        recF NONE
        gyrB    6174 ..    6195 + -15.9  -5.60993   GTTATCGTTATCTGA           GCCAGCTCC CTGC GGAGCTGGC            TTTTTTTATGGCGAG 100 54
LQF52_RS00030    8002 ..    8033 +  -7.2  -3.87815   TGTCCGCGCTGGGAA      TAAAACACAGGCCG TTTC CGGCCTGTGTGGGA       TTTCTACGGGTGAAG  70 23
LQF52_RS00045 NONE
LQF52_RS00050 NONE
LQF52_RS00055 NONE
LQF52_RS00060   15010 ..   15029 + -10.7  -4.75174   AACGTTGGTCACAAG            GCCGTGC TTAACC GCACGGC             TTTTTACGTTGCATG  95 55
        yidA   15970 ..   15994 + -15.9  -3.94634   GAGAGATATAAAGCC          GAATAGCCATC AAC GATGGCTATTC          TTATTTCAAATAATA 100 44
LQF52_RS00075   18710 ..   18733 +   -14  -2.91264   CATTTATGATTCAAA          TAAGGGGTGA GTGT TCACCCCTTA           TCTATCCGTAACAAG  87 49
LQF52_RS00080   19676 ..   19695 +  -6.4  -3.38339   TTTTCACGCTGTAGA            GGTGTGGG TCTT TCTACACC             TTGATGTTCGGTAGT  59 59
LQF52_RS00085 NONE
LQF52_RS00090 NONE
LQF52_RS00095 NONE
LQF52_RS00100 NONE
LQF52_RS00105   25426 ..   25465 + -12.3   -5.3671   CGTAACACTGAATGT  AAAAACGGACTTTCCTC TTGATT GAGGAAAGTCCGTTTAA   TTTTTTGATTGTCTT 100 36
LQF52_RS00135 NONE
LQF52_RS00140 NONE
LQF52_RS00145   33292 ..   33312 + -15.5   -2.5076   GTCTTTATCCACGTC            GGTGTGGCA CTC TGCCACACC            ATATTAATCGTCCTT  93 41
LQF52_RS00155   35395 ..   35411 +  -2.1  -4.03888   CACTGTGCGAAATGC              GCTCGCG CGT CGATAGC              TTGTTCTTATCGCTG  54 165
        ibpA   36496 ..   36508 +  -4.7  -3.64822   AACATCACGTTATTT                GCACG AAT CGCGC                TTTACCTGAAACGGT  55 44
        ibpB   37125 ..   37150 + -16.9  -4.66537   TTGTTTGATGATTTC         CCGCGCTCGTA TCAT TACGGGCGCGG          TTTTGTGTTGCCCGC 100 54
LQF52_RS00175   39137 ..   39153 +  -5.8  -4.88895   AAAACTACTATTTTC              TCGCCG AATAA TGGCGA              TTTATTTCTTTATTT  78 58
LQF52_RS00180 NONE
LQF52_RS00185 NONE
        dcuR   43664 ..   43681 + -12.7  -3.46602   GGTAAACAGAAACGA             GGCGGGA GCGA TCCCGCC              TTGTGCTATACACCA  93 68
LQF52_RS00195   44757 ..   44778 +   -13  -4.45544   CTGAATAAATAAAAA           CGCCACGG CAATCA CCGTGGCG            TTTTCGTTAGTGGGG 100 134
LQF52_RS00205   49255 ..   49298 + -11.6    -4.183   CACGGACATTAAAAA CCCCGACCTTGCGGTTTCTC GTTA GAGGAGCCGTGGAGGCGGGG TTTCTTGCCCGTTAA  93 58
        dppB NONE
        dppC NONE
        dppD NONE
LQF52_RS00225   53398 ..   53440 + -13.5  -2.76404   CAGTCGCCTAGTTTG CCTTCAACTCACCTACGCT GTTAA GGCGTAGGTGAGTGGGAAG TGGGTTTTACCTGAC  86 30
LQF52_RS00270 NONE
LQF52_RS00275 NONE
LQF52_RS00280   63064 ..   63093 +  -7.9  -5.07486   GCTAAATATAATAAA       GCCGGAAG-GATCT TGG GGATCGCTTCCAGC       TTTTTATTACAGATA  87 52
