locus-tag	class	description
IHJ54_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
IHJ54_RS00010	COG0592	DNA-directed DNA polymerase activity
IHJ54_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
IHJ54_RS00035	COG0840	transmembrane signaling receptor activity
IHJ54_RS00040	COG1609	Transcriptional regulator
IHJ54_RS00045	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IHJ54_RS00050	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IHJ54_RS00055	COG1447	Phosphotransferase system cellobiose-specific component IIA
IHJ54_RS00060	COG2723	6-phospho-beta-galactosidase activity
IHJ54_RS00065	COG0561	phosphatase activity
IHJ54_RS00075	COG0747	negative chemotaxis
IHJ54_RS00080	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IHJ54_RS00095	COG0601	transmembrane transport
IHJ54_RS00100	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS00115	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
IHJ54_RS00120	COG2186	Transcriptional regulator
IHJ54_RS00125	COG3734	2-keto-3-deoxy-galactonokinase
IHJ54_RS00130	COG0800	Aldolase
IHJ54_RS00135	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS00140	COG2271	Major facilitator Superfamily
IHJ54_RS00150	COG1116	anion transmembrane transporter activity
IHJ54_RS00155	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IHJ54_RS00160	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IHJ54_RS00165	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IHJ54_RS00175	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IHJ54_RS00175	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IHJ54_RS00180	COG2723	6-phospho-beta-galactosidase activity
IHJ54_RS00190	COG0823	Involved in the tonB-independent uptake of proteins
IHJ54_RS00195	COG5645	(Lipo)protein
IHJ54_RS00200	COG0071	Belongs to the small heat shock protein (HSP20) family
IHJ54_RS00205	COG0071	Belongs to the small heat shock protein (HSP20) family
IHJ54_RS00210	COG0569	domain protein
IHJ54_RS00210	COG2985	domain, Protein
IHJ54_RS00215	COG0471	metal ion transport
IHJ54_RS00220	COG3290	protein histidine kinase activity
IHJ54_RS00225	COG4565	transcriptional regulatory protein
IHJ54_RS00240	COG3493	citrate carrier protein
IHJ54_RS00245	COG0747	negative chemotaxis
IHJ54_RS00250	COG0601	transmembrane transport
IHJ54_RS00255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS00260	COG0444	Belongs to the ABC transporter superfamily
IHJ54_RS00265	COG4608	Belongs to the ABC transporter superfamily
IHJ54_RS00300	COG3501	Rhs element vgr protein
IHJ54_RS00310	COG3977	Valine--pyruvate aminotransferase
IHJ54_RS00330	COG0028	Belongs to the TPP enzyme family
IHJ54_RS00340	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IHJ54_RS00345	COG3118	belongs to the thioredoxin family
IHJ54_RS00345	COG0457	Tetratricopeptide repeat
IHJ54_RS00350	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
IHJ54_RS00360	COG1215	transferase activity, transferring glycosyl groups
IHJ54_RS00365	COG1192	Involved in chromosome partitioning
IHJ54_RS00385	COG2194	sulfuric ester hydrolase activity
IHJ54_RS00390	COG2200	EAL domain
IHJ54_RS00390	COG2199	diguanylate cyclase activity
IHJ54_RS00395	COG1301	dicarboxylic acid transport
IHJ54_RS00400	COG0612	Peptidase, M16
IHJ54_RS00405	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IHJ54_RS00410	COG1295	ribonuclease BN
IHJ54_RS00415	COG0477	Major facilitator Superfamily
IHJ54_RS00425	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
IHJ54_RS00430	COG0425	Belongs to the sulfur carrier protein TusA family
IHJ54_RS00440	COG3714	YhhN family
IHJ54_RS00450	COG3776	membrane
IHJ54_RS00455	COG0742	ribosomal rna small subunit methyltransferase
IHJ54_RS00460	COG0552	protein localization to endoplasmic reticulum
IHJ54_RS00460	COG0552	protein localization to endoplasmic reticulum
IHJ54_RS00465	COG2884	Cell division ATP-binding protein ftsE
IHJ54_RS00470	COG2177	Part of the ABC transporter FtsEX involved in
IHJ54_RS00485	COG0683	leucine binding
IHJ54_RS00490	COG0559	Belongs to the binding-protein-dependent transport system permease family
IHJ54_RS00495	COG4177	L-phenylalanine transmembrane transporter activity
IHJ54_RS00500	COG0411	ABC transporter
IHJ54_RS00505	COG0410	ABC transporter
IHJ54_RS00510	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IHJ54_RS00515	COG0840	transmembrane signaling receptor activity
IHJ54_RS00520	COG0840	transmembrane signaling receptor activity
IHJ54_RS00525	COG0840	transmembrane signaling receptor activity
IHJ54_RS00530	COG0840	transmembrane signaling receptor activity
IHJ54_RS00535	COG2610	gluconate transmembrane transporter activity
IHJ54_RS00540	COG3622	Belongs to the hyi family
IHJ54_RS00545	COG0235	Class ii aldolase
IHJ54_RS00550	COG3395	kinase activity
IHJ54_RS00555	COG2084	Dehydrogenase
IHJ54_RS00560	COG1349	DNA-binding transcription factor activity
IHJ54_RS00575	COG1653	transport
IHJ54_RS00580	COG1175	transmembrane transport
IHJ54_RS00585	COG0395	ABC-type sugar transport system, permease component
IHJ54_RS00590	COG3842	ATPase activity
IHJ54_RS00595	COG0584	glycerophosphoryl diester phosphodiesterase
IHJ54_RS00600	COG0679	Auxin Efflux Carrier
IHJ54_RS00610	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
IHJ54_RS00625	COG2205	protein histidine kinase activity
IHJ54_RS00630	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS00635	COG3678	ATP-independent chaperone mediated protein folding
IHJ54_RS00650	COG2814	Major facilitator Superfamily
IHJ54_RS00655	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
IHJ54_RS00660	COG0205	6-phosphofructokinase activity
IHJ54_RS00665	COG0583	DNA-binding transcription factor activity
IHJ54_RS00705	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IHJ54_RS00710	COG1116	anion transmembrane transporter activity
IHJ54_RS00715	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IHJ54_RS00720	COG2957	Belongs to the agmatine deiminase family
IHJ54_RS00725	COG0149	triose-phosphate isomerase activity
IHJ54_RS00735	COG3152	Membrane
IHJ54_RS00745	COG1494	fructose-1,6-bisphosphatase
IHJ54_RS00755	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
IHJ54_RS00760	COG3074	FtsZ-dependent cytokinesis
IHJ54_RS00765	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
IHJ54_RS00770	COG1575	Belongs to the MenA family. Type 1 subfamily
IHJ54_RS00775	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
IHJ54_RS00780	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
IHJ54_RS00785	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
IHJ54_RS00790	COG1609	Transcriptional regulator
IHJ54_RS00795	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IHJ54_RS00800	COG0254	rRNA binding
IHJ54_RS00805	COG1598	PFAM Uncharacterised protein family UPF0150
IHJ54_RS00815	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IHJ54_RS00825	COG1120	ATPase activity
IHJ54_RS00830	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
IHJ54_RS00835	COG0626	cystathionine gamma-synthase activity
IHJ54_RS00840	COG0527	aspartate kinase activity
IHJ54_RS00840	COG0460	homoserine dehydrogenase
IHJ54_RS00845	COG3842	ATPase activity
IHJ54_RS00860	COG0395	ABC-type sugar transport system, permease component
IHJ54_RS00865	COG1609	Transcriptional regulator
IHJ54_RS00870	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
IHJ54_RS00885	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IHJ54_RS00900	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IHJ54_RS00905	COG4206	TonB-dependent receptor
IHJ54_RS00910	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
IHJ54_RS00935	COG0812	UDP-N-acetylmuramate dehydrogenase activity
IHJ54_RS00940	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
IHJ54_RS00940	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
IHJ54_RS00945	COG1072	(Pantothenic acid kinase))
IHJ54_RS00985	COG0250	Participates in transcription elongation, termination and antitermination
IHJ54_RS00990	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
IHJ54_RS00995	COG0081	regulation of translation
IHJ54_RS01000	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
IHJ54_RS01005	COG0222	ribosome binding
IHJ54_RS01010	COG0085	RNA polymerase activity
IHJ54_RS01015	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IHJ54_RS01020	COG0477	Major facilitator Superfamily
IHJ54_RS01025	COG5457	Domain of unknown function (DUF1127)
IHJ54_RS01030	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IHJ54_RS01040	COG2022	thiamine diphosphate biosynthetic process
IHJ54_RS01045	COG2104	thiamine diphosphate biosynthetic process
IHJ54_RS01050	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
IHJ54_RS01055	COG0352	thiamine-phosphate diphosphorylase activity
IHJ54_RS01060	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
IHJ54_RS01065	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
IHJ54_RS01070	COG2816	NAD+ diphosphatase activity
IHJ54_RS01075	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
IHJ54_RS01080	COG1515	deoxyribonuclease V activity
IHJ54_RS01100	COG0151	Belongs to the GarS family
IHJ54_RS01105	COG0138	bifunctional purine biosynthesis protein purh
IHJ54_RS01135	COG1126	abc transporter atp-binding protein
IHJ54_RS01140	COG0765	amino acid transport
IHJ54_RS01145	COG4597	amino acid ABC transporter
IHJ54_RS01150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IHJ54_RS01155	COG0765	amino acid transport
IHJ54_RS01160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IHJ54_RS01175	COG2226	methyltransferase
IHJ54_RS01185	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
IHJ54_RS01200	COG2264	protein methyltransferase activity
IHJ54_RS01205	COG4145	pantothenate transmembrane transporter activity
IHJ54_RS01210	COG3924	membrane
IHJ54_RS01220	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
IHJ54_RS01225	COG2207	Transcriptional regulator
IHJ54_RS01230	COG0439	Biotin carboxylase
IHJ54_RS01235	COG0511	ligase activity, forming carbon-carbon bonds
IHJ54_RS01240	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
IHJ54_RS01245	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
IHJ54_RS01250	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
IHJ54_RS01255	COG0604	alcohol dehydrogenase
IHJ54_RS01260	COG2199	diguanylate cyclase activity
IHJ54_RS01260	COG2200	EAL domain
IHJ54_RS01265	COG1077	Cell shape determining protein MreB Mrl
IHJ54_RS01270	COG1792	Involved in formation and maintenance of cell shape
IHJ54_RS01275	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
IHJ54_RS01280	COG0424	maF-like protein
IHJ54_RS01285	COG1530	ribonuclease E activity
IHJ54_RS01290	COG3164	Protein of unknown function
IHJ54_RS01295	COG0312	modulator of DNA gyrase
IHJ54_RS01300	COG0583	DNA-binding transcription factor activity
IHJ54_RS01310	COG1566	PFAM secretion protein HlyD family protein
IHJ54_RS01315	COG1289	transmembrane transporter activity
IHJ54_RS01325	COG3028	Belongs to the UPF0307 family
IHJ54_RS01330	COG0312	modulator of DNA gyrase
IHJ54_RS01335	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
IHJ54_RS01340	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IHJ54_RS01345	COG1660	Displays ATPase and GTPase activities
IHJ54_RS01350	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IHJ54_RS01355	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
IHJ54_RS01360	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
IHJ54_RS01365	COG1137	ATPase activity
IHJ54_RS01370	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
IHJ54_RS01375	COG3117	lipopolysaccharide transmembrane transporter activity
IHJ54_RS01380	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
IHJ54_RS01385	COG0517	IMP dehydrogenase activity
IHJ54_RS01385	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
IHJ54_RS01390	COG0530	calcium, potassium:sodium antiporter activity
IHJ54_RS01395	COG1127	ABC transporter
IHJ54_RS01400	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
IHJ54_RS01405	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IHJ54_RS01410	COG2854	intermembrane phospholipid transfer
IHJ54_RS01415	COG3113	response to antibiotic
IHJ54_RS01420	COG5007	Belongs to the BolA IbaG family
IHJ54_RS01425	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
IHJ54_RS01430	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IHJ54_RS01435	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IHJ54_RS01440	COG3105	Protein conserved in bacteria
IHJ54_RS01445	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
IHJ54_RS01450	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
IHJ54_RS01455	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
IHJ54_RS01460	COG0625	glutathione transferase activity
IHJ54_RS01465	COG2969	positive regulation of protein catabolic process
IHJ54_RS01475	COG0493	'glutamate synthase
IHJ54_RS01480	COG0067	glutamate synthase
IHJ54_RS01480	COG0069	glutamate synthase activity
IHJ54_RS01480	COG0070	glutamate synthase
IHJ54_RS01485	COG1242	4 iron, 4 sulfur cluster binding
IHJ54_RS01490	COG0784	Response regulator, receiver
IHJ54_RS01490	COG2198	Histidine kinase
IHJ54_RS01490	COG5002	protein histidine kinase activity
IHJ54_RS01495	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
IHJ54_RS01500	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IHJ54_RS01510	COG2823	Periplasmic or secreted lipoprotein
IHJ54_RS01515	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
IHJ54_RS01520	COG0792	nuclease activity
IHJ54_RS01525	COG3107	peptidoglycan biosynthetic process
IHJ54_RS01530	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
IHJ54_RS01540	COG3385	transposase activity
IHJ54_RS01555	COG3384	dioxygenase
IHJ54_RS01560	COG0754	glutathionylspermidine amidase activity
IHJ54_RS01565	COG5463	Belongs to the UPF0441 family
IHJ54_RS01575	COG0494	nUDIX hydrolase
IHJ54_RS01580	COG3151	Protein conserved in bacteria
IHJ54_RS01585	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
IHJ54_RS01590	COG3150	esterase
IHJ54_RS01595	COG0187	DNA topoisomerase II activity
IHJ54_RS01600	COG0583	DNA-binding transcription factor activity
IHJ54_RS01605	COG2249	NAD(P)H dehydrogenase (quinone) activity
IHJ54_RS01620	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IHJ54_RS01620	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IHJ54_RS01625	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IHJ54_RS01630	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IHJ54_RS01630	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IHJ54_RS01630	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IHJ54_RS01635	COG3711	transcriptional antiterminator
IHJ54_RS01640	COG4771	TonB-dependent receptor
IHJ54_RS01640	COG1629	transport
IHJ54_RS01650	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
IHJ54_RS01655	COG0204	Acyl-transferase
IHJ54_RS01660	COG2132	Multicopper oxidase
IHJ54_RS01665	COG2188	Transcriptional regulator
IHJ54_RS01670	COG0656	L-ascorbic acid biosynthetic process
IHJ54_RS01675	COG1979	alcohol dehydrogenase
IHJ54_RS01680	COG0778	Nitroreductase
IHJ54_RS01685	COG2207	Transcriptional regulator
IHJ54_RS01690	COG0586	Pfam SNARE associated Golgi protein
IHJ54_RS01695	COG0626	cystathionine gamma-synthase activity
IHJ54_RS01710	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
IHJ54_RS01720	COG0848	biopolymer transport protein
IHJ54_RS01755	COG1203	CRISPR-associated helicase, Cas3
IHJ54_RS01775	COG1857	crispr-associated protein
IHJ54_RS01790	COG1518	maintenance of DNA repeat elements
IHJ54_RS01795	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IHJ54_RS01805	COG0076	glutamate decarboxylase activity
IHJ54_RS01810	COG2814	Major facilitator Superfamily
IHJ54_RS01820	COG3787	Belongs to the UPF0306 family
IHJ54_RS01825	COG0702	epimerase
IHJ54_RS01845	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
IHJ54_RS01850	COG0540	Belongs to the ATCase OTCase family
IHJ54_RS01855	COG2731	YhcH YjgK YiaL family protein
IHJ54_RS01860	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
IHJ54_RS01880	COG0501	Belongs to the peptidase M48B family
IHJ54_RS01885	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
IHJ54_RS01890	COG0840	transmembrane signaling receptor activity
IHJ54_RS01895	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
IHJ54_RS01900	COG0525	valine-tRNA ligase activity
IHJ54_RS01905	COG2927	DNA polymerase III (CHI subunit)
IHJ54_RS01910	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
IHJ54_RS01915	COG0795	lipopolysaccharide-transporting ATPase activity
IHJ54_RS01920	COG0795	lipopolysaccharide-transporting ATPase activity
IHJ54_RS01950	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
IHJ54_RS01955	COG0514	ATP-dependent DNA helicase (RecQ)
IHJ54_RS01990	COG0720	synthase
IHJ54_RS02030	COG1262	PFAM Formylglycine-generating sulfatase enzyme
IHJ54_RS02040	COG1136	(ABC) transporter
IHJ54_RS02070	COG2304	oxidoreductase activity
IHJ54_RS02075	COG2850	peptidyl-arginine hydroxylation
IHJ54_RS02095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IHJ54_RS02110	COG0583	DNA-binding transcription factor activity
IHJ54_RS02135	COG4650	regulator
IHJ54_RS02140	COG1690	Belongs to the RtcB family
IHJ54_RS02145	COG3541	Predicted nucleotidyltransferase
IHJ54_RS02175	COG0659	secondary active sulfate transmembrane transporter activity
IHJ54_RS02180	COG0288	reversible hydration of carbon dioxide
IHJ54_RS02185	COG0840	transmembrane signaling receptor activity
IHJ54_RS02195	COG0840	transmembrane signaling receptor activity
IHJ54_RS02200	COG3254	rhamnose metabolic process
IHJ54_RS02205	COG0235	Class ii aldolase
IHJ54_RS02210	COG4806	L-rhamnose isomerase
IHJ54_RS02215	COG1070	Carbohydrate kinase
IHJ54_RS02220	COG2169	Transcriptional regulator
IHJ54_RS02220	COG1917	Cupin 2, conserved barrel domain protein
IHJ54_RS02225	COG1917	Cupin 2, conserved barrel domain protein
IHJ54_RS02225	COG4977	sequence-specific DNA binding
IHJ54_RS02240	COG4115	mRNA cleavage
IHJ54_RS02245	COG2161	toxin-antitoxin pair type II binding
IHJ54_RS02255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS02260	COG0601	transmembrane transport
IHJ54_RS02265	COG0747	negative chemotaxis
IHJ54_RS02270	COG3477	response to acidic pH
IHJ54_RS02285	COG2862	Uncharacterized protein family, UPF0114
IHJ54_RS02290	COG2130	NADP-dependent
IHJ54_RS02310	COG3157	Type VI secretion system effector, Hcp
IHJ54_RS02315	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IHJ54_RS02320	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IHJ54_RS02325	COG0006	proline dipeptidase activity
IHJ54_RS02330	COG3079	Belongs to the UPF0149 family
IHJ54_RS02335	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
IHJ54_RS02345	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
IHJ54_RS02360	COG0560	Phosphoserine phosphatase
IHJ54_RS02365	COG3726	membrane protein affecting hemolysin expression
IHJ54_RS02375	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
IHJ54_RS02380	COG2823	Periplasmic or secreted lipoprotein
IHJ54_RS02385	COG5487	UPF0391 membrane protein
IHJ54_RS02395	COG0084	hydrolase, TatD family'
IHJ54_RS02400	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IHJ54_RS02410	COG4771	TonB-dependent receptor
IHJ54_RS02420	COG1169	isochorismate synthase
IHJ54_RS02425	COG1021	2,3-dihydroxybenzoate-AMP ligase
IHJ54_RS02430	COG3433	isochorismatase activity
IHJ54_RS02430	COG1535	isochorismatase
IHJ54_RS02435	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IHJ54_RS02440	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS02450	COG3321	synthase
IHJ54_RS02450	COG0318	PFAM AMP-dependent synthetase and ligase
