12520 PF02683 Cytochrome C biogenesis protein transmembrane region FX988_RS12520 PF11412 Disulphide bond corrector protein DsbC FX988_RS12525 PF04186 FxsA cytoplasmic membrane protein FX988_RS12530 PF00072 Response regulator receiver domain FX988_RS12530 PF00486 Transcriptional regulatory protein, C terminal FX988_RS12535 PF00497 Bacterial extracellular solute-binding proteins, family 3 FX988_RS12535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS12535 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS12545 PF00534 Glycosyl transferases group 1 FX988_RS12545 PF08323 Starch synthase catalytic domain FX988_RS12550 PF05175 Methyltransferase small domain FX988_RS12550 PF08468 Methyltransferase small domain N-terminal FX988_RS12555 PF02390 Putative methyltransferase FX988_RS12565 PF14815 NUDIX domain FX988_RS12565 PF00633 Helix-hairpin-helix motif FX988_RS12565 PF00730 HhH-GPD superfamily base excision DNA repair protein FX988_RS12570 PF04362 Bacterial Fe(2+) trafficking FX988_RS12580 PF00561 alpha/beta hydrolase fold FX988_RS12585 PF01068 ATP dependent DNA ligase domain FX988_RS12585 PF14743 DNA ligase OB-like domain FX988_RS12590 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FX988_RS12595 PF03707 Bacterial signalling protein N terminal repeat FX988_RS12595 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS12595 PF00563 EAL domain FX988_RS12600 PF00580 UvrD/REP helicase N-terminal domain FX988_RS12600 PF13361 UvrD-like helicase C-terminal domain FX988_RS12605 PF04380 Membrane fusogenic activity FX988_RS12610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS12610 PF00672 HAMP domain FX988_RS12615 PF01040 UbiA prenyltransferase family FX988_RS12620 PF04345 Chorismate lyase FX988_RS12630 PF01694 Rhomboid family FX988_RS12630 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FX988_RS12635 PF00581 Rhodanese-like domain FX988_RS12640 PF00107 Zinc-binding dehydrogenase FX988_RS12640 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS12645 PF00155 Aminotransferase class I and II FX988_RS12650 PF03707 Bacterial signalling protein N terminal repeat FX988_RS12650 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS12650 PF00563 EAL domain FX988_RS12665 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FX988_RS12670 PF00534 Glycosyl transferases group 1 FX988_RS12685 PF01467 Cytidylyltransferase-like FX988_RS12695 PF06827 Zinc finger found in FPG and IleRS FX988_RS12695 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FX988_RS12695 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FX988_RS12705 PF00471 Ribosomal protein L33 FX988_RS12710 PF00830 Ribosomal L28 family FX988_RS12720 PF04002 RadC-like JAB domain FX988_RS12725 PF02441 Flavoprotein FX988_RS12725 PF04127 DNA / pantothenate metabolism flavoprotein FX988_RS12730 PF00440 Bacterial regulatory proteins, tetR family FX988_RS12740 PF04389 Peptidase family M28 FX988_RS12740 PF02225 PA domain FX988_RS12770 PF02333 Phytase FX988_RS12795 PF00154 recA bacterial DNA recombination protein FX988_RS12805 PF01336 OB-fold nucleic acid binding domain FX988_RS12805 PF02811 PHP domain FX988_RS12805 PF14579 Helix-hairpin-helix motif FX988_RS12805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FX988_RS12805 PF07733 Bacterial DNA polymerase III alpha NTPase domain FX988_RS12840 PF00132 Bacterial transferase hexapeptide (six repeats) FX988_RS12850 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FX988_RS12850 PF01488 Shikimate / quinate 5-dehydrogenase FX988_RS12850 PF08501 Shikimate dehydrogenase substrate binding domain FX988_RS12855 PF03922 OmpW family FX988_RS12865 PF01300 Telomere recombination FX988_RS12870 PF01396 Topoisomerase DNA binding C4 zinc finger FX988_RS12875 PF04361 Protein of unknown function (DUF494) FX988_RS12880 PF02481 DNA recombination-mediator protein A FX988_RS12880 PF17782 DprA winged helix domain FX988_RS12890 PF01327 Polypeptide deformylase FX988_RS12895 PF00551 Formyl transferase FX988_RS12895 PF02911 Formyl transferase, C-terminal domain FX988_RS12900 PF01029 NusB family FX988_RS12900 PF01189 16S rRNA methyltransferase RsmB/F FX988_RS12905 PF02080 TrkA-C domain FX988_RS12905 PF02254 TrkA-N domain FX988_RS12920 PF05818 Enterobacterial TraT complement resistance protein FX988_RS12925 PF02386 Cation transport protein FX988_RS12930 PF00476 DNA polymerase family A FX988_RS12930 PF01612 3'-5' exonuclease FX988_RS12930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FX988_RS12930 PF01367 5'-3' exonuclease, C-terminal SAM fold FX988_RS12940 PF01926 50S ribosome-binding GTPase FX988_RS12945 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FX988_RS12950 PF04220 Der GTPase activator (YihI) FX988_RS12960 PF03352 Methyladenine glycosylase FX988_RS12965 PF02091 Glycyl-tRNA synthetase alpha subunit FX988_RS12970 PF05746 DALR anticodon binding domain FX988_RS12970 PF02092 Glycyl-tRNA synthetase beta subunit FX988_RS12980 PF00563 EAL domain FX988_RS12980 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS12980 PF05231 MASE1 FX988_RS12980 PF08447 PAS fold FX988_RS12980 PF08448 PAS fold FX988_RS12980 PF13426 PAS domain FX988_RS12985 PF01177 Asp/Glu/Hydantoin racemase FX988_RS12990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS12990 PF00204 DNA gyrase B FX988_RS12990 PF00986 DNA gyrase B subunit, carboxyl terminus FX988_RS12990 PF18053 DNA gyrase B subunit insert domain FX988_RS12990 PF01751 Toprim domain FX988_RS12995 PF02463 RecF/RecN/SMC N terminal domain FX988_RS13000 PF02768 DNA polymerase III beta subunit, C-terminal domain FX988_RS13000 PF02767 DNA polymerase III beta subunit, central domain FX988_RS13000 PF00712 DNA polymerase III beta subunit, N-terminal domain FX988_RS13005 PF08299 Bacterial dnaA protein helix-turn-helix FX988_RS13005 PF11638 DnaA N-terminal domain FX988_RS13005 PF00308 Bacterial dnaA protein FX988_RS13010 PF00468 Ribosomal protein L34 FX988_RS13015 PF00825 Ribonuclease P FX988_RS13020 PF01809 Putative membrane protein insertion efficiency factor FX988_RS13025 PF02096 60Kd inner membrane protein FX988_RS13025 PF14849 YidC periplasmic domain FX988_RS13030 PF04461 Protein of unknown function (DUF520) FX988_RS13035 PF01926 50S ribosome-binding GTPase FX988_RS13035 PF12631 MnmE helical domain FX988_RS13035 PF10396 GTP-binding protein TrmE N-terminus FX988_RS13040 PF00258 Flavodoxin FX988_RS13055 PF13932 GidA associated domain FX988_RS13055 PF01134 Glucose inhibited division protein A FX988_RS13060 PF02527 rRNA small subunit methyltransferase G FX988_RS13065 PF13614 AAA domain FX988_RS13070 PF02195 ParB-like nuclease domain FX988_RS13070 PF17762 HTH domain found in ParB protein FX988_RS13075 PF03899 ATP synthase I chain FX988_RS13080 PF00119 ATP synthase A chain FX988_RS13085 PF00137 ATP synthase subunit C FX988_RS13090 PF00430 ATP synthase B/B' CF(0) FX988_RS13095 PF00213 ATP synthase delta (OSCP) subunit FX988_RS13100 PF02874 ATP synthase alpha/beta family, beta-barrel domain FX988_RS13100 PF00306 ATP synthase alpha/beta chain, C terminal domain FX988_RS13100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FX988_RS13105 PF00231 ATP synthase FX988_RS13110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FX988_RS13110 PF02874 ATP synthase alpha/beta family, beta-barrel domain FX988_RS13115 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FX988_RS13115 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FX988_RS13120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS13120 PF18415 Histidine kinase receptor ArcB trans-membrane domain FX988_RS13120 PF01627 Hpt domain FX988_RS13120 PF00989 PAS fold FX988_RS13120 PF00072 Response regulator receiver domain FX988_RS13120 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS13140 PF04820 Tryptophan halogenase FX988_RS13160 PF01966 HD domain FX988_RS13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS13170 PF03466 LysR substrate binding domain FX988_RS13175 PF07690 Major Facilitator Superfamily FX988_RS13185 PF00916 Sulfate permease family FX988_RS13185 PF01740 STAS domain FX988_RS13190 PF03755 YicC-like family, N-terminal region FX988_RS13190 PF08340 Domain of unknown function (DUF1732) FX988_RS13195 PF01138 3' exoribonuclease family, domain 1 FX988_RS13195 PF03725 3' exoribonuclease family, domain 2 FX988_RS13200 PF00156 Phosphoribosyl transferase domain FX988_RS13205 PF01206 Sulfurtransferase TusA FX988_RS13225 PF01979 Amidohydrolase family FX988_RS13240 PF04116 Fatty acid hydroxylase superfamily FX988_RS13250 PF01594 AI-2E family transporter FX988_RS13265 PF00696 Amino acid kinase family FX988_RS13265 PF01472 PUA domain FX988_RS13270 PF00171 Aldehyde dehydrogenase family FX988_RS13275 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS13295 PF07687 Peptidase dimerisation domain FX988_RS13295 PF01546 Peptidase family M20/M25/M40 FX988_RS13300 PF00892 EamA-like transporter family FX988_RS13305 PF07690 Major Facilitator Superfamily FX988_RS13310 PF00691 OmpA family FX988_RS13310 PF05736 OprF membrane domain FX988_RS13320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FX988_RS13320 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FX988_RS13325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS13325 PF03466 LysR substrate binding domain FX988_RS13335 PF01078 Magnesium chelatase, subunit ChlI FX988_RS13335 PF13335 Magnesium chelatase, subunit ChlI C-terminal FX988_RS13340 PF03458 UPF0126 domain FX988_RS13345 PF00920 Dehydratase family FX988_RS13350 PF00585 C-terminal regulatory domain of Threonine dehydratase FX988_RS13350 PF00291 Pyridoxal-phosphate dependent enzyme FX988_RS13355 PF01553 Acyltransferase FX988_RS13365 PF03552 Cellulose synthase FX988_RS13365 PF00535 Glycosyl transferase family 2 FX988_RS13365 PF07238 PilZ domain FX988_RS13375 PF01270 Glycosyl hydrolases family 8 FX988_RS13380 PF13181 Tetratricopeptide repeat FX988_RS13380 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FX988_RS13385 PF01726 LexA DNA binding domain FX988_RS13385 PF00717 Peptidase S24-like FX988_RS13390 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FX988_RS13390 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FX988_RS13395 PF00115 Cytochrome C and Quinol oxidase polypeptide I FX988_RS13405 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FX988_RS13410 PF00510 Cytochrome c oxidase subunit III FX988_RS13430 PF02628 Cytochrome oxidase assembly protein FX988_RS13435 PF01040 UbiA prenyltransferase family FX988_RS13440 PF02630 SCO1/SenC FX988_RS13450 PF01522 Polysaccharide deacetylase FX988_RS13450 PF14883 Hypothetical glycosyl hydrolase family 13 FX988_RS13455 PF01554 MatE FX988_RS13460 PF01106 NifU-like domain FX988_RS13460 PF01521 Iron-sulphur cluster biosynthesis FX988_RS13470 PF00156 Phosphoribosyl transferase domain FX988_RS13475 PF12697 Alpha/beta hydrolase family FX988_RS13495 PF16921 Tex protein YqgF-like domain FX988_RS13495 PF00575 S1 RNA binding domain FX988_RS13495 PF17674 HHH domain FX988_RS13495 PF09371 Tex-like protein N-terminal domain FX988_RS13505 PF03449 Transcription elongation