AT984_RS00115	PWY-7199	pyrimidine deoxyribonucleosides salvage
AT984_RS00225	PWY-1042	glycolysis IV (plant cytosol)
AT984_RS00225	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS00225	PWY-6886	1-butanol autotrophic biosynthesis
AT984_RS00225	PWY-6901	superpathway of glucose and xylose degradation
AT984_RS00225	PWY-7003	glycerol degradation to butanol
AT984_RS00240	PWY-1281	sulfoacetaldehyde degradation I
AT984_RS00240	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AT984_RS00240	PWY-5482	pyruvate fermentation to acetate II
AT984_RS00240	PWY-5485	pyruvate fermentation to acetate IV
AT984_RS00240	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS00240	PWY-6637	sulfolactate degradation II
AT984_RS00240	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AT984_RS00245	PWY-1042	glycolysis IV (plant cytosol)
AT984_RS00245	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AT984_RS00245	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS00245	PWY-5723	Rubisco shunt
AT984_RS00245	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AT984_RS00245	PWY-6886	1-butanol autotrophic biosynthesis
AT984_RS00245	PWY-6901	superpathway of glucose and xylose degradation
AT984_RS00245	PWY-7003	glycerol degradation to butanol
AT984_RS00245	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AT984_RS00245	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AT984_RS00260	PWY-1042	glycolysis IV (plant cytosol)
AT984_RS00260	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AT984_RS00260	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS00260	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AT984_RS00260	PWY-7385	1,3-propanediol biosynthesis (engineered)
AT984_RS00265	PWY-6123	inosine-5'-phosphate biosynthesis I
AT984_RS00265	PWY-6124	inosine-5'-phosphate biosynthesis II
AT984_RS00265	PWY-7234	inosine-5'-phosphate biosynthesis III
AT984_RS00280	PWY-6123	inosine-5'-phosphate biosynthesis I
AT984_RS00280	PWY-7234	inosine-5'-phosphate biosynthesis III
AT984_RS00300	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AT984_RS00300	PWY-5368	dimorphecolate biosynthesis
AT984_RS00300	PWY-5995	linoleate biosynthesis I (plants)
AT984_RS00300	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AT984_RS00300	PWY-6803	phosphatidylcholine acyl editing
AT984_RS00300	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AT984_RS00300	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AT984_RS00300	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AT984_RS00300	PWY-7470	phosphatidylcholine biosynthesis VII
AT984_RS00300	PWY-7618	ricinoleate biosynthesis
AT984_RS00420	PWY-2201	folate transformations I
AT984_RS00420	PWY-3841	folate transformations II
AT984_RS00430	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AT984_RS00460	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AT984_RS00460	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AT984_RS00475	PWY-2941	L-lysine biosynthesis II
AT984_RS00475	PWY-5097	L-lysine biosynthesis VI
AT984_RS00505	PWY-6749	CMP-legionaminate biosynthesis I
AT984_RS00540	PWY-5691	urate degradation to allantoin I
AT984_RS00540	PWY-7394	urate degradation to allantoin II
AT984_RS00570	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AT984_RS00570	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AT984_RS00695	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AT984_RS00695	PWY-6549	L-glutamine biosynthesis III
AT984_RS00695	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AT984_RS00695	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AT984_RS00705	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AT984_RS00705	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AT984_RS00705	PWY-5989	stearate biosynthesis II (bacteria and plants)
AT984_RS00705	PWY-6113	superpathway of mycolate biosynthesis
AT984_RS00705	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AT984_RS00705	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AT984_RS00705	PWY-7663	gondoate biosynthesis (anaerobic)
AT984_RS00705	PWY-7664	oleate biosynthesis IV (anaerobic)
AT984_RS00705	PWYG-321	mycolate biosynthesis
AT984_RS00855	PWY-5691	urate degradation to allantoin I
AT984_RS00855	PWY-7394	urate degradation to allantoin II
AT984_RS00865	PWY-5691	urate degradation to allantoin I
AT984_RS00865	PWY-7394	urate degradation to allantoin II
AT984_RS00895	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS00895	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AT984_RS00895	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AT984_RS00895	PWY-6596	adenosine nucleotides degradation I
AT984_RS00895	PWY-6606	guanosine nucleotides degradation II
AT984_RS00895	PWY-6607	guanosine nucleotides degradation I
AT984_RS00895	PWY-6608	guanosine nucleotides degradation III
AT984_RS00895	PWY-6999	theophylline degradation
AT984_RS00900	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS00900	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AT984_RS00900	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AT984_RS00900	PWY-6596	adenosine nucleotides degradation I
AT984_RS00900	PWY-6606	guanosine nucleotides degradation II
AT984_RS00900	PWY-6607	guanosine nucleotides degradation I
AT984_RS00900	PWY-6608	guanosine nucleotides degradation III
AT984_RS00900	PWY-6999	theophylline degradation
AT984_RS00905	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS00905	PWY-6606	guanosine nucleotides degradation II
AT984_RS00905	PWY-6608	guanosine nucleotides degradation III
AT984_RS00905	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AT984_RS00935	PWY-7052	cyanophycin metabolism
AT984_RS00940	PWY-7052	cyanophycin metabolism
AT984_RS00990	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AT984_RS00990	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AT984_RS00990	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AT984_RS00990	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AT984_RS01020	PWY-7193	pyrimidine ribonucleosides salvage I
AT984_RS01200	PWY-1281	sulfoacetaldehyde degradation I
AT984_RS01200	PWY-5482	pyruvate fermentation to acetate II
AT984_RS01200	PWY-5485	pyruvate fermentation to acetate IV
AT984_RS01200	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS01200	PWY-6637	sulfolactate degradation II
AT984_RS01205	PWY-5482	pyruvate fermentation to acetate II
AT984_RS01205	PWY-5485	pyruvate fermentation to acetate IV
AT984_RS01205	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS01220	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AT984_RS01265	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AT984_RS01265	PWY-5667	CDP-diacylglycerol biosynthesis I
AT984_RS01265	PWY-6453	stigma estolide biosynthesis
AT984_RS01265	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AT984_RS01265	PWY-7587	oleate biosynthesis III (cyanobacteria)
AT984_RS01280	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AT984_RS01280	PWY-6148	tetrahydromethanopterin biosynthesis
AT984_RS01280	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AT984_RS01280	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AT984_RS01350	PWY-3781	aerobic respiration I (cytochrome c)
AT984_RS01350	PWY-4521	arsenite oxidation I (respiratory)
AT984_RS01350	PWY-6692	Fe(II) oxidation
AT984_RS01350	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AT984_RS01350	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AT984_RS01400	PWY-5669	phosphatidylethanolamine biosynthesis I
AT984_RS01550	PWY-6825	phosphatidylcholine biosynthesis V
AT984_RS01570	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AT984_RS01570	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AT984_RS01570	PWY-6269	adenosylcobalamin salvage from cobinamide II
AT984_RS01575	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AT984_RS01575	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AT984_RS01575	PWY-6269	adenosylcobalamin salvage from cobinamide II
AT984_RS01600	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AT984_RS01600	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AT984_RS01600	PWY-6268	adenosylcobalamin salvage from cobalamin
AT984_RS01600	PWY-6269	adenosylcobalamin salvage from cobinamide II
AT984_RS01625	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AT984_RS01625	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AT984_RS01625	PWY-6269	adenosylcobalamin salvage from cobinamide II
AT984_RS01640	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AT984_RS01670	PWY-7560	methylerythritol phosphate pathway II
AT984_RS01710	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AT984_RS01710	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AT984_RS01710	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AT984_RS01780	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AT984_RS01850	PWY-5686	UMP biosynthesis
AT984_RS01870	PWY-1622	formaldehyde assimilation I (serine pathway)
AT984_RS01870	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS01905	PWY-5667	CDP-diacylglycerol biosynthesis I
AT984_RS01905	PWY-5981	CDP-diacylglycerol biosynthesis III
AT984_RS01915	PWY-6004	glycine betaine biosynthesis V (from glycine)
AT984_RS01935	PWY-3781	aerobic respiration I (cytochrome c)
AT984_RS01935	PWY-4521	arsenite oxidation I (respiratory)
AT984_RS01935	PWY-6692	Fe(II) oxidation
AT984_RS01935	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AT984_RS02100	PWY-3221	dTDP-L-rhamnose biosynthesis II
AT984_RS02100	PWY-6808	dTDP-D-forosamine biosynthesis
AT984_RS02100	PWY-6942	dTDP-D-desosamine biosynthesis
AT984_RS02100	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AT984_RS02100	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AT984_RS02100	PWY-6974	dTDP-L-olivose biosynthesis
AT984_RS02100	PWY-6976	dTDP-L-mycarose biosynthesis
AT984_RS02100	PWY-7104	dTDP-L-megosamine biosynthesis
AT984_RS02100	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AT984_RS02100	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AT984_RS02100	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AT984_RS02100	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AT984_RS02100	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AT984_RS02100	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AT984_RS02100	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AT984_RS02100	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AT984_RS02100	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AT984_RS02100	PWY-7688	AT984_RS02100
