C427_RS00005	SM00382	ATPases associated with a variety of cellular activities
C427_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
C427_RS00010	SM00480	DNA polymerase III beta subunit
C427_RS00020	SM00387	Histidine kinase-like ATPases
C427_RS00020	SM00433	TopoisomeraseII
C427_RS00060	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C427_RS00060	SM00474	3'-5' exonuclease
C427_RS00060	SM00475	5'-3' exonuclease
C427_RS00060	SM00482	DNA polymerase A domain
C427_RS00100	SM00257	Lysin motif
C427_RS00205	SM00382	ATPases associated with a variety of cellular activities
C427_RS00225	SM00220	Serine/Threonine protein kinases, catalytic domain
C427_RS00225	SM00364	Leucine-rich repeats, bacterial type
C427_RS00225	SM00369	Leucine-rich repeats, typical (most populated) subfamily
C427_RS00230	SM01126	C427_RS00230
C427_RS00285	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C427_RS00285	SM01232	C427_RS00285
C427_RS00335	SM00052	Putative diguanylate phosphodiesterase
C427_RS00335	SM00267	diguanylate cyclase
C427_RS00360	SM00354	helix_turn _helix lactose operon repressor
C427_RS00380	SM00028	Tetratricopeptide repeats
C427_RS00440	SM00450	Rhodanese Homology Domain
C427_RS00540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS00540	SM00387	Histidine kinase-like ATPases
C427_RS00540	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS00545	SM00448	cheY-homologous receiver domain
C427_RS00545	SM00862	Transcriptional regulatory protein, C terminal
C427_RS00585	SM01230	C427_RS00585
C427_RS00605	SM00387	Histidine kinase-like ATPases
C427_RS00605	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS00610	SM00448	cheY-homologous receiver domain
C427_RS00610	SM00862	Transcriptional regulatory protein, C terminal
C427_RS00635	SM00052	Putative diguanylate phosphodiesterase
C427_RS00670	SM00878	Biotin carboxylase C-terminal domain
C427_RS00690	SM01001	AIR carboxylase
C427_RS00700	SM00357	Cold shock protein domain
C427_RS00700	SM00382	ATPases associated with a variety of cellular activities
C427_RS00700	SM00959	Rho termination factor, N-terminal domain
C427_RS00710	SM00487	DEAD-like helicases superfamily
C427_RS00710	SM00490	helicase superfamily c-terminal domain
C427_RS00720	SM01004	Delta-aminolevulinic acid dehydratase
C427_RS00725	SM00267	diguanylate cyclase
C427_RS00815	SM00965	Secretin and TonB N terminus short domain
C427_RS00830	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C427_RS00890	SM00382	ATPases associated with a variety of cellular activities
C427_RS00910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C427_RS00910	SM00866	C427_RS00910
C427_RS00975	SM00382	ATPases associated with a variety of cellular activities
C427_RS00975	SM01086	C-terminal, D2-small domain, of ClpB protein
C427_RS01000	SM00487	DEAD-like helicases superfamily
C427_RS01000	SM00490	helicase superfamily c-terminal domain
C427_RS01005	SM00919	Malic enzyme, NAD binding domain
C427_RS01005	SM01274	C427_RS01005
C427_RS01055	SM00530	Helix-turn-helix XRE-family like proteins 
C427_RS01125	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C427_RS01125	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C427_RS01130	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
C427_RS01190	SM01012	C427_RS01190
C427_RS01195	SM00912	haemagglutination activity domain
C427_RS01225	SM00862	Transcriptional regulatory protein, C terminal
C427_RS01285	SM00346	helix_turn_helix isocitrate lyase regulation
C427_RS01330	SM00487	DEAD-like helicases superfamily
C427_RS01330	SM00490	helicase superfamily c-terminal domain
C427_RS01350	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C427_RS01350	SM00954	Region found in RelA / SpoT proteins
C427_RS01355	SM01409	C427_RS01355
C427_RS01360	SM00072	Guanylate kinase homologues.
C427_RS01365	SM01219	C427_RS01365
C427_RS01430	SM00271	DnaJ molecular chaperone homology domain
C427_RS01455	SM00479	C427_RS01455
C427_RS01485	SM00354	helix_turn _helix lactose operon repressor
C427_RS01495	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS01500	SM01038	Beta galactosidase small chain
C427_RS01530	SM01321	C427_RS01530
C427_RS01535	SM01126	C427_RS01535
C427_RS01570	SM00052	Putative diguanylate phosphodiesterase
C427_RS01575	SM00822	C427_RS01575
C427_RS01585	SM00487	DEAD-like helicases superfamily
C427_RS01585	SM00490	helicase superfamily c-terminal domain
C427_RS01610	SM00028	Tetratricopeptide repeats
C427_RS01620	SM00244	prohibitin homologues
C427_RS01625	SM00244	prohibitin homologues
C427_RS01645	SM01340	C427_RS01645
C427_RS01650	SM00257	Lysin motif
C427_RS01650	SM00646	C427_RS01650
C427_RS01725	SM00855	Phosphoglycerate mutase family
C427_RS01740	SM00487	DEAD-like helicases superfamily
C427_RS01740	SM00490	helicase superfamily c-terminal domain
C427_RS01740	SM00847	Helicase associated domain (HA2)  Add an annotation
C427_RS01750	SM00450	Rhodanese Homology Domain
C427_RS01750	SM00849	Metallo-beta-lactamase superfamily
C427_RS01770	SM00938	Nitrogen regulatory protein P-II
C427_RS01795	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
C427_RS01895	SM00900	C427_RS01895
C427_RS01965	SM00841	Elongation factor P, C-terminal
C427_RS01965	SM01185	C427_RS01965
C427_RS01990	SM00387	Histidine kinase-like ATPases
C427_RS01990	SM00433	TopoisomeraseII
C427_RS02045	SM00382	ATPases associated with a variety of cellular activities
C427_RS02070	SM00387	Histidine kinase-like ATPases
C427_RS02070	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS02140	SM00387	Histidine kinase-like ATPases
C427_RS02140	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS02140	SM00448	cheY-homologous receiver domain
C427_RS02145	SM00434	DNA Topoisomerase IV
C427_RS02160	SM00382	ATPases associated with a variety of cellular activities
C427_RS02165	SM00382	ATPases associated with a variety of cellular activities
C427_RS02165	SM00962	SRP54-type protein, GTPase domain
C427_RS02165	SM00963	SRP54-type protein, helical bundle domain
C427_RS02250	SM00382	ATPases associated with a variety of cellular activities
C427_RS02275	SM00609	Vault protein Inter-alpha-Trypsin domain
C427_RS02285	SM00448	cheY-homologous receiver domain
C427_RS02285	SM00862	Transcriptional regulatory protein, C terminal