IHJ54_RS02450	COG0300	oxidoreductase activity
IHJ54_RS02450	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IHJ54_RS02450	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS02465	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
IHJ54_RS02465	COG0028	Belongs to the TPP enzyme family
IHJ54_RS02475	COG3624	Phosphonate C-P lyase system protein PhnG
IHJ54_RS02480	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
IHJ54_RS02485	COG3626	phosphonate metabolism
IHJ54_RS02490	COG3627	carbon phosphorus lyase activity
IHJ54_RS02495	COG4107	phosphonate C-P lyase system protein PhnK
IHJ54_RS02500	COG4778	phosphonate C-P lyase system protein PhnL
IHJ54_RS02505	COG3454	Phosphonate metabolism
IHJ54_RS02510	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
IHJ54_RS02515	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
IHJ54_RS02535	COG3423	Transcriptional regulator
IHJ54_RS02540	COG3385	transposase activity
IHJ54_RS02550	COG0464	growth
IHJ54_RS02575	COG0582	viral genome integration into host DNA
IHJ54_RS02595	COG1309	transcriptional regulator
IHJ54_RS02600	COG4232	protein-disulfide reductase activity
IHJ54_RS02605	COG1324	tolerance protein
IHJ54_RS02610	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
IHJ54_RS02625	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
IHJ54_RS02630	COG0459	protein refolding
IHJ54_RS02635	COG3161	chorismate lyase activity
IHJ54_RS02640	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
IHJ54_RS02645	COG2937	Belongs to the GPAT DAPAT family
IHJ54_RS02650	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
IHJ54_RS02655	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IHJ54_RS02660	COG3237	CsbD-like
IHJ54_RS02665	COG0735	belongs to the Fur family
IHJ54_RS02670	COG1741	Belongs to the pirin family
IHJ54_RS02675	COG0583	DNA-binding transcription factor activity
IHJ54_RS02680	COG0435	Glutathione S-transferase
IHJ54_RS02685	COG2259	Doxx family
IHJ54_RS02695	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
IHJ54_RS02700	COG4575	ribosome binding
IHJ54_RS02705	COG1422	Protein of unknown function (DUF1090)
IHJ54_RS02715	COG0586	Pfam SNARE associated Golgi protein
IHJ54_RS02725	COG2271	Major facilitator Superfamily
IHJ54_RS02730	COG1904	glucuronate isomerase
IHJ54_RS02735	COG0246	Mannitol dehydrogenase
IHJ54_RS02740	COG2721	sulfolactate sulfo-lyase activity
IHJ54_RS02750	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
IHJ54_RS02755	COG0861	Integral membrane protein TerC family
IHJ54_RS02760	COG0673	inositol 2-dehydrogenase activity
IHJ54_RS02765	COG2813	Specifically methylates the guanine in position
IHJ54_RS02770	COG0446	pyridine nucleotide-disulphide oxidoreductase
IHJ54_RS02770	COG1902	pentaerythritol trinitrate reductase activity
IHJ54_RS02780	COG3678	ATP-independent chaperone mediated protein folding
IHJ54_RS02785	COG2199	diguanylate cyclase activity
IHJ54_RS02790	COG3706	GGDEF domain
IHJ54_RS02815	COG0583	DNA-binding transcription factor activity
IHJ54_RS02820	COG2755	lipolytic protein G-D-S-L family
IHJ54_RS02820	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
IHJ54_RS02830	COG3663	DNA glycosylase
IHJ54_RS02840	COG0358	DNA primase activity
IHJ54_RS02845	COG0828	Belongs to the bacterial ribosomal protein bS21 family
IHJ54_RS02850	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
IHJ54_RS02855	COG1438	arginine binding
IHJ54_RS02860	COG0039	L-malate dehydrogenase activity
IHJ54_RS02865	COG3423	Transcriptional regulator
IHJ54_RS02880	COG0142	geranyltranstransferase activity
IHJ54_RS02885	COG0261	This protein binds to 23S rRNA in the presence of protein L20
IHJ54_RS02890	COG0211	Belongs to the bacterial ribosomal protein bL27 family
IHJ54_RS02895	COG0697	spore germination
IHJ54_RS02900	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
IHJ54_RS02905	COG2027	D-alanyl-D-alanine carboxypeptidase
IHJ54_RS02915	COG1534	Rna-binding protein
IHJ54_RS02920	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
IHJ54_RS02925	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IHJ54_RS02930	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
IHJ54_RS02935	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IHJ54_RS02940	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
IHJ54_RS02950	COG2130	NADP-dependent
IHJ54_RS02980	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IHJ54_RS02990	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IHJ54_RS03010	COG2197	response regulator
IHJ54_RS03020	COG0779	Required for maturation of 30S ribosomal subunits
IHJ54_RS03030	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
IHJ54_RS03035	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
IHJ54_RS03040	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
IHJ54_RS03045	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
IHJ54_RS03050	COG1185	polyribonucleotide nucleotidyltransferase activity
IHJ54_RS03065	COG0513	Belongs to the DEAD box helicase family
IHJ54_RS03070	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IHJ54_RS03075	COG0826	peptidase U32
IHJ54_RS03080	COG0826	peptidase U32
IHJ54_RS03085	COG3154	lipid carrier protein
IHJ54_RS03090	COG3153	acetyltransferase
IHJ54_RS03095	COG2827	Endonuclease containing a URI domain
IHJ54_RS03100	COG1473	amidohydrolase
IHJ54_RS03105	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
IHJ54_RS03110	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
IHJ54_RS03115	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
IHJ54_RS03120	COG0813	purine-nucleoside phosphorylase activity
IHJ54_RS03125	COG4178	(ABC) transporter
IHJ54_RS03135	COG3712	iron ion homeostasis
IHJ54_RS03140	COG1595	DNA-templated transcription, initiation
IHJ54_RS03145	COG0583	DNA-binding transcription factor activity
IHJ54_RS03165	COG0456	acetyltransferase
IHJ54_RS03170	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
IHJ54_RS03175	COG2813	Specifically methylates the guanine in position
IHJ54_RS03180	COG0656	L-ascorbic acid biosynthetic process
IHJ54_RS03230	COG1454	alcohol dehydrogenase
IHJ54_RS03235	COG0404	The glycine cleavage system catalyzes the degradation of glycine
IHJ54_RS03240	COG0509	glycine decarboxylation via glycine cleavage system
IHJ54_RS03245	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
IHJ54_RS03245	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
IHJ54_RS03260	COG1175	transmembrane transport
IHJ54_RS03270	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
IHJ54_RS03275	COG3842	ATPase activity
IHJ54_RS03280	COG1653	transport
IHJ54_RS03285	COG2211	Major facilitator Superfamily
IHJ54_RS03305	COG1272	protein, Hemolysin III
IHJ54_RS03310	COG0354	folic acid binding
IHJ54_RS03315	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
IHJ54_RS03325	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
IHJ54_RS03335	COG0716	FMN binding
IHJ54_RS03345	COG0477	Major facilitator Superfamily
IHJ54_RS03350	COG4974	Belongs to the 'phage' integrase family
IHJ54_RS03355	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IHJ54_RS03360	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
IHJ54_RS03370	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
IHJ54_RS03400	COG3646	Phage regulatory protein
IHJ54_RS03425	COG4319	ketosteroid isomerase
IHJ54_RS03435	COG1560	Kdo2-lipid A biosynthetic process
IHJ54_RS03440	COG1953	Uracil, thiamine, allantoin
IHJ54_RS03460	COG2252	PERMEase
IHJ54_RS03465	COG0025	NhaP-type Na H and K H
IHJ54_RS03475	COG5002	protein histidine kinase activity
IHJ54_RS03475	COG3850	Histidine kinase
IHJ54_RS03495	COG4964	Belongs to the GSP D family
IHJ54_RS03575	COG5464	transposase or invertase
IHJ54_RS03580	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
IHJ54_RS03585	COG3162	membrane
IHJ54_RS03590	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
IHJ54_RS03600	COG4774	siderophore transport
IHJ54_RS03610	COG3712	iron ion homeostasis
IHJ54_RS03630	COG0246	Mannitol dehydrogenase
IHJ54_RS03635	COG2873	o-acetylhomoserine
IHJ54_RS03640	COG1376	ErfK ybiS ycfS ynhG family protein
IHJ54_RS03645	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
IHJ54_RS03650	COG3038	cytochrome b561
IHJ54_RS03655	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IHJ54_RS03655	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
IHJ54_RS03655	COG1013	pyruvate-flavodoxin oxidoreductase activity
IHJ54_RS03655	COG0674	pyruvate-flavodoxin oxidoreductase activity
IHJ54_RS03675	COG1280	lysine exporter protein (LysE YggA)
IHJ54_RS03710	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
IHJ54_RS03715	COG2867	negative regulation of translational initiation
IHJ54_RS03720	COG2914	Belongs to the UPF0125 (RnfH) family
IHJ54_RS03730	COG0497	DNA recombination
IHJ54_RS03735	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
IHJ54_RS03740	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
IHJ54_RS03745	COG1914	H( )-stimulated, divalent metal cation uptake system
IHJ54_RS03750	COG1942	4-Oxalocrotonate Tautomerase
IHJ54_RS03755	COG0477	Major facilitator Superfamily
IHJ54_RS03765	COG0494	nUDIX hydrolase
IHJ54_RS03795	COG1609	Transcriptional regulator
IHJ54_RS03800	COG3711	transcriptional antiterminator
IHJ54_RS03805	COG2723	6-phospho-beta-galactosidase activity
IHJ54_RS03810	COG2190	(PTS) system
IHJ54_RS03810	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IHJ54_RS03810	COG1263	PTS System
IHJ54_RS03815	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IHJ54_RS03820	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IHJ54_RS03825	COG0698	ribose 5-phosphate isomerase
IHJ54_RS03835	COG2376	Dihydroxyacetone kinase
IHJ54_RS03840	COG0149	triose-phosphate isomerase activity
IHJ54_RS03845	COG1082	Xylose isomerase domain protein TIM barrel
IHJ54_RS03850	COG2084	Dehydrogenase
IHJ54_RS03865	COG0814	amino acid
IHJ54_RS03870	COG1671	Belongs to the UPF0178 family
IHJ54_RS03875	COG0408	coproporphyrinogen oxidase activity
IHJ54_RS03880	COG0456	acetyltransferase
IHJ54_RS03890	COG4771	TonB-dependent receptor
IHJ54_RS03895	COG0612	Peptidase, M16
IHJ54_RS03900	COG4178	(ABC) transporter
IHJ54_RS03910	COG2837	iron assimilation
IHJ54_RS03915	COG4150	thiosulfate binding
IHJ54_RS03920	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
IHJ54_RS03925	COG4208	sulfate ABC transporter
IHJ54_RS03930	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
IHJ54_RS03935	COG0577	efflux transmembrane transporter activity
IHJ54_RS03935	COG1136	(ABC) transporter
IHJ54_RS03940	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IHJ54_RS03945	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS03950	COG2205	protein histidine kinase activity
IHJ54_RS03955	COG2190	(PTS) system
IHJ54_RS03965	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IHJ54_RS03975	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
IHJ54_RS03980	COG3115	cell septum assembly
IHJ54_RS03985	COG0531	amino acid
IHJ54_RS03995	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
IHJ54_RS04005	COG0446	pyridine nucleotide-disulphide oxidoreductase
IHJ54_RS04010	COG0426	domain, Protein
IHJ54_RS04010	COG1773	rubredoxin
IHJ54_RS04015	COG3604	Transcriptional regulator
IHJ54_RS04020	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
IHJ54_RS04020	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
IHJ54_RS04045	COG2169	Transcriptional regulator
IHJ54_RS04045	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IHJ54_RS04060	COG1053	succinate dehydrogenase
IHJ54_RS04060	COG3976	FMN-binding domain protein
IHJ54_RS04060	COG0431	NADPH-dependent FMN reductase
IHJ54_RS04065	COG0477	Major facilitator Superfamily
IHJ54_RS04070	COG3301	Polysulphide reductase, NrfD
IHJ54_RS04075	COG0437	4 iron, 4 sulfur cluster binding
IHJ54_RS04085	COG0583	DNA-binding transcription factor activity
IHJ54_RS04100	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS04105	COG1063	alcohol dehydrogenase
IHJ54_RS04110	COG0477	Major facilitator Superfamily
IHJ54_RS04115	COG0246	Mannitol dehydrogenase
IHJ54_RS04120	COG1802	Transcriptional regulator
IHJ54_RS04135	COG0811	peptide transport
IHJ54_RS04155	COG2814	Major facilitator Superfamily
IHJ54_RS04180	COG0583	DNA-binding transcription factor activity
IHJ54_RS04190	COG4773	Receptor
IHJ54_RS04195	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS04205	COG1129	ABC transporter
IHJ54_RS04225	COG3121	Chaperone
IHJ54_RS04290	COG2249	NAD(P)H dehydrogenase (quinone) activity
IHJ54_RS04305	COG1846	Transcriptional regulator
IHJ54_RS04310	COG2814	Major facilitator Superfamily
IHJ54_RS04315	COG2207	Transcriptional regulator
IHJ54_RS04365	COG0297	glycogen (starch) synthase activity
IHJ54_RS04370	COG0438	transferase activity, transferring glycosyl groups
IHJ54_RS04385	COG1045	serine acetyltransferase
IHJ54_RS04440	COG3423	Transcriptional regulator
IHJ54_RS04450	COG1982	Orn Lys Arg decarboxylase major
IHJ54_RS04470	COG5441	Belongs to the UPF0261 family
IHJ54_RS04475	COG5564	TIM-barrel signal transduction protein
IHJ54_RS04480	COG0741	lytic transglycosylase activity
IHJ54_RS04485	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
IHJ54_RS04495	COG0220	tRNA (guanine-N7-)-methyltransferase activity
IHJ54_RS04500	COG3171	Protein conserved in bacteria
IHJ54_RS04510	COG1404	Belongs to the peptidase S8 family
IHJ54_RS04515	COG2188	Transcriptional regulator
IHJ54_RS04520	COG3624	Phosphonate C-P lyase system protein PhnG
IHJ54_RS04525	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
IHJ54_RS04530	COG3626	phosphonate metabolism
IHJ54_RS04535	COG3627	carbon phosphorus lyase activity
IHJ54_RS04540	COG4107	phosphonate C-P lyase system protein PhnK
IHJ54_RS04545	COG4778	phosphonate C-P lyase system protein PhnL
IHJ54_RS04550	COG3454	Phosphonate metabolism
IHJ54_RS04560	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
IHJ54_RS04570	COG3639	organic phosphonate transmembrane transporter activity
IHJ54_RS04575	COG0667	Aldo Keto reductase
IHJ54_RS04585	COG0861	Integral membrane protein TerC family
IHJ54_RS04590	COG3066	DNA modification
IHJ54_RS04595	COG0494	nUDIX hydrolase
IHJ54_RS04605	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
IHJ54_RS04610	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
IHJ54_RS04620	COG4795	General secretion pathway protein
IHJ54_RS04635	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
IHJ54_RS04640	COG1025	Belongs to the peptidase M16 family
IHJ54_RS04645	COG1074	ATP-dependent DNA helicase activity
IHJ54_RS04650	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
IHJ54_RS04655	COG1609	Transcriptional regulator
IHJ54_RS04665	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
IHJ54_RS04665	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
IHJ54_RS04670	COG0860	N-Acetylmuramoyl-L-alanine amidase
IHJ54_RS04690	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
IHJ54_RS04695	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IHJ54_RS04705	COG1473	amidohydrolase
IHJ54_RS04710	COG4172	Belongs to the ABC transporter superfamily
IHJ54_RS04715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS04725	COG0747	negative chemotaxis
IHJ54_RS04735	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
IHJ54_RS04740	COG2166	iron-sulfur cluster assembly
IHJ54_RS04745	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IHJ54_RS04755	COG0583	DNA-binding transcription factor activity
IHJ54_RS04760	COG2363	Small membrane protein
IHJ54_RS04765	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
IHJ54_RS04770	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IHJ54_RS04775	COG1611	Belongs to the LOG family
IHJ54_RS04780	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
IHJ54_RS04780	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
IHJ54_RS04825	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
IHJ54_RS04835	COG0052	Belongs to the universal ribosomal protein uS2 family
IHJ54_RS04840	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
IHJ54_RS04845	COG0528	UMP kinase activity
IHJ54_RS04850	COG0233	cytoplasmic translational termination
IHJ54_RS04855	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
IHJ54_RS04860	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
IHJ54_RS04865	COG0575	Belongs to the CDS family
IHJ54_RS04870	COG0750	zinc metalloprotease
IHJ54_RS04875	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IHJ54_RS04880	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
IHJ54_RS04885	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IHJ54_RS04890	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
IHJ54_RS04895	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IHJ54_RS04900	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IHJ54_RS04905	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IHJ54_RS04910	COG0587	DNA-directed DNA polymerase activity
IHJ54_RS04915	COG0825	malonyl-CoA metabolic process
IHJ54_RS04920	COG0346	lactoylglutathione lyase activity
IHJ54_RS04925	COG0037	tRNA processing
IHJ54_RS04930	COG4568	rho-dependent transcription termination
IHJ54_RS04940	COG4681	YaeQ
IHJ54_RS04945	COG3015	lipoprotein NlpE involved in copper resistance
IHJ54_RS04950	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
IHJ54_RS04975	COG1120	ATPase activity
IHJ54_RS04980	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IHJ54_RS04985	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IHJ54_RS04990	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
IHJ54_RS04995	COG4772	TonB-dependent receptor
IHJ54_RS05000	COG3712	iron ion homeostasis
IHJ54_RS05005	COG1595	DNA-templated transcription, initiation
IHJ54_RS05010	COG4943	cyclic-guanylate-specific phosphodiesterase activity
IHJ54_RS05015	COG2824	Alkylphosphonate utilization operon protein PhnA
IHJ54_RS05020	COG2951	lytic endotransglycosylase activity
IHJ54_RS05035	COG0583	DNA-binding transcription factor activity
IHJ54_RS05065	COG2186	Transcriptional regulator
IHJ54_RS05070	COG1312	Catalyzes the dehydration of D-mannonate
IHJ54_RS05075	COG5297	Belongs to the glycosyl hydrolase family 6
IHJ54_RS05110	COG4615	Cyclic peptide transporter
IHJ54_RS05120	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
IHJ54_RS05125	COG3123	guanosine phosphorylase activity
IHJ54_RS05130	COG2211	Major facilitator Superfamily
IHJ54_RS05135	COG1397	ADP-ribosylglycohydrolase
IHJ54_RS05140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IHJ54_RS05145	COG2188	Transcriptional regulator
IHJ54_RS05155	COG2974	May be involved in recombination
IHJ54_RS05160	COG1940	carbohydrate kinase activity
IHJ54_RS05165	COG0419	ATPase involved in DNA repair
IHJ54_RS05170	COG0420	3'-5' exonuclease activity
IHJ54_RS05190	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
IHJ54_RS05195	COG1114	Component of the transport system for branched-chain amino acids
IHJ54_RS05205	COG0668	transmembrane transport
IHJ54_RS05210	COG0450	alkyl hydroperoxide reductase
IHJ54_RS05215	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
IHJ54_RS05220	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
IHJ54_RS05225	COG0343	queuine tRNA-ribosyltransferase activity
IHJ54_RS05230	COG1862	Preprotein translocase
IHJ54_RS05235	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IHJ54_RS05240	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
IHJ54_RS05245	COG4238	major outer membrane lipoprotein
IHJ54_RS05250	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
IHJ54_RS05255	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IHJ54_RS05255	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IHJ54_RS05260	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
