locus-tag class description AT984_RS00025 PF13193 AMP-binding enzyme C-terminal domain AT984_RS00025 PF00501 AMP-binding enzyme AT984_RS00040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AT984_RS00045 PF01037 Lrp/AsnC ligand binding domain AT984_RS00050 PF13847 Methyltransferase domain AT984_RS00080 PF03144 Elongation factor Tu domain 2 AT984_RS00080 PF00009 Elongation factor Tu GTP binding domain AT984_RS00080 PF03764 Elongation factor G, domain IV AT984_RS00080 PF14492 Elongation Factor G, domain II AT984_RS00080 PF00679 Elongation factor G C-terminus AT984_RS00085 PF05981 CreA protein AT984_RS00090 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS00095 PF00005 ABC transporter AT984_RS00100 PF00005 ABC transporter AT984_RS00100 PF12399 Branched-chain amino acid ATP-binding cassette transporter AT984_RS00115 PF00265 Thymidine kinase AT984_RS00130 PF07992 Pyridine nucleotide-disulphide oxidoreductase AT984_RS00130 PF17806 Sarcosine oxidase A3 domain AT984_RS00140 PF01266 FAD dependent oxidoreductase AT984_RS00145 PF05544 Proline racemase AT984_RS00150 PF00392 Bacterial regulatory proteins, gntR family AT984_RS00150 PF07729 FCD domain AT984_RS00155 PF02699 Preprotein translocase subunit AT984_RS00160 PF13721 SecD export protein N-terminal TM region AT984_RS00160 PF07549 SecD/SecF GG Motif AT984_RS00160 PF02355 Protein export membrane protein AT984_RS00165 PF02355 Protein export membrane protein AT984_RS00165 PF07549 SecD/SecF GG Motif AT984_RS00175 PF04361 Protein of unknown function (DUF494) AT984_RS00180 PF02481 DNA recombination-mediator protein A AT984_RS00180 PF17782 DprA winged helix domain AT984_RS00190 PF01327 Polypeptide deformylase AT984_RS00195 PF02911 Formyl transferase, C-terminal domain AT984_RS00195 PF00551 Formyl transferase AT984_RS00200 PF01435 Peptidase family M48 AT984_RS00225 PF00162 Phosphoglycerate kinase AT984_RS00235 PF08448 PAS fold AT984_RS00235 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS00240 PF03949 Malic enzyme, NAD binding domain AT984_RS00240 PF01515 Phosphate acetyl/butaryl transferase AT984_RS00240 PF00390 Malic enzyme, N-terminal domain AT984_RS00245 PF00224 Pyruvate kinase, barrel domain AT984_RS00245 PF02887 Pyruvate kinase, alpha/beta domain AT984_RS00260 PF01116 Fructose-bisphosphate aldolase class-II AT984_RS00265 PF01259 SAICAR synthetase AT984_RS00275 PF00085 Thioredoxin AT984_RS00280 PF00731 AIR carboxylase AT984_RS00285 PF02222 ATP-grasp domain AT984_RS00285 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AT984_RS00290 PF03481 Putative GTP-binding controlling metal-binding AT984_RS00290 PF01300 Telomere recombination AT984_RS00300 PF00814 Glycoprotease family AT984_RS00310 PF03167 Uracil DNA glycosylase superfamily AT984_RS00330 PF00043 Glutathione S-transferase, C-terminal domain AT984_RS00330 PF02798 Glutathione S-transferase, N-terminal domain AT984_RS00335 PF10145 Phage-related minor tail protein AT984_RS00335 PF01464 Transglycosylase SLT domain AT984_RS00335 PF01551 Peptidase family M23 AT984_RS00340 PF01812 5-formyltetrahydrofolate cyclo-ligase family AT984_RS00350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS00350 PF03466 LysR substrate binding domain AT984_RS00375 PF00294 pfkB family carbohydrate kinase AT984_RS00385 PF00557 Metallopeptidase family M24 AT984_RS00395 PF09286 Pro-kumamolisin, activation domain AT984_RS00395 PF00082 Subtilase family AT984_RS00400 PF03922 OmpW family AT984_RS00405 PF00072 Response regulator receiver domain AT984_RS00405 PF00196 Bacterial regulatory proteins, luxR family AT984_RS00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS00410 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS00410 PF00989 PAS fold AT984_RS00415 PF00083 Sugar (and other) transporter AT984_RS00420 PF02219 Methylenetetrahydrofolate reductase AT984_RS00425 PF01728 FtsJ-like methyltransferase AT984_RS00425 PF01479 S4 domain AT984_RS00430 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AT984_RS00430 PF05221 S-adenosyl-L-homocysteine hydrolase AT984_RS00445 PF00072 Response regulator receiver domain AT984_RS00450 PF06224 Winged helix DNA-binding domain AT984_RS00455 PF00563 EAL domain AT984_RS00455 PF01590 GAF domain AT984_RS00455 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS00455 PF00360 Phytochrome region AT984_RS00460 PF02773 S-adenosylmethionine synthetase, C-terminal domain AT984_RS00460 PF02772 S-adenosylmethionine synthetase, central domain AT984_RS00460 PF00438 S-adenosylmethionine synthetase, N-terminal domain AT984_RS00470 PF03279 Bacterial lipid A biosynthesis acyltransferase AT984_RS00475 PF01678 Diaminopimelate epimerase AT984_RS00485 PF00589 Phage integrase family AT984_RS00485 PF02899 Phage integrase, N-terminal SAM-like domain AT984_RS00495 PF17785 PUA-like domain AT984_RS00495 PF10672 S-adenosylmethionine-dependent methyltransferase AT984_RS00500 PF01037 Lrp/AsnC ligand binding domain AT984_RS00505 PF01380 SIS domain AT984_RS00515 PF01142 tRNA pseudouridine synthase D (TruD) AT984_RS00525 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS00525 PF00672 HAMP domain AT984_RS00530 PF00072 Response regulator receiver domain AT984_RS00530 PF00486 Transcriptional regulatory protein, C terminal AT984_RS00540 PF00576 HIUase/Transthyretin family AT984_RS00545 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AT984_RS00545 PF12833 Helix-turn-helix domain AT984_RS00550 PF00672 HAMP domain AT984_RS00550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS00550 PF02203 Tar ligand binding domain homologue AT984_RS00560 PF12228 Protein of unknown function (DUF3604) AT984_RS00575 PF03466 LysR substrate binding domain AT984_RS00575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS00585 PF00072 Response regulator receiver domain AT984_RS00590 PF07237 Protein of unknown function (DUF1428) AT984_RS00605 PF00563 EAL domain AT984_RS00605 PF03707 Bacterial signalling protein N terminal repeat AT984_RS00605 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS00610 PF00294 pfkB family carbohydrate kinase AT984_RS00620 PF00487 Fatty acid desaturase AT984_RS00625 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AT984_RS00625 PF12833 Helix-turn-helix domain AT984_RS00640 PF02146 Sir2 family AT984_RS00650 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS00670 PF09423 PhoD-like phosphatase AT984_RS00670 PF16655 PhoD-like phosphatase, N-terminal domain AT984_RS00675 PF00155 Aminotransferase class I and II AT984_RS00675 PF00392 Bacterial regulatory proteins, gntR family AT984_RS00680 PF00202 Aminotransferase class-III AT984_RS00685 PF00171 Aldehyde dehydrogenase family AT984_RS00695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AT984_RS00695 PF02896 PEP-utilising enzyme, TIM barrel domain AT984_RS00695 PF00391 PEP-utilising enzyme, mobile domain AT984_RS00700 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AT984_RS00700 PF00561 alpha/beta hydrolase fold AT984_RS00710 PF01575 MaoC like domain AT984_RS00715 PF02203 Tar ligand binding domain homologue AT984_RS00715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS00715 PF00672 HAMP domain AT984_RS00740 PF00155 Aminotransferase class I and II AT984_RS00740 PF00392 Bacterial regulatory proteins, gntR family AT984_RS00765 PF07732 Multicopper oxidase AT984_RS00765 PF07731 Multicopper oxidase AT984_RS00790 PF01569 PAP2 superfamily AT984_RS00795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS00795 PF08447 PAS fold AT984_RS00800 PF01545 Cation efflux family AT984_RS00850 PF07687 Peptidase dimerisation domain AT984_RS00850 PF01546 Peptidase family M20/M25/M40 AT984_RS00855 PF01546 Peptidase family M20/M25/M40 AT984_RS00855 PF07687 Peptidase dimerisation domain AT984_RS00865 PF00576 HIUase/Transthyretin family AT984_RS00895 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AT984_RS00895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AT984_RS00900 PF00111 2Fe-2S iron-sulfur cluster binding domain AT984_RS00900 PF01799 [2Fe-2S] binding domain AT984_RS00905 PF01979 Amidohydrolase family AT984_RS00910 PF00005 ABC transporter AT984_RS00915 PF02653 Branched-chain amino acid transport system / permease component AT984_RS00925 PF02608 ABC transporter substrate-binding protein PnrA-like AT984_RS00935 PF08245 Mur ligase middle domain AT984_RS00935 PF02875 Mur ligase family, glutamate ligase domain AT984_RS00935 PF08443 RimK-like ATP-grasp domain AT984_RS00940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AT984_RS00940 PF02875 Mur ligase family, glutamate ligase domain AT984_RS00940 PF08245 Mur ligase middle domain AT984_RS00945 PF00005 ABC transporter AT984_RS00945 PF00664 ABC transporter transmembrane region AT984_RS00965 PF01027 Inhibitor of apoptosis-promoting Bax1 AT984_RS00975 PF03466 LysR substrate binding domain AT984_RS00975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS00980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS00980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS00980 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS00985 PF00291 Pyridoxal-phosphate dependent enzyme AT984_RS00990 PF00484 Carbonic anhydrase AT984_RS00995 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AT984_RS01000 PF00108 Thiolase, N-terminal domain AT984_RS01000 PF02803 Thiolase, C-terminal domain AT984_RS01020 PF00485 Phosphoribulokinase / Uridine kinase family AT984_RS01060 PF01740 STAS domain AT984_RS01065 PF13581 Histidine kinase-like ATPase domain AT984_RS01080 PF00211 Adenylate and Guanylate cyclase catalytic domain AT984_RS01080 PF13191 AAA ATPase domain AT984_RS01085 PF00106 short chain dehydrogenase AT984_RS01100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS01100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS01100 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS01105 PF00440 Bacterial regulatory proteins, tetR family AT984_RS01110 PF08447 PAS fold AT984_RS01110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS01115 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS01115 PF03707 Bacterial signalling protein N terminal repeat AT984_RS01115 PF00563 EAL domain AT984_RS01120 PF01323 DSBA-like thioredoxin domain AT984_RS01130 PF13193 AMP-binding enzyme C-terminal domain AT984_RS01130 PF00501 AMP-binding enzyme AT984_RS01135 PF02954 Bacterial regulatory protein, Fis family AT984_RS01135 PF00072 Response regulator receiver domain AT984_RS01135 PF00158 Sigma-54 interaction domain AT984_RS01140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS01140 PF00672 HAMP domain AT984_RS01140 PF17200 Single Cache domain 2 AT984_RS01150 PF00005 ABC transporter AT984_RS01150 PF12399 Branched-chain amino acid ATP-binding cassette transporter AT984_RS01155 PF00005 ABC transporter AT984_RS01160 PF02653 Branched-chain amino acid transport system / permease component AT984_RS01160 PF11862 Domain of unknown function (DUF3382) AT984_RS01170 PF10605 3HB-oligomer hydrolase (3HBOH) AT984_RS01180 PF00072 Response regulator receiver domain AT984_RS01180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS01180 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS01180 PF00672 HAMP domain AT984_RS01180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AT984_RS01180 PF01627 Hpt domain AT984_RS01185 PF00005 ABC transporter AT984_RS01185 PF17755 UvrA DNA-binding domain AT984_RS01185 PF17760 UvrA interaction domain AT984_RS01195 PF11339 Protein of unknown function (DUF3141) AT984_RS01200 PF01515 Phosphate acetyl/butaryl transferase AT984_RS01205 PF00871 Acetokinase family AT984_RS01215 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AT984_RS01215 PF00326 Prolyl oligopeptidase family AT984_RS01240 PF05661 Protein of unknown function (DUF808) AT984_RS01265 PF12804 MobA-like NTP transferase domain AT984_RS01265 PF00132 Bacterial transferase hexapeptide (six repeats) AT984_RS01275 PF01171 PP-loop family AT984_RS01290 PF01794 Ferric reductase like transmembrane component AT984_RS01295 PF00174 Oxidoreductase molybdopterin binding domain AT984_RS01300 PF01578 Cytochrome C assembly protein AT984_RS01305 PF05140 ResB-like family AT984_RS01310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AT984_RS01315 PF01926 50S ribosome-binding GTPase AT984_RS01320 PF01734 Patatin-like phospholipase AT984_RS01330 PF00118 TCP-1/cpn60 chaperonin family AT984_RS01335 PF00166 Chaperonin 10 Kd subunit AT984_RS01340 PF07690 Major Facilitator Superfamily AT984_RS01340 PF00083 Sugar (and other) transporter AT984_RS01345 PF06481 COX Aromatic Rich Motif AT984_RS01345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AT984_RS01350 PF00115 Cytochrome C and Quinol oxidase polypeptide I AT984_RS01355 PF00510 Cytochrome c oxidase subunit III AT984_RS01360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AT984_RS01365 PF02104 SURF1 family AT984_RS01370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS01370 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS01375 PF00072 Response regulator receiver domain AT984_RS01385 PF01471 Putative peptidoglycan binding domain AT984_RS01385 PF13401 AAA domain AT984_RS01395 PF01810 LysE type translocator AT984_RS01400 PF02666 Phosphatidylserine decarboxylase AT984_RS01405 PF00668 Condensation domain AT984_RS01405 PF00202 Aminotransferase class-III AT984_RS01405 PF00550 Phosphopantetheine attachment site AT984_RS01405 PF02801 Beta-ketoacyl synthase, C-terminal domain AT984_RS01405 PF00501 AMP-binding enzyme AT984_RS01405 PF00109 Beta-ketoacyl synthase, N-terminal domain AT984_RS01405 PF16197 Ketoacyl-synthetase C-terminal extension AT984_RS01405 PF13193 AMP-binding enzyme C-terminal domain AT984_RS01415 PF13439 Glycosyltransferase Family 4 AT984_RS01415 PF00534 Glycosyl transferases group 1 AT984_RS01430 PF07687 Peptidase dimerisation domain AT984_RS01430 PF01546 Peptidase family M20/M25/M40 AT984_RS01440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AT984_RS01440 PF00384 Molybdopterin oxidoreductase AT984_RS01440 PF01568 Molydopterin dinucleotide binding domain AT984_RS01480 PF00005 ABC transporter AT984_RS01485 PF01061 ABC-2 type transporter AT984_RS01500 PF01634 ATP phosphoribosyltransferase AT984_RS01505 PF00815 Histidinol dehydrogenase AT984_RS01525 PF00155 Aminotransferase class I and II AT984_RS01530 PF00475 Imidazoleglycerol-phosphate dehydratase AT984_RS01535 PF00117 Glutamine amidotransferase class-I AT984_RS01540 PF00977 Histidine biosynthesis protein AT984_RS01545 PF00977 Histidine biosynthesis protein AT984_RS01555 PF01467 Cytidylyltransferase-like AT984_RS01560 PF00037 4Fe-4S binding domain AT984_RS01570 PF02654 Cobalamin-5-phosphate synthase AT984_RS01575 PF02277 Phosphoribosyltransferase AT984_RS01580 PF01497 Periplasmic binding protein AT984_RS01585 PF07685 CobB/CobQ-like glutamine amidotransferase domain AT984_RS01585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AT984_RS01590 PF00155 Aminotransferase class I and II AT984_RS01595 PF03186 CobD/Cbib protein AT984_RS01600 PF12557 Cob(I)alamin adenosyltransferase N terminal AT984_RS01600 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AT984_RS01605 PF07685 CobB/CobQ-like glutamine amidotransferase domain AT984_RS01605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AT984_RS01610 PF00005 ABC transporter AT984_RS01615 PF01032 FecCD transport family AT984_RS01625 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AT984_RS01630 PF00593 TonB dependent receptor AT984_RS01630 PF07715 TonB-dependent Receptor Plug Domain AT984_RS01640 PF01195 Peptidyl-tRNA hydrolase AT984_RS01650 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS01655 PF14693 Ribosomal protein TL5, C-terminal domain AT984_RS01655 PF01386 Ribosomal L25p family AT984_RS01660 PF14572 Phosphoribosyl synthetase-associated domain AT984_RS01660 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AT984_RS01670 PF00288 GHMP kinases N terminal domain AT984_RS01685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AT984_RS01685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AT984_RS01685 PF06827 Zinc finger found in FPG and IleRS AT984_RS01690 PF10576 Iron-sulfur binding domain of endonuclease III AT984_RS01690 PF00633 Helix-hairpin-helix motif AT984_RS01690 PF14815 NUDIX domain AT984_RS01690 PF00730 HhH-GPD superfamily base excision DNA repair protein AT984_RS01700 PF03668 P-loop ATPase protein family AT984_RS01705 PF02463 RecF/RecN/SMC N terminal domain AT984_RS01710 PF01513 ATP-NAD kinase AT984_RS01715 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AT984_RS01715 PF01628 HrcA protein C terminal domain AT984_RS01735 PF13417 Glutathione S-transferase, N-terminal domain AT984_RS01735 PF00043 Glutathione S-transferase, C-terminal domain AT984_RS01750 PF05728 Uncharacterised protein family (UPF0227) AT984_RS01770 PF01225 Mur ligase family, catalytic domain AT984_RS01770 PF02875 Mur ligase family, glutamate ligase domain AT984_RS01770 PF08245 Mur ligase middle domain AT984_RS01775 PF13419 Haloacid dehalogenase-like hydrolase AT984_RS01780 PF00202 Aminotransferase class-III AT984_RS01790 PF00301 Rubredoxin AT984_RS01795 PF00072 Response regulator receiver domain AT984_RS01800 PF00072 Response regulator receiver domain AT984_RS01810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS01810 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AT984_RS01815 PF02895 Signal transducing histidine kinase, homodimeric domain AT984_RS01815 PF01584 CheW-like domain AT984_RS01815 PF01627 Hpt domain AT984_RS01815 PF07194 P2 response regulator binding domain AT984_RS01815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS01820 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS01830 PF03441 FAD binding domain of DNA photolyase AT984_RS01830 PF00875 DNA photolyase AT984_RS01835 PF02622 Uncharacterized ACR, COG1678 AT984_RS01840 PF03652 Holliday junction resolvase AT984_RS01845 PF00156 Phosphoribosyl transferase domain AT984_RS01850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AT984_RS01850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AT984_RS01855 PF01979 Amidohydrolase family AT984_RS01860 PF01553 Acyltransferase AT984_RS01865 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AT984_RS01865 PF14572 Phosphoribosyl synthetase-associated domain AT984_RS01870 PF00300 Histidine phosphatase superfamily (branch 1) AT984_RS01885 PF00672 HAMP domain AT984_RS01885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS01885 PF02203 Tar ligand binding domain homologue AT984_RS01890 PF00581 Rhodanese-like domain AT984_RS01895 PF00462 Glutaredoxin AT984_RS01900 PF02556 Preprotein translocase subunit SecB AT984_RS01905 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AT984_RS01905 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AT984_RS01910 PF03401 Tripartite tricarboxylate transporter family receptor AT984_RS01915 PF00588 SpoU rRNA Methylase family AT984_RS01920 PF00156 Phosphoribosyl transferase domain AT984_RS01925 PF08241 Methyltransferase domain AT984_RS01930 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AT984_RS01930 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AT984_RS01935 PF00115 Cytochrome C and Quinol oxidase polypeptide I AT984_RS01940 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AT984_RS01950 PF00510 Cytochrome c oxidase subunit III AT984_RS01970 PF02628 Cytochrome oxidase assembly protein AT984_RS01975 PF01040 UbiA prenyltransferase family AT984_RS01980 PF02630 SCO1/SenC AT984_RS01985 PF04545 Sigma-70, region 4 AT984_RS01985 PF04542 Sigma-70 region 2 AT984_RS01985 PF00140 Sigma-70 factor, region 1.2 AT984_RS01990 PF01584 CheW-like domain AT984_RS01995 PF08212 Lipocalin-like domain AT984_RS02000 PF01370 NAD dependent epimerase/dehydratase family AT984_RS02000 PF08338 Domain of unknown function (DUF1731) AT984_RS02005 PF06071 Protein of unknown function (DUF933) AT984_RS02005 PF01926 50S ribosome-binding GTPase AT984_RS02010 PF01494 FAD binding domain AT984_RS02015 PF13098 Thioredoxin-like domain AT984_RS02015 PF10411 Disulfide bond isomerase protein N-terminus AT984_RS02035 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS02040 PF00152 tRNA synthetases class II (D, K and N) AT984_RS02040 PF01336 OB-fold nucleic acid binding domain AT984_RS02050 PF00132 Bacterial transferase hexapeptide (six repeats) AT984_RS02055 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AT984_RS02085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AT984_RS02090 PF02397 Bacterial sugar transferase AT984_RS02095 PF02719 Polysaccharide biosynthesis protein AT984_RS02100 PF16363 GDP-mannose 4,6 dehydratase AT984_RS02105 PF04321 RmlD substrate binding domain AT984_RS02110 PF00483 Nucleotidyl transferase AT984_RS02115 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AT984_RS02120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AT984_RS02120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AT984_RS02120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AT984_RS02125 PF02350 UDP-N-acetylglucosamine 2-epimerase AT984_RS02130 PF13439 Glycosyltransferase Family 4 AT984_RS02130 PF00534 Glycosyl transferases group 1 AT984_RS02140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AT984_RS02140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AT984_RS02145 PF00977 Histidine biosynthesis protein AT984_RS02150 PF00117 Glutamine amidotransferase class-I AT984_RS02165 PF00535 Glycosyl transferase family 2 AT984_RS02180 PF16363 GDP-mannose 4,6 dehydratase AT984_RS02185 PF06426 Serine acetyltransferase, N-terminal AT984_RS02185 PF00132 Bacterial transferase hexapeptide (six repeats) AT984_RS02200 PF16363 GDP-mannose 4,6 dehydratase AT984_RS02205 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AT984_RS02210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AT984_RS02215 PF16363 GDP-mannose 4,6 dehydratase AT984_RS02220 PF00483 Nucleotidyl transferase AT984_RS02230 PF16363 GDP-mannose 4,6 dehydratase AT984_RS02235 PF01370 NAD dependent epimerase/dehydratase family AT984_RS02255 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AT984_RS02255 PF00953 Glycosyl transferase family 4 AT984_RS02260 PF00270 DEAD/DEAH box helicase AT984_RS02260 PF00271 Helicase conserved C-terminal domain AT984_RS02265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AT984_RS02270 PF02545 Maf-like protein AT984_RS02275 PF02620 Large ribosomal RNA subunit accumulation protein YceD AT984_RS02280 PF01783 Ribosomal L32p protein family AT984_RS02285 PF02504 Fatty acid synthesis protein AT984_RS02290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AT984_RS02290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AT984_RS02295 PF00698 Acyl transferase domain AT984_RS02305 PF00550 Phosphopantetheine attachment site AT984_RS02310 PF02801 Beta-ketoacyl synthase, C-terminal domain AT984_RS02310 PF00109 Beta-ketoacyl synthase, N-terminal domain AT984_RS02320 PF13180 PDZ domain AT984_RS02325 PF00679 Elongation factor G C-terminus AT984_RS02325 PF06421 GTP-binding protein LepA C-terminus AT984_RS02325 PF03144 Elongation factor Tu domain 2 AT984_RS02325 PF00009 Elongation factor Tu GTP binding domain AT984_RS02330 PF10502 Signal peptidase, peptidase S26 AT984_RS02340 PF14622 Ribonuclease-III-like AT984_RS02340 PF00035 Double-stranded RNA binding motif AT984_RS02345 PF01926 50S ribosome-binding GTPase AT984_RS02345 PF07650 KH domain AT984_RS02350 PF11967 Recombination protein O N terminal AT984_RS02350 PF02565 Recombination protein O C terminal AT984_RS02355 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AT984_RS02365 PF01648 4'-phosphopantetheinyl transferase superfamily AT984_RS02370 PF00933 Glycosyl hydrolase family 3 N terminal domain AT984_RS02375 PF00854 POT family AT984_RS02380 PF12111 Polyribonucleotide phosphorylase C terminal AT984_RS02380 PF10150 Ribonuclease E/G family AT984_RS02380 PF00575 S1 RNA binding domain AT984_RS02385 PF00849 RNA pseudouridylate synthase AT984_RS02385 PF01479 S4 domain AT984_RS02390 PF13419 Haloacid dehalogenase-like hydrolase AT984_RS02400 PF01343 Peptidase family S49 AT984_RS02400 PF06965 Na+/H+ antiporter 1 AT984_RS02405 PF03814 Potassium-transporting ATPase A subunit AT984_RS02415 PF02669 K+-transporting ATPase, c chain AT984_RS02425 PF01544 CorA-like Mg2+ transporter protein AT984_RS02430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS02430 PF02702 Osmosensitive K+ channel His kinase sensor domain AT984_RS02430 PF13492 GAF domain AT984_RS02430 PF13493 Domain of unknown function (DUF4118) AT984_RS02430 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS02435 PF00072 Response regulator receiver domain AT984_RS02435 PF00486 Transcriptional regulatory protein, C terminal AT984_RS02445 PF00117 Glutamine amidotransferase class-I AT984_RS02445 PF00958 GMP synthase C terminal domain AT984_RS02445 PF02540 NAD synthase AT984_RS02450 PF01960 ArgJ family AT984_RS02460 PF00072 Response regulator receiver domain AT984_RS02470 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AT984_RS02470 PF18416 N-acetylglucosamine binding protein domain 2 AT984_RS02480 PF00107 Zinc-binding dehydrogenase AT984_RS02480 PF08240 Alcohol dehydrogenase GroES-like domain AT984_RS02485 PF00593 TonB dependent receptor AT984_RS02485 PF07715 TonB-dependent Receptor Plug Domain AT984_RS02490 PF00082 Subtilase family AT984_RS02490 PF01483 Proprotein convertase P-domain AT984_RS02495 PF00196 Bacterial regulatory proteins, luxR family AT984_RS02495 PF03472 Autoinducer binding domain AT984_RS02525 PF01618 MotA/TolQ/ExbB proton channel family AT984_RS02530 PF02472 Biopolymer transport protein ExbD/TolR AT984_RS02535 PF02472 Biopolymer transport protein ExbD/TolR AT984_RS02570 PF03009 Glycerophosphoryl diester phosphodiesterase family AT984_RS02575 PF00005 ABC transporter AT984_RS02575 PF17912 MalK OB fold domain AT984_RS02580 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS02585 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS02590 PF13416 Bacterial extracellular solute-binding protein AT984_RS02600 PF03401 Tripartite tricarboxylate transporter family receptor AT984_RS02610 PF02423 Ornithine cyclodeaminase/mu-crystallin family AT984_RS02615 PF01037 Lrp/AsnC ligand binding domain AT984_RS02630 PF00005 ABC transporter AT984_RS02635 PF02405 Permease MlaE AT984_RS02645 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AT984_RS02645 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AT984_RS02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS02655 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS02655 PF00672 HAMP domain AT984_RS02655 PF01627 Hpt domain AT984_RS02655 PF00072 Response regulator receiver domain AT984_RS02655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AT984_RS02660 PF01804 Penicillin amidase AT984_RS02685 PF01734 Patatin-like phospholipase AT984_RS02700 PF09361 Phasin protein AT984_RS02710 PF01527 Transposase AT984_RS02715 PF13276 HTH-like domain AT984_RS02715 PF00665 Integrase core domain AT984_RS02715 PF13333 Integrase core domain AT984_RS02720 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS02720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS02735 PF00326 Prolyl oligopeptidase family AT984_RS02740 PF00850 Histone deacetylase domain AT984_RS02750 PF00881 Nitroreductase family AT984_RS02755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AT984_RS02755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AT984_RS02760 PF02646 RmuC family AT984_RS02770 PF05736 OprF membrane domain AT984_RS02770 PF00691 OmpA family AT984_RS02825 PF00665 Integrase core domain AT984_RS02830 PF01695 IstB-like ATP binding protein AT984_RS02860 PF02653 Branched-chain amino acid transport system / permease component AT984_RS02865 PF00005 ABC transporter AT984_RS02865 PF12399 Branched-chain amino acid ATP-binding cassette transporter AT984_RS02870 PF00005 ABC transporter AT984_RS02875 PF04116 Fatty acid hydroxylase superfamily AT984_RS02895 PF00486 Transcriptional regulatory protein, C terminal AT984_RS02895 PF00072 Response regulator receiver domain AT984_RS02900 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS02900 PF00672 HAMP domain AT984_RS02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS02905 PF01432 Peptidase family M3 AT984_RS02910 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AT984_RS02910 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AT984_RS02915 PF00196 Bacterial regulatory proteins, luxR family AT984_RS02915 PF00072 Response regulator receiver domain AT984_RS02920 PF00989 PAS fold