C427_RS02290	SM00387	Histidine kinase-like ATPases
C427_RS02290	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS02305	SM00849	Metallo-beta-lactamase superfamily
C427_RS02365	SM00450	Rhodanese Homology Domain
C427_RS02380	SM00420	helix_turn_helix, Deoxyribose operon repressor
C427_RS02380	SM01134	C427_RS02380
C427_RS02390	SM00267	diguanylate cyclase
C427_RS02415	SM00924	MgtE intracellular N domain
C427_RS02425	SM00530	Helix-turn-helix XRE-family like proteins 
C427_RS02460	SM00062	Bacterial periplasmic substrate-binding proteins
C427_RS02465	SM00422	helix_turn_helix, mercury resistance
C427_RS02475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C427_RS02480	SM00382	ATPases associated with a variety of cellular activities
C427_RS02505	SM00822	C427_RS02505
C427_RS02670	SM00028	Tetratricopeptide repeats
C427_RS02675	SM00028	Tetratricopeptide repeats
C427_RS02715	SM00354	helix_turn _helix lactose operon repressor
C427_RS02745	SM00448	cheY-homologous receiver domain
C427_RS02750	SM00052	Putative diguanylate phosphodiesterase
C427_RS02750	SM00091	PAS domain
C427_RS02750	SM00267	diguanylate cyclase
C427_RS02765	SM00849	Metallo-beta-lactamase superfamily
C427_RS02770	SM00245	tail specific protease
C427_RS02830	SM00849	Metallo-beta-lactamase superfamily
C427_RS02855	SM00267	diguanylate cyclase
C427_RS02900	SM00422	helix_turn_helix, mercury resistance
C427_RS02915	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C427_RS02970	SM00486	DNA polymerase type-B family
C427_RS03025	SM00267	diguanylate cyclase
C427_RS03065	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C427_RS03065	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C427_RS03110	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C427_RS03125	SM01126	C427_RS03125
C427_RS03135	SM01350	C427_RS03135
C427_RS03155	SM00448	cheY-homologous receiver domain
C427_RS03160	SM00387	Histidine kinase-like ATPases
C427_RS03160	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS03165	SM00448	cheY-homologous receiver domain
C427_RS03175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C427_RS03180	SM00226	Low molecular weight phosphatase family
C427_RS03200	SM00267	diguanylate cyclase
C427_RS03355	SM01321	C427_RS03355
C427_RS03435	SM00903	Flavin reductase like domain
C427_RS03460	SM00387	Histidine kinase-like ATPases
C427_RS03460	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS03460	SM00448	cheY-homologous receiver domain
C427_RS03460	SM01358	C427_RS03460
C427_RS03495	SM00382	ATPases associated with a variety of cellular activities
C427_RS03540	SM00954	Region found in RelA / SpoT proteins
C427_RS03560	SM00020	Trypsin-like serine protease
C427_RS03615	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
C427_RS03630	SM00450	Rhodanese Homology Domain
C427_RS03635	SM00054	EF-hand, calcium binding motif
C427_RS03650	SM01116	C427_RS03650
C427_RS03655	SM00220	Serine/Threonine protein kinases, catalytic domain
C427_RS03655	SM00331	Sigma factor PP2C-like phosphatases
C427_RS03655	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
C427_RS03780	SM00842	Cell division protein FtsA
C427_RS03785	SM00864	Tubulin/FtsZ family, GTPase domain
C427_RS03785	SM00865	Tubulin/FtsZ family, C-terminal domain
C427_RS03800	SM00957	SecA DEAD-like domain
C427_RS03800	SM00958	SecA preprotein cross-linking domain
C427_RS03810	SM00829	Enoylreductase
C427_RS03845	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C427_RS03845	SM00387	Histidine kinase-like ATPases
C427_RS03845	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS03845	SM00448	cheY-homologous receiver domain
C427_RS04025	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C427_RS04025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS04040	SM00650	Ribosomal RNA adenine dimethylases
C427_RS04070	SM00271	DnaJ molecular chaperone homology domain
C427_RS04160	SM00905	Dihydroneopterin aldolase
C427_RS04200	SM00387	Histidine kinase-like ATPases
C427_RS04205	SM00448	cheY-homologous receiver domain
C427_RS04205	SM00862	Transcriptional regulatory protein, C terminal
C427_RS04210	SM00387	Histidine kinase-like ATPases
C427_RS04210	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS04390	SM00267	diguanylate cyclase
C427_RS04405	SM00861	Transketolase, pyrimidine binding domain
C427_RS04415	SM01321	C427_RS04415
C427_RS04425	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C427_RS04445	SM00855	Phosphoglycerate mutase family
C427_RS04470	SM00382	ATPases associated with a variety of cellular activities
C427_RS04475	SM01358	C427_RS04475
C427_RS04495	SM00729	Elongator protein 3, MiaB family, Radical SAM
C427_RS04510	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS04520	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C427_RS04535	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS04590	SM00347	helix_turn_helix multiple antibiotic resistance protein
C427_RS04615	SM00420	helix_turn_helix, Deoxyribose operon repressor
C427_RS04615	SM01134	C427_RS04615
C427_RS04625	SM00382	ATPases associated with a variety of cellular activities
C427_RS04630	SM00382	ATPases associated with a variety of cellular activities
C427_RS04635	SM00382	ATPases associated with a variety of cellular activities
C427_RS04640	SM00382	ATPases associated with a variety of cellular activities
C427_RS04675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C427_RS04675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS04690	SM00052	Putative diguanylate phosphodiesterase
C427_RS04690	SM00448	cheY-homologous receiver domain
C427_RS04695	SM00387	Histidine kinase-like ATPases
C427_RS04735	SM00028	Tetratricopeptide repeats
C427_RS04750	SM00347	helix_turn_helix multiple antibiotic resistance protein
C427_RS04760	SM00829	Enoylreductase
C427_RS04780	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C427_RS04780	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C427_RS04780	SM00493	C427_RS04780
C427_RS04785	SM00829	Enoylreductase
C427_RS04840	SM00357	Cold shock protein domain
C427_RS04875	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C427_RS04885	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS04965	SM00191	Integrin alpha (beta-propellor repeats).