IHJ54_RS05265	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IHJ54_RS05270	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
IHJ54_RS05275	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
IHJ54_RS05280	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
IHJ54_RS05285	COG0142	geranyltranstransferase activity
IHJ54_RS05290	COG1722	exodeoxyribonuclease VII activity
IHJ54_RS05295	COG0301	tRNA thio-modification
IHJ54_RS05295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IHJ54_RS05305	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
IHJ54_RS05310	COG1666	GTP binding
IHJ54_RS05315	COG2814	Major facilitator Superfamily
IHJ54_RS05320	COG0109	protoheme IX farnesyltransferase activity
IHJ54_RS05325	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
IHJ54_RS05330	COG1845	cytochrome c oxidase, subunit III
IHJ54_RS05335	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
IHJ54_RS05340	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
IHJ54_RS05345	COG2223	nitrite transmembrane transporter activity
IHJ54_RS05350	COG3056	Lipoprotein
IHJ54_RS05355	COG0271	Belongs to the BolA IbaG family
IHJ54_RS05360	COG0544	peptidyl-prolyl cis-trans isomerase activity
IHJ54_RS05365	COG0740	serine-type endopeptidase activity
IHJ54_RS05370	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
IHJ54_RS05375	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
IHJ54_RS05380	COG0776	regulation of translation
IHJ54_RS05385	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IHJ54_RS05390	COG1555	photosystem II stabilization
IHJ54_RS05395	COG0824	Thioesterase
IHJ54_RS05400	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
IHJ54_RS05410	COG1522	sequence-specific DNA binding
IHJ54_RS05415	COG1132	(ABC) transporter
IHJ54_RS05420	COG1132	(ABC) transporter
IHJ54_RS05425	COG0347	Belongs to the P(II) protein family
IHJ54_RS05430	COG0004	ammonium transporteR
IHJ54_RS05435	COG1946	Acyl-CoA thioesterase
IHJ54_RS05440	COG3126	Type III secretion system lipoprotein chaperone (YscW)
IHJ54_RS05445	COG3695	enzyme binding
IHJ54_RS05465	COG0257	Belongs to the bacterial ribosomal protein bL36 family
IHJ54_RS05470	COG0254	rRNA binding
IHJ54_RS05475	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IHJ54_RS05480	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IHJ54_RS05485	COG1309	transcriptional regulator
IHJ54_RS05500	COG2832	Protein of unknown function (DUF454)
IHJ54_RS05505	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IHJ54_RS05515	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
IHJ54_RS05520	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
IHJ54_RS05525	COG0326	Molecular chaperone. Has ATPase activity
IHJ54_RS05530	COG0563	adenylate kinase activity
IHJ54_RS05535	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
IHJ54_RS05540	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
IHJ54_RS05540	COG4651	solute:proton antiporter activity
IHJ54_RS05545	COG0737	Belongs to the 5'-nucleotidase family
IHJ54_RS05570	COG1966	Carbon starvation protein
IHJ54_RS05575	COG2879	small protein
IHJ54_RS05580	COG0523	cobalamin synthesis protein
IHJ54_RS05585	COG5434	Belongs to the glycosyl hydrolase 28 family
IHJ54_RS05595	COG3735	TraB family
IHJ54_RS05610	COG2217	Heavy metal translocating P-type atpase
IHJ54_RS05620	COG1585	Membrane protein implicated in regulation of membrane protease activity
IHJ54_RS05625	COG0330	HflC and HflK could
IHJ54_RS05630	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IHJ54_RS05635	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IHJ54_RS05640	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IHJ54_RS05645	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
IHJ54_RS05655	COG0784	Response regulator, receiver
IHJ54_RS05655	COG2205	protein histidine kinase activity
IHJ54_RS05660	COG2197	response regulator
IHJ54_RS05665	COG0642	Histidine kinase
IHJ54_RS05665	COG2198	Histidine kinase
IHJ54_RS05670	COG2223	nitrite transmembrane transporter activity
IHJ54_RS05675	COG1169	isochorismate synthase
IHJ54_RS05680	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
IHJ54_RS05685	COG0596	Alpha beta hydrolase
IHJ54_RS05690	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
IHJ54_RS05695	COG1441	menaquinone biosynthetic process
IHJ54_RS05715	COG0814	amino acid
IHJ54_RS05725	COG3547	Transposase (IS116 IS110 IS902 family)
IHJ54_RS05730	COG3118	belongs to the thioredoxin family
IHJ54_RS05735	COG0300	oxidoreductase activity
IHJ54_RS05740	COG2755	lipolytic protein G-D-S-L family
IHJ54_RS05745	COG4181	ATPase activity
IHJ54_RS05750	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
IHJ54_RS05760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IHJ54_RS05770	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IHJ54_RS05775	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IHJ54_RS05780	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
IHJ54_RS05785	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
IHJ54_RS05790	COG2233	PERMEase
IHJ54_RS05795	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
IHJ54_RS05800	COG1393	Belongs to the ArsC family
IHJ54_RS05805	COG4783	chaperone-mediated protein folding
IHJ54_RS05810	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
IHJ54_RS05815	COG2716	regulation of RNA biosynthetic process
IHJ54_RS05825	COG0662	Cupin 2, conserved barrel domain protein
IHJ54_RS05835	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
IHJ54_RS05840	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
IHJ54_RS05845	COG2707	UPF0756 membrane protein
IHJ54_RS05850	COG1444	tRNA N-acetyltransferase activity
IHJ54_RS05855	COG3813	Protein conserved in bacteria
IHJ54_RS05860	COG0400	carboxylic ester hydrolase activity
IHJ54_RS05875	COG1876	peptidase activity
IHJ54_RS05880	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IHJ54_RS05885	COG1393	Belongs to the ArsC family
IHJ54_RS05895	COG1794	racemase activity, acting on amino acids and derivatives
IHJ54_RS05905	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IHJ54_RS05910	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
IHJ54_RS05915	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
IHJ54_RS05920	COG0321	lipoyl(octanoyl) transferase activity
IHJ54_RS05925	COG2921	Belongs to the UPF0250 family
IHJ54_RS05930	COG1686	Belongs to the peptidase S11 family
IHJ54_RS05935	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
IHJ54_RS05940	COG0772	Belongs to the SEDS family
IHJ54_RS05945	COG0768	penicillin binding
IHJ54_RS05950	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
IHJ54_RS05955	COG0799	negative regulation of ribosome biogenesis
IHJ54_RS05960	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
IHJ54_RS05965	COG1466	dna polymerase III delta subunit
IHJ54_RS05970	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
IHJ54_RS05975	COG0495	leucyl-tRNA aminoacylation
IHJ54_RS05980	COG2888	peptidyl-tyrosine sulfation
IHJ54_RS05985	COG1126	abc transporter atp-binding protein
IHJ54_RS05990	COG0765	amino acid transport
IHJ54_RS05995	COG0765	amino acid transport
IHJ54_RS06005	COG0815	Transfers the fatty acyl group on membrane lipoproteins
IHJ54_RS06015	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
IHJ54_RS06020	COG1702	phosphate starvation-inducible protein PhoH
IHJ54_RS06025	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
IHJ54_RS06030	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IHJ54_RS06075	COG0367	asparagine synthase
IHJ54_RS06080	COG1846	Transcriptional regulator
IHJ54_RS06080	COG1940	carbohydrate kinase activity
IHJ54_RS06085	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
IHJ54_RS06090	COG0363	glucosamine-6-phosphate deaminase activity
IHJ54_RS06095	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IHJ54_RS06095	COG2190	(PTS) system
IHJ54_RS06095	COG1263	PTS System
IHJ54_RS06100	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IHJ54_RS06105	COG0735	belongs to the Fur family
IHJ54_RS06110	COG0716	FMN binding
IHJ54_RS06115	COG0840	transmembrane signaling receptor activity
IHJ54_RS06125	COG0596	Alpha beta hydrolase
IHJ54_RS06130	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
IHJ54_RS06135	COG0033	Phosphoglucomutase
IHJ54_RS06145	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS06150	COG2205	protein histidine kinase activity
IHJ54_RS06155	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
IHJ54_RS06160	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
IHJ54_RS06165	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
IHJ54_RS06185	COG1840	ABC-type Fe3 transport system, periplasmic component
IHJ54_RS06190	COG3842	ATPase activity
IHJ54_RS06195	COG3272	Protein of unknown function (DUF1722)
IHJ54_RS06200	COG0415	Belongs to the DNA photolyase family
IHJ54_RS06205	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
IHJ54_RS06210	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
IHJ54_RS06215	COG1984	allophanate hydrolase subunit 2
IHJ54_RS06220	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
IHJ54_RS06225	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
IHJ54_RS06230	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
IHJ54_RS06250	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
IHJ54_RS06255	COG1053	succinate dehydrogenase
IHJ54_RS06260	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
IHJ54_RS06265	COG0567	Dehydrogenase, E1 component
IHJ54_RS06270	COG0508	dehydrogenase complex catalyzes the overall conversion of
IHJ54_RS06275	COG0045	succinate-CoA ligase (ADP-forming) activity
IHJ54_RS06280	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
IHJ54_RS06290	COG1271	oxidase subunit
IHJ54_RS06295	COG1294	oxidase, subunit
IHJ54_RS06300	COG4890	Cyd operon protein YbgT
IHJ54_RS06305	COG3790	cyd operon protein YbgE
IHJ54_RS06310	COG0824	Thioesterase
IHJ54_RS06315	COG0811	peptide transport
IHJ54_RS06320	COG0848	biopolymer transport protein
IHJ54_RS06325	COG3064	Membrane
IHJ54_RS06330	COG0823	Involved in the tonB-independent uptake of proteins
IHJ54_RS06335	COG2885	chlorophyll binding
IHJ54_RS06340	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
IHJ54_RS06355	COG1811	Na channel or pump
IHJ54_RS06365	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
IHJ54_RS06375	COG1230	cation diffusion facilitator family transporter
IHJ54_RS06380	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IHJ54_RS06385	COG0588	phosphoglycerate mutase activity
IHJ54_RS06390	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IHJ54_RS06395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IHJ54_RS06415	COG2017	converts alpha-aldose to the beta-anomer
IHJ54_RS06420	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
IHJ54_RS06425	COG1119	ATPase activity
IHJ54_RS06430	COG2005	Transcriptional regulator
IHJ54_RS06430	COG3585	molybdate ion transport
IHJ54_RS06440	COG0725	ABC transporter, periplasmic molybdate-binding protein
IHJ54_RS06445	COG4149	molybdate abc transporter
IHJ54_RS06450	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
IHJ54_RS06475	COG2211	Major facilitator Superfamily
IHJ54_RS06480	COG0837	glucose binding
IHJ54_RS06485	COG0561	phosphatase activity
IHJ54_RS06495	COG2706	6-phosphogluconolactonase activity
IHJ54_RS06510	COG2864	formate dehydrogenase
IHJ54_RS06515	COG0437	4 iron, 4 sulfur cluster binding
IHJ54_RS06520	COG3383	formate dehydrogenase (NAD+) activity
IHJ54_RS06520	COG0243	molybdopterin cofactor binding
IHJ54_RS06525	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IHJ54_RS06525	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IHJ54_RS06530	COG0489	protein tyrosine kinase activity
IHJ54_RS06535	COG0572	uridine kinase
IHJ54_RS06540	COG0717	Belongs to the dCTP deaminase family
IHJ54_RS06545	COG2982	Protein involved in outer membrane biogenesis
IHJ54_RS06550	COG3069	C4-dicarboxylate transmembrane transporter activity
IHJ54_RS06565	COG1253	flavin adenine dinucleotide binding
IHJ54_RS06570	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IHJ54_RS06590	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
IHJ54_RS06600	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
IHJ54_RS06610	COG2244	polysaccharide biosynthetic process
IHJ54_RS06615	COG0463	Glycosyl transferase, family 2
IHJ54_RS06615	COG1216	Glycosyl transferase, family 2
IHJ54_RS06625	COG0110	maltose O-acetyltransferase activity
IHJ54_RS06645	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
IHJ54_RS06650	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IHJ54_RS06655	COG1051	belongs to the nudix hydrolase family
IHJ54_RS06665	COG1215	transferase activity, transferring glycosyl groups
IHJ54_RS06675	COG1210	Utp--glucose-1-phosphate uridylyltransferase
IHJ54_RS06700	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IHJ54_RS06705	COG1605	Chorismate mutase
IHJ54_RS06715	COG2723	6-phospho-beta-galactosidase activity
IHJ54_RS06720	COG3711	transcriptional antiterminator
IHJ54_RS06725	COG3706	GGDEF domain
IHJ54_RS06750	COG3962	Belongs to the TPP enzyme family
IHJ54_RS06765	COG0673	inositol 2-dehydrogenase activity
IHJ54_RS06780	COG1172	Belongs to the binding-protein-dependent transport system permease family
IHJ54_RS06785	COG0673	inositol 2-dehydrogenase activity
IHJ54_RS06790	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IHJ54_RS06800	COG3718	enzyme involved in inositol metabolism
IHJ54_RS06815	COG3842	ATPase activity
IHJ54_RS06820	COG4208	sulfate ABC transporter
IHJ54_RS06825	COG1840	ABC-type Fe3 transport system, periplasmic component
IHJ54_RS06835	COG2723	6-phospho-beta-galactosidase activity
IHJ54_RS06840	COG1263	PTS System
IHJ54_RS06840	COG2190	(PTS) system
IHJ54_RS06840	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IHJ54_RS06845	COG2199	diguanylate cyclase activity
IHJ54_RS06845	COG2203	Gaf domain
IHJ54_RS06855	COG3615	Tellurite resistance protein tehB
IHJ54_RS06870	COG0583	DNA-binding transcription factor activity
IHJ54_RS06875	COG0583	DNA-binding transcription factor activity
IHJ54_RS06880	COG2910	NAD(P)H-binding
IHJ54_RS06895	COG2223	nitrite transmembrane transporter activity
IHJ54_RS06900	COG3250	beta-galactosidase activity
IHJ54_RS06905	COG1609	Transcriptional regulator
IHJ54_RS06910	COG3842	ATPase activity
IHJ54_RS06920	COG1840	ABC-type Fe3 transport system, periplasmic component
IHJ54_RS06925	COG2271	Major facilitator Superfamily
IHJ54_RS06940	COG1464	Belongs to the NlpA lipoprotein family
IHJ54_RS06955	COG0583	DNA-binding transcription factor activity
IHJ54_RS06960	COG1301	dicarboxylic acid transport
IHJ54_RS06970	COG2851	Citrate transporter
IHJ54_RS06975	COG3383	formate dehydrogenase (NAD+) activity
IHJ54_RS06985	COG0672	)-iron permease
IHJ54_RS07000	COG1136	(ABC) transporter
IHJ54_RS07000	COG0577	efflux transmembrane transporter activity
IHJ54_RS07010	COG1136	(ABC) transporter
IHJ54_RS07010	COG0577	efflux transmembrane transporter activity
IHJ54_RS07015	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IHJ54_RS07020	COG0697	spore germination
IHJ54_RS07035	COG1301	dicarboxylic acid transport
IHJ54_RS07040	COG0371	Dehydrogenase
IHJ54_RS07045	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
IHJ54_RS07090	COG1012	belongs to the aldehyde dehydrogenase family
IHJ54_RS07095	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
IHJ54_RS07115	COG0477	Major facilitator Superfamily
IHJ54_RS07125	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IHJ54_RS07130	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS07135	COG0747	negative chemotaxis
IHJ54_RS07150	COG0444	Belongs to the ABC transporter superfamily
IHJ54_RS07175	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IHJ54_RS07195	COG4771	TonB-dependent receptor
IHJ54_RS07215	COG1132	(ABC) transporter
IHJ54_RS07215	COG2375	cellular response to nickel ion
IHJ54_RS07220	COG1132	(ABC) transporter
IHJ54_RS07240	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IHJ54_RS07240	COG3008	intermembrane lipid transfer
IHJ54_RS07245	COG2995	paraquat-inducible protein a
IHJ54_RS07260	COG0784	Response regulator, receiver
IHJ54_RS07260	COG0835	chemotaxis
IHJ54_RS07270	COG3226	Transcriptional regulator
IHJ54_RS07275	COG2814	Major facilitator Superfamily
IHJ54_RS07280	COG0625	glutathione transferase activity
IHJ54_RS07285	COG2910	NAD(P)H-binding
IHJ54_RS07290	COG1733	regulation of RNA biosynthetic process
IHJ54_RS07300	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
IHJ54_RS07305	COG0640	Transcriptional regulator
IHJ54_RS07310	COG2814	Major facilitator Superfamily
IHJ54_RS07315	COG4978	Transcriptional regulator
IHJ54_RS07315	COG0789	Transcriptional regulator
IHJ54_RS07320	COG2723	6-phospho-beta-galactosidase activity
IHJ54_RS07330	COG3122	Protein conserved in bacteria
IHJ54_RS07360	COG0789	Transcriptional regulator
IHJ54_RS07370	COG0300	oxidoreductase activity
IHJ54_RS07385	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
IHJ54_RS07405	COG3272	Protein of unknown function (DUF1722)
IHJ54_RS07435	COG3228	Belongs to the MtfA family
IHJ54_RS07450	COG0401	homolog of Blt101
IHJ54_RS07470	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
IHJ54_RS07475	COG0303	'Molybdopterin
IHJ54_RS07480	COG4172	Belongs to the ABC transporter superfamily
IHJ54_RS07485	COG0747	negative chemotaxis
IHJ54_RS07490	COG0601	transmembrane transport
IHJ54_RS07495	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS07500	COG0281	malic enzyme
IHJ54_RS07505	COG0295	cytidine deaminase activity
IHJ54_RS07510	COG1346	cytolysis
IHJ54_RS07515	COG1380	Effector of murein hydrolase LrgA
IHJ54_RS07520	COG5297	Belongs to the glycosyl hydrolase family 6
IHJ54_RS07530	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
IHJ54_RS07535	COG0156	8-amino-7-oxononanoate synthase activity
IHJ54_RS07540	COG2226	methyltransferase
IHJ54_RS07545	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
IHJ54_RS07550	COG0556	nucleotide-excision repair
IHJ54_RS07565	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
IHJ54_RS07570	COG0521	Mo-molybdopterin cofactor biosynthetic process
IHJ54_RS07575	COG0315	cyclic pyranopterin monophosphate synthase activity
IHJ54_RS07580	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
IHJ54_RS07585	COG0314	molybdopterin synthase activity
IHJ54_RS07590	COG0670	Belongs to the BI1 family
IHJ54_RS07595	COG0842	Transport permease protein
IHJ54_RS07600	COG0842	Transport permease protein
IHJ54_RS07605	COG1131	(ABC) transporter
IHJ54_RS07620	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IHJ54_RS07625	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IHJ54_RS07630	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IHJ54_RS07635	COG1120	ATPase activity
IHJ54_RS07645	COG0513	Belongs to the DEAD box helicase family
IHJ54_RS07655	COG2207	Transcriptional regulator
IHJ54_RS07655	COG3708	Transcriptional regulator
IHJ54_RS07660	COG2195	Cleaves the N-terminal amino acid of tripeptides
IHJ54_RS07665	COG0747	negative chemotaxis
IHJ54_RS07670	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
IHJ54_RS07675	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IHJ54_RS07695	COG0833	amino acid
IHJ54_RS07700	COG2040	homocysteine
IHJ54_RS07725	COG1686	Belongs to the peptidase S11 family
IHJ54_RS07740	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
IHJ54_RS07895	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
IHJ54_RS07905	COG1126	abc transporter atp-binding protein