AT984_RS02920 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS02920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS02925 PF17831 Pyruvate dehydrogenase E1 component middle domain AT984_RS02925 PF00456 Transketolase, thiamine diphosphate binding domain AT984_RS02930 PF00364 Biotin-requiring enzyme AT984_RS02930 PF02817 e3 binding domain AT984_RS02930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AT984_RS02935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AT984_RS02935 PF07992 Pyridine nucleotide-disulphide oxidoreductase AT984_RS02945 PF07504 Fungalysin/Thermolysin Propeptide Motif AT984_RS02945 PF01483 Proprotein convertase P-domain AT984_RS02945 PF02868 Thermolysin metallopeptidase, alpha-helical domain AT984_RS02945 PF01447 Thermolysin metallopeptidase, catalytic domain AT984_RS02975 PF00854 POT family AT984_RS02985 PF01209 ubiE/COQ5 methyltransferase family AT984_RS02990 PF00753 Metallo-beta-lactamase superfamily AT984_RS02995 PF03951 Glutamine synthetase, beta-Grasp domain AT984_RS02995 PF00120 Glutamine synthetase, catalytic domain AT984_RS03015 PF00293 NUDIX domain AT984_RS03015 PF09297 NADH pyrophosphatase zinc ribbon domain AT984_RS03020 PF14497 Glutathione S-transferase, C-terminal domain AT984_RS03020 PF02798 Glutathione S-transferase, N-terminal domain AT984_RS03025 PF02578 Multi-copper polyphenol oxidoreductase laccase AT984_RS03035 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AT984_RS03040 PF02803 Thiolase, C-terminal domain AT984_RS03040 PF00108 Thiolase, N-terminal domain AT984_RS03045 PF00106 short chain dehydrogenase AT984_RS03050 PF08448 PAS fold AT984_RS03050 PF08447 PAS fold AT984_RS03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS03055 PF01614 Bacterial transcriptional regulator AT984_RS03055 PF09339 IclR helix-turn-helix domain AT984_RS03090 PF03951 Glutamine synthetase, beta-Grasp domain AT984_RS03090 PF00120 Glutamine synthetase, catalytic domain AT984_RS03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS03100 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS03100 PF00989 PAS fold AT984_RS03105 PF00158 Sigma-54 interaction domain AT984_RS03105 PF00072 Response regulator receiver domain AT984_RS03105 PF02954 Bacterial regulatory protein, Fis family AT984_RS03120 PF00860 Permease family AT984_RS03130 PF01327 Polypeptide deformylase AT984_RS03140 PF13472 GDSL-like Lipase/Acylhydrolase family AT984_RS03145 PF00005 ABC transporter AT984_RS03165 PF04279 Intracellular septation protein A AT984_RS03170 PF01641 SelR domain AT984_RS03175 PF00501 AMP-binding enzyme AT984_RS03175 PF13193 AMP-binding enzyme C-terminal domain AT984_RS03185 PF02653 Branched-chain amino acid transport system / permease component AT984_RS03195 PF00005 ABC transporter AT984_RS03195 PF12399 Branched-chain amino acid ATP-binding cassette transporter AT984_RS03200 PF00005 ABC transporter AT984_RS03210 PF00005 ABC transporter AT984_RS03215 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS03220 PF13609 Gram-negative porin AT984_RS03225 PF00563 EAL domain AT984_RS03225 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS03225 PF03707 Bacterial signalling protein N terminal repeat AT984_RS03255 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AT984_RS03255 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AT984_RS03255 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS03260 PF02803 Thiolase, C-terminal domain AT984_RS03260 PF00108 Thiolase, N-terminal domain AT984_RS03265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS03265 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS03265 PF12806 Acetyl-CoA dehydrogenase C-terminal like AT984_RS03265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS03285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS03285 PF00672 HAMP domain AT984_RS03285 PF02203 Tar ligand binding domain homologue AT984_RS03290 PF00107 Zinc-binding dehydrogenase AT984_RS03290 PF16884 N-terminal domain of oxidoreductase AT984_RS03295 PF13673 Acetyltransferase (GNAT) domain AT984_RS03300 PF00106 short chain dehydrogenase AT984_RS03305 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AT984_RS03305 PF07992 Pyridine nucleotide-disulphide oxidoreductase AT984_RS03310 PF17876 Cold shock domain AT984_RS03310 PF08206 Ribonuclease B OB domain AT984_RS03310 PF00575 S1 RNA binding domain AT984_RS03310 PF00773 RNB domain AT984_RS03315 PF00575 S1 RNA binding domain AT984_RS03315 PF16921 Tex protein YqgF-like domain AT984_RS03315 PF09371 Tex-like protein N-terminal domain AT984_RS03315 PF17674 HHH domain AT984_RS03320 PF00593 TonB dependent receptor AT984_RS03320 PF07715 TonB-dependent Receptor Plug Domain AT984_RS03335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AT984_RS03335 PF03129 Anticodon binding domain AT984_RS03335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AT984_RS03335 PF02824 TGS domain AT984_RS03340 PF00707 Translation initiation factor IF-3, C-terminal domain AT984_RS03340 PF05198 Translation initiation factor IF-3, N-terminal domain AT984_RS03345 PF01632 Ribosomal protein L35 AT984_RS03350 PF00453 Ribosomal protein L20 AT984_RS03355 PF01409 tRNA synthetases class II core domain (F) AT984_RS03355 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AT984_RS03360 PF01588 Putative tRNA binding domain AT984_RS03360 PF03147 Ferredoxin-fold anticodon binding domain AT984_RS03360 PF03483 B3/4 domain AT984_RS03360 PF03484 tRNA synthetase B5 domain AT984_RS03360 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AT984_RS03365 PF00216 Bacterial DNA-binding protein AT984_RS03400 PF02321 Outer membrane efflux protein AT984_RS03405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS03410 PF12704 MacB-like periplasmic core domain AT984_RS03410 PF00005 ABC transporter AT984_RS03410 PF02687 FtsX-like permease family AT984_RS03415 PF12704 MacB-like periplasmic core domain AT984_RS03415 PF00005 ABC transporter AT984_RS03415 PF02687 FtsX-like permease family AT984_RS03455 PF00072 Response regulator receiver domain AT984_RS03455 PF00196 Bacterial regulatory proteins, luxR family AT984_RS03460 PF00672 HAMP domain AT984_RS03460 PF07730 Histidine kinase AT984_RS03460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS03480 PF13091 PLD-like domain AT984_RS03480 PF13396 Phospholipase_D-nuclease N-terminal AT984_RS03485 PF07995 Glucose / Sorbosone dehydrogenase AT984_RS03495 PF00005 ABC transporter AT984_RS03495 PF06472 ABC transporter transmembrane region 2 AT984_RS03520 PF00206 Lyase AT984_RS03520 PF10415 Fumarase C C-terminus AT984_RS03525 PF13545 Crp-like helix-turn-helix domain AT984_RS03525 PF00027 Cyclic nucleotide-binding domain AT984_RS03530 PF03631 Virulence factor BrkB AT984_RS03545 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS03545 PF00563 EAL domain AT984_RS03545 PF03707 Bacterial signalling protein N terminal repeat AT984_RS03550 PF06745 KaiC AT984_RS03580 PF02405 Permease MlaE AT984_RS03585 PF09383 NIL domain AT984_RS03585 PF00005 ABC transporter AT984_RS03600 PF00696 Amino acid kinase family AT984_RS03605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AT984_RS03605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AT984_RS03615 PF13520 Amino acid permease AT984_RS03640 PF01556 DnaJ C terminal domain AT984_RS03640 PF00226 DnaJ domain AT984_RS03650 PF03358 NADPH-dependent FMN reductase AT984_RS03660 PF00691 OmpA family AT984_RS03660 PF05736 OprF membrane domain AT984_RS03670 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AT984_RS03670 PF06165 Glycosyltransferase family 36 AT984_RS03670 PF10091 Putative glucoamylase AT984_RS03685 PF05532 CsbD-like AT984_RS03695 PF00905 Penicillin binding protein transpeptidase domain AT984_RS03695 PF00912 Transglycosylase AT984_RS03700 PF01594 AI-2E family transporter AT984_RS03705 PF04073 Aminoacyl-tRNA editing domain AT984_RS03710 PF02660 Glycerol-3-phosphate acyltransferase AT984_RS03715 PF01042 Endoribonuclease L-PSP AT984_RS03730 PF01300 Telomere recombination AT984_RS03735 PF02811 PHP domain AT984_RS03775 PF17768 RecJ OB domain AT984_RS03775 PF02272 DHHA1 domain AT984_RS03775 PF01368 DHH family AT984_RS03790 PF13090 Polyphosphate kinase C-terminal domain 2 AT984_RS03790 PF13089 Polyphosphate kinase N-terminal domain AT984_RS03790 PF17941 Polyphosphate kinase C-terminal domain 1 AT984_RS03790 PF02503 Polyphosphate kinase middle domain AT984_RS03800 PF02541 Ppx/GppA phosphatase family AT984_RS03810 PF00582 Universal stress protein family AT984_RS03815 PF00581 Rhodanese-like domain AT984_RS03825 PF02609 Exonuclease VII small subunit AT984_RS03830 PF00348 Polyprenyl synthetase AT984_RS03835 PF02780 Transketolase, C-terminal domain AT984_RS03835 PF02779 Transketolase, pyrimidine binding domain AT984_RS03835 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AT984_RS03840 PF02649 Type I GTP cyclohydrolase folE2 AT984_RS03845 PF03466 LysR substrate binding domain AT984_RS03845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS03850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AT984_RS03850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AT984_RS03855 PF10417 C-terminal domain of 1-Cys peroxiredoxin AT984_RS03855 PF00578 AhpC/TSA family AT984_RS03860 PF07992 Pyridine nucleotide-disulphide oxidoreductase AT984_RS03860 PF13192 Thioredoxin domain AT984_RS03865 PF00892 EamA-like transporter family AT984_RS03870 PF00849 RNA pseudouridylate synthase AT984_RS03885 PF00580 UvrD/REP helicase N-terminal domain AT984_RS03885 PF13361 UvrD-like helicase C-terminal domain AT984_RS03895 PF00360 Phytochrome region AT984_RS03895 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS03895 PF01590 GAF domain AT984_RS03895 PF00563 EAL domain AT984_RS03920 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AT984_RS03920 PF12833 Helix-turn-helix domain AT984_RS03925 PF01565 FAD binding domain AT984_RS03925 PF02913 FAD linked oxidases, C-terminal domain AT984_RS03930 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AT984_RS03930 PF01266 FAD dependent oxidoreductase AT984_RS03935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AT984_RS03935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AT984_RS03940 PF17785 PUA-like domain AT984_RS03940 PF10672 S-adenosylmethionine-dependent methyltransferase AT984_RS03955 PF01636 Phosphotransferase enzyme family AT984_RS03965 PF01612 3'-5' exonuclease AT984_RS03965 PF00476 DNA polymerase family A AT984_RS03965 PF01367 5'-3' exonuclease, C-terminal SAM fold AT984_RS03965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AT984_RS03975 PF12704 MacB-like periplasmic core domain AT984_RS03975 PF02687 FtsX-like permease family AT984_RS03980 PF00005 ABC transporter AT984_RS03985 PF00551 Formyl transferase AT984_RS03990 PF01026 TatD related DNase AT984_RS04005 PF00437 Type II/IV secretion system protein AT984_RS04015 PF01970 Tripartite tricarboxylate transporter TctA family AT984_RS04080 PF03030 Inorganic H+ pyrophosphatase AT984_RS04085 PF00719 Inorganic pyrophosphatase AT984_RS04095 PF02540 NAD synthase AT984_RS04095 PF00795 Carbon-nitrogen hydrolase AT984_RS04100 PF00543 Nitrogen regulatory protein P-II AT984_RS04125 PF00205 Thiamine pyrophosphate enzyme, central domain AT984_RS04125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AT984_RS04125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AT984_RS04130 PF10369 Small subunit of acetolactate synthase AT984_RS04135 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AT984_RS04135 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AT984_RS04140 PF01066 CDP-alcohol phosphatidyltransferase AT984_RS04145 PF08502 LeuA allosteric (dimerisation) domain AT984_RS04145 PF00682 HMGL-like AT984_RS04150 PF08502 LeuA allosteric (dimerisation) domain AT984_RS04150 PF00682 HMGL-like AT984_RS04155 PF00768 D-alanyl-D-alanine carboxypeptidase AT984_RS04160 PF09339 IclR helix-turn-helix domain AT984_RS04160 PF01614 Bacterial transcriptional regulator AT984_RS04170 PF01593 Flavin containing amine oxidoreductase AT984_RS04190 PF00873 AcrB/AcrD/AcrF family AT984_RS04200 PF05698 Bacterial trigger factor protein (TF) C-terminus AT984_RS04200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AT984_RS04200 PF05697 Bacterial trigger factor protein (TF) AT984_RS04205 PF00574 Clp protease AT984_RS04210 PF10431 C-terminal, D2-small domain, of ClpB protein AT984_RS04210 PF07724 AAA domain (Cdc48 subfamily) AT984_RS04210 PF06689 ClpX C4-type zinc finger AT984_RS04215 PF05362 Lon protease (S16) C-terminal proteolytic domain AT984_RS04215 PF02190 ATP-dependent protease La (LON) substrate-binding domain AT984_RS04215 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS04260 PF01527 Transposase AT984_RS04265 PF13276 HTH-like domain AT984_RS04265 PF13683 Integrase core domain AT984_RS04270 PF00665 Integrase core domain AT984_RS04290 PF01609 Transposase DDE domain AT984_RS04290 PF05598 Transposase domain (DUF772) AT984_RS04295 PF01527 Transposase AT984_RS04310 PF00664 ABC transporter transmembrane region AT984_RS04310 PF00005 ABC transporter AT984_RS04310 PF03412 Peptidase C39 family AT984_RS04325 PF01695 IstB-like ATP binding protein AT984_RS04330 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AT984_RS04335 PF00665 Integrase core domain AT984_RS04335 PF13276 HTH-like domain AT984_RS04335 PF01527 Transposase AT984_RS04335 PF13333 Integrase core domain AT984_RS04340 PF00665 Integrase core domain AT984_RS04345 PF01695 IstB-like ATP binding protein AT984_RS04350 PF00665 Integrase core domain AT984_RS04350 PF13276 HTH-like domain AT984_RS04350 PF01527 Transposase AT984_RS04350 PF13333 Integrase core domain AT984_RS04380 PF01695 IstB-like ATP binding protein AT984_RS04390 PF01527 Transposase AT984_RS04400 PF01527 Transposase AT984_RS04405 PF13683 Integrase core domain AT984_RS04405 PF13276 HTH-like domain AT984_RS04415 PF01527 Transposase AT984_RS04430 PF01527 Transposase AT984_RS04440 PF01311 Bacterial export proteins, family 1 AT984_RS04445 PF01313 Bacterial export proteins, family 3 AT984_RS04450 PF00813 FliP family AT984_RS04460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AT984_RS04460 PF16973 Flagellar motor switch protein FliN N-terminal AT984_RS04465 PF02154 Flagellar motor switch protein FliM AT984_RS04465 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AT984_RS04485 PF18269 T3SS EscN ATPase C-terminal domain AT984_RS04485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AT984_RS04495 PF14841 FliG middle domain AT984_RS04495 PF01706 FliG C-terminal domain AT984_RS04495 PF14842 FliG N-terminal domain AT984_RS04500 PF01514 Secretory protein of YscJ/FliF family AT984_RS04500 PF08345 Flagellar M-ring protein C-terminal AT984_RS04505 PF02049 Flagellar hook-basal body complex protein FliE AT984_RS04520 PF07238 PilZ domain AT984_RS04520 PF07317 Flagellar regulator YcgR AT984_RS04530 PF02561 Flagellar protein FliS AT984_RS04535 PF02465 Flagellar hook-associated protein 2 N-terminus AT984_RS04535 PF07195 Flagellar hook-associated protein 2 C-terminus AT984_RS04540 PF00669 Bacterial flagellin N-terminal helical region AT984_RS04540 PF00700 Bacterial flagellin C-terminal helical region AT984_RS04545 PF00669 Bacterial flagellin N-terminal helical region AT984_RS04545 PF00700 Bacterial flagellin C-terminal helical region AT984_RS04550 PF00669 Bacterial flagellin N-terminal helical region AT984_RS04550 PF00700 Bacterial flagellin C-terminal helical region AT984_RS04565 PF05247 Flagellar transcriptional activator (FlhD) AT984_RS04570 PF05280 Flagellar transcriptional activator (FlhC) AT984_RS04585 PF05247 Flagellar transcriptional activator (FlhD) AT984_RS04590 PF05280 Flagellar transcriptional activator (FlhC) AT984_RS04595 PF00535 Glycosyl transferase family 2 AT984_RS04595 PF13181 Tetratricopeptide repeat AT984_RS04600 PF05247 Flagellar transcriptional activator (FlhD) AT984_RS04605 PF05280 Flagellar transcriptional activator (FlhC) AT984_RS04615 PF01618 MotA/TolQ/ExbB proton channel family AT984_RS04620 PF13677 Membrane MotB of proton-channel complex MotA/MotB AT984_RS04620 PF00691 OmpA family AT984_RS04625 PF00072 Response regulator receiver domain AT984_RS04630 PF04344 Chemotaxis phosphatase, CheZ AT984_RS04635 PF01312 FlhB HrpN YscU SpaS Family AT984_RS04640 PF00771 FHIPEP family AT984_RS04645 PF00448 SRP54-type protein, GTPase domain AT984_RS04655 PF04542 Sigma-70 region 2 AT984_RS04655 PF04539 Sigma-70 region 3 AT984_RS04655 PF04545 Sigma-70, region 4 AT984_RS04660 PF00672 HAMP domain AT984_RS04660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS04660 PF17200 Single Cache domain 2 AT984_RS04665 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS04670 PF03707 Bacterial signalling protein N terminal repeat AT984_RS04670 PF00563 EAL domain AT984_RS04670 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS04680 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS04680 PF08446 PAS fold AT984_RS04680 PF00360 Phytochrome region AT984_RS04680 PF01590 GAF domain AT984_RS04685 PF03861 ANTAR domain AT984_RS04685 PF00072 Response regulator receiver domain AT984_RS04690 PF07568 Histidine kinase AT984_RS04690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS04690 PF12282 Signal transduction histidine kinase AT984_RS04700 PF00669 Bacterial flagellin N-terminal helical region AT984_RS04705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AT984_RS04705 PF00460 Flagella basal body rod protein AT984_RS04710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AT984_RS04710 PF10135 Rod binding protein AT984_RS04715 PF02119 Flagellar P-ring protein AT984_RS04720 PF02107 Flagellar L-ring protein AT984_RS04725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AT984_RS04725 PF00460 Flagella basal body rod protein AT984_RS04730 PF00460 Flagella basal body rod protein AT984_RS04730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AT984_RS04735 PF00460 Flagella basal body rod protein AT984_RS04735 PF07559 Flagellar basal body protein FlaE AT984_RS04735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AT984_RS04745 PF00460 Flagella basal body rod protein AT984_RS04745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AT984_RS04750 PF00460 Flagella basal body rod protein AT984_RS04775 PF02254 TrkA-N domain AT984_RS04775 PF00999 Sodium/hydrogen exchanger family AT984_RS04780 PF02525 Flavodoxin-like fold AT984_RS04785 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AT984_RS04790 PF01575 MaoC like domain AT984_RS04795 PF00072 Response regulator receiver domain AT984_RS04795 PF00196 Bacterial regulatory proteins, luxR family AT984_RS04800 PF02616 Segregation and condensation protein ScpA AT984_RS04810 PF00916 Sulfate permease family AT984_RS04810 PF01740 STAS domain AT984_RS04815 PF09334 tRNA synthetases class I (M) AT984_RS04815 PF01588 Putative tRNA binding domain AT984_RS04825 PF03775 Septum formation inhibitor MinC, C-terminal domain AT984_RS04825 PF05209 Septum formation inhibitor MinC, N-terminal domain AT984_RS04830 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AT984_RS04835 PF03776 Septum formation topological specificity factor MinE AT984_RS04840 PF02028 BCCT, betaine/carnitine/choline family transporter AT984_RS04845 PF09905 DNA-binding protein VF530 AT984_RS04855 PF00196 Bacterial regulatory proteins, luxR family AT984_RS04865 PF01863 Protein of unknown function DUF45 AT984_RS04870 PF01207 Dihydrouridine synthase (Dus) AT984_RS04875 PF01253 Translation initiation factor SUI1 AT984_RS04880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AT984_RS04880 PF00072 Response regulator receiver domain AT984_RS04880 PF01627 Hpt domain AT984_RS04880 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS04880 PF00672 HAMP domain AT984_RS04885 PF00271 Helicase conserved C-terminal domain AT984_RS04885 PF03880 DbpA RNA binding domain AT984_RS04885 PF00270 DEAD/DEAH box helicase AT984_RS04895 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AT984_RS04895 PF00749 tRNA synthetases class I (E and Q), catalytic domain AT984_RS04905 PF04397 LytTr DNA-binding domain AT984_RS04905 PF00072 Response regulator receiver domain AT984_RS04910 PF06580 Histidine kinase AT984_RS04910 PF07694 5TMR of 5TMR-LYT AT984_RS04920 PF05872 Bacterial protein of unknown function (DUF853) AT984_RS04925 PF01709 Transcriptional regulator AT984_RS04930 PF02843 Phosphoribosylglycinamide synthetase, C domain AT984_RS04930 PF02844 Phosphoribosylglycinamide synthetase, N domain AT984_RS04930 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AT984_RS04940 PF01218 Coproporphyrinogen III oxidase AT984_RS04945 PF01467 Cytidylyltransferase-like AT984_RS04955 PF02590 Predicted SPOUT methyltransferase AT984_RS04960 PF02545 Maf-like protein AT984_RS04965 PF10150 Ribonuclease E/G family AT984_RS04965 PF00575 S1 RNA binding domain AT984_RS04970 PF07676 WD40-like Beta Propeller Repeat AT984_RS04970 PF04052 TolB amino-terminal domain AT984_RS04975 PF00691 OmpA family AT984_RS04985 PF00899 ThiF family AT984_RS05000 PF00581 Rhodanese-like domain AT984_RS05005 PF00586 AIR synthase related protein, N-terminal domain AT984_RS05005 PF02769 AIR synthase related protein, C-terminal domain AT984_RS05010 PF12169 DNA polymerase III subunits gamma and tau domain III AT984_RS05010 PF12170 DNA polymerase III tau subunit V interacting with alpha AT984_RS05010 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AT984_RS05015 PF02575 YbaB/EbfC DNA-binding family AT984_RS05020 PF02132 RecR protein AT984_RS05020 PF13662 Toprim domain AT984_RS05030 PF01476 LysM domain AT984_RS05030 PF01464 Transglycosylase SLT domain AT984_RS05035 PF16123 Hydroxyacylglutathione hydrolase C-terminus AT984_RS05035 PF00753 Metallo-beta-lactamase superfamily AT984_RS05045 PF00075 RNase H AT984_RS05050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS05055 PF00873 AcrB/AcrD/AcrF family AT984_RS05060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AT984_RS05065 PF00692 dUTPase AT984_RS05080 PF00672 HAMP domain AT984_RS05080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS05080 PF02203 Tar ligand binding domain homologue AT984_RS05085 PF01546 Peptidase family M20/M25/M40 AT984_RS05085 PF07687 Peptidase dimerisation domain AT984_RS05090 PF10459 Peptidase S46 AT984_RS05100 PF13302 Acetyltransferase (GNAT) domain AT984_RS05105 PF01070 FMN-dependent dehydrogenase AT984_RS05110 PF11799 impB/mucB/samB family C-terminal domain AT984_RS05110 PF00817 impB/mucB/samB family AT984_RS05115 PF00672 HAMP domain AT984_RS05115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS05115 PF02203 Tar ligand binding domain homologue AT984_RS05135 PF00072 Response regulator receiver domain AT984_RS05135 PF00486 Transcriptional regulatory protein, C terminal AT984_RS05145 PF00672 HAMP domain AT984_RS05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS05145 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS05150 PF00206 Lyase AT984_RS05150 PF14698 Argininosuccinate lyase C-terminal AT984_RS05155 PF07694 5TMR of 5TMR-LYT AT984_RS05155 PF06580 Histidine kinase AT984_RS05160 PF00072 Response regulator receiver domain AT984_RS05160 PF04397 LytTr DNA-binding domain AT984_RS05165 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS05170 PF00005 ABC transporter AT984_RS05180 PF00311 Phosphoenolpyruvate carboxylase AT984_RS05185 PF03900 Porphobilinogen deaminase, C-terminal domain AT984_RS05185 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AT984_RS05190 PF02602 Uroporphyrinogen-III synthase HemD AT984_RS05215 PF02515 CoA-transferase family III AT984_RS05220 PF01272 Transcription elongation factor, GreA/GreB, C-term AT984_RS05220 PF03449 Transcription elongation factor, N-terminal AT984_RS05225 PF13291 ACT domain AT984_RS05225 PF04607 Region found in RelA / SpoT proteins AT984_RS05225 PF02824 TGS domain AT984_RS05230 PF01192 RNA polymerase Rpb6 AT984_RS05235 PF00625 Guanylate kinase AT984_RS05240 PF01402 Ribbon-helix-helix protein, copG family AT984_RS05240 PF08753 NikR C terminal nickel binding domain AT984_RS05255 PF01464 Transglycosylase SLT domain AT984_RS05265 PF01144 Coenzyme A transferase AT984_RS05270 PF01144 Coenzyme A transferase AT984_RS05280 PF01494 FAD binding domain AT984_RS05285 PF02600 Disulfide bond formation protein DsbB AT984_RS05295 PF00753 Metallo-beta-lactamase superfamily AT984_RS05295 PF03772 Competence protein AT984_RS05300 PF13406 Transglycosylase SLT domain AT984_RS05305 PF01841 Transglutaminase-like superfamily AT984_RS05305 PF13559 Domain of unknown function (DUF4129) AT984_RS05305 PF11992 Domain of unknown function (DUF3488) AT984_RS05315 PF17863 AAA lid domain AT984_RS05315 PF07726 ATPase family associated with various cellular activities (AAA) AT984_RS05320 PF00850 Histone deacetylase domain AT984_RS05325 PF12794 Mechanosensitive ion channel inner membrane domain 1 AT984_RS05325 PF00924 Mechanosensitive ion channel AT984_RS05325 PF12795 Mechanosensitive ion channel porin domain AT984_RS05330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AT984_RS05335 PF01799 [2Fe-2S] binding domain AT984_RS05335 PF00111 2Fe-2S iron-sulfur cluster binding domain AT984_RS05355 PF01594 AI-2E family transporter AT984_RS05360 PF00042 Globin AT984_RS05360 PF00175 Oxidoreductase NAD-binding domain AT984_RS05360 PF00970 Oxidoreductase FAD-binding domain AT984_RS05395 PF00196 Bacterial regulatory proteins, luxR family AT984_RS05420 PF02333 Phytase AT984_RS05470 PF07694 5TMR of 5TMR-LYT AT984_RS05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS05470 PF06580 Histidine kinase AT984_RS05475 PF04397 LytTr DNA-binding domain AT984_RS05475 PF00072 Response regulator receiver domain AT984_RS05480 PF00672 HAMP domain AT984_RS05480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS05480 PF02743 Cache domain AT984_RS05485 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS05495 PF06965 Na+/H+ antiporter 1 AT984_RS05500 PF03350 Uncharacterized protein family, UPF0114 AT984_RS05505 PF13193 AMP-binding enzyme C-terminal domain AT984_RS05505 PF00501 AMP-binding enzyme AT984_RS05505 PF16177 Acetyl-coenzyme A synthetase N-terminus AT984_RS05510 PF00034 Cytochrome c AT984_RS05530 PF00586 AIR synthase related protein, N-terminal domain AT984_RS05530 PF02769 AIR synthase related protein, C-terminal domain AT984_RS05540 PF00005 ABC transporter AT984_RS05545 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS05570 PF04052 TolB amino-terminal domain AT984_RS05570 PF07676 WD40-like Beta Propeller Repeat AT984_RS05580 PF14579 Helix-hairpin-helix motif AT984_RS05580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AT984_RS05580 PF02811 PHP domain AT984_RS05580 PF01336 OB-fold nucleic acid binding domain AT984_RS05580 PF07733 Bacterial DNA polymerase III alpha NTPase domain AT984_RS05590 PF00005 ABC transporter AT984_RS05590 PF00664 ABC transporter transmembrane region AT984_RS05595 PF13439 Glycosyltransferase Family 4 AT984_RS05595 PF00534 Glycosyl transferases group 1 AT984_RS05600 PF00535 Glycosyl transferase family 2 AT984_RS05615 PF18073 Rubredoxin metal binding domain AT984_RS05625 PF00216 Bacterial DNA-binding protein AT984_RS05630 PF00575 S1 RNA binding domain AT984_RS05635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AT984_RS05640 PF02153 Prephenate dehydrogenase AT984_RS05645 PF01817 Chorismate mutase type II AT984_RS05645 PF01842 ACT domain AT984_RS05645 PF00800 Prephenate dehydratase AT984_RS05650 PF00266 Aminotransferase class-V AT984_RS05660 PF03989 DNA gyrase C-terminal domain, beta-propeller AT984_RS05660 PF00521 DNA gyrase/topoisomerase IV, subunit A AT984_RS05665 PF00691 OmpA family AT984_RS05675 PF13419 Haloacid dehalogenase-like hydrolase AT984_RS05690 PF02796 Helix-turn-helix domain of resolvase AT984_RS05690 PF00239 Resolvase, N terminal domain AT984_RS05780 PF01555 DNA methylase AT984_RS05785 PF02195 ParB-like nuclease domain AT984_RS05980 PF00271 Helicase conserved C-terminal domain AT984_RS05980 PF00176 SNF2 family N-terminal domain AT984_RS06090 PF02796 Helix-turn-helix domain of resolvase AT984_RS06090 PF00239 Resolvase, N terminal domain AT984_RS06120 PF01695 IstB-like ATP binding protein AT984_RS06125 PF00665 Integrase core domain AT984_RS06130 PF00271 Helicase conserved C-terminal domain AT984_RS06130 PF00176 SNF2 family N-terminal domain AT984_RS06135 PF12728 Helix-turn-helix domain AT984_RS06170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS06170 PF03466 LysR substrate binding domain AT984_RS06175 PF10417 C-terminal domain of 1-Cys