AT984_RS02110	PWY-3221	dTDP-L-rhamnose biosynthesis II
AT984_RS02110	PWY-6808	dTDP-D-forosamine biosynthesis
AT984_RS02110	PWY-6942	dTDP-D-desosamine biosynthesis
AT984_RS02110	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AT984_RS02110	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AT984_RS02110	PWY-6974	dTDP-L-olivose biosynthesis
AT984_RS02110	PWY-6976	dTDP-L-mycarose biosynthesis
AT984_RS02110	PWY-7104	dTDP-L-megosamine biosynthesis
AT984_RS02110	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AT984_RS02110	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AT984_RS02110	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AT984_RS02110	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AT984_RS02110	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AT984_RS02110	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AT984_RS02110	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AT984_RS02110	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AT984_RS02110	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AT984_RS02110	PWY-7688	AT984_RS02110
AT984_RS02125	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
AT984_RS02135	PWY-7651	heparan sulfate degradation
AT984_RS02215	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
AT984_RS02220	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
AT984_RS02220	PWY-5940	streptomycin biosynthesis
AT984_RS02230	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AT984_RS02230	PWY-5739	GDP-D-perosamine biosynthesis
AT984_RS02230	PWY-5740	GDP-L-colitose biosynthesis
AT984_RS02230	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AT984_RS02230	PWY-7573	GDP-mycosamine biosynthesis
AT984_RS02235	PWY-5481	pyruvate fermentation to lactate
AT984_RS02235	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AT984_RS02235	PWY-6901	superpathway of glucose and xylose degradation
AT984_RS02255	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AT984_RS02255	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AT984_RS02255	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AT984_RS02290	PWY-4381	fatty acid biosynthesis initiation I
AT984_RS02295	PWY-4381	fatty acid biosynthesis initiation I
AT984_RS02295	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AT984_RS02295	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AT984_RS02300	PWY-5367	petroselinate biosynthesis
AT984_RS02300	PWY-5515	L-arabinose degradation II
AT984_RS02300	PWY-5525	D-glucuronate degradation I
AT984_RS02300	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AT984_RS02300	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AT984_RS02300	PWY-5989	stearate biosynthesis II (bacteria and plants)
AT984_RS02300	PWY-5994	palmitate biosynthesis I (animals and fungi)
AT984_RS02300	PWY-6113	superpathway of mycolate biosynthesis
AT984_RS02300	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AT984_RS02300	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AT984_RS02300	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AT984_RS02300	PWY-7663	gondoate biosynthesis (anaerobic)
AT984_RS02300	PWY-7664	oleate biosynthesis IV (anaerobic)
AT984_RS02300	PWYG-321	mycolate biosynthesis
AT984_RS02365	PWY-6012	acyl carrier protein metabolism I
AT984_RS02365	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AT984_RS02370	PWY-6902	chitin degradation II
AT984_RS02450	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AT984_RS02555	PWY-4041	&gamma;-glutamyl cycle
AT984_RS02555	PWY-5826	hypoglycin biosynthesis
AT984_RS02645	PWY-5381	pyridine nucleotide cycling (plants)
AT984_RS02910	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AT984_RS02910	PWY-2201	folate transformations I
AT984_RS02910	PWY-3841	folate transformations II
AT984_RS02910	PWY-5030	L-histidine degradation III
AT984_RS02910	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS02910	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AT984_RS02925	PWY-6891	thiazole biosynthesis II (Bacillus)
AT984_RS02925	PWY-6892	thiazole biosynthesis I (E. coli)
AT984_RS02925	PWY-7560	methylerythritol phosphate pathway II
AT984_RS02935	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AT984_RS02935	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AT984_RS02995	PWY-381	nitrate reduction II (assimilatory)
AT984_RS02995	PWY-5675	nitrate reduction V (assimilatory)
AT984_RS02995	PWY-6549	L-glutamine biosynthesis III
AT984_RS02995	PWY-6963	ammonia assimilation cycle I
AT984_RS02995	PWY-6964	ammonia assimilation cycle II
AT984_RS03045	PWY-5676	acetyl-CoA fermentation to butanoate II
AT984_RS03045	PWY-5741	ethylmalonyl-CoA pathway
AT984_RS03045	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AT984_RS03090	PWY-381	nitrate reduction II (assimilatory)
AT984_RS03090	PWY-5675	nitrate reduction V (assimilatory)
AT984_RS03090	PWY-6549	L-glutamine biosynthesis III
AT984_RS03090	PWY-6963	ammonia assimilation cycle I
AT984_RS03090	PWY-6964	ammonia assimilation cycle II
AT984_RS03255	PWY-1361	benzoyl-CoA degradation I (aerobic)
AT984_RS03255	PWY-5109	2-methylbutanoate biosynthesis
AT984_RS03255	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AT984_RS03255	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AT984_RS03255	PWY-5177	glutaryl-CoA degradation
AT984_RS03255	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AT984_RS03255	PWY-6435	4-hydroxybenzoate biosynthesis V
AT984_RS03255	PWY-6583	pyruvate fermentation to butanol I
AT984_RS03255	PWY-6863	pyruvate fermentation to hexanol
AT984_RS03255	PWY-6883	pyruvate fermentation to butanol II
AT984_RS03255	PWY-6944	androstenedione degradation
AT984_RS03255	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AT984_RS03255	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AT984_RS03255	PWY-7007	methyl ketone biosynthesis
AT984_RS03255	PWY-7046	4-coumarate degradation (anaerobic)
AT984_RS03255	PWY-7094	fatty acid salvage
AT984_RS03255	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AT984_RS03255	PWY-735	jasmonic acid biosynthesis
AT984_RS03255	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AT984_RS03255	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AT984_RS03255	PWY-7726	AT984_RS03255
AT984_RS03520	PWY-5392	reductive TCA cycle II
AT984_RS03520	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AT984_RS03520	PWY-5690	TCA cycle II (plants and fungi)
AT984_RS03520	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS03520	PWY-6728	methylaspartate cycle
AT984_RS03520	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS03520	PWY-7254	TCA cycle VII (acetate-producers)
AT984_RS03520	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AT984_RS03605	PWY-4981	L-proline biosynthesis II (from arginine)
AT984_RS03605	PWY-4984	urea cycle
AT984_RS03605	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AT984_RS03610	PWY-4981	L-proline biosynthesis II (from arginine)
AT984_RS03815	PWY-5350	thiosulfate disproportionation III (rhodanese)
AT984_RS03835	PWY-6891	thiazole biosynthesis II (Bacillus)
AT984_RS03835	PWY-6892	thiazole biosynthesis I (E. coli)
AT984_RS03835	PWY-7560	methylerythritol phosphate pathway II
AT984_RS03840	PWY-5663	tetrahydrobiopterin biosynthesis I
AT984_RS03840	PWY-5664	tetrahydrobiopterin biosynthesis II
AT984_RS03840	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AT984_RS03840	PWY-6703	preQ<sub>0</sub> biosynthesis
AT984_RS03840	PWY-6983	tetrahydrobiopterin biosynthesis III
AT984_RS03840	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AT984_RS03850	PWY-2941	L-lysine biosynthesis II
AT984_RS03850	PWY-2942	L-lysine biosynthesis III
AT984_RS03850	PWY-5097	L-lysine biosynthesis VI
AT984_RS03930	PWY-4261	glycerol degradation I
AT984_RS03930	PWY-6118	glycerol-3-phosphate shuttle
AT984_RS03930	PWY-6952	glycerophosphodiester degradation
AT984_RS03935	PWY-4261	glycerol degradation I
AT984_RS03955	PWY-702	L-methionine biosynthesis II
AT984_RS03985	PWY-2201	folate transformations I
AT984_RS03985	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS04125	PWY-5101	L-isoleucine biosynthesis II
AT984_RS04125	PWY-5103	L-isoleucine biosynthesis III
AT984_RS04125	PWY-5104	L-isoleucine biosynthesis IV
AT984_RS04125	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AT984_RS04125	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AT984_RS04125	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AT984_RS04125	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AT984_RS04130	PWY-5101	L-isoleucine biosynthesis II
AT984_RS04130	PWY-5103	L-isoleucine biosynthesis III
AT984_RS04130	PWY-5104	L-isoleucine biosynthesis IV
AT984_RS04130	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AT984_RS04130	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AT984_RS04130	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AT984_RS04130	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AT984_RS04135	PWY-5103	L-isoleucine biosynthesis III
AT984_RS04135	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AT984_RS04140	PWY-5669	phosphatidylethanolamine biosynthesis I
AT984_RS04145	PWY-6871	3-methylbutanol biosynthesis
AT984_RS04150	PWY-6871	3-methylbutanol biosynthesis
AT984_RS04485	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS04895	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AT984_RS04930	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AT984_RS04930	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AT984_RS04930	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AT984_RS04940	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AT984_RS04940	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AT984_RS04945	PWY-5381	pyridine nucleotide cycling (plants)
AT984_RS04945	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AT984_RS04955	PWY-6825	phosphatidylcholine biosynthesis V
AT984_RS05035	PWY-5386	methylglyoxal degradation I
AT984_RS05065	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS05150	PWY-4983	L-citrulline-nitric oxide cycle
AT984_RS05150	PWY-4984	urea cycle
AT984_RS05150	PWY-5	canavanine biosynthesis
AT984_RS05150	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AT984_RS05150	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AT984_RS05180	PWY-1622	formaldehyde assimilation I (serine pathway)