IHJ54_RS07910	COG0765	amino acid transport
IHJ54_RS07915	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IHJ54_RS07920	COG0783	Belongs to the Dps family
IHJ54_RS07935	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
IHJ54_RS07945	COG2807	transmembrane transport
IHJ54_RS07950	COG0534	Mate efflux family protein
IHJ54_RS07955	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IHJ54_RS07965	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
IHJ54_RS07990	COG1078	dGTPase activity
IHJ54_RS08005	COG3083	sulfuric ester hydrolase activity
IHJ54_RS08010	COG3082	Protein of unknown function (DUF1414)
IHJ54_RS08015	COG3081	Nucleoid-associated protein
IHJ54_RS08025	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
IHJ54_RS08030	COG1061	Type III restriction enzyme res subunit
IHJ54_RS08045	COG2814	Major facilitator Superfamily
IHJ54_RS08055	COG4172	Belongs to the ABC transporter superfamily
IHJ54_RS08060	COG4239	(ABC) transporter, permease
IHJ54_RS08065	COG4174	ABC transporter (Permease)
IHJ54_RS08070	COG4166	transmembrane transport
IHJ54_RS08075	COG0791	NLP P60 protein
IHJ54_RS08080	COG0671	phosphoesterase, PA-phosphatase related
IHJ54_RS08085	COG0523	cobalamin synthesis protein
IHJ54_RS08090	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IHJ54_RS08105	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
IHJ54_RS08105	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
IHJ54_RS08110	COG1105	Belongs to the carbohydrate kinase PfkB family
IHJ54_RS08115	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IHJ54_RS08115	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
IHJ54_RS08115	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
IHJ54_RS08120	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
IHJ54_RS08125	COG2855	membrane
IHJ54_RS08130	COG0583	DNA-binding transcription factor activity
IHJ54_RS08135	COG0833	amino acid
IHJ54_RS08140	COG4771	TonB-dependent receptor
IHJ54_RS08145	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IHJ54_RS08150	COG1172	Belongs to the binding-protein-dependent transport system permease family
IHJ54_RS08155	COG1129	ABC transporter
IHJ54_RS08160	COG0371	Dehydrogenase
IHJ54_RS08185	COG0583	DNA-binding transcription factor activity
IHJ54_RS08190	COG0840	transmembrane signaling receptor activity
IHJ54_RS08195	COG0302	gtp cyclohydrolase
IHJ54_RS08200	COG2311	Membrane
IHJ54_RS08205	COG2949	membrane
IHJ54_RS08210	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
IHJ54_RS08220	COG2133	pyrroloquinoline quinone binding
IHJ54_RS08225	COG0625	glutathione transferase activity
IHJ54_RS08235	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IHJ54_RS08240	COG2011	ABC-type metal ion transport system permease component
IHJ54_RS08245	COG1686	Belongs to the peptidase S11 family
IHJ54_RS08250	COG1349	DNA-binding transcription factor activity
IHJ54_RS08255	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
IHJ54_RS08260	COG0569	domain protein
IHJ54_RS08260	COG2985	domain, Protein
IHJ54_RS08275	COG0778	Nitroreductase
IHJ54_RS08280	COG0189	ligase activity
IHJ54_RS08290	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
IHJ54_RS08295	COG3842	ATPase activity
IHJ54_RS08300	COG1176	ABC-type spermidine putrescine transport system, permease component I
IHJ54_RS08305	COG1177	transmembrane transport
IHJ54_RS08315	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IHJ54_RS08325	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IHJ54_RS08330	COG4160	amino acid transport
IHJ54_RS08335	COG4215	(ABC) transporter
IHJ54_RS08340	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IHJ54_RS08345	COG1126	abc transporter atp-binding protein
IHJ54_RS08350	COG0393	Putative heavy-metal-binding
IHJ54_RS08355	COG3023	N-Acetylmuramoyl-L-alanine amidase
IHJ54_RS08360	COG0702	epimerase
IHJ54_RS08365	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IHJ54_RS08370	COG1151	hydroxylamine reductase activity
IHJ54_RS08375	COG2431	L-lysine efflux transmembrane transporter activity
IHJ54_RS08380	COG3593	DNA synthesis involved in DNA repair
IHJ54_RS08385	COG1278	Cold shock
IHJ54_RS08390	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
IHJ54_RS08395	COG0542	response to heat
IHJ54_RS08400	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IHJ54_RS08410	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
IHJ54_RS08415	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
IHJ54_RS08420	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
IHJ54_RS08425	COG4988	ABC transporter
IHJ54_RS08430	COG0492	ferredoxin-NADP+ reductase activity
IHJ54_RS08440	COG1674	ftsk spoiiie
IHJ54_RS08440	COG3107	peptidoglycan biosynthetic process
IHJ54_RS08445	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
IHJ54_RS08450	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
IHJ54_RS08455	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
IHJ54_RS08460	COG2814	Major facilitator Superfamily
IHJ54_RS08485	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IHJ54_RS08490	COG1882	Formate acetyltransferase
IHJ54_RS08495	COG2116	formate transmembrane transporter activity
IHJ54_RS08500	COG1944	ATP diphosphatase activity
IHJ54_RS08505	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
IHJ54_RS08510	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
IHJ54_RS08515	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
IHJ54_RS08520	COG0539	negative regulation of cytoplasmic translation
IHJ54_RS08525	COG0776	regulation of translation
IHJ54_RS08530	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
IHJ54_RS08530	COG0140	phosphoribosyl-ATP diphosphatase activity
IHJ54_RS08535	COG0107	imidazoleglycerol-phosphate synthase activity
IHJ54_RS08540	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
IHJ54_RS08545	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
IHJ54_RS08550	COG0131	Imidazoleglycerol-phosphate dehydratase
IHJ54_RS08550	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
IHJ54_RS08555	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
IHJ54_RS08560	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
IHJ54_RS08565	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
IHJ54_RS08575	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IHJ54_RS08580	COG0840	transmembrane signaling receptor activity
IHJ54_RS08585	COG0840	transmembrane signaling receptor activity
IHJ54_RS08590	COG4565	transcriptional regulatory protein
IHJ54_RS08600	COG3493	citrate carrier protein
IHJ54_RS08605	COG0179	Fumarylacetoacetate (FAA) hydrolase
IHJ54_RS08610	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
IHJ54_RS08615	COG3052	prosthetic group binding
IHJ54_RS08635	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
IHJ54_RS08640	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
IHJ54_RS08645	COG0531	amino acid
IHJ54_RS08650	COG2925	Exonuclease
IHJ54_RS08655	COG4607	ABC-type enterochelin transport system periplasmic component
IHJ54_RS08665	COG4605	iron ion homeostasis
IHJ54_RS08670	COG4604	ABC transporter, ATP-binding protein
IHJ54_RS08675	COG2926	Belongs to the UPF0265 family
IHJ54_RS08680	COG0658	competence protein
IHJ54_RS08680	COG2333	competence protein COMEC
IHJ54_RS08685	COG1132	(ABC) transporter
IHJ54_RS08690	COG1663	tetraacyldisaccharide 4'-kinase activity
IHJ54_RS08695	COG2835	tetraacyldisaccharide 4'-kinase activity
IHJ54_RS08700	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
IHJ54_RS08710	COG3173	Aminoglycoside phosphotransferase
IHJ54_RS08715	COG1434	Gram-negative-bacterium-type cell wall biogenesis
IHJ54_RS08720	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
IHJ54_RS08725	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
IHJ54_RS08730	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
IHJ54_RS08735	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
IHJ54_RS08740	COG2989	Protein conserved in bacteria
IHJ54_RS08745	COG3108	Peptidase M15
IHJ54_RS08750	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IHJ54_RS08755	COG1448	Aminotransferase
IHJ54_RS08765	COG0017	Asparaginyl-tRNA synthetase
IHJ54_RS08770	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
IHJ54_RS08775	COG0308	aminopeptidase N
IHJ54_RS08780	COG0167	dihydroorotate dehydrogenase activity
IHJ54_RS08790	COG3217	Mosc domain protein beta barrel domain protein
IHJ54_RS08790	COG0633	Ferredoxin
IHJ54_RS08795	COG0116	Belongs to the methyltransferase superfamily
IHJ54_RS08795	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
IHJ54_RS08800	COG0488	(ABC) transporter
IHJ54_RS08805	COG2995	paraquat-inducible protein a
IHJ54_RS08810	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
IHJ54_RS08810	COG3008	intermembrane lipid transfer
IHJ54_RS08815	COG3009	Protein conserved in bacteria
IHJ54_RS08820	COG3130	regulation of translation
IHJ54_RS08825	COG0840	transmembrane signaling receptor activity
IHJ54_RS08860	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
IHJ54_RS08865	COG3381	protein complex oligomerization
IHJ54_RS08875	COG2999	glutathione oxidoreductase activity
IHJ54_RS08880	COG0477	Major facilitator Superfamily
IHJ54_RS08885	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IHJ54_RS08890	COG3132	Protein of unknown function, DUF480
IHJ54_RS08900	COG0728	peptidoglycan biosynthetic process
IHJ54_RS08905	COG0018	arginyl-trna synthetase
IHJ54_RS08910	COG3102	Protein conserved in bacteria
IHJ54_RS08915	COG3142	Participates in the control of copper homeostasis
IHJ54_RS08920	COG0500	methyltransferase
IHJ54_RS08925	COG2226	methyltransferase
IHJ54_RS08930	COG3788	relative of glutathione S-transferase, MAPEG superfamily
IHJ54_RS08935	COG1801	Protein of unknown function DUF72
IHJ54_RS08940	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
IHJ54_RS08950	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
IHJ54_RS08955	COG0494	nUDIX hydrolase
IHJ54_RS08960	COG0217	transcriptional regulatory protein
IHJ54_RS08965	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
IHJ54_RS08970	COG0632	four-way junction helicase activity
IHJ54_RS08975	COG2255	four-way junction helicase activity
IHJ54_RS08980	COG4580	involved in the transport of maltose and maltodextrins
IHJ54_RS08985	COG1447	Phosphotransferase system cellobiose-specific component IIA
IHJ54_RS08990	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IHJ54_RS08995	COG1609	Transcriptional regulator
IHJ54_RS09000	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IHJ54_RS09005	COG1121	(ABC) transporter
IHJ54_RS09010	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
IHJ54_RS09015	COG0739	heme binding
IHJ54_RS09020	COG1560	Kdo2-lipid A biosynthetic process
IHJ54_RS09025	COG0469	pyruvate kinase activity
IHJ54_RS09030	COG1737	Transcriptional regulator
IHJ54_RS09035	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
IHJ54_RS09040	COG0800	Aldolase
IHJ54_RS09045	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
IHJ54_RS09050	COG1770	oligopeptidase
IHJ54_RS09060	COG1528	Iron-storage protein
IHJ54_RS09070	COG1278	Cold shock
IHJ54_RS09090	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
IHJ54_RS09105	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
IHJ54_RS09105	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IHJ54_RS09110	COG3008	intermembrane lipid transfer
IHJ54_RS09115	COG2995	paraquat-inducible protein a
IHJ54_RS09120	COG1956	GAF domain-containing protein
IHJ54_RS09125	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
IHJ54_RS09135	COG2207	Transcriptional regulator
IHJ54_RS09150	COG2223	nitrite transmembrane transporter activity
IHJ54_RS09155	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IHJ54_RS09165	COG1177	transmembrane transport
IHJ54_RS09175	COG3842	ATPase activity
IHJ54_RS09180	COG2195	Cleaves the N-terminal amino acid of tripeptides
IHJ54_RS09185	COG2850	peptidyl-arginine hydroxylation
IHJ54_RS09200	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IHJ54_RS09205	COG2915	High frequency lysogenization protein hflD homolog
IHJ54_RS09210	COG0482	sulfurtransferase activity
IHJ54_RS09220	COG1187	pseudouridine synthase activity
IHJ54_RS09225	COG0538	isocitrate dehydrogenase activity
IHJ54_RS09230	COG0348	domain, Protein
IHJ54_RS09255	COG3275	phosphorelay sensor kinase activity
IHJ54_RS09260	COG3279	Response regulator of the LytR AlgR family
IHJ54_RS09265	COG2223	nitrite transmembrane transporter activity
IHJ54_RS09270	COG1653	transport
IHJ54_RS09280	COG0501	Belongs to the peptidase M48B family
IHJ54_RS09285	COG0823	Involved in the tonB-independent uptake of proteins
IHJ54_RS09305	COG1113	amino acid transport
IHJ54_RS09310	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
IHJ54_RS09315	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
IHJ54_RS09320	COG0291	Belongs to the bacterial ribosomal protein bL35 family
IHJ54_RS09325	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
IHJ54_RS09335	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
IHJ54_RS09340	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IHJ54_RS09340	COG0072	phenylalanine-tRNA ligase activity
IHJ54_RS09345	COG0776	regulation of translation
IHJ54_RS09355	COG1132	(ABC) transporter
IHJ54_RS09365	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
IHJ54_RS09370	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IHJ54_RS09375	COG1823	symporter activity
IHJ54_RS09380	COG1988	membrane-bound metal-dependent
IHJ54_RS09385	COG2755	lipolytic protein G-D-S-L family
IHJ54_RS09385	COG0657	acetylesterase activity
IHJ54_RS09390	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
IHJ54_RS09400	COG3842	ATPase activity
IHJ54_RS09405	COG0395	ABC-type sugar transport system, permease component
IHJ54_RS09410	COG1175	transmembrane transport
IHJ54_RS09420	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS09425	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
IHJ54_RS09430	COG1917	Cupin 2, conserved barrel domain protein
IHJ54_RS09435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IHJ54_RS09445	COG3001	Fructosamine kinase
IHJ54_RS09450	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IHJ54_RS09455	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IHJ54_RS09460	COG1121	(ABC) transporter
IHJ54_RS09465	COG0803	Belongs to the bacterial solute-binding protein 9 family
IHJ54_RS09480	COG2226	methyltransferase
IHJ54_RS09485	COG1971	Probably functions as a manganese efflux pump
IHJ54_RS09490	COG4811	Protein of unknown function (DUF986)
IHJ54_RS09495	COG3716	PTS system mannose fructose sorbose family IID component
IHJ54_RS09500	COG3715	PTS system
IHJ54_RS09505	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IHJ54_RS09505	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
IHJ54_RS09510	COG1253	flavin adenine dinucleotide binding
IHJ54_RS09515	COG1760	l-serine dehydratase
IHJ54_RS09520	COG0494	nUDIX hydrolase
IHJ54_RS09530	COG3140	Belongs to the UPF0181 family
IHJ54_RS09535	COG0251	oxidation-reduction process
IHJ54_RS09540	COG1199	ATP-dependent helicase activity
IHJ54_RS09550	COG3065	identical protein binding
IHJ54_RS09555	COG0318	PFAM AMP-dependent synthetase and ligase
IHJ54_RS09560	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
IHJ54_RS09565	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
IHJ54_RS09570	COG2894	cell division
IHJ54_RS09575	COG0850	regulation of cytokinetic process
IHJ54_RS09580	COG3100	YcgL domain-containing protein
IHJ54_RS09585	COG0179	Fumarylacetoacetate (FAA) hydrolase
IHJ54_RS09590	COG2983	Belongs to the UPF0260 family
IHJ54_RS09600	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
IHJ54_RS09605	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
IHJ54_RS09610	COG2186	Transcriptional regulator
IHJ54_RS09615	COG2719	SpoVR family
IHJ54_RS09620	COG3684	Belongs to the aldolase LacD family
IHJ54_RS09630	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IHJ54_RS09650	COG0205	6-phosphofructokinase activity
IHJ54_RS09655	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IHJ54_RS09670	COG2718	Belongs to the UPF0229 family
IHJ54_RS09675	COG2766	serine protein kinase
IHJ54_RS09680	COG3713	MltA-interacting MipA family protein
IHJ54_RS09685	COG0656	L-ascorbic acid biosynthetic process
IHJ54_RS09700	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IHJ54_RS09705	COG3139	Protein of unknown function (DUF1315)
IHJ54_RS09710	COG1335	isochorismatase
IHJ54_RS09715	COG0252	asparaginase activity
IHJ54_RS09720	COG0616	signal peptide processing
IHJ54_RS09725	COG0778	Nitroreductase
IHJ54_RS09730	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IHJ54_RS09740	COG0708	Exodeoxyribonuclease III
IHJ54_RS09745	COG2860	membrane
IHJ54_RS09760	COG0788	formyltetrahydrofolate deformylase activity
IHJ54_RS09765	COG3012	SEC-C Motif Domain Protein
IHJ54_RS09770	COG1752	Esterase of the alpha-beta hydrolase superfamily
IHJ54_RS09775	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS09780	COG1210	Utp--glucose-1-phosphate uridylyltransferase
IHJ54_RS09790	COG1435	thymidine kinase activity
IHJ54_RS09795	COG1454	alcohol dehydrogenase
IHJ54_RS09795	COG1012	belongs to the aldehyde dehydrogenase family
IHJ54_RS09810	COG0601	transmembrane transport
IHJ54_RS09815	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS09820	COG0444	Belongs to the ABC transporter superfamily
IHJ54_RS09830	COG3099	Belongs to the UPF0263 family
IHJ54_RS09835	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IHJ54_RS09850	COG2350	Protein conserved in bacteria
IHJ54_RS09860	COG1607	acyl-coa hydrolase
IHJ54_RS09865	COG2917	probably involved in intracellular septation
IHJ54_RS09875	COG3047	cAMP biosynthetic process
IHJ54_RS09880	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
IHJ54_RS09885	COG0159	tryptophan synthase activity
IHJ54_RS09890	COG0133	tryptophan synthase activity
IHJ54_RS09895	COG0134	indole-3-glycerol-phosphate synthase activity
IHJ54_RS09895	COG0135	phosphoribosylanthranilate isomerase activity
IHJ54_RS09900	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
IHJ54_RS09905	COG0512	Glutamine amidotransferase of anthranilate synthase
IHJ54_RS09915	COG0613	PHP domain protein
IHJ54_RS09920	COG0009	L-threonylcarbamoyladenylate synthase
IHJ54_RS09925	COG1187	pseudouridine synthase activity
IHJ54_RS09930	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
IHJ54_RS09935	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS09940	COG0616	signal peptide processing
IHJ54_RS09960	COG3104	oligopeptide transport
IHJ54_RS09965	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IHJ54_RS09975	COG4659	FMN binding
IHJ54_RS09980	COG4658	electron transport chain
IHJ54_RS09985	COG4656	Part of a membrane complex involved in electron transport
IHJ54_RS09990	COG2878	Part of a membrane complex involved in electron transport
IHJ54_RS09995	COG4657	Part of a membrane complex involved in electron transport
IHJ54_RS10005	COG2160	L-arabinose isomerase activity
IHJ54_RS10010	COG1069	ribulokinase activity
IHJ54_RS10015	COG1879	ABC-type sugar transport system periplasmic component
IHJ54_RS10020	COG1129	ABC transporter
IHJ54_RS10025	COG1172	Belongs to the binding-protein-dependent transport system permease family
IHJ54_RS10035	COG0673	inositol 2-dehydrogenase activity
IHJ54_RS10040	COG0385	Bile acid
IHJ54_RS10050	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
IHJ54_RS10060	COG5339	Protein conserved in bacteria
IHJ54_RS10065	COG1482	cell wall glycoprotein biosynthetic process
IHJ54_RS10070	COG0114	fumarate hydratase activity
IHJ54_RS10080	COG2814	Major facilitator Superfamily