peroxiredoxin AT984_RS06175 PF00578 AhpC/TSA family AT984_RS06205 PF04377 Arginine-tRNA-protein transferase, C terminus AT984_RS06205 PF04376 Arginine-tRNA-protein transferase, N terminus AT984_RS06210 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AT984_RS06215 PF03960 ArsC family AT984_RS06220 PF00909 Ammonium Transporter Family AT984_RS06225 PF00677 Lumazine binding domain AT984_RS06245 PF01434 Peptidase family M41 AT984_RS06245 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS06245 PF17862 AAA+ lid domain AT984_RS06320 PF00196 Bacterial regulatory proteins, luxR family AT984_RS06320 PF00072 Response regulator receiver domain AT984_RS06335 PF05088 Bacterial NAD-glutamate dehydrogenase AT984_RS06355 PF01709 Transcriptional regulator AT984_RS06365 PF01757 Acyltransferase family AT984_RS06370 PF00005 ABC transporter AT984_RS06370 PF03459 TOBE domain AT984_RS06370 PF17912 MalK OB fold domain AT984_RS06375 PF00722 Glycosyl hydrolases family 16 AT984_RS06380 PF00232 Glycosyl hydrolase family 1 AT984_RS06385 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS06420 PF04820 Tryptophan halogenase AT984_RS06425 PF02685 Glucokinase AT984_RS06430 PF02896 PEP-utilising enzyme, TIM barrel domain AT984_RS06430 PF00381 PTS HPr component phosphorylation site AT984_RS06430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AT984_RS06430 PF05524 PEP-utilising enzyme, N-terminal AT984_RS06430 PF00391 PEP-utilising enzyme, mobile domain AT984_RS06435 PF02378 Phosphotransferase system, EIIC AT984_RS06435 PF00367 phosphotransferase system, EIIB AT984_RS06440 PF01915 Glycosyl hydrolase family 3 C-terminal domain AT984_RS06440 PF00933 Glycosyl hydrolase family 3 N terminal domain AT984_RS06440 PF14310 Fibronectin type III-like domain AT984_RS06445 PF00920 Dehydratase family AT984_RS06450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS06450 PF03466 LysR substrate binding domain AT984_RS06460 PF01790 Prolipoprotein diacylglyceryl transferase AT984_RS06465 PF00929 Exonuclease AT984_RS06480 PF00135 Carboxylesterase family AT984_RS06500 PF00581 Rhodanese-like domain AT984_RS06505 PF01909 Nucleotidyltransferase domain AT984_RS06505 PF01966 HD domain AT984_RS06505 PF08335 GlnD PII-uridylyltransferase AT984_RS06510 PF00557 Metallopeptidase family M24 AT984_RS06515 PF02673 Bacitracin resistance protein BacA AT984_RS06520 PF00440 Bacterial regulatory proteins, tetR family AT984_RS06520 PF08362 YcdC-like protein, C-terminal region AT984_RS06525 PF13533 Biotin-lipoyl like AT984_RS06530 PF00873 AcrB/AcrD/AcrF family AT984_RS06540 PF00581 Rhodanese-like domain AT984_RS06545 PF02321 Outer membrane efflux protein AT984_RS06550 PF03883 Peroxide stress protein YaaA AT984_RS06565 PF01037 Lrp/AsnC ligand binding domain AT984_RS06565 PF13404 AsnC-type helix-turn-helix domain AT984_RS06570 PF00205 Thiamine pyrophosphate enzyme, central domain AT984_RS06570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AT984_RS06570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AT984_RS06580 PF01132 Elongation factor P (EF-P) OB domain AT984_RS06580 PF08207 Elongation factor P (EF-P) KOW-like domain AT984_RS06580 PF09285 Elongation factor P, C-terminal AT984_RS06590 PF08459 UvrC Helix-hairpin-helix N-terminal AT984_RS06590 PF01541 GIY-YIG catalytic domain AT984_RS06590 PF02151 UvrB/uvrC motif AT984_RS06600 PF01066 CDP-alcohol phosphatidyltransferase AT984_RS06605 PF00216 Bacterial DNA-binding protein AT984_RS06615 PF05698 Bacterial trigger factor protein (TF) C-terminus AT984_RS06625 PF00196 Bacterial regulatory proteins, luxR family AT984_RS06625 PF00072 Response regulator receiver domain AT984_RS06630 PF00550 Phosphopantetheine attachment site AT984_RS06630 PF14765 Polyketide synthase dehydratase AT984_RS06630 PF00109 Beta-ketoacyl synthase, N-terminal domain AT984_RS06630 PF16197 Ketoacyl-synthetase C-terminal extension AT984_RS06630 PF02801 Beta-ketoacyl synthase, C-terminal domain AT984_RS06630 PF00698 Acyl transferase domain AT984_RS06630 PF08240 Alcohol dehydrogenase GroES-like domain AT984_RS06630 PF08659 KR domain AT984_RS06635 PF01975 Survival protein SurE AT984_RS06645 PF01476 LysM domain AT984_RS06645 PF01551 Peptidase family M23 AT984_RS06650 PF00140 Sigma-70 factor, region 1.2 AT984_RS06650 PF04542 Sigma-70 region 2 AT984_RS06650 PF04539 Sigma-70 region 3 AT984_RS06650 PF04545 Sigma-70, region 4 AT984_RS06655 PF05958 tRNA (Uracil-5-)-methyltransferase AT984_RS06660 PF01027 Inhibitor of apoptosis-promoting Bax1 AT984_RS06665 PF03928 Haem-degrading AT984_RS06670 PF00117 Glutamine amidotransferase class-I AT984_RS06670 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AT984_RS06675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AT984_RS06675 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AT984_RS06675 PF02142 MGS-like domain AT984_RS06680 PF01272 Transcription elongation factor, GreA/GreB, C-term AT984_RS06680 PF03449 Transcription elongation factor, N-terminal AT984_RS06690 PF01985 CRS1 / YhbY (CRM) domain AT984_RS06695 PF01728 FtsJ-like methyltransferase AT984_RS06700 PF06480 FtsH Extracellular AT984_RS06700 PF01434 Peptidase family M41 AT984_RS06700 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS06700 PF17862 AAA+ lid domain AT984_RS06705 PF00809 Pterin binding enzyme AT984_RS06710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AT984_RS06710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AT984_RS06710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AT984_RS06710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AT984_RS06715 PF02469 Fasciclin domain AT984_RS06720 PF12849 PBP superfamily domain AT984_RS06725 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS06730 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS06735 PF00005 ABC transporter AT984_RS06740 PF01895 PhoU domain AT984_RS06745 PF00072 Response regulator receiver domain AT984_RS06745 PF00486 Transcriptional regulatory protein, C terminal AT984_RS06750 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS06750 PF11808 Phosphate regulon sensor protein PhoR AT984_RS06750 PF00989 PAS fold AT984_RS06760 PF01197 Ribosomal protein L31 AT984_RS06765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AT984_RS06765 PF07498 Rho termination factor, N-terminal domain AT984_RS06765 PF07497 Rho termination factor, RNA-binding domain AT984_RS06770 PF00085 Thioredoxin AT984_RS06790 PF02798 Glutathione S-transferase, N-terminal domain AT984_RS06790 PF00043 Glutathione S-transferase, C-terminal domain AT984_RS06805 PF00027 Cyclic nucleotide-binding domain AT984_RS06805 PF13545 Crp-like helix-turn-helix domain AT984_RS06815 PF00155 Aminotransferase class I and II AT984_RS06820 PF03466 LysR substrate binding domain AT984_RS06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS06840 PF02789 Cytosol aminopeptidase family, N-terminal domain AT984_RS06840 PF00883 Cytosol aminopeptidase family, catalytic domain AT984_RS06855 PF13458 Periplasmic binding protein AT984_RS06860 PF00534 Glycosyl transferases group 1 AT984_RS06860 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AT984_RS06865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AT984_RS06865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AT984_RS06865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AT984_RS06865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AT984_RS06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS06870 PF13492 GAF domain AT984_RS06870 PF06580 Histidine kinase AT984_RS06870 PF07694 5TMR of 5TMR-LYT AT984_RS06875 PF04397 LytTr DNA-binding domain AT984_RS06875 PF00072 Response regulator receiver domain AT984_RS06880 PF00730 HhH-GPD superfamily base excision DNA repair protein AT984_RS06880 PF06029 AlkA N-terminal domain AT984_RS06905 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS06910 PF00005 ABC transporter AT984_RS06915 PF12849 PBP superfamily domain AT984_RS06920 PF03958 Bacterial type II/III secretion system short domain AT984_RS06920 PF00263 Bacterial type II and III secretion system protein AT984_RS06975 PF00482 Type II secretion system (T2SS), protein F AT984_RS06980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AT984_RS06980 PF00437 Type II/IV secretion system protein AT984_RS06985 PF00437 Type II/IV secretion system protein AT984_RS06985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AT984_RS06995 PF08281 Sigma-70, region 4 AT984_RS06995 PF04542 Sigma-70 region 2 AT984_RS07005 PF05114 Protein of unknown function (DUF692) AT984_RS07025 PF02472 Biopolymer transport protein ExbD/TolR AT984_RS07030 PF01618 MotA/TolQ/ExbB proton channel family AT984_RS07035 PF03061 Thioesterase superfamily AT984_RS07040 PF00155 Aminotransferase class I and II AT984_RS07060 PF01527 Transposase AT984_RS07065 PF00665 Integrase core domain AT984_RS07065 PF13276 HTH-like domain AT984_RS07065 PF13333 Integrase core domain AT984_RS07075 PF13276 HTH-like domain AT984_RS07075 PF13683 Integrase core domain AT984_RS07080 PF01527 Transposase AT984_RS07095 PF01029 NusB family AT984_RS07100 PF00885 6,7-dimethyl-8-ribityllumazine synthase AT984_RS07105 PF00925 GTP cyclohydrolase II AT984_RS07105 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AT984_RS07110 PF01872 RibD C-terminal domain AT984_RS07110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AT984_RS07115 PF04381 Putative exonuclease, RdgC AT984_RS07135 PF00114 Pilin (bacterial filament) AT984_RS07135 PF07963 Prokaryotic N-terminal methylation motif AT984_RS07140 PF07963 Prokaryotic N-terminal methylation motif AT984_RS07140 PF00114 Pilin (bacterial filament) AT984_RS07150 PF03477 ATP cone domain AT984_RS07155 PF00464 Serine hydroxymethyltransferase AT984_RS07160 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AT984_RS07160 PF01464 Transglycosylase SLT domain AT984_RS07165 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AT984_RS07180 PF01625 Peptide methionine sulfoxide reductase AT984_RS07185 PF00005 ABC transporter AT984_RS07205 PF00593 TonB dependent receptor AT984_RS07205 PF07715 TonB-dependent Receptor Plug Domain AT984_RS07210 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AT984_RS07210 PF01243 Pyridoxamine 5'-phosphate oxidase AT984_RS07225 PF00497 Bacterial extracellular solute-binding proteins, family 3 AT984_RS07230 PF00072 Response regulator receiver domain AT984_RS07230 PF02954 Bacterial regulatory protein, Fis family AT984_RS07230 PF00158 Sigma-54 interaction domain AT984_RS07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS07235 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS07240 PF02653 Branched-chain amino acid transport system / permease component AT984_RS07245 PF11862 Domain of unknown function (DUF3382) AT984_RS07245 PF02653 Branched-chain amino acid transport system / permease component AT984_RS07250 PF00005 ABC transporter AT984_RS07250 PF12399 Branched-chain amino acid ATP-binding cassette transporter AT984_RS07255 PF00005 ABC transporter AT984_RS07265 PF12795 Mechanosensitive ion channel porin domain AT984_RS07265 PF12794 Mechanosensitive ion channel inner membrane domain 1 AT984_RS07265 PF00924 Mechanosensitive ion channel AT984_RS07270 PF00920 Dehydratase family AT984_RS07275 PF01081 KDPG and KHG aldolase AT984_RS07300 PF00892 EamA-like transporter family AT984_RS07325 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AT984_RS07325 PF00400 WD domain, G-beta repeat AT984_RS07330 PF00171 Aldehyde dehydrogenase family AT984_RS07340 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS07345 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS07350 PF00005 ABC transporter AT984_RS07350 PF08402 TOBE domain AT984_RS07355 PF13416 Bacterial extracellular solute-binding protein AT984_RS07360 PF00202 Aminotransferase class-III AT984_RS07365 PF00120 Glutamine synthetase, catalytic domain AT984_RS07375 PF01266 FAD dependent oxidoreductase AT984_RS07380 PF00202 Aminotransferase class-III AT984_RS07385 PF01037 Lrp/AsnC ligand binding domain AT984_RS07395 PF04305 Protein of unknown function (DUF455) AT984_RS07400 PF00132 Bacterial transferase hexapeptide (six repeats) AT984_RS07405 PF01430 Hsp33 protein AT984_RS07415 PF04973 Nicotinamide mononucleotide transporter AT984_RS07420 PF04977 Septum formation initiator AT984_RS07425 PF03952 Enolase, N-terminal domain AT984_RS07425 PF00113 Enolase, C-terminal TIM barrel domain AT984_RS07435 PF06418 CTP synthase N-terminus AT984_RS07435 PF00117 Glutamine amidotransferase class-I AT984_RS07445 PF00488 MutS domain V AT984_RS07445 PF05192 MutS domain III AT984_RS07445 PF05188 MutS domain II AT984_RS07445 PF01624 MutS domain I AT984_RS07445 PF05190 MutS family domain IV AT984_RS07450 PF00459 Inositol monophosphatase family AT984_RS07455 PF00588 SpoU rRNA Methylase family AT984_RS07460 PF00132 Bacterial transferase hexapeptide (six repeats) AT984_RS07465 PF00994 Probable molybdopterin binding domain AT984_RS07470 PF04751 Protein of unknown function (DUF615) AT984_RS07475 PF01523 Putative modulator of DNA gyrase AT984_RS07480 PF03480 Bacterial extracellular solute-binding protein, family 7 AT984_RS07485 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AT984_RS07500 PF09424 Yqey-like protein AT984_RS07505 PF01165 Ribosomal protein S21 AT984_RS07520 PF01925 Sulfite exporter TauE/SafE AT984_RS07540 PF10576 Iron-sulfur binding domain of endonuclease III AT984_RS07540 PF00730 HhH-GPD superfamily base excision DNA repair protein AT984_RS07540 PF00633 Helix-hairpin-helix motif AT984_RS07550 PF00535 Glycosyl transferase family 2 AT984_RS07565 PF04060 Putative Fe-S cluster AT984_RS07575 PF00155 Aminotransferase class I and II AT984_RS07580 PF00271 Helicase conserved C-terminal domain AT984_RS07580 PF04851 Type III restriction enzyme, res subunit AT984_RS07580 PF02151 UvrB/uvrC motif AT984_RS07580 PF12344 Ultra-violet resistance protein B AT984_RS07580 PF17757 UvrB interaction domain AT984_RS07585 PF02082 Transcriptional regulator AT984_RS07590 PF00266 Aminotransferase class-V AT984_RS07595 PF01592 NifU-like N terminal domain AT984_RS07600 PF01521 Iron-sulphur cluster biosynthesis AT984_RS07605 PF07743 HSCB C-terminal oligomerisation domain AT984_RS07610 PF00012 Hsp70 protein AT984_RS07615 PF00111 2Fe-2S iron-sulfur cluster binding domain AT984_RS07620 PF00814 Glycoprotease family AT984_RS07625 PF00011 Hsp20/alpha crystallin family AT984_RS07630 PF00312 Ribosomal protein S15 AT984_RS07635 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AT984_RS07635 PF00575 S1 RNA binding domain AT984_RS07635 PF03725 3' exoribonuclease family, domain 2 AT984_RS07635 PF00013 KH domain AT984_RS07635 PF01138 3' exoribonuclease family, domain 1 AT984_RS07640 PF08659 KR domain AT984_RS07640 PF00107 Zinc-binding dehydrogenase AT984_RS07640 PF00550 Phosphopantetheine attachment site AT984_RS07640 PF08240 Alcohol dehydrogenase GroES-like domain AT984_RS07640 PF00698 Acyl transferase domain AT984_RS07640 PF02801 Beta-ketoacyl synthase, C-terminal domain AT984_RS07640 PF16197 Ketoacyl-synthetase C-terminal extension AT984_RS07640 PF14765 Polyketide synthase dehydratase AT984_RS07640 PF00109 Beta-ketoacyl synthase, N-terminal domain AT984_RS07645 PF00121 Triosephosphate isomerase AT984_RS07650 PF03840 Preprotein translocase SecG subunit AT984_RS07660 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AT984_RS07665 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AT984_RS07670 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AT984_RS07675 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AT984_RS07685 PF10531 SLBB domain AT984_RS07685 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AT984_RS07685 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AT984_RS07690 PF00384 Molybdopterin oxidoreductase AT984_RS07690 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AT984_RS07690 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AT984_RS07695 PF00146 NADH dehydrogenase AT984_RS07700 PF12838 4Fe-4S dicluster domain AT984_RS07705 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AT984_RS07710 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AT984_RS07715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AT984_RS07715 PF00361 Proton-conducting membrane transporter AT984_RS07720 PF00361 Proton-conducting membrane transporter AT984_RS07720 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AT984_RS07725 PF00361 Proton-conducting membrane transporter AT984_RS07735 PF00293 NUDIX domain AT984_RS07745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS07750 PF00873 AcrB/AcrD/AcrF family AT984_RS07755 PF01565 FAD binding domain AT984_RS07755 PF02913 FAD linked oxidases, C-terminal domain AT984_RS07765 PF03631 Virulence factor BrkB AT984_RS07775 PF00155 Aminotransferase class I and II AT984_RS07780 PF01370 NAD dependent epimerase/dehydratase family AT984_RS07790 PF05161 MOFRL family AT984_RS07790 PF13660 Domain of unknown function (DUF4147) AT984_RS07800 PF01053 Cys/Met metabolism PLP-dependent enzyme AT984_RS07810 PF01264 Chorismate synthase AT984_RS07815 PF12832 MFS_1 like family AT984_RS07820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS07825 PF00873 AcrB/AcrD/AcrF family AT984_RS07840 PF03313 Serine dehydratase alpha chain AT984_RS07840 PF03315 Serine dehydratase beta chain AT984_RS07845 PF02347 Glycine cleavage system P-protein AT984_RS07850 PF01597 Glycine cleavage H-protein AT984_RS07855 PF01571 Aminomethyltransferase folate-binding domain AT984_RS07855 PF08669 Glycine cleavage T-protein C-terminal barrel domain AT984_RS07865 PF00583 Acetyltransferase (GNAT) family AT984_RS07870 PF01979 Amidohydrolase family AT984_RS07890 PF09722 Protein of unknown function (DUF2384) AT984_RS07905 PF00691 OmpA family AT984_RS07905 PF13677 Membrane MotB of proton-channel complex MotA/MotB AT984_RS07935 PF00171 Aldehyde dehydrogenase family AT984_RS07960 PF01425 Amidase AT984_RS07965 PF13520 Amino acid permease AT984_RS07970 PF01593 Flavin containing amine oxidoreductase AT984_RS07970 PF02027 RolB/RolC glucosidase family AT984_RS07975 PF00171 Aldehyde dehydrogenase family AT984_RS07980 PF01425 Amidase AT984_RS07990 PF00120 Glutamine synthetase, catalytic domain AT984_RS07990 PF03951 Glutamine synthetase, beta-Grasp domain AT984_RS07995 PF01266 FAD dependent oxidoreductase AT984_RS08040 PF00529 HlyD membrane-fusion protein of T1SS AT984_RS08040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS08045 PF13276 HTH-like domain AT984_RS08045 PF13683 Integrase core domain AT984_RS08050 PF01527 Transposase AT984_RS08055 PF00664 ABC transporter transmembrane region AT984_RS08055 PF00005 ABC transporter AT984_RS08055 PF03412 Peptidase C39 family AT984_RS08080 PF00672 HAMP domain AT984_RS08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS08080 PF07730 Histidine kinase AT984_RS08080 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AT984_RS08085 PF00196 Bacterial regulatory proteins, luxR family AT984_RS08085 PF00072 Response regulator receiver domain AT984_RS08100 PF00589 Phage integrase family AT984_RS08100 PF02899 Phage integrase, N-terminal SAM-like domain AT984_RS08105 PF00872 Transposase, Mutator family AT984_RS08110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS08110 PF00529 HlyD membrane-fusion protein of T1SS AT984_RS08115 PF00664 ABC transporter transmembrane region AT984_RS08115 PF00005 ABC transporter AT984_RS08115 PF03412 Peptidase C39 family AT984_RS08120 PF13700 Domain of unknown function (DUF4158) AT984_RS08120 PF01526 Tn3 transposase DDE domain AT984_RS08125 PF00672 HAMP domain AT984_RS08125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS08125 PF02203 Tar ligand binding domain homologue AT984_RS08145 PF02082 Transcriptional regulator AT984_RS08150 PF13746 4Fe-4S dicluster domain AT984_RS08150 PF12801 4Fe-4S binding domain AT984_RS08150 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AT984_RS08175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AT984_RS08180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AT984_RS08195 PF04055 Radical SAM superfamily AT984_RS08195 PF13186 Iron-sulfur cluster-binding domain AT984_RS08200 PF13404 AsnC-type helix-turn-helix domain AT984_RS08200 PF17805 AsnC-like ligand binding domain AT984_RS08205 PF17805 AsnC-like ligand binding domain AT984_RS08205 PF13404 AsnC-type helix-turn-helix domain AT984_RS08210 PF17805 AsnC-like ligand binding domain AT984_RS08220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AT984_RS08225 PF14824 Sirohaem biosynthesis protein central AT984_RS08225 PF10414 Sirohaem synthase dimerisation region AT984_RS08225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AT984_RS08235 PF00520 Ion transport protein AT984_RS08235 PF00027 Cyclic nucleotide-binding domain AT984_RS08250 PF08406 CbbQ/NirQ/NorQ C-terminal AT984_RS08250 PF07728 AAA domain (dynein-related subfamily) AT984_RS08255 PF00115 Cytochrome C and Quinol oxidase polypeptide I AT984_RS08260 PF00034 Cytochrome c AT984_RS08275 PF12679 ABC-2 family transporter protein AT984_RS08280 PF00005 ABC transporter AT984_RS08285 PF05048 Periplasmic copper-binding protein (NosD) AT984_RS08290 PF12801 4Fe-4S binding domain AT984_RS08290 PF04205 FMN-binding domain AT984_RS08295 PF18764 Nitrous oxide reductase propeller repeat AT984_RS08295 PF18793 Nitrous oxide reductase propeller repeat 2 AT984_RS08295 PF13473 Cupredoxin-like domain AT984_RS08305 PF18764 Nitrous oxide reductase propeller repeat AT984_RS08305 PF13473 Cupredoxin-like domain AT984_RS08305 PF18793 Nitrous oxide reductase propeller repeat 2 AT984_RS08315 PF02424 ApbE family AT984_RS08340 PF00072 Response regulator receiver domain AT984_RS08340 PF00196 Bacterial regulatory proteins, luxR family AT984_RS08345 PF01627 Hpt domain AT984_RS08345 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS08345 PF00072 Response regulator receiver domain AT984_RS08345 PF00672 HAMP domain AT984_RS08355 PF00248 Aldo/keto reductase family AT984_RS08370 PF01026 TatD related DNase AT984_RS08380 PF09115 DNA polymerase III, delta subunit, C terminal AT984_RS08385 PF02223 Thymidylate kinase AT984_RS08390 PF02618 YceG-like family AT984_RS08395 PF01571 Aminomethyltransferase folate-binding domain AT984_RS08410 PF07859 alpha/beta hydrolase fold AT984_RS08415 PF00465 Iron-containing alcohol dehydrogenase AT984_RS08420 PF00463 Isocitrate lyase family AT984_RS08425 PF01914 MarC family integral membrane protein AT984_RS08430 PF02899 Phage integrase, N-terminal SAM-like domain AT984_RS08430 PF00589 Phage integrase family AT984_RS08435 PF03401 Tripartite tricarboxylate transporter family receptor AT984_RS08440 PF08331 Domain of unknown function (DUF1730) AT984_RS08445 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AT984_RS08450 PF11741 AMIN domain AT984_RS08450 PF01520 N-acetylmuramoyl-L-alanine amidase AT984_RS08455 PF09335 SNARE associated Golgi protein AT984_RS08465 PF01119 DNA mismatch repair protein, C-terminal domain AT984_RS08465 PF08676 MutL C terminal dimerisation domain AT984_RS08475 PF01479 S4 domain AT984_RS08475 PF00849 RNA pseudouridylate synthase AT984_RS08485 PF00005 ABC transporter AT984_RS08490 PF12704 MacB-like periplasmic core domain AT984_RS08490 PF02687 FtsX-like permease family AT984_RS08500 PF07690 Major Facilitator Superfamily AT984_RS08505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS08505 PF00529 HlyD membrane-fusion protein of T1SS AT984_RS08510 PF02321 Outer membrane efflux protein AT984_RS08520 PF00005 ABC transporter AT984_RS08520 PF00664 ABC transporter transmembrane region AT984_RS08540 PF09619 Type III secretion system lipoprotein chaperone (YscW) AT984_RS08550 PF00303 Thymidylate synthase AT984_RS08555 PF00186 Dihydrofolate reductase AT984_RS08580 PF00270 DEAD/DEAH box helicase AT984_RS08580 PF00271 Helicase conserved C-terminal domain AT984_RS08585 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AT984_RS08585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AT984_RS08590 PF01207 Dihydrouridine synthase (Dus) AT984_RS08600 PF01268 Formate--tetrahydrofolate ligase AT984_RS08605 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS08610 PF00892 EamA-like transporter family AT984_RS08615 PF00009 Elongation factor Tu GTP binding domain AT984_RS08615 PF03144 Elongation factor Tu domain 2 AT984_RS08615 PF00679 Elongation factor G C-terminus AT984_RS08620 PF16198 tRNA pseudouridylate synthase B C-terminal domain AT984_RS08620 PF01509 TruB family pseudouridylate synthase (N terminal domain) AT984_RS08625 PF02033 Ribosome-binding factor A AT984_RS08630 PF08364 Bacterial translation initiation factor IF-2 associated region AT984_RS08630 PF11987 Translation-initiation factor 2 AT984_RS08630 PF04760 Translation initiation factor IF-2, N-terminal region AT984_RS08630 PF00009 Elongation factor Tu GTP binding domain AT984_RS08635 PF08529 NusA N-terminal domain AT984_RS08635 PF13184 NusA-like KH domain AT984_RS08640 PF17384 RimP C-terminal SH3 domain AT984_RS08640 PF02576 RimP N-terminal domain AT984_RS08650 PF01276 Orn/Lys/Arg decarboxylase, major domain AT984_RS08650 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AT984_RS08650 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AT984_RS08660 PF01145 SPFH domain / Band 7 family AT984_RS08670 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AT984_RS08670 PF12833 Helix-turn-helix domain AT984_RS08685 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AT984_RS08700 PF00005 ABC transporter AT984_RS08710 PF00557 Metallopeptidase family M24 AT984_RS08715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AT984_RS08715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AT984_RS08720 PF00501 AMP-binding enzyme AT984_RS08720 PF13193 AMP-binding enzyme C-terminal domain AT984_RS08750 PF00535 Glycosyl transferase family 2 AT984_RS08760 PF00793 DAHP synthetase I family AT984_RS08790 PF00733 Asparagine synthase AT984_RS08790 PF13537 Glutamine amidotransferase domain AT984_RS08805 PF00534 Glycosyl transferases group 1 AT984_RS08805 PF13439 Glycosyltransferase Family 4 AT984_RS08810 PF13439 Glycosyltransferase Family 4 AT984_RS08810 PF00534 Glycosyl transferases group 1 AT984_RS08815 PF00733 Asparagine synthase AT984_RS08815 PF13537 Glutamine amidotransferase domain AT984_RS08835 PF01522 Polysaccharide deacetylase AT984_RS08840 PF13401 AAA domain AT984_RS08840 PF01471 Putative peptidoglycan binding domain AT984_RS08850 PF13614 AAA domain AT984_RS08875 PF13180 PDZ domain AT984_RS08890 PF00072 Response regulator receiver domain AT984_RS08890 PF02954 Bacterial regulatory protein, Fis family AT984_RS08890 PF00158 Sigma-54 interaction domain AT984_RS08895 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS08895 PF02743 Cache domain AT984_RS08900 PF02397 Bacterial sugar transferase AT984_RS08905 PF00665 Integrase core domain AT984_RS08910 PF01695 IstB-like ATP binding protein AT984_RS08915 PF01653 NAD-dependent DNA ligase adenylation domain AT984_RS08915 PF03120 NAD-dependent DNA ligase OB-fold domain AT984_RS08915 PF00533 BRCA1 C Terminus (BRCT) domain AT984_RS08915 PF12826 Helix-hairpin-helix motif AT984_RS08915 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AT984_RS08920 PF01595 Cyclin M transmembrane N-terminal domain AT984_RS08920 PF03471 Transporter associated domain AT984_RS08920 PF00571 CBS domain AT984_RS08930 PF02463 RecF/RecN/SMC N terminal domain AT984_RS08930 PF06470 SMC proteins Flexible Hinge Domain AT984_RS08935 PF14489 QueF-like protein AT984_RS08940 PF00155 Aminotransferase class I and II AT984_RS08945 PF00132 Bacterial transferase hexapeptide (six repeats) AT984_RS08945 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AT984_RS08945 PF14602 Hexapeptide repeat of succinyl-transferase AT984_RS08950 PF00437 Type II/IV secretion system protein AT984_RS08955 PF07687 Peptidase dimerisation domain AT984_RS08955 PF01546 Peptidase family M20/M25/M40 AT984_RS08960 PF05175 Methyltransferase small domain AT984_RS08965 PF12848 ABC transporter AT984_RS08965 PF00005 ABC transporter AT984_RS08970 PF01047 MarR family AT984_RS08975 PF02566 OsmC-like protein AT984_RS08985 PF17763 Glutaminase/Asparaginase C-terminal domain AT984_RS08985 PF00710 Asparaginase, N-terminal AT984_RS08990 PF01726 LexA DNA binding domain AT984_RS08990 PF00717 Peptidase S24-like AT984_RS09025 PF00749 tRNA synthetases class I (E and Q), catalytic domain AT984_RS09030 PF01053 Cys/Met metabolism PLP-dependent enzyme AT984_RS09035 PF00156 Phosphoribosyl transferase domain AT984_RS09050 PF02875 Mur ligase