AT984_RS05180	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AT984_RS05180	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS05180	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AT984_RS05180	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AT984_RS05180	PWY-6549	L-glutamine biosynthesis III
AT984_RS05180	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AT984_RS05180	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AT984_RS05180	PWY-7124	ethylene biosynthesis V (engineered)
AT984_RS05185	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AT984_RS05185	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AT984_RS05190	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AT984_RS05190	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AT984_RS05235	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS05275	PWY-4041	&gamma;-glutamyl cycle
AT984_RS05275	PWY-5826	hypoglycin biosynthesis
AT984_RS05420	PWY-4702	phytate degradation I
AT984_RS05490	PWY-5392	reductive TCA cycle II
AT984_RS05490	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AT984_RS05490	PWY-5690	TCA cycle II (plants and fungi)
AT984_RS05490	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS05490	PWY-6728	methylaspartate cycle
AT984_RS05490	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS05490	PWY-7254	TCA cycle VII (acetate-producers)
AT984_RS05490	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AT984_RS05505	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AT984_RS05505	PWY-7118	chitin degradation to ethanol
AT984_RS05530	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AT984_RS05635	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AT984_RS05635	PWY-7205	CMP phosphorylation
AT984_RS05640	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AT984_RS05645	PWY-3461	L-tyrosine biosynthesis II
AT984_RS05645	PWY-3462	L-phenylalanine biosynthesis II
AT984_RS05645	PWY-6120	L-tyrosine biosynthesis III
AT984_RS05645	PWY-6627	salinosporamide A biosynthesis
AT984_RS05645	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AT984_RS05645	PWY-7626	bacilysin biosynthesis
AT984_RS05670	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AT984_RS05670	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AT984_RS05670	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AT984_RS05670	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AT984_RS05670	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AT984_RS05670	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AT984_RS05670	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AT984_RS05670	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AT984_RS05670	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AT984_RS05670	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AT984_RS05675	PWY-181	photorespiration
AT984_RS05780	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AT984_RS05780	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AT984_RS06225	PWY-6167	flavin biosynthesis II (archaea)
AT984_RS06225	PWY-6168	flavin biosynthesis III (fungi)
AT984_RS06225	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS06335	PWY-5022	4-aminobutanoate degradation V
AT984_RS06335	PWY-6728	methylaspartate cycle
AT984_RS06335	PWY-7126	ethylene biosynthesis IV
AT984_RS06380	PWY-3121	linamarin degradation
AT984_RS06380	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AT984_RS06380	PWY-6002	lotaustralin degradation
AT984_RS06380	PWY-6788	cellulose degradation II (fungi)
AT984_RS06380	PWY-7089	taxiphyllin bioactivation
AT984_RS06380	PWY-7091	linustatin bioactivation
AT984_RS06380	PWY-7092	neolinustatin bioactivation
AT984_RS06425	PWY-2722	trehalose degradation IV
AT984_RS06425	PWY-2723	trehalose degradation V
AT984_RS06425	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AT984_RS06425	PWY-5661	GDP-glucose biosynthesis
AT984_RS06425	PWY-621	sucrose degradation III (sucrose invertase)
AT984_RS06425	PWY-7238	sucrose biosynthesis II
AT984_RS06425	PWY-7385	1,3-propanediol biosynthesis (engineered)
AT984_RS06445	PWY-5101	L-isoleucine biosynthesis II
AT984_RS06445	PWY-5103	L-isoleucine biosynthesis III
AT984_RS06445	PWY-5104	L-isoleucine biosynthesis IV
AT984_RS06445	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AT984_RS06515	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AT984_RS06570	PWY-5101	L-isoleucine biosynthesis II
AT984_RS06570	PWY-5103	L-isoleucine biosynthesis III
AT984_RS06570	PWY-5104	L-isoleucine biosynthesis IV
AT984_RS06570	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AT984_RS06570	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AT984_RS06570	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AT984_RS06570	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AT984_RS06600	PWY-5269	cardiolipin biosynthesis II
AT984_RS06600	PWY-5668	cardiolipin biosynthesis I
AT984_RS06635	PWY-5381	pyridine nucleotide cycling (plants)
AT984_RS06635	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AT984_RS06635	PWY-6596	adenosine nucleotides degradation I
AT984_RS06635	PWY-6606	guanosine nucleotides degradation II
AT984_RS06635	PWY-6607	guanosine nucleotides degradation I
AT984_RS06635	PWY-6608	guanosine nucleotides degradation III
AT984_RS06635	PWY-7185	UTP and CTP dephosphorylation I
AT984_RS06670	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AT984_RS06670	PWY-5686	UMP biosynthesis
AT984_RS06670	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AT984_RS06675	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AT984_RS06675	PWY-5686	UMP biosynthesis
AT984_RS06675	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AT984_RS06705	PWY-6614	tetrahydrofolate biosynthesis
AT984_RS06710	PWY-6749	CMP-legionaminate biosynthesis I
AT984_RS06765	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS06825	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AT984_RS06860	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AT984_RS06865	PWY-6749	CMP-legionaminate biosynthesis I
AT984_RS07100	PWY-6167	flavin biosynthesis II (archaea)
AT984_RS07100	PWY-6168	flavin biosynthesis III (fungi)
AT984_RS07105	PWY-6167	flavin biosynthesis II (archaea)
AT984_RS07105	PWY-6168	flavin biosynthesis III (fungi)
AT984_RS07105	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AT984_RS07110	PWY-5525	D-glucuronate degradation I
AT984_RS07155	PWY-1622	formaldehyde assimilation I (serine pathway)
AT984_RS07155	PWY-181	photorespiration
AT984_RS07155	PWY-2161	folate polyglutamylation
AT984_RS07155	PWY-2201	folate transformations I
AT984_RS07155	PWY-3661	glycine betaine degradation I
AT984_RS07155	PWY-3661-1	glycine betaine degradation II (mammalian)
AT984_RS07155	PWY-3841	folate transformations II
AT984_RS07155	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS07165	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AT984_RS07165	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AT984_RS07165	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AT984_RS07165	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AT984_RS07165	PWY-6978	plastoquinol-9 biosynthesis II
AT984_RS07210	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AT984_RS07210	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AT984_RS07270	PWY-5101	L-isoleucine biosynthesis II
AT984_RS07270	PWY-5103	L-isoleucine biosynthesis III
AT984_RS07270	PWY-5104	L-isoleucine biosynthesis IV
AT984_RS07270	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AT984_RS07275	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AT984_RS07275	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AT984_RS07275	PWY-7242	D-fructuronate degradation
AT984_RS07275	PWY-7310	D-glucosaminate degradation
AT984_RS07275	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AT984_RS07365	PWY-381	nitrate reduction II (assimilatory)
AT984_RS07365	PWY-5675	nitrate reduction V (assimilatory)
AT984_RS07365	PWY-6549	L-glutamine biosynthesis III
AT984_RS07365	PWY-6963	ammonia assimilation cycle I
AT984_RS07365	PWY-6964	ammonia assimilation cycle II
AT984_RS07425	PWY-1042	glycolysis IV (plant cytosol)
AT984_RS07425	PWY-1622	formaldehyde assimilation I (serine pathway)
AT984_RS07425	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AT984_RS07425	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS07425	PWY-5723	Rubisco shunt
AT984_RS07425	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AT984_RS07425	PWY-6886	1-butanol autotrophic biosynthesis
AT984_RS07425	PWY-6901	superpathway of glucose and xylose degradation
AT984_RS07425	PWY-7003	glycerol degradation to butanol
AT984_RS07425	PWY-7124	ethylene biosynthesis V (engineered)
AT984_RS07425	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AT984_RS07435	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AT984_RS07435	PWY-7177	UTP and CTP dephosphorylation II
AT984_RS07435	PWY-7185	UTP and CTP dephosphorylation I
AT984_RS07450	PWY-2301	<i>myo</i>-inositol biosynthesis
AT984_RS07450	PWY-4702	phytate degradation I
AT984_RS07450	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AT984_RS07455	PWY-6004	glycine betaine biosynthesis V (from glycine)
AT984_RS07460	PWY-6936	seleno-amino acid biosynthesis
AT984_RS07460	PWY-7274	D-cycloserine biosynthesis
AT984_RS07575	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS07575	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AT984_RS07575	PWY-6638	sulfolactate degradation III
AT984_RS07575	PWY-6642	(<i>R</i>)-cysteate degradation
AT984_RS07575	PWY-6643	coenzyme M biosynthesis II
AT984_RS07575	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AT984_RS07575	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AT984_RS07575	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AT984_RS07590	PWY-6823	molybdenum cofactor biosynthesis
AT984_RS07590	PWY-6891	thiazole biosynthesis II (Bacillus)
AT984_RS07590	PWY-6892	thiazole biosynthesis I (E. coli)
AT984_RS07590	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AT984_RS07620	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AT984_RS07620	PWY-5368	dimorphecolate biosynthesis
AT984_RS07620	PWY-5995	linoleate biosynthesis I (plants)
AT984_RS07620	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AT984_RS07620	PWY-6803	phosphatidylcholine acyl editing
AT984_RS07620	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AT984_RS07620	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AT984_RS07620	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AT984_RS07620	PWY-7470	phosphatidylcholine biosynthesis VII