factor, N-terminal FX988_RS13505 PF01272 Transcription elongation factor, GreA/GreB, C-term FX988_RS13510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FX988_RS13510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FX988_RS13520 PF04102 SlyX FX988_RS13530 PF12848 ABC transporter FX988_RS13530 PF00005 ABC transporter FX988_RS13540 PF03466 LysR substrate binding domain FX988_RS13540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS13545 PF03601 Conserved hypothetical protein 698 FX988_RS13555 PF07971 Glycosyl hydrolase family 92 FX988_RS13555 PF17678 Glycosyl hydrolase family 92 N-terminal domain FX988_RS13565 PF07690 Major Facilitator Superfamily FX988_RS13570 PF17678 Glycosyl hydrolase family 92 N-terminal domain FX988_RS13570 PF07971 Glycosyl hydrolase family 92 FX988_RS13575 PF00356 Bacterial regulatory proteins, lacI family FX988_RS13590 PF01869 BadF/BadG/BcrA/BcrD ATPase family FX988_RS13595 PF01112 Asparaginase FX988_RS13615 PF00474 Sodium:solute symporter family FX988_RS13620 PF07971 Glycosyl hydrolase family 92 FX988_RS13620 PF17678 Glycosyl hydrolase family 92 N-terminal domain FX988_RS13625 PF01380 SIS domain FX988_RS13630 PF00561 alpha/beta hydrolase fold FX988_RS13635 PF06794 Uncharacterised protein family (UPF0270) FX988_RS13645 PF00459 Inositol monophosphatase family FX988_RS13650 PF00293 NUDIX domain FX988_RS13655 PF13419 Haloacid dehalogenase-like hydrolase FX988_RS13660 PF00719 Inorganic pyrophosphatase FX988_RS13685 PF17755 UvrA DNA-binding domain FX988_RS13685 PF00005 ABC transporter FX988_RS13685 PF17760 UvrA interaction domain FX988_RS13690 PF07690 Major Facilitator Superfamily FX988_RS13695 PF00436 Single-strand binding protein family FX988_RS13700 PF07715 TonB-dependent Receptor Plug Domain FX988_RS13700 PF00593 TonB dependent receptor FX988_RS13715 PF00171 Aldehyde dehydrogenase family FX988_RS13720 PF00501 AMP-binding enzyme FX988_RS13720 PF13193 AMP-binding enzyme C-terminal domain FX988_RS13725 PF07715 TonB-dependent Receptor Plug Domain FX988_RS13725 PF00593 TonB dependent receptor FX988_RS13735 PF02975 Methylamine dehydrogenase, L chain FX988_RS13740 PF00578 AhpC/TSA family FX988_RS13750 PF06433 Methylamine dehydrogenase heavy chain (MADH) FX988_RS13755 PF00440 Bacterial regulatory proteins, tetR family FX988_RS13755 PF17925 Tetracyclin repressor-like, C-terminal domain FX988_RS13760 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS13760 PF00072 Response regulator receiver domain FX988_RS13770 PF00202 Aminotransferase class-III FX988_RS13775 PF04958 Arginine N-succinyltransferase beta subunit FX988_RS13805 PF03958 Bacterial type II/III secretion system short domain FX988_RS13805 PF00263 Bacterial type II and III secretion system protein FX988_RS13810 PF13401 AAA domain FX988_RS13810 PF01471 Putative peptidoglycan binding domain FX988_RS13820 PF00437 Type II/IV secretion system protein FX988_RS13825 PF00482 Type II secretion system (T2SS), protein F FX988_RS13835 PF07963 Prokaryotic N-terminal methylation motif FX988_RS13835 PF00114 Pilin (bacterial filament) FX988_RS13840 PF08334 Type II secretion system (T2SS), protein G FX988_RS13840 PF07963 Prokaryotic N-terminal methylation motif FX988_RS13875 PF04085 rod shape-determining protein MreC FX988_RS13880 PF04093 rod shape-determining protein MreD FX988_RS13885 PF02545 Maf-like protein FX988_RS13890 PF10150 Ribonuclease E/G family FX988_RS13890 PF00575 S1 RNA binding domain FX988_RS13895 PF13116 Protein of unknown function FX988_RS13895 PF13502 AsmA-like C-terminal region FX988_RS13900 PF00795 Carbon-nitrogen hydrolase FX988_RS13905 PF01523 Putative modulator of DNA gyrase FX988_RS13915 PF04751 Protein of unknown function (DUF615) FX988_RS13920 PF01523 Putative modulator of DNA gyrase FX988_RS13930 PF13417 Glutathione S-transferase, N-terminal domain FX988_RS13940 PF01145 SPFH domain / Band 7 family FX988_RS13945 PF00557 Metallopeptidase family M24 FX988_RS13950 PF01464 Transglycosylase SLT domain FX988_RS13950 PF14718 Soluble lytic murein transglycosylase L domain FX988_RS13955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FX988_RS13955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FX988_RS13955 PF00378 Enoyl-CoA hydratase/isomerase FX988_RS13960 PF02803 Thiolase, C-terminal domain FX988_RS13960 PF00108 Thiolase, N-terminal domain FX988_RS13980 PF02222 ATP-grasp domain FX988_RS13980 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FX988_RS13985 PF00731 AIR carboxylase FX988_RS13990 PF07497 Rho termination factor, RNA-binding domain FX988_RS13990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FX988_RS13990 PF07498 Rho termination factor, N-terminal domain FX988_RS13995 PF00085 Thioredoxin FX988_RS14000 PF00270 DEAD/DEAH box helicase FX988_RS14000 PF00271 Helicase conserved C-terminal domain FX988_RS14005 PF02541 Ppx/GppA phosphatase family FX988_RS14010 PF00490 Delta-aminolevulinic acid dehydratase FX988_RS14015 PF00072 Response regulator receiver domain FX988_RS14015 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS14020 PF01026 TatD related DNase FX988_RS14030 PF00902 Sec-independent protein translocase protein (TatC) FX988_RS14035 PF02416 mttA/Hcf106 family FX988_RS14050 PF03109 ABC1 family FX988_RS14060 PF01209 ubiE/COQ5 methyltransferase family FX988_RS14070 PF01432 Peptidase family M3 FX988_RS14075 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS14075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FX988_RS14085 PF07549 SecD/SecF GG Motif FX988_RS14085 PF02355 Protein export membrane protein FX988_RS14090 PF02355 Protein export membrane protein FX988_RS14090 PF07549 SecD/SecF GG Motif FX988_RS14090 PF13721 SecD export protein N-terminal TM region FX988_RS14100 PF12437 Glutamine synthetase type III N terminal FX988_RS14100 PF00120 Glutamine synthetase, catalytic domain FX988_RS14100 PF18318 Glutamine synthetase C-terminal domain FX988_RS14120 PF06965 Na+/H+ antiporter 1 FX988_RS14145 PF07724 AAA domain (Cdc48 subfamily) FX988_RS14145 PF00004 ATPase family associated with various cellular activities (AAA) FX988_RS14150 PF00227 Proteasome subunit FX988_RS14155 PF05036 Sporulation related domain FX988_RS14160 PF18074 Primosomal protein N C-terminal domain FX988_RS14160 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FX988_RS14160 PF17764 3′ DNA-binding domain (3′BD) FX988_RS14160 PF00271 Helicase conserved C-terminal domain FX988_RS14160 PF00270 DEAD/DEAH box helicase FX988_RS14165 PF01197 Ribosomal protein L31 FX988_RS14170 PF03949 Malic enzyme, NAD binding domain FX988_RS14170 PF00390 Malic enzyme, N-terminal domain FX988_RS14190 PF12729 Four helix bundle sensory module for signal transduction FX988_RS14190 PF00672 HAMP domain FX988_RS14190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS14200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS14200 PF12729 Four helix bundle sensory module for signal transduction FX988_RS14200 PF00672 HAMP domain FX988_RS14205 PF12848 ABC transporter FX988_RS14205 PF00005 ABC transporter FX988_RS14215 PF00563 EAL domain FX988_RS14215 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS14215 PF01590 GAF domain FX988_RS14215 PF00360 Phytochrome region FX988_RS14220 PF02016 LD-carboxypeptidase N-terminal domain FX988_RS14220 PF17676 LD-carboxypeptidase C-terminal domain FX988_RS14225 PF07690 Major Facilitator Superfamily FX988_RS14230 PF01979 Amidohydrolase family FX988_RS14235 PF01380 SIS domain FX988_RS14250 PF00474 Sodium:solute symporter family FX988_RS14255 PF01869 BadF/BadG/BcrA/BcrD ATPase family FX988_RS14260 PF01380 SIS domain FX988_RS14265 PF07075 Protein of unknown function (DUF1343) FX988_RS14275 PF00593 TonB dependent receptor FX988_RS14275 PF07715 TonB-dependent Receptor Plug Domain FX988_RS14280 PF01418 Helix-turn-helix domain, rpiR family FX988_RS14280 PF01380 SIS domain FX988_RS14285 PF13344 Haloacid dehalogenase-like hydrolase FX988_RS14285 PF00293 NUDIX domain FX988_RS14290 PF00933 Glycosyl hydrolase family 3 N terminal domain FX988_RS14300 PF00144 Beta-lactamase FX988_RS14305 PF00144 Beta-lactamase FX988_RS14315 PF00583 Acetyltransferase (GNAT) family FX988_RS14320 PF02954 Bacterial regulatory protein, Fis family FX988_RS14320 PF00158 Sigma-54 interaction domain FX988_RS14320 PF00072 Response regulator receiver domain FX988_RS14330 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS14330 PF01590 GAF domain FX988_RS14330 PF08446 PAS fold FX988_RS14330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS14330 PF00360 Phytochrome region FX988_RS14335 PF00072 Response regulator receiver domain FX988_RS14340 PF00072 Response regulator receiver domain FX988_RS14340 PF09308 LuxQ, periplasmic FX988_RS14340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS14340 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS14365 PF00474 Sodium:solute symporter family FX988_RS14375 PF00171 Aldehyde dehydrogenase family FX988_RS14380 PF06965 Na+/H+ antiporter 1 FX988_RS14395 PF03631 Virulence factor BrkB FX988_RS14400 PF01679 Proteolipid membrane potential modulator FX988_RS14430 PF10011 Predicted membrane protein (DUF2254) FX988_RS14435 PF00248 Aldo/keto reductase family FX988_RS14465 PF07690 Major Facilitator Superfamily FX988_RS14470 PF02321 Outer membrane efflux protein FX988_RS14475 PF00873 AcrB/AcrD/AcrF family FX988_RS14480 PF00529 HlyD membrane-fusion protein of T1SS FX988_RS14480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FX988_RS14485 PF00440 Bacterial regulatory proteins, tetR family FX988_RS14500 PF00294 pfkB family carbohydrate kinase FX988_RS14510 PF13419 Haloacid dehalogenase-like hydrolase FX988_RS14515 PF00005 ABC transporter FX988_RS14515 PF08402 TOBE domain FX988_RS14520 PF00528 Binding-protein-dependent transport system inner membrane component FX988_RS14525 PF00528 Binding-protein-dependent transport system inner membrane component FX988_RS14540 PF00563 EAL domain FX988_RS14540 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS14540 PF03707 Bacterial signalling protein N terminal repeat FX988_RS14570 PF07715 TonB-dependent Receptor Plug Domain FX988_RS14595 PF01396 Topoisomerase DNA binding C4 zinc finger FX988_RS14595 PF01131 DNA topoisomerase FX988_RS14595 PF01751 Toprim domain FX988_RS14630 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS14640 PF02254 TrkA-N domain FX988_RS14640 PF02080 TrkA-C domain FX988_RS14645 PF02386 Cation transport protein FX988_RS14650 PF02028 BCCT, betaine/carnitine/choline family transporter FX988_RS14655 PF00356 Bacterial regulatory proteins, lacI family FX988_RS14660 PF13378 Enolase C-terminal domain-like FX988_RS14660 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FX988_RS14695 PF00664 ABC transporter transmembrane region FX988_RS14695 PF00005 ABC transporter FX988_RS14695 PF03412 Peptidase C39 family FX988_RS14705 PF00593 TonB dependent receptor FX988_RS14705 PF07715 TonB-dependent Receptor Plug Domain FX988_RS14725 PF07683 Cobalamin synthesis protein cobW C-terminal domain FX988_RS14725 PF02492 CobW/HypB/UreG, nucleotide-binding