family, glutamate ligase domain AT984_RS09050 PF08245 Mur ligase middle domain AT984_RS09055 PF17848 Acetyl-coA carboxylase zinc finger domain AT984_RS09055 PF01039 Carboxyl transferase domain AT984_RS09060 PF00290 Tryptophan synthase alpha chain AT984_RS09065 PF00291 Pyridoxal-phosphate dependent enzyme AT984_RS09070 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AT984_RS09075 PF01416 tRNA pseudouridine synthase AT984_RS09085 PF02774 Semialdehyde dehydrogenase, dimerisation domain AT984_RS09085 PF01118 Semialdehyde dehydrogenase, NAD binding domain AT984_RS09090 PF00180 Isocitrate/isopropylmalate dehydrogenase AT984_RS09095 PF00694 Aconitase C-terminal domain AT984_RS09100 PF00330 Aconitase family (aconitate hydratase) AT984_RS09105 PF03466 LysR substrate binding domain AT984_RS09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS09120 PF18140 Propionyl-coenzyme A carboxylase BT domain AT984_RS09120 PF02785 Biotin carboxylase C-terminal domain AT984_RS09120 PF00289 Biotin carboxylase, N-terminal domain AT984_RS09120 PF00364 Biotin-requiring enzyme AT984_RS09120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AT984_RS09130 PF01039 Carboxyl transferase domain AT984_RS09145 PF02310 B12 binding domain AT984_RS09145 PF01642 Methylmalonyl-CoA mutase AT984_RS09150 PF00392 Bacterial regulatory proteins, gntR family AT984_RS09150 PF07729 FCD domain AT984_RS09165 PF06594 Haemolysin-type calcium binding protein related domain AT984_RS09165 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AT984_RS09180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AT984_RS09190 PF02719 Polysaccharide biosynthesis protein AT984_RS09195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AT984_RS09205 PF02348 Cytidylyltransferase AT984_RS09210 PF00202 Aminotransferase class-III AT984_RS09225 PF16254 Domain of unknown function (DUF4910) AT984_RS09225 PF09940 Domain of unknown function (DUF2172) AT984_RS09225 PF16221 winged helix-turn-helix AT984_RS09230 PF03102 NeuB family AT984_RS09230 PF08666 SAF domain AT984_RS09240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AT984_RS09240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AT984_RS09250 PF00106 short chain dehydrogenase AT984_RS09265 PF00501 AMP-binding enzyme AT984_RS09265 PF13193 AMP-binding enzyme C-terminal domain AT984_RS09275 PF00550 Phosphopantetheine attachment site AT984_RS09300 PF03412 Peptidase C39 family AT984_RS09300 PF00664 ABC transporter transmembrane region AT984_RS09300 PF00005 ABC transporter AT984_RS09320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AT984_RS09320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AT984_RS09325 PF02417 Chromate transporter AT984_RS09330 PF02417 Chromate transporter AT984_RS09340 PF00588 SpoU rRNA Methylase family AT984_RS09340 PF08032 RNA 2'-O ribose methyltransferase substrate binding AT984_RS09350 PF13180 PDZ domain AT984_RS09350 PF17820 PDZ domain AT984_RS09355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS09355 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS09355 PF00989 PAS fold AT984_RS09360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AT984_RS09360 PF02769 AIR synthase related protein, C-terminal domain AT984_RS09360 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AT984_RS09370 PF01979 Amidohydrolase family AT984_RS09375 PF01156 Inosine-uridine preferring nucleoside hydrolase AT984_RS09380 PF00294 pfkB family carbohydrate kinase AT984_RS09385 PF00356 Bacterial regulatory proteins, lacI family AT984_RS09390 PF00285 Citrate synthase, C-terminal domain AT984_RS09395 PF03937 Flavinator of succinate dehydrogenase AT984_RS09400 PF13085 2Fe-2S iron-sulfur cluster binding domain AT984_RS09405 PF00890 FAD binding domain AT984_RS09405 PF02910 Fumarate reductase flavoprotein C-term AT984_RS09420 PF07702 UTRA domain AT984_RS09420 PF00392 Bacterial regulatory proteins, gntR family AT984_RS09425 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AT984_RS09425 PF00056 lactate/malate dehydrogenase, NAD binding domain AT984_RS09450 PF06434 Aconitate hydratase 2 N-terminus AT984_RS09450 PF11791 Aconitate B N-terminal domain AT984_RS09450 PF00330 Aconitase family (aconitate hydratase) AT984_RS09460 PF00155 Aminotransferase class I and II AT984_RS09460 PF00392 Bacterial regulatory proteins, gntR family AT984_RS09465 PF00665 Integrase core domain AT984_RS09470 PF01695 IstB-like ATP binding protein AT984_RS09475 PF00155 Aminotransferase class I and II AT984_RS09475 PF00392 Bacterial regulatory proteins, gntR family AT984_RS09495 PF11066 Protein of unknown function (DUF2867) AT984_RS09495 PF13460 NAD(P)H-binding AT984_RS09510 PF02817 e3 binding domain AT984_RS09510 PF00364 Biotin-requiring enzyme AT984_RS09510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AT984_RS09515 PF02779 Transketolase, pyrimidine binding domain AT984_RS09515 PF02780 Transketolase, C-terminal domain AT984_RS09540 PF08411 Exonuclease C-terminal AT984_RS09540 PF00929 Exonuclease AT984_RS09545 PF00912 Transglycosylase AT984_RS09545 PF00905 Penicillin binding protein transpeptidase domain AT984_RS09545 PF17092 Penicillin-binding protein OB-like domain AT984_RS09555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AT984_RS09555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AT984_RS09560 PF00478 IMP dehydrogenase / GMP reductase domain AT984_RS09565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AT984_RS09570 PF08264 Anticodon-binding domain of tRNA AT984_RS09570 PF00133 tRNA synthetases class I (I, L, M and V) AT984_RS09570 PF10458 Valyl tRNA synthetase tRNA binding arm AT984_RS09575 PF01842 ACT domain AT984_RS09575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AT984_RS09575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AT984_RS09580 PF00483 Nucleotidyl transferase AT984_RS09585 PF01206 Sulfurtransferase TusA AT984_RS09590 PF00293 NUDIX domain AT984_RS09590 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AT984_RS09590 PF09297 NADH pyrophosphatase zinc ribbon domain AT984_RS09595 PF00291 Pyridoxal-phosphate dependent enzyme AT984_RS09615 PF00111 2Fe-2S iron-sulfur cluster binding domain AT984_RS09615 PF00970 Oxidoreductase FAD-binding domain AT984_RS09615 PF00175 Oxidoreductase NAD-binding domain AT984_RS09625 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AT984_RS09625 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AT984_RS09630 PF00005 ABC transporter AT984_RS09635 PF12399 Branched-chain amino acid ATP-binding cassette transporter AT984_RS09635 PF00005 ABC transporter AT984_RS09640 PF11862 Domain of unknown function (DUF3382) AT984_RS09640 PF02653 Branched-chain amino acid transport system / permease component AT984_RS09645 PF02653 Branched-chain amino acid transport system / permease component AT984_RS09655 PF00589 Phage integrase family AT984_RS09695 PF01555 DNA methylase AT984_RS09725 PF13683 Integrase core domain AT984_RS09725 PF13276 HTH-like domain AT984_RS09730 PF00665 Integrase core domain AT984_RS09735 PF01695 IstB-like ATP binding protein AT984_RS09740 PF13683 Integrase core domain AT984_RS09740 PF13276 HTH-like domain AT984_RS09745 PF01527 Transposase AT984_RS09760 PF01555 DNA methylase AT984_RS09765 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS09765 PF16193 AAA C-terminal domain AT984_RS09765 PF12002 MgsA AAA+ ATPase C terminal AT984_RS09770 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS09770 PF12002 MgsA AAA+ ATPase C terminal AT984_RS09770 PF16193 AAA C-terminal domain AT984_RS09775 PF03548 Outer membrane lipoprotein carrier protein LolA AT984_RS09780 PF17854 FtsK alpha domain AT984_RS09780 PF09397 Ftsk gamma domain AT984_RS09780 PF01580 FtsK/SpoIIIE family AT984_RS09780 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AT984_RS09785 PF00027 Cyclic nucleotide-binding domain AT984_RS09785 PF13545 Crp-like helix-turn-helix domain AT984_RS09790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AT984_RS09795 PF00830 Ribosomal L28 family AT984_RS09800 PF00471 Ribosomal protein L33 AT984_RS09815 PF01189 16S rRNA methyltransferase RsmB/F AT984_RS09815 PF01029 NusB family AT984_RS09825 PF00551 Formyl transferase AT984_RS09830 PF00579 tRNA synthetases class I (W and Y) AT984_RS09840 PF01554 MatE AT984_RS09845 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS09845 PF00672 HAMP domain AT984_RS09845 PF16527 Two-component sensor protein CpxA, periplasmic domain AT984_RS09850 PF00072 Response regulator receiver domain AT984_RS09850 PF00486 Transcriptional regulatory protein, C terminal AT984_RS09860 PF12848 ABC transporter AT984_RS09860 PF00005 ABC transporter AT984_RS09865 PF00672 HAMP domain AT984_RS09865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS09865 PF02203 Tar ligand binding domain homologue AT984_RS09870 PF00043 Glutathione S-transferase, C-terminal domain AT984_RS09870 PF02798 Glutathione S-transferase, N-terminal domain AT984_RS09875 PF00271 Helicase conserved C-terminal domain AT984_RS09875 PF00270 DEAD/DEAH box helicase AT984_RS09880 PF13460 NAD(P)H-binding AT984_RS09890 PF01266 FAD dependent oxidoreductase AT984_RS09890 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AT984_RS09895 PF00672 HAMP domain AT984_RS09895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS09895 PF02203 Tar ligand binding domain homologue AT984_RS09900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS09900 PF00672 HAMP domain AT984_RS09900 PF02203 Tar ligand binding domain homologue AT984_RS09905 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AT984_RS09920 PF00793 DAHP synthetase I family AT984_RS09925 PF01180 Dihydroorotate dehydrogenase AT984_RS09935 PF01928 CYTH domain AT984_RS09950 PF00521 DNA gyrase/topoisomerase IV, subunit A AT984_RS09965 PF00204 DNA gyrase B AT984_RS09965 PF00986 DNA gyrase B subunit, carboxyl terminus AT984_RS09965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS09965 PF01751 Toprim domain AT984_RS09970 PF00850 Histone deacetylase domain AT984_RS09985 PF01795 MraW methylase family AT984_RS09990 PF00701 Dihydrodipicolinate synthetase family AT984_RS09995 PF06804 NlpB/DapX lipoprotein AT984_RS10015 PF08007 Cupin superfamily protein AT984_RS10020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AT984_RS10035 PF00692 dUTPase AT984_RS10040 PF02441 Flavoprotein AT984_RS10040 PF04127 DNA / pantothenate metabolism flavoprotein AT984_RS10050 PF02390 Putative methyltransferase AT984_RS10055 PF01791 DeoC/LacD family aldolase AT984_RS10060 PF01048 Phosphorylase superfamily AT984_RS10065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AT984_RS10070 PF02653 Branched-chain amino acid transport system / permease component AT984_RS10075 PF02653 Branched-chain amino acid transport system / permease component AT984_RS10080 PF00005 ABC transporter AT984_RS10085 PF02608 ABC transporter substrate-binding protein PnrA-like AT984_RS10095 PF07664 Ferrous iron transport protein B C terminus AT984_RS10095 PF02421 Ferrous iron transport protein B AT984_RS10095 PF07670 Nucleoside recognition AT984_RS10110 PF01734 Patatin-like phospholipase AT984_RS10115 PF00668 Condensation domain AT984_RS10115 PF00550 Phosphopantetheine attachment site AT984_RS10115 PF00501 AMP-binding enzyme AT984_RS10115 PF00975 Thioesterase domain AT984_RS10115 PF13193 AMP-binding enzyme C-terminal domain AT984_RS10120 PF09335 SNARE associated Golgi protein AT984_RS10130 PF07690 Major Facilitator Superfamily AT984_RS10140 PF00849 RNA pseudouridylate synthase AT984_RS10150 PF00106 short chain dehydrogenase AT984_RS10170 PF00293 NUDIX domain AT984_RS10175 PF01245 Ribosomal protein L19 AT984_RS10180 PF01746 tRNA (Guanine-1)-methyltransferase AT984_RS10185 PF01782 RimM N-terminal domain AT984_RS10185 PF05239 PRC-barrel domain AT984_RS10190 PF00886 Ribosomal protein S16 AT984_RS10210 PF01384 Phosphate transporter family AT984_RS10220 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AT984_RS10225 PF12627 Probable RNA and SrmB- binding site of polymerase A AT984_RS10225 PF12626 Polymerase A arginine-rich C-terminus AT984_RS10225 PF01743 Poly A polymerase head domain AT984_RS10235 PF00308 Bacterial dnaA protein AT984_RS10235 PF08299 Bacterial dnaA protein helix-turn-helix AT984_RS10235 PF11638 DnaA N-terminal domain AT984_RS10240 PF13369 Transglutaminase-like superfamily AT984_RS10245 PF03023 Lipid II flippase MurJ AT984_RS10250 PF01649 Ribosomal protein S20 AT984_RS10270 PF00202 Aminotransferase class-III AT984_RS10275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AT984_RS10275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AT984_RS10285 PF00069 Protein kinase domain AT984_RS10285 PF03793 PASTA domain AT984_RS10300 PF11852 Domain of unknown function (DUF3372) AT984_RS10300 PF03714 Bacterial pullanase-associated domain AT984_RS10300 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AT984_RS10300 PF18494 Pullulanase Ins domain AT984_RS10300 PF17967 Pullulanase N2 domain AT984_RS10305 PF00128 Alpha amylase, catalytic domain AT984_RS10310 PF10438 Cyclo-malto-dextrinase C-terminal domain AT984_RS10310 PF09087 Cyclomaltodextrinase, N-terminal AT984_RS10310 PF00128 Alpha amylase, catalytic domain AT984_RS10315 PF02446 4-alpha-glucanotransferase AT984_RS10320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AT984_RS10320 PF00128 Alpha amylase, catalytic domain AT984_RS10330 PF00128 Alpha amylase, catalytic domain AT984_RS10330 PF02806 Alpha amylase, C-terminal all-beta domain AT984_RS10330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AT984_RS10335 PF00343 Carbohydrate phosphorylase AT984_RS10340 PF00005 ABC transporter AT984_RS10340 PF08402 TOBE domain AT984_RS10345 PF01547 Bacterial extracellular solute-binding protein AT984_RS10350 PF14785 Maltose transport system permease protein MalF P2 domain AT984_RS10350 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS10355 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS10365 PF00326 Prolyl oligopeptidase family AT984_RS10375 PF02685 Glucokinase AT984_RS10380 PF02685 Glucokinase AT984_RS10380 PF01380 SIS domain AT984_RS10380 PF01418 Helix-turn-helix domain, rpiR family AT984_RS10385 PF13419 Haloacid dehalogenase-like hydrolase AT984_RS10395 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS10400 PF00005 ABC transporter AT984_RS10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS10410 PF03466 LysR substrate binding domain AT984_RS10415 PF03707 Bacterial signalling protein N terminal repeat AT984_RS10415 PF00563 EAL domain AT984_RS10415 PF13188 PAS domain AT984_RS10415 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS10420 PF01554 MatE AT984_RS10430 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS10430 PF03707 Bacterial signalling protein N terminal repeat AT984_RS10430 PF00563 EAL domain AT984_RS10440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS10440 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS10440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS10445 PF01042 Endoribonuclease L-PSP AT984_RS10455 PF00005 ABC transporter AT984_RS10460 PF00005 ABC transporter AT984_RS10460 PF12399 Branched-chain amino acid ATP-binding cassette transporter AT984_RS10470 PF02653 Branched-chain amino acid transport system / permease component AT984_RS10480 PF13193 AMP-binding enzyme C-terminal domain AT984_RS10480 PF00501 AMP-binding enzyme AT984_RS10485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS10485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS10485 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS10490 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS10500 PF00106 short chain dehydrogenase AT984_RS10505 PF01494 FAD binding domain AT984_RS10510 PF04199 Putative cyclase AT984_RS10515 PF00266 Aminotransferase class-V AT984_RS10520 PF03301 Tryptophan 2,3-dioxygenase AT984_RS10525 PF01464 Transglycosylase SLT domain AT984_RS10525 PF00497 Bacterial extracellular solute-binding proteins, family 3 AT984_RS10530 PF00072 Response regulator receiver domain AT984_RS10530 PF00989 PAS fold AT984_RS10530 PF01627 Hpt domain AT984_RS10530 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS10530 PF00497 Bacterial extracellular solute-binding proteins, family 3 AT984_RS10535 PF00557 Metallopeptidase family M24 AT984_RS10535 PF01321 Creatinase/Prolidase N-terminal domain AT984_RS10540 PF00072 Response regulator receiver domain AT984_RS10540 PF04397 LytTr DNA-binding domain AT984_RS10545 PF07694 5TMR of 5TMR-LYT AT984_RS10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS10545 PF06580 Histidine kinase AT984_RS10580 PF00873 AcrB/AcrD/AcrF family AT984_RS10585 PF01734 Patatin-like phospholipase AT984_RS10595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AT984_RS10595 PF02403 Seryl-tRNA synthetase N-terminal domain AT984_RS10600 PF02401 LytB protein AT984_RS10605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AT984_RS10610 PF04002 RadC-like JAB domain AT984_RS10615 PF01713 Smr domain AT984_RS10625 PF08453 Peptidase family M9 N-terminal AT984_RS10625 PF01752 Collagenase AT984_RS10630 PF00701 Dihydrodipicolinate synthetase family AT984_RS10635 PF00171 Aldehyde dehydrogenase family AT984_RS10640 PF01266 FAD dependent oxidoreductase AT984_RS10650 PF10609 NUBPL iron-transfer P-loop NTPase AT984_RS10655 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS10655 PF07694 5TMR of 5TMR-LYT AT984_RS10660 PF01739 CheR methyltransferase, SAM binding domain AT984_RS10660 PF03705 CheR methyltransferase, all-alpha domain AT984_RS10665 PF03975 CheD chemotactic sensory transduction AT984_RS10670 PF01339 CheB methylesterase AT984_RS10670 PF00072 Response regulator receiver domain AT984_RS10675 PF00563 EAL domain AT984_RS10675 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS10675 PF03707 Bacterial signalling protein N terminal repeat AT984_RS10680 PF06969 HemN C-terminal domain AT984_RS10680 PF04055 Radical SAM superfamily AT984_RS10685 PF01725 Ham1 family AT984_RS10690 PF03725 3' exoribonuclease family, domain 2 AT984_RS10690 PF01138 3' exoribonuclease family, domain 1 AT984_RS10700 PF03793 PASTA domain AT984_RS10700 PF00069 Protein kinase domain AT984_RS10705 PF03755 YicC-like family, N-terminal region AT984_RS10705 PF08340 Domain of unknown function (DUF1732) AT984_RS10710 PF05860 haemagglutination activity domain AT984_RS10725 PF07517 SecA DEAD-like domain AT984_RS10725 PF01043 SecA preprotein cross-linking domain AT984_RS10755 PF02321 Outer membrane efflux protein AT984_RS10765 PF00196 Bacterial regulatory proteins, luxR family AT984_RS10765 PF00072 Response regulator receiver domain AT984_RS10775 PF04102 SlyX AT984_RS10780 PF17773 UPF0176 acylphosphatase like domain AT984_RS10785 PF00561 alpha/beta hydrolase fold AT984_RS10790 PF00497 Bacterial extracellular solute-binding proteins, family 3 AT984_RS10795 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS10800 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS10810 PF00005 ABC transporter AT984_RS10830 PF03358 NADPH-dependent FMN reductase AT984_RS10835 PF17954 Quercetinase C-terminal cupin domain AT984_RS10835 PF02678 Pirin AT984_RS10840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS10840 PF03466 LysR substrate binding domain AT984_RS10845 PF00749 tRNA synthetases class I (E and Q), catalytic domain AT984_RS10850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AT984_RS10855 PF02308 MgtC family AT984_RS10860 PF01433 Peptidase family M1 domain AT984_RS10860 PF11838 ERAP1-like C-terminal domain AT984_RS10875 PF13411 MerR HTH family regulatory protein AT984_RS10890 PF01878 EVE domain AT984_RS10900 PF13280 WYL domain AT984_RS10900 PF08279 HTH domain AT984_RS10905 PF02463 RecF/RecN/SMC N terminal domain AT984_RS10905 PF06470 SMC proteins Flexible Hinge Domain AT984_RS10925 PF00271 Helicase conserved C-terminal domain AT984_RS10925 PF00270 DEAD/DEAH box helicase AT984_RS10940 PF04715 Anthranilate synthase component I, N terminal region AT984_RS10940 PF00425 chorismate binding enzyme AT984_RS10945 PF00929 Exonuclease AT984_RS10950 PF01435 Peptidase family M48 AT984_RS10950 PF16491 CAAX prenyl protease N-terminal, five membrane helices AT984_RS10955 PF01329 Pterin 4 alpha carbinolamine dehydratase AT984_RS10960 PF03193 RsgA GTPase AT984_RS10965 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AT984_RS10965 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AT984_RS10965 PF01276 Orn/Lys/Arg decarboxylase, major domain AT984_RS10975 PF13520 Amino acid permease AT984_RS10980 PF01276 Orn/Lys/Arg decarboxylase, major domain AT984_RS10980 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AT984_RS10980 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AT984_RS10995 PF01432 Peptidase family M3 AT984_RS11010 PF07152 YaeQ protein AT984_RS11015 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AT984_RS11015 PF00326 Prolyl oligopeptidase family AT984_RS11025 PF00501 AMP-binding enzyme AT984_RS11025 PF13193 AMP-binding enzyme C-terminal domain AT984_RS11030 PF00764 Arginosuccinate synthase AT984_RS11040 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS11040 PF00072 Response regulator receiver domain AT984_RS11040 PF01627 Hpt domain AT984_RS11045 PF01565 FAD binding domain AT984_RS11045 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AT984_RS11050 PF04461 Protein of unknown function (DUF520) AT984_RS11070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS11070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS11070 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS11075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS11075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS11080 PF00849 RNA pseudouridylate synthase AT984_RS11080 PF01479 S4 domain AT984_RS11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS11085 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS11085 PF01627 Hpt domain AT984_RS11085 PF00072 Response regulator receiver domain AT984_RS11090 PF06574 FAD synthetase AT984_RS11090 PF01687 Riboflavin kinase AT984_RS11095 PF06827 Zinc finger found in FPG and IleRS AT984_RS11095 PF08264 Anticodon-binding domain of tRNA AT984_RS11095 PF00133 tRNA synthetases class I (I, L, M and V) AT984_RS11100 PF01252 Signal peptidase (SPase) II AT984_RS11110 PF00072 Response regulator receiver domain AT984_RS11110 PF01627 Hpt domain AT984_RS11110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AT984_RS11110 PF00672 HAMP domain AT984_RS11110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS11110 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS11115 PF00107 Zinc-binding dehydrogenase AT984_RS11115 PF08240 Alcohol dehydrogenase GroES-like domain AT984_RS11135 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS11140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS11140 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS11140 PF00989 PAS fold AT984_RS11155 PF00083 Sugar (and other) transporter AT984_RS11155 PF08946 Osmosensory transporter coiled coil AT984_RS11185 PF04958 Arginine N-succinyltransferase beta subunit AT984_RS11190 PF12833 Helix-turn-helix domain AT984_RS11195 PF03606 C4-dicarboxylate anaerobic carrier AT984_RS11205 PF03575 Peptidase family S51 AT984_RS11210 PF07715 TonB-dependent Receptor Plug Domain AT984_RS11210 PF00593 TonB dependent receptor AT984_RS11215 PF03575 Peptidase family S51 AT984_RS11220 PF00593 TonB dependent receptor AT984_RS11220 PF07715 TonB-dependent Receptor Plug Domain AT984_RS11220 PF00593 TonB dependent receptor AT984_RS11220 PF07715 TonB-dependent Receptor Plug Domain AT984_RS11230 PF04337 Protein of unknown function, DUF480 AT984_RS11255 PF00563 EAL domain AT984_RS11255 PF03707 Bacterial signalling protein N terminal repeat AT984_RS11255 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS11265 PF01842 ACT domain AT984_RS11265 PF13840 ACT domain AT984_RS11265 PF00696 Amino acid kinase family AT984_RS11270 PF09179 TilS substrate binding domain AT984_RS11270 PF11734 TilS substrate C-terminal domain AT984_RS11270 PF01171 PP-loop family AT984_RS11275 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AT984_RS11280 PF12833 Helix-turn-helix domain AT984_RS11280 PF00730 HhH-GPD superfamily base excision DNA repair protein AT984_RS11280 PF06029 AlkA N-terminal domain AT984_RS11280 PF02805 Metal binding domain of Ada AT984_RS11285 PF01406 tRNA synthetases class I (C) catalytic domain AT984_RS11285 PF09190 DALR domain AT984_RS11295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AT984_RS11300 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AT984_RS11305 PF00149 Calcineurin-like phosphoesterase AT984_RS11310 PF06167 Glucose-regulated metallo-peptidase M90 AT984_RS11315 PF02861 Clp amino terminal domain, pathogenicity island component AT984_RS11315 PF07724 AAA domain (Cdc48 subfamily) AT984_RS11315 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS11315 PF17871 AAA lid domain AT984_RS11315 PF10431 C-terminal, D2-small domain, of ClpB protein AT984_RS11320 PF02617 ATP-dependent Clp protease adaptor protein ClpS AT984_RS11325 PF00313 'Cold-shock' DNA-binding domain AT984_RS11335 PF00180 Isocitrate/isopropylmalate dehydrogenase AT984_RS11340 PF03971 Monomeric isocitrate dehydrogenase AT984_RS11350 PF06969 HemN C-terminal domain AT984_RS11350 PF04055 Radical SAM superfamily AT984_RS11355 PF13545 Crp-like helix-turn-helix domain AT984_RS11355 PF00027 Cyclic nucleotide-binding domain AT984_RS11370 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AT984_RS11370 PF13746 4Fe-4S dicluster domain AT984_RS11370 PF12801 4Fe-4S binding domain AT984_RS11375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AT984_RS11375 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AT984_RS11390 PF00115 Cytochrome C and Quinol oxidase polypeptide I AT984_RS11400 PF00403 Heavy-metal-associated domain AT984_RS11410 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AT984_RS11410 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AT984_RS11415 PF02601 Exonuclease VII, large subunit AT984_RS11415 PF13742 OB-fold nucleic acid binding domain AT984_RS11420 PF01618 MotA/TolQ/ExbB proton channel family AT984_RS11425 PF02472 Biopolymer transport protein ExbD/TolR AT984_RS11430 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AT984_RS11435 PF03966 Trm112p-like protein AT984_RS11440 PF02348 Cytidylyltransferase AT984_RS11445 PF05191 Adenylate kinase, active site lid AT984_RS11450 PF00106 short chain dehydrogenase AT984_RS11460 PF02472 Biopolymer transport protein ExbD/TolR AT984_RS11465 PF02472 Biopolymer transport protein ExbD/TolR AT984_RS11470 PF01618 MotA/TolQ/ExbB proton channel family AT984_RS11485 PF07715 TonB-dependent Receptor Plug Domain AT984_RS11485 PF00593 TonB dependent receptor AT984_RS11490 PF00005 ABC transporter AT984_RS11490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AT984_RS11495 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS11495 PF12911 N-terminal TM domain of oligopeptide transport permease C AT984_RS11500 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS11510 PF02016 LD-carboxypeptidase N-terminal domain AT984_RS11510 PF17676 LD-carboxypeptidase C-terminal domain AT984_RS11515 PF14437 MafB19-like deaminase AT984_RS11525 PF00117 Glutamine amidotransferase class-I AT984_RS11525 PF00958 GMP synthase C terminal domain AT984_RS11525 PF02540 NAD synthase AT984_RS11530 PF07690 Major Facilitator Superfamily AT984_RS11535 PF00478 IMP dehydrogenase / GMP reductase domain AT984_RS11535 PF00571 CBS domain AT984_RS11545 PF03658 RnfH family Ubiquitin AT984_RS11550 PF03364 Polyketide cyclase / dehydrase and lipid transport AT984_RS11555 PF01668 SmpB protein AT984_RS11560 PF01053 Cys/Met metabolism PLP-dependent enzyme AT984_RS11565 PF04055 Radical SAM superfamily AT984_RS11565 PF18693 TRAM domain AT984_RS11565 PF00919 Uncharacterized protein family UPF0004 AT984_RS11570 PF05233 PHB accumulation regulatory domain AT984_RS11570 PF07879 PHB/PHA accumulation regulator DNA-binding domain AT984_RS11575 PF05649 Peptidase family M13 AT984_RS11575 PF01431 Peptidase family M13 AT984_RS11590 PF13291 ACT domain AT984_RS11590 PF04607 Region found in RelA / SpoT proteins AT984_RS11590 PF02824 TGS domain AT984_RS11600 PF00106 short chain dehydrogenase AT984_RS11610 PF00072 Response regulator receiver domain AT984_RS11610 PF00486 Transcriptional regulatory protein, C terminal AT984_RS11615 PF00672 HAMP domain AT984_RS11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS11615 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS11625 