C427_RS05005	SM00587	ZnF_C4 abd HLH domain containing kinases domain
C427_RS05020	SM00382	ATPases associated with a variety of cellular activities
C427_RS05035	SM00729	Elongator protein 3, MiaB family, Radical SAM
C427_RS05110	SM00028	Tetratricopeptide repeats
C427_RS05110	SM00220	Serine/Threonine protein kinases, catalytic domain
C427_RS05115	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C427_RS05115	SM00240	Forkhead associated domain
C427_RS05230	SM00448	cheY-homologous receiver domain
C427_RS05230	SM00862	Transcriptional regulatory protein, C terminal
C427_RS05250	SM00028	Tetratricopeptide repeats
C427_RS05270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C427_RS05270	SM00895	C427_RS05270
C427_RS05300	SM00855	Phosphoglycerate mutase family
C427_RS05325	SM00267	diguanylate cyclase
C427_RS05340	SM00267	diguanylate cyclase
C427_RS05365	SM00938	Nitrogen regulatory protein P-II
C427_RS05445	SM01230	C427_RS05445
C427_RS05455	SM00387	Histidine kinase-like ATPases
C427_RS05455	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS05460	SM00382	ATPases associated with a variety of cellular activities
C427_RS05460	SM00448	cheY-homologous receiver domain
C427_RS05465	SM00073	Histidine Phosphotransfer domain
C427_RS05470	SM00563	Phosphate acyltransferases
C427_RS05525	SM00090	RIO-like kinase
C427_RS05545	SM01321	C427_RS05545
C427_RS05600	SM00825	Beta-ketoacyl synthase
C427_RS05620	SM00271	DnaJ molecular chaperone homology domain
C427_RS05740	SM00100	Cyclic nucleotide-monophosphate binding domain
C427_RS05740	SM00419	helix_turn_helix, cAMP Regulatory protein
C427_RS05745	SM01007	Class II Aldolase and Adducin N-terminal domain
C427_RS05760	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C427_RS05795	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS05885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C427_RS05885	SM00895	C427_RS05885
C427_RS05895	SM00644	C427_RS05895
C427_RS05975	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C427_RS06005	SM00347	helix_turn_helix multiple antibiotic resistance protein
C427_RS06050	SM00387	Histidine kinase-like ATPases
C427_RS06085	SM00965	Secretin and TonB N terminus short domain
C427_RS06135	SM00861	Transketolase, pyrimidine binding domain
C427_RS06140	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C427_RS06200	SM00710	Parallel beta-helix repeats
C427_RS06255	SM00387	Histidine kinase-like ATPases
C427_RS06260	SM00382	ATPases associated with a variety of cellular activities
C427_RS06260	SM00448	cheY-homologous receiver domain
C427_RS06290	SM00729	Elongator protein 3, MiaB family, Radical SAM
C427_RS06305	SM00487	DEAD-like helicases superfamily
C427_RS06305	SM00490	helicase superfamily c-terminal domain
C427_RS06345	SM00487	DEAD-like helicases superfamily
C427_RS06345	SM00490	helicase superfamily c-terminal domain
C427_RS06375	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
C427_RS06385	SM00632	C427_RS06385
C427_RS06385	SM00642	Alpha-amylase domain
C427_RS06420	SM00382	ATPases associated with a variety of cellular activities
C427_RS06430	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C427_RS06465	SM01329	C427_RS06465
C427_RS06470	SM00917	LeuA allosteric (dimerisation) domain
C427_RS06485	SM01192	C427_RS06485
C427_RS06485	SM01193	C427_RS06485
C427_RS06500	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C427_RS06500	SM00534	ATPase domain of DNA mismatch repair MUTS family
C427_RS06510	SM00382	ATPases associated with a variety of cellular activities
C427_RS06515	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C427_RS06530	SM00382	ATPases associated with a variety of cellular activities
C427_RS06570	SM00028	Tetratricopeptide repeats
C427_RS06725	SM00984	UDP binding domain
C427_RS06735	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C427_RS06825	SM00904	Riboflavin kinase
C427_RS06945	SM00478	endonuclease III
C427_RS06945	SM00525	C427_RS06945
C427_RS06955	SM00900	C427_RS06955
C427_RS06995	SM00487	DEAD-like helicases superfamily
C427_RS06995	SM00490	helicase superfamily c-terminal domain
C427_RS07060	SM00382	ATPases associated with a variety of cellular activities
C427_RS07070	SM00267	diguanylate cyclase
C427_RS07155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C427_RS07155	SM00866	C427_RS07155
C427_RS07215	SM00052	Putative diguanylate phosphodiesterase
C427_RS07215	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C427_RS07215	SM00091	PAS domain
C427_RS07215	SM00267	diguanylate cyclase
C427_RS07230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C427_RS07290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C427_RS07315	SM00867	YceI-like domain 
C427_RS07325	SM00867	YceI-like domain 
C427_RS07405	SM00938	Nitrogen regulatory protein P-II
C427_RS07430	SM00382	ATPases associated with a variety of cellular activities
C427_RS07440	SM00493	C427_RS07440
C427_RS07445	SM00052	Putative diguanylate phosphodiesterase
C427_RS07450	SM00267	diguanylate cyclase
C427_RS07455	SM00387	Histidine kinase-like ATPases
C427_RS07480	SM00382	ATPases associated with a variety of cellular activities
C427_RS07535	SM00267	diguanylate cyclase
C427_RS07535	SM00448	cheY-homologous receiver domain
C427_RS07540	SM00387	Histidine kinase-like ATPases
C427_RS07540	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS07540	SM00448	cheY-homologous receiver domain
C427_RS07585	SM00316	Ribosomal protein S1-like RNA-binding domain
C427_RS07585	SM00322	K homology RNA-binding domain
C427_RS07600	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C427_RS07610	SM00642	Alpha-amylase domain
C427_RS07615	SM00642	Alpha-amylase domain
C427_RS07630	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C427_RS07640	SM00631	C427_RS07640
C427_RS07665	SM00363	S4 RNA-binding domain
C427_RS07760	SM00028	Tetratricopeptide repeats
C427_RS07765	SM00327	von Willebrand factor (vWF) type A domain
C427_RS07795	SM00052	Putative diguanylate phosphodiesterase
C427_RS07795	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C427_RS07795	SM00091	PAS domain
C427_RS07795	SM00267	diguanylate cyclase
C427_RS07805	SM00855	Phosphoglycerate mutase family
C427_RS07810	SM01091	Transporter associated domain
C427_RS07820	SM00382	ATPases associated with a variety of cellular activities
C427_RS07820	SM00962	SRP54-type protein, GTPase domain
C427_RS07820	SM00963	SRP54-type protein, helical bundle domain
C427_RS07825	SM00052	Putative diguanylate phosphodiesterase
C427_RS07825	SM00267	diguanylate cyclase
C427_RS07835	SM01038	Beta galactosidase small chain
C427_RS07855	SM00382	ATPases associated with a variety of cellular activities
C427_RS07900	SM01021	Bacteriorhodopsin-like protein
C427_RS07915	SM00387	Histidine kinase-like ATPases
C427_RS07915	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS07915	SM00448	cheY-homologous receiver domain
C427_RS07940	SM00829	Enoylreductase
C427_RS08015	SM00382	ATPases associated with a variety of cellular activities
C427_RS08070	SM00729	Elongator protein 3, MiaB family, Radical SAM
C427_RS08105	SM00382	ATPases associated with a variety of cellular activities
C427_RS08215	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C427_RS08220	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
C427_RS08290	SM00357	Cold shock protein domain
C427_RS08305	SM00316	Ribosomal protein S1-like RNA-binding domain
C427_RS08340	SM00731	SprT homologues.
C427_RS08395	SM00357	Cold shock protein domain
C427_RS08425	SM00840	C427_RS08425
C427_RS08440	SM00257	Lysin motif
C427_RS08445	SM00849	Metallo-beta-lactamase superfamily
C427_RS08460	SM00382	ATPases associated with a variety of cellular activities
C427_RS08535	SM00903	Flavin reductase like domain
C427_RS08570	SM00267	diguanylate cyclase
C427_RS08615	SM00347	helix_turn_helix multiple antibiotic resistance protein
C427_RS08630	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS08640	SM00704	CDGSH-type zinc finger. Function unknown.