domain FX988_RS14735 PF02649 Type I GTP cyclohydrolase folE2 FX988_RS14760 PF00005 ABC transporter FX988_RS14775 PF00753 Metallo-beta-lactamase superfamily FX988_RS14775 PF16123 Hydroxyacylglutathione hydrolase C-terminus FX988_RS14780 PF07715 TonB-dependent Receptor Plug Domain FX988_RS14780 PF00593 TonB dependent receptor FX988_RS14795 PF04545 Sigma-70, region 4 FX988_RS14795 PF04542 Sigma-70 region 2 FX988_RS14795 PF00140 Sigma-70 factor, region 1.2 FX988_RS14800 PF08668 HDOD domain FX988_RS14800 PF00563 EAL domain FX988_RS14805 PF18075 FtsX extracellular domain FX988_RS14810 PF00005 ABC transporter FX988_RS14815 PF00448 SRP54-type protein, GTPase domain FX988_RS14815 PF02881 SRP54-type protein, helical bundle domain FX988_RS14830 PF01914 MarC family integral membrane protein FX988_RS14840 PF12404 Peptidase FX988_RS14840 PF00883 Cytosol aminopeptidase family, catalytic domain FX988_RS14845 PF03749 Sugar fermentation stimulation protein RE domain FX988_RS14845 PF17746 SfsA N-terminal OB domain FX988_RS14850 PF01258 Prokaryotic dksA/traR C4-type zinc finger FX988_RS14855 PF00749 tRNA synthetases class I (E and Q), catalytic domain FX988_RS14860 PF12627 Probable RNA and SrmB- binding site of polymerase A FX988_RS14860 PF12626 Polymerase A arginine-rich C-terminus FX988_RS14860 PF01743 Poly A polymerase head domain FX988_RS14865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FX988_RS14870 PF02548 Ketopantoate hydroxymethyltransferase FX988_RS14875 PF02569 Pantoate-beta-alanine ligase FX988_RS14880 PF00282 Pyridoxal-dependent decarboxylase conserved domain FX988_RS14885 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS14885 PF03707 Bacterial signalling protein N terminal repeat FX988_RS14885 PF00563 EAL domain FX988_RS14890 PF02390 Putative methyltransferase FX988_RS14895 PF01061 ABC-2 type transporter FX988_RS14900 PF00005 ABC transporter FX988_RS14905 PF02627 Carboxymuconolactone decarboxylase family FX988_RS14920 PF12450 von Willebrand factor FX988_RS14920 PF12034 Domain of unknown function (DUF3520) FX988_RS14920 PF00092 von Willebrand factor type A domain FX988_RS14925 PF00691 OmpA family FX988_RS14930 PF00072 Response regulator receiver domain FX988_RS14930 PF00486 Transcriptional regulatory protein, C terminal FX988_RS14935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS14935 PF00672 HAMP domain FX988_RS14935 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS14940 PF01931 Protein of unknown function DUF84 FX988_RS14945 PF00753 Metallo-beta-lactamase superfamily FX988_RS14950 PF03466 LysR substrate binding domain FX988_RS14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS14955 PF00672 HAMP domain FX988_RS14955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FX988_RS14955 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS14955 PF01627 Hpt domain FX988_RS14955 PF00072 Response regulator receiver domain FX988_RS14955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS14965 PF18158 Adaptive response protein AidB N-terminal domain FX988_RS14965 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS14965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS14980 PF01380 SIS domain FX988_RS14985 PF08220 DeoR-like helix-turn-helix domain FX988_RS14985 PF00455 DeoR C terminal sensor domain FX988_RS14990 PF12804 MobA-like NTP transferase domain FX988_RS14990 PF14602 Hexapeptide repeat of succinyl-transferase FX988_RS14990 PF00132 Bacterial transferase hexapeptide (six repeats) FX988_RS14995 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS15000 PF00892 EamA-like transporter family FX988_RS15005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FX988_RS15005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FX988_RS15015 PF00144 Beta-lactamase FX988_RS15020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FX988_RS15020 PF17810 Arginine decarboxylase helical bundle domain FX988_RS15020 PF17944 Arginine decarboxylase C-terminal helical extension FX988_RS15025 PF00583 Acetyltransferase (GNAT) family FX988_RS15025 PF00795 Carbon-nitrogen hydrolase FX988_RS15030 PF01381 Helix-turn-helix FX988_RS15050 PF14437 MafB19-like deaminase FX988_RS15060 PF07516 SecA Wing and Scaffold domain FX988_RS15060 PF02810 SEC-C motif FX988_RS15060 PF07517 SecA DEAD-like domain FX988_RS15060 PF01043 SecA preprotein cross-linking domain FX988_RS15080 PF04545 Sigma-70, region 4 FX988_RS15080 PF04542 Sigma-70 region 2 FX988_RS15080 PF04539 Sigma-70 region 3 FX988_RS15080 PF00140 Sigma-70 factor, region 1.2 FX988_RS15085 PF01551 Peptidase family M23 FX988_RS15085 PF01476 LysM domain FX988_RS15100 PF01975 Survival protein SurE FX988_RS15105 PF01142 tRNA pseudouridine synthase D (TruD) FX988_RS15110 PF02542 YgbB family FX988_RS15115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FX988_RS15120 PF04977 Septum formation initiator FX988_RS15135 PF01810 LysE type translocator FX988_RS15140 PF08239 Bacterial SH3 domain FX988_RS15145 PF01928 CYTH domain FX988_RS15150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FX988_RS15150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FX988_RS15150 PF00205 Thiamine pyrophosphate enzyme, central domain FX988_RS15155 PF00171 Aldehyde dehydrogenase family FX988_RS15160 PF02976 DNA mismatch repair enzyme MutH FX988_RS15165 PF07947 YhhN family FX988_RS15170 PF00293 NUDIX domain FX988_RS15175 PF00391 PEP-utilising enzyme, mobile domain FX988_RS15175 PF01590 GAF domain FX988_RS15175 PF05524 PEP-utilising enzyme, N-terminal FX988_RS15175 PF02896 PEP-utilising enzyme, TIM barrel domain FX988_RS15180 PF01925 Sulfite exporter TauE/SafE FX988_RS15185 PF01790 Prolipoprotein diacylglyceryl transferase FX988_RS15195 PF00210 Ferritin-like domain FX988_RS15205 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FX988_RS15215 PF00303 Thymidylate synthase FX988_RS15220 PF00072 Response regulator receiver domain FX988_RS15225 PF05230 MASE2 domain FX988_RS15225 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS15230 PF07690 Major Facilitator Superfamily FX988_RS15245 PF00849 RNA pseudouridylate synthase FX988_RS15250 PF18337 RapA N-terminal Tudor like domain FX988_RS15250 PF12137 RNA polymerase recycling family C-terminal FX988_RS15250 PF00176 SNF2 family N-terminal domain FX988_RS15250 PF18339 RapA N-terminal Tudor like domain 1 FX988_RS15250 PF00271 Helicase conserved C-terminal domain FX988_RS15255 PF02562 PhoH-like protein FX988_RS15255 PF13638 PIN domain FX988_RS15280 PF14497 Glutathione S-transferase, C-terminal domain FX988_RS15280 PF13417 Glutathione S-transferase, N-terminal domain FX988_RS15285 PF08244 Glycosyl hydrolases family 32 C terminal FX988_RS15285 PF00251 Glycosyl hydrolases family 32 N-terminal domain FX988_RS15290 PF00083 Sugar (and other) transporter FX988_RS15295 PF00356 Bacterial regulatory proteins, lacI family FX988_RS15300 PF00128 Alpha amylase, catalytic domain FX988_RS15325 PF01566 Natural resistance-associated macrophage protein FX988_RS15330 PF01968 Hydantoinase/oxoprolinase FX988_RS15330 PF05378 Hydantoinase/oxoprolinase N-terminal region FX988_RS15340 PF00378 Enoyl-CoA hydratase/isomerase FX988_RS15345 PF13193 AMP-binding enzyme C-terminal domain FX988_RS15345 PF00501 AMP-binding enzyme FX988_RS15350 PF12146 Serine aminopeptidase, S33 FX988_RS15355 PF01266 FAD dependent oxidoreductase FX988_RS15370 PF07715 TonB-dependent Receptor Plug Domain FX988_RS15370 PF00593 TonB dependent receptor FX988_RS15390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FX988_RS15390 PF00529 HlyD membrane-fusion protein of T1SS FX988_RS15395 PF00873 AcrB/AcrD/AcrF family FX988_RS15400 PF02321 Outer membrane efflux protein FX988_RS15415 PF07715 TonB-dependent Receptor Plug Domain FX988_RS15415 PF00593 TonB dependent receptor FX988_RS15425 PF01966 HD domain FX988_RS15425 PF13286 Phosphohydrolase-associated domain FX988_RS15450 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS15450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS15450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS15465 PF00593 TonB dependent receptor FX988_RS15465 PF07715 TonB-dependent Receptor Plug Domain FX988_RS15480 PF01321 Creatinase/Prolidase N-terminal domain FX988_RS15480 PF00557 Metallopeptidase family M24 FX988_RS15485 PF07715 TonB-dependent Receptor Plug Domain FX988_RS15485 PF00593 TonB dependent receptor FX988_RS15500 PF00005 ABC transporter FX988_RS15525 PF17151 Periplasmic sensor domain FX988_RS15525 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS15535 PF00440 Bacterial regulatory proteins, tetR family FX988_RS15535 PF13977 BetI-type transcriptional repressor, C-terminal FX988_RS15550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FX988_RS15575 PF00005 ABC transporter FX988_RS15585 PF18766 SWI2/SNF2 ATPase FX988_RS15585 PF11867 Domain of unknown function (DUF3387) FX988_RS15585 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FX988_RS15590 PF01420 Type I restriction modification DNA specificity domain FX988_RS15595 PF02384 N-6 DNA Methylase FX988_RS15600 PF08751 TrwC relaxase FX988_RS15600 PF18340 DNA relaxase TraI 2B/2B-like domain FX988_RS15600 PF07057 DNA helicase TraI FX988_RS15600 PF18272 single-stranded DNA binding TraI N-terminal subdomain FX988_RS15630 PF00589 Phage integrase family FX988_RS15630 PF13356 Arm DNA-binding domain FX988_RS15635 PF00118 TCP-1/cpn60 chaperonin family FX988_RS15640 PF00166 Chaperonin 10 Kd subunit FX988_RS15650 PF00465 Iron-containing alcohol dehydrogenase FX988_RS15655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FX988_RS15655 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS15660 PF01645 Conserved region in glutamate synthase FX988_RS15660 PF01493 GXGXG motif FX988_RS15660 PF00310 Glutamine amidotransferases class-II FX988_RS15660 PF04898 Glutamate synthase central domain FX988_RS15670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS15670 PF00989 PAS fold FX988_RS15670 PF18415 Histidine kinase receptor ArcB trans-membrane domain FX988_RS15670 PF01627 Hpt domain FX988_RS15670 PF00072 Response regulator receiver domain FX988_RS15670 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS15675 PF01250 Ribosomal protein S6 FX988_RS15680 PF01084 Ribosomal protein S18 FX988_RS15685 PF01281 Ribosomal protein L9, N-terminal domain FX988_RS15685 PF03948 Ribosomal protein L9, C-terminal domain FX988_RS15710 PF00593 TonB dependent receptor FX988_RS15710 PF07715 TonB-dependent Receptor Plug Domain FX988_RS15715 PF00348 Polyprenyl synthetase FX988_RS15720 PF00829 Ribosomal prokaryotic L21 protein FX988_RS15725 PF01016 Ribosomal L27 protein FX988_RS15730 PF01018 GTP1/OBG FX988_RS15730 PF01926 50S ribosome-binding GTPase FX988_RS15735 PF00186 Dihydrofolate reductase FX988_RS15745 PF08534 Redoxin FX988_RS15750 PF00313 'Cold-shock' DNA-binding domain FX988_RS15755 PF13091 PLD-like domain FX988_RS15765 PF00933 Glycosyl hydrolase family 3 N terminal domain FX988_RS15765 PF01915 Glycosyl hydrolase family 3 C-terminal domain FX988_RS15765 PF14310 Fibronectin type III-like domain