AT984_RS07620	PWY-7618	ricinoleate biosynthesis
AT984_RS07645	PWY-1042	glycolysis IV (plant cytosol)
AT984_RS07645	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS07645	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AT984_RS07645	PWY-7003	glycerol degradation to butanol
AT984_RS07800	PWY-5344	L-homocysteine biosynthesis
AT984_RS07800	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AT984_RS07810	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AT984_RS07960	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AT984_RS07980	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AT984_RS07990	PWY-381	nitrate reduction II (assimilatory)
AT984_RS07990	PWY-5675	nitrate reduction V (assimilatory)
AT984_RS07990	PWY-6549	L-glutamine biosynthesis III
AT984_RS07990	PWY-6963	ammonia assimilation cycle I
AT984_RS07990	PWY-6964	ammonia assimilation cycle II
AT984_RS08225	PWY-5194	siroheme biosynthesis
AT984_RS08225	PWY-5441	S-methyl-L-methionine cycle
AT984_RS08225	PWY-702	L-methionine biosynthesis II
AT984_RS08225	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AT984_RS08255	PWY-3781	aerobic respiration I (cytochrome c)
AT984_RS08255	PWY-4521	arsenite oxidation I (respiratory)
AT984_RS08255	PWY-6692	Fe(II) oxidation
AT984_RS08255	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AT984_RS08295	PWY-6748	nitrate reduction VII (denitrification)
AT984_RS08295	PWY-7084	nitrifier denitrification
AT984_RS08385	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AT984_RS08385	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS08385	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS08385	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AT984_RS08385	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AT984_RS08385	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AT984_RS08420	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS08440	PWY-6700	queuosine biosynthesis
AT984_RS08480	PWY-2781	<i>cis</i>-zeatin biosynthesis
AT984_RS08550	PWY-3841	folate transformations II
AT984_RS08550	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS08550	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS08550	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AT984_RS08550	PWY-7199	pyrimidine deoxyribonucleosides salvage
AT984_RS08550	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AT984_RS08555	PWY-3841	folate transformations II
AT984_RS08555	PWY-6614	tetrahydrofolate biosynthesis
AT984_RS08600	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AT984_RS08600	PWY-2161	folate polyglutamylation
AT984_RS08600	PWY-2201	folate transformations I
AT984_RS08600	PWY-3841	folate transformations II
AT984_RS08645	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AT984_RS08645	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AT984_RS08645	PWY-5989	stearate biosynthesis II (bacteria and plants)
AT984_RS08645	PWY-6113	superpathway of mycolate biosynthesis
AT984_RS08645	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AT984_RS08645	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AT984_RS08645	PWY-7663	gondoate biosynthesis (anaerobic)
AT984_RS08645	PWY-7664	oleate biosynthesis IV (anaerobic)
AT984_RS08645	PWYG-321	mycolate biosynthesis
AT984_RS08680	PWY-5674	nitrate reduction IV (dissimilatory)
AT984_RS08755	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AT984_RS08760	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AT984_RS08760	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AT984_RS08935	PWY-6700	queuosine biosynthesis
AT984_RS09025	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AT984_RS09035	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AT984_RS09035	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AT984_RS09035	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AT984_RS09035	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AT984_RS09050	PWY-2161	folate polyglutamylation
AT984_RS09055	PWY-4381	fatty acid biosynthesis initiation I
AT984_RS09055	PWY-5743	3-hydroxypropanoate cycle
AT984_RS09055	PWY-5744	glyoxylate assimilation
AT984_RS09055	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AT984_RS09055	PWY-6679	jadomycin biosynthesis
AT984_RS09055	PWY-6722	candicidin biosynthesis
AT984_RS09055	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AT984_RS09085	PWY-2941	L-lysine biosynthesis II
AT984_RS09085	PWY-2942	L-lysine biosynthesis III
AT984_RS09085	PWY-5097	L-lysine biosynthesis VI
AT984_RS09085	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AT984_RS09085	PWY-6559	spermidine biosynthesis II
AT984_RS09085	PWY-6562	norspermidine biosynthesis
AT984_RS09085	PWY-7153	grixazone biosynthesis
AT984_RS09085	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AT984_RS09090	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AT984_RS09130	PWY-4381	fatty acid biosynthesis initiation I
AT984_RS09130	PWY-5743	3-hydroxypropanoate cycle
AT984_RS09130	PWY-5744	glyoxylate assimilation
AT984_RS09130	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AT984_RS09130	PWY-6679	jadomycin biosynthesis
AT984_RS09130	PWY-6722	candicidin biosynthesis
AT984_RS09130	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AT984_RS09185	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AT984_RS09185	PWY-7688	AT984_RS09185
AT984_RS09190	PWY-1042	glycolysis IV (plant cytosol)
AT984_RS09190	PWY-1622	formaldehyde assimilation I (serine pathway)
AT984_RS09190	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AT984_RS09190	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS09190	PWY-5723	Rubisco shunt
AT984_RS09190	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AT984_RS09190	PWY-6143	CMP-pseudaminate biosynthesis
AT984_RS09190	PWY-6886	1-butanol autotrophic biosynthesis
AT984_RS09190	PWY-6901	superpathway of glucose and xylose degradation
AT984_RS09190	PWY-7003	glycerol degradation to butanol
AT984_RS09190	PWY-7124	ethylene biosynthesis V (engineered)
AT984_RS09190	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AT984_RS09190	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
AT984_RS09190	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
AT984_RS09190	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
AT984_RS09190	PWY-7719	AT984_RS09190
AT984_RS09205	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AT984_RS09230	PWY-6143	CMP-pseudaminate biosynthesis
AT984_RS09240	PWY-4381	fatty acid biosynthesis initiation I
AT984_RS09335	PWY-7183	pyrimidine nucleobases salvage I
AT984_RS09360	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AT984_RS09360	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AT984_RS09360	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AT984_RS09400	PWY-3781	aerobic respiration I (cytochrome c)
AT984_RS09400	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AT984_RS09400	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AT984_RS09400	PWY-5690	TCA cycle II (plants and fungi)
AT984_RS09400	PWY-6728	methylaspartate cycle
AT984_RS09400	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS09400	PWY-7254	TCA cycle VII (acetate-producers)
AT984_RS09400	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AT984_RS09405	PWY-3781	aerobic respiration I (cytochrome c)
AT984_RS09405	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AT984_RS09405	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AT984_RS09405	PWY-5690	TCA cycle II (plants and fungi)
AT984_RS09405	PWY-6728	methylaspartate cycle
AT984_RS09405	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS09405	PWY-7254	TCA cycle VII (acetate-producers)
AT984_RS09405	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AT984_RS09425	PWY-1622	formaldehyde assimilation I (serine pathway)
AT984_RS09425	PWY-5392	reductive TCA cycle II
AT984_RS09425	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AT984_RS09425	PWY-5690	TCA cycle II (plants and fungi)
AT984_RS09425	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS09425	PWY-6728	methylaspartate cycle
AT984_RS09425	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS09425	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AT984_RS09425	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AT984_RS09450	PWY-5747	2-methylcitrate cycle II
AT984_RS09555	PWY-4381	fatty acid biosynthesis initiation I
AT984_RS09580	PWY-3801	sucrose degradation II (sucrose synthase)
AT984_RS09580	PWY-6527	stachyose degradation
AT984_RS09580	PWY-7238	sucrose biosynthesis II
AT984_RS09580	PWY-7343	UDP-glucose biosynthesis
AT984_RS09595	PWY-6936	seleno-amino acid biosynthesis
AT984_RS09815	PWY-6825	phosphatidylcholine biosynthesis V
AT984_RS09825	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AT984_RS09825	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AT984_RS09905	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AT984_RS09905	PWY-5723	Rubisco shunt
AT984_RS09920	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AT984_RS09920	PWY-6164	3-dehydroquinate biosynthesis I
AT984_RS09920	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AT984_RS09925	PWY-5686	UMP biosynthesis
AT984_RS09990	PWY-2941	L-lysine biosynthesis II
AT984_RS09990	PWY-2942	L-lysine biosynthesis III
AT984_RS09990	PWY-5097	L-lysine biosynthesis VI
AT984_RS10035	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AT984_RS10035	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS10035	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS10035	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AT984_RS10055	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AT984_RS10060	PWY-4202	arsenate detoxification I (glutaredoxin)
AT984_RS10060	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AT984_RS10060	PWY-6608	guanosine nucleotides degradation III
AT984_RS10060	PWY-6609	adenine and adenosine salvage III
AT984_RS10060	PWY-6611	adenine and adenosine salvage V
AT984_RS10060	PWY-6620	guanine and guanosine salvage
AT984_RS10060	PWY-6627	salinosporamide A biosynthesis
AT984_RS10060	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AT984_RS10060	PWY-7179	purine deoxyribonucleosides degradation I
AT984_RS10060	PWY-7179-1	purine deoxyribonucleosides degradation
AT984_RS10065	PWY-6556	pyrimidine ribonucleosides salvage II
AT984_RS10065	PWY-7181	pyrimidine deoxyribonucleosides degradation