C427_RS08680	SM00387	Histidine kinase-like ATPases
C427_RS08680	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS08685	SM00448	cheY-homologous receiver domain
C427_RS08685	SM00862	Transcriptional regulatory protein, C terminal
C427_RS08725	SM00448	cheY-homologous receiver domain
C427_RS08725	SM00862	Transcriptional regulatory protein, C terminal
C427_RS08765	SM00382	ATPases associated with a variety of cellular activities
C427_RS08775	SM00062	Bacterial periplasmic substrate-binding proteins
C427_RS08890	SM00028	Tetratricopeptide repeats
C427_RS08965	SM00347	helix_turn_helix multiple antibiotic resistance protein
C427_RS09070	SM01266	C427_RS09070
C427_RS09085	SM00830	Chorismate mutase type II
C427_RS09135	SM00861	Transketolase, pyrimidine binding domain
C427_RS09150	SM00881	CoA binding domain
C427_RS09185	SM00642	Alpha-amylase domain
C427_RS09205	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C427_RS09205	SM00091	PAS domain
C427_RS09205	SM00387	Histidine kinase-like ATPases
C427_RS09205	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS09205	SM01079	C427_RS09205
C427_RS09210	SM00421	helix_turn_helix, Lux Regulon
C427_RS09210	SM00448	cheY-homologous receiver domain
C427_RS09220	SM00244	prohibitin homologues
C427_RS09225	SM00244	prohibitin homologues
C427_RS09300	SM00382	ATPases associated with a variety of cellular activities
C427_RS09315	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C427_RS09430	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C427_RS09455	SM00346	helix_turn_helix isocitrate lyase regulation
C427_RS09495	SM00822	C427_RS09495
C427_RS09515	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C427_RS09555	SM00895	C427_RS09555
C427_RS09580	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C427_RS09680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C427_RS09680	SM00895	C427_RS09680
C427_RS09700	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS09800	SM00530	Helix-turn-helix XRE-family like proteins 
C427_RS09885	SM00530	Helix-turn-helix XRE-family like proteins 
C427_RS10060	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C427_RS10085	SM00873	B3/4 domain
C427_RS10085	SM00874	tRNA synthetase B5 domain
C427_RS10085	SM00896	Ferredoxin-fold anticodon binding domain
C427_RS10090	SM00411	bacterial (prokaryotic) histone like domain
C427_RS10115	SM00563	Phosphate acyltransferases
C427_RS10135	SM01005	Alanine racemase, C-terminal domain
C427_RS10150	SM00421	helix_turn_helix, Lux Regulon
C427_RS10150	SM00448	cheY-homologous receiver domain
C427_RS10165	SM00862	Transcriptional regulatory protein, C terminal
C427_RS10215	SM01126	C427_RS10215
C427_RS10255	SM01126	C427_RS10255
C427_RS10390	SM01130	C427_RS10390
C427_RS10450	SM00316	Ribosomal protein S1-like RNA-binding domain
C427_RS10455	SM00411	bacterial (prokaryotic) histone like domain
C427_RS10465	SM00028	Tetratricopeptide repeats
C427_RS10470	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C427_RS10475	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C427_RS10475	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C427_RS10480	SM00344	helix_turn_helix ASNC type
C427_RS10485	SM00843	C427_RS10485
C427_RS10495	SM00382	ATPases associated with a variety of cellular activities
C427_RS10575	SM00421	helix_turn_helix, Lux Regulon
C427_RS10575	SM00448	cheY-homologous receiver domain
C427_RS10580	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C427_RS10580	SM00465	GIY-YIG type nucleases (URI domain)
C427_RS10655	SM00487	DEAD-like helicases superfamily
C427_RS10655	SM00490	helicase superfamily c-terminal domain
C427_RS10685	SM00487	DEAD-like helicases superfamily
C427_RS10685	SM00490	helicase superfamily c-terminal domain
C427_RS10695	SM00822	C427_RS10695
C427_RS10745	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS10755	SM00267	diguanylate cyclase
C427_RS10800	SM00360	RNA recognition motif
C427_RS10805	SM00642	Alpha-amylase domain
C427_RS10835	SM00852	Probable molybdopterin binding domain
C427_RS10855	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C427_RS10965	SM00382	ATPases associated with a variety of cellular activities
C427_RS10970	SM00382	ATPases associated with a variety of cellular activities
C427_RS11055	SM00924	MgtE intracellular N domain
C427_RS11075	SM00947	Carbonic anhydrase
C427_RS11085	SM00487	DEAD-like helicases superfamily
C427_RS11085	SM00490	helicase superfamily c-terminal domain
C427_RS11140	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS11165	SM00382	ATPases associated with a variety of cellular activities
C427_RS11240	SM00448	cheY-homologous receiver domain
C427_RS11240	SM01012	C427_RS11240
C427_RS11260	SM00382	ATPases associated with a variety of cellular activities
C427_RS11285	SM00479	C427_RS11285
C427_RS11305	SM00382	ATPases associated with a variety of cellular activities
C427_RS11320	SM00841	Elongation factor P, C-terminal
C427_RS11320	SM01185	C427_RS11320
C427_RS11325	SM00487	DEAD-like helicases superfamily
C427_RS11325	SM00491	C427_RS11325
C427_RS11355	SM00341	Helicase and RNase D C-terminal
C427_RS11355	SM00474	3'-5' exonuclease
C427_RS11390	SM00634	Bacterial Ig-like domain (group 1)
C427_RS11400	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C427_RS11400	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C427_RS11400	SM00493	C427_RS11400
C427_RS11410	SM00479	C427_RS11410
C427_RS11410	SM00990	C427_RS11410
C427_RS11435	SM00382	ATPases associated with a variety of cellular activities
C427_RS11460	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C427_RS11525	SM00487	DEAD-like helicases superfamily
C427_RS11525	SM00490	helicase superfamily c-terminal domain
C427_RS11540	SM00363	S4 RNA-binding domain
C427_RS11580	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C427_RS11585	SM00822	C427_RS11585
C427_RS11595	SM00825	Beta-ketoacyl synthase
C427_RS11615	SM00382	ATPases associated with a variety of cellular activities
C427_RS11635	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C427_RS11640	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C427_RS11690	SM00116	Domain in cystathionine beta-synthase and other proteins.
C427_RS11695	SM00382	ATPases associated with a variety of cellular activities
C427_RS11695	SM00487	DEAD-like helicases superfamily
C427_RS11695	SM00490	helicase superfamily c-terminal domain
C427_RS11695	SM00847	Helicase associated domain (HA2)  Add an annotation
C427_RS11705	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C427_RS11710	SM00829	Enoylreductase
C427_RS11740	SM00047	Lysozyme subfamily 2
C427_RS11870	SM00382	ATPases associated with a variety of cellular activities
C427_RS11870	SM01086	C-terminal, D2-small domain, of ClpB protein
C427_RS11885	SM00155	Phospholipase D. Active site motifs.