LQF52_RS00305 NONE
LQF52_RS00310 NONE
LQF52_RS00315   70127 ..   70156 +  -7.9  -5.07486   GCTAAATATAATAAA       GCCGGAAG-GATCT TGG GGATCGCTTCCAGC       TTTTTATTACAGATA  87 52
LQF52_RS00350   81283 ..   81298 +  -6.2  -4.27007   TTTTCATTTTACGCG              TACCTT GAGG AAGGTA               TTTGTTACGTATTTG  70 144
LQF52_RS00355   82216 ..   82233 +  -4.8  -3.28712   GCGCGGCTGCGTTTA             TGGCTG CCTTCC CAGCCG              TTGTAGCACAAGGCC  54 2
         ggt   84131 ..   84149 + -13.1  -3.08639   CTTTCCTATAAGTTA             GCGGCCC AGAAA GGGCCGC             TCTATTGAACCTATT  86 46
        bcsE NONE
        bcsF NONE
        bcsG  106332 ..  106356 + -12.9  -3.28979   CATCCCATCATGTTA          TCGGGCAGG CGAGAAT CCTGCCCGA          TTCCCTTGTCTGTTC  95 44
LQF52_RS00425  107847 ..  107862 +    -4  -5.04597   CCTGAATATTCATAG              GTAACG CAAA TGTTAC               TTTTTATATATAGGT  76 36
LQF52_RS00430  109492 ..  109520 + -15.4  -5.71712   CGTTTTCTAAATCAG       TTCCCCAC-GGCG CTAA CGCCCGTGGGGAA        TTTTTTTGTCTGCCA 100 69
LQF52_RS00435  111359 ..  111384 + -13.3  -3.79906   TTTAATCAGAAAATA         GAAAAGGCCGC GATT GCGGCCTTTAC          TTATTATCACGCTAC 100 59
LQF52_RS00450  115204 ..  115219 +  -2.5  -4.71426   TGTTGCAGCTTCTTG              CCGTC AACGTC GATGG               TTTTGTTGGTGACGA  68 256
        tusA  117073 ..  117112 + -10.1  -3.21981   CCCGTCATACTTCAA GCCG-C-A-GGTGCGCGGTG TTG CACCGCGCACCGTAGACCGC TATTAGTCCTGTTTT  74 43
LQF52_RS00480 NONE
LQF52_RS00485  121499 ..  121532 +  -8.1  -3.63837   CCACGCGTCTGGTGC     CA-GCCAGCCCTGTTG TTC CAGCAGGGCAAGCGTG     TTGTTCAGCAGTTCT  68 463
        ftsY  123794 ..  123804 +  -3.2  -4.08767   CCGAGAGGATTAAAA                 CGGA TGA TTCG                 TTTTGAACAGGTCAG  57 28
        ftsE NONE
        ftsX  125611 ..  125624 +  -2.4  -4.25676   CGAGCGAAATCACAG               TCTG AATAGA CAGA                TTTTAGGATTTGATT  57 210
        rpoH  126657 ..  126677 + -10.3  -5.38839   CGTCTCTTTCTGTCG            CGACCGGGT AAT GCCCGGCCG            TTTTGTTTTTGTCTG 100 51
LQF52_RS00525  128693 ..  128725 +  -9.2  -3.04144   ATCATCATGCCGGGA     GGCGGGTAACGG-GT GAAG ACGCCGTTGTCTGCC      TCTTCGGCGTGGAGA  68 40
        livH  129758 ..  129785 +  -3.5  -2.71269   CCGGAGGTTGAGAAA        GTATGAAACAG CTCAAC CTGTTTAATGC         GTTGGTTTCCGCCTT  43 20
LQF52_RS00535 NONE
        livG NONE
        livF  132594 ..  132613 + -12.8  -3.73072   AGGGGGAATCGTTAT            CGGGCCGG TTTA CCGGCCTG             TTTCGTAGAAGGGTT 100 111
LQF52_RS00550  133857 ..  133886 + -12.3  -5.09426   TTGCCTGCTAATGTG       AAAAAACCGCTGA TATT TCAGCGGTTTTTC        TTTTTTAGCGTTGCG 100 55