AT984_RS10065	PWY-7193	pyrimidine ribonucleosides salvage I
AT984_RS10065	PWY-7199	pyrimidine deoxyribonucleosides salvage
AT984_RS10180	PWY-6829	tRNA methylation (yeast)
AT984_RS10180	PWY-7285	methylwyosine biosynthesis
AT984_RS10180	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AT984_RS10220	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AT984_RS10220	PWY-6148	tetrahydromethanopterin biosynthesis
AT984_RS10220	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AT984_RS10220	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AT984_RS10275	PWY-4981	L-proline biosynthesis II (from arginine)
AT984_RS10275	PWY-4984	urea cycle
AT984_RS10275	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AT984_RS10315	PWY-5941	glycogen degradation II (eukaryotic)
AT984_RS10315	PWY-6724	starch degradation II
AT984_RS10315	PWY-6737	starch degradation V
AT984_RS10315	PWY-7238	sucrose biosynthesis II
AT984_RS10330	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AT984_RS10330	PWY-622	starch biosynthesis
AT984_RS10335	PWY-5941	glycogen degradation II (eukaryotic)
AT984_RS10335	PWY-6731	starch degradation III
AT984_RS10335	PWY-6737	starch degradation V
AT984_RS10335	PWY-7238	sucrose biosynthesis II
AT984_RS10375	PWY-2722	trehalose degradation IV
AT984_RS10375	PWY-2723	trehalose degradation V
AT984_RS10375	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AT984_RS10375	PWY-5661	GDP-glucose biosynthesis
AT984_RS10375	PWY-621	sucrose degradation III (sucrose invertase)
AT984_RS10375	PWY-7238	sucrose biosynthesis II
AT984_RS10375	PWY-7385	1,3-propanediol biosynthesis (engineered)
AT984_RS10380	PWY-2722	trehalose degradation IV
AT984_RS10380	PWY-2723	trehalose degradation V
AT984_RS10380	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AT984_RS10380	PWY-5661	GDP-glucose biosynthesis
AT984_RS10380	PWY-621	sucrose degradation III (sucrose invertase)
AT984_RS10380	PWY-7238	sucrose biosynthesis II
AT984_RS10380	PWY-7385	1,3-propanediol biosynthesis (engineered)
AT984_RS10510	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AT984_RS10510	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AT984_RS10510	PWY-7717	AT984_RS10510
AT984_RS10510	PWY-7733	AT984_RS10510
AT984_RS10510	PWY-7734	AT984_RS10510
AT984_RS10515	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AT984_RS10515	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AT984_RS10555	PWY-2582	brassinosteroid biosynthesis II
AT984_RS10555	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AT984_RS10555	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AT984_RS10555	PWY-6948	sitosterol degradation to androstenedione
AT984_RS10555	PWY-699	brassinosteroid biosynthesis I
AT984_RS10555	PWY-7299	progesterone biosynthesis
AT984_RS10595	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AT984_RS10685	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AT984_RS10940	PWY-5958	acridone alkaloid biosynthesis
AT984_RS10940	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AT984_RS10940	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AT984_RS10955	PWY-7158	L-phenylalanine degradation V
AT984_RS11030	PWY-4983	L-citrulline-nitric oxide cycle
AT984_RS11030	PWY-4984	urea cycle
AT984_RS11030	PWY-5	canavanine biosynthesis
AT984_RS11030	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AT984_RS11030	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AT984_RS11045	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AT984_RS11045	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AT984_RS11090	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AT984_RS11090	PWY-6167	flavin biosynthesis II (archaea)
AT984_RS11090	PWY-6168	flavin biosynthesis III (fungi)
AT984_RS11130	PWY-723	alkylnitronates degradation
AT984_RS11205	PWY-7052	cyanophycin metabolism
AT984_RS11215	PWY-7052	cyanophycin metabolism
AT984_RS11265	PWY-2941	L-lysine biosynthesis II
AT984_RS11265	PWY-2942	L-lysine biosynthesis III
AT984_RS11265	PWY-5097	L-lysine biosynthesis VI
AT984_RS11265	PWY-6559	spermidine biosynthesis II
AT984_RS11265	PWY-6562	norspermidine biosynthesis
AT984_RS11265	PWY-7153	grixazone biosynthesis
AT984_RS11275	PWY-4381	fatty acid biosynthesis initiation I
AT984_RS11275	PWY-5743	3-hydroxypropanoate cycle
AT984_RS11275	PWY-5744	glyoxylate assimilation
AT984_RS11275	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AT984_RS11275	PWY-6679	jadomycin biosynthesis
AT984_RS11275	PWY-6722	candicidin biosynthesis
AT984_RS11275	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AT984_RS11335	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS11335	PWY-6549	L-glutamine biosynthesis III
AT984_RS11335	PWY-6728	methylaspartate cycle
AT984_RS11335	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS11335	PWY-7124	ethylene biosynthesis V (engineered)
AT984_RS11335	PWY-7254	TCA cycle VII (acetate-producers)
AT984_RS11335	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AT984_RS11340	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS11340	PWY-6549	L-glutamine biosynthesis III
AT984_RS11340	PWY-6728	methylaspartate cycle
AT984_RS11340	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS11340	PWY-7124	ethylene biosynthesis V (engineered)
AT984_RS11340	PWY-7254	TCA cycle VII (acetate-producers)
AT984_RS11340	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AT984_RS11385	PWY-3781	aerobic respiration I (cytochrome c)
AT984_RS11385	PWY-4521	arsenite oxidation I (respiratory)
AT984_RS11385	PWY-6692	Fe(II) oxidation
AT984_RS11385	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AT984_RS11390	PWY-3781	aerobic respiration I (cytochrome c)
AT984_RS11390	PWY-4521	arsenite oxidation I (respiratory)
AT984_RS11390	PWY-6692	Fe(II) oxidation
AT984_RS11390	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AT984_RS11410	PWY-6854	ethylene biosynthesis III (microbes)
AT984_RS11440	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AT984_RS11445	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS11525	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS11535	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AT984_RS11535	PWY-6596	adenosine nucleotides degradation I
AT984_RS11535	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS11625	PWY-7560	methylerythritol phosphate pathway II
AT984_RS11650	PWY-7560	methylerythritol phosphate pathway II
AT984_RS11665	PWY-2201	folate transformations I
AT984_RS11720	PWY-5316	nicotine biosynthesis
AT984_RS11720	PWY-7342	superpathway of nicotine biosynthesis
AT984_RS11730	PWY-5316	nicotine biosynthesis
AT984_RS11730	PWY-7342	superpathway of nicotine biosynthesis
AT984_RS11775	PWY-6823	molybdenum cofactor biosynthesis
AT984_RS11835	PWY-6902	chitin degradation II
AT984_RS11855	PWY-6834	spermidine biosynthesis III
AT984_RS11865	PWY-6823	molybdenum cofactor biosynthesis
AT984_RS11955	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AT984_RS11960	PWY-1341	phenylacetate degradation II (anaerobic)
AT984_RS11960	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AT984_RS11960	PWY-7716	AT984_RS11960
AT984_RS11990	PWY-6823	molybdenum cofactor biosynthesis
AT984_RS11995	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AT984_RS11995	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AT984_RS12005	PWY-6823	molybdenum cofactor biosynthesis
AT984_RS12030	PWY-6654	phosphopantothenate biosynthesis III
AT984_RS12140	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AT984_RS12310	PWY-3781	aerobic respiration I (cytochrome c)
AT984_RS12310	PWY-6692	Fe(II) oxidation
AT984_RS12310	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AT984_RS12310	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AT984_RS12400	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS12425	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AT984_RS12425	PWY-622	starch biosynthesis
AT984_RS12435	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AT984_RS12435	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AT984_RS12435	PWY-5989	stearate biosynthesis II (bacteria and plants)
AT984_RS12435	PWY-5994	palmitate biosynthesis I (animals and fungi)
AT984_RS12435	PWY-6113	superpathway of mycolate biosynthesis
AT984_RS12435	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AT984_RS12435	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AT984_RS12435	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AT984_RS12435	PWY-7663	gondoate biosynthesis (anaerobic)
AT984_RS12435	PWY-7664	oleate biosynthesis IV (anaerobic)
AT984_RS12435	PWYG-321	mycolate biosynthesis
AT984_RS12460	PWY-7294	xylose degradation IV
AT984_RS12460	PWY-7295	L-arabinose degradation IV
AT984_RS12460	PWY-7560	methylerythritol phosphate pathway II
AT984_RS12465	PWY-5667	CDP-diacylglycerol biosynthesis I
AT984_RS12465	PWY-5981	CDP-diacylglycerol biosynthesis III
AT984_RS12500	PWY-6938	NADH repair
AT984_RS12520	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS12590	PWY-2201	folate transformations I
AT984_RS12595	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AT984_RS12595	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AT984_RS12595	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS12595	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS12595	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AT984_RS12595	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AT984_RS12595	PWY-7205	CMP phosphorylation
AT984_RS12595	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AT984_RS12595	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS12595	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS12595	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS12595	PWY-7224	purine deoxyribonucleosides salvage
AT984_RS12595	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS12595	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AT984_RS12645	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AT984_RS12645	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AT984_RS12655	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AT984_RS12660	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AT984_RS12695	PWY-723	alkylnitronates degradation