C427_RS11935	SM00448	cheY-homologous receiver domain
C427_RS11935	SM00862	Transcriptional regulatory protein, C terminal
C427_RS11940	SM00387	Histidine kinase-like ATPases
C427_RS11940	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS11980	SM00867	YceI-like domain 
C427_RS11990	SM00052	Putative diguanylate phosphodiesterase
C427_RS11990	SM00091	PAS domain
C427_RS11990	SM00267	diguanylate cyclase
C427_RS12015	SM00116	Domain in cystathionine beta-synthase and other proteins.
C427_RS12020	SM00450	Rhodanese Homology Domain
C427_RS12040	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C427_RS12055	SM00100	Cyclic nucleotide-monophosphate binding domain
C427_RS12055	SM00419	helix_turn_helix, cAMP Regulatory protein
C427_RS12065	SM00421	helix_turn_helix, Lux Regulon
C427_RS12065	SM00448	cheY-homologous receiver domain
C427_RS12070	SM00448	cheY-homologous receiver domain
C427_RS12110	SM00382	ATPases associated with a variety of cellular activities
C427_RS12120	SM00981	C427_RS12120
C427_RS12160	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C427_RS12160	SM00245	tail specific protease
C427_RS12165	SM00945	ProQ/FINO family
C427_RS12210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C427_RS12210	SM00895	C427_RS12210
C427_RS12230	SM00220	Serine/Threonine protein kinases, catalytic domain
C427_RS12245	SM00861	Transketolase, pyrimidine binding domain
C427_RS12270	SM00028	Tetratricopeptide repeats
C427_RS12300	SM00354	helix_turn _helix lactose operon repressor
C427_RS12305	SM00642	Alpha-amylase domain
C427_RS12350	SM00382	ATPases associated with a variety of cellular activities
C427_RS12395	SM00829	Enoylreductase
C427_RS12415	SM00893	Electron transfer flavoprotein domain
C427_RS12420	SM00893	Electron transfer flavoprotein domain
C427_RS12465	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS12510	SM00852	Probable molybdopterin binding domain
C427_RS12520	SM00729	Elongator protein 3, MiaB family, Radical SAM
C427_RS12540	SM00642	Alpha-amylase domain
C427_RS12555	SM00450	Rhodanese Homology Domain
C427_RS12600	SM00052	Putative diguanylate phosphodiesterase
C427_RS12615	SM01092	CO dehydrogenase flavoprotein C-terminal domain
C427_RS12620	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C427_RS12665	SM00953	C427_RS12665
C427_RS12690	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS12730	SM00292	breast cancer carboxy-terminal domain
C427_RS12730	SM00532	Ligase N family
C427_RS12735	SM00771	ZipA, C-terminal domain (FtsZ-binding)
C427_RS12780	SM00267	diguanylate cyclase
C427_RS12805	SM00382	ATPases associated with a variety of cellular activities
C427_RS12815	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C427_RS12815	SM00267	diguanylate cyclase
C427_RS12850	SM00344	helix_turn_helix ASNC type
C427_RS12855	SM00344	helix_turn_helix ASNC type
C427_RS12925	SM00382	ATPases associated with a variety of cellular activities
C427_RS12955	SM00487	DEAD-like helicases superfamily
C427_RS12955	SM00490	helicase superfamily c-terminal domain
C427_RS12955	SM00982	C427_RS12955
C427_RS12955	SM01058	CarD-like/TRCF domain
C427_RS13055	SM00729	Elongator protein 3, MiaB family, Radical SAM
C427_RS13070	SM00116	Domain in cystathionine beta-synthase and other proteins.
C427_RS13070	SM01091	Transporter associated domain
C427_RS13110	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS13145	SM00851	MGS-like domain
C427_RS13145	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C427_RS13150	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C427_RS13170	SM00271	DnaJ molecular chaperone homology domain
C427_RS13185	SM00387	Histidine kinase-like ATPases
C427_RS13185	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS13185	SM00448	cheY-homologous receiver domain
C427_RS13210	SM00421	helix_turn_helix, Lux Regulon
C427_RS13210	SM00448	cheY-homologous receiver domain
C427_RS13365	SM00052	Putative diguanylate phosphodiesterase
C427_RS13365	SM00267	diguanylate cyclase
C427_RS13395	SM00460	Transglutaminase/protease-like homologues
C427_RS13400	SM00382	ATPases associated with a variety of cellular activities
C427_RS13445	SM00899	C427_RS13445
C427_RS13455	SM00226	Low molecular weight phosphatase family
C427_RS13465	SM00260	Two component signalling adaptor domain
C427_RS13465	SM00448	cheY-homologous receiver domain
C427_RS13505	SM00729	Elongator protein 3, MiaB family, Radical SAM
C427_RS13505	SM00876	Biotin and Thiamin Synthesis associated domain
C427_RS13525	SM00448	cheY-homologous receiver domain
C427_RS13525	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C427_RS13535	SM00937	C427_RS13535
C427_RS13560	SM01400	C427_RS13560
C427_RS13635	SM00448	cheY-homologous receiver domain
C427_RS13635	SM00850	LytTr DNA-binding domain
C427_RS13655	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C427_RS13695	SM00387	Histidine kinase-like ATPases
C427_RS13710	SM00882	Coenzyme A transferase
C427_RS13715	SM00882	Coenzyme A transferase
C427_RS13720	SM00487	DEAD-like helicases superfamily
C427_RS13720	SM00490	helicase superfamily c-terminal domain
C427_RS13725	SM00267	diguanylate cyclase
C427_RS13820	SM00257	Lysin motif
C427_RS13830	SM00530	Helix-turn-helix XRE-family like proteins 
C427_RS13940	SM00382	ATPases associated with a variety of cellular activities
C427_RS13940	SM00448	cheY-homologous receiver domain
C427_RS13950	SM00387	Histidine kinase-like ATPases
C427_RS13950	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS13970	SM00382	ATPases associated with a variety of cellular activities
C427_RS14005	SM00448	cheY-homologous receiver domain
C427_RS14010	SM00830	Chorismate mutase type II
C427_RS14015	SM01387	C427_RS14015
C427_RS14035	SM00316	Ribosomal protein S1-like RNA-binding domain
C427_RS14075	SM00382	ATPases associated with a variety of cellular activities
C427_RS14110	SM00450	Rhodanese Homology Domain
C427_RS14120	SM00487	DEAD-like helicases superfamily
C427_RS14120	SM00490	helicase superfamily c-terminal domain
C427_RS14125	SM00448	cheY-homologous receiver domain
C427_RS14125	SM00850	LytTr DNA-binding domain
C427_RS14170	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C427_RS14190	SM01217	C427_RS14190
C427_RS14215	SM00479	C427_RS14215
C427_RS14220	SM00116	Domain in cystathionine beta-synthase and other proteins.