IHJ54_RS10085	COG0583	DNA-binding transcription factor activity
IHJ54_RS10090	COG1940	carbohydrate kinase activity
IHJ54_RS10095	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
IHJ54_RS10100	COG0477	Major facilitator Superfamily
IHJ54_RS10120	COG4221	oxidoreductase activity
IHJ54_RS10125	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
IHJ54_RS10130	COG1215	transferase activity, transferring glycosyl groups
IHJ54_RS10145	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
IHJ54_RS10150	COG1942	4-Oxalocrotonate Tautomerase
IHJ54_RS10160	COG0076	glutamate decarboxylase activity
IHJ54_RS10165	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IHJ54_RS10180	COG1649	PFAM Uncharacterised BCR, COG1649
IHJ54_RS10185	COG4628	conserved protein (DUF2132)
IHJ54_RS10225	COG0456	acetyltransferase
IHJ54_RS10230	COG0738	Major facilitator superfamily
IHJ54_RS10240	COG3783	Cytochrome b(562)
IHJ54_RS10245	COG1764	response to oxidative stress
IHJ54_RS10250	COG4305	rare lipoprotein A
IHJ54_RS10280	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
IHJ54_RS10295	COG0673	inositol 2-dehydrogenase activity
IHJ54_RS10300	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IHJ54_RS10305	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IHJ54_RS10315	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
IHJ54_RS10320	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
IHJ54_RS10330	COG2877	3-deoxy-8-phosphooctulonate synthase activity
IHJ54_RS10335	COG2912	Transglutaminase-like superfamily
IHJ54_RS10345	COG2890	protein-(glutamine-N5) methyltransferase activity
IHJ54_RS10350	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
IHJ54_RS10355	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
IHJ54_RS10360	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
IHJ54_RS10365	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
IHJ54_RS10370	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IHJ54_RS10380	COG0193	aminoacyl-tRNA hydrolase activity
IHJ54_RS10385	COG0012	GTP binding
IHJ54_RS10415	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
IHJ54_RS10435	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
IHJ54_RS10445	COG0583	DNA-binding transcription factor activity
IHJ54_RS10450	COG0583	DNA-binding transcription factor activity
IHJ54_RS10455	COG2271	Major facilitator Superfamily
IHJ54_RS10460	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS10465	COG3959	Transketolase, thiamine diphosphate binding domain
IHJ54_RS10470	COG3958	Transketolase
IHJ54_RS10505	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IHJ54_RS10520	COG2755	lipolytic protein G-D-S-L family
IHJ54_RS10525	COG0523	cobalamin synthesis protein
IHJ54_RS10530	COG3443	Belongs to the bacterial solute-binding protein 9 family
IHJ54_RS10535	COG0346	lactoylglutathione lyase activity
IHJ54_RS10540	COG0483	inositol monophosphate 1-phosphatase activity
IHJ54_RS10545	COG2723	6-phospho-beta-galactosidase activity
IHJ54_RS10550	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IHJ54_RS10550	COG1263	PTS System
IHJ54_RS10555	COG1609	Transcriptional regulator
IHJ54_RS10575	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IHJ54_RS10580	COG1473	amidohydrolase
IHJ54_RS10590	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IHJ54_RS10600	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
IHJ54_RS10610	COG0765	amino acid transport
IHJ54_RS10615	COG1126	abc transporter atp-binding protein
IHJ54_RS10625	COG2314	TM2 domain
IHJ54_RS10645	COG1129	ABC transporter
IHJ54_RS10665	COG1802	Transcriptional regulator
IHJ54_RS10765	COG3210	domain, Protein
IHJ54_RS10770	COG2831	hemolysin activation secretion protein
IHJ54_RS10775	COG1802	Transcriptional regulator
IHJ54_RS10825	COG3501	Rhs element vgr protein
IHJ54_RS10870	COG4669	(LipO)protein
IHJ54_RS10885	COG2200	EAL domain
IHJ54_RS10895	COG2197	response regulator
IHJ54_RS10900	COG3850	Histidine kinase
IHJ54_RS10925	COG1157	protein secretion by the type III secretion system
IHJ54_RS10950	COG4794	Type iii secretion
IHJ54_RS10960	COG4792	protein secretion
IHJ54_RS10965	COG0583	DNA-binding transcription factor activity
IHJ54_RS10980	COG1464	Belongs to the NlpA lipoprotein family
IHJ54_RS10985	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS10990	COG2011	ABC-type metal ion transport system permease component
IHJ54_RS10995	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IHJ54_RS11000	COG0671	phosphoesterase, PA-phosphatase related
IHJ54_RS11010	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IHJ54_RS11020	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS11030	COG1176	ABC-type spermidine putrescine transport system, permease component I
IHJ54_RS11040	COG1012	belongs to the aldehyde dehydrogenase family
IHJ54_RS11045	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IHJ54_RS11055	COG3842	ATPase activity
IHJ54_RS11060	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS11075	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
IHJ54_RS11090	COG2261	transglycosylase associated protein
IHJ54_RS11095	COG5290	Psort location Cytoplasmic, score
IHJ54_RS11125	COG1846	Transcriptional regulator
IHJ54_RS11130	COG0697	spore germination
IHJ54_RS11135	COG2181	nitrate reductase activity
IHJ54_RS11140	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
IHJ54_RS11145	COG1140	nitrate reductase beta subunit
IHJ54_RS11150	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
IHJ54_RS11155	COG2223	nitrite transmembrane transporter activity
IHJ54_RS11160	COG3850	Histidine kinase
IHJ54_RS11165	COG2197	response regulator
IHJ54_RS11180	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
IHJ54_RS11190	COG0387	Pfam Sodium calcium exchanger
IHJ54_RS11195	COG0659	secondary active sulfate transmembrane transporter activity
IHJ54_RS11205	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS11235	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS11240	COG2205	protein histidine kinase activity
IHJ54_RS11255	COG3591	Belongs to the peptidase S1B family
IHJ54_RS11260	COG3300	MHYT domain
IHJ54_RS11260	COG5001	Diguanylate cyclase
IHJ54_RS11270	COG1643	Atp-dependent helicase
IHJ54_RS11275	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
IHJ54_RS11290	COG0840	transmembrane signaling receptor activity
IHJ54_RS11295	COG0840	transmembrane signaling receptor activity
IHJ54_RS11300	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IHJ54_RS11500	COG1802	Transcriptional regulator
IHJ54_RS11500	COG4626	Terminase
IHJ54_RS11570	COG0037	tRNA processing
IHJ54_RS11580	COG0598	Magnesium transport protein CorA
IHJ54_RS11585	COG4166	transmembrane transport
IHJ54_RS11590	COG2866	Carboxypeptidase
IHJ54_RS11595	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
IHJ54_RS11605	COG0514	ATP-dependent DNA helicase (RecQ)
IHJ54_RS11620	COG3768	UPF0283 membrane protein
IHJ54_RS11625	COG3106	COG3106 Predicted ATPase
IHJ54_RS11630	COG2831	hemolysin activation secretion protein
IHJ54_RS11670	COG1983	PspC domain protein
IHJ54_RS11680	COG1842	Phage shock protein A
IHJ54_RS11685	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
IHJ54_RS11705	COG4166	transmembrane transport
IHJ54_RS11715	COG4171	peptide transport system, permease
IHJ54_RS11755	COG2271	Major facilitator Superfamily
IHJ54_RS11765	COG0583	DNA-binding transcription factor activity
IHJ54_RS11770	COG0243	molybdopterin cofactor binding
IHJ54_RS11775	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
IHJ54_RS11780	COG4989	oxidoreductase activity
IHJ54_RS11785	COG1966	Carbon starvation protein
IHJ54_RS11790	COG0235	Class ii aldolase
IHJ54_RS11800	COG0023	Translation Initiation Factor
IHJ54_RS11805	COG0284	orotidine-5'-phosphate decarboxylase activity
IHJ54_RS11810	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
IHJ54_RS11815	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
IHJ54_RS11825	COG1082	Xylose isomerase domain protein TIM barrel
IHJ54_RS11830	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
IHJ54_RS11835	COG3958	Transketolase
IHJ54_RS11840	COG3959	Transketolase, thiamine diphosphate binding domain
IHJ54_RS11845	COG1172	Belongs to the binding-protein-dependent transport system permease family
IHJ54_RS11850	COG1129	ABC transporter
IHJ54_RS11860	COG1879	ABC-type sugar transport system periplasmic component
IHJ54_RS11865	COG0671	phosphoesterase, PA-phosphatase related
IHJ54_RS11870	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
IHJ54_RS11880	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
IHJ54_RS11885	COG1301	dicarboxylic acid transport
IHJ54_RS11890	COG0625	glutathione transferase activity
IHJ54_RS11895	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
IHJ54_RS11900	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
IHJ54_RS11905	COG0259	pyridoxamine-phosphate oxidase activity
IHJ54_RS11910	COG3895	Periplasmic Protein
IHJ54_RS11915	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
IHJ54_RS11930	COG3313	Fe-S protein
IHJ54_RS11935	COG0346	lactoylglutathione lyase activity
IHJ54_RS11940	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IHJ54_RS11945	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
IHJ54_RS11950	COG0791	NLP P60 protein
IHJ54_RS11960	COG1609	Transcriptional regulator
IHJ54_RS11965	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
IHJ54_RS11970	COG0307	riboflavin synthase, alpha
IHJ54_RS11975	COG0534	Mate efflux family protein
IHJ54_RS12000	COG3665	Urea carboxylase-associated protein
IHJ54_RS12005	COG1116	anion transmembrane transporter activity
IHJ54_RS12010	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IHJ54_RS12030	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
IHJ54_RS12035	COG1408	metallophosphoesterase
IHJ54_RS12045	COG0561	phosphatase activity
IHJ54_RS12050	COG2076	Multidrug Resistance protein
IHJ54_RS12070	COG2197	response regulator
IHJ54_RS12075	COG3850	Histidine kinase
IHJ54_RS12080	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
IHJ54_RS12080	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IHJ54_RS12090	COG0243	molybdopterin cofactor binding
IHJ54_RS12095	COG0437	4 iron, 4 sulfur cluster binding
IHJ54_RS12100	COG0348	domain, Protein
IHJ54_RS12105	COG3043	anaerobic respiration
IHJ54_RS12110	COG3005	denitrification pathway
IHJ54_RS12115	COG3547	Transposase (IS116 IS110 IS902 family)
IHJ54_RS12120	COG3088	subunit of a heme lyase
IHJ54_RS12120	COG4235	cytochrome complex assembly
IHJ54_RS12125	COG4235	cytochrome complex assembly
IHJ54_RS12125	COG3088	subunit of a heme lyase
IHJ54_RS12130	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
IHJ54_RS12135	COG1138	Cytochrome C-type biogenesis protein
IHJ54_RS12140	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
IHJ54_RS12145	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IHJ54_RS12150	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IHJ54_RS12155	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
IHJ54_RS12160	COG4133	protoheme IX ABC transporter activity
IHJ54_RS12165	COG4235	cytochrome complex assembly
IHJ54_RS12170	COG3088	subunit of a heme lyase
IHJ54_RS12175	COG1138	Cytochrome C-type biogenesis protein
IHJ54_RS12180	COG3301	Polysulphide reductase, NrfD
IHJ54_RS12185	COG0437	4 iron, 4 sulfur cluster binding
IHJ54_RS12190	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
IHJ54_RS12195	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
IHJ54_RS12205	COG2382	esterase
IHJ54_RS12235	COG4238	major outer membrane lipoprotein
IHJ54_RS12240	COG1388	LysM domain
IHJ54_RS12240	COG1376	ErfK ybiS ycfS ynhG family protein
IHJ54_RS12245	COG2166	iron-sulfur cluster assembly
IHJ54_RS12250	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IHJ54_RS12255	COG0719	Fe-S assembly protein
IHJ54_RS12260	COG0396	ATPase activity
IHJ54_RS12265	COG0719	Fe-S assembly protein
IHJ54_RS12270	COG0316	Belongs to the HesB IscA family
IHJ54_RS12280	COG2050	protein possibly involved in aromatic compounds catabolism
IHJ54_RS12285	COG0277	FAD linked oxidase domain protein
IHJ54_RS12285	COG0247	lactate metabolic process
IHJ54_RS12290	COG0628	permease
IHJ54_RS12300	COG1477	protein flavinylation
IHJ54_RS12305	COG0574	Belongs to the PEP-utilizing enzyme family
IHJ54_RS12305	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IHJ54_RS12310	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
IHJ54_RS12315	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IHJ54_RS12320	COG3720	iron ion transport
IHJ54_RS12325	COG4558	Periplasmic binding protein
IHJ54_RS12330	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IHJ54_RS12335	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
IHJ54_RS12340	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
IHJ54_RS12350	COG0095	Lipoate-protein ligase
IHJ54_RS12355	COG0791	NLP P60 protein
IHJ54_RS12360	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
IHJ54_RS12365	COG0386	Belongs to the glutathione peroxidase family
IHJ54_RS12370	COG4139	cobalamin transport
IHJ54_RS12375	COG2226	methyltransferase
IHJ54_RS12390	COG1940	carbohydrate kinase activity
IHJ54_RS12395	COG4591	ABC-type transport system involved in lipoprotein release permease component
IHJ54_RS12400	COG1136	(ABC) transporter
IHJ54_RS12405	COG4591	ABC-type transport system involved in lipoprotein release permease component
IHJ54_RS12410	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IHJ54_RS12415	COG0443	Heat shock 70 kDa protein
IHJ54_RS12420	COG1309	transcriptional regulator
IHJ54_RS12435	COG3134	Outer membrane lipoprotein
IHJ54_RS12440	COG1252	NADH dehydrogenase
IHJ54_RS12445	COG3150	esterase
IHJ54_RS12450	COG1472	Belongs to the glycosyl hydrolase 3 family
IHJ54_RS12460	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
IHJ54_RS12470	COG0537	adenosine 5'-monophosphoramidase activity
IHJ54_RS12475	COG0477	Major facilitator Superfamily
IHJ54_RS12485	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IHJ54_RS12485	COG1263	PTS System
IHJ54_RS12490	COG0084	hydrolase, TatD family'
IHJ54_RS12495	COG0470	DNA polymerase III
IHJ54_RS12500	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
IHJ54_RS12505	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
IHJ54_RS12510	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
IHJ54_RS12515	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IHJ54_RS12520	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
IHJ54_RS12530	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
IHJ54_RS12535	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IHJ54_RS12540	COG0416	fatty acid biosynthetic process
IHJ54_RS12545	COG0333	Belongs to the bacterial ribosomal protein bL32 family
IHJ54_RS12550	COG1399	metal-binding, possibly nucleic acid-binding protein
IHJ54_RS12555	COG0424	maF-like protein
IHJ54_RS12560	COG0564	pseudouridine synthase activity
IHJ54_RS12565	COG1530	ribonuclease E activity
IHJ54_RS12565	COG1530	ribonuclease E activity
IHJ54_RS12570	COG3385	transposase activity
IHJ54_RS12580	COG0418	dihydroorotase activity
IHJ54_RS12600	COG3038	cytochrome b561
IHJ54_RS12605	COG2353	YceI-like domain
IHJ54_RS12610	COG1054	Belongs to the UPF0176 family
IHJ54_RS12615	COG1902	pentaerythritol trinitrate reductase activity
IHJ54_RS12620	COG1560	Kdo2-lipid A biosynthetic process
IHJ54_RS12625	COG2943	transferase activity, transferring hexosyl groups
IHJ54_RS12630	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
IHJ54_RS12645	COG0840	transmembrane signaling receptor activity
IHJ54_RS12665	COG0589	response to stress
IHJ54_RS12695	COG0670	Belongs to the BI1 family
IHJ54_RS12700	COG2920	part of a sulfur-relay system
IHJ54_RS12705	COG1254	Belongs to the acylphosphatase family
IHJ54_RS12710	COG3785	DNA binding
IHJ54_RS12715	COG1832	CoA-binding protein
IHJ54_RS12725	COG1803	Methylglyoxal synthase
IHJ54_RS12730	COG0210	DNA helicase
IHJ54_RS12735	COG3304	Inner membrane component domain
IHJ54_RS12740	COG1289	transmembrane transporter activity
IHJ54_RS12745	COG3070	regulator of competence-specific genes
IHJ54_RS12750	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
IHJ54_RS12760	COG3385	transposase activity
IHJ54_RS12770	COG1067	ATP-dependent peptidase activity
IHJ54_RS12775	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
IHJ54_RS12780	COG2979	Protein of unknown function (DUF533)
IHJ54_RS12785	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
IHJ54_RS12790	COG1012	belongs to the aldehyde dehydrogenase family
IHJ54_RS12795	COG1309	transcriptional regulator
IHJ54_RS12800	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
IHJ54_RS12815	COG1702	phosphate starvation-inducible protein PhoH
IHJ54_RS12825	COG1191	sigma factor activity
IHJ54_RS12865	COG0500	methyltransferase
IHJ54_RS12890	COG1677	Flagellar hook-basal body complex protein FliE
IHJ54_RS12905	COG1317	bacterial-type flagellum organization
IHJ54_RS12925	COG1580	Controls the rotational direction of flagella during chemotaxis
IHJ54_RS12975	COG1706	bacterial-type flagellum-dependent cell motility
IHJ54_RS12980	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
IHJ54_RS12990	COG4787	bacterial-type flagellum-dependent cell motility
IHJ54_RS12995	COG1749	Flagellar hook protein flgE
IHJ54_RS13000	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
IHJ54_RS13005	COG1558	bacterial-type flagellum-dependent cell motility
IHJ54_RS13010	COG1815	bacterial-type flagellum-dependent cell motility
IHJ54_RS13020	COG2747	anti-sigma28 factor FlgM
IHJ54_RS13035	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
IHJ54_RS13040	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
IHJ54_RS13050	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS13055	COG2201	protein-glutamate methylesterase activity
IHJ54_RS13060	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
IHJ54_RS13065	COG0840	transmembrane signaling receptor activity
IHJ54_RS13070	COG0835	chemotaxis
IHJ54_RS13075	COG2198	Histidine kinase
IHJ54_RS13075	COG0643	Histidine kinase
IHJ54_RS13100	COG0697	spore germination
IHJ54_RS13105	COG0840	transmembrane signaling receptor activity
IHJ54_RS13130	COG0583	DNA-binding transcription factor activity
IHJ54_RS13135	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IHJ54_RS13170	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IHJ54_RS13175	COG0322	excinuclease ABC activity
IHJ54_RS13180	COG2197	response regulator
IHJ54_RS13200	COG1113	amino acid transport
IHJ54_RS13220	COG2828	Protein conserved in bacteria
IHJ54_RS13235	COG2814	Major facilitator Superfamily
IHJ54_RS13240	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IHJ54_RS13260	COG2951	lytic endotransglycosylase activity
IHJ54_RS13265	COG0481	GTPase activity
IHJ54_RS13270	COG0659	secondary active sulfate transmembrane transporter activity
IHJ54_RS13275	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS13295	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS13300	COG5000	phosphorelay sensor kinase activity
IHJ54_RS13300	COG5002	protein histidine kinase activity
IHJ54_RS13315	COG0765	amino acid transport
IHJ54_RS13320	COG0765	amino acid transport
IHJ54_RS13325	COG1126	abc transporter atp-binding protein
IHJ54_RS13345	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
IHJ54_RS13380	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS13430	COG1902	pentaerythritol trinitrate reductase activity
IHJ54_RS13435	COG0640	Transcriptional regulator
IHJ54_RS13440	COG1070	Carbohydrate kinase