PF02542 YgbB family AT984_RS11630 PF01734 Patatin-like phospholipase AT984_RS11650 PF02542 YgbB family AT984_RS11650 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AT984_RS11655 PF01062 Bestrophin, RFP-TM, chloride channel AT984_RS11660 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AT984_RS11660 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AT984_RS11665 PF04055 Radical SAM superfamily AT984_RS11685 PF03461 TRCF domain AT984_RS11685 PF17757 UvrB interaction domain AT984_RS11685 PF00270 DEAD/DEAH box helicase AT984_RS11685 PF00271 Helicase conserved C-terminal domain AT984_RS11685 PF02559 CarD-like/TRCF domain AT984_RS11700 PF03737 Aldolase/RraA AT984_RS11705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AT984_RS11705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AT984_RS11705 PF00205 Thiamine pyrophosphate enzyme, central domain AT984_RS11720 PF02445 Quinolinate synthetase A protein AT984_RS11730 PF00890 FAD binding domain AT984_RS11730 PF02910 Fumarate reductase flavoprotein C-term AT984_RS11750 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS11750 PF17871 AAA lid domain AT984_RS11750 PF02861 Clp amino terminal domain, pathogenicity island component AT984_RS11750 PF07724 AAA domain (Cdc48 subfamily) AT984_RS11750 PF10431 C-terminal, D2-small domain, of ClpB protein AT984_RS11765 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS11765 PF03707 Bacterial signalling protein N terminal repeat AT984_RS11765 PF00563 EAL domain AT984_RS11770 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AT984_RS11775 PF02391 MoaE protein AT984_RS11815 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AT984_RS11815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AT984_RS11825 PF00893 Small Multidrug Resistance protein AT984_RS11830 PF00893 Small Multidrug Resistance protein AT984_RS11845 PF09278 MerR, DNA binding AT984_RS11845 PF00376 MerR family regulatory protein AT984_RS11855 PF02675 S-adenosylmethionine decarboxylase AT984_RS11860 PF02597 ThiS family AT984_RS11865 PF00994 Probable molybdopterin binding domain AT984_RS11865 PF03454 MoeA C-terminal region (domain IV) AT984_RS11865 PF03453 MoeA N-terminal region (domain I and II) AT984_RS11870 PF14821 Threonine synthase N terminus AT984_RS11870 PF00291 Pyridoxal-phosphate dependent enzyme AT984_RS11875 PF03447 Homoserine dehydrogenase, NAD binding domain AT984_RS11875 PF00742 Homoserine dehydrogenase AT984_RS11875 PF01842 ACT domain AT984_RS11880 PF00155 Aminotransferase class I and II AT984_RS11890 PF00578 AhpC/TSA family AT984_RS11895 PF13638 PIN domain AT984_RS11895 PF02562 PhoH-like protein AT984_RS11910 PF00877 NlpC/P60 family AT984_RS11920 PF00171 Aldehyde dehydrogenase family AT984_RS11920 PF01575 MaoC like domain AT984_RS11935 PF00970 Oxidoreductase FAD-binding domain AT984_RS11935 PF00111 2Fe-2S iron-sulfur cluster binding domain AT984_RS11935 PF00175 Oxidoreductase NAD-binding domain AT984_RS11940 PF01883 Iron-sulfur cluster assembly protein AT984_RS11945 PF05138 Phenylacetic acid catabolic protein AT984_RS11950 PF06243 Phenylacetic acid degradation B AT984_RS11955 PF05138 Phenylacetic acid catabolic protein AT984_RS11960 PF14535 AMP-binding enzyme C-terminal domain AT984_RS11960 PF00501 AMP-binding enzyme AT984_RS11965 PF03061 Thioesterase superfamily AT984_RS11970 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS11975 PF00132 Bacterial transferase hexapeptide (six repeats) AT984_RS11980 PF00672 HAMP domain AT984_RS11980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS11980 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS11980 PF00989 PAS fold AT984_RS11985 PF11849 Domain of unknown function (DUF3369) AT984_RS11990 PF06463 Molybdenum Cofactor Synthesis C AT984_RS11990 PF04055 Radical SAM superfamily AT984_RS11995 PF12804 MobA-like NTP transferase domain AT984_RS12000 PF00583 Acetyltransferase (GNAT) family AT984_RS12005 PF00994 Probable molybdopterin binding domain AT984_RS12005 PF03454 MoeA C-terminal region (domain IV) AT984_RS12005 PF03453 MoeA N-terminal region (domain I and II) AT984_RS12045 PF01597 Glycine cleavage H-protein AT984_RS12055 PF00009 Elongation factor Tu GTP binding domain AT984_RS12055 PF03144 Elongation factor Tu domain 2 AT984_RS12055 PF09106 Elongation factor SelB, winged helix AT984_RS12055 PF09107 Elongation factor SelB, winged helix AT984_RS12060 PF03841 L-seryl-tRNA selenium transferase AT984_RS12060 PF12390 Selenocysteine synthase N terminal AT984_RS12065 PF04216 Protein involved in formate dehydrogenase formation AT984_RS12070 PF01292 Prokaryotic cytochrome b561 AT984_RS12075 PF13247 4Fe-4S dicluster domain AT984_RS12075 PF09163 Formate dehydrogenase N, transmembrane AT984_RS12080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AT984_RS12080 PF00384 Molybdopterin oxidoreductase AT984_RS12080 PF01568 Molydopterin dinucleotide binding domain AT984_RS12085 PF01568 Molydopterin dinucleotide binding domain AT984_RS12085 PF00384 Molybdopterin oxidoreductase AT984_RS12085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AT984_RS12090 PF02634 FdhD/NarQ family AT984_RS12095 PF10609 NUBPL iron-transfer P-loop NTPase AT984_RS12105 PF03793 PASTA domain AT984_RS12105 PF00069 Protein kinase domain AT984_RS12120 PF00474 Sodium:solute symporter family AT984_RS12125 PF00929 Exonuclease AT984_RS12125 PF07733 Bacterial DNA polymerase III alpha NTPase domain AT984_RS12125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AT984_RS12125 PF02811 PHP domain AT984_RS12125 PF14579 Helix-hairpin-helix motif AT984_RS12130 PF00384 Molybdopterin oxidoreductase AT984_RS12130 PF01568 Molydopterin dinucleotide binding domain AT984_RS12130 PF18364 Molybdopterin oxidoreductase N-terminal domain AT984_RS12135 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AT984_RS12135 PF00271 Helicase conserved C-terminal domain AT984_RS12135 PF04408 Helicase associated domain (HA2) AT984_RS12135 PF11898 Domain of unknown function (DUF3418) AT984_RS12135 PF00270 DEAD/DEAH box helicase AT984_RS12140 PF00583 Acetyltransferase (GNAT) family AT984_RS12140 PF00696 Amino acid kinase family AT984_RS12145 PF04362 Bacterial Fe(2+) trafficking AT984_RS12155 PF00816 H-NS histone family AT984_RS12160 PF03707 Bacterial signalling protein N terminal repeat AT984_RS12160 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS12160 PF00563 EAL domain AT984_RS12165 PF01807 CHC2 zinc finger AT984_RS12165 PF08275 DNA primase catalytic core, N-terminal domain AT984_RS12165 PF08278 DNA primase DnaG DnaB-binding AT984_RS12165 PF10410 DnaB-helicase binding domain of primase AT984_RS12170 PF00140 Sigma-70 factor, region 1.2 AT984_RS12170 PF04545 Sigma-70, region 4 AT984_RS12170 PF04546 Sigma-70, non-essential region AT984_RS12170 PF04542 Sigma-70 region 2 AT984_RS12170 PF04539 Sigma-70 region 3 AT984_RS12170 PF03979 Sigma-70 factor, region 1.1 AT984_RS12175 PF00211 Adenylate and Guanylate cyclase catalytic domain AT984_RS12175 PF16701 Adenylate cyclase regulatory domain AT984_RS12190 PF00762 Ferrochelatase AT984_RS12195 PF01970 Tripartite tricarboxylate transporter TctA family AT984_RS12210 PF00072 Response regulator receiver domain AT984_RS12210 PF00486 Transcriptional regulatory protein, C terminal AT984_RS12215 PF08521 Two-component sensor kinase N-terminal AT984_RS12215 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS12215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS12220 PF01479 S4 domain AT984_RS12225 PF01025 GrpE AT984_RS12230 PF00012 Hsp70 protein AT984_RS12235 PF00226 DnaJ domain AT984_RS12235 PF01556 DnaJ C terminal domain AT984_RS12235 PF00684 DnaJ central domain AT984_RS12245 PF00072 Response regulator receiver domain AT984_RS12255 PF04055 Radical SAM superfamily AT984_RS12270 PF01527 Transposase AT984_RS12285 PF00578 AhpC/TSA family AT984_RS12290 PF01022 Bacterial regulatory protein, arsR family AT984_RS12295 PF02954 Bacterial regulatory protein, Fis family AT984_RS12295 PF00158 Sigma-54 interaction domain AT984_RS12295 PF00072 Response regulator receiver domain AT984_RS12300 PF01654 Cytochrome bd terminal oxidase subunit I AT984_RS12305 PF02322 Cytochrome bd terminal oxidase subunit II AT984_RS12310 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AT984_RS12310 PF00355 Rieske [2Fe-2S] domain AT984_RS12335 PF01527 Transposase AT984_RS12340 PF13683 Integrase core domain AT984_RS12340 PF13276 HTH-like domain AT984_RS12345 PF01695 IstB-like ATP binding protein AT984_RS12350 PF00665 Integrase core domain AT984_RS12355 PF00665 Integrase core domain AT984_RS12355 PF13333 Integrase core domain AT984_RS12355 PF13276 HTH-like domain AT984_RS12360 PF01527 Transposase AT984_RS12370 PF03796 DnaB-like helicase C terminal domain AT984_RS12370 PF00772 DnaB-like helicase N terminal domain AT984_RS12375 PF01281 Ribosomal protein L9, N-terminal domain AT984_RS12375 PF03948 Ribosomal protein L9, C-terminal domain AT984_RS12380 PF01084 Ribosomal protein S18 AT984_RS12390 PF01250 Ribosomal protein S6 AT984_RS12395 PF00474 Sodium:solute symporter family AT984_RS12400 PF00391 PEP-utilising enzyme, mobile domain AT984_RS12400 PF02896 PEP-utilising enzyme, TIM barrel domain AT984_RS12400 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AT984_RS12405 PF03618 Kinase/pyrophosphorylase AT984_RS12415 PF08032 RNA 2'-O ribose methyltransferase substrate binding AT984_RS12415 PF00588 SpoU rRNA Methylase family AT984_RS12420 PF01351 Ribonuclease HII AT984_RS12425 PF02684 Lipid-A-disaccharide synthetase AT984_RS12430 PF00132 Bacterial transferase hexapeptide (six repeats) AT984_RS12430 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AT984_RS12435 PF07977 FabA-like domain AT984_RS12440 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AT984_RS12440 PF00132 Bacterial transferase hexapeptide (six repeats) AT984_RS12450 PF07244 Surface antigen variable number repeat AT984_RS12450 PF01103 Surface antigen AT984_RS12455 PF17820 PDZ domain AT984_RS12455 PF02163 Peptidase family M50 AT984_RS12460 PF13288 DXP reductoisomerase C-terminal domain AT984_RS12460 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AT984_RS12460 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AT984_RS12470 PF01255 Putative undecaprenyl diphosphate synthase AT984_RS12475 PF01765 Ribosome recycling factor AT984_RS12480 PF00696 Amino acid kinase family AT984_RS12485 PF00889 Elongation factor TS AT984_RS12490 PF00318 Ribosomal protein S2 AT984_RS12495 PF01266 FAD dependent oxidoreductase AT984_RS12500 PF03853 YjeF-related protein N-terminus AT984_RS12500 PF01256 Carbohydrate kinase AT984_RS12505 PF08206 Ribonuclease B OB domain AT984_RS12505 PF00575 S1 RNA binding domain AT984_RS12505 PF17876 Cold shock domain AT984_RS12505 PF00773 RNB domain AT984_RS12505 PF08461 Ribonuclease R winged-helix domain AT984_RS12520 PF00709 Adenylosuccinate synthetase AT984_RS12525 PF13393 Histidyl-tRNA synthetase AT984_RS12530 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AT984_RS12535 PF01145 SPFH domain / Band 7 family AT984_RS12540 PF01145 SPFH domain / Band 7 family AT984_RS12540 PF12221 Bacterial membrane protein N terminal AT984_RS12545 PF16360 GTP-binding GTPase Middle Region AT984_RS12545 PF13167 GTP-binding GTPase N-terminal AT984_RS12545 PF01926 50S ribosome-binding GTPase AT984_RS12550 PF17209 Hfq protein AT984_RS12555 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AT984_RS12555 PF01926 50S ribosome-binding GTPase AT984_RS12560 PF13360 PQQ-like domain AT984_RS12565 PF09976 Tetratricopeptide repeat-like domain AT984_RS12570 PF03129 Anticodon binding domain AT984_RS12570 PF13393 Histidyl-tRNA synthetase AT984_RS12575 PF04551 GcpE protein AT984_RS12590 PF04055 Radical SAM superfamily AT984_RS12595 PF00334 Nucleoside diphosphate kinase AT984_RS12600 PF01479 S4 domain AT984_RS12600 PF00849 RNA pseudouridylate synthase AT984_RS12605 PF04079 Segregation and condensation complex subunit ScpB AT984_RS12610 PF00849 RNA pseudouridylate synthase AT984_RS12610 PF01479 S4 domain AT984_RS12615 PF13525 Outer membrane lipoprotein AT984_RS12620 PF04851 Type III restriction enzyme, res subunit AT984_RS12620 PF13307 Helicase C-terminal domain AT984_RS12640 PF03969 AFG1-like ATPase AT984_RS12645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AT984_RS12645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AT984_RS12650 PF00893 Small Multidrug Resistance protein AT984_RS12655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AT984_RS12655 PF00364 Biotin-requiring enzyme AT984_RS12655 PF02817 e3 binding domain AT984_RS12660 PF02779 Transketolase, pyrimidine binding domain AT984_RS12660 PF16078 2-oxoglutarate dehydrogenase N-terminus AT984_RS12660 PF16870 2-oxoglutarate dehydrogenase C-terminal AT984_RS12660 PF00676 Dehydrogenase E1 component AT984_RS12665 PF03171 2OG-Fe(II) oxygenase superfamily AT984_RS12665 PF14226 non-haem dioxygenase in morphine synthesis N-terminal AT984_RS12675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AT984_RS12680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AT984_RS12690 PF00487 Fatty acid desaturase AT984_RS12700 PF12806 Acetyl-CoA dehydrogenase C-terminal like AT984_RS12700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS12700 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS12700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS12705 PF00766 Electron transfer flavoprotein FAD-binding domain AT984_RS12705 PF01012 Electron transfer flavoprotein domain AT984_RS12710 PF01012 Electron transfer flavoprotein domain AT984_RS12715 PF01177 Asp/Glu/Hydantoin racemase AT984_RS12730 PF00563 EAL domain AT984_RS12730 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS12730 PF03707 Bacterial signalling protein N terminal repeat AT984_RS12735 PF00072 Response regulator receiver domain AT984_RS12735 PF00196 Bacterial regulatory proteins, luxR family AT984_RS12740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS12740 PF07730 Histidine kinase AT984_RS12740 PF05231 MASE1 AT984_RS12750 PF00072 Response regulator receiver domain AT984_RS12755 PF01627 Hpt domain AT984_RS12755 PF02895 Signal transducing histidine kinase, homodimeric domain AT984_RS12755 PF01584 CheW-like domain AT984_RS12755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS12755 PF09078 CheY binding AT984_RS12760 PF02203 Tar ligand binding domain homologue AT984_RS12760 PF00672 HAMP domain AT984_RS12760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS12765 PF01584 CheW-like domain AT984_RS12770 PF00672 HAMP domain AT984_RS12770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS12770 PF02203 Tar ligand binding domain homologue AT984_RS12775 PF00672 HAMP domain AT984_RS12775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS12775 PF02203 Tar ligand binding domain homologue AT984_RS12785 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AT984_RS12815 PF11867 Domain of unknown function (DUF3387) AT984_RS12815 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AT984_RS12815 PF18766 SWI2/SNF2 ATPase AT984_RS12820 PF02661 Fic/DOC family AT984_RS12820 PF13784 Fic/DOC family N-terminal AT984_RS12825 PF13087 AAA domain AT984_RS12825 PF13195 Protein of unknown function (DUF4011) AT984_RS12825 PF13086 AAA domain AT984_RS12825 PF13195 Protein of unknown function (DUF4011) AT984_RS12825 PF13086 AAA domain AT984_RS12825 PF13087 AAA domain AT984_RS12830 PF01420 Type I restriction modification DNA specificity domain AT984_RS12835 PF02384 N-6 DNA Methylase AT984_RS12860 PF01527 Transposase AT984_RS12865 PF00665 Integrase core domain AT984_RS12865 PF13333 Integrase core domain AT984_RS12865 PF13276 HTH-like domain AT984_RS12875 PF13817 IS66 C-terminal element AT984_RS12875 PF13005 zinc-finger binding domain of transposase IS66 AT984_RS12875 PF03050 Transposase IS66 family AT984_RS12875 PF13007 Transposase C of IS166 homeodomain AT984_RS12880 PF01695 IstB-like ATP binding protein AT984_RS12885 PF00665 Integrase core domain AT984_RS12905 PF00347 Ribosomal protein L6 AT984_RS12935 PF01695 IstB-like ATP binding protein AT984_RS12940 PF00665 Integrase core domain AT984_RS12950 PF01844 HNH endonuclease AT984_RS12965 PF02872 5'-nucleotidase, C-terminal domain AT984_RS12965 PF17936 Bacterial Ig domain AT984_RS12965 PF00149 Calcineurin-like phosphoesterase AT984_RS12970 PF00593 TonB dependent receptor AT984_RS12975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS12975 PF00672 HAMP domain AT984_RS12975 PF02203 Tar ligand binding domain homologue AT984_RS12980 PF00171 Aldehyde dehydrogenase family AT984_RS12985 PF02272 DHHA1 domain AT984_RS12985 PF01411 tRNA synthetases class II (A) AT984_RS12985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AT984_RS12990 PF03695 Uncharacterised protein family (UPF0149) AT984_RS13000 PF00583 Acetyltransferase (GNAT) family AT984_RS13010 PF02627 Carboxymuconolactone decarboxylase family AT984_RS13015 PF13302 Acetyltransferase (GNAT) domain AT984_RS13025 PF13443 Cro/C1-type HTH DNA-binding domain AT984_RS13045 PF00561 alpha/beta hydrolase fold AT984_RS13055 PF03462 PCRF domain AT984_RS13055 PF00472 RF-1 domain AT984_RS13060 PF11940 Domain of unknown function (DUF3458) Ig-like fold AT984_RS13060 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AT984_RS13060 PF01433 Peptidase family M1 domain AT984_RS13065 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AT984_RS13095 PF01527 Transposase AT984_RS13100 PF13683 Integrase core domain AT984_RS13100 PF13276 HTH-like domain AT984_RS13105 PF00970 Oxidoreductase FAD-binding domain AT984_RS13105 PF00042 Globin AT984_RS13105 PF00175 Oxidoreductase NAD-binding domain AT984_RS13130 PF01593 Flavin containing amine oxidoreductase AT984_RS13145 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AT984_RS13160 PF01547 Bacterial extracellular solute-binding protein AT984_RS13165 PF00072 Response regulator receiver domain AT984_RS13165 PF00486 Transcriptional regulatory protein, C terminal AT984_RS13170 PF00672 HAMP domain AT984_RS13170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS13170 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS13175 PF04820 Tryptophan halogenase AT984_RS13200 PF07690 Major Facilitator Superfamily AT984_RS13210 PF01557 Fumarylacetoacetate (FAA) hydrolase family AT984_RS13220 PF01494 FAD binding domain AT984_RS13245 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AT984_RS13245 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AT984_RS13250 PF10397 Adenylosuccinate lyase C-terminus AT984_RS13250 PF00206 Lyase AT984_RS13260 PF01595 Cyclin M transmembrane N-terminal domain AT984_RS13260 PF03471 Transporter associated domain AT984_RS13260 PF00571 CBS domain AT984_RS13265 PF00149 Calcineurin-like phosphoesterase AT984_RS13275 PF04972 BON domain AT984_RS13280 PF02374 Anion-transporting ATPase AT984_RS13285 PF03358 NADPH-dependent FMN reductase AT984_RS13290 PF01758 Sodium Bile acid symporter family AT984_RS13295 PF01451 Low molecular weight phosphotyrosine protein phosphatase AT984_RS13325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AT984_RS13330 PF01966 HD domain AT984_RS13330 PF11871 Domain of unknown function (DUF3391) AT984_RS13335 PF00034 Cytochrome c AT984_RS13340 PF01434 Peptidase family M41 AT984_RS13340 PF17862 AAA+ lid domain AT984_RS13340 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS13350 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AT984_RS13350 PF07676 WD40-like Beta Propeller Repeat AT984_RS13350 PF00326 Prolyl oligopeptidase family AT984_RS13360 PF17243 POTRA domain TamA domain 1 AT984_RS13360 PF01103 Surface antigen AT984_RS13365 PF04357 TamB, inner membrane protein subunit of TAM complex AT984_RS13375 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS13380 PF00005 ABC transporter AT984_RS13380 PF08402 TOBE domain AT984_RS13385 PF03572 Peptidase family S41 AT984_RS13385 PF13180 PDZ domain AT984_RS13390 PF00899 ThiF family AT984_RS13400 PF00491 Arginase family AT984_RS13420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS13420 PF00672 HAMP domain AT984_RS13420 PF02203 Tar ligand binding domain homologue AT984_RS13435 PF01979 Amidohydrolase family AT984_RS13445 PF07702 UTRA domain AT984_RS13445 PF00392 Bacterial regulatory proteins, gntR family AT984_RS13450 PF17391 Urocanase N-terminal domain AT984_RS13450 PF01175 Urocanase Rossmann-like domain AT984_RS13450 PF17392 Urocanase C-terminal domain AT984_RS13455 PF00221 Aromatic amino acid lyase AT984_RS13460 PF13407 Periplasmic binding protein domain AT984_RS13465 PF01590 GAF domain AT984_RS13465 PF00563 EAL domain AT984_RS13465 PF00360 Phytochrome region AT984_RS13465 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS13470 PF13091 PLD-like domain AT984_RS13475 PF03372 Endonuclease/Exonuclease/phosphatase family AT984_RS13480 PF00293 NUDIX domain AT984_RS13485 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS13485 PF02743 Cache domain AT984_RS13485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS13490 PF02938 GAD domain AT984_RS13490 PF00152 tRNA synthetases class II (D, K and N) AT984_RS13490 PF01336 OB-fold nucleic acid binding domain AT984_RS13510 PF03109 ABC1 family AT984_RS13520 PF02397 Bacterial sugar transferase AT984_RS13530 PF16363 GDP-mannose 4,6 dehydratase AT984_RS13535 PF01050 Mannose-6-phosphate isomerase AT984_RS13535 PF00483 Nucleotidyl transferase AT984_RS13540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AT984_RS13540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AT984_RS13540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AT984_RS13545 PF16363 GDP-mannose 4,6 dehydratase AT984_RS13550 PF04321 RmlD substrate binding domain AT984_RS13555 PF00483 Nucleotidyl transferase AT984_RS13560 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AT984_RS13565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AT984_RS13565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AT984_RS13565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AT984_RS13570 PF01370 NAD dependent epimerase/dehydratase family AT984_RS13575 PF02350 UDP-N-acetylglucosamine 2-epimerase AT984_RS13580 PF03808 Glycosyl transferase WecB/TagA/CpsF family AT984_RS13595 PF00534 Glycosyl transferases group 1 AT984_RS13595 PF13439 Glycosyltransferase Family 4 AT984_RS13605 PF13537 Glutamine amidotransferase domain AT984_RS13605 PF00733 Asparagine synthase AT984_RS13610 PF00535 Glycosyl transferase family 2 AT984_RS13615 PF00535 Glycosyl transferase family 2 AT984_RS13635 PF01370 NAD dependent epimerase/dehydratase family AT984_RS13640 PF16363 GDP-mannose 4,6 dehydratase AT984_RS13650 PF09721 Transmembrane exosortase (Exosortase_EpsH) AT984_RS13665 PF10531 SLBB domain AT984_RS13665 PF02563 Polysaccharide biosynthesis/export protein AT984_RS13675 PF01209 ubiE/COQ5 methyltransferase family AT984_RS13690 PF02885 Glycosyl transferase family, helical bundle domain AT984_RS13700 PF01925 Sulfite exporter TauE/SafE AT984_RS13705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AT984_RS13705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AT984_RS13715 PF01507 Phosphoadenosine phosphosulfate reductase family AT984_RS13720 PF01507 Phosphoadenosine phosphosulfate reductase family AT984_RS13725 PF00009 Elongation factor Tu GTP binding domain AT984_RS13730 PF14824 Sirohaem biosynthesis protein central AT984_RS13730 PF10414 Sirohaem synthase dimerisation region AT984_RS13730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AT984_RS13735 PF00037 4Fe-4S binding domain AT984_RS13735 PF11953 Domain of unknown function (DUF3470) AT984_RS13740 PF07992 Pyridine nucleotide-disulphide oxidoreductase AT984_RS13745 PF00593 TonB dependent receptor AT984_RS13745 PF07715 TonB-dependent Receptor Plug Domain AT984_RS13770 PF00210 Ferritin-like domain AT984_RS13790 PF07516 SecA Wing and Scaffold domain AT984_RS13790 PF01043 SecA preprotein cross-linking domain AT984_RS13790 PF07517 SecA DEAD-like domain AT984_RS13790 PF02810 SEC-C motif AT984_RS13805 PF04386 Stringent starvation protein B AT984_RS13810 PF02798 Glutathione S-transferase, N-terminal domain AT984_RS13810 PF00043 Glutathione S-transferase, C-terminal domain AT984_RS13815 PF02167 Cytochrome C1 family AT984_RS13820 PF00033 Cytochrome b/b6/petB AT984_RS13820 PF00032 Cytochrome b(C-terminal)/b6/petD AT984_RS13825 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AT984_RS13825 PF00355 Rieske [2Fe-2S] domain AT984_RS13830 PF01741 Large-conductance mechanosensitive channel, MscL AT984_RS13840 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AT984_RS13845 PF01784 NIF3 (NGG1p interacting factor 3) AT984_RS13850 PF13180 PDZ domain AT984_RS13850 PF17820 PDZ domain AT984_RS13855 PF00902 Sec-independent protein translocase protein (TatC) AT984_RS13860 PF02416 mttA/Hcf106 family AT984_RS13865 PF02416 mttA/Hcf106 family AT984_RS13880 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AT984_RS13885 PF01502 Phosphoribosyl-AMP cyclohydrolase AT984_RS13890 PF00293 NUDIX domain AT984_RS13905 PF00149 Calcineurin-like phosphoesterase AT984_RS13915 PF00440 Bacterial regulatory proteins, tetR family AT984_RS13920 PF00072 Response regulator receiver domain AT984_RS13920 PF00196 Bacterial regulatory proteins, luxR family AT984_RS13930 PF00696 Amino acid kinase family AT984_RS13935 PF02580 D-Tyr-tRNA(Tyr) deacylase AT984_RS13940 PF03401 Tripartite tricarboxylate transporter family receptor AT984_RS13945 PF00501 AMP-binding enzyme AT984_RS13945 PF14535 AMP-binding enzyme C-terminal domain AT984_RS13955 PF00005 ABC transporter AT984_RS13975 PF00005 ABC transporter AT984_RS13975 PF12399 Branched-chain amino acid ATP-binding cassette transporter AT984_RS13980 PF00501 AMP-binding enzyme AT984_RS13985 PF00027 Cyclic nucleotide-binding domain AT984_RS13985 PF13545 Crp-like helix-turn-helix domain AT984_RS14010 PF02811 PHP domain AT984_RS14010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AT984_RS14010 PF14579 Helix-hairpin-helix motif AT984_RS14010 PF07733 Bacterial DNA polymerase III alpha NTPase domain AT984_RS14020 PF12833 Helix-turn-helix domain AT984_RS14020 PF01965 DJ-1/PfpI family AT984_RS14025 PF00857 Isochorismatase family AT984_RS14030 PF00440 Bacterial regulatory proteins, tetR family AT984_RS14035 PF00111 2Fe-2S iron-sulfur cluster binding domain AT984_RS14035 PF00970 Oxidoreductase FAD-binding domain AT984_RS14035 PF00175 Oxidoreductase NAD-binding domain AT984_RS14040 PF00487 Fatty acid desaturase AT984_RS14050 PF00106 short chain dehydrogenase AT984_RS14060 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AT984_RS14065 PF09335 SNARE associated Golgi protein AT984_RS14070 PF01207 Dihydrouridine synthase (Dus) AT984_RS14075 PF02954 Bacterial regulatory protein, Fis family AT984_RS14080 PF02142 MGS-like domain AT984_RS14080 PF01808 AICARFT/IMPCHase bienzyme AT984_RS14090 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AT984_RS14100 PF00732 GMC oxidoreductase AT984_RS14100 PF05199 GMC oxidoreductase AT984_RS14115 PF02075 Crossover junction endodeoxyribonuclease RuvC AT984_RS14130 PF00005 ABC transporter AT984_RS14130 PF00664 ABC transporter transmembrane region AT984_RS14135 PF00664 ABC transporter transmembrane region AT984_RS14135 PF00005 ABC transporter AT984_RS14145 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AT984_RS14150 PF07730 Histidine kinase AT984_RS14155 PF00091 Tubulin/FtsZ family, GTPase domain AT984_RS14155 PF12327 FtsZ family, C-terminal domain AT984_RS14160 PF02491 SHS2 domain inserted in FTSA AT984_RS14165 PF03799 Cell division protein FtsQ AT984_RS14165 PF08478 POTRA domain, FtsQ-type AT984_RS14170 PF01820 D-ala D-ala ligase N-terminus AT984_RS14170 PF07478 D-ala D-ala ligase C-terminus AT984_RS14175 PF02875 Mur ligase family, glutamate ligase domain AT984_RS14175 PF01225 Mur ligase family, catalytic domain AT984_RS14175 PF08245 Mur ligase middle domain AT984_RS14180 PF03033 Glycosyltransferase family 28 N-terminal domain AT984_RS14180 PF04101 Glycosyltransferase family 28 C-terminal domain AT984_RS14185 PF01098 Cell cycle protein AT984_RS14190 PF08245 Mur ligase middle domain AT984_RS14190 PF02875 Mur ligase family, glutamate ligase domain AT984_RS14195 PF00953 Glycosyl transferase family 4 AT984_RS14195 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AT984_RS14200 PF02875 Mur ligase family, glutamate ligase domain AT984_RS14200 PF01225 Mur ligase family, catalytic domain AT984_RS14200 PF08245 Mur ligase middle domain AT984_RS14205 PF08245 Mur ligase middle domain AT984_RS14205 PF02875 