C427_RS14285	SM01321	C427_RS14285
C427_RS14310	SM00421	helix_turn_helix, Lux Regulon
C427_RS14310	SM00448	cheY-homologous receiver domain
C427_RS14360	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C427_RS14370	SM00226	Low molecular weight phosphatase family
C427_RS14385	SM00052	Putative diguanylate phosphodiesterase
C427_RS14390	SM00862	Transcriptional regulatory protein, C terminal
C427_RS14425	SM00052	Putative diguanylate phosphodiesterase
C427_RS14425	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C427_RS14480	SM00382	ATPases associated with a variety of cellular activities
C427_RS14490	SM01103	C427_RS14490
C427_RS14560	SM00936	Penicillin-binding protein 5, C-terminal domain 
C427_RS14575	SM00729	Elongator protein 3, MiaB family, Radical SAM
C427_RS14610	SM00267	diguanylate cyclase
C427_RS14630	SM00344	helix_turn_helix ASNC type
C427_RS14700	SM00267	diguanylate cyclase
C427_RS14705	SM00382	ATPases associated with a variety of cellular activities
C427_RS14775	SM00422	helix_turn_helix, mercury resistance
C427_RS14795	SM00870	C427_RS14795
C427_RS14800	SM00357	Cold shock protein domain
C427_RS14820	SM00463	Small MutS-related domain
C427_RS14825	SM00382	ATPases associated with a variety of cellular activities
C427_RS14825	SM00448	cheY-homologous receiver domain
C427_RS14845	SM00474	3'-5' exonuclease
C427_RS14920	SM00448	cheY-homologous receiver domain
C427_RS14925	SM00387	Histidine kinase-like ATPases
C427_RS14925	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS14930	SM00989	C427_RS14930
C427_RS14945	SM00073	Histidine Phosphotransfer domain
C427_RS15000	SM00836	DALR anticodon binding domain
C427_RS15000	SM01016	Arginyl tRNA synthetase N terminal dom
C427_RS15010	SM00530	Helix-turn-helix XRE-family like proteins 
C427_RS15080	SM00028	Tetratricopeptide repeats
C427_RS15120	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C427_RS15125	SM00344	helix_turn_helix ASNC type
C427_RS15130	SM00091	PAS domain
C427_RS15130	SM00382	ATPases associated with a variety of cellular activities
C427_RS15165	SM00382	ATPases associated with a variety of cellular activities
C427_RS15190	SM00382	ATPases associated with a variety of cellular activities
C427_RS15235	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C427_RS15255	SM01018	B12 binding domain
C427_RS15285	SM00260	Two component signalling adaptor domain
C427_RS15290	SM00260	Two component signalling adaptor domain
C427_RS15300	SM00448	cheY-homologous receiver domain
C427_RS15305	SM00073	Histidine Phosphotransfer domain
C427_RS15305	SM00260	Two component signalling adaptor domain
C427_RS15305	SM00387	Histidine kinase-like ATPases
C427_RS15305	SM01231	C427_RS15305
C427_RS15315	SM00448	cheY-homologous receiver domain
C427_RS15330	SM00382	ATPases associated with a variety of cellular activities
C427_RS15330	SM00962	SRP54-type protein, GTPase domain
C427_RS15390	SM00382	ATPases associated with a variety of cellular activities
C427_RS15415	SM00382	ATPases associated with a variety of cellular activities
C427_RS15415	SM00448	cheY-homologous receiver domain
C427_RS15420	SM00387	Histidine kinase-like ATPases
C427_RS15420	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS15425	SM00382	ATPases associated with a variety of cellular activities
C427_RS15500	SM00858	C427_RS15500
C427_RS15580	SM00047	Lysozyme subfamily 2
C427_RS15625	SM00138	Methyltransferase, chemotaxis proteins 
C427_RS15630	SM00260	Two component signalling adaptor domain
C427_RS15630	SM00448	cheY-homologous receiver domain
C427_RS15635	SM00858	C427_RS15635
C427_RS15695	SM00487	DEAD-like helicases superfamily
C427_RS15715	SM00857	Resolvase, N terminal domain
C427_RS15845	SM00479	C427_RS15845
C427_RS15870	SM01211	C427_RS15870
C427_RS15875	SM00062	Bacterial periplasmic substrate-binding proteins
C427_RS15915	SM00116	Domain in cystathionine beta-synthase and other proteins.
C427_RS15915	SM01240	C427_RS15915
C427_RS15925	SM00267	diguanylate cyclase
C427_RS15925	SM00448	cheY-homologous receiver domain
C427_RS15935	SM00564	beta-propeller repeat
C427_RS15960	SM00028	Tetratricopeptide repeats
C427_RS15960	SM00257	Lysin motif
C427_RS15970	SM00562	C427_RS15970
C427_RS15985	SM00411	bacterial (prokaryotic) histone like domain
C427_RS15990	SM00382	ATPases associated with a variety of cellular activities
C427_RS15990	SM00464	Found in ATP-dependent protease La (LON)
C427_RS15995	SM00382	ATPases associated with a variety of cellular activities
C427_RS15995	SM00994	ClpX C4-type zinc finger
C427_RS15995	SM01086	C-terminal, D2-small domain, of ClpB protein
C427_RS16075	SM00382	ATPases associated with a variety of cellular activities
C427_RS16100	SM00358	Double-stranded RNA binding motif
C427_RS16100	SM00535	Ribonuclease III family
C427_RS16110	SM00838	Elongation factor G C-terminus
C427_RS16195	SM00028	Tetratricopeptide repeats
C427_RS16200	SM00382	ATPases associated with a variety of cellular activities
C427_RS16200	SM01086	C-terminal, D2-small domain, of ClpB protein
C427_RS16210	SM00363	S4 RNA-binding domain
C427_RS16300	SM00861	Transketolase, pyrimidine binding domain
C427_RS16375	SM00382	ATPases associated with a variety of cellular activities
C427_RS16380	SM00635	Bacterial Ig-like domain 2
C427_RS16395	SM00382	ATPases associated with a variety of cellular activities
C427_RS16515	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
C427_RS16540	SM00829	Enoylreductase
C427_RS16555	SM00855	Phosphoglycerate mutase family
C427_RS16580	SM00729	Elongator protein 3, MiaB family, Radical SAM
C427_RS16650	SM00507	HNH nucleases
C427_RS16705	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C427_RS16710	SM01007	Class II Aldolase and Adducin N-terminal domain
C427_RS16760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C427_RS16760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS16785	SM00481	DNA polymerase alpha chain like domain
C427_RS16845	SM00448	cheY-homologous receiver domain
C427_RS16845	SM00862	Transcriptional regulatory protein, C terminal
C427_RS16850	SM00387	Histidine kinase-like ATPases
C427_RS16870	SM00905	Dihydroneopterin aldolase
C427_RS16885	SM00382	ATPases associated with a variety of cellular activities
C427_RS16960	SM00028	Tetratricopeptide repeats
C427_RS16960	SM00448	cheY-homologous receiver domain
C427_RS16990	SM00422	helix_turn_helix, mercury resistance
C427_RS17010	SM00878	Biotin carboxylase C-terminal domain
C427_RS17110	SM00382	ATPases associated with a variety of cellular activities
C427_RS17115	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C427_RS17130	SM00091	PAS domain
C427_RS17130	SM00382	ATPases associated with a variety of cellular activities
C427_RS17165	SM00382	ATPases associated with a variety of cellular activities
C427_RS17205	SM00267	diguanylate cyclase
C427_RS17210	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS17255	SM00977	TilS substrate C-terminal domain
C427_RS17265	SM00481	DNA polymerase alpha chain like domain
C427_RS17295	SM00935	Outer membrane protein (OmpH-like)
C427_RS17355	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C427_RS17360	SM00563	Phosphate acyltransferases
C427_RS17380	SM00271	DnaJ molecular chaperone homology domain
C427_RS17460	SM01323	C427_RS17460
C427_RS17475	SM00267	diguanylate cyclase
C427_RS17475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS17485	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C427_RS17485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS17485	SM01049	C427_RS17485
C427_RS17545	SM00382	ATPases associated with a variety of cellular activities
C427_RS17560	SM00098	Alkaline phosphatase homologues
C427_RS17645	SM00028	Tetratricopeptide repeats
C427_RS17955	SM00448	cheY-homologous receiver domain
C427_RS18000	SM00237	Domains in Na-Ca exchangers and integrin-beta4
C427_RS18115	SM00671	Sel1-like repeats.