        ygbI  149072 ..  149086 +  -6.4  -3.19389   CTGAATTTCTGCACC               GCTCAT TGC GTGAGC               TTGCTCGATGCGTTC  57 229
LQF52_RS00620 NONE
LQF52_RS00625  151268 ..  151280 +    -2     -2.89   TGTGTAGCATTTTTG                TACA CGTCA TGTA                TAGTTGTATAGAGAT  41 88
LQF52_RS00630 NONE
LQF52_RS00635  152118 ..  152135 +  -4.1  -3.46336   TTCCAGCTATTTTTC             TGTCATG CGCT CATGTCA              TGTTTACCTTCGCAT  52 77
        ugpB  153555 ..  153576 +  -9.4  -3.27852   TTTGTCGAGTAATAT           CGGGCCGA AGGGAA TCGGCCTG            CTTCTTTTCTGTTTG  74 47
        ugpA NONE
        ugpE NONE
LQF52_RS00655 NONE
        ugpQ  157351 ..  157364 +  -3.7  -2.88861   GCAAACTTCGTGACC               GGCTG AGGT CTGCC                TCTATACCCGTCATA  46 20
LQF52_RS00665  158406 ..  158447 +  -8.8  -2.73554   CGCCGTTGATTTTAA CGCTGATG-GGTGTGCGGCT ATAA GGCCGC-CATCGCATCAGGG ATTCTGCTTAATTGG  64 3
LQF52_RS00675  159416 ..  159430 +  -3.4  -5.08824   TGTTGCTTGCTACAG               CCTGCC GTT GGCGGA               TTTTTTCAGTGGCGG  74 42
        cpxP  165403 ..  165421 + -14.6  -5.82388   CATCCCTGTCTTTTT             GCCCTCCA TGA TGGAGGGC             TTTTTTTTGGGATTT 100 137
LQF52_RS00705 NONE
LQF52_RS00710  166342 ..  166355 +  -5.9  -5.71712   ATTGTATTGCTGCGA               CTCGC TTCG GCGGG                TTTTTTTATCTGAAA 100 40
LQF52_RS00715  170347 ..  170375 + -12.5  -3.72078   TTGGTAATCCGCTTA        TGGAGCCAGTACA CCT TGTGCTGGCTTCG        TTCATTATTTTGTGG 100 34
LQF52_RS00720 NONE
LQF52_RS00725 NONE
LQF52_RS00730 NONE
LQF52_RS00735  177476 ..  177489 +  -2.3   -4.1899   CATGAATGTTCCCTT               ACCTG TCTT CAGGC                TTTTGGCTGACATCC  57 146
LQF52_RS00740 NONE
        fieF  179952 ..  179968 +  -5.1  -3.59979   GGCGTTGCTGCCTGT              TTCACGG CGG CGGTGAA              TTTACGATAGAAGAA  57 164
        pfkA  181104 ..  181138 +  -8.5  -2.63102   GCAGGGATGCGGCGA     AAGCTTGCGCCACGT CGGGA ACGTGTCGCAAGCGG     TCCTCTAAGCCTGAT  63 147
LQF52_RS00755  182642 ..  182652 +  -4.6  -3.09492   GTCGTAATAACGAAA                 GCGC GTA GTGC                 TGTTCCAGTTGCCGC  47 261
LQF52_RS00785 NONE
LQF52_RS00790 NONE
LQF52_RS00795 NONE
LQF52_RS00800 NONE
LQF52_RS00805  194164 ..  194181 +  -6.9  -5.54907   GATCATCAATAGAAA             CCGCCGT GAAA AAGGCGG              TTTTTCTTTTCTGCC 100 72
        aguB NONE
        aguA  196497 ..  196523 + -10.9  -5.06414   GCTCGCTATAAAAAA        GCCGGTT-GCGC GACA GCGTGAACCGGC         TTTTTATTAGACGAA 100 88