Mur ligase family, glutamate ligase domain AT984_RS14210 PF03717 Penicillin-binding Protein dimerisation domain AT984_RS14210 PF00905 Penicillin binding protein transpeptidase domain AT984_RS14220 PF01795 MraW methylase family AT984_RS14225 PF02381 MraZ protein, putative antitoxin-like AT984_RS14230 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS14230 PF01627 Hpt domain AT984_RS14230 PF00072 Response regulator receiver domain AT984_RS14230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS14235 PF00194 Eukaryotic-type carbonic anhydrase AT984_RS14240 PF07690 Major Facilitator Superfamily AT984_RS14245 PF13532 2OG-Fe(II) oxygenase superfamily AT984_RS14260 PF00326 Prolyl oligopeptidase family AT984_RS14260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AT984_RS14265 PF00326 Prolyl oligopeptidase family AT984_RS14265 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AT984_RS14270 PF00773 RNB domain AT984_RS14280 PF08501 Shikimate dehydrogenase substrate binding domain AT984_RS14280 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AT984_RS14280 PF01488 Shikimate / quinate 5-dehydrogenase AT984_RS14285 PF00912 Transglycosylase AT984_RS14295 PF00578 AhpC/TSA family AT984_RS14300 PF01220 Dehydroquinase class II AT984_RS14305 PF00364 Biotin-requiring enzyme AT984_RS14310 PF02785 Biotin carboxylase C-terminal domain AT984_RS14310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AT984_RS14310 PF00289 Biotin carboxylase, N-terminal domain AT984_RS14330 PF00268 Ribonucleotide reductase, small chain AT984_RS14335 PF03477 ATP cone domain AT984_RS14335 PF02867 Ribonucleotide reductase, barrel domain AT984_RS14335 PF00317 Ribonucleotide reductase, all-alpha domain AT984_RS14340 PF02954 Bacterial regulatory protein, Fis family AT984_RS14340 PF00072 Response regulator receiver domain AT984_RS14340 PF00158 Sigma-54 interaction domain AT984_RS14345 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS14345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS14360 PF02978 Signal peptide binding domain AT984_RS14360 PF02881 SRP54-type protein, helical bundle domain AT984_RS14360 PF00448 SRP54-type protein, GTPase domain AT984_RS14365 PF00448 SRP54-type protein, GTPase domain AT984_RS14365 PF02881 SRP54-type protein, helical bundle domain AT984_RS14370 PF02423 Ornithine cyclodeaminase/mu-crystallin family AT984_RS14380 PF00501 AMP-binding enzyme AT984_RS14385 PF05853 beta-keto acid cleavage enzyme AT984_RS14390 PF02785 Biotin carboxylase C-terminal domain AT984_RS14390 PF00289 Biotin carboxylase, N-terminal domain AT984_RS14390 PF00364 Biotin-requiring enzyme AT984_RS14390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AT984_RS14395 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS14400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS14400 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS14400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS14405 PF01039 Carboxyl transferase domain AT984_RS14420 PF13411 MerR HTH family regulatory protein AT984_RS14425 PF00072 Response regulator receiver domain AT984_RS14425 PF00486 Transcriptional regulatory protein, C terminal AT984_RS14430 PF00672 HAMP domain AT984_RS14430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS14430 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS14445 PF04185 Phosphoesterase family AT984_RS14445 PF05506 Domain of unknown function (DUF756) AT984_RS14465 PF01938 TRAM domain AT984_RS14465 PF00919 Uncharacterized protein family UPF0004 AT984_RS14465 PF04055 Radical SAM superfamily AT984_RS14475 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AT984_RS14475 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AT984_RS14475 PF01488 Shikimate / quinate 5-dehydrogenase AT984_RS14480 PF00472 RF-1 domain AT984_RS14480 PF03462 PCRF domain AT984_RS14485 PF05175 Methyltransferase small domain AT984_RS14485 PF17827 PrmC N-terminal domain AT984_RS14495 PF00462 Glutaredoxin AT984_RS14500 PF02441 Flavoprotein AT984_RS14505 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AT984_RS14505 PF01464 Transglycosylase SLT domain AT984_RS14510 PF04073 Aminoacyl-tRNA editing domain AT984_RS14510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AT984_RS14510 PF03129 Anticodon binding domain AT984_RS14515 PF00293 NUDIX domain AT984_RS14520 PF01472 PUA domain AT984_RS14520 PF00696 Amino acid kinase family AT984_RS14525 PF01018 GTP1/OBG AT984_RS14525 PF01926 50S ribosome-binding GTPase AT984_RS14530 PF01016 Ribosomal L27 protein AT984_RS14535 PF00829 Ribosomal prokaryotic L21 protein AT984_RS14540 PF00348 Polyprenyl synthetase AT984_RS14550 PF01323 DSBA-like thioredoxin domain AT984_RS14560 PF13538 UvrD-like helicase C-terminal domain AT984_RS14565 PF12705 PD-(D/E)XK nuclease superfamily AT984_RS14565 PF00580 UvrD/REP helicase N-terminal domain AT984_RS14565 PF13361 UvrD-like helicase C-terminal domain AT984_RS14570 PF17946 RecC C-terminal domain AT984_RS14595 PF00291 Pyridoxal-phosphate dependent enzyme AT984_RS14605 PF13180 PDZ domain AT984_RS14615 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AT984_RS14615 PF12833 Helix-turn-helix domain AT984_RS14625 PF01979 Amidohydrolase family AT984_RS14640 PF00005 ABC transporter AT984_RS14645 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS14650 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS14655 PF00497 Bacterial extracellular solute-binding proteins, family 3 AT984_RS14660 PF03466 LysR substrate binding domain AT984_RS14660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS14670 PF00664 ABC transporter transmembrane region AT984_RS14670 PF00005 ABC transporter AT984_RS14675 PF03061 Thioesterase superfamily AT984_RS14685 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS14695 PF02803 Thiolase, C-terminal domain AT984_RS14695 PF00108 Thiolase, N-terminal domain AT984_RS14700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AT984_RS14700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AT984_RS14700 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS14710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS14710 PF12806 Acetyl-CoA dehydrogenase C-terminal like AT984_RS14710 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS14710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS14735 PF00072 Response regulator receiver domain AT984_RS14735 PF00486 Transcriptional regulatory protein, C terminal AT984_RS14745 PF09078 CheY binding AT984_RS14745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS14745 PF01627 Hpt domain AT984_RS14745 PF01584 CheW-like domain AT984_RS14745 PF02895 Signal transducing histidine kinase, homodimeric domain AT984_RS14750 PF02203 Tar ligand binding domain homologue AT984_RS14750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS14750 PF00672 HAMP domain AT984_RS14755 PF08447 PAS fold AT984_RS14755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS14760 PF01584 CheW-like domain AT984_RS14765 PF01739 CheR methyltransferase, SAM binding domain AT984_RS14765 PF03705 CheR methyltransferase, all-alpha domain AT984_RS14770 PF03975 CheD chemotactic sensory transduction AT984_RS14775 PF00072 Response regulator receiver domain AT984_RS14775 PF01339 CheB methylesterase AT984_RS14780 PF00486 Transcriptional regulatory protein, C terminal AT984_RS14780 PF00072 Response regulator receiver domain AT984_RS14785 PF02203 Tar ligand binding domain homologue AT984_RS14785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS14785 PF00672 HAMP domain AT984_RS14790 PF00437 Type II/IV secretion system protein AT984_RS14790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AT984_RS14795 PF00482 Type II secretion system (T2SS), protein F AT984_RS14800 PF06750 Bacterial Peptidase A24 N-terminal domain AT984_RS14800 PF01478 Type IV leader peptidase family AT984_RS14805 PF01121 Dephospho-CoA kinase AT984_RS14810 PF07072 Cell division protein AT984_RS14815 PF03884 DNA gyrase inhibitor YacG AT984_RS14825 PF00342 Phosphoglucose isomerase AT984_RS14830 PF00923 Transaldolase/Fructose-6-phosphate aldolase AT984_RS14835 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AT984_RS14835 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AT984_RS14840 PF01380 SIS domain AT984_RS14840 PF01418 Helix-turn-helix domain, rpiR family AT984_RS14840 PF02685 Glucokinase AT984_RS14860 PF02470 MlaD protein AT984_RS14865 PF02405 Permease MlaE AT984_RS14870 PF00005 ABC transporter AT984_RS14875 PF07963 Prokaryotic N-terminal methylation motif AT984_RS14875 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AT984_RS14900 PF05567 Neisseria PilC beta-propeller domain AT984_RS14905 PF07992 Pyridine nucleotide-disulphide oxidoreductase AT984_RS14905 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AT984_RS14910 PF00310 Glutamine amidotransferases class-II AT984_RS14910 PF04898 Glutamate synthase central domain AT984_RS14910 PF01645 Conserved region in glutamate synthase AT984_RS14910 PF01493 GXGXG motif AT984_RS14920 PF13286 Phosphohydrolase-associated domain AT984_RS14920 PF01966 HD domain AT984_RS14925 PF13683 Integrase core domain AT984_RS14925 PF13276 HTH-like domain AT984_RS14930 PF01527 Transposase AT984_RS14935 PF01695 IstB-like ATP binding protein AT984_RS14940 PF00665 Integrase core domain AT984_RS14945 PF01761 3-dehydroquinate synthase AT984_RS14950 PF01202 Shikimate kinase AT984_RS14960 PF11741 AMIN domain AT984_RS14960 PF00263 Bacterial type II and III secretion system protein AT984_RS14960 PF07660 Secretin and TonB N terminus short domain AT984_RS14960 PF03958 Bacterial type II/III secretion system short domain AT984_RS14975 PF05137 Fimbrial assembly protein (PilN) AT984_RS14980 PF11104 Type IV pilus assembly protein PilM; AT984_RS14985 PF00912 Transglycosylase AT984_RS14985 PF00905 Penicillin binding protein transpeptidase domain AT984_RS14985 PF17092 Penicillin-binding protein OB-like domain AT984_RS14990 PF01491 Frataxin-like domain AT984_RS14995 PF00005 ABC transporter AT984_RS14995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AT984_RS15000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AT984_RS15000 PF00005 ABC transporter AT984_RS15005 PF12911 N-terminal TM domain of oligopeptide transport permease C AT984_RS15005 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS15010 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS15025 PF13609 Gram-negative porin AT984_RS15030 PF13609 Gram-negative porin AT984_RS15035 PF03232 Ubiquinone biosynthesis protein COQ7 AT984_RS15040 PF02566 OsmC-like protein AT984_RS15045 PF00291 Pyridoxal-phosphate dependent enzyme AT984_RS15045 PF00585 C-terminal regulatory domain of Threonine dehydratase AT984_RS15050 PF02277 Phosphoribosyltransferase AT984_RS15060 PF08334 Type II secretion system (T2SS), protein G AT984_RS15060 PF07963 Prokaryotic N-terminal methylation motif AT984_RS15070 PF07963 Prokaryotic N-terminal methylation motif AT984_RS15070 PF02501 Type II secretion system (T2SS), protein I AT984_RS15100 PF00263 Bacterial type II and III secretion system protein AT984_RS15100 PF03958 Bacterial type II/III secretion system short domain AT984_RS15105 PF00437 Type II/IV secretion system protein AT984_RS15110 PF00482 Type II secretion system (T2SS), protein F AT984_RS15120 PF14685 Tricorn protease PDZ domain AT984_RS15120 PF14684 Tricorn protease C1 domain AT984_RS15120 PF03572 Peptidase family S41 AT984_RS15120 PF07676 WD40-like Beta Propeller Repeat AT984_RS15125 PF01479 S4 domain AT984_RS15125 PF00579 tRNA synthetases class I (W and Y) AT984_RS15130 PF08460 Bacterial SH3 domain AT984_RS15130 PF01551 Peptidase family M23 AT984_RS15135 PF03702 Anhydro-N-acetylmuramic acid kinase AT984_RS15140 PF01521 Iron-sulphur cluster biosynthesis AT984_RS15145 PF00380 Ribosomal protein S9/S16 AT984_RS15150 PF00572 Ribosomal protein L13 AT984_RS15165 PF01636 Phosphotransferase enzyme family AT984_RS15170 PF08479 POTRA domain, ShlB-type AT984_RS15170 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AT984_RS15175 PF05860 haemagglutination activity domain AT984_RS15180 PF13426 PAS domain AT984_RS15180 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS15180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS15180 PF00672 HAMP domain AT984_RS15185 PF00072 Response regulator receiver domain AT984_RS15185 PF00486 Transcriptional regulatory protein, C terminal AT984_RS15190 PF00183 Hsp90 protein AT984_RS15190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS15200 PF00793 DAHP synthetase I family AT984_RS15205 PF01523 Putative modulator of DNA gyrase AT984_RS15210 PF03466 LysR substrate binding domain AT984_RS15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS15225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AT984_RS15230 PF02021 Uncharacterised protein family UPF0102 AT984_RS15235 PF13580 SIS domain AT984_RS15240 PF04972 BON domain AT984_RS15245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AT984_RS15245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AT984_RS15250 PF00437 Type II/IV secretion system protein AT984_RS15255 PF00437 Type II/IV secretion system protein AT984_RS15260 PF01168 Alanine racemase, N-terminal domain AT984_RS15275 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AT984_RS15275 PF00034 Cytochrome c AT984_RS15275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AT984_RS15280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS15280 PF00672 HAMP domain AT984_RS15280 PF02203 Tar ligand binding domain homologue AT984_RS15300 PF01926 50S ribosome-binding GTPase AT984_RS15325 PF13411 MerR HTH family regulatory protein AT984_RS15330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS15330 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS15330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS15335 PF00108 Thiolase, N-terminal domain AT984_RS15335 PF02803 Thiolase, C-terminal domain AT984_RS15340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AT984_RS15340 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS15340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AT984_RS15360 PF06167 Glucose-regulated metallo-peptidase M90 AT984_RS15365 PF00571 CBS domain AT984_RS15365 PF00478 IMP dehydrogenase / GMP reductase domain AT984_RS15370 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS15385 PF03831 PhnA domain AT984_RS15385 PF08274 PhnA Zinc-Ribbon AT984_RS15390 PF01037 Lrp/AsnC ligand binding domain AT984_RS15400 PF00563 EAL domain AT984_RS15400 PF03707 Bacterial signalling protein N terminal repeat AT984_RS15400 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS15410 PF00582 Universal stress protein family AT984_RS15425 PF13520 Amino acid permease AT984_RS15430 PF07715 TonB-dependent Receptor Plug Domain AT984_RS15430 PF00593 TonB dependent receptor AT984_RS15435 PF05922 Peptidase inhibitor I9 AT984_RS15435 PF00082 Subtilase family AT984_RS15445 PF00850 Histone deacetylase domain AT984_RS15450 PF00583 Acetyltransferase (GNAT) family AT984_RS15450 PF13380 CoA binding domain AT984_RS15450 PF13607 Succinyl-CoA ligase like flavodoxin domain AT984_RS15465 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS15470 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS15475 PF00005 ABC transporter AT984_RS15475 PF12857 TOBE-like domain AT984_RS15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS15480 PF03466 LysR substrate binding domain AT984_RS15495 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AT984_RS15505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AT984_RS15510 PF01292 Prokaryotic cytochrome b561 AT984_RS15530 PF07715 TonB-dependent Receptor Plug Domain AT984_RS15530 PF00593 TonB dependent receptor AT984_RS15540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS15540 PF00672 HAMP domain AT984_RS15540 PF02203 Tar ligand binding domain homologue AT984_RS15545 PF02867 Ribonucleotide reductase, barrel domain AT984_RS15545 PF00317 Ribonucleotide reductase, all-alpha domain AT984_RS15545 PF03477 ATP cone domain AT984_RS15555 PF07238 PilZ domain AT984_RS15560 PF00561 alpha/beta hydrolase fold AT984_RS15565 PF01568 Molydopterin dinucleotide binding domain AT984_RS15565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AT984_RS15565 PF00384 Molybdopterin oxidoreductase AT984_RS15570 PF00313 'Cold-shock' DNA-binding domain AT984_RS15580 PF02321 Outer membrane efflux protein AT984_RS15585 PF00873 AcrB/AcrD/AcrF family AT984_RS15590 PF00529 HlyD membrane-fusion protein of T1SS AT984_RS15590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS15595 PF08361 MAATS-type transcriptional repressor, C-terminal region AT984_RS15595 PF00440 Bacterial regulatory proteins, tetR family AT984_RS15600 PF08497 Radical SAM N-terminal AT984_RS15600 PF11842 Domain of unknown function (DUF3362) AT984_RS15600 PF04055 Radical SAM superfamily AT984_RS15615 PF00563 EAL domain AT984_RS15615 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS15615 PF03707 Bacterial signalling protein N terminal repeat AT984_RS15620 PF05957 Bacterial protein of unknown function (DUF883) AT984_RS15625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AT984_RS15625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AT984_RS15630 PF00365 Phosphofructokinase AT984_RS15645 PF01738 Dienelactone hydrolase family AT984_RS15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS15650 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS15650 PF00497 Bacterial extracellular solute-binding proteins, family 3 AT984_RS15655 PF00682 HMGL-like AT984_RS15660 PF02785 Biotin carboxylase C-terminal domain AT984_RS15660 PF00289 Biotin carboxylase, N-terminal domain AT984_RS15660 PF18140 Propionyl-coenzyme A carboxylase BT domain AT984_RS15660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AT984_RS15660 PF00364 Biotin-requiring enzyme AT984_RS15670 PF04055 Radical SAM superfamily AT984_RS15670 PF06968 Biotin and Thiamin Synthesis associated domain AT984_RS15680 PF00155 Aminotransferase class I and II AT984_RS15685 PF00202 Aminotransferase class-III AT984_RS15690 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS15700 PF01039 Carboxyl transferase domain AT984_RS15710 PF00111 2Fe-2S iron-sulfur cluster binding domain AT984_RS15710 PF01799 [2Fe-2S] binding domain AT984_RS15715 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AT984_RS15725 PF00403 Heavy-metal-associated domain AT984_RS15730 PF00376 MerR family regulatory protein AT984_RS15730 PF09278 MerR, DNA binding AT984_RS15735 PF00657 GDSL-like Lipase/Acylhydrolase AT984_RS15735 PF03797 Autotransporter beta-domain AT984_RS15740 PF01022 Bacterial regulatory protein, arsR family AT984_RS15745 PF00529 HlyD membrane-fusion protein of T1SS AT984_RS15745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS15750 PF00873 AcrB/AcrD/AcrF family AT984_RS15760 PF05726 Pirin C-terminal cupin domain AT984_RS15760 PF02678 Pirin AT984_RS15765 PF01964 Radical SAM ThiC family AT984_RS15765 PF13667 ThiC-associated domain AT984_RS15770 PF01266 FAD dependent oxidoreductase AT984_RS15780 PF05690 Thiazole biosynthesis protein ThiG AT984_RS15785 PF08543 Phosphomethylpyrimidine kinase AT984_RS15800 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AT984_RS15800 PF08479 POTRA domain, ShlB-type AT984_RS15805 PF00072 Response regulator receiver domain AT984_RS15810 PF00072 Response regulator receiver domain AT984_RS15810 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS15810 PF09308 LuxQ, periplasmic AT984_RS15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS15815 PF13411 MerR HTH family regulatory protein AT984_RS15840 PF05746 DALR anticodon binding domain AT984_RS15840 PF02092 Glycyl-tRNA synthetase beta subunit AT984_RS15845 PF02091 Glycyl-tRNA synthetase alpha subunit AT984_RS15850 PF00795 Carbon-nitrogen hydrolase AT984_RS15855 PF03471 Transporter associated domain AT984_RS15855 PF00571 CBS domain AT984_RS15860 PF02492 CobW/HypB/UreG, nucleotide-binding domain AT984_RS15860 PF07683 Cobalamin synthesis protein cobW C-terminal domain AT984_RS15870 PF01258 Prokaryotic dksA/traR C4-type zinc finger AT984_RS15880 PF00227 Proteasome subunit AT984_RS15885 PF07724 AAA domain (Cdc48 subfamily) AT984_RS15885 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS15895 PF03309 Type III pantothenate kinase AT984_RS15900 PF02203 Tar ligand binding domain homologue AT984_RS15900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS15900 PF00672 HAMP domain AT984_RS15905 PF01740 STAS domain AT984_RS15905 PF00916 Sulfate permease family AT984_RS15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS15920 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS15925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AT984_RS15930 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AT984_RS15935 PF03480 Bacterial extracellular solute-binding protein, family 7 AT984_RS15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS15940 PF00989 PAS fold AT984_RS15940 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS15945 PF00072 Response regulator receiver domain AT984_RS15945 PF00196 Bacterial regulatory proteins, luxR family AT984_RS15950 PF00300 Histidine phosphatase superfamily (branch 1) AT984_RS15960 PF01642 Methylmalonyl-CoA mutase AT984_RS15960 PF02310 B12 binding domain AT984_RS15970 PF06100 MCRA family AT984_RS15980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS15980 PF03466 LysR substrate binding domain AT984_RS15985 PF00361 Proton-conducting membrane transporter AT984_RS15985 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AT984_RS15990 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AT984_RS16040 PF00593 TonB dependent receptor AT984_RS16040 PF07715 TonB-dependent Receptor Plug Domain AT984_RS16050 PF00486 Transcriptional regulatory protein, C terminal AT984_RS16050 PF00072 Response regulator receiver domain AT984_RS16055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16055 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS16065 PF01048 Phosphorylase superfamily AT984_RS16065 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AT984_RS16070 PF08448 PAS fold AT984_RS16070 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS16075 PF13673 Acetyltransferase (GNAT) domain AT984_RS16080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AT984_RS16080 PF00072 Response regulator receiver domain AT984_RS16080 PF01627 Hpt domain AT984_RS16080 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS16080 PF00672 HAMP domain AT984_RS16085 PF13609 Gram-negative porin AT984_RS16090 PF04116 Fatty acid hydroxylase superfamily AT984_RS16095 PF00300 Histidine phosphatase superfamily (branch 1) AT984_RS16105 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS16105 PF03707 Bacterial signalling protein N terminal repeat AT984_RS16105 PF00563 EAL domain AT984_RS16115 PF02803 Thiolase, C-terminal domain AT984_RS16115 PF00108 Thiolase, N-terminal domain AT984_RS16120 PF09339 IclR helix-turn-helix domain AT984_RS16120 PF01614 Bacterial transcriptional regulator AT984_RS16125 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AT984_RS16125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AT984_RS16125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AT984_RS16130 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS16135 PF10531 SLBB domain AT984_RS16135 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AT984_RS16135 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AT984_RS16140 PF01568 Molydopterin dinucleotide binding domain AT984_RS16140 PF00384 Molybdopterin oxidoreductase AT984_RS16140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AT984_RS16160 PF03992 Antibiotic biosynthesis monooxygenase AT984_RS16165 PF00892 EamA-like transporter family AT984_RS16180 PF00216 Bacterial DNA-binding protein AT984_RS16185 PF08448 PAS fold AT984_RS16185 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS16185 PF08447 PAS fold AT984_RS16185 PF00563 EAL domain AT984_RS16195 PF00171 Aldehyde dehydrogenase family AT984_RS16215 PF00885 6,7-dimethyl-8-ribityllumazine synthase AT984_RS16230 PF08546 Ketopantoate reductase PanE/ApbA C terminal AT984_RS16230 PF02558 Ketopantoate reductase PanE/ApbA AT984_RS16235 PF02515 CoA-transferase family III AT984_RS16240 PF06580 Histidine kinase AT984_RS16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16240 PF07694 5TMR of 5TMR-LYT AT984_RS16245 PF04397 LytTr DNA-binding domain AT984_RS16245 PF00072 Response regulator receiver domain AT984_RS16260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AT984_RS16265 PF08439 Oligopeptidase F AT984_RS16265 PF01432 Peptidase family M3 AT984_RS16275 PF00565 Staphylococcal nuclease homologue AT984_RS16285 PF13361 UvrD-like helicase C-terminal domain AT984_RS16285 PF00580 UvrD/REP helicase N-terminal domain AT984_RS16290 PF00689 Cation transporting ATPase, C-terminus AT984_RS16290 PF00690 Cation transporter/ATPase, N-terminus AT984_RS16295 PF00149 Calcineurin-like phosphoesterase AT984_RS16320 PF00158 Sigma-54 interaction domain AT984_RS16320 PF02954 Bacterial regulatory protein, Fis family AT984_RS16320 PF00072 Response regulator receiver domain AT984_RS16325 PF00989 PAS fold AT984_RS16325 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS16325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16325 PF00672 HAMP domain AT984_RS16335 PF01029 NusB family AT984_RS16335 PF01189 16S rRNA methyltransferase RsmB/F AT984_RS16340 PF01227 GTP cyclohydrolase I AT984_RS16355 PF06508 Queuosine biosynthesis protein QueC AT984_RS16365 PF00171 Aldehyde dehydrogenase family AT984_RS16375 PF01527 Transposase AT984_RS16380 PF13276 HTH-like domain AT984_RS16380 PF13683 Integrase core domain AT984_RS16385 PF00072 Response regulator receiver domain AT984_RS16385 PF04397 LytTr DNA-binding domain AT984_RS16390 PF07694 5TMR of 5TMR-LYT AT984_RS16390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16390 PF06580 Histidine kinase AT984_RS16405 PF00675 Insulinase (Peptidase family M16) AT984_RS16405 PF05193 Peptidase M16 inactive domain AT984_RS16415 PF01435 Peptidase family M48 AT984_RS16425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16425 PF00672 HAMP domain AT984_RS16425 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS16425 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AT984_RS16425 PF01627 Hpt domain AT984_RS16425 PF00072 Response regulator receiver domain AT984_RS16430 PF01751 Toprim domain AT984_RS16430 PF01131 DNA topoisomerase AT984_RS16440 PF03099 Biotin/lipoate A/B protein ligase family AT984_RS16440 PF02237 Biotin protein ligase C terminal domain AT984_RS16440 PF08279 HTH domain AT984_RS16450 PF04151 Bacterial pre-peptidase C-terminal domain AT984_RS16450 PF00082 Subtilase family AT984_RS16455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AT984_RS16455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AT984_RS16465 PF00456 Transketolase, thiamine diphosphate binding domain AT984_RS16465 PF02779 Transketolase, pyrimidine binding domain AT984_RS16465 PF02780 Transketolase, C-terminal domain AT984_RS16475 PF00072 Response regulator receiver domain AT984_RS16475 PF00158 Sigma-54 interaction domain AT984_RS16475 PF02954 Bacterial regulatory protein, Fis family AT984_RS16480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16480 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS16480 PF00497 Bacterial extracellular solute-binding proteins, family 3 AT984_RS16485 PF00483 Nucleotidyl transferase AT984_RS16490 PF00360 Phytochrome region AT984_RS16490 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS16490 PF00563 EAL domain AT984_RS16490 PF01590 GAF domain AT984_RS16495 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS16505 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS16510 PF00248 Aldo/keto reductase family AT984_RS16515 PF09423 PhoD-like phosphatase AT984_RS16515 PF16655 PhoD-like phosphatase, N-terminal domain AT984_RS16520 PF01494 FAD binding domain AT984_RS16535 PF00795 Carbon-nitrogen hydrolase AT984_RS16545 PF03710 Glutamate-ammonia ligase adenylyltransferase AT984_RS16545 PF08335 GlnD PII-uridylyltransferase AT984_RS16565 PF13417 Glutathione S-transferase, N-terminal domain AT984_RS16565 PF14497 Glutathione S-transferase, C-terminal domain AT984_RS16570 PF05818 Enterobacterial TraT complement resistance protein AT984_RS16585 PF00005 ABC transporter AT984_RS16595 PF12729 Four helix bundle sensory module for signal transduction AT984_RS16595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS16595 PF00672 HAMP