IHJ54_RS13445	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IHJ54_RS13455	COG1172	Belongs to the binding-protein-dependent transport system permease family
IHJ54_RS13460	COG1172	Belongs to the binding-protein-dependent transport system permease family
IHJ54_RS13465	COG1129	ABC transporter
IHJ54_RS13475	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
IHJ54_RS13480	COG4807	Protein conserved in bacteria
IHJ54_RS13485	COG5464	transposase or invertase
IHJ54_RS13490	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
IHJ54_RS13490	COG1648	precorrin-2 dehydrogenase activity
IHJ54_RS13495	COG0243	molybdopterin cofactor binding
IHJ54_RS13500	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IHJ54_RS13500	COG2146	nitrite reductase [NAD(P)H] activity
IHJ54_RS13505	COG1116	anion transmembrane transporter activity
IHJ54_RS13515	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
IHJ54_RS13520	COG3707	response regulator
IHJ54_RS13535	COG1271	oxidase subunit
IHJ54_RS13540	COG1294	oxidase, subunit
IHJ54_RS13545	COG4890	Cyd operon protein YbgT
IHJ54_RS13550	COG0641	radical SAM
IHJ54_RS13555	COG2190	(PTS) system
IHJ54_RS13555	COG1263	PTS System
IHJ54_RS13555	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IHJ54_RS13570	COG1737	Transcriptional regulator
IHJ54_RS13575	COG2149	membrane
IHJ54_RS13585	COG3058	Necessary for formate dehydrogenase activity
IHJ54_RS13590	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IHJ54_RS13595	COG0519	Catalyzes the synthesis of GMP from XMP
IHJ54_RS13600	COG4993	Dehydrogenase
IHJ54_RS13625	COG4771	TonB-dependent receptor
IHJ54_RS13635	COG0488	(ABC) transporter
IHJ54_RS13650	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IHJ54_RS13650	COG1263	PTS System
IHJ54_RS13655	COG0366	Alpha amylase catalytic
IHJ54_RS13660	COG4575	ribosome binding
IHJ54_RS13665	COG1007	ATP synthesis coupled electron transport
IHJ54_RS13670	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IHJ54_RS13675	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
IHJ54_RS13680	COG0713	ATP synthesis coupled electron transport
IHJ54_RS13685	COG0839	Belongs to the complex I subunit 6 family
IHJ54_RS13690	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IHJ54_RS13695	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
IHJ54_RS13710	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
IHJ54_RS13715	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IHJ54_RS13715	COG0649	NAD binding
IHJ54_RS13720	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
IHJ54_RS13730	COG0583	DNA-binding transcription factor activity
IHJ54_RS13735	COG0436	Aminotransferase
IHJ54_RS13740	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
IHJ54_RS13745	COG0490	domain, Protein
IHJ54_RS13745	COG0471	metal ion transport
IHJ54_RS13750	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IHJ54_RS13755	COG3013	Belongs to the UPF0304 family
IHJ54_RS13760	COG3092	negative regulation of chromosome organization
IHJ54_RS13765	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IHJ54_RS13770	COG0857	belongs to the CobB CobQ family
IHJ54_RS13770	COG0280	phosphate acetyltransferase
IHJ54_RS13775	COG3739	integral membrane protein
IHJ54_RS13780	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
IHJ54_RS13785	COG0622	Phosphoesterase
IHJ54_RS13790	COG0625	glutathione transferase activity
IHJ54_RS13795	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
IHJ54_RS13800	COG1090	epimerase
IHJ54_RS13805	COG4598	ABC transporter
IHJ54_RS13810	COG4160	amino acid transport
IHJ54_RS13825	COG0163	prenyltransferase activity
IHJ54_RS13830	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
IHJ54_RS13835	COG1286	toxin biosynthetic process
IHJ54_RS13840	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
IHJ54_RS13845	COG0285	dihydrofolate synthase activity
IHJ54_RS13850	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
IHJ54_RS13855	COG0586	Pfam SNARE associated Golgi protein
IHJ54_RS13860	COG0101	tRNA pseudouridine synthase activity
IHJ54_RS13865	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IHJ54_RS13870	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IHJ54_RS13875	COG0697	spore germination
IHJ54_RS13885	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
IHJ54_RS13890	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
IHJ54_RS13890	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
IHJ54_RS13900	COG3101	peptidyl-lysine hydroxylation
IHJ54_RS13905	COG0730	response to heat
IHJ54_RS13910	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
IHJ54_RS13915	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
IHJ54_RS13920	COG2890	protein-(glutamine-N5) methyltransferase activity
IHJ54_RS13925	COG2840	Smr protein MutS2
IHJ54_RS13930	COG2062	phosphohistidine phosphatase, SixA
IHJ54_RS13950	COG3188	usher protein
IHJ54_RS13960	COG1024	Enoyl-CoA hydratase
IHJ54_RS13960	COG1250	3-hydroxyacyl-CoA dehydrogenase
IHJ54_RS13965	COG0183	Belongs to the thiolase family
IHJ54_RS13975	COG4106	trans-aconitate 2-methyltransferase activity
IHJ54_RS13980	COG3691	Protein conserved in bacteria
IHJ54_RS13985	COG2067	long-chain fatty acid transport protein
IHJ54_RS13990	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS13995	COG0583	DNA-binding transcription factor activity
IHJ54_RS14000	COG0579	oxidoreductase
IHJ54_RS14010	COG2116	formate transmembrane transporter activity
IHJ54_RS14020	COG0582	viral genome integration into host DNA
IHJ54_RS14150	COG0513	Belongs to the DEAD box helicase family
IHJ54_RS14160	COG1120	ATPase activity
IHJ54_RS14165	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IHJ54_RS14170	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IHJ54_RS14175	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IHJ54_RS14255	COG3866	Pectate lyase
IHJ54_RS14260	COG3266	domain, Protein
IHJ54_RS14270	COG0436	Aminotransferase
IHJ54_RS14275	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS14285	COG3264	Mechanosensitive ion channel
IHJ54_RS14285	COG1511	domain protein
IHJ54_RS14310	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
IHJ54_RS14325	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
IHJ54_RS14330	COG1696	Membrane protein involved in D-alanine export
IHJ54_RS14360	COG1447	Phosphotransferase system cellobiose-specific component IIA
IHJ54_RS14375	COG3842	ATPase activity
IHJ54_RS14380	COG2076	Multidrug Resistance protein
IHJ54_RS14385	COG2076	Multidrug Resistance protein
IHJ54_RS14390	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
IHJ54_RS14395	COG0726	polysaccharide deacetylase
IHJ54_RS14400	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
IHJ54_RS14400	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IHJ54_RS14405	COG0463	Glycosyl transferase, family 2
IHJ54_RS14410	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
IHJ54_RS14415	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
IHJ54_RS14420	COG5001	Diguanylate cyclase
IHJ54_RS14420	COG4251	negative regulation of phosphorylation
IHJ54_RS14420	COG3706	GGDEF domain
IHJ54_RS14420	COG2203	Gaf domain
IHJ54_RS14425	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
IHJ54_RS14430	COG2501	S4 domain
IHJ54_RS14435	COG0215	cysteine-tRNA ligase activity
IHJ54_RS14445	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IHJ54_RS14450	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
IHJ54_RS14455	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
IHJ54_RS14460	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
IHJ54_RS14465	COG0814	amino acid
IHJ54_RS14470	COG1760	l-serine dehydratase
IHJ54_RS14480	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
IHJ54_RS14485	COG0581	inorganic phosphate transmembrane transporter activity
IHJ54_RS14490	COG0573	inorganic phosphate transmembrane transporter activity
IHJ54_RS14495	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
IHJ54_RS14515	COG1764	response to oxidative stress
IHJ54_RS14520	COG1846	Transcriptional regulator
IHJ54_RS14525	COG2239	Acts as a magnesium transporter
IHJ54_RS14540	COG1609	Transcriptional regulator
IHJ54_RS14545	COG4580	involved in the transport of maltose and maltodextrins
IHJ54_RS14555	COG3842	ATPase activity
IHJ54_RS14560	COG2182	Extracellular solute-binding protein
IHJ54_RS14565	COG1175	transmembrane transport
IHJ54_RS14570	COG3833	ABC-type maltose transport systems, permease component
IHJ54_RS14575	COG3867	Arabinogalactan endo-beta-1,4-galactanase
IHJ54_RS14580	COG1874	Beta-galactosidase
IHJ54_RS14595	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IHJ54_RS14600	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IHJ54_RS14605	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IHJ54_RS14610	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IHJ54_RS14615	COG0477	Major facilitator Superfamily
IHJ54_RS14620	COG2205	protein histidine kinase activity
IHJ54_RS14625	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS14640	COG0435	Glutathione S-transferase
IHJ54_RS14645	COG0826	peptidase U32
IHJ54_RS14650	COG1597	lipid kinase activity
IHJ54_RS14655	COG3223	Belongs to the PsiE family
IHJ54_RS14660	COG0351	phosphomethylpyrimidine kinase
IHJ54_RS14665	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
IHJ54_RS14670	COG1064	alcohol dehydrogenase
IHJ54_RS14675	COG3706	GGDEF domain
IHJ54_RS14715	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
IHJ54_RS14735	COG3423	Transcriptional regulator
IHJ54_RS14740	COG3657	addiction module killer protein
IHJ54_RS14770	COG0519	Catalyzes the synthesis of GMP from XMP
IHJ54_RS14770	COG0518	GMP synthase (glutamine-hydrolyzing) activity
IHJ54_RS14775	COG0517	IMP dehydrogenase activity
IHJ54_RS14775	COG0516	GMP reductase activity
IHJ54_RS14780	COG1570	exodeoxyribonuclease VII activity
IHJ54_RS14795	COG1645	bacterial-type flagellum-dependent swarming motility
IHJ54_RS14810	COG1160	GTP binding
IHJ54_RS14815	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IHJ54_RS14820	COG2976	Protein conserved in bacteria
IHJ54_RS14825	COG0124	histidyl-tRNA synthetase
IHJ54_RS14830	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
IHJ54_RS14835	COG1426	Protein conserved in bacteria
IHJ54_RS14845	COG0820	rRNA (adenine-C2-)-methyltransferase activity
IHJ54_RS14850	COG0105	UTP biosynthetic process
IHJ54_RS14860	COG1486	melibiose metabolic process
IHJ54_RS14865	COG2897	thiosulfate sulfurtransferase activity
IHJ54_RS14870	COG1737	Transcriptional regulator
IHJ54_RS14880	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
IHJ54_RS14885	COG2975	iron-sulfur cluster assembly
IHJ54_RS14890	COG0633	Ferredoxin
IHJ54_RS14895	COG0443	Heat shock 70 kDa protein
IHJ54_RS14900	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
IHJ54_RS14905	COG0316	Belongs to the HesB IscA family
IHJ54_RS14910	COG0822	iron-sulfur transferase activity
IHJ54_RS14915	COG1104	cysteine desulfurase activity
IHJ54_RS14920	COG1959	2 iron, 2 sulfur cluster binding
IHJ54_RS14925	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
IHJ54_RS14930	COG0483	inositol monophosphate 1-phosphatase activity
IHJ54_RS14940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IHJ54_RS14945	COG1120	ATPase activity
IHJ54_RS14965	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
IHJ54_RS14970	COG3683	transport system, periplasmic component
IHJ54_RS14975	COG2814	Major facilitator Superfamily
IHJ54_RS14980	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IHJ54_RS14985	COG1017	nitric oxide dioxygenase activity
IHJ54_RS14985	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
IHJ54_RS14995	COG4677	pectinesterase activity
IHJ54_RS15000	COG0347	Belongs to the P(II) protein family
IHJ54_RS15005	COG2204	response regulator
IHJ54_RS15010	COG3170	Tfp pilus assembly protein FimV
IHJ54_RS15015	COG2205	protein histidine kinase activity
IHJ54_RS15020	COG0047	phosphoribosylformylglycinamidine synthase activity
IHJ54_RS15020	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IHJ54_RS15025	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
IHJ54_RS15035	COG0560	Phosphoserine phosphatase
IHJ54_RS15040	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
IHJ54_RS15050	COG2199	diguanylate cyclase activity
IHJ54_RS15050	COG2200	EAL domain
IHJ54_RS15050	COG3287	FIST C domain
IHJ54_RS15070	COG2274	protein secretion by the type I secretion system
IHJ54_RS15075	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IHJ54_RS15085	COG2200	EAL domain
IHJ54_RS15090	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
IHJ54_RS15095	COG0736	holo-[acyl-carrier-protein] synthase activity
IHJ54_RS15100	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
IHJ54_RS15105	COG1381	Involved in DNA repair and RecF pathway recombination
IHJ54_RS15110	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
IHJ54_RS15115	COG0571	ribonuclease III activity
IHJ54_RS15125	COG0481	GTPase activity
IHJ54_RS15135	COG3086	response to oxidative stress
IHJ54_RS15140	COG3026	antisigma factor binding
IHJ54_RS15155	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
IHJ54_RS15160	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
IHJ54_RS15165	COG0513	Belongs to the DEAD box helicase family
IHJ54_RS15170	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
IHJ54_RS15175	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
IHJ54_RS15190	COG2819	hydrolase of the alpha beta superfamily
IHJ54_RS15195	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IHJ54_RS15220	COG1902	pentaerythritol trinitrate reductase activity
IHJ54_RS15225	COG0667	Aldo Keto reductase
IHJ54_RS15240	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
IHJ54_RS15245	COG4208	sulfate ABC transporter
IHJ54_RS15255	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
IHJ54_RS15260	COG3835	regulator
IHJ54_RS15265	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
IHJ54_RS15270	COG0232	Belongs to the dGTPase family. Type 2 subfamily
IHJ54_RS15275	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IHJ54_RS15280	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IHJ54_RS15290	COG0316	Belongs to the HesB IscA family
IHJ54_RS15300	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
IHJ54_RS15305	COG0625	glutathione transferase activity
IHJ54_RS15310	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
IHJ54_RS15320	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IHJ54_RS15325	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IHJ54_RS15330	COG1120	ATPase activity
IHJ54_RS15335	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
IHJ54_RS15340	COG1643	Atp-dependent helicase
IHJ54_RS15345	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
IHJ54_RS15350	COG1489	DNA binding
IHJ54_RS15360	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IHJ54_RS15370	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
IHJ54_RS15375	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
IHJ54_RS15380	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
IHJ54_RS15385	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
IHJ54_RS15390	COG0842	Transport permease protein
IHJ54_RS15395	COG1131	(ABC) transporter
IHJ54_RS15400	COG0288	reversible hydration of carbon dioxide
IHJ54_RS15415	COG3842	ATPase activity
IHJ54_RS15430	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
IHJ54_RS15435	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
IHJ54_RS15440	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
IHJ54_RS15445	COG1780	Probably involved in ribonucleotide reductase function
IHJ54_RS15455	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IHJ54_RS15470	COG0328	RNA-DNA hybrid ribonuclease activity
IHJ54_RS15475	COG2226	methyltransferase
IHJ54_RS15480	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IHJ54_RS15485	COG0741	lytic transglycosylase activity
IHJ54_RS15485	COG1388	LysM domain
IHJ54_RS15490	COG3021	interspecies interaction between organisms
IHJ54_RS15520	COG0542	response to heat
IHJ54_RS15530	COG0564	pseudouridine synthase activity
IHJ54_RS15535	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
IHJ54_RS15540	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
IHJ54_RS15545	COG0077	Prephenate dehydratase
IHJ54_RS15545	COG1605	Chorismate mutase
IHJ54_RS15550	COG1605	Chorismate mutase
IHJ54_RS15550	COG0287	Prephenate dehydrogenase
IHJ54_RS15555	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
IHJ54_RS15560	COG3279	Response regulator of the LytR AlgR family
IHJ54_RS15570	COG2264	protein methyltransferase activity
IHJ54_RS15580	COG0335	large ribosomal subunit rRNA binding
IHJ54_RS15585	COG0336	Belongs to the RNA methyltransferase TrmD family
IHJ54_RS15590	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
IHJ54_RS15595	COG0228	four-way junction DNA binding
IHJ54_RS15600	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IHJ54_RS15605	COG4137	Cytochrome C assembly protein
IHJ54_RS15610	COG1854	S-ribosylhomocysteine lyase activity
IHJ54_RS15615	COG2918	glutathione biosynthetic process
IHJ54_RS15620	COG1238	metal cluster binding
IHJ54_RS15625	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IHJ54_RS15650	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
IHJ54_RS15655	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
IHJ54_RS15660	COG2137	regulation of response to DNA damage stimulus
IHJ54_RS15665	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
IHJ54_RS15670	COG1546	Belongs to the CinA family
IHJ54_RS15695	COG2814	Major facilitator Superfamily
IHJ54_RS15700	COG0583	DNA-binding transcription factor activity
IHJ54_RS15705	COG2999	glutathione oxidoreductase activity
IHJ54_RS15725	COG3209	COG3209 Rhs family protein
IHJ54_RS15735	COG3209	COG3209 Rhs family protein
IHJ54_RS15765	COG3501	Rhs element vgr protein
IHJ54_RS15800	COG3829	transcription factor binding
IHJ54_RS15890	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
IHJ54_RS15895	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
IHJ54_RS15920	COG1073	alpha beta
IHJ54_RS15925	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
IHJ54_RS15930	COG2195	Cleaves the N-terminal amino acid of tripeptides
IHJ54_RS15935	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
IHJ54_RS15945	COG2226	methyltransferase
IHJ54_RS15950	COG3034	peptidoglycan biosynthetic process
IHJ54_RS15955	COG0121	glutamine amidotransferase
IHJ54_RS15960	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
IHJ54_RS15965	COG1960	acyl-CoA dehydrogenase activity
IHJ54_RS15975	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
IHJ54_RS15980	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
IHJ54_RS15990	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
IHJ54_RS15995	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
IHJ54_RS16000	COG0235	Class ii aldolase
IHJ54_RS16005	COG0436	Aminotransferase
IHJ54_RS16020	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
IHJ54_RS16030	COG0765	amino acid transport
IHJ54_RS16075	COG4175	Glycine betaine
IHJ54_RS16080	COG4176	ABC-type proline glycine betaine transport system permease component
IHJ54_RS16085	COG2113	Glycine betaine
IHJ54_RS16090	COG0596	Alpha beta hydrolase
IHJ54_RS16105	COG2814	Major facilitator Superfamily
IHJ54_RS16110	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
IHJ54_RS16120	COG1846	Transcriptional regulator
IHJ54_RS16125	COG1566	PFAM secretion protein HlyD family protein
IHJ54_RS16130	COG2814	Major facilitator Superfamily
IHJ54_RS16135	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
IHJ54_RS16145	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IHJ54_RS16150	COG3118	belongs to the thioredoxin family