AT984_RS12715	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AT984_RS12715	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AT984_RS13065	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS13135	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AT984_RS13135	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AT984_RS13135	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AT984_RS13135	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AT984_RS13135	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AT984_RS13135	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AT984_RS13135	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AT984_RS13135	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AT984_RS13135	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AT984_RS13135	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AT984_RS13400	PWY-31	canavanine degradation
AT984_RS13400	PWY-4984	urea cycle
AT984_RS13400	PWY-6305	putrescine biosynthesis IV
AT984_RS13400	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AT984_RS13435	PWY-5028	L-histidine degradation II
AT984_RS13435	PWY-5030	L-histidine degradation III
AT984_RS13450	PWY-5028	L-histidine degradation II
AT984_RS13450	PWY-5030	L-histidine degradation III
AT984_RS13455	PWY-5028	L-histidine degradation II
AT984_RS13455	PWY-5030	L-histidine degradation III
AT984_RS13480	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AT984_RS13520	PWY-6655	xanthan biosynthesis
AT984_RS13520	PWY-6658	acetan biosynthesis
AT984_RS13530	PWY-3821	galactose degradation III
AT984_RS13530	PWY-6317	galactose degradation I (Leloir pathway)
AT984_RS13530	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AT984_RS13530	PWY-6527	stachyose degradation
AT984_RS13530	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AT984_RS13530	PWY-7344	UDP-D-galactose biosynthesis
AT984_RS13535	PWY-5659	GDP-mannose biosynthesis
AT984_RS13535	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AT984_RS13545	PWY-3221	dTDP-L-rhamnose biosynthesis II
AT984_RS13545	PWY-6808	dTDP-D-forosamine biosynthesis
AT984_RS13545	PWY-6942	dTDP-D-desosamine biosynthesis
AT984_RS13545	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AT984_RS13545	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AT984_RS13545	PWY-6974	dTDP-L-olivose biosynthesis
AT984_RS13545	PWY-6976	dTDP-L-mycarose biosynthesis
AT984_RS13545	PWY-7104	dTDP-L-megosamine biosynthesis
AT984_RS13545	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AT984_RS13545	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AT984_RS13545	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AT984_RS13545	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AT984_RS13545	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AT984_RS13545	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AT984_RS13545	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AT984_RS13545	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AT984_RS13545	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AT984_RS13545	PWY-7688	AT984_RS13545
AT984_RS13555	PWY-3221	dTDP-L-rhamnose biosynthesis II
AT984_RS13555	PWY-6808	dTDP-D-forosamine biosynthesis
AT984_RS13555	PWY-6942	dTDP-D-desosamine biosynthesis
AT984_RS13555	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AT984_RS13555	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AT984_RS13555	PWY-6974	dTDP-L-olivose biosynthesis
AT984_RS13555	PWY-6976	dTDP-L-mycarose biosynthesis
AT984_RS13555	PWY-7104	dTDP-L-megosamine biosynthesis
AT984_RS13555	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AT984_RS13555	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AT984_RS13555	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AT984_RS13555	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AT984_RS13555	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AT984_RS13555	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AT984_RS13555	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AT984_RS13555	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AT984_RS13555	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AT984_RS13555	PWY-7688	AT984_RS13555
AT984_RS13565	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AT984_RS13575	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
AT984_RS13580	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AT984_RS13580	PWY-622	starch biosynthesis
AT984_RS13590	PWY-6986	alginate degradation
AT984_RS13590	PWY-7651	heparan sulfate degradation
AT984_RS13635	PWY-5481	pyruvate fermentation to lactate
AT984_RS13635	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AT984_RS13635	PWY-6901	superpathway of glucose and xylose degradation
AT984_RS13640	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AT984_RS13640	PWY-5739	GDP-D-perosamine biosynthesis
AT984_RS13640	PWY-5740	GDP-L-colitose biosynthesis
AT984_RS13640	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AT984_RS13640	PWY-7573	GDP-mycosamine biosynthesis
AT984_RS13675	PWY-5839	menaquinol-7 biosynthesis
AT984_RS13675	PWY-5844	menaquinol-9 biosynthesis
AT984_RS13675	PWY-5849	menaquinol-6 biosynthesis
AT984_RS13675	PWY-5890	menaquinol-10 biosynthesis
AT984_RS13675	PWY-5891	menaquinol-11 biosynthesis
AT984_RS13675	PWY-5892	menaquinol-12 biosynthesis
AT984_RS13675	PWY-5895	menaquinol-13 biosynthesis
AT984_RS13705	PWY-6683	sulfate reduction III (assimilatory)
AT984_RS13720	PWY-5278	sulfite oxidation III
AT984_RS13720	PWY-5340	sulfate activation for sulfonation
AT984_RS13720	PWY-6683	sulfate reduction III (assimilatory)
AT984_RS13720	PWY-6932	selenate reduction
AT984_RS13725	PWY-5278	sulfite oxidation III
AT984_RS13725	PWY-5340	sulfate activation for sulfonation
AT984_RS13725	PWY-6683	sulfate reduction III (assimilatory)
AT984_RS13725	PWY-6932	selenate reduction
AT984_RS13730	PWY-5194	siroheme biosynthesis
AT984_RS13730	PWY-5441	S-methyl-L-methionine cycle
AT984_RS13730	PWY-702	L-methionine biosynthesis II
AT984_RS13730	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AT984_RS13740	PWY-101	photosynthesis light reactions
AT984_RS13740	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AT984_RS13825	PWY-3781	aerobic respiration I (cytochrome c)
AT984_RS13825	PWY-6692	Fe(II) oxidation
AT984_RS13825	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AT984_RS13825	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AT984_RS13840	PWY-7294	xylose degradation IV
AT984_RS13840	PWY-7295	L-arabinose degradation IV
AT984_RS13930	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AT984_RS13930	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AT984_RS14080	PWY-6123	inosine-5'-phosphate biosynthesis I
AT984_RS14080	PWY-6124	inosine-5'-phosphate biosynthesis II
AT984_RS14080	PWY-7234	inosine-5'-phosphate biosynthesis III
AT984_RS14145	PWY-2201	folate transformations I
AT984_RS14145	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS14170	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AT984_RS14170	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AT984_RS14175	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AT984_RS14175	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AT984_RS14180	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AT984_RS14180	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AT984_RS14180	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AT984_RS14180	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AT984_RS14190	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AT984_RS14190	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AT984_RS14195	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AT984_RS14195	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AT984_RS14195	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AT984_RS14200	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AT984_RS14200	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AT984_RS14220	PWY-2201	folate transformations I
AT984_RS14280	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AT984_RS14300	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AT984_RS14300	PWY-6416	quinate degradation II
AT984_RS14300	PWY-6707	gallate biosynthesis
AT984_RS14330	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AT984_RS14330	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS14330	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AT984_RS14330	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AT984_RS14330	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS14330	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS14330	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS14330	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AT984_RS14335	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AT984_RS14335	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS14335	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AT984_RS14335	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AT984_RS14335	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS14335	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS14335	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS14335	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AT984_RS14405	PWY-4381	fatty acid biosynthesis initiation I
AT984_RS14405	PWY-5743	3-hydroxypropanoate cycle
AT984_RS14405	PWY-5744	glyoxylate assimilation
AT984_RS14405	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AT984_RS14405	PWY-6679	jadomycin biosynthesis
AT984_RS14405	PWY-6722	candicidin biosynthesis
AT984_RS14405	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AT984_RS14475	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AT984_RS14520	PWY-3341	L-proline biosynthesis III
AT984_RS14520	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AT984_RS14595	PWY-6936	seleno-amino acid biosynthesis
AT984_RS14625	PWY-5686	UMP biosynthesis
AT984_RS14700	PWY-1361	benzoyl-CoA degradation I (aerobic)
AT984_RS14700	PWY-5109	2-methylbutanoate biosynthesis
AT984_RS14700	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AT984_RS14700	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AT984_RS14700	PWY-5177	glutaryl-CoA degradation
AT984_RS14700	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AT984_RS14700	PWY-6435	4-hydroxybenzoate biosynthesis V
AT984_RS14700	PWY-6583	pyruvate fermentation to butanol I
AT984_RS14700	PWY-6863	pyruvate fermentation to hexanol
AT984_RS14700	PWY-6883	pyruvate fermentation to butanol II
AT984_RS14700	PWY-6944	androstenedione degradation