FX988_RS15775 PF04616 Glycosyl hydrolases family 43 FX988_RS15780 PF00083 Sugar (and other) transporter FX988_RS15790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FX988_RS15790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FX988_RS15795 PF12833 Helix-turn-helix domain FX988_RS15800 PF00072 Response regulator receiver domain FX988_RS15800 PF01627 Hpt domain FX988_RS15800 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS15800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS15800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FX988_RS15800 PF00672 HAMP domain FX988_RS15815 PF02325 YGGT family FX988_RS15820 PF14748 Pyrroline-5-carboxylate reductase dimerisation FX988_RS15820 PF03807 NADP oxidoreductase coenzyme F420-dependent FX988_RS15825 PF01168 Alanine racemase, N-terminal domain FX988_RS15830 PF00437 Type II/IV secretion system protein FX988_RS15835 PF00437 Type II/IV secretion system protein FX988_RS15845 PF02899 Phage integrase, N-terminal SAM-like domain FX988_RS15845 PF00589 Phage integrase family FX988_RS15850 PF13098 Thioredoxin-like domain FX988_RS15850 PF10411 Disulfide bond isomerase protein N-terminus FX988_RS15855 PF17768 RecJ OB domain FX988_RS15855 PF01368 DHH family FX988_RS15855 PF02272 DHHA1 domain FX988_RS15865 PF02565 Recombination protein O C terminal FX988_RS15865 PF11967 Recombination protein O N terminal FX988_RS15870 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FX988_RS15875 PF01648 4'-phosphopantetheinyl transferase superfamily FX988_RS15880 PF04607 Region found in RelA / SpoT proteins FX988_RS15880 PF13291 ACT domain FX988_RS15880 PF02824 TGS domain FX988_RS15885 PF03819 MazG nucleotide pyrophosphohydrolase domain FX988_RS15900 PF00572 Ribosomal protein L13 FX988_RS15905 PF00380 Ribosomal protein S9/S16 FX988_RS15910 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FX988_RS15910 PF00355 Rieske [2Fe-2S] domain FX988_RS15915 PF00032 Cytochrome b(C-terminal)/b6/petD FX988_RS15915 PF00033 Cytochrome b/b6/petB FX988_RS15920 PF02167 Cytochrome C1 family FX988_RS15925 PF00043 Glutathione S-transferase, C-terminal domain FX988_RS15925 PF02798 Glutathione S-transferase, N-terminal domain FX988_RS15930 PF04386 Stringent starvation protein B FX988_RS15935 PF04972 BON domain FX988_RS15940 PF13580 SIS domain FX988_RS15945 PF02021 Uncharacterised protein family UPF0102 FX988_RS15950 PF04348 LppC putative lipoprotein FX988_RS15955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FX988_RS15980 PF16875 Glycosyl hydrolase family 36 N-terminal domain FX988_RS15980 PF16874 Glycosyl hydrolase family 36 C-terminal domain FX988_RS16000 PF00474 Sodium:solute symporter family FX988_RS16005 PF01266 FAD dependent oxidoreductase FX988_RS16005 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FX988_RS16015 PF02798 Glutathione S-transferase, N-terminal domain FX988_RS16020 PF01799 [2Fe-2S] binding domain FX988_RS16020 PF00111 2Fe-2S iron-sulfur cluster binding domain FX988_RS16025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FX988_RS16030 PF00072 Response regulator receiver domain FX988_RS16030 PF00486 Transcriptional regulatory protein, C terminal FX988_RS16040 PF06719 AraC-type transcriptional regulator N-terminus FX988_RS16040 PF12833 Helix-turn-helix domain FX988_RS16045 PF00465 Iron-containing alcohol dehydrogenase FX988_RS16050 PF00924 Mechanosensitive ion channel FX988_RS16050 PF05552 Conserved TM helix FX988_RS16070 PF18030 RimK PreATP-grasp domain FX988_RS16070 PF08443 RimK-like ATP-grasp domain FX988_RS16075 PF18030 RimK PreATP-grasp domain FX988_RS16075 PF08443 RimK-like ATP-grasp domain FX988_RS16080 PF01544 CorA-like Mg2+ transporter protein FX988_RS16085 PF01494 FAD binding domain FX988_RS16095 PF07729 FCD domain FX988_RS16095 PF00392 Bacterial regulatory proteins, gntR family FX988_RS16100 PF14592 Chondroitinase B FX988_RS16105 PF07690 Major Facilitator Superfamily FX988_RS16110 PF00294 pfkB family carbohydrate kinase FX988_RS16115 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FX988_RS16115 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FX988_RS16120 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FX988_RS16125 PF02233 NAD(P) transhydrogenase beta subunit FX988_RS16130 PF17156 Gammaproteobacterial periplasmic sensor domain FX988_RS16130 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS16140 PF01545 Cation efflux family FX988_RS16140 PF16916 Dimerisation domain of Zinc Transporter FX988_RS16145 PF05426 Alginate lyase FX988_RS16145 PF07940 Heparinase II/III-like protein FX988_RS16150 PF00356 Bacterial regulatory proteins, lacI family FX988_RS16180 PF01232 Mannitol dehydrogenase Rossmann domain FX988_RS16180 PF08125 Mannitol dehydrogenase C-terminal domain FX988_RS16185 PF03786 D-mannonate dehydratase (UxuA) FX988_RS16205 PF01202 Shikimate kinase FX988_RS16210 PF01566 Natural resistance-associated macrophage protein FX988_RS16220 PF00106 short chain dehydrogenase FX988_RS16225 PF14592 Chondroitinase B FX988_RS16250 PF07715 TonB-dependent Receptor Plug Domain FX988_RS16250 PF00593 TonB dependent receptor FX988_RS16255 PF01926 50S ribosome-binding GTPase FX988_RS16260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FX988_RS16260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FX988_RS16270 PF00072 Response regulator receiver domain FX988_RS16270 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS16275 PF03104 DNA polymerase family B, exonuclease domain FX988_RS16275 PF00136 DNA polymerase family B FX988_RS16285 PF00155 Aminotransferase class I and II FX988_RS16290 PF00593 TonB dependent receptor FX988_RS16290 PF07715 TonB-dependent Receptor Plug Domain FX988_RS16295 PF01047 MarR family FX988_RS16300 PF13533 Biotin-lipoyl like FX988_RS16310 PF00342 Phosphoglucose isomerase FX988_RS16315 PF00923 Transaldolase/Fructose-6-phosphate aldolase FX988_RS16325 PF03883 Peroxide stress protein YaaA FX988_RS16345 PF05360 yiaA/B two helix domain FX988_RS16350 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FX988_RS16350 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FX988_RS16355 PF02556 Preprotein translocase subunit SecB FX988_RS16360 PF00462 Glutaredoxin FX988_RS16365 PF00581 Rhodanese-like domain FX988_RS16370 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FX988_RS16370 PF01676 Metalloenzyme superfamily FX988_RS16375 PF01551 Peptidase family M23 FX988_RS16380 PF04748 Divergent polysaccharide deacetylase FX988_RS16385 PF05661 Protein of unknown function (DUF808) FX988_RS16390 PF06150 ChaB FX988_RS16395 PF00144 Beta-lactamase FX988_RS16405 PF00672 HAMP domain FX988_RS16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS16405 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS16405 PF01627 Hpt domain FX988_RS16405 PF00072 Response regulator receiver domain FX988_RS16405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FX988_RS16410 PF03279 Bacterial lipid A biosynthesis acyltransferase FX988_RS16420 PF03710 Glutamate-ammonia ligase adenylyltransferase FX988_RS16420 PF08335 GlnD PII-uridylyltransferase FX988_RS16425 PF01541 GIY-YIG catalytic domain FX988_RS16430 PF02321 Outer membrane efflux protein FX988_RS16440 PF00873 AcrB/AcrD/AcrF family FX988_RS16450 PF03006 Haemolysin-III related FX988_RS16455 PF01471 Putative peptidoglycan binding domain FX988_RS16455 PF13401 AAA domain FX988_RS16465 PF03466 LysR substrate binding domain FX988_RS16465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS16470 PF08669 Glycine cleavage T-protein C-terminal barrel domain FX988_RS16470 PF01571 Aminomethyltransferase folate-binding domain FX988_RS16475 PF01597 Glycine cleavage H-protein FX988_RS16500 PF00722 Glycosyl hydrolases family 16 FX988_RS16530 PF07715 TonB-dependent Receptor Plug Domain FX988_RS16530 PF00593 TonB dependent receptor FX988_RS16535 PF07690 Major Facilitator Superfamily FX988_RS16540 PF16385 Domain of unknown function FX988_RS16540 PF00884 Sulfatase FX988_RS16545 PF00933 Glycosyl hydrolase family 3 N terminal domain FX988_RS16550 PF00356 Bacterial regulatory proteins, lacI family FX988_RS16555 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS16555 PF08446 PAS fold FX988_RS16555 PF00360 Phytochrome region FX988_RS16555 PF01590 GAF domain FX988_RS16555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS16560 PF00696 Amino acid kinase family FX988_RS16560 PF01842 ACT domain FX988_RS16560 PF13840 ACT domain FX988_RS16560 PF03447 Homoserine dehydrogenase, NAD binding domain FX988_RS16560 PF00742 Homoserine dehydrogenase FX988_RS16565 PF00288 GHMP kinases N terminal domain FX988_RS16565 PF08544 GHMP kinases C terminal FX988_RS16570 PF14821 Threonine synthase N terminus FX988_RS16570 PF00291 Pyridoxal-phosphate dependent enzyme FX988_RS16575 PF03167 Uracil DNA glycosylase superfamily FX988_RS16580 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS16580 PF17151 Periplasmic sensor domain FX988_RS16585 PF01323 DSBA-like thioredoxin domain FX988_RS16590 PF01636 Phosphotransferase enzyme family FX988_RS16595 PF12801 4Fe-4S binding domain FX988_RS16595 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FX988_RS16595 PF13746 4Fe-4S dicluster domain FX988_RS16600 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS16600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS16605 PF00486 Transcriptional regulatory protein, C terminal FX988_RS16605 PF00072 Response regulator receiver domain FX988_RS16630 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS16630 PF00360 Phytochrome region FX988_RS16630 PF01590 GAF domain FX988_RS16630 PF00563 EAL domain FX988_RS16635 PF02872 5'-nucleotidase, C-terminal domain FX988_RS16635 PF00149 Calcineurin-like phosphoesterase FX988_RS16640 PF00133 tRNA synthetases class I (I, L, M and V) FX988_RS16640 PF08264 Anticodon-binding domain of tRNA FX988_RS16640 PF10458 Valyl tRNA synthetase tRNA binding arm FX988_RS16645 PF04364 DNA polymerase III chi subunit, HolC FX988_RS16650 PF02789 Cytosol aminopeptidase family, N-terminal domain FX988_RS16650 PF00883 Cytosol aminopeptidase family, catalytic domain FX988_RS16660 PF03739 Lipopolysaccharide export system permease LptF/LptG FX988_RS16665 PF03739 Lipopolysaccharide export system permease LptF/LptG FX988_RS16680 PF03527 RHS protein FX988_RS16680 PF05593 RHS Repeat FX988_RS16680 PF14220 Domain of unknown function (DUF4329) FX988_RS16720 PF08787 Alginate lyase FX988_RS16725 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS16725 PF05230 MASE2 domain FX988_RS16730 PF00392 Bacterial regulatory proteins, gntR family FX988_RS16730 PF00155 Aminotransferase class I and II FX988_RS16735 PF12801 4Fe-4S binding domain FX988_RS16735 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FX988_RS16735 PF13746 4Fe-4S dicluster domain FX988_RS16740 PF00672 HAMP domain FX988_RS16740 PF13426 PAS domain FX988_RS16740 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS16740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS16745 PF01339 CheB methylesterase FX988_RS16745 PF00072 Response regulator receiver domain