domain AT984_RS16600 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AT984_RS16605 PF01544 CorA-like Mg2+ transporter protein AT984_RS16610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AT984_RS16615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AT984_RS16620 PF02603 HPr Serine kinase N terminus AT984_RS16620 PF07475 HPr Serine kinase C-terminal domain AT984_RS16625 PF01475 Ferric uptake regulator family AT984_RS16630 PF04355 SmpA / OmlA family AT984_RS16635 PF05173 Dihydrodipicolinate reductase, C-terminus AT984_RS16635 PF01113 Dihydrodipicolinate reductase, N-terminus AT984_RS16640 PF01618 MotA/TolQ/ExbB proton channel family AT984_RS16645 PF02472 Biopolymer transport protein ExbD/TolR AT984_RS16650 PF09334 tRNA synthetases class I (M) AT984_RS16650 PF13603 Leucyl-tRNA synthetase, Domain 2 AT984_RS16650 PF00133 tRNA synthetases class I (I, L, M and V) AT984_RS16650 PF08264 Anticodon-binding domain of tRNA AT984_RS16665 PF00563 EAL domain AT984_RS16665 PF03707 Bacterial signalling protein N terminal repeat AT984_RS16665 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS16670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AT984_RS16675 PF02464 Competence-damaged protein AT984_RS16680 PF04608 Phosphatidylglycerophosphatase A AT984_RS16685 PF00586 AIR synthase related protein, N-terminal domain AT984_RS16685 PF02769 AIR synthase related protein, C-terminal domain AT984_RS16695 PF00072 Response regulator receiver domain AT984_RS16695 PF00196 Bacterial regulatory proteins, luxR family AT984_RS16700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16700 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS16700 PF00989 PAS fold AT984_RS16705 PF01515 Phosphate acetyl/butaryl transferase AT984_RS16705 PF00390 Malic enzyme, N-terminal domain AT984_RS16705 PF03949 Malic enzyme, NAD binding domain AT984_RS16715 PF00398 Ribosomal RNA adenine dimethylase AT984_RS16720 PF09312 SurA N-terminal domain AT984_RS16720 PF00639 PPIC-type PPIASE domain AT984_RS16725 PF04453 LPS transport system D AT984_RS16730 PF01636 Phosphotransferase enzyme family AT984_RS16735 PF01546 Peptidase family M20/M25/M40 AT984_RS16740 PF12697 Alpha/beta hydrolase family AT984_RS16745 PF00378 Enoyl-CoA hydratase/isomerase AT984_RS16760 PF02798 Glutathione S-transferase, N-terminal domain AT984_RS16765 PF00043 Glutathione S-transferase, C-terminal domain AT984_RS16765 PF02798 Glutathione S-transferase, N-terminal domain AT984_RS16770 PF02627 Carboxymuconolactone decarboxylase family AT984_RS16800 PF07021 Methionine biosynthesis protein MetW AT984_RS16800 PF00561 alpha/beta hydrolase fold AT984_RS16805 PF00561 alpha/beta hydrolase fold AT984_RS16815 PF01343 Peptidase family S49 AT984_RS16820 PF01645 Conserved region in glutamate synthase AT984_RS16835 PF00043 Glutathione S-transferase, C-terminal domain AT984_RS16835 PF13417 Glutathione S-transferase, N-terminal domain AT984_RS16840 PF13302 Acetyltransferase (GNAT) domain AT984_RS16845 PF00005 ABC transporter AT984_RS16850 PF12704 MacB-like periplasmic core domain AT984_RS16850 PF02687 FtsX-like permease family AT984_RS16855 PF13533 Biotin-lipoyl like AT984_RS16880 PF08328 Adenylosuccinate lyase C-terminal AT984_RS16880 PF00206 Lyase AT984_RS16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16890 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS16890 PF00672 HAMP domain AT984_RS16895 PF00486 Transcriptional regulatory protein, C terminal AT984_RS16895 PF00072 Response regulator receiver domain AT984_RS16900 PF13302 Acetyltransferase (GNAT) domain AT984_RS16905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AT984_RS16910 PF00072 Response regulator receiver domain AT984_RS16910 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS16910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16910 PF01627 Hpt domain AT984_RS16910 PF00672 HAMP domain AT984_RS16910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AT984_RS16920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS16920 PF08269 Cache domain AT984_RS16930 PF02203 Tar ligand binding domain homologue AT984_RS16930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS16930 PF00672 HAMP domain AT984_RS16950 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AT984_RS16950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AT984_RS16950 PF00034 Cytochrome c AT984_RS16955 PF01799 [2Fe-2S] binding domain AT984_RS16955 PF00111 2Fe-2S iron-sulfur cluster binding domain AT984_RS16970 PF00246 Zinc carboxypeptidase AT984_RS16975 PF04397 LytTr DNA-binding domain AT984_RS16975 PF00072 Response regulator receiver domain AT984_RS16980 PF06580 Histidine kinase AT984_RS16980 PF02743 Cache domain AT984_RS16980 PF00672 HAMP domain AT984_RS16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS16985 PF13230 Glutamine amidotransferases class-II AT984_RS16990 PF01266 FAD dependent oxidoreductase AT984_RS16995 PF07715 TonB-dependent Receptor Plug Domain AT984_RS16995 PF00593 TonB dependent receptor AT984_RS17000 PF00593 TonB dependent receptor AT984_RS17000 PF07715 TonB-dependent Receptor Plug Domain AT984_RS17010 PF01274 Malate synthase AT984_RS17015 PF03466 LysR substrate binding domain AT984_RS17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS17020 PF03707 Bacterial signalling protein N terminal repeat AT984_RS17020 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS17020 PF00563 EAL domain AT984_RS17025 PF01339 CheB methylesterase AT984_RS17025 PF01739 CheR methyltransferase, SAM binding domain AT984_RS17025 PF03705 CheR methyltransferase, all-alpha domain AT984_RS17025 PF08448 PAS fold AT984_RS17035 PF03793 PASTA domain AT984_RS17035 PF00069 Protein kinase domain AT984_RS17040 PF05746 DALR anticodon binding domain AT984_RS17040 PF00750 tRNA synthetases class I (R) AT984_RS17040 PF03485 Arginyl tRNA synthetase N terminal domain AT984_RS17050 PF13462 Thioredoxin AT984_RS17060 PF00005 ABC transporter AT984_RS17065 PF04552 Sigma-54, DNA binding domain AT984_RS17065 PF04963 Sigma-54 factor, core binding domain AT984_RS17065 PF00309 Sigma-54 factor, Activator interacting domain (AID) AT984_RS17070 PF00563 EAL domain AT984_RS17070 PF03707 Bacterial signalling protein N terminal repeat AT984_RS17070 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS17075 PF01170 Putative RNA methylase family UPF0020 AT984_RS17075 PF02926 THUMP domain AT984_RS17080 PF04452 RNA methyltransferase AT984_RS17090 PF00501 AMP-binding enzyme AT984_RS17090 PF13193 AMP-binding enzyme C-terminal domain AT984_RS17095 PF02233 NAD(P) transhydrogenase beta subunit AT984_RS17100 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AT984_RS17105 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AT984_RS17105 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AT984_RS17120 PF07730 Histidine kinase AT984_RS17125 PF00072 Response regulator receiver domain AT984_RS17125 PF00196 Bacterial regulatory proteins, luxR family AT984_RS17135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS17140 PF00005 ABC transporter AT984_RS17150 PF12704 MacB-like periplasmic core domain AT984_RS17150 PF02687 FtsX-like permease family AT984_RS17180 PF08334 Type II secretion system (T2SS), protein G AT984_RS17180 PF07963 Prokaryotic N-terminal methylation motif AT984_RS17185 PF08334 Type II secretion system (T2SS), protein G AT984_RS17185 PF07963 Prokaryotic N-terminal methylation motif AT984_RS17190 PF00263 Bacterial type II and III secretion system protein AT984_RS17190 PF03958 Bacterial type II/III secretion system short domain AT984_RS17210 PF00437 Type II/IV secretion system protein AT984_RS17215 PF00482 Type II secretion system (T2SS), protein F AT984_RS17220 PF07963 Prokaryotic N-terminal methylation motif AT984_RS17220 PF08334 Type II secretion system (T2SS), protein G AT984_RS17235 PF00436 Single-strand binding protein family AT984_RS17245 PF16124 RecQ zinc-binding AT984_RS17245 PF00570 HRDC domain AT984_RS17245 PF00271 Helicase conserved C-terminal domain AT984_RS17245 PF00270 DEAD/DEAH box helicase AT984_RS17245 PF09382 RQC domain AT984_RS17265 PF00005 ABC transporter AT984_RS17300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS17300 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS17300 PF08448 PAS fold AT984_RS17300 PF00072 Response regulator receiver domain AT984_RS17300 PF13188 PAS domain AT984_RS17305 PF17755 UvrA DNA-binding domain AT984_RS17305 PF17760 UvrA interaction domain AT984_RS17315 PF00072 Response regulator receiver domain AT984_RS17325 PF01070 FMN-dependent dehydrogenase AT984_RS17330 PF13640 2OG-Fe(II) oxygenase superfamily AT984_RS17330 PF18331 PKHD-type hydroxylase C-terminal domain AT984_RS17335 PF00593 TonB dependent receptor AT984_RS17335 PF07660 Secretin and TonB N terminus short domain AT984_RS17335 PF07715 TonB-dependent Receptor Plug Domain AT984_RS17340 PF02472 Biopolymer transport protein ExbD/TolR AT984_RS17345 PF01618 MotA/TolQ/ExbB proton channel family AT984_RS17355 PF03741 Integral membrane protein TerC family AT984_RS17360 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AT984_RS17365 PF01435 Peptidase family M48 AT984_RS17370 PF01967 MoaC family AT984_RS17375 PF04932 O-Antigen ligase AT984_RS17375 PF15864 Protein glycosylation ligase AT984_RS17375 PF11846 Virulence factor membrane-bound polymerase, C-terminal AT984_RS17385 PF00005 ABC transporter AT984_RS17395 PF01613 Flavin reductase like domain AT984_RS17400 PF01435 Peptidase family M48 AT984_RS17405 PF13545 Crp-like helix-turn-helix domain AT984_RS17405 PF00027 Cyclic nucleotide-binding domain AT984_RS17415 PF00854 POT family AT984_RS17420 PF00596 Class II Aldolase and Adducin N-terminal domain AT984_RS17430 PF00171 Aldehyde dehydrogenase family AT984_RS17435 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AT984_RS17435 PF12833 Helix-turn-helix domain AT984_RS17440 PF07969 Amidohydrolase family AT984_RS17445 PF03960 ArsC family AT984_RS17460 PF00106 short chain dehydrogenase AT984_RS17500 PF00144 Beta-lactamase AT984_RS17505 PF03372 Endonuclease/Exonuclease/phosphatase family AT984_RS17510 PF07715 TonB-dependent Receptor Plug Domain AT984_RS17510 PF00593 TonB dependent receptor AT984_RS17515 PF00156 Phosphoribosyl transferase domain AT984_RS17525 PF02637 GatB domain AT984_RS17525 PF02934 GatB/GatE catalytic domain AT984_RS17530 PF01425 Amidase AT984_RS17535 PF02686 Glu-tRNAGln amidotransferase C subunit AT984_RS17555 PF03717 Penicillin-binding Protein dimerisation domain AT984_RS17555 PF00905 Penicillin binding protein transpeptidase domain AT984_RS17560 PF01098 Cell cycle protein AT984_RS17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS17565 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS17570 PF00072 Response regulator receiver domain AT984_RS17570 PF00486 Transcriptional regulatory protein, C terminal AT984_RS17575 PF00154 recA bacterial DNA recombination protein AT984_RS17585 PF02631 RecX family AT984_RS17595 PF08442 ATP-grasp domain AT984_RS17595 PF00549 CoA-ligase AT984_RS17600 PF02629 CoA binding domain AT984_RS17600 PF00549 CoA-ligase AT984_RS17605 PF03741 Integral membrane protein TerC family AT984_RS17610 PF00069 Protein kinase domain AT984_RS17610 PF03793 PASTA domain AT984_RS17620 PF16697 Inner membrane component of T3SS, cytoplasmic domain AT984_RS17625 PF00360 Phytochrome region AT984_RS17625 PF01590 GAF domain AT984_RS17625 PF00563 EAL domain AT984_RS17625 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS17635 PF01925 Sulfite exporter TauE/SafE AT984_RS17660 PF12419 SNF2 Helicase protein AT984_RS17660 PF00271 Helicase conserved C-terminal domain AT984_RS17660 PF00176 SNF2 family N-terminal domain AT984_RS17670 PF02789 Cytosol aminopeptidase family, N-terminal domain AT984_RS17670 PF00883 Cytosol aminopeptidase family, catalytic domain AT984_RS17675 PF05199 GMC oxidoreductase AT984_RS17675 PF00732 GMC oxidoreductase AT984_RS17680 PF01914 MarC family integral membrane protein AT984_RS17695 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AT984_RS17705 PF00106 short chain dehydrogenase AT984_RS17720 PF00571 CBS domain AT984_RS17720 PF01380 SIS domain AT984_RS17730 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AT984_RS17730 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AT984_RS17755 PF01494 FAD binding domain AT984_RS17760 PF12704 MacB-like periplasmic core domain AT984_RS17760 PF02687 FtsX-like permease family AT984_RS17760 PF00005 ABC transporter AT984_RS17765 PF12704 MacB-like periplasmic core domain AT984_RS17765 PF02687 FtsX-like permease family AT984_RS17765 PF00005 ABC transporter AT984_RS17770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS17775 PF13302 Acetyltransferase (GNAT) domain AT984_RS17780 PF00999 Sodium/hydrogen exchanger family AT984_RS17780 PF02080 TrkA-C domain AT984_RS17780 PF02254 TrkA-N domain AT984_RS17785 PF01740 STAS domain AT984_RS17785 PF00916 Sulfate permease family AT984_RS17790 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS17790 PF17158 Membrane-associated sensor, integral membrane domain AT984_RS17795 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS17795 PF07694 5TMR of 5TMR-LYT AT984_RS17800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AT984_RS17800 PF00005 ABC transporter AT984_RS17805 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS17810 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS17820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AT984_RS17825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AT984_RS17830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AT984_RS17840 PF04304 Protein of unknown function (DUF454) AT984_RS17855 PF07963 Prokaryotic N-terminal methylation motif AT984_RS17855 PF00114 Pilin (bacterial filament) AT984_RS17860 PF00114 Pilin (bacterial filament) AT984_RS17860 PF07963 Prokaryotic N-terminal methylation motif AT984_RS17865 PF00114 Pilin (bacterial filament) AT984_RS17865 PF07963 Prokaryotic N-terminal methylation motif AT984_RS17870 PF12706 Beta-lactamase superfamily domain AT984_RS17880 PF00271 Helicase conserved C-terminal domain AT984_RS17880 PF12419 SNF2 Helicase protein AT984_RS17880 PF00176 SNF2 family N-terminal domain AT984_RS17885 PF01593 Flavin containing amine oxidoreductase AT984_RS17895 PF00849 RNA pseudouridylate synthase AT984_RS17905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AT984_RS17910 PF00581 Rhodanese-like domain AT984_RS17910 PF17773 UPF0176 acylphosphatase like domain AT984_RS17915 PF00266 Aminotransferase class-V AT984_RS17920 PF02666 Phosphatidylserine decarboxylase AT984_RS17925 PF03466 LysR substrate binding domain AT984_RS17925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS17930 PF00248 Aldo/keto reductase family AT984_RS17935 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS17935 PF03707 Bacterial signalling protein N terminal repeat AT984_RS17935 PF00563 EAL domain AT984_RS17940 PF00579 tRNA synthetases class I (W and Y) AT984_RS17945 PF00501 AMP-binding enzyme AT984_RS17980 PF04262 Glutamate-cysteine ligase AT984_RS17985 PF02770 Acyl-CoA dehydrogenase, middle domain AT984_RS17985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AT984_RS17985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AT984_RS17990 PF01590 GAF domain AT984_RS17990 PF00360 Phytochrome region AT984_RS17990 PF00563 EAL domain AT984_RS17990 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS17995 PF00156 Phosphoribosyl transferase domain AT984_RS18010 PF10396 GTP-binding protein TrmE N-terminus AT984_RS18010 PF12631 MnmE helical domain AT984_RS18010 PF01926 50S ribosome-binding GTPase AT984_RS18025 PF03793 PASTA domain AT984_RS18025 PF00069 Protein kinase domain AT984_RS18040 PF02096 60Kd inner membrane protein AT984_RS18040 PF14849 YidC periplasmic domain AT984_RS18045 PF01809 Putative membrane protein insertion efficiency factor AT984_RS18055 PF11638 DnaA N-terminal domain AT984_RS18055 PF00308 Bacterial dnaA protein AT984_RS18055 PF08299 Bacterial dnaA protein helix-turn-helix AT984_RS18060 PF02768 DNA polymerase III beta subunit, C-terminal domain AT984_RS18060 PF00712 DNA polymerase III beta subunit, N-terminal domain AT984_RS18060 PF02767 DNA polymerase III beta subunit, central domain AT984_RS18065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS18065 PF01751 Toprim domain AT984_RS18065 PF18053 DNA gyrase B subunit insert domain AT984_RS18065 PF00204 DNA gyrase B AT984_RS18065 PF00986 DNA gyrase B subunit, carboxyl terminus AT984_RS18070 PF00665 Integrase core domain AT984_RS18075 PF01695 IstB-like ATP binding protein AT984_RS18080 PF13276 HTH-like domain AT984_RS18080 PF00665 Integrase core domain AT984_RS18080 PF13333 Integrase core domain AT984_RS18085 PF01527 Transposase AT984_RS18095 PF13276 HTH-like domain AT984_RS18095 PF01527 Transposase AT984_RS18095 PF13333 Integrase core domain AT984_RS18095 PF00665 Integrase core domain AT984_RS18105 PF00665 Integrase core domain AT984_RS18110 PF01695 IstB-like ATP binding protein AT984_RS18120 PF13683 Integrase core domain AT984_RS18120 PF13276 HTH-like domain AT984_RS18125 PF01527 Transposase AT984_RS18145 PF12849 PBP superfamily domain AT984_RS18155 PF01161 Phosphatidylethanolamine-binding protein AT984_RS18175 PF00005 ABC transporter AT984_RS18185 PF02321 Outer membrane efflux protein AT984_RS18195 PF13193 AMP-binding enzyme C-terminal domain AT984_RS18195 PF00501 AMP-binding enzyme AT984_RS18195 PF00668 Condensation domain AT984_RS18195 PF00550 Phosphopantetheine attachment site AT984_RS18195 PF00975 Thioesterase domain AT984_RS18205 PF00107 Zinc-binding dehydrogenase AT984_RS18205 PF08240 Alcohol dehydrogenase GroES-like domain AT984_RS18210 PF03466 LysR substrate binding domain AT984_RS18210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS18215 PF01447 Thermolysin metallopeptidase, catalytic domain AT984_RS18215 PF07504 Fungalysin/Thermolysin Propeptide Motif AT984_RS18215 PF02868 Thermolysin metallopeptidase, alpha-helical domain AT984_RS18215 PF03413 Peptidase propeptide and YPEB domain AT984_RS18255 PF00563 EAL domain AT984_RS18255 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS18255 PF05231 MASE1 AT984_RS18255 PF13426 PAS domain AT984_RS18255 PF08448 PAS fold AT984_RS18255 PF08447 PAS fold AT984_RS18260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS18260 PF07568 Histidine kinase AT984_RS18260 PF12282 Signal transduction histidine kinase AT984_RS18265 PF13426 PAS domain AT984_RS18265 PF00563 EAL domain AT984_RS18265 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS18300 PF04321 RmlD substrate binding domain AT984_RS18310 PF01037 Lrp/AsnC ligand binding domain AT984_RS18320 PF00085 Thioredoxin AT984_RS18335 PF04328 Selenoprotein, putative AT984_RS18340 PF13722 5TM C-terminal transporter carbon starvation CstA AT984_RS18340 PF02554 Carbon starvation protein CstA AT984_RS18345 PF02203 Tar ligand binding domain homologue AT984_RS18345 PF00672 HAMP domain AT984_RS18345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS18355 PF00072 Response regulator receiver domain AT984_RS18355 PF00196 Bacterial regulatory proteins, luxR family AT984_RS18360 PF07730 Histidine kinase AT984_RS18360 PF17200 Single Cache domain 2 AT984_RS18365 PF01355 High potential iron-sulfur protein AT984_RS18375 PF00082 Subtilase family AT984_RS18385 PF05649 Peptidase family M13 AT984_RS18385 PF01431 Peptidase family M13 AT984_RS18400 PF03918 Cytochrome C biogenesis protein AT984_RS18405 PF08534 Redoxin AT984_RS18410 PF01578 Cytochrome C assembly protein AT984_RS18410 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AT984_RS18415 PF03100 CcmE AT984_RS18425 PF01578 Cytochrome C assembly protein AT984_RS18430 PF03379 CcmB protein AT984_RS18435 PF00005 ABC transporter AT984_RS18450 PF12867 DinB superfamily AT984_RS18450 PF03781 Sulfatase-modifying factor enzyme 1 AT984_RS18455 PF10017 Histidine-specific methyltransferase, SAM-dependent AT984_RS18460 PF01242 6-pyruvoyl tetrahydropterin synthase AT984_RS18470 PF00375 Sodium:dicarboxylate symporter family AT984_RS18490 PF00929 Exonuclease AT984_RS18490 PF04851 Type III restriction enzyme, res subunit AT984_RS18490 PF13307 Helicase C-terminal domain AT984_RS18530 PF01923 Cobalamin adenosyltransferase AT984_RS18540 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AT984_RS18545 PF02913 FAD linked oxidases, C-terminal domain AT984_RS18545 PF01565 FAD binding domain AT984_RS18555 PF04293 SpoVR like protein AT984_RS18560 PF04285 Protein of unknown function (DUF444) AT984_RS18565 PF06798 PrkA serine protein kinase C-terminal domain AT984_RS18565 PF08298 PrkA AAA domain AT984_RS18570 PF02195 ParB-like nuclease domain AT984_RS18570 PF17762 HTH domain found in ParB protein AT984_RS18580 PF01118 Semialdehyde dehydrogenase, NAD binding domain AT984_RS18595 PF13614 AAA domain AT984_RS18600 PF02527 rRNA small subunit methyltransferase G AT984_RS18605 PF13932 GidA associated domain AT984_RS18605 PF01134 Glucose inhibited division protein A AT984_RS18610 PF03692 Putative zinc- or iron-chelating domain AT984_RS18620 PF00072 Response regulator receiver domain AT984_RS18625 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS18625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AT984_RS18625 PF00072 Response regulator receiver domain AT984_RS18625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS18625 PF00672 HAMP domain AT984_RS18625 PF01627 Hpt domain AT984_RS18630 PF00392 Bacterial regulatory proteins, gntR family AT984_RS18630 PF00155 Aminotransferase class I and II AT984_RS18635 PF00892 EamA-like transporter family AT984_RS18640 PF03412 Peptidase C39 family AT984_RS18640 PF00005 ABC transporter AT984_RS18640 PF00664 ABC transporter transmembrane region AT984_RS18645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS18645 PF00529 HlyD membrane-fusion protein of T1SS AT984_RS18655 PF00196 Bacterial regulatory proteins, luxR family AT984_RS18655 PF03472 Autoinducer binding domain AT984_RS18665 PF16736 Single Cache-like AT984_RS18665 PF00989 PAS fold AT984_RS18665 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS18665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS18670 PF12679 ABC-2 family transporter protein AT984_RS18675 PF00005 ABC transporter AT984_RS18690 PF00171 Aldehyde dehydrogenase family AT984_RS18690 PF01575 MaoC like domain AT984_RS18695 PF02798 Glutathione S-transferase, N-terminal domain AT984_RS18695 PF00043 Glutathione S-transferase, C-terminal domain AT984_RS18715 PF07992 Pyridine nucleotide-disulphide oxidoreductase AT984_RS18715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AT984_RS18720 PF03707 Bacterial signalling protein N terminal repeat AT984_RS18720 PF00563 EAL domain AT984_RS18720 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS18735 PF01569 PAP2 superfamily AT984_RS18740 PF00939 Sodium:sulfate symporter transmembrane region AT984_RS18745 PF03449 Transcription elongation factor, N-terminal AT984_RS18745 PF01272 Transcription elongation factor, GreA/GreB, C-term AT984_RS18755 PF01037 Lrp/AsnC ligand binding domain AT984_RS18760 PF00171 Aldehyde dehydrogenase family AT984_RS18760 PF01619 Proline dehydrogenase AT984_RS18760 PF14850 DNA-binding domain of Proline dehydrogenase AT984_RS18760 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AT984_RS18770 PF00392 Bacterial regulatory proteins, gntR family AT984_RS18770 PF00155 Aminotransferase class I and II AT984_RS18780 PF13458 Periplasmic binding protein AT984_RS18785 PF00034 Cytochrome c AT984_RS18800 PF00266 Aminotransferase class-V AT984_RS18805 PF01037 Lrp/AsnC ligand binding domain AT984_RS18810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS18810 PF00672 HAMP domain AT984_RS18810 PF02203 Tar ligand binding domain homologue AT984_RS18815 PF01925 Sulfite exporter TauE/SafE AT984_RS18820 PF00881 Nitroreductase family AT984_RS18825 PF01042 Endoribonuclease L-PSP AT984_RS18830 PF00701 Dihydrodipicolinate synthetase family AT984_RS18835 PF07859 alpha/beta hydrolase fold AT984_RS18840 PF00005 ABC transporter AT984_RS18845 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS18860 PF01557 Fumarylacetoacetate (FAA) hydrolase family AT984_RS18865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AT984_RS18865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AT984_RS18920 PF00665 Integrase core domain AT984_RS18925 PF01695 IstB-like ATP binding protein AT984_RS18945 PF13673 Acetyltransferase (GNAT) domain AT984_RS18975 PF00589 Phage integrase family AT984_RS18975 PF13495 Phage integrase, N-terminal SAM-like domain AT984_RS19000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AT984_RS19000 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AT984_RS19005 PF00701 Dihydrodipicolinate synthetase family AT984_RS19010 PF01799 [2Fe-2S] binding domain AT984_RS19010 PF00111 2Fe-2S iron-sulfur cluster binding domain AT984_RS19015 PF00941 FAD binding domain in molybdopterin dehydrogenase AT984_RS19015 PF03450 CO dehydrogenase flavoprotein C-terminal domain AT984_RS19020 PF01958 Domain of unknown function DUF108 AT984_RS19020 PF03447 Homoserine dehydrogenase, NAD binding domain AT984_RS19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS19025 PF03466 LysR substrate binding domain AT984_RS19030 PF06052 3-hydroxyanthranilic acid dioxygenase AT984_RS19040 PF02080 TrkA-C domain AT984_RS19040 PF06826 Predicted Permease Membrane Region AT984_RS19050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AT984_RS19055 PF03807 NADP oxidoreductase coenzyme F420-dependent AT984_RS19055 PF14748 Pyrroline-5-carboxylate reductase dimerisation AT984_RS19065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AT984_RS19065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AT984_RS19070 PF01040 UbiA prenyltransferase family AT984_RS19080 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS19090 PF02653 Branched-chain amino acid transport system / permease component AT984_RS19100 PF00005 ABC transporter AT984_RS19105 PF00005 ABC transporter AT984_RS19105 PF12399 Branched-chain amino acid ATP-binding cassette transporter AT984_RS19120 PF04191 Phospholipid methyltransferase AT984_RS19125 PF16658 Class II release factor RF3, C-terminal domain AT984_RS19125 PF00009 Elongation factor Tu GTP binding domain AT984_RS19125 PF03144 Elongation factor Tu domain 2 AT984_RS19130 PF00753 Metallo-beta-lactamase superfamily AT984_RS19130 PF14863 Alkyl sulfatase dimerisation AT984_RS19130 PF14864 Alkyl sulfatase C-terminal AT984_RS19155 PF13533 Biotin-lipoyl like AT984_RS19175 PF00005 ABC transporter AT984_RS19180 PF01032 FecCD transport family AT984_RS19185 PF01497 Periplasmic binding protein AT984_RS19190 PF05171 Haemin-degrading HemS.ChuX domain AT984_RS19195 PF00593 TonB dependent receptor AT984_RS19195 PF07715 TonB-dependent Receptor Plug Domain AT984_RS19200 PF00210 Ferritin-like domain AT984_RS19215 PF00141 Peroxidase AT984_RS19225 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS19225 PF00989 PAS fold AT984_RS19225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS19235 PF12833 Helix-turn-helix domain AT984_RS19235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AT984_RS19235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AT984_RS19235 PF02805 Metal binding domain of Ada AT984_RS19240 PF08447 PAS fold AT984_RS19240 PF08448 PAS fold AT984_RS19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS19245 PF03466 LysR substrate binding domain AT984_RS19245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS19250 PF02548 Ketopantoate hydroxymethyltransferase AT984_RS19255 PF02569 Pantoate-beta-alanine ligase AT984_RS19260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AT984_RS19260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AT984_RS19275 PF00005 ABC transporter AT984_RS19280 PF16325 Peptidase family U32 C-terminal domain AT984_RS19280 PF01136 Peptidase family U32 AT984_RS19285 PF00080 Copper/zinc superoxide dismutase (SODC) AT984_RS19290 PF00270 DEAD/DEAH box helicase AT984_RS19290 PF17191 RecG wedge domain AT984_RS19290 PF00271 Helicase conserved C-terminal domain AT984_RS19315 PF02547 Queuosine biosynthesis protein AT984_RS19320 PF00155 Aminotransferase class I and II AT984_RS19335 PF01266 FAD dependent oxidoreductase AT984_RS19355 PF01037 Lrp/AsnC ligand binding domain AT984_RS19360 PF01261 Xylose isomerase-like TIM barrel AT984_RS19365 PF07715 TonB-dependent Receptor Plug Domain AT984_RS19365 PF00593 TonB dependent receptor AT984_RS19370 