AT984_RS14700	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AT984_RS14700	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AT984_RS14700	PWY-7007	methyl ketone biosynthesis
AT984_RS14700	PWY-7046	4-coumarate degradation (anaerobic)
AT984_RS14700	PWY-7094	fatty acid salvage
AT984_RS14700	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AT984_RS14700	PWY-735	jasmonic acid biosynthesis
AT984_RS14700	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AT984_RS14700	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AT984_RS14700	PWY-7726	AT984_RS14700
AT984_RS14825	PWY-3801	sucrose degradation II (sucrose synthase)
AT984_RS14825	PWY-5054	sorbitol biosynthesis I
AT984_RS14825	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AT984_RS14825	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AT984_RS14825	PWY-5659	GDP-mannose biosynthesis
AT984_RS14825	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AT984_RS14825	PWY-621	sucrose degradation III (sucrose invertase)
AT984_RS14825	PWY-622	starch biosynthesis
AT984_RS14825	PWY-6981	chitin biosynthesis
AT984_RS14825	PWY-6992	1,5-anhydrofructose degradation
AT984_RS14825	PWY-7238	sucrose biosynthesis II
AT984_RS14825	PWY-7347	sucrose biosynthesis III
AT984_RS14825	PWY-7385	1,3-propanediol biosynthesis (engineered)
AT984_RS14830	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AT984_RS14830	PWY-5723	Rubisco shunt
AT984_RS14835	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AT984_RS14945	PWY-6164	3-dehydroquinate biosynthesis I
AT984_RS14950	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AT984_RS15050	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AT984_RS15050	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AT984_RS15050	PWY-6269	adenosylcobalamin salvage from cobinamide II
AT984_RS15115	PWY-5381	pyridine nucleotide cycling (plants)
AT984_RS15115	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AT984_RS15115	PWY-6596	adenosine nucleotides degradation I
AT984_RS15115	PWY-6606	guanosine nucleotides degradation II
AT984_RS15115	PWY-6607	guanosine nucleotides degradation I
AT984_RS15115	PWY-6608	guanosine nucleotides degradation III
AT984_RS15115	PWY-7185	UTP and CTP dephosphorylation I
AT984_RS15200	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AT984_RS15200	PWY-6164	3-dehydroquinate biosynthesis I
AT984_RS15200	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AT984_RS15225	PWY-2201	folate transformations I
AT984_RS15260	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AT984_RS15340	PWY-1361	benzoyl-CoA degradation I (aerobic)
AT984_RS15340	PWY-5109	2-methylbutanoate biosynthesis
AT984_RS15340	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AT984_RS15340	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AT984_RS15340	PWY-5177	glutaryl-CoA degradation
AT984_RS15340	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AT984_RS15340	PWY-6435	4-hydroxybenzoate biosynthesis V
AT984_RS15340	PWY-6583	pyruvate fermentation to butanol I
AT984_RS15340	PWY-6863	pyruvate fermentation to hexanol
AT984_RS15340	PWY-6883	pyruvate fermentation to butanol II
AT984_RS15340	PWY-6944	androstenedione degradation
AT984_RS15340	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AT984_RS15340	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AT984_RS15340	PWY-7007	methyl ketone biosynthesis
AT984_RS15340	PWY-7046	4-coumarate degradation (anaerobic)
AT984_RS15340	PWY-7094	fatty acid salvage
AT984_RS15340	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AT984_RS15340	PWY-735	jasmonic acid biosynthesis
AT984_RS15340	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AT984_RS15340	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AT984_RS15340	PWY-7726	AT984_RS15340
AT984_RS15450	PWY-5392	reductive TCA cycle II
AT984_RS15450	PWY-5537	pyruvate fermentation to acetate V
AT984_RS15450	PWY-5538	pyruvate fermentation to acetate VI
AT984_RS15450	PWY-5690	TCA cycle II (plants and fungi)
AT984_RS15450	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS15450	PWY-6728	methylaspartate cycle
AT984_RS15450	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS15450	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AT984_RS15545	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AT984_RS15545	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS15545	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AT984_RS15545	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AT984_RS15545	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS15545	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AT984_RS15545	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AT984_RS15545	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AT984_RS15630	PWY-1042	glycolysis IV (plant cytosol)
AT984_RS15630	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AT984_RS15630	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS15630	PWY-7385	1,3-propanediol biosynthesis (engineered)
AT984_RS15655	PWY-5074	mevalonate degradation
AT984_RS15670	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AT984_RS15675	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AT984_RS15680	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AT984_RS15680	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AT984_RS15680	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AT984_RS15700	PWY-4381	fatty acid biosynthesis initiation I
AT984_RS15700	PWY-5743	3-hydroxypropanoate cycle
AT984_RS15700	PWY-5744	glyoxylate assimilation
AT984_RS15700	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AT984_RS15700	PWY-6679	jadomycin biosynthesis
AT984_RS15700	PWY-6722	candicidin biosynthesis
AT984_RS15700	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AT984_RS15765	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AT984_RS15780	PWY-6891	thiazole biosynthesis II (Bacillus)
AT984_RS15780	PWY-6892	thiazole biosynthesis I (E. coli)
AT984_RS15785	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AT984_RS15785	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AT984_RS15785	PWY-6897	thiamin salvage II
AT984_RS15785	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AT984_RS15785	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AT984_RS15785	PWY-7356	thiamin salvage IV (yeast)
AT984_RS15785	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AT984_RS15895	PWY-3961	phosphopantothenate biosynthesis II
AT984_RS16045	PWY-6902	chitin degradation II
AT984_RS16065	PWY-6617	adenosine nucleotides degradation III
AT984_RS16115	PWY-1361	benzoyl-CoA degradation I (aerobic)
AT984_RS16115	PWY-2361	3-oxoadipate degradation
AT984_RS16115	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AT984_RS16125	PWY-1361	benzoyl-CoA degradation I (aerobic)
AT984_RS16125	PWY-5109	2-methylbutanoate biosynthesis
AT984_RS16125	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AT984_RS16125	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AT984_RS16125	PWY-5177	glutaryl-CoA degradation
AT984_RS16125	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AT984_RS16125	PWY-6435	4-hydroxybenzoate biosynthesis V
AT984_RS16125	PWY-6583	pyruvate fermentation to butanol I
AT984_RS16125	PWY-6863	pyruvate fermentation to hexanol
AT984_RS16125	PWY-6883	pyruvate fermentation to butanol II
AT984_RS16125	PWY-6944	androstenedione degradation
AT984_RS16125	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AT984_RS16125	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AT984_RS16125	PWY-7007	methyl ketone biosynthesis
AT984_RS16125	PWY-7046	4-coumarate degradation (anaerobic)
AT984_RS16125	PWY-7094	fatty acid salvage
AT984_RS16125	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AT984_RS16125	PWY-735	jasmonic acid biosynthesis
AT984_RS16125	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AT984_RS16125	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AT984_RS16125	PWY-7726	AT984_RS16125
AT984_RS16140	PWY-1881	formate oxidation to CO<sub>2</sub>
AT984_RS16140	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS16140	PWY-6696	oxalate degradation III
AT984_RS16215	PWY-6167	flavin biosynthesis II (archaea)
AT984_RS16215	PWY-6168	flavin biosynthesis III (fungi)
AT984_RS16230	PWY-6654	phosphopantothenate biosynthesis III
AT984_RS16260	PWY-5386	methylglyoxal degradation I
AT984_RS16300	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AT984_RS16300	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AT984_RS16300	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AT984_RS16335	PWY-6825	phosphatidylcholine biosynthesis V
AT984_RS16340	PWY-5663	tetrahydrobiopterin biosynthesis I
AT984_RS16340	PWY-5664	tetrahydrobiopterin biosynthesis II
AT984_RS16340	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AT984_RS16340	PWY-6703	preQ<sub>0</sub> biosynthesis
AT984_RS16340	PWY-6983	tetrahydrobiopterin biosynthesis III
AT984_RS16340	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AT984_RS16355	PWY-6703	preQ<sub>0</sub> biosynthesis
AT984_RS16365	PWY-3341	L-proline biosynthesis III
AT984_RS16365	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AT984_RS16455	PWY-1042	glycolysis IV (plant cytosol)
AT984_RS16455	PWY-5484	glycolysis II (from fructose 6-phosphate)
AT984_RS16455	PWY-6901	superpathway of glucose and xylose degradation
AT984_RS16455	PWY-7003	glycerol degradation to butanol
AT984_RS16465	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AT984_RS16465	PWY-5723	Rubisco shunt
AT984_RS16465	PWY-6891	thiazole biosynthesis II (Bacillus)
AT984_RS16465	PWY-6892	thiazole biosynthesis I (E. coli)
AT984_RS16465	PWY-6901	superpathway of glucose and xylose degradation
AT984_RS16465	PWY-7560	methylerythritol phosphate pathway II
AT984_RS16635	PWY-2941	L-lysine biosynthesis II
AT984_RS16635	PWY-2942	L-lysine biosynthesis III
AT984_RS16635	PWY-5097	L-lysine biosynthesis VI
AT984_RS16680	PWY-5269	cardiolipin biosynthesis II
AT984_RS16680	PWY-5668	cardiolipin biosynthesis I
AT984_RS16685	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AT984_RS16685	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AT984_RS16685	PWY-6896	thiamin salvage I
AT984_RS16685	PWY-6897	thiamin salvage II
AT984_RS16705	PWY-1281	sulfoacetaldehyde degradation I
AT984_RS16705	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AT984_RS16705	PWY-5482	pyruvate fermentation to acetate II
AT984_RS16705	PWY-5485	pyruvate fermentation to acetate IV