FX988_RS16750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS16750 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS16755 PF00563 EAL domain FX988_RS16755 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS16755 PF03707 Bacterial signalling protein N terminal repeat FX988_RS16755 PF13188 PAS domain FX988_RS16760 PF00082 Subtilase family FX988_RS16765 PF01627 Hpt domain FX988_RS16765 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS16765 PF00072 Response regulator receiver domain FX988_RS16765 PF00672 HAMP domain FX988_RS16765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FX988_RS16765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS16770 PF03707 Bacterial signalling protein N terminal repeat FX988_RS16770 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS16770 PF00563 EAL domain FX988_RS16775 PF02954 Bacterial regulatory protein, Fis family FX988_RS16775 PF00072 Response regulator receiver domain FX988_RS16775 PF00158 Sigma-54 interaction domain FX988_RS16785 PF03544 Gram-negative bacterial TonB protein C-terminal FX988_RS16790 PF04545 Sigma-70, region 4 FX988_RS16790 PF04542 Sigma-70 region 2 FX988_RS16810 PF01263 Aldose 1-epimerase FX988_RS16815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FX988_RS16815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FX988_RS16820 PF07729 FCD domain FX988_RS16820 PF00392 Bacterial regulatory proteins, gntR family FX988_RS16825 PF08450 SMP-30/Gluconolactonase/LRE-like region FX988_RS16840 PF02381 MraZ protein, putative antitoxin-like FX988_RS16845 PF01795 MraW methylase family FX988_RS16850 PF04999 Cell division protein FtsL FX988_RS16855 PF03717 Penicillin-binding Protein dimerisation domain FX988_RS16855 PF00905 Penicillin binding protein transpeptidase domain FX988_RS16860 PF08245 Mur ligase middle domain FX988_RS16860 PF02875 Mur ligase family, glutamate ligase domain FX988_RS16860 PF01225 Mur ligase family, catalytic domain FX988_RS16865 PF08245 Mur ligase middle domain FX988_RS16865 PF02875 Mur ligase family, glutamate ligase domain FX988_RS16865 PF01225 Mur ligase family, catalytic domain FX988_RS16870 PF00953 Glycosyl transferase family 4 FX988_RS16870 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FX988_RS16875 PF02875 Mur ligase family, glutamate ligase domain FX988_RS16875 PF08245 Mur ligase middle domain FX988_RS16880 PF01098 Cell cycle protein FX988_RS16885 PF04101 Glycosyltransferase family 28 C-terminal domain FX988_RS16885 PF03033 Glycosyltransferase family 28 N-terminal domain FX988_RS16890 PF08245 Mur ligase middle domain FX988_RS16890 PF01225 Mur ligase family, catalytic domain FX988_RS16890 PF02875 Mur ligase family, glutamate ligase domain FX988_RS16895 PF07478 D-ala D-ala ligase C-terminus FX988_RS16895 PF01820 D-ala D-ala ligase N-terminus FX988_RS16900 PF08478 POTRA domain, FtsQ-type FX988_RS16900 PF03799 Cell division protein FtsQ FX988_RS16905 PF02491 SHS2 domain inserted in FTSA FX988_RS16910 PF00091 Tubulin/FtsZ family, GTPase domain FX988_RS16910 PF12327 FtsZ family, C-terminal domain FX988_RS16915 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FX988_RS16920 PF08525 Opacity-associated protein A N-terminal motif FX988_RS16920 PF01476 LysM domain FX988_RS16920 PF01551 Peptidase family M23 FX988_RS16925 PF01043 SecA preprotein cross-linking domain FX988_RS16925 PF07516 SecA Wing and Scaffold domain FX988_RS16925 PF02810 SEC-C motif FX988_RS16925 PF07517 SecA DEAD-like domain FX988_RS16930 PF00293 NUDIX domain FX988_RS16935 PF03466 LysR substrate binding domain FX988_RS16935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS16940 PF02525 Flavodoxin-like fold FX988_RS16990 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FX988_RS16995 PF01812 5-formyltetrahydrofolate cyclo-ligase family FX988_RS17000 PF01156 Inosine-uridine preferring nucleoside hydrolase FX988_RS17005 PF00294 pfkB family carbohydrate kinase FX988_RS17020 PF03695 Uncharacterised protein family (UPF0149) FX988_RS17025 PF00557 Metallopeptidase family M24 FX988_RS17025 PF05195 Aminopeptidase P, N-terminal domain FX988_RS17030 PF01494 FAD binding domain FX988_RS17035 PF04073 Aminoacyl-tRNA editing domain FX988_RS17040 PF01914 MarC family integral membrane protein FX988_RS17065 PF07726 ATPase family associated with various cellular activities (AAA) FX988_RS17065 PF17863 AAA lid domain FX988_RS17075 PF01523 Putative modulator of DNA gyrase FX988_RS17080 PF01523 Putative modulator of DNA gyrase FX988_RS17090 PF01321 Creatinase/Prolidase N-terminal domain FX988_RS17090 PF00557 Metallopeptidase family M24 FX988_RS17105 PF03009 Glycerophosphoryl diester phosphodiesterase family FX988_RS17115 PF02666 Phosphatidylserine decarboxylase FX988_RS17120 PF03193 RsgA GTPase FX988_RS17125 PF00929 Exonuclease FX988_RS17145 PF01226 Formate/nitrite transporter FX988_RS17150 PF00069 Protein kinase domain FX988_RS17150 PF03793 PASTA domain FX988_RS17155 PF02560 Cyanate lyase C-terminal domain FX988_RS17160 PF08447 PAS fold FX988_RS17160 PF13426 PAS domain FX988_RS17160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS17165 PF00753 Metallo-beta-lactamase superfamily FX988_RS17175 PF01479 S4 domain FX988_RS17175 PF00849 RNA pseudouridylate synthase FX988_RS17190 PF07715 TonB-dependent Receptor Plug Domain FX988_RS17190 PF00593 TonB dependent receptor FX988_RS17195 PF01037 Lrp/AsnC ligand binding domain FX988_RS17200 PF00672 HAMP domain FX988_RS17200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS17230 PF04399 Glutaredoxin 2, C terminal domain FX988_RS17230 PF13417 Glutathione S-transferase, N-terminal domain FX988_RS17240 PF04851 Type III restriction enzyme, res subunit FX988_RS17240 PF00271 Helicase conserved C-terminal domain FX988_RS17245 PF07690 Major Facilitator Superfamily FX988_RS17270 PF13476 AAA domain FX988_RS17275 PF00149 Calcineurin-like phosphoesterase FX988_RS17275 PF12320 Type 5 capsule protein repressor C-terminal domain FX988_RS17280 PF07715 TonB-dependent Receptor Plug Domain FX988_RS17280 PF00593 TonB dependent receptor FX988_RS17300 PF00563 EAL domain FX988_RS17300 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS17300 PF03707 Bacterial signalling protein N terminal repeat FX988_RS17305 PF00657 GDSL-like Lipase/Acylhydrolase FX988_RS17310 PF00005 ABC transporter FX988_RS17310 PF00664 ABC transporter transmembrane region FX988_RS17315 PF01327 Polypeptide deformylase FX988_RS17320 PF13406 Transglycosylase SLT domain FX988_RS17325 PF08497 Radical SAM N-terminal FX988_RS17325 PF04055 Radical SAM superfamily FX988_RS17325 PF11842 Domain of unknown function (DUF3362) FX988_RS17330 PF01965 DJ-1/PfpI family FX988_RS17340 PF11791 Aconitate B N-terminal domain FX988_RS17340 PF06434 Aconitate hydratase 2 N-terminus FX988_RS17340 PF00330 Aconitase family (aconitate hydratase) FX988_RS17350 PF01425 Amidase FX988_RS17355 PF01842 ACT domain FX988_RS17355 PF00696 Amino acid kinase family FX988_RS17360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FX988_RS17360 PF00672 HAMP domain FX988_RS17365 PF00149 Calcineurin-like phosphoesterase FX988_RS17370 PF04379 ApaG domain FX988_RS17375 PF00398 Ribosomal RNA adenine dimethylase FX988_RS17380 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FX988_RS17385 PF09312 SurA N-terminal domain FX988_RS17385 PF00639 PPIC-type PPIASE domain FX988_RS17390 PF04453 LPS transport system D FX988_RS17390 PF03968 OstA-like protein FX988_RS17395 PF01636 Phosphotransferase enzyme family FX988_RS17400 PF00483 Nucleotidyl transferase FX988_RS17405 PF05099 Tellurite resistance protein TerB FX988_RS17405 PF00226 DnaJ domain FX988_RS17420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS17420 PF16527 Two-component sensor protein CpxA, periplasmic domain FX988_RS17420 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS17420 PF00672 HAMP domain FX988_RS17425 PF00486 Transcriptional regulatory protein, C terminal FX988_RS17425 PF00072 Response regulator receiver domain FX988_RS17445 PF01053 Cys/Met metabolism PLP-dependent enzyme FX988_RS17480 PF01022 Bacterial regulatory protein, arsR family FX988_RS17490 PF03358 NADPH-dependent FMN reductase FX988_RS17495 PF01758 Sodium Bile acid symporter family FX988_RS17500 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FX988_RS17500 PF14602 Hexapeptide repeat of succinyl-transferase FX988_RS17530 PF00331 Glycosyl hydrolase family 10 FX988_RS17530 PF06452 Carbohydrate family 9 binding domain-like FX988_RS17530 PF02018 Carbohydrate binding domain FX988_RS17535 PF04315 Elongation factor P hydroxylase FX988_RS17550 PF01266 FAD dependent oxidoreductase FX988_RS17550 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FX988_RS17555 PF00109 Beta-ketoacyl synthase, N-terminal domain FX988_RS17555 PF02801 Beta-ketoacyl synthase, C-terminal domain FX988_RS17560 PF04168 A predicted alpha-helical domain with a conserved ER motif. FX988_RS17560 PF14403 Circularly permuted ATP-grasp type 2 FX988_RS17565 PF14403 Circularly permuted ATP-grasp type 2 FX988_RS17575 PF15887 Putative zinc-binding metallo-peptidase FX988_RS17575 PF10005 zinc-ribbon domain FX988_RS17585 PF13847 Methyltransferase domain FX988_RS17590 PF11893 Domain of unknown function (DUF3413) FX988_RS17590 PF00884 Sulfatase FX988_RS17595 PF07208 Protein of unknown function (DUF1414) FX988_RS17600 PF04245 37-kD nucleoid-associated bacterial protein FX988_RS17625 PF00563 EAL domain FX988_RS17625 PF05231 MASE1 FX988_RS17640 PF13545 Crp-like helix-turn-helix domain FX988_RS17640 PF00027 Cyclic nucleotide-binding domain FX988_RS17645 PF00596 Class II Aldolase and Adducin N-terminal domain FX988_RS17650 PF12697 Alpha/beta hydrolase family FX988_RS17655 PF11890 Domain of unknown function (DUF3410) FX988_RS17655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FX988_RS17655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FX988_RS17660 PF02774 Semialdehyde dehydrogenase, dimerisation domain FX988_RS17660 PF01118 Semialdehyde dehydrogenase, NAD binding domain FX988_RS17675 PF00563 EAL domain FX988_RS17675 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS17675 PF03707 Bacterial signalling protein N terminal repeat FX988_RS17700 PF00561 alpha/beta hydrolase fold FX988_RS17705 PF06945 Protein of unknown function (DUF1289) FX988_RS17710 PF05649 Peptidase family M13 FX988_RS17710 PF01431 Peptidase family M13 FX988_RS17715 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS17715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FX988_RS17720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FX988_RS17720 PF00364 Biotin-requiring enzyme FX988_RS17720 PF02817 e3 binding domain FX988_RS17725 PF17831 Pyruvate dehydrogenase E1 component middle domain FX988_RS17725 PF00456 Transketolase, thiamine diphosphate binding domain FX988_RS17730 PF00392 Bacterial regulatory proteins, gntR family FX988_RS17730 PF07729 FCD domain FX988_RS17735 PF17113 Regulatory signalling modulator protein AmpE FX988_RS17740 PF01510 N-acetylmuramoyl-L-alanine amidase FX988_RS17750 