IHJ54_RS16155	COG3148	PFAM DTW domain containing protein
IHJ54_RS16160	COG1042	CoA-binding domain protein
IHJ54_RS16160	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
IHJ54_RS16160	COG0045	succinate-CoA ligase (ADP-forming) activity
IHJ54_RS16165	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IHJ54_RS16170	COG0477	Major facilitator Superfamily
IHJ54_RS16210	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
IHJ54_RS16215	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IHJ54_RS16220	COG2011	ABC-type metal ion transport system permease component
IHJ54_RS16225	COG1464	Belongs to the NlpA lipoprotein family
IHJ54_RS16235	COG1720	tRNA m6t6A37 methyltransferase activity
IHJ54_RS16240	COG0442	prolyl-tRNA aminoacylation
IHJ54_RS16250	COG4942	peptidase
IHJ54_RS16250	COG1388	LysM domain
IHJ54_RS16255	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
IHJ54_RS16260	COG0585	pseudouridine synthase activity
IHJ54_RS16265	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
IHJ54_RS16270	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
IHJ54_RS16275	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
IHJ54_RS16285	COG0765	amino acid transport
IHJ54_RS16290	COG1126	abc transporter atp-binding protein
IHJ54_RS16300	COG0529	Catalyzes the synthesis of activated sulfate
IHJ54_RS16305	COG2895	sulfate adenylyltransferase (ATP) activity
IHJ54_RS16310	COG0175	sulfate reduction
IHJ54_RS16315	COG1648	precorrin-2 dehydrogenase activity
IHJ54_RS16315	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
IHJ54_RS16320	COG0584	glycerophosphoryl diester phosphodiesterase
IHJ54_RS16325	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS16340	COG0444	Belongs to the ABC transporter superfamily
IHJ54_RS16350	COG0175	sulfate reduction
IHJ54_RS16355	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IHJ54_RS16360	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
IHJ54_RS16370	COG2200	EAL domain
IHJ54_RS16390	COG0720	synthase
IHJ54_RS16395	COG0602	queuosine metabolic process
IHJ54_RS16400	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
IHJ54_RS16405	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS16410	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
IHJ54_RS16420	COG0583	DNA-binding transcription factor activity
IHJ54_RS16435	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
IHJ54_RS16445	COG0148	phosphopyruvate hydratase activity
IHJ54_RS16450	COG0504	CTP synthase activity
IHJ54_RS16455	COG3956	TIGRFAM MazG family protein
IHJ54_RS16460	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IHJ54_RS16465	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IHJ54_RS16475	COG1929	Belongs to the glycerate kinase type-1 family
IHJ54_RS16480	COG2084	Dehydrogenase
IHJ54_RS16490	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS16495	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS16500	COG2271	Major facilitator Superfamily
IHJ54_RS16505	COG2721	sulfolactate sulfo-lyase activity
IHJ54_RS16510	COG0840	transmembrane signaling receptor activity
IHJ54_RS16525	COG3530	Putative quorum-sensing-regulated virulence factor
IHJ54_RS16530	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
IHJ54_RS16535	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
IHJ54_RS16535	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
IHJ54_RS16540	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
IHJ54_RS16545	COG3025	triphosphatase activity
IHJ54_RS16550	COG4991	sh3 domain protein
IHJ54_RS16555	COG0617	tRNA 3'-terminal CCA addition
IHJ54_RS16560	COG1968	undecaprenyl-diphosphatase activity
IHJ54_RS16565	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
IHJ54_RS16570	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
IHJ54_RS16575	COG0840	transmembrane signaling receptor activity
IHJ54_RS16580	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
IHJ54_RS16585	COG2105	PFAM AIG2 family protein
IHJ54_RS16590	COG2911	Protein conserved in bacteria
IHJ54_RS16595	COG0729	surface antigen
IHJ54_RS16600	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IHJ54_RS16605	COG1253	flavin adenine dinucleotide binding
IHJ54_RS16615	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
IHJ54_RS16620	COG1218	3'(2'),5'-bisphosphate nucleotidase
IHJ54_RS16625	COG0737	Belongs to the 5'-nucleotidase family
IHJ54_RS16630	COG1733	regulation of RNA biosynthetic process
IHJ54_RS16645	COG3961	Belongs to the TPP enzyme family
IHJ54_RS16650	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
IHJ54_RS16655	COG0545	Peptidyl-prolyl cis-trans isomerase
IHJ54_RS16660	COG3061	Opacity-associated protein A
IHJ54_RS16670	COG0359	binds to the 23S rRNA
IHJ54_RS16675	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
IHJ54_RS16680	COG2965	DNA replication, synthesis of RNA primer
IHJ54_RS16685	COG0360	Binds together with S18 to 16S ribosomal RNA
IHJ54_RS16690	COG1073	alpha beta
IHJ54_RS16695	COG0840	transmembrane signaling receptor activity
IHJ54_RS16700	COG1690	Belongs to the RtcB family
IHJ54_RS16705	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
IHJ54_RS16720	COG3766	membrane
IHJ54_RS16725	COG0840	transmembrane signaling receptor activity
IHJ54_RS16730	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IHJ54_RS16735	COG0557	exoribonuclease II activity
IHJ54_RS16740	COG1959	2 iron, 2 sulfur cluster binding
IHJ54_RS16745	COG0840	transmembrane signaling receptor activity
IHJ54_RS16755	COG2805	Type II/IV secretion system protein
IHJ54_RS16760	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
IHJ54_RS16765	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IHJ54_RS16770	COG0762	integral membrane protein
IHJ54_RS16775	COG1872	DUF167
IHJ54_RS16780	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
IHJ54_RS16785	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IHJ54_RS16790	COG0840	transmembrane signaling receptor activity
IHJ54_RS16800	COG2153	protein acetylation
IHJ54_RS16805	COG0477	Major facilitator Superfamily
IHJ54_RS16810	COG0318	PFAM AMP-dependent synthetase and ligase
IHJ54_RS16810	COG0204	Acyl-transferase
IHJ54_RS16820	COG2186	Transcriptional regulator
IHJ54_RS16825	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IHJ54_RS16830	COG2723	6-phospho-beta-galactosidase activity
IHJ54_RS16835	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
IHJ54_RS16840	COG1447	Phosphotransferase system cellobiose-specific component IIA
IHJ54_RS16845	COG1609	Transcriptional regulator
IHJ54_RS16850	COG1396	sequence-specific DNA binding
IHJ54_RS16865	COG0583	DNA-binding transcription factor activity
IHJ54_RS16870	COG0583	DNA-binding transcription factor activity
IHJ54_RS16895	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IHJ54_RS16905	COG2124	cytochrome p450
IHJ54_RS16920	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
IHJ54_RS16940	COG1522	sequence-specific DNA binding
IHJ54_RS16950	COG1448	Aminotransferase
IHJ54_RS16955	COG1451	nucleotide metabolic process
IHJ54_RS16985	COG0432	Pfam Uncharacterised protein family UPF0047
IHJ54_RS16995	COG0629	single-stranded DNA binding
IHJ54_RS17015	COG0395	ABC-type sugar transport system, permease component
IHJ54_RS17020	COG1175	transmembrane transport
IHJ54_RS17025	COG3842	ATPase activity
IHJ54_RS17030	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
IHJ54_RS17050	COG2971	BadF BadG BcrA BcrD
IHJ54_RS17060	COG1121	(ABC) transporter
IHJ54_RS17065	COG1108	ABC-type Mn2 Zn2 transport systems permease components
IHJ54_RS17070	COG0803	Belongs to the bacterial solute-binding protein 9 family
IHJ54_RS17080	COG1349	DNA-binding transcription factor activity
IHJ54_RS17085	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
IHJ54_RS17090	COG3395	kinase activity
IHJ54_RS17095	COG1454	alcohol dehydrogenase
IHJ54_RS17100	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IHJ54_RS17115	COG2731	YhcH YjgK YiaL family protein
IHJ54_RS17120	COG1028	Short-chain dehydrogenase reductase Sdr
IHJ54_RS17125	COG1609	Transcriptional regulator
IHJ54_RS17130	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
IHJ54_RS17145	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IHJ54_RS17150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IHJ54_RS17155	COG0765	amino acid transport
IHJ54_RS17165	COG0765	amino acid transport
IHJ54_RS17170	COG3112	Uncharacterised protein family (UPF0231)
IHJ54_RS17185	COG0640	Transcriptional regulator
IHJ54_RS17195	COG2207	Transcriptional regulator
IHJ54_RS17200	COG2079	MmgE PrpD family protein
IHJ54_RS17210	COG1073	alpha beta
IHJ54_RS17220	COG2814	Major facilitator Superfamily
IHJ54_RS17230	COG0583	DNA-binding transcription factor activity
IHJ54_RS17235	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IHJ54_RS17240	COG0508	dehydrogenase complex catalyzes the overall conversion of
IHJ54_RS17245	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
IHJ54_RS17255	COG1113	amino acid transport
IHJ54_RS17265	COG3940	Belongs to the glycosyl hydrolase 43 family
IHJ54_RS17270	COG3725	Membrane protein required for beta-lactamase induction
IHJ54_RS17275	COG3023	N-Acetylmuramoyl-L-alanine amidase
IHJ54_RS17280	COG3248	Nucleoside-binding outer membrane protein
IHJ54_RS17285	COG0157	Belongs to the NadC ModD family
IHJ54_RS17290	COG4969	Belongs to the N-Me-Phe pilin family
IHJ54_RS17295	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
IHJ54_RS17300	COG1459	type II secretion system
IHJ54_RS17305	COG0516	GMP reductase activity
IHJ54_RS17310	COG0237	dephospho-CoA kinase activity
IHJ54_RS17315	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
IHJ54_RS17320	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
IHJ54_RS17325	COG0494	nUDIX hydrolase
IHJ54_RS17330	COG0653	protein targeting
IHJ54_RS17345	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
IHJ54_RS17350	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
IHJ54_RS17355	COG0849	cell division
IHJ54_RS17360	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
IHJ54_RS17365	COG1181	Belongs to the D-alanine--D-alanine ligase family
IHJ54_RS17370	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
IHJ54_RS17375	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
IHJ54_RS17380	COG0772	Belongs to the SEDS family
IHJ54_RS17385	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
IHJ54_RS17390	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IHJ54_RS17395	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
IHJ54_RS17400	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
IHJ54_RS17405	COG0768	penicillin binding
IHJ54_RS17410	COG3116	cell division
IHJ54_RS17415	COG0275	rRNA processing
IHJ54_RS17420	COG2001	Belongs to the MraZ family
IHJ54_RS17440	COG0028	Belongs to the TPP enzyme family
IHJ54_RS17445	COG1022	Amp-dependent synthetase and ligase
IHJ54_RS17450	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
IHJ54_RS17455	COG0473	3-isopropylmalate dehydrogenase activity
IHJ54_RS17460	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
IHJ54_RS17465	COG0066	3-isopropylmalate dehydratase activity
IHJ54_RS17485	COG0840	transmembrane signaling receptor activity
IHJ54_RS17495	COG3033	Beta-eliminating lyase
IHJ54_RS17505	COG4533	DNA binding
IHJ54_RS17510	COG4143	(ABC) transporter
IHJ54_RS17515	COG1178	ABC-type Fe3 transport system permease component
IHJ54_RS17520	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
IHJ54_RS17525	COG3507	Belongs to the glycosyl hydrolase 43 family
IHJ54_RS17530	COG0028	Belongs to the TPP enzyme family
IHJ54_RS17535	COG0440	acetolactate synthase activity
IHJ54_RS17540	COG0586	Pfam SNARE associated Golgi protein
IHJ54_RS17545	COG3706	GGDEF domain
IHJ54_RS17550	COG0417	DNA replication proofreading
IHJ54_RS17555	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
IHJ54_RS17560	COG0564	pseudouridine synthase activity
IHJ54_RS17565	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
IHJ54_RS17570	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
IHJ54_RS17575	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IHJ54_RS17580	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
IHJ54_RS17585	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
IHJ54_RS17590	COG2967	ApaG domain
IHJ54_RS17595	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
IHJ54_RS17615	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
IHJ54_RS17620	COG3610	response to peptide
IHJ54_RS17625	COG2966	Psort location CytoplasmicMembrane, score
IHJ54_RS17635	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
IHJ54_RS17640	COG0505	Belongs to the CarA family
IHJ54_RS17645	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
IHJ54_RS17650	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
IHJ54_RS17655	COG1047	Peptidyl-prolyl cis-trans
IHJ54_RS17665	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
IHJ54_RS17670	COG0196	riboflavin kinase activity
IHJ54_RS17675	COG0268	Binds directly to 16S ribosomal RNA
IHJ54_RS17680	COG0583	DNA-binding transcription factor activity
IHJ54_RS17685	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
IHJ54_RS17690	COG0484	heat shock protein binding
IHJ54_RS17695	COG0443	Heat shock 70 kDa protein
IHJ54_RS17700	COG1584	GPR1 FUN34 yaaH family protein
IHJ54_RS17710	COG0521	Mo-molybdopterin cofactor biosynthetic process
IHJ54_RS17720	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
IHJ54_RS17725	COG3022	response to hydroperoxide
IHJ54_RS17735	COG0083	homoserine kinase activity
IHJ54_RS17750	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
IHJ54_RS17755	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS17760	COG3045	CreA protein
IHJ54_RS17765	COG3708	Transcriptional regulator
IHJ54_RS17765	COG2207	Transcriptional regulator
IHJ54_RS17775	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
IHJ54_RS17780	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
IHJ54_RS17795	COG0488	(ABC) transporter
IHJ54_RS17800	COG0840	transmembrane signaling receptor activity
IHJ54_RS17805	COG0583	DNA-binding transcription factor activity
IHJ54_RS17810	COG0604	alcohol dehydrogenase
IHJ54_RS17815	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IHJ54_RS17820	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
IHJ54_RS17825	COG0583	DNA-binding transcription factor activity
IHJ54_RS17835	COG1279	arginine transmembrane transporter activity
IHJ54_RS17840	COG0668	transmembrane transport
IHJ54_RS17845	COG0191	fructose-bisphosphate aldolase activity
IHJ54_RS17850	COG0126	phosphoglycerate kinase activity
IHJ54_RS17855	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IHJ54_RS17860	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IHJ54_RS17865	COG0501	Belongs to the peptidase M48B family
IHJ54_RS17875	COG1166	arginine decarboxylase activity
IHJ54_RS17880	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
IHJ54_RS17885	COG3091	SprT-like family
IHJ54_RS17890	COG2356	endonuclease I
IHJ54_RS17895	COG1385	rRNA (uridine-N3-)-methyltransferase activity
IHJ54_RS17900	COG0189	ligase activity
IHJ54_RS17905	COG1678	Uncharacterized ACR, COG1678
IHJ54_RS17910	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
IHJ54_RS17915	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
IHJ54_RS17920	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
IHJ54_RS17925	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
IHJ54_RS17930	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
IHJ54_RS17935	COG0330	HflC and HflK could
IHJ54_RS17940	COG0330	HflC and HflK could
IHJ54_RS17945	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IHJ54_RS17950	COG1923	regulation of RNA biosynthetic process
IHJ54_RS17955	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
IHJ54_RS17960	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
IHJ54_RS17970	COG0802	atpase or kinase
IHJ54_RS17975	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IHJ54_RS17975	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
IHJ54_RS17980	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
IHJ54_RS17995	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
IHJ54_RS18015	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
IHJ54_RS18030	COG1704	LemA family
IHJ54_RS18035	COG1064	alcohol dehydrogenase
IHJ54_RS18055	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
IHJ54_RS18060	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
IHJ54_RS18080	COG1011	Hydrolase
IHJ54_RS18105	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
IHJ54_RS18110	COG1162	GTPase activity
IHJ54_RS18115	COG0688	phosphatidylethanolamine metabolic process
IHJ54_RS18120	COG1511	domain protein
IHJ54_RS18120	COG3264	Mechanosensitive ion channel
IHJ54_RS18125	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
IHJ54_RS18130	COG1053	succinate dehydrogenase
IHJ54_RS18135	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
IHJ54_RS18140	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
IHJ54_RS18145	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
IHJ54_RS18150	COG3040	lipid binding
IHJ54_RS18165	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IHJ54_RS18170	COG1509	lysine 2,3-aminomutase activity
IHJ54_RS18180	COG0166	Belongs to the GPI family
IHJ54_RS18185	COG0527	aspartate kinase activity
IHJ54_RS18195	COG0471	metal ion transport
IHJ54_RS18205	COG2207	Transcriptional regulator
IHJ54_RS18210	COG0646	methionine synthase
IHJ54_RS18210	COG1410	methionine synthase
IHJ54_RS18220	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
IHJ54_RS18230	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
IHJ54_RS18235	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
IHJ54_RS18260	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
IHJ54_RS18270	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
IHJ54_RS18275	COG0009	L-threonylcarbamoyladenylate synthase
IHJ54_RS18280	COG0551	DNA topoisomerase type I activity
IHJ54_RS18285	COG2922	Belongs to the Smg family
IHJ54_RS18290	COG0758	DNA mediated transformation
IHJ54_RS18295	COG0242	peptide deformylase activity
IHJ54_RS18300	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
IHJ54_RS18305	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IHJ54_RS18305	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IHJ54_RS18310	COG0569	domain protein
IHJ54_RS18315	COG1970	mechanosensitive ion channel activity
IHJ54_RS18320	COG3036	rescue of stalled ribosome
IHJ54_RS18325	COG0203	ribosomal protein L17
IHJ54_RS18330	COG0202	RNA polymerase activity
IHJ54_RS18335	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
IHJ54_RS18345	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
IHJ54_RS18350	COG0257	Belongs to the bacterial ribosomal protein bL36 family
IHJ54_RS18355	COG0201	protein transport
IHJ54_RS18360	COG0200	Binds to the 23S rRNA
IHJ54_RS18365	COG1841	ribosomal large subunit assembly
IHJ54_RS18370	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
IHJ54_RS18375	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
IHJ54_RS18380	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
IHJ54_RS18385	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
IHJ54_RS18390	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
IHJ54_RS18395	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
IHJ54_RS18400	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
IHJ54_RS18410	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
IHJ54_RS18415	COG0255	Belongs to the universal ribosomal protein uL29 family