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AT984_RS19380 PF17676 LD-carboxypeptidase C-terminal domain AT984_RS19380 PF02016 LD-carboxypeptidase N-terminal domain AT984_RS19390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS19390 PF03466 LysR substrate binding domain AT984_RS19395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AT984_RS19405 PF00491 Arginase family AT984_RS19415 PF13333 Integrase core domain AT984_RS19415 PF00665 Integrase core domain AT984_RS19415 PF13276 HTH-like domain AT984_RS19420 PF01527 Transposase AT984_RS19435 PF01124 MAPEG family AT984_RS19440 PF00005 ABC transporter AT984_RS19440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AT984_RS19445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AT984_RS19445 PF00005 ABC transporter AT984_RS19450 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS19450 PF12911 N-terminal TM domain of oligopeptide transport permease C AT984_RS19455 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS19460 PF01510 N-acetylmuramoyl-L-alanine amidase AT984_RS19465 PF01205 Uncharacterized protein family UPF0029 AT984_RS19465 PF09186 Domain of unknown function (DUF1949) AT984_RS19475 PF01702 Queuine tRNA-ribosyltransferase AT984_RS19490 PF00589 Phage integrase family AT984_RS19490 PF02899 Phage integrase, N-terminal SAM-like domain AT984_RS19520 PF01145 SPFH domain / Band 7 family AT984_RS19520 PF15975 Flotillin AT984_RS19565 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain AT984_RS19565 PF13018 Extended Signal Peptide of Type V secretion system AT984_RS19565 PF05594 Haemagluttinin repeat AT984_RS19565 PF05594 Haemagluttinin repeat AT984_RS19565 PF13332 Hemagglutinin repeat AT984_RS19565 PF05860 haemagglutination activity domain AT984_RS19565 PF05860 haemagglutination activity domain AT984_RS19565 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain AT984_RS19565 PF13018 Extended Signal Peptide of Type V secretion system AT984_RS19565 PF13332 Hemagglutinin repeat AT984_RS19570 PF08479 POTRA domain, ShlB-type AT984_RS19570 PF17287 POTRA domain AT984_RS19570 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AT984_RS19595 PF13683 Integrase core domain AT984_RS19595 PF13276 HTH-like domain AT984_RS19605 PF01527 Transposase AT984_RS19610 PF13683 Integrase core domain AT984_RS19610 PF13276 HTH-like domain AT984_RS19615 PF01527 Transposase AT984_RS19620 PF07690 Major Facilitator Superfamily AT984_RS19635 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AT984_RS19645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AT984_RS19655 PF03475 3-alpha domain AT984_RS19655 PF03473 MOSC domain AT984_RS19660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AT984_RS19665 PF04324 BFD-like [2Fe-2S] binding domain AT984_RS19665 PF01568 Molydopterin dinucleotide binding domain AT984_RS19665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AT984_RS19665 PF00384 Molybdopterin oxidoreductase AT984_RS19670 PF00355 Rieske [2Fe-2S] domain AT984_RS19675 PF07992 Pyridine nucleotide-disulphide oxidoreductase AT984_RS19675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AT984_RS19675 PF04324 BFD-like [2Fe-2S] binding domain AT984_RS19675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AT984_RS19675 PF18267 Rubredoxin NAD+ reductase C-terminal domain AT984_RS19680 PF00005 ABC transporter AT984_RS19685 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS19705 PF00158 Sigma-54 interaction domain AT984_RS19705 PF00072 Response regulator receiver domain AT984_RS19705 PF02954 Bacterial regulatory protein, Fis family AT984_RS19715 PF02687 FtsX-like permease family AT984_RS19715 PF00005 ABC transporter AT984_RS19715 PF12704 MacB-like periplasmic core domain AT984_RS19735 PF13439 Glycosyltransferase Family 4 AT984_RS19735 PF00534 Glycosyl transferases group 1 AT984_RS19770 PF00529 HlyD membrane-fusion protein of T1SS AT984_RS19770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AT984_RS19785 PF00664 ABC transporter transmembrane region AT984_RS19785 PF00005 ABC transporter AT984_RS19785 PF03412 Peptidase C39 family AT984_RS19790 PF00005 ABC transporter AT984_RS19790 PF03412 Peptidase C39 family AT984_RS19790 PF00664 ABC transporter transmembrane region AT984_RS19795 PF05193 Peptidase M16 inactive domain AT984_RS19795 PF00675 Insulinase (Peptidase family M16) AT984_RS19805 PF01527 Transposase AT984_RS19810 PF02661 Fic/DOC family AT984_RS19810 PF12728 Helix-turn-helix domain AT984_RS19815 PF00665 Integrase core domain AT984_RS19820 PF01695 IstB-like ATP binding protein AT984_RS19835 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AT984_RS19835 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AT984_RS19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS19850 PF03466 LysR substrate binding domain AT984_RS19855 PF02810 SEC-C motif AT984_RS19855 PF01043 SecA preprotein cross-linking domain AT984_RS19855 PF07516 SecA Wing and Scaffold domain AT984_RS19855 PF07517 SecA DEAD-like domain AT984_RS19875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS19875 PF03466 LysR substrate binding domain AT984_RS19880 PF01810 LysE type translocator AT984_RS19885 PF01266 FAD dependent oxidoreductase AT984_RS19890 PF00012 Hsp70 protein AT984_RS19900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS19900 PF03466 LysR substrate binding domain AT984_RS19905 PF00171 Aldehyde dehydrogenase family AT984_RS19910 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS19915 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS19920 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS19920 PF17151 Periplasmic sensor domain AT984_RS19925 PF03330 Lytic transglycolase AT984_RS19925 PF05036 Sporulation related domain AT984_RS19930 PF01557 Fumarylacetoacetate (FAA) hydrolase family AT984_RS19935 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AT984_RS19935 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AT984_RS19945 PF01841 Transglutaminase-like superfamily AT984_RS19945 PF08379 Bacterial transglutaminase-like N-terminal region AT984_RS19955 PF14403 Circularly permuted ATP-grasp type 2 AT984_RS19960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AT984_RS19960 PF02203 Tar ligand binding domain homologue AT984_RS19960 PF00672 HAMP domain AT984_RS19965 PF00924 Mechanosensitive ion channel AT984_RS19970 PF00182 Chitinase class I AT984_RS20005 PF01063 Amino-transferase class IV AT984_RS20020 PF03992 Antibiotic biosynthesis monooxygenase AT984_RS20025 PF00563 EAL domain AT984_RS20025 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS20025 PF03707 Bacterial signalling protein N terminal repeat AT984_RS20030 PF18073 Rubredoxin metal binding domain AT984_RS20035 PF01810 LysE type translocator AT984_RS20050 PF00472 RF-1 domain AT984_RS20055 PF01168 Alanine racemase, N-terminal domain AT984_RS20055 PF00842 Alanine racemase, C-terminal domain AT984_RS20060 PF07690 Major Facilitator Superfamily AT984_RS20085 PF00255 Glutathione peroxidase AT984_RS20105 PF03707 Bacterial signalling protein N terminal repeat AT984_RS20105 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS20105 PF00563 EAL domain AT984_RS20110 PF02638 Glycosyl hydrolase-like 10 AT984_RS20120 PF13580 SIS domain AT984_RS20130 PF05114 Protein of unknown function (DUF692) AT984_RS20145 PF00296 Luciferase-like monooxygenase AT984_RS20160 PF00578 AhpC/TSA family AT984_RS20165 PF01425 Amidase AT984_RS20170 PF00230 Major intrinsic protein AT984_RS20175 PF01584 CheW-like domain AT984_RS20175 PF00072 Response regulator receiver domain AT984_RS20175 PF01627 Hpt domain AT984_RS20175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS20180 PF01804 Penicillin amidase AT984_RS20190 PF13411 MerR HTH family regulatory protein AT984_RS20195 PF00403 Heavy-metal-associated domain AT984_RS20210 PF00583 Acetyltransferase (GNAT) family AT984_RS20215 PF02798 Glutathione S-transferase, N-terminal domain AT984_RS20215 PF14497 Glutathione S-transferase, C-terminal domain AT984_RS20225 PF00501 AMP-binding enzyme AT984_RS20230 PF11008 Protein of unknown function (DUF2846) AT984_RS20235 PF00120 Glutamine synthetase, catalytic domain AT984_RS20240 PF10609 NUBPL iron-transfer P-loop NTPase AT984_RS20240 PF01883 Iron-sulfur cluster assembly protein AT984_RS20260 PF07883 Cupin domain AT984_RS20260 PF01381 Helix-turn-helix AT984_RS20265 PF03459 TOBE domain AT984_RS20265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS20270 PF00005 ABC transporter AT984_RS20270 PF08402 TOBE domain AT984_RS20275 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS20285 PF01699 Sodium/calcium exchanger protein AT984_RS20295 PF13478 XdhC Rossmann domain AT984_RS20295 PF02625 XdhC and CoxI family AT984_RS20300 PF01799 [2Fe-2S] binding domain AT984_RS20300 PF00111 2Fe-2S iron-sulfur cluster binding domain AT984_RS20305 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AT984_RS20305 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AT984_RS20310 PF03450 CO dehydrogenase flavoprotein C-terminal domain AT984_RS20310 PF00941 FAD binding domain in molybdopterin dehydrogenase AT984_RS20330 PF01527 Transposase AT984_RS20390 PF13545 Crp-like helix-turn-helix domain AT984_RS20400 PF01774 UreD urease accessory protein AT984_RS20410 PF00005 ABC transporter AT984_RS20415 PF12399 Branched-chain amino acid ATP-binding cassette transporter AT984_RS20415 PF00005 ABC transporter AT984_RS20420 PF02653 Branched-chain amino acid transport system / permease component AT984_RS20425 PF02653 Branched-chain amino acid transport system / permease component AT984_RS20440 PF03976 Polyphosphate kinase 2 (PPK2) AT984_RS20450 PF02627 Carboxymuconolactone decarboxylase family AT984_RS20455 PF00581 Rhodanese-like domain AT984_RS20460 PF00072 Response regulator receiver domain AT984_RS20465 PF18415 Histidine kinase receptor ArcB trans-membrane domain AT984_RS20465 PF01627 Hpt domain AT984_RS20465 PF00989 PAS fold AT984_RS20465 PF00072 Response regulator receiver domain AT984_RS20465 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS20465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS20470 PF00547 Urease, gamma subunit AT984_RS20475 PF04955 HupE / UreJ protein AT984_RS20480 PF00699 Urease beta subunit AT984_RS20485 PF01979 Amidohydrolase family AT984_RS20485 PF00449 Urease alpha-subunit, N-terminal domain AT984_RS20490 PF00583 Acetyltransferase (GNAT) family AT984_RS20495 PF02814 UreE urease accessory protein, N-terminal domain AT984_RS20495 PF05194 UreE urease accessory protein, C-terminal domain AT984_RS20500 PF01730 UreF AT984_RS20505 PF02492 CobW/HypB/UreG, nucleotide-binding domain AT984_RS20510 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS20510 PF03707 Bacterial signalling protein N terminal repeat AT984_RS20510 PF00563 EAL domain AT984_RS20525 PF01169 Uncharacterized protein family UPF0016 AT984_RS20530 PF00486 Transcriptional regulatory protein, C terminal AT984_RS20530 PF00072 Response regulator receiver domain AT984_RS20535 PF00072 Response regulator receiver domain AT984_RS20535 PF01627 Hpt domain AT984_RS20535 PF00497 Bacterial extracellular solute-binding proteins, family 3 AT984_RS20535 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS20535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS20535 PF00989 PAS fold AT984_RS20545 PF07715 TonB-dependent Receptor Plug Domain AT984_RS20545 PF00593 TonB dependent receptor AT984_RS20550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AT984_RS20550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AT984_RS20555 PF01266 FAD dependent oxidoreductase AT984_RS20555 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AT984_RS20560 PF00593 TonB dependent receptor AT984_RS20580 PF03180 NLPA lipoprotein AT984_RS20585 PF00528 Binding-protein-dependent transport system inner membrane component AT984_RS20590 PF09383 NIL domain AT984_RS20590 PF00005 ABC transporter AT984_RS20600 PF00027 Cyclic nucleotide-binding domain AT984_RS20600 PF00520 Ion transport protein AT984_RS20615 PF00069 Protein kinase domain AT984_RS20615 PF03793 PASTA domain AT984_RS20630 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AT984_RS20640 PF03006 Haemolysin-III related AT984_RS20645 PF00563 EAL domain AT984_RS20645 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS20645 PF03707 Bacterial signalling protein N terminal repeat AT984_RS20655 PF04228 Putative neutral zinc metallopeptidase AT984_RS20670 PF07475 HPr Serine kinase C-terminal domain AT984_RS20670 PF02603 HPr Serine kinase N terminus AT984_RS20680 PF01066 CDP-alcohol phosphatidyltransferase AT984_RS20690 PF00392 Bacterial regulatory proteins, gntR family AT984_RS20690 PF00155 Aminotransferase class I and II AT984_RS20695 PF00892 EamA-like transporter family AT984_RS20705 PF13183 4Fe-4S dicluster domain AT984_RS20705 PF02754 Cysteine-rich domain AT984_RS20715 PF01565 FAD binding domain AT984_RS20720 PF01565 FAD binding domain AT984_RS20720 PF02913 FAD linked oxidases, C-terminal domain AT984_RS20740 PF00909 Ammonium Transporter Family AT984_RS20745 PF00543 Nitrogen regulatory protein P-II AT984_RS20755 PF13335 Magnesium chelatase, subunit ChlI C-terminal AT984_RS20755 PF01078 Magnesium chelatase, subunit ChlI AT984_RS20770 PF01527 Transposase AT984_RS20775 PF13683 Integrase core domain AT984_RS20775 PF13276 HTH-like domain AT984_RS20800 PF06968 Biotin and Thiamin Synthesis associated domain AT984_RS20800 PF04055 Radical SAM superfamily AT984_RS20845 PF13683 Integrase core domain AT984_RS20845 PF13276 HTH-like domain AT984_RS20850 PF01527 Transposase AT984_RS20860 PF00665 Integrase core domain AT984_RS20865 PF01695 IstB-like ATP binding protein AT984_RS20875 PF06480 FtsH Extracellular AT984_RS20875 PF17862 AAA+ lid domain AT984_RS20875 PF01434 Peptidase family M41 AT984_RS20875 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS20880 PF01527 Transposase AT984_RS20885 PF00665 Integrase core domain AT984_RS20885 PF13276 HTH-like domain AT984_RS20885 PF13333 Integrase core domain AT984_RS20890 PF00665 Integrase core domain AT984_RS20895 PF01695 IstB-like ATP binding protein AT984_RS20915 PF01078 Magnesium chelatase, subunit ChlI AT984_RS20915 PF13335 Magnesium chelatase, subunit ChlI C-terminal AT984_RS20930 PF02607 B12 binding domain AT984_RS20930 PF02574 Homocysteine S-methyltransferase AT984_RS20930 PF00809 Pterin binding enzyme AT984_RS20930 PF02310 B12 binding domain AT984_RS20930 PF02965 Vitamin B12 dependent methionine synthase, activation domain AT984_RS20940 PF02310 B12 binding domain AT984_RS20940 PF00809 Pterin binding enzyme AT984_RS20940 PF02607 B12 binding domain AT984_RS20940 PF02965 Vitamin B12 dependent methionine synthase, activation domain AT984_RS20940 PF02574 Homocysteine S-methyltransferase AT984_RS20970 PF00004 ATPase family associated with various cellular activities (AAA) AT984_RS20970 PF17862 AAA+ lid domain AT984_RS20970 PF01434 Peptidase family M41 AT984_RS20970 PF06480 FtsH Extracellular AT984_RS20975 PF00486 Transcriptional regulatory protein, C terminal AT984_RS20975 PF00072 Response regulator receiver domain AT984_RS20985 PF03466 LysR substrate binding domain AT984_RS20985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS20990 PF07715 TonB-dependent Receptor Plug Domain AT984_RS20990 PF00593 TonB dependent receptor AT984_RS21000 PF02705 K+ potassium transporter AT984_RS21005 PF02705 K+ potassium transporter AT984_RS21015 PF03594 Benzoate membrane transport protein AT984_RS21020 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AT984_RS21020 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AT984_RS21030 PF00107 Zinc-binding dehydrogenase AT984_RS21030 PF08240 Alcohol dehydrogenase GroES-like domain AT984_RS21035 PF00756 Putative esterase AT984_RS21040 PF07690 Major Facilitator Superfamily AT984_RS21050 PF00067 Cytochrome P450 AT984_RS21060 PF01809 Putative membrane protein insertion efficiency factor AT984_RS21065 PF00675 Insulinase (Peptidase family M16) AT984_RS21065 PF05193 Peptidase M16 inactive domain AT984_RS21070 PF06974 Protein of unknown function (DUF1298) AT984_RS21070 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AT984_RS21080 PF07969 Amidohydrolase family AT984_RS21095 PF00005 ABC transporter AT984_RS21095 PF12848 ABC transporter AT984_RS21095 PF16326 ABC transporter C-terminal domain AT984_RS21110 PF00155 Aminotransferase class I and II AT984_RS21120 PF00155 Aminotransferase class I and II AT984_RS21125 PF02567 Phenazine biosynthesis-like protein AT984_RS21130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AT984_RS21130 PF01411 tRNA synthetases class II (A) AT984_RS21130 PF02272 DHHA1 domain AT984_RS21135 PF00583 Acetyltransferase (GNAT) family AT984_RS21140 PF08450 SMP-30/Gluconolactonase/LRE-like region AT984_RS21150 PF00119 ATP synthase A chain AT984_RS21155 PF00137 ATP synthase subunit C AT984_RS21160 PF00430 ATP synthase B/B' CF(0) AT984_RS21165 PF00213 ATP synthase delta (OSCP) subunit AT984_RS21170 PF00306 ATP synthase alpha/beta chain, C terminal domain AT984_RS21170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AT984_RS21170 PF02874 ATP synthase alpha/beta family, beta-barrel domain AT984_RS21175 PF00231 ATP synthase AT984_RS21180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AT984_RS21180 PF02874 ATP synthase alpha/beta family, beta-barrel domain AT984_RS21185 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AT984_RS21185 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AT984_RS21195 PF03976 Polyphosphate kinase 2 (PPK2) AT984_RS21210 PF04011 LemA family AT984_RS21215 PF01208 Uroporphyrinogen decarboxylase (URO-D) AT984_RS21220 PF18074 Primosomal protein N C-terminal domain AT984_RS21220 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AT984_RS21220 PF17764 3′ DNA-binding domain (3′BD) AT984_RS21220 PF00271 Helicase conserved C-terminal domain AT984_RS21220 PF00270 DEAD/DEAH box helicase AT984_RS21230 PF01339 CheB methylesterase AT984_RS21230 PF00072 Response regulator receiver domain AT984_RS21240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS21240 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS21255 PF13361 UvrD-like helicase C-terminal domain AT984_RS21255 PF00580 UvrD/REP helicase N-terminal domain AT984_RS21260 PF01627 Hpt domain AT984_RS21260 PF00672 HAMP domain AT984_RS21260 PF00072 Response regulator receiver domain AT984_RS21260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AT984_RS21260 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS21260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS21265 PF01590 GAF domain AT984_RS21265 PF00563 EAL domain AT984_RS21265 PF00360 Phytochrome region AT984_RS21265 PF00990 Diguanylate cyclase, GGDEF domain AT984_RS21270 PF00072 Response regulator receiver domain AT984_RS21270 PF04397 LytTr DNA-binding domain AT984_RS21280 PF07694 5TMR of 5TMR-LYT AT984_RS21280 PF06580 Histidine kinase AT984_RS21280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS21295 PF01292 Prokaryotic cytochrome b561 AT984_RS21300 PF01966 HD domain AT984_RS21305 PF09308 LuxQ, periplasmic AT984_RS21305 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS21305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS21305 PF00072 Response regulator receiver domain AT984_RS21315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AT984_RS21315 PF03466 LysR substrate binding domain AT984_RS21320 PF05193 Peptidase M16 inactive domain AT984_RS21320 PF00675 Insulinase (Peptidase family M16) AT984_RS21325 PF04393 Protein of unknown function (DUF535) AT984_RS21330 PF01965 DJ-1/PfpI family AT984_RS21335 PF07690 Major Facilitator Superfamily AT984_RS21345 PF01037 Lrp/AsnC ligand binding domain AT984_RS21365 PF13091 PLD-like domain AT984_RS21370 PF00534 Glycosyl transferases group 1 AT984_RS21385 PF00486 Transcriptional regulatory protein, C terminal AT984_RS21385 PF00072 Response regulator receiver domain AT984_RS21390 PF02690 Na+/Pi-cotransporter AT984_RS21395 PF00892 EamA-like transporter family AT984_RS21415 PF01545 Cation efflux family AT984_RS21415 PF16916 Dimerisation domain of Zinc Transporter AT984_RS21420 PF09086 Domain of unknown function (DUF1924) AT984_RS21435 PF00486 Transcriptional regulatory protein, C terminal AT984_RS21435 PF00072 Response regulator receiver domain AT984_RS21445 PF02142 MGS-like domain AT984_RS21455 PF00072 Response regulator receiver domain AT984_RS21455 PF00672 HAMP domain AT984_RS21455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AT984_RS21455 PF00512 His Kinase A (phospho-acceptor) domain AT984_RS21455 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AT984_RS21455 PF01627 Hpt domain AT984_RS21475 PF03562 MltA specific insert domain AT984_RS21475 PF06725 3D domain AT984_RS21485 PF04379 ApaG domain AT984_RS21490 PF03352 Methyladenine glycosylase AT984_RS21500 PF00834 Ribulose-phosphate 3 epimerase family AT984_RS21505 PF01451 Low molecular weight phosphotyrosine protein phosphatase AT984_RS21525 PF00873 AcrB/AcrD/AcrF family AT984_RS21530 PF13533 Biotin-lipoyl like AT984_RS21535 PF04227 Indigoidine synthase A like protein AT984_RS21540 PF00294 pfkB family carbohydrate kinase AT984_RS21545 PF00497 Bacterial extracellular solute-binding proteins, family 3 AT984_RS21605 PF00196 Bacterial regulatory proteins, luxR family AT984_RS21605 PF00196 Bacterial regulatory proteins, luxR family AT984_RS21625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AT984_RS21625 PF01568 Molydopterin dinucleotide binding domain AT984_RS21625 PF00384 Molybdopterin oxidoreductase AT984_RS21630 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AT984_RS21635 PF03264 NapC/NirT cytochrome c family, N-terminal region AT984_RS21640 PF03616 Sodium/glutamate symporter AT984_RS21645 PF13419 Haloacid dehalogenase-like hydrolase AT984_RS21655 PF04715 Anthranilate synthase component I, N terminal region AT984_RS21655 PF00425 chorismate binding enzyme AT984_RS21660 PF00117 Glutamine amidotransferase class-I AT984_RS21665 PF01212 Beta-eliminating lyase AT984_RS21670 PF00591 Glycosyl transferase family, a/b domain AT984_RS21670 PF02885 Glycosyl transferase family, helical bundle domain AT984_RS21680 PF00218 Indole-3-glycerol phosphate synthase AT984_RS21685 PF03167 Uracil DNA glycosylase superfamily AT984_RS21690 PF01869 BadF/BadG/BcrA/BcrD ATPase family AT984_RS21695 PF07702 UTRA domain AT984_RS21695 PF00392 Bacterial regulatory proteins, gntR family AT984_RS21700 PF01979 Amidohydrolase family AT984_RS21705 PF01380 SIS domain AT984_RS21710 PF00933 Glycosyl hydrolase family 3 N terminal domain AT984_RS21710 PF01915 Glycosyl hydrolase family 3 C-terminal domain AT984_RS21715 PF07690 Major Facilitator Superfamily AT984_RS21730 PF04820 Tryptophan halogenase AT984_RS21760 PF00009 Elongation factor Tu GTP binding domain AT984_RS21760 PF03144 Elongation factor Tu domain 2 AT984_RS21760 PF03143 Elongation factor Tu C-terminal domain AT984_RS21775 PF00467 KOW motif AT984_RS21775 PF02357 Transcription termination factor nusG AT984_RS21780 PF00298 Ribosomal protein L11, RNA binding domain AT984_RS21780 PF03946 Ribosomal protein L11, N-terminal domain AT984_RS21785 PF00687 Ribosomal protein L1p/L10e family AT984_RS21790 PF00466 Ribosomal protein L10 AT984_RS21795 PF16320 Ribosomal protein L7/L12 dimerisation domain AT984_RS21795 PF00542 Ribosomal protein L7/L12 C-terminal domain AT984_RS21800 PF04565 RNA polymerase Rpb2, domain 3 AT984_RS21800 PF10385 RNA polymerase beta subunit external 1 domain AT984_RS21800 PF04560 RNA polymerase Rpb2, domain 7 AT984_RS21800 PF04563 RNA polymerase beta subunit AT984_RS21800 PF00562 RNA polymerase Rpb2, domain 6 AT984_RS21800 PF04561 RNA polymerase Rpb2, domain 2 AT984_RS21805 PF05000 RNA polymerase Rpb1, domain 4 AT984_RS21805 PF04983 RNA polymerase Rpb1, domain 3 AT984_RS21805 PF04998 RNA polymerase Rpb1, domain 5 AT984_RS21805 PF00623 RNA polymerase Rpb1, domain 2 AT984_RS21805 PF04997 RNA polymerase Rpb1, domain 1 AT984_RS21820 PF13007 Transposase C of IS166 homeodomain AT984_RS21820 PF03050 Transposase IS66 family AT984_RS21820 PF13005 zinc-finger binding domain of transposase IS66 AT984_RS21820 PF13817 IS66 C-terminal element AT984_RS21830 PF00164 Ribosomal protein S12/S23 AT984_RS21835 PF00177 Ribosomal protein S7p/S5e AT984_RS21840 PF14492 Elongation Factor G, domain II AT984_RS21840 PF03144 Elongation factor Tu domain 2 AT984_RS21840 PF00679 Elongation factor G C-terminus AT984_RS21840 PF03764 Elongation factor G, domain IV AT984_RS21840 PF00009 Elongation factor Tu GTP binding domain AT984_RS21845 PF00009 Elongation factor Tu GTP binding domain AT984_RS21845 PF03143 Elongation factor Tu C-terminal domain AT984_RS21845 PF03144 Elongation factor Tu domain 2 AT984_RS21850 PF00338 Ribosomal protein S10p/S20e AT984_RS21855 PF00297 Ribosomal protein L3 AT984_RS21860 PF00573 Ribosomal protein L4/L1 family AT984_RS21865 PF00276 Ribosomal protein L23 AT984_RS21870 PF03947 Ribosomal Proteins L2, C-terminal domain AT984_RS21870 PF00181 Ribosomal Proteins L2, RNA binding domain AT984_RS21875 PF00203 Ribosomal protein S19 AT984_RS21880 PF00237 Ribosomal protein L22p/L17e AT984_RS21885 PF00189 Ribosomal protein S3, C-terminal domain AT984_RS21885 PF07650 KH domain AT984_RS21890 PF00252 Ribosomal protein L16p/L10e AT984_RS21895 PF00831 Ribosomal L29 protein AT984_RS21900 PF00366 Ribosomal protein S17 AT984_RS21905 PF08534 Redoxin AT984_RS21910 PF00238 Ribosomal protein L14p/L23e AT984_RS21915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AT984_RS21920 PF00281 Ribosomal protein L5 AT984_RS21920 PF00673 ribosomal L5P family C-terminus AT984_RS21925 PF00253 Ribosomal protein S14p/S29e AT984_RS21930 PF00410 Ribosomal protein S8 AT984_RS21935 PF00347 Ribosomal protein L6 AT984_RS21940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AT984_RS21945 PF00333 Ribosomal protein S5, N-terminal domain AT984_RS21945 PF03719 Ribosomal protein S5, C-terminal domain AT984_RS21950 PF00327 Ribosomal protein L30p/L7e AT984_RS21955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AT984_RS21960 PF00344 SecY translocase AT984_RS21965 PF01176 Translation initiation factor 1A / IF-1 AT984_RS21970 PF00416 Ribosomal protein S13/S18 AT984_RS21975 PF00411 Ribosomal protein S11 AT984_RS21980 PF00163 Ribosomal protein S4/S9 N-terminal domain AT984_RS21980 PF01479 S4 domain AT984_RS21985 PF01000 RNA polymerase Rpb3/RpoA insert domain AT984_RS21985 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AT984_RS21985 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AT984_RS21990 PF01196 Ribosomal protein L17 AT984_RS21995 PF11412 Disulphide bond corrector protein DsbC AT984_RS21995 PF02683 Cytochrome C biogenesis protein transmembrane region AT984_RS22015 PF00107 Zinc-binding dehydrogenase AT984_RS22015 PF16884 N-terminal domain of oxidoreductase AT984_RS22020 PF00465 Iron-containing alcohol dehydrogenase AT984_RS22025 PF16925 Tetracyclin repressor-like, C-terminal domain AT984_RS22025 PF00440 Bacterial regulatory proteins, tetR family AT984_RS22030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AT984_RS22035 PF17864 RuvB AAA lid domain AT984_RS22035 PF05491 RuvB C-terminal winged helix domain AT984_RS22035 PF05496 Holliday junction DNA helicase RuvB P-loop domain AT984_RS22040 PF07499 RuvA, C-terminal domain AT984_RS22040 PF01330 RuvA N terminal domain AT984_RS22045 PF00072 Response regulator receiver domain AT984_RS22045 PF00196 Bacterial regulatory proteins, luxR family AT984_RS22055 PF02562 PhoH-like protein AT984_RS22060 PF02130 Uncharacterized protein family UPF0054 AT984_RS22065 PF01544 CorA-like Mg2+ transporter protein AT984_RS22070 PF00490 Delta-aminolevulinic acid dehydratase AT984_RS22075 PF03653 Uncharacterised protein family (UPF0093) AT984_RS22090 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AT984_RS22095 PF07943 Penicillin-binding protein 5, C-terminal domain AT984_RS22095 PF00768 D-alanyl-D-alanine carboxypeptidase AT984_RS22100 PF01063 Amino-transferase class IV AT984_RS22105 PF04359 Protein of unknown function (DUF493) AT984_RS22115 PF03099 Biotin/lipoate A/B protein ligase family AT984_RS22120 PF04055 Radical SAM superfamily AT984_RS22120 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AT984_RS22125 PF08534 Redoxin AT984_RS22135 PF02515 CoA-transferase family III AT984_RS22150 PF00381 PTS HPr component phosphorylation site AT984_RS22160 PF05524 PEP-utilising enzyme, N-terminal AT984_RS22160 PF02896 PEP-utilising enzyme, TIM barrel domain AT984_RS22160 PF00391 PEP-utilising enzyme, mobile domain