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FX988_RS17750 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FX988_RS17755 PF07963 Prokaryotic N-terminal methylation motif FX988_RS17755 PF00114 Pilin (bacterial filament) FX988_RS17760 PF00482 Type II secretion system (T2SS), protein F FX988_RS17765 PF06750 Bacterial Peptidase A24 N-terminal domain FX988_RS17765 PF01478 Type IV leader peptidase family FX988_RS17770 PF01121 Dephospho-CoA kinase FX988_RS17775 PF07072 Cell division protein FX988_RS17785 PF00462 Glutaredoxin FX988_RS17785 PF08534 Redoxin FX988_RS17805 PF04452 RNA methyltransferase FX988_RS17810 PF00924 Mechanosensitive ion channel FX988_RS17810 PF05552 Conserved TM helix FX988_RS17815 PF01435 Peptidase family M48 FX988_RS17820 PF02773 S-adenosylmethionine synthetase, C-terminal domain FX988_RS17820 PF00438 S-adenosylmethionine synthetase, N-terminal domain FX988_RS17820 PF02772 S-adenosylmethionine synthetase, central domain FX988_RS17825 PF02779 Transketolase, pyrimidine binding domain FX988_RS17825 PF00456 Transketolase, thiamine diphosphate binding domain FX988_RS17825 PF02780 Transketolase, C-terminal domain FX988_RS17830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FX988_RS17830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FX988_RS17835 PF00162 Phosphoglycerate kinase FX988_RS17840 PF00274 Fructose-bisphosphate aldolase class-I FX988_RS17860 PF02541 Ppx/GppA phosphatase family FX988_RS17865 PF02503 Polyphosphate kinase middle domain FX988_RS17865 PF13090 Polyphosphate kinase C-terminal domain 2 FX988_RS17865 PF17941 Polyphosphate kinase C-terminal domain 1 FX988_RS17865 PF13089 Polyphosphate kinase N-terminal domain FX988_RS17875 PF01865 Protein of unknown function DUF47 FX988_RS17880 PF01384 Phosphate transporter family FX988_RS17890 PF00528 Binding-protein-dependent transport system inner membrane component FX988_RS17895 PF00528 Binding-protein-dependent transport system inner membrane component FX988_RS17900 PF00005 ABC transporter FX988_RS17905 PF01895 PhoU domain FX988_RS17910 PF07396 Phosphate-selective porin O and P FX988_RS17915 PF03466 LysR substrate binding domain FX988_RS17915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS17920 PF08281 Sigma-70, region 4 FX988_RS17920 PF04542 Sigma-70 region 2 FX988_RS17945 PF02308 MgtC family FX988_RS17955 PF13460 NAD(P)H-binding FX988_RS17960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS17960 PF03466 LysR substrate binding domain FX988_RS17980 PF07690 Major Facilitator Superfamily FX988_RS17985 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FX988_RS17985 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FX988_RS17995 PF02954 Bacterial regulatory protein, Fis family FX988_RS17995 PF00072 Response regulator receiver domain FX988_RS17995 PF00158 Sigma-54 interaction domain FX988_RS18005 PF04172 LrgB-like family FX988_RS18025 PF01555 DNA methylase FX988_RS18030 PF04055 Radical SAM superfamily FX988_RS18030 PF06969 HemN C-terminal domain FX988_RS18035 PF01725 Ham1 family FX988_RS18060 PF00270 DEAD/DEAH box helicase FX988_RS18060 PF00271 Helicase conserved C-terminal domain FX988_RS18070 PF01743 Poly A polymerase head domain FX988_RS18070 PF12627 Probable RNA and SrmB- binding site of polymerase A FX988_RS18070 PF01966 HD domain FX988_RS18075 PF01471 Putative peptidoglycan binding domain FX988_RS18075 PF13401 AAA domain FX988_RS18095 PF04820 Tryptophan halogenase FX988_RS18110 PF06165 Glycosyltransferase family 36 FX988_RS18110 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FX988_RS18120 PF00356 Bacterial regulatory proteins, lacI family FX988_RS18125 PF00694 Aconitase C-terminal domain FX988_RS18130 PF00330 Aconitase family (aconitate hydratase) FX988_RS18135 PF00180 Isocitrate/isopropylmalate dehydrogenase FX988_RS18140 PF00682 HMGL-like FX988_RS18140 PF08502 LeuA allosteric (dimerisation) domain FX988_RS18150 PF00113 Enolase, C-terminal TIM barrel domain FX988_RS18150 PF03952 Enolase, N-terminal domain FX988_RS18155 PF06418 CTP synthase N-terminus FX988_RS18155 PF00117 Glutamine amidotransferase class-I FX988_RS18160 PF00072 Response regulator receiver domain FX988_RS18160 PF00486 Transcriptional regulatory protein, C terminal FX988_RS18165 PF01624 MutS domain I FX988_RS18165 PF05188 MutS domain II FX988_RS18165 PF05192 MutS domain III FX988_RS18165 PF05190 MutS family domain IV FX988_RS18165 PF00488 MutS domain V FX988_RS18170 PF02464 Competence-damaged protein FX988_RS18190 PF00154 recA bacterial DNA recombination protein FX988_RS18215 PF00005 ABC transporter FX988_RS18220 PF03379 CcmB protein FX988_RS18225 PF01578 Cytochrome C assembly protein FX988_RS18230 PF04995 Heme exporter protein D (CcmD) FX988_RS18235 PF03100 CcmE FX988_RS18240 PF01578 Cytochrome C assembly protein FX988_RS18240 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FX988_RS18245 PF08534 Redoxin FX988_RS18250 PF03918 Cytochrome C biogenesis protein FX988_RS18265 PF16363 GDP-mannose 4,6 dehydratase FX988_RS18275 PF00854 POT family FX988_RS18280 PF02563 Polysaccharide biosynthesis/export protein FX988_RS18280 PF10531 SLBB domain FX988_RS18290 PF02719 Polysaccharide biosynthesis protein FX988_RS18295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FX988_RS18305 PF03102 NeuB family FX988_RS18305 PF08666 SAF domain FX988_RS18310 PF13472 GDSL-like Lipase/Acylhydrolase family FX988_RS18310 PF02348 Cytidylyltransferase FX988_RS18315 PF00483 Nucleotidyl transferase FX988_RS18330 PF00535 Glycosyl transferase family 2 FX988_RS18345 PF00953 Glycosyl transferase family 4 FX988_RS18350 PF06082 Exopolysaccharide biosynthesis protein YbjH FX988_RS18360 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FX988_RS18370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FX988_RS18370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FX988_RS18370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FX988_RS18375 PF00483 Nucleotidyl transferase FX988_RS18385 PF00180 Isocitrate/isopropylmalate dehydrogenase FX988_RS18385 PF18324 Hypothetical protein TT1725 FX988_RS18400 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FX988_RS18400 PF11892 Domain of unknown function (DUF3412) FX988_RS18400 PF03641 Possible lysine decarboxylase FX988_RS18405 PF14489 QueF-like protein FX988_RS18405 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FX988_RS18410 PF07348 Syd protein (SUKH-2) FX988_RS18450 PF00849 RNA pseudouridylate synthase FX988_RS18455 PF00258 Flavodoxin FX988_RS18460 PF04151 Bacterial pre-peptidase C-terminal domain FX988_RS18460 PF04389 Peptidase family M28 FX988_RS18465 PF01649 Ribosomal protein S20 FX988_RS18470 PF03023 Lipid II flippase MurJ FX988_RS18475 PF06574 FAD synthetase FX988_RS18475 PF01687 Riboflavin kinase FX988_RS18480 PF06827 Zinc finger found in FPG and IleRS FX988_RS18480 PF00133 tRNA synthetases class I (I, L, M and V) FX988_RS18480 PF08264 Anticodon-binding domain of tRNA FX988_RS18485 PF01252 Signal peptidase (SPase) II FX988_RS18490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FX988_RS18495 PF02401 LytB protein FX988_RS18520 PF07963 Prokaryotic N-terminal methylation motif FX988_RS18520 PF08334 Type II secretion system (T2SS), protein G FX988_RS18530 PF07963 Prokaryotic N-terminal methylation motif FX988_RS18530 PF14245 Type IV pilin PilA FX988_RS18555 PF02540 NAD synthase FX988_RS18560 PF00543 Nitrogen regulatory protein P-II FX988_RS18565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FX988_RS18575 PF03937 Flavinator of succinate dehydrogenase FX988_RS18590 PF00890 FAD binding domain FX988_RS18590 PF02910 Fumarate reductase flavoprotein C-term FX988_RS18595 PF04542 Sigma-70 region 2 FX988_RS18595 PF08281 Sigma-70, region 4 FX988_RS18600 PF03873 Anti sigma-E protein RseA, C-terminal domain FX988_RS18600 PF03872 Anti sigma-E protein RseA, N-terminal domain FX988_RS18605 PF03888 MucB/RseB N-terminal domain FX988_RS18605 PF17188 MucB/RseB C-terminal domain FX988_RS18615 PF06421 GTP-binding protein LepA C-terminus FX988_RS18615 PF03144 Elongation factor Tu domain 2 FX988_RS18615 PF00009 Elongation factor Tu GTP binding domain FX988_RS18615 PF00679 Elongation factor G C-terminus FX988_RS18620 PF10502 Signal peptidase, peptidase S26 FX988_RS18625 PF14622 Ribonuclease-III-like FX988_RS18625 PF00035 Double-stranded RNA binding motif FX988_RS18630 PF01926 50S ribosome-binding GTPase FX988_RS18630 PF07650 KH domain FX988_RS18635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FX988_RS18635 PF01243 Pyridoxamine 5'-phosphate oxidase FX988_RS18640 PF01026 TatD related DNase FX988_RS18650 PF00005 ABC transporter FX988_RS18675 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FX988_RS18675 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FX988_RS18680 PF10688 Bacterial inner membrane protein FX988_RS18705 PF05697 Bacterial trigger factor protein (TF) FX988_RS18705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FX988_RS18705 PF05698 Bacterial trigger factor protein (TF) C-terminus FX988_RS18710 PF00574 Clp protease FX988_RS18715 PF06689 ClpX C4-type zinc finger FX988_RS18715 PF10431 C-terminal, D2-small domain, of ClpB protein FX988_RS18715 PF07724 AAA domain (Cdc48 subfamily) FX988_RS18720 PF00004 ATPase family associated with various cellular activities (AAA) FX988_RS18720 PF02190 ATP-dependent protease La (LON) substrate-binding domain FX988_RS18720 PF05362 Lon protease (S16) C-terminal proteolytic domain FX988_RS18725 PF00216 Bacterial DNA-binding protein FX988_RS18730 PF13145 PPIC-type PPIASE domain FX988_RS18735 PF00334 Nucleoside diphosphate kinase FX988_RS18740 PF04055 Radical SAM superfamily FX988_RS18750 PF13464 Domain of unknown function (DUF4115) FX988_RS18755 PF04551 GcpE protein FX988_RS18760 PF13393 Histidyl-tRNA synthetase FX988_RS18760 PF03129 Anticodon binding domain FX988_RS18765 PF09976 Tetratricopeptide repeat-like domain FX988_RS18770 PF13360 PQQ-like domain FX988_RS18775 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FX988_RS18775 PF01926 50S ribosome-binding GTPase FX988_RS18780 PF13742 OB-fold nucleic acid binding domain FX988_RS18780 PF02601 Exonuclease VII, large subunit FX988_RS18785 PF00571 CBS domain FX988_RS18785 PF00478 IMP dehydrogenase / GMP reductase domain FX988_RS18790 PF00117 Glutamine amidotransferase class-I FX988_RS18790 PF00958 GMP synthase C terminal domain FX988_RS18790 PF02540 NAD synthase FX988_RS18810 PF14437 MafB19-like deaminase FX988_RS18815 PF01464 Transglycosylase SLT domain FX988_RS18815 PF00497 Bacterial extracellular solute-binding proteins, family 3 FX988_RS18820 PF02769 AIR synthase related protein, C-terminal domain FX988_RS18820 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FX988_RS18820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FX988_RS18830 PF01433 Peptidase family M1 domain FX988_RS18840 PF00593 TonB dependent receptor FX988_RS18840 PF07660 Secretin and TonB N terminus short domain FX988_RS18840 PF07715 TonB-dependent Receptor Plug Domain FX988_RS18875 PF00072 Response regulator receiver domain FX988_RS18875 PF01584 