LQF52_RS00830  198793 ..  198840 +  -4.3  -3.54488   TACCAATAGTTTTCA GCAGTCATATGACC-GG-GTCTGC GGC GCAGGTGCTTGGTCATTTGAC-GC TCTTCTTTCAGCAGC  54 59
        zapB  204177 ..  204191 +  -8.5  -5.31275   GAGCCAAATAAAAAA               GGGCG TGTAT CGCCC               TTTTTTGTGGTGAGG  95 81
        rpmE  212902 ..  212925 + -15.4  -4.13973   TACAGTAACTTTCTG          CAAAGGCACC TACA GGTGCCTTTG           TTGTTTCTGGTATCT 100 59
        metB NONE
LQF52_RS00935 NONE
LQF52_RS00940 NONE
LQF52_RS00945  223333 ..  223373 +  -5.4  -2.61728   TAGATACCCCTTAGC ATCACATGCGCTCTGGC GGGATGAA GCCAGAGCGCG-GAGAC  ATTCATGTTGCAAGT  50 52
LQF52_RS00950 NONE
LQF52_RS00955 NONE
LQF52_RS00960 NONE
LQF52_RS00965  227029 ..  227059 + -16.2  -3.54543   CGGGCTTTACGGACC       GCTTGCGACACGTT CCC GACGTGGCGCAAGC       TTTCGCCGCGTCCCT 100 224
        metF  228341 ..  228362 +  -9.5  -3.15574   CGGCTCTGAAAAGGA           GGAGTCTCA GGGA TGAGATTCC            TATTCATGCGGTTCG  72 129
        oxyR  229814 ..  229858 + -10.9  -4.22009   TGCCATGGTTGGATA GTTGAAGGTGGTATTAACGAA ATA TTCGATAGTATTACCTTCACC TTTCTGTTCCATGAT  86 80
        fabR NONE
LQF52_RS00990  232432 ..  232451 +   -15  -2.73006   TGTAGCAGGTGGATG            CTGGCGGG GTAA CCCGCCAG             ATTGTGTGCGTTACT  89 36
        btuB NONE
        murI  236749 ..  236761 +  -4.7  -3.40403   CCACTGACACGGCAA                CAGCG ACA CGCGG                TTGTGGTGACAGGAA  52 126
LQF52_RS01010  238560 ..  238580 +  -2.5  -2.55015   AACCTGCGGTTGGAT            CACCTCCTT ACC AAGAAGATG            TGCGTTGAGTGAAGT  40 16
LQF52_RS01015 NONE
LQF52_RS01020  238860 ..  238893 +  -2.3  -4.49756   TCGCTGTGTAGAAAA     CTTCAGAGTGTACCT GTTT GGGTGCACTGCGACG      TTTTGCTCTTTAACA  61 48
LQF52_RS01025  241971 ..  241981 +  -6.8  -4.34402   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGGTGTGACGAA  74 30
         rrf  242215 ..  242264 + -16.7  -4.09117   GGAACTGCCAGGCAT CAAATAGAATGAAGGGCCCAGTC GAAA GACTGGGCCTTTTGTTTTATCTG TTGTTTGTCGGTGAG 100 28
        murB NONE
        birA  244545 ..  244557 + -10.5  -4.28656   GGTGCATAAAAAAGG                GGGGG ATT CCCCC                TTTTACATATTCGGT  85 32
LQF52_RS01055 NONE
LQF52_RS01060  246803 ..  246816 +  -6.7  -3.09327   CACCACCAAATTCAA               TCCTG GCAA CAGGA                TATTCGATACGGTAG  58 33
LQF52_RS01065 NONE
LQF52_RS01070  247127 ..  247140 +  -6.7  -2.57944   TGTGAATAAATTCAG               CAAGC TATC GCTTG                GTTGATGTGGTGATA  55 70
         tuf  248409 ..  248426 + -11.3   -4.8667   CGACACGCGATAAAA             GGGCATC ATTT GATGCCC              TTTTTCTACGCTGTC 100 60
        secE NONE
        nusG  249582 ..  249610 + -16.2   -5.2853   TAGCGACTTGCCTAT        GGCGCGAAATTA ACCTA TAATTTCGCGCC        TTTTGTTTTTCAGTG 100 65