C427_RS18165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C427_RS18165	SM00866	C427_RS18165
C427_RS18195	SM00028	Tetratricopeptide repeats
C427_RS18210	SM00829	Enoylreductase
C427_RS18280	SM00644	C427_RS18280
C427_RS18300	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C427_RS18410	SM00448	cheY-homologous receiver domain
C427_RS18430	SM00387	Histidine kinase-like ATPases
C427_RS18430	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS18440	SM00448	cheY-homologous receiver domain
C427_RS18440	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C427_RS18445	SM00448	cheY-homologous receiver domain
C427_RS18470	SM00098	Alkaline phosphatase homologues
C427_RS18515	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS18620	SM00487	DEAD-like helicases superfamily
C427_RS18620	SM00490	helicase superfamily c-terminal domain
C427_RS18650	SM00091	PAS domain
C427_RS18650	SM00387	Histidine kinase-like ATPases
C427_RS18650	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS18690	SM00100	Cyclic nucleotide-monophosphate binding domain
C427_RS18690	SM00419	helix_turn_helix, cAMP Regulatory protein
C427_RS18720	SM00822	C427_RS18720
C427_RS18755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS18755	SM00387	Histidine kinase-like ATPases
C427_RS18755	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS18760	SM00448	cheY-homologous receiver domain
C427_RS18760	SM00862	Transcriptional regulatory protein, C terminal
C427_RS18780	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C427_RS18810	SM00382	ATPases associated with a variety of cellular activities
C427_RS18825	SM00465	GIY-YIG type nucleases (URI domain)
C427_RS18860	SM00052	Putative diguanylate phosphodiesterase
C427_RS18860	SM00267	diguanylate cyclase
C427_RS18905	SM00028	Tetratricopeptide repeats
C427_RS18965	SM00450	Rhodanese Homology Domain
C427_RS19020	SM00662	RNA polymerases D
C427_RS19025	SM00363	S4 RNA-binding domain
C427_RS19025	SM01390	C427_RS19025
C427_RS19085	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C427_RS19090	SM01374	C427_RS19090
C427_RS19110	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C427_RS19115	SM00316	Ribosomal protein S1-like RNA-binding domain
C427_RS19115	SM00357	Cold shock protein domain
C427_RS19115	SM00955	C427_RS19115
C427_RS19125	SM00671	Sel1-like repeats.
C427_RS19150	SM00116	Domain in cystathionine beta-synthase and other proteins.
C427_RS19160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS19160	SM00387	Histidine kinase-like ATPases
C427_RS19160	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS19165	SM00448	cheY-homologous receiver domain
C427_RS19165	SM00862	Transcriptional regulatory protein, C terminal
C427_RS19180	SM00851	MGS-like domain
C427_RS19190	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C427_RS19275	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
C427_RS19460	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS19565	SM00822	C427_RS19565
C427_RS19660	SM00530	Helix-turn-helix XRE-family like proteins 
C427_RS19690	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS19700	SM00382	ATPases associated with a variety of cellular activities
C427_RS19840	SM01321	C427_RS19840
C427_RS19875	SM01321	C427_RS19875
C427_RS19890	SM00382	ATPases associated with a variety of cellular activities
C427_RS19915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS19915	SM00387	Histidine kinase-like ATPases
C427_RS19915	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS19920	SM00448	cheY-homologous receiver domain
C427_RS19920	SM00862	Transcriptional regulatory protein, C terminal
C427_RS19950	SM00028	Tetratricopeptide repeats
C427_RS19965	SM00487	DEAD-like helicases superfamily
C427_RS19965	SM00490	helicase superfamily c-terminal domain
C427_RS20165	SM00382	ATPases associated with a variety of cellular activities
C427_RS20250	SM00028	Tetratricopeptide repeats
C427_RS20260	SM00564	beta-propeller repeat
C427_RS20280	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C427_RS20310	SM00354	helix_turn _helix lactose operon repressor
C427_RS20345	SM00631	C427_RS20345
C427_RS20445	SM00448	cheY-homologous receiver domain
C427_RS20505	SM00838	Elongation factor G C-terminus
C427_RS20505	SM00889	Elongation factor G, domain IV
C427_RS20520	SM00663	RNA polymerase I subunit A N-terminus
C427_RS20550	SM00649	Ribosomal protein L11/L12
C427_RS20555	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C427_RS20555	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C427_RS20585	SM00382	ATPases associated with a variety of cellular activities
C427_RS20625	SM00487	DEAD-like helicases superfamily
C427_RS20625	SM00490	helicase superfamily c-terminal domain
C427_RS20635	SM00062	Bacterial periplasmic substrate-binding proteins
C427_RS20645	SM00563	Phosphate acyltransferases
C427_RS20685	SM00421	helix_turn_helix, Lux Regulon
C427_RS20685	SM00448	cheY-homologous receiver domain
C427_RS20695	SM00245	tail specific protease
C427_RS20710	SM00448	cheY-homologous receiver domain
C427_RS20710	SM00862	Transcriptional regulatory protein, C terminal
C427_RS20715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS20715	SM00387	Histidine kinase-like ATPases
C427_RS20715	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS20835	SM00895	C427_RS20835
C427_RS20840	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS20855	SM00382	ATPases associated with a variety of cellular activities
C427_RS20855	SM00670	Large family of predicted nucleotide-binding domains
C427_RS20860	SM00487	DEAD-like helicases superfamily
C427_RS20860	SM00490	helicase superfamily c-terminal domain
C427_RS20890	SM00267	diguanylate cyclase
C427_RS20895	SM00448	cheY-homologous receiver domain
C427_RS20905	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C427_RS20915	SM00927	DNA mismatch repair enzyme MutH
C427_RS20930	SM01118	C427_RS20930
C427_RS20935	SM00287	Bacterial SH3 domain homologues
C427_RS20970	SM00257	Lysin motif
C427_RS21085	SM00883	Chaperonin 10 Kd subunit
C427_RS21110	SM00736	Dystroglycan-type cadherin-like domains.