CheW-like domain FX988_RS18880 PF03705 CheR methyltransferase, all-alpha domain FX988_RS18880 PF01739 CheR methyltransferase, SAM binding domain FX988_RS18885 PF00460 Flagella basal body rod protein FX988_RS18890 PF00460 Flagella basal body rod protein FX988_RS18890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FX988_RS18895 PF13861 FlgD Tudor-like domain FX988_RS18895 PF13860 FlgD Ig-like domain FX988_RS18895 PF03963 Flagellar hook capping protein - N-terminal region FX988_RS18900 PF07559 Flagellar basal body protein FlaE FX988_RS18900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FX988_RS18900 PF00460 Flagella basal body rod protein FX988_RS18905 PF00460 Flagella basal body rod protein FX988_RS18905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FX988_RS18910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FX988_RS18910 PF00460 Flagella basal body rod protein FX988_RS18915 PF02107 Flagellar L-ring protein FX988_RS18920 PF02119 Flagellar P-ring protein FX988_RS18925 PF10135 Rod binding protein FX988_RS18925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FX988_RS18930 PF00460 Flagella basal body rod protein FX988_RS18930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FX988_RS18935 PF00669 Bacterial flagellin N-terminal helical region FX988_RS18945 PF00669 Bacterial flagellin N-terminal helical region FX988_RS18945 PF00700 Bacterial flagellin C-terminal helical region FX988_RS18945 PF07196 Flagellin hook IN motif FX988_RS18950 PF07196 Flagellin hook IN motif FX988_RS18950 PF00669 Bacterial flagellin N-terminal helical region FX988_RS18950 PF00700 Bacterial flagellin C-terminal helical region FX988_RS18955 PF00700 Bacterial flagellin C-terminal helical region FX988_RS18955 PF07196 Flagellin hook IN motif FX988_RS18955 PF00669 Bacterial flagellin N-terminal helical region FX988_RS18960 PF03646 FlaG protein FX988_RS18965 PF07196 Flagellin hook IN motif FX988_RS18965 PF02465 Flagellar hook-associated protein 2 N-terminus FX988_RS18965 PF07195 Flagellar hook-associated protein 2 C-terminus FX988_RS18970 PF02561 Flagellar protein FliS FX988_RS18980 PF02719 Polysaccharide biosynthesis protein FX988_RS18985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FX988_RS18990 PF02348 Cytidylyltransferase FX988_RS19000 PF03102 NeuB family FX988_RS19000 PF08666 SAF domain FX988_RS19020 PF00501 AMP-binding enzyme FX988_RS19030 PF00535 Glycosyl transferase family 2 FX988_RS19035 PF03275 UDP-galactopyranose mutase FX988_RS19045 PF08241 Methyltransferase domain FX988_RS19055 PF00535 Glycosyl transferase family 2 FX988_RS19060 PF01209 ubiE/COQ5 methyltransferase family FX988_RS19065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FX988_RS19070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FX988_RS19070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FX988_RS19075 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 FX988_RS19075 PF00535 Glycosyl transferase family 2 FX988_RS19080 PF02222 ATP-grasp domain FX988_RS19105 PF00669 Bacterial flagellin N-terminal helical region FX988_RS19105 PF00700 Bacterial flagellin C-terminal helical region FX988_RS19110 PF00158 Sigma-54 interaction domain FX988_RS19110 PF00072 Response regulator receiver domain FX988_RS19110 PF02954 Bacterial regulatory protein, Fis family FX988_RS19115 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS19115 PF00989 PAS fold FX988_RS19115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS19120 PF02954 Bacterial regulatory protein, Fis family FX988_RS19120 PF00158 Sigma-54 interaction domain FX988_RS19125 PF02049 Flagellar hook-basal body complex protein FliE FX988_RS19130 PF08345 Flagellar M-ring protein C-terminal FX988_RS19130 PF01514 Secretory protein of YscJ/FliF family FX988_RS19135 PF01706 FliG C-terminal domain FX988_RS19135 PF14842 FliG N-terminal domain FX988_RS19135 PF14841 FliG middle domain FX988_RS19145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FX988_RS19145 PF18269 T3SS EscN ATPase C-terminal domain FX988_RS19165 PF02154 Flagellar motor switch protein FliM FX988_RS19165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FX988_RS19170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FX988_RS19175 PF04347 Flagellar biosynthesis protein, FliO FX988_RS19180 PF00813 FliP family FX988_RS19185 PF01313 Bacterial export proteins, family 3 FX988_RS19190 PF01311 Bacterial export proteins, family 1 FX988_RS19195 PF01312 FlhB HrpN YscU SpaS Family FX988_RS19200 PF00771 FHIPEP family FX988_RS19205 PF00448 SRP54-type protein, GTPase domain FX988_RS19210 PF10609 NUBPL iron-transfer P-loop NTPase FX988_RS19215 PF04545 Sigma-70, region 4 FX988_RS19215 PF04542 Sigma-70 region 2 FX988_RS19215 PF04539 Sigma-70 region 3 FX988_RS19220 PF00072 Response regulator receiver domain FX988_RS19225 PF04344 Chemotaxis phosphatase, CheZ FX988_RS19230 PF01584 CheW-like domain FX988_RS19230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS19230 PF01627 Hpt domain FX988_RS19230 PF02895 Signal transducing histidine kinase, homodimeric domain FX988_RS19230 PF07194 P2 response regulator binding domain FX988_RS19235 PF01339 CheB methylesterase FX988_RS19235 PF00072 Response regulator receiver domain FX988_RS19240 PF13614 AAA domain FX988_RS19250 PF01584 CheW-like domain FX988_RS19260 PF04204 Homoserine O-succinyltransferase FX988_RS19265 PF02310 B12 binding domain FX988_RS19265 PF02965 Vitamin B12 dependent methionine synthase, activation domain FX988_RS19265 PF02607 B12 binding domain FX988_RS19265 PF02574 Homocysteine S-methyltransferase FX988_RS19265 PF00809 Pterin binding enzyme FX988_RS19270 PF02310 B12 binding domain FX988_RS19270 PF02965 Vitamin B12 dependent methionine synthase, activation domain FX988_RS19270 PF02607 B12 binding domain FX988_RS19270 PF00809 Pterin binding enzyme FX988_RS19270 PF02574 Homocysteine S-methyltransferase FX988_RS19285 PF02631 RecX family FX988_RS19290 PF01411 tRNA synthetases class II (A) FX988_RS19290 PF02272 DHHA1 domain FX988_RS19290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FX988_RS19295 PF02599 Global regulator protein family FX988_RS19315 PF04277 Oxaloacetate decarboxylase, gamma chain FX988_RS19320 PF02436 Conserved carboxylase domain FX988_RS19320 PF00364 Biotin-requiring enzyme FX988_RS19320 PF00682 HMGL-like FX988_RS19325 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FX988_RS19330 PF00005 ABC transporter FX988_RS19335 PF00005 ABC transporter FX988_RS19335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FX988_RS19340 PF00528 Binding-protein-dependent transport system inner membrane component FX988_RS19340 PF12911 N-terminal TM domain of oligopeptide transport permease C FX988_RS19345 PF00528 Binding-protein-dependent transport system inner membrane component FX988_RS19350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FX988_RS19355 PF00158 Sigma-54 interaction domain FX988_RS19355 PF02954 Bacterial regulatory protein, Fis family FX988_RS19360 PF04012 PspA/IM30 family FX988_RS19365 PF06667 Phage shock protein B FX988_RS19375 PF04317 YcjX-like family, DUF463 FX988_RS19380 PF05128 Domain of unknown function (DUF697) FX988_RS19385 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FX988_RS19390 PF00158 Sigma-54 interaction domain FX988_RS19390 PF18024 Helix-turn-helix domain FX988_RS19395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FX988_RS19400 PF01037 Lrp/AsnC ligand binding domain FX988_RS19405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FX988_RS19405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FX988_RS19445 PF01618 MotA/TolQ/ExbB proton channel family FX988_RS19450 PF01618 MotA/TolQ/ExbB proton channel family FX988_RS19455 PF02472 Biopolymer transport protein ExbD/TolR FX988_RS19460 PF03544 Gram-negative bacterial TonB protein C-terminal FX988_RS19485 PF00012 Hsp70 protein FX988_RS19500 PF09962 Uncharacterized conserved protein (DUF2196) FX988_RS19505 PF12833 Helix-turn-helix domain FX988_RS19510 PF00633 Helix-hairpin-helix motif FX988_RS19510 PF00730 HhH-GPD superfamily base excision DNA repair protein FX988_RS19510 PF10576 Iron-sulfur binding domain of endonuclease III FX988_RS19515 PF02508 Rnf-Nqr subunit, membrane protein FX988_RS19520 PF04205 FMN-binding domain FX988_RS19525 PF03116 NQR2, RnfD, RnfE family FX988_RS19530 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FX988_RS19530 PF10531 SLBB domain FX988_RS19530 PF13237 4Fe-4S dicluster domain FX988_RS19530 PF13375 RnfC Barrel sandwich hybrid domain FX988_RS19535 PF04060 Putative Fe-S cluster FX988_RS19540 PF02508 Rnf-Nqr subunit, membrane protein FX988_RS19555 PF01554 MatE FX988_RS19560 PF02151 UvrB/uvrC motif FX988_RS19560 PF12344 Ultra-violet resistance protein B FX988_RS19560 PF17757 UvrB interaction domain FX988_RS19560 PF00271 Helicase conserved C-terminal domain FX988_RS19560 PF04851 Type III restriction enzyme, res subunit FX988_RS19570 PF00072 Response regulator receiver domain FX988_RS19570 PF01627 Hpt domain FX988_RS19570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS19570 PF00672 HAMP domain FX988_RS19570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FX988_RS19570 PF00512 His Kinase A (phospho-acceptor) domain FX988_RS19575 PF06508 Queuosine biosynthesis protein QueC FX988_RS19580 PF04055 Radical SAM superfamily FX988_RS19595 PF00107 Zinc-binding dehydrogenase FX988_RS19595 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS19605 PF00733 Asparagine synthase FX988_RS19605 PF13537 Glutamine amidotransferase domain FX988_RS19625 PF00005 ABC transporter FX988_RS19630 PF12679 ABC-2 family transporter protein FX988_RS19640 PF02938 GAD domain FX988_RS19640 PF00152 tRNA synthetases class II (D, K and N) FX988_RS19640 PF01336 OB-fold nucleic acid binding domain FX988_RS19645 PF00293 NUDIX domain FX988_RS19650 PF02075 Crossover junction endodeoxyribonuclease RuvC FX988_RS19655 PF07499 RuvA, C-terminal domain FX988_RS19655 PF01330 RuvA N terminal domain FX988_RS19660 PF05491 RuvB C-terminal winged helix domain FX988_RS19660 PF17864 RuvB AAA lid domain FX988_RS19660 PF05496 Holliday junction DNA helicase RuvB P-loop domain FX988_RS19665 PF03061 Thioesterase superfamily FX988_RS19670 PF01618 MotA/TolQ/ExbB proton channel family FX988_RS19675 PF02472 Biopolymer transport protein ExbD/TolR FX988_RS19685 PF07676 WD40-like Beta Propeller Repeat FX988_RS19685 PF04052 TolB amino-terminal domain FX988_RS19690 PF00691 OmpA family FX988_RS19695 PF13174 Tetratricopeptide repeat FX988_RS19695 PF16331 TolA binding protein trimerisation FX988_RS19710 PF08668 HDOD domain FX988_RS19730 PF00483 Nucleotidyl transferase FX988_RS19745 PF00682 HMGL-like FX988_RS19750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FX988_RS19750 PF00364 Biotin-requiring enzyme FX988_RS19750 PF00289 Biotin carboxylase, N-terminal domain FX988_RS19750 PF02785 Biotin carboxylase C-terminal domain FX988_RS19755 PF00378 Enoyl-CoA hydratase/isomerase FX988_RS19760 PF01039 Carboxyl transferase domain FX988_RS19765 PF02770 Acyl-CoA dehydrogenase, middle domain