AT984_RS16705	PWY-5497	purine nucleobases degradation II (anaerobic)
AT984_RS16705	PWY-6637	sulfolactate degradation II
AT984_RS16705	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AT984_RS16805	PWY-5344	L-homocysteine biosynthesis
AT984_RS16880	PWY-6123	inosine-5'-phosphate biosynthesis I
AT984_RS16880	PWY-6124	inosine-5'-phosphate biosynthesis II
AT984_RS16880	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS16880	PWY-7234	inosine-5'-phosphate biosynthesis III
AT984_RS16905	PWY-5686	UMP biosynthesis
AT984_RS17010	PWY-6728	methylaspartate cycle
AT984_RS17010	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS17010	PWY-7118	chitin degradation to ethanol
AT984_RS17010	PWY-7294	xylose degradation IV
AT984_RS17010	PWY-7295	L-arabinose degradation IV
AT984_RS17075	PWY-6825	phosphatidylcholine biosynthesis V
AT984_RS17080	PWY-2201	folate transformations I
AT984_RS17445	PWY-4202	arsenate detoxification I (glutaredoxin)
AT984_RS17445	PWY-4621	arsenate detoxification II (glutaredoxin)
AT984_RS17515	PWY-5686	UMP biosynthesis
AT984_RS17530	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AT984_RS17595	PWY-5392	reductive TCA cycle II
AT984_RS17595	PWY-5537	pyruvate fermentation to acetate V
AT984_RS17595	PWY-5538	pyruvate fermentation to acetate VI
AT984_RS17595	PWY-5690	TCA cycle II (plants and fungi)
AT984_RS17595	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS17595	PWY-6728	methylaspartate cycle
AT984_RS17595	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS17595	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AT984_RS17600	PWY-5392	reductive TCA cycle II
AT984_RS17600	PWY-5537	pyruvate fermentation to acetate V
AT984_RS17600	PWY-5538	pyruvate fermentation to acetate VI
AT984_RS17600	PWY-5690	TCA cycle II (plants and fungi)
AT984_RS17600	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS17600	PWY-6728	methylaspartate cycle
AT984_RS17600	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AT984_RS17600	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AT984_RS17675	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AT984_RS17675	PWY-7494	choline degradation IV
AT984_RS17700	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
AT984_RS17715	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AT984_RS17715	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AT984_RS17920	PWY-5669	phosphatidylethanolamine biosynthesis I
AT984_RS17980	PWY-6840	homoglutathione biosynthesis
AT984_RS17980	PWY-7255	ergothioneine biosynthesis I (bacteria)
AT984_RS17995	PWY-6605	adenine and adenosine salvage II
AT984_RS17995	PWY-6610	adenine and adenosine salvage IV
AT984_RS18200	PWY-6012	acyl carrier protein metabolism I
AT984_RS18200	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AT984_RS18450	PWY-7255	ergothioneine biosynthesis I (bacteria)
AT984_RS18465	PWY-6703	preQ<sub>0</sub> biosynthesis
AT984_RS18530	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AT984_RS18530	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AT984_RS18530	PWY-6268	adenosylcobalamin salvage from cobalamin
AT984_RS18530	PWY-6269	adenosylcobalamin salvage from cobinamide II
AT984_RS18580	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AT984_RS18580	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AT984_RS18760	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AT984_RS18760	PWY-6853	ethylene biosynthesis II (microbes)
AT984_RS18760	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AT984_RS18800	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AT984_RS18800	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AT984_RS18870	PWY-5692	allantoin degradation to glyoxylate II
AT984_RS18870	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AT984_RS19030	PWY-5647	2-nitrobenzoate degradation I
AT984_RS19030	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AT984_RS19030	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AT984_RS19030	PWY-6505	L-tryptophan degradation XII (Geobacillus)
AT984_RS19055	PWY-3341	L-proline biosynthesis III
AT984_RS19055	PWY-4981	L-proline biosynthesis II (from arginine)
AT984_RS19055	PWY-6344	L-ornithine degradation II (Stickland reaction)
AT984_RS19120	PWY-6825	phosphatidylcholine biosynthesis V
AT984_RS19215	PWY-5506	methanol oxidation to formaldehyde IV
AT984_RS19250	PWY-6654	phosphopantothenate biosynthesis III
AT984_RS19285	PWY-6854	ethylene biosynthesis III (microbes)
AT984_RS19315	PWY-6700	queuosine biosynthesis
AT984_RS19320	PWY-5913	TCA cycle VI (obligate autotrophs)
AT984_RS19320	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AT984_RS19320	PWY-6638	sulfolactate degradation III
AT984_RS19320	PWY-6642	(<i>R</i>)-cysteate degradation
AT984_RS19320	PWY-6643	coenzyme M biosynthesis II
AT984_RS19320	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AT984_RS19320	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AT984_RS19320	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AT984_RS19370	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AT984_RS19370	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AT984_RS19385	PWY-6454	vancomycin resistance I
AT984_RS19385	PWY-6455	vancomycin resistance II
AT984_RS19405	PWY-40	putrescine biosynthesis I
AT984_RS19405	PWY-6305	putrescine biosynthesis IV
AT984_RS19475	PWY-6700	queuosine biosynthesis
AT984_RS19660	PWY-5194	siroheme biosynthesis
AT984_RS19660	PWY-5441	S-methyl-L-methionine cycle
AT984_RS19660	PWY-702	L-methionine biosynthesis II
AT984_RS19660	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AT984_RS19675	PWY-6683	sulfate reduction III (assimilatory)
AT984_RS19835	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AT984_RS19905	PWY-5642	2,4-dinitrotoluene degradation
AT984_RS19905	PWY-6373	acrylate degradation
AT984_RS19935	PWY-5316	nicotine biosynthesis
AT984_RS19935	PWY-5381	pyridine nucleotide cycling (plants)
AT984_RS19935	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AT984_RS19935	PWY-7342	superpathway of nicotine biosynthesis
AT984_RS19970	PWY-6902	chitin degradation II
AT984_RS20005	PWY-5057	L-valine degradation II
AT984_RS20005	PWY-5076	L-leucine degradation III
AT984_RS20005	PWY-5078	L-isoleucine degradation II
AT984_RS20005	PWY-5101	L-isoleucine biosynthesis II
AT984_RS20005	PWY-5103	L-isoleucine biosynthesis III
AT984_RS20005	PWY-5104	L-isoleucine biosynthesis IV
AT984_RS20005	PWY-5108	L-isoleucine biosynthesis V
AT984_RS20055	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AT984_RS20165	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AT984_RS20235	PWY-381	nitrate reduction II (assimilatory)
AT984_RS20235	PWY-5675	nitrate reduction V (assimilatory)
AT984_RS20235	PWY-6549	L-glutamine biosynthesis III
AT984_RS20235	PWY-6963	ammonia assimilation cycle I
AT984_RS20235	PWY-6964	ammonia assimilation cycle II
AT984_RS20470	PWY-5704	urea degradation II
AT984_RS20480	PWY-5704	urea degradation II
AT984_RS20485	PWY-5704	urea degradation II
AT984_RS20550	PWY-4261	glycerol degradation I
AT984_RS20555	PWY-4261	glycerol degradation I
AT984_RS20555	PWY-6118	glycerol-3-phosphate shuttle
AT984_RS20555	PWY-6952	glycerophosphodiester degradation
AT984_RS20630	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AT984_RS20630	PWY-5491	diethylphosphate degradation
AT984_RS20680	PWY-5669	phosphatidylethanolamine biosynthesis I
AT984_RS20800	PWY-5198	factor 420 biosynthesis
AT984_RS20930	PWY-2201	folate transformations I
AT984_RS20930	PWY-3841	folate transformations II
AT984_RS21030	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AT984_RS21030	PWY-3162	L-tryptophan degradation V (side chain pathway)
AT984_RS21030	PWY-5057	L-valine degradation II
AT984_RS21030	PWY-5076	L-leucine degradation III
AT984_RS21030	PWY-5078	L-isoleucine degradation II
AT984_RS21030	PWY-5079	L-phenylalanine degradation III
AT984_RS21030	PWY-5082	L-methionine degradation III
AT984_RS21030	PWY-5480	pyruvate fermentation to ethanol I
AT984_RS21030	PWY-5486	pyruvate fermentation to ethanol II
AT984_RS21030	PWY-5751	phenylethanol biosynthesis
AT984_RS21030	PWY-6313	serotonin degradation
AT984_RS21030	PWY-6333	acetaldehyde biosynthesis I
AT984_RS21030	PWY-6342	noradrenaline and adrenaline degradation
AT984_RS21030	PWY-6454	vancomycin resistance I
AT984_RS21030	PWY-6587	pyruvate fermentation to ethanol III
AT984_RS21030	PWY-6802	salidroside biosynthesis
AT984_RS21030	PWY-6871	3-methylbutanol biosynthesis
AT984_RS21030	PWY-6901	superpathway of glucose and xylose degradation
AT984_RS21030	PWY-7013	L-1,2-propanediol degradation
AT984_RS21030	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AT984_RS21030	PWY-7118	chitin degradation to ethanol
AT984_RS21030	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AT984_RS21035	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AT984_RS21170	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS21180	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AT984_RS21215	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AT984_RS21215	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AT984_RS21405	PWY-6902	chitin degradation II
AT984_RS21500	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AT984_RS21500	PWY-5723	Rubisco shunt
AT984_RS21535	PWY-6019	pseudouridine degradation
AT984_RS21645	PWY-181	photorespiration
AT984_RS21655	PWY-5958	acridone alkaloid biosynthesis
AT984_RS21655	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AT984_RS21655	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AT984_RS21660	PWY-5958	acridone alkaloid biosynthesis
AT984_RS21660	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AT984_RS21660	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AT984_RS21700	PWY-6906	chitin derivatives degradation
AT984_RS21700	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AT984_RS21700	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AT984_RS22070	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AT984_RS22070	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AT984_RS22095	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AT984_RS22095	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AT984_RS22115	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AT984_RS22115	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AT984_RS22120	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AT984_RS22120	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