C427_RS21160	SM00487	DEAD-like helicases superfamily
C427_RS21160	SM00490	helicase superfamily c-terminal domain
C427_RS21180	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS21215	SM00862	Transcriptional regulatory protein, C terminal
C427_RS21230	SM00091	PAS domain
C427_RS21230	SM00267	diguanylate cyclase
C427_RS21240	SM00919	Malic enzyme, NAD binding domain
C427_RS21240	SM01274	C427_RS21240
C427_RS21250	SM00842	Cell division protein FtsA
C427_RS21270	SM00965	Secretin and TonB N terminus short domain
C427_RS21340	SM01150	C427_RS21340
C427_RS21420	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C427_RS21425	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C427_RS21460	SM00382	ATPases associated with a variety of cellular activities
C427_RS21470	SM00116	Domain in cystathionine beta-synthase and other proteins.
C427_RS21490	SM00382	ATPases associated with a variety of cellular activities
C427_RS21525	SM00924	MgtE intracellular N domain
C427_RS21545	SM00091	PAS domain
C427_RS21545	SM00387	Histidine kinase-like ATPases
C427_RS21545	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS21545	SM00448	cheY-homologous receiver domain
C427_RS21595	SM00028	Tetratricopeptide repeats
C427_RS21615	SM00450	Rhodanese Homology Domain
C427_RS21625	SM00363	S4 RNA-binding domain
C427_RS21640	SM00344	helix_turn_helix ASNC type
C427_RS21710	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C427_RS21725	SM00052	Putative diguanylate phosphodiesterase
C427_RS21725	SM00267	diguanylate cyclase
C427_RS21795	SM00028	Tetratricopeptide repeats
C427_RS21835	SM00322	K homology RNA-binding domain
C427_RS21870	SM01403	C427_RS21870
C427_RS21880	SM00382	ATPases associated with a variety of cellular activities
C427_RS21905	SM00838	Elongation factor G C-terminus
C427_RS21905	SM00889	Elongation factor G, domain IV
C427_RS21965	SM01126	C427_RS21965
C427_RS21995	SM00360	RNA recognition motif
C427_RS22020	SM00052	Putative diguanylate phosphodiesterase
C427_RS22020	SM00267	diguanylate cyclase
C427_RS22125	SM00341	Helicase and RNase D C-terminal
C427_RS22125	SM00487	DEAD-like helicases superfamily
C427_RS22125	SM00490	helicase superfamily c-terminal domain
C427_RS22125	SM00956	C427_RS22125
C427_RS22135	SM00563	Phosphate acyltransferases
C427_RS22140	SM00563	Phosphate acyltransferases
C427_RS22210	SM00014	Acid phosphatase homologues
C427_RS22240	SM00971	Serine acetyltransferase, N-terminal
C427_RS22250	SM00267	diguanylate cyclase
C427_RS22250	SM00448	cheY-homologous receiver domain
C427_RS22265	SM00267	diguanylate cyclase
C427_RS22265	SM00448	cheY-homologous receiver domain
C427_RS22270	SM00341	Helicase and RNase D C-terminal
C427_RS22270	SM00487	DEAD-like helicases superfamily
C427_RS22270	SM00490	helicase superfamily c-terminal domain
C427_RS22270	SM00956	C427_RS22270
C427_RS22275	SM00382	ATPases associated with a variety of cellular activities
C427_RS22365	SM00876	Biotin and Thiamin Synthesis associated domain
C427_RS22420	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS22445	SM00965	Secretin and TonB N terminus short domain
C427_RS22450	SM00382	ATPases associated with a variety of cellular activities
C427_RS22545	SM00316	Ribosomal protein S1-like RNA-binding domain
C427_RS22565	SM00634	Bacterial Ig-like domain (group 1)
C427_RS22580	SM00052	Putative diguanylate phosphodiesterase
C427_RS22580	SM00267	diguanylate cyclase
C427_RS22580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS22605	SM00382	ATPases associated with a variety of cellular activities
C427_RS22635	SM00244	prohibitin homologues
C427_RS22665	SM00769	Water Stress and Hypersensitive response
C427_RS22700	SM00448	cheY-homologous receiver domain
C427_RS22750	SM00788	Adenylosuccinate synthetase
C427_RS22765	SM00886	Stress responsive A/B Barrel Domain
C427_RS22840	SM00563	Phosphate acyltransferases
C427_RS22920	SM00631	C427_RS22920
C427_RS22940	SM00316	Ribosomal protein S1-like RNA-binding domain
C427_RS22940	SM00732	Likely ribonuclease with RNase H fold.
C427_RS23045	SM00320	WD40 repeats
C427_RS23060	SM00382	ATPases associated with a variety of cellular activities
C427_RS23090	SM00342	helix_turn_helix, arabinose operon control protein
C427_RS23105	SM00867	YceI-like domain 
C427_RS23170	SM00382	ATPases associated with a variety of cellular activities
C427_RS23185	SM00363	S4 RNA-binding domain
C427_RS23195	SM00267	diguanylate cyclase
C427_RS23200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C427_RS23200	SM00387	Histidine kinase-like ATPases
C427_RS23200	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS23205	SM00448	cheY-homologous receiver domain
C427_RS23205	SM00862	Transcriptional regulatory protein, C terminal
C427_RS23245	SM00382	ATPases associated with a variety of cellular activities
C427_RS23275	SM01209	C427_RS23275
C427_RS23275	SM01210	C427_RS23275
C427_RS23405	SM00947	Carbonic anhydrase
C427_RS23420	SM00421	helix_turn_helix, Lux Regulon
C427_RS23420	SM00448	cheY-homologous receiver domain
C427_RS23425	SM00028	Tetratricopeptide repeats
C427_RS23450	SM00387	Histidine kinase-like ATPases
C427_RS23450	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS23450	SM00448	cheY-homologous receiver domain
C427_RS23475	SM00382	ATPases associated with a variety of cellular activities
C427_RS23500	SM00988	UreE urease accessory protein, N-terminal domain
C427_RS23570	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C427_RS23665	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C427_RS23680	SM01144	C427_RS23680
C427_RS23700	SM00387	Histidine kinase-like ATPases
C427_RS23700	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS23700	SM00448	cheY-homologous receiver domain
C427_RS23735	SM00448	cheY-homologous receiver domain
C427_RS23735	SM00850	LytTr DNA-binding domain
C427_RS23760	SM00382	ATPases associated with a variety of cellular activities
C427_RS23800	SM00470	ParB-like nuclease domain
C427_RS23815	SM01228	C427_RS23815
C427_RS23850	SM01234	C427_RS23850
C427_RS23945	SM00387	Histidine kinase-like ATPases
C427_RS23950	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS24105	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C427_RS24120	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C427_RS24130	SM00267	diguanylate cyclase
C427_RS24135	SM00052	Putative diguanylate phosphodiesterase
C427_RS24195	SM01005	Alanine racemase, C-terminal domain
C427_RS24200	SM00387	Histidine kinase-like ATPases
C427_RS24210	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C427_RS24210	SM00091	PAS domain
C427_RS24210	SM00387	Histidine kinase-like ATPases
C427_RS24210	SM00388	His Kinase A (phosphoacceptor) domain
C427_RS24210	SM01079	C427_RS24210
C427_RS24275	SM00028	Tetratricopeptide repeats