FX988_RS19765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FX988_RS19765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FX988_RS19770 PF00376 MerR family regulatory protein FX988_RS19770 PF09278 MerR, DNA binding FX988_RS19775 PF00108 Thiolase, N-terminal domain FX988_RS19775 PF02803 Thiolase, C-terminal domain FX988_RS19785 PF00266 Aminotransferase class-V FX988_RS19790 PF00072 Response regulator receiver domain FX988_RS19790 PF00486 Transcriptional regulatory protein, C terminal FX988_RS19810 PF00749 tRNA synthetases class I (E and Q), catalytic domain FX988_RS19845 PF01207 Dihydrouridine synthase (Dus) FX988_RS19855 PF13472 GDSL-like Lipase/Acylhydrolase family FX988_RS19860 PF00005 ABC transporter FX988_RS19870 PF08338 Domain of unknown function (DUF1731) FX988_RS19870 PF01370 NAD dependent epimerase/dehydratase family FX988_RS19875 PF02152 Dihydroneopterin aldolase FX988_RS19880 PF01594 AI-2E family transporter FX988_RS19890 PF02492 CobW/HypB/UreG, nucleotide-binding domain FX988_RS19890 PF07683 Cobalamin synthesis protein cobW C-terminal domain FX988_RS19895 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS19905 PF05114 Protein of unknown function (DUF692) FX988_RS19915 PF00156 Phosphoribosyl transferase domain FX988_RS19920 PF12169 DNA polymerase III subunits gamma and tau domain III FX988_RS19920 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FX988_RS19920 PF12170 DNA polymerase III tau subunit V interacting with alpha FX988_RS19925 PF02575 YbaB/EbfC DNA-binding family FX988_RS19930 PF06445 GyrI-like small molecule binding domain FX988_RS19935 PF02132 RecR protein FX988_RS19935 PF13662 Toprim domain FX988_RS19940 PF00183 Hsp90 protein FX988_RS19940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FX988_RS19945 PF05191 Adenylate kinase, active site lid FX988_RS19955 PF00011 Hsp20/alpha crystallin family FX988_RS19960 PF04264 YceI-like domain FX988_RS19965 PF01292 Prokaryotic cytochrome b561 FX988_RS19970 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FX988_RS19970 PF01502 Phosphoribosyl-AMP cyclohydrolase FX988_RS19975 PF00977 Histidine biosynthesis protein FX988_RS19980 PF01063 Amino-transferase class IV FX988_RS19985 PF00977 Histidine biosynthesis protein FX988_RS19990 PF00117 Glutamine amidotransferase class-I FX988_RS19995 PF00475 Imidazoleglycerol-phosphate dehydratase FX988_RS20000 PF00155 Aminotransferase class I and II FX988_RS20005 PF00815 Histidinol dehydrogenase FX988_RS20010 PF01634 ATP phosphoribosyltransferase FX988_RS20010 PF08029 HisG, C-terminal domain FX988_RS20025 PF00248 Aldo/keto reductase family FX988_RS20035 PF03601 Conserved hypothetical protein 698 FX988_RS20050 PF00440 Bacterial regulatory proteins, tetR family FX988_RS20050 PF08361 MAATS-type transcriptional repressor, C-terminal region FX988_RS20055 PF13533 Biotin-lipoyl like FX988_RS20060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FX988_RS20065 PF00873 AcrB/AcrD/AcrF family FX988_RS20070 PF13411 MerR HTH family regulatory protein FX988_RS20085 PF07715 TonB-dependent Receptor Plug Domain FX988_RS20085 PF00593 TonB dependent receptor FX988_RS20095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FX988_RS20100 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FX988_RS20120 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS20120 PF17151 Periplasmic sensor domain FX988_RS20160 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FX988_RS20160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FX988_RS20165 PF00115 Cytochrome C and Quinol oxidase polypeptide I FX988_RS20215 PF00266 Aminotransferase class-V FX988_RS20245 PF08502 LeuA allosteric (dimerisation) domain FX988_RS20245 PF00682 HMGL-like FX988_RS20250 PF13404 AsnC-type helix-turn-helix domain FX988_RS20250 PF01037 Lrp/AsnC ligand binding domain FX988_RS20260 PF01810 LysE type translocator FX988_RS20280 PF00155 Aminotransferase class I and II FX988_RS20285 PF00593 TonB dependent receptor FX988_RS20285 PF07715 TonB-dependent Receptor Plug Domain FX988_RS20295 PF01497 Periplasmic binding protein FX988_RS20300 PF01032 FecCD transport family FX988_RS20305 PF00005 ABC transporter FX988_RS20330 PF00589 Phage integrase family FX988_RS20330 PF13495 Phage integrase, N-terminal SAM-like domain FX988_RS20345 PF01381 Helix-turn-helix FX988_RS20360 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FX988_RS20365 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FX988_RS20370 PF00704 Glycosyl hydrolases family 18 FX988_RS20370 PF08329 Chitinase A, N-terminal domain FX988_RS20395 PF00171 Aldehyde dehydrogenase family FX988_RS20410 PF07702 UTRA domain FX988_RS20410 PF00392 Bacterial regulatory proteins, gntR family FX988_RS20425 PF00501 AMP-binding enzyme FX988_RS20425 PF14535 AMP-binding enzyme C-terminal domain FX988_RS20430 PF01425 Amidase FX988_RS20465 PF00392 Bacterial regulatory proteins, gntR family FX988_RS20465 PF07702 UTRA domain FX988_RS20480 PF00330 Aconitase family (aconitate hydratase) FX988_RS20485 PF00694 Aconitase C-terminal domain FX988_RS20495 PF02515 CoA-transferase family III FX988_RS20500 PF00682 HMGL-like FX988_RS20510 PF13417 Glutathione S-transferase, N-terminal domain FX988_RS20515 PF00107 Zinc-binding dehydrogenase FX988_RS20515 PF16884 N-terminal domain of oxidoreductase FX988_RS20525 PF07715 TonB-dependent Receptor Plug Domain FX988_RS20525 PF00593 TonB dependent receptor FX988_RS20545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FX988_RS20545 PF00378 Enoyl-CoA hydratase/isomerase FX988_RS20545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FX988_RS20580 PF00857 Isochorismatase family FX988_RS20590 PF08241 Methyltransferase domain FX988_RS20610 PF00892 EamA-like transporter family FX988_RS20620 PF03279 Bacterial lipid A biosynthesis acyltransferase FX988_RS20640 PF03328 HpcH/HpaI aldolase/citrate lyase family FX988_RS20655 PF02515 CoA-transferase family III FX988_RS20660 PF02515 CoA-transferase family III FX988_RS20670 PF00593 TonB dependent receptor FX988_RS20670 PF07715 TonB-dependent Receptor Plug Domain FX988_RS20675 PF01593 Flavin containing amine oxidoreductase FX988_RS20690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS20690 PF03466 LysR substrate binding domain FX988_RS20705 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS20705 PF17151 Periplasmic sensor domain FX988_RS20725 PF00325 Bacterial regulatory proteins, crp family FX988_RS20725 PF00027 Cyclic nucleotide-binding domain FX988_RS20745 PF00583 Acetyltransferase (GNAT) family FX988_RS20750 PF16347 Domain of unknown function (DUF4976) FX988_RS20750 PF00884 Sulfatase FX988_RS20765 PF00356 Bacterial regulatory proteins, lacI family FX988_RS20770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FX988_RS20770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FX988_RS20780 PF03825 Nucleoside H+ symporter FX988_RS20790 PF00732 GMC oxidoreductase FX988_RS20790 PF05199 GMC oxidoreductase FX988_RS20805 PF00474 Sodium:solute symporter family FX988_RS20810 PF00291 Pyridoxal-phosphate dependent enzyme FX988_RS20825 PF00529 HlyD membrane-fusion protein of T1SS FX988_RS20825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FX988_RS20830 PF00664 ABC transporter transmembrane region FX988_RS20830 PF00005 ABC transporter FX988_RS20830 PF03412 Peptidase C39 family FX988_RS20835 PF02321 Outer membrane efflux protein FX988_RS20845 PF00331 Glycosyl hydrolase family 10 FX988_RS20850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS20850 PF03466 LysR substrate binding domain FX988_RS20860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FX988_RS20860 PF03466 LysR substrate binding domain FX988_RS20875 PF03372 Endonuclease/Exonuclease/phosphatase family FX988_RS20885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FX988_RS20885 PF13378 Enolase C-terminal domain-like FX988_RS20890 PF07690 Major Facilitator Superfamily FX988_RS20895 PF00294 pfkB family carbohydrate kinase FX988_RS20900 PF01081 KDPG and KHG aldolase FX988_RS20905 PF02449 Beta-galactosidase FX988_RS20905 PF17992 Agarase CBM like domain FX988_RS20910 PF08450 SMP-30/Gluconolactonase/LRE-like region FX988_RS20915 PF17992 Agarase CBM like domain FX988_RS20915 PF02449 Beta-galactosidase FX988_RS20920 PF08240 Alcohol dehydrogenase GroES-like domain FX988_RS20920 PF00107 Zinc-binding dehydrogenase FX988_RS20925 PF16925 Tetracyclin repressor-like, C-terminal domain FX988_RS20925 PF00440 Bacterial regulatory proteins, tetR family FX988_RS20935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FX988_RS20950 PF00892 EamA-like transporter family FX988_RS20960 PF00583 Acetyltransferase (GNAT) family FX988_RS20965 PF01292 Prokaryotic cytochrome b561 FX988_RS20975 PF00313 'Cold-shock' DNA-binding domain FX988_RS20985 PF01734 Patatin-like phospholipase FX988_RS21000 PF02416 mttA/Hcf106 family FX988_RS21010 PF00902 Sec-independent protein translocase protein (TatC) FX988_RS21030 PF07715 TonB-dependent Receptor Plug Domain FX988_RS21030 PF00593 TonB dependent receptor FX988_RS21040 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FX988_RS21045 PF01799 [2Fe-2S] binding domain FX988_RS21045 PF00111 2Fe-2S iron-sulfur cluster binding domain FX988_RS21055 PF00271 Helicase conserved C-terminal domain FX988_RS21055 PF00176 SNF2 family N-terminal domain FX988_RS21055 PF12419 SNF2 Helicase protein FX988_RS21080 PF00440 Bacterial regulatory proteins, tetR family FX988_RS21080 PF13977 BetI-type transcriptional repressor, C-terminal FX988_RS21085 PF00171 Aldehyde dehydrogenase family FX988_RS21090 PF05199 GMC oxidoreductase FX988_RS21090 PF00732 GMC oxidoreductase FX988_RS21120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FX988_RS21120 PF07992 Pyridine nucleotide-disulphide oxidoreductase FX988_RS21125 PF01668 SmpB protein FX988_RS21130 PF03364 Polyketide cyclase / dehydrase and lipid transport FX988_RS21135 PF03658 RnfH family Ubiquitin FX988_RS21145 PF03618 Kinase/pyrophosphorylase FX988_RS21150 PF02896 PEP-utilising enzyme, TIM barrel domain FX988_RS21150 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FX988_RS21150 PF00391 PEP-utilising enzyme, mobile domain FX988_RS21160 PF13183 4Fe-4S dicluster domain FX988_RS21160 PF01565 FAD binding domain FX988_RS21160 PF02913 FAD linked oxidases, C-terminal domain FX988_RS21205 PF03527 RHS protein FX988_RS21235 PF13657 HipA N-terminal domain FX988_RS21235 PF07804 HipA-like C-terminal domain FX988_RS21275 PF13426 PAS domain FX988_RS21275 PF00563 EAL domain FX988_RS21275 PF00990 Diguanylate cyclase, GGDEF domain FX988_RS21280 PF00216 Bacterial DNA-binding protein FX988_RS21305 PF13495 Phage integrase, N-terminal SAM-like domain FX988_RS21305 PF00589 Phage integrase family FX988_RS21350 PF00589 Phage integrase family FX988_RS21350 PF02899 Phage integrase, N-terminal SAM-like domain FX988_RS21400 PF00717 Peptidase S24-like FX988_RS21520 PF13614 AAA domain FX988_RS21550 PF03527 RHS protein FX988_RS21550 PF15606 Bacterial toxin 34 FX988_RS21550 PF05593 RHS Repeat FX988_RS21590 PF02463 RecF/RecN/SMC N terminal domain