IHJ54_RS18420	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
IHJ54_RS18425	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
IHJ54_RS18430	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
IHJ54_RS18435	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
IHJ54_RS18440	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
IHJ54_RS18450	COG0088	Forms part of the polypeptide exit tunnel
IHJ54_RS18455	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
IHJ54_RS18460	COG0051	transcription antitermination factor activity, RNA binding
IHJ54_RS18465	COG2193	ferroxidase activity
IHJ54_RS18480	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
IHJ54_RS18485	COG0049	tRNA binding
IHJ54_RS18490	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
IHJ54_RS18495	COG2168	tRNA wobble position uridine thiolation
IHJ54_RS18500	COG2923	Belongs to the DsrF TusC family
IHJ54_RS18505	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
IHJ54_RS18510	COG2964	Protein conserved in bacteria
IHJ54_RS18520	COG0745	RESPONSE REGULATOR receiver
IHJ54_RS18525	COG0642	Histidine kinase
IHJ54_RS18530	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IHJ54_RS18545	COG0545	Peptidyl-prolyl cis-trans isomerase
IHJ54_RS18550	COG2900	Belongs to the SlyX family
IHJ54_RS18555	COG1047	Peptidyl-prolyl cis-trans
IHJ54_RS18560	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
IHJ54_RS18565	COG0475	glutathione-regulated potassium exporter activity
IHJ54_RS18565	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
IHJ54_RS18570	COG2249	NAD(P)H dehydrogenase (quinone) activity
IHJ54_RS18575	COG0488	(ABC) transporter
IHJ54_RS18580	COG3853	Toxic anion resistance protein (TelA)
IHJ54_RS18595	COG0429	hydrolase of the alpha beta-hydrolase fold
IHJ54_RS18600	COG3089	Belongs to the UPF0270 family
IHJ54_RS18605	COG3954	Phosphoribulokinase
IHJ54_RS18610	COG1765	OsmC-like protein
IHJ54_RS18615	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
IHJ54_RS18635	COG3866	Pectate lyase
IHJ54_RS18655	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IHJ54_RS18660	COG4608	Belongs to the ABC transporter superfamily
IHJ54_RS18665	COG0444	Belongs to the ABC transporter superfamily
IHJ54_RS18670	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS18675	COG0601	transmembrane transport
IHJ54_RS18680	COG0747	negative chemotaxis
IHJ54_RS18685	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS18690	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
IHJ54_RS18700	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
IHJ54_RS18700	COG1648	precorrin-2 dehydrogenase activity
IHJ54_RS18725	COG1473	amidohydrolase
IHJ54_RS18735	COG0546	phosphoglycolate phosphatase activity
IHJ54_RS18740	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
IHJ54_RS18755	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
IHJ54_RS18760	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
IHJ54_RS18765	COG4796	Type ii and iii secretion system protein
IHJ54_RS18790	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
IHJ54_RS18800	COG0494	nUDIX hydrolase
IHJ54_RS18810	COG1011	Hydrolase
IHJ54_RS18815	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
IHJ54_RS18820	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
IHJ54_RS18825	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
IHJ54_RS18850	COG2814	Major facilitator Superfamily
IHJ54_RS18855	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
IHJ54_RS18860	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
IHJ54_RS18865	COG0019	diaminopimelate decarboxylase activity
IHJ54_RS18870	COG4774	siderophore transport
IHJ54_RS18875	COG4264	IucA IucC family
IHJ54_RS18885	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
IHJ54_RS18890	COG3550	peptidyl-serine autophosphorylation
IHJ54_RS18905	COG0840	transmembrane signaling receptor activity
IHJ54_RS18915	COG2183	response to ionizing radiation
IHJ54_RS18920	COG1414	Transcriptional regulator
IHJ54_RS18950	COG1785	Belongs to the alkaline phosphatase family
IHJ54_RS18965	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
IHJ54_RS18970	COG2267	carboxylic ester hydrolase activity
IHJ54_RS18975	COG1040	competence protein
IHJ54_RS18980	COG0316	Belongs to the HesB IscA family
IHJ54_RS18980	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
IHJ54_RS18985	COG1640	4-alpha-glucanotransferase
IHJ54_RS18990	COG0058	SHG alpha-glucan phosphorylase activity
IHJ54_RS18995	COG1349	DNA-binding transcription factor activity
IHJ54_RS19000	COG0705	Rhomboid family
IHJ54_RS19005	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IHJ54_RS19010	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
IHJ54_RS19035	COG0058	SHG alpha-glucan phosphorylase activity
IHJ54_RS19040	COG0297	glycogen (starch) synthase activity
IHJ54_RS19045	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
IHJ54_RS19050	COG1523	belongs to the glycosyl hydrolase 13 family
IHJ54_RS19055	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
IHJ54_RS19060	COG3275	phosphorelay sensor kinase activity
IHJ54_RS19070	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IHJ54_RS19075	COG2095	MarC family integral membrane protein
IHJ54_RS19080	COG2610	gluconate transmembrane transporter activity
IHJ54_RS19085	COG3265	gluconokinase activity
IHJ54_RS19090	COG1609	Transcriptional regulator
IHJ54_RS19095	COG1741	Belongs to the pirin family
IHJ54_RS19105	COG0247	lactate metabolic process
IHJ54_RS19110	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
IHJ54_RS19115	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
IHJ54_RS19120	COG2271	Major facilitator Superfamily
IHJ54_RS19125	COG0584	glycerophosphoryl diester phosphodiesterase
IHJ54_RS19130	COG0561	phosphatase activity
IHJ54_RS19135	COG2267	carboxylic ester hydrolase activity
IHJ54_RS19140	COG1280	lysine exporter protein (LysE YggA)
IHJ54_RS19145	COG1280	lysine exporter protein (LysE YggA)
IHJ54_RS19150	COG0514	ATP-dependent DNA helicase (RecQ)
IHJ54_RS19160	COG2050	protein possibly involved in aromatic compounds catabolism
IHJ54_RS19170	COG3180	Ammonia monooxygenase
IHJ54_RS19175	COG0598	Magnesium transport protein CorA
IHJ54_RS19180	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
IHJ54_RS19185	COG0210	DNA helicase
IHJ54_RS19190	COG1011	Hydrolase
IHJ54_RS19205	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
IHJ54_RS19215	COG1965	Belongs to the frataxin family
IHJ54_RS19220	COG2814	Major facilitator Superfamily
IHJ54_RS19230	COG0181	hydroxymethylbilane synthase activity
IHJ54_RS19235	COG1587	Uroporphyrinogen-III synthase
IHJ54_RS19240	COG2959	enzyme of heme biosynthesis
IHJ54_RS19245	COG3071	HemY protein
IHJ54_RS19250	COG1473	amidohydrolase
IHJ54_RS19255	COG1126	abc transporter atp-binding protein
IHJ54_RS19260	COG0765	amino acid transport
IHJ54_RS19265	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IHJ54_RS19270	COG0456	acetyltransferase
IHJ54_RS19275	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IHJ54_RS19310	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
IHJ54_RS19320	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
IHJ54_RS19325	COG2244	polysaccharide biosynthetic process
IHJ54_RS19330	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
IHJ54_RS19335	COG0456	acetyltransferase
IHJ54_RS19340	COG1088	dTDP-glucose 4,6-dehydratase activity
IHJ54_RS19345	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
IHJ54_RS19350	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
IHJ54_RS19355	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
IHJ54_RS19360	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IHJ54_RS19365	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
IHJ54_RS19370	COG3118	belongs to the thioredoxin family
IHJ54_RS19375	COG0513	Belongs to the DEAD box helicase family
IHJ54_RS19380	COG0248	Ppx GppA phosphatase
IHJ54_RS19385	COG0210	DNA helicase
IHJ54_RS19390	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
IHJ54_RS19395	COG0506	proline dehydrogenase activity
IHJ54_RS19395	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
IHJ54_RS19395	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
IHJ54_RS19405	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
IHJ54_RS19410	COG0583	DNA-binding transcription factor activity
IHJ54_RS19430	COG0129	dihydroxy-acid dehydratase activity
IHJ54_RS19440	COG3978	acetolactate synthase activity
IHJ54_RS19460	COG3085	chromosome segregation
IHJ54_RS19465	COG0583	DNA-binding transcription factor activity
IHJ54_RS19470	COG1172	Belongs to the binding-protein-dependent transport system permease family
IHJ54_RS19475	COG1172	Belongs to the binding-protein-dependent transport system permease family
IHJ54_RS19480	COG1129	ABC transporter
IHJ54_RS19485	COG1879	ABC-type sugar transport system periplasmic component
IHJ54_RS19535	COG1739	Uncharacterized protein family UPF0029
IHJ54_RS19540	COG0006	proline dipeptidase activity
IHJ54_RS19545	COG1250	3-hydroxyacyl-CoA dehydrogenase
IHJ54_RS19545	COG1024	Enoyl-CoA hydratase
IHJ54_RS19550	COG0183	Belongs to the thiolase family
IHJ54_RS19560	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
IHJ54_RS19565	COG0250	Participates in transcription elongation, termination and antitermination
IHJ54_RS19575	COG0084	hydrolase, TatD family'
IHJ54_RS19580	COG0805	protein transport
IHJ54_RS19585	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
IHJ54_RS19590	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
IHJ54_RS19595	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
IHJ54_RS19605	COG2226	methyltransferase
IHJ54_RS19610	COG1322	Protein conserved in bacteria
IHJ54_RS19615	COG0165	Argininosuccinate lyase
IHJ54_RS19620	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
IHJ54_RS19625	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
IHJ54_RS19630	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
IHJ54_RS19635	COG2188	Transcriptional regulator
IHJ54_RS19640	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS19645	COG2190	(PTS) system
IHJ54_RS19645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
IHJ54_RS19645	COG1263	PTS System
IHJ54_RS19650	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
IHJ54_RS19675	COG0412	Dienelactone hydrolase
IHJ54_RS19680	COG0840	transmembrane signaling receptor activity
IHJ54_RS19685	COG0840	transmembrane signaling receptor activity
IHJ54_RS19690	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
IHJ54_RS19695	COG0583	DNA-binding transcription factor activity
IHJ54_RS19715	COG3157	Type VI secretion system effector, Hcp
IHJ54_RS19725	COG1045	serine acetyltransferase
IHJ54_RS19730	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
IHJ54_RS19735	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
IHJ54_RS19740	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IHJ54_RS19745	COG4942	peptidase
IHJ54_RS19750	COG2861	carbohydrate metabolic process
IHJ54_RS19755	COG1063	alcohol dehydrogenase
IHJ54_RS19760	COG0156	8-amino-7-oxononanoate synthase activity
IHJ54_RS19765	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IHJ54_RS19775	COG0859	PFAM glycosyl transferase family 9
IHJ54_RS19780	COG0859	PFAM glycosyl transferase family 9
IHJ54_RS19795	COG1519	Transferase
IHJ54_RS19800	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
IHJ54_RS19805	COG0859	PFAM glycosyl transferase family 9
IHJ54_RS19810	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
IHJ54_RS19820	COG0227	Belongs to the bacterial ribosomal protein bL28 family
IHJ54_RS19825	COG2003	Belongs to the UPF0758 family
IHJ54_RS19830	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IHJ54_RS19835	COG0756	dUTP diphosphatase activity
IHJ54_RS19840	COG1309	transcriptional regulator
IHJ54_RS19845	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
IHJ54_RS19850	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
IHJ54_RS19855	COG4948	Mandelate Racemase Muconate Lactonizing
IHJ54_RS19860	COG4172	Belongs to the ABC transporter superfamily
IHJ54_RS19865	COG0747	negative chemotaxis
IHJ54_RS19870	COG0601	transmembrane transport
IHJ54_RS19875	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS19890	COG1446	asparaginase
IHJ54_RS19895	COG0583	DNA-binding transcription factor activity
IHJ54_RS19900	COG1561	YicC-like family, N-terminal region
IHJ54_RS19945	COG0628	permease
IHJ54_RS19950	COG1304	FMN binding
IHJ54_RS19955	COG1012	belongs to the aldehyde dehydrogenase family
IHJ54_RS19965	COG3239	Fatty acid desaturase
IHJ54_RS19995	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
IHJ54_RS20000	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IHJ54_RS20005	COG3136	membrane protein required for alginate biosynthesis
IHJ54_RS20030	COG4677	pectinesterase activity
IHJ54_RS20035	COG2771	luxR family
IHJ54_RS20045	COG0137	argininosuccinate synthase activity
IHJ54_RS20055	COG2207	Transcriptional regulator
IHJ54_RS20055	COG1609	Transcriptional regulator
IHJ54_RS20060	COG4214	carbohydrate transport
IHJ54_RS20065	COG1129	ABC transporter
IHJ54_RS20070	COG4213	ABC transporter substrate-binding protein
IHJ54_RS20075	COG2115	Belongs to the xylose isomerase family
IHJ54_RS20080	COG1070	Carbohydrate kinase
IHJ54_RS20085	COG3274	enterobacterial common antigen metabolic process
IHJ54_RS20090	COG1012	belongs to the aldehyde dehydrogenase family
IHJ54_RS20095	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
IHJ54_RS20100	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
IHJ54_RS20105	COG0840	transmembrane signaling receptor activity
IHJ54_RS20115	COG3722	fumarate hydratase activity
IHJ54_RS20120	COG0246	Mannitol dehydrogenase
IHJ54_RS20125	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
IHJ54_RS20125	COG2213	PTS system mannitol-specific
IHJ54_RS20135	COG0751	glycine-tRNA ligase activity
IHJ54_RS20140	COG0752	glycyl-tRNA synthetase alpha subunit
IHJ54_RS20145	COG0730	response to heat
IHJ54_RS20150	COG2818	Glycosylase
IHJ54_RS20155	COG0456	acetyltransferase
IHJ54_RS20165	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IHJ54_RS20180	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
IHJ54_RS20185	COG4172	Belongs to the ABC transporter superfamily
IHJ54_RS20190	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
IHJ54_RS20200	COG3479	Phenolic acid decarboxylase
IHJ54_RS20215	COG3550	peptidyl-serine autophosphorylation
IHJ54_RS20220	COG3550	peptidyl-serine autophosphorylation
IHJ54_RS20225	COG1280	lysine exporter protein (LysE YggA)
IHJ54_RS20230	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
IHJ54_RS20250	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
IHJ54_RS20255	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
IHJ54_RS20265	COG2214	Heat shock protein DnaJ domain protein
IHJ54_RS20270	COG0443	Heat shock 70 kDa protein
IHJ54_RS20285	COG3712	iron ion homeostasis
IHJ54_RS20290	COG1595	DNA-templated transcription, initiation
IHJ54_RS20295	COG1629	transport
IHJ54_RS20305	COG0742	ribosomal rna small subunit methyltransferase
IHJ54_RS20310	COG0737	Belongs to the 5'-nucleotidase family
IHJ54_RS20320	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
IHJ54_RS20325	COG0589	response to stress
IHJ54_RS20335	COG0306	phosphate transporter
IHJ54_RS20340	COG2081	HI0933 family
IHJ54_RS20345	COG2200	EAL domain
IHJ54_RS20360	COG2194	sulfuric ester hydrolase activity
IHJ54_RS20365	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
IHJ54_RS20370	COG0194	GDP metabolic process
IHJ54_RS20375	COG1758	RNA polymerase activity
IHJ54_RS20380	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IHJ54_RS20385	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IHJ54_RS20390	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IHJ54_RS20395	COG2233	PERMEase
IHJ54_RS20400	COG2982	Protein involved in outer membrane biogenesis
IHJ54_RS20405	COG0456	acetyltransferase
IHJ54_RS20410	COG1490	D-aminoacyl-tRNA deacylase activity
IHJ54_RS20415	COG1011	Hydrolase
IHJ54_RS20430	COG3852	Histidine kinase
IHJ54_RS20450	COG0635	Involved in the biosynthesis of porphyrin-containing compound
IHJ54_RS20460	COG3078	GTPase activator activity
IHJ54_RS20465	COG0218	Necessary for normal cell division and for the maintenance of normal septation
IHJ54_RS20470	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IHJ54_RS20470	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IHJ54_RS20480	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
IHJ54_RS20485	COG3084	Protein conserved in bacteria
IHJ54_RS20490	COG0746	molybdenum cofactor guanylyltransferase activity
IHJ54_RS20495	COG1763	Mo-molybdopterin cofactor biosynthetic process
IHJ54_RS20520	COG1609	Transcriptional regulator
IHJ54_RS20525	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IHJ54_RS20535	COG1172	Belongs to the binding-protein-dependent transport system permease family
IHJ54_RS20540	COG1129	ABC transporter
IHJ54_RS20545	COG1869	D-ribose catabolic process
IHJ54_RS20550	COG3111	PFAM Bacterial OB fold (BOF) protein
IHJ54_RS20560	COG0642	Histidine kinase
IHJ54_RS20565	COG3158	transport of potassium into the cell
IHJ54_RS20570	COG0714	Associated with various cellular activities
IHJ54_RS20575	COG2425	protein containing a von Willebrand factor type A (vWA) domain
IHJ54_RS20580	COG2502	aspartate--ammonia ligase
IHJ54_RS20585	COG1522	sequence-specific DNA binding
IHJ54_RS20590	COG0716	FMN binding
IHJ54_RS20595	COG0445	tRNA wobble uridine modification
IHJ54_RS20600	COG0357	Ribosomal RNA small subunit methyltransferase G
IHJ54_RS20605	COG3312	ion transport
IHJ54_RS20610	COG0356	it plays a direct role in the translocation of protons across the membrane
IHJ54_RS20620	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
IHJ54_RS20625	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IHJ54_RS20630	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
IHJ54_RS20635	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
IHJ54_RS20640	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
IHJ54_RS20645	COG0355	proton-transporting ATP synthase activity, rotational mechanism
IHJ54_RS20655	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
IHJ54_RS20660	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
IHJ54_RS20670	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
IHJ54_RS20675	COG0573	inorganic phosphate transmembrane transporter activity
IHJ54_RS20680	COG0581	inorganic phosphate transmembrane transporter activity
IHJ54_RS20685	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
IHJ54_RS20695	COG1396	sequence-specific DNA binding
IHJ54_RS20700	COG3135	benzoate transporter
IHJ54_RS20705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
IHJ54_RS20710	COG0765	amino acid transport
IHJ54_RS20715	COG0765	amino acid transport
IHJ54_RS20720	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
IHJ54_RS20725	COG2252	PERMEase
IHJ54_RS20730	COG2091	lysine biosynthetic process via aminoadipic acid
IHJ54_RS20735	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
IHJ54_RS20740	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
IHJ54_RS20740	COG0493	'glutamate synthase
IHJ54_RS20770	COG1733	regulation of RNA biosynthetic process
IHJ54_RS20775	COG0702	epimerase
IHJ54_RS20790	COG1396	sequence-specific DNA binding
IHJ54_RS20795	COG3550	peptidyl-serine autophosphorylation
IHJ54_RS20805	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
IHJ54_RS20810	COG0706	membrane insertase activity
IHJ54_RS20820	COG0594	ribonuclease P activity
IHJ54_RS20825	COG0230	Belongs to the bacterial ribosomal protein bL34 family