        rplK NONE
        rplA  251028 ..  251050 +  -2.1  -5.18357   AGAGCCTAAATAACG           TTTTTCTTT TTTAT AAAGAATAA           TTTTTTACTGGATTC  74 212
        rplJ NONE
        rplL  252128 ..  252153 + -17.7  -4.64766   ATTTATTAGGCTGAT         GGCTGGTGACT TTTT AGTCACCAGCC          TTTTTGCGCTGTAGG 100 65
        rpoB  256426 ..  256454 +    -6  -3.71552   GCTGGGTATCAACAT        CGAGCTGGAA GAAGAGTAA TCCCAGCTCG        TTGTATTGCTGGCAT  64 7
        rpoC  260815 ..  260835 + -13.3  -5.64274   GGTAAATAGCAGAAA            CCCCGACTA TGA TGGTCGGGG            TTTTTTTATGGCTGA 100 66
        shiA  262365 ..  262401 + -15.3  -3.66574   CGCCTCACCAATCTA    GCGTGCCGATACAGATA CAG TGTTTGTATCGGCACAC    TTCTACTGTTTTTTG 100 47
LQF52_RS01130  264490 ..  264500 +  -8.2   -2.6062   CCGCTTCGCAAATCA                 GGCG TAT CGCC                 GTCTTATCTGCTCAG  59 276
        nudC  271791 ..  271820 +  -7.9  -2.67981   GACGTGGTACTATTA       TGCGTCATAAAGC GTTT GCCTTATAACGCA        TCCGTTTCATCACAT  59 39
        hemE  272944 ..  272956 +  -3.4  -2.93723   CTTATCACGCATGAT                TCAC AGGAG GTGA                TGTGATTGATACACA  44 27
         nfi  273665 ..  273681 +  -2.9  -2.76162   CTTTAGGAATTCAGG              CATAGGG CGT CACTGTG              ATTTCAGGTACACTG  41 43
LQF52_RS01185  274336 ..  274349 +  -5.2  -3.08867   TAAAACGTGATTTAA               GGCC TGAAAT GGCC                TGTCTTAAGGCTTCA  51 46
        hupA NONE
LQF52_RS01195  275633 ..  275650 +  -6.9  -3.26719   ATCTGGCTATAAAAA             ACCCGGA TTTC TCCGGGC              TTCAGTATTTATCAG  59 175
LQF52_RS01210  280853 ..  280863 +  -3.2   -4.8048   GTGCCGGATTTTTAA                 TTCG GTA CGGA                 TTTTTCGTGTCCCCA  69 147
LQF52_RS01215  280980 ..  281017 +  -6.5  -3.45839   AGACATTATCATGAA   TATCTTAAAGATGATTC TTCG GAGTCATGTTTACGATA    TTGCTCTTTAACAAT  60 58
LQF52_RS01220  284094 ..  284104 +  -6.8  -4.34402   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGGTGTGACGAA  74 30
         rrf  284352 ..  284373 + -12.3  -4.80882   TCAAACACGTGGAAA           GCCTCTGTC GAAA GACAGGGGC            TTTTTGCTATGGGAT 100 42
LQF52_RS01260 NONE
LQF52_RS01265  293043 ..  293061 +  -4.7  -4.87665   CGTTGAAATACTACT             TTAACTT CCTGA AAGTTAA             TTTTTGTGAGTGGAA  73 271
LQF52_RS01280  294367 ..  294377 +  -2.4  -2.66695   TCGCCTGCCTGTTCA                 GGAG GTA CACC                 ATGTTTGATAACACG  39 7
LQF52_RS01285  294642 ..  294669 + -11.3  -5.07053   GAAGGCAAAGAAAAA        GGCGCTTAACC AAAAGA GGTAAAGCGCC         TTTTTTCAAATGCTT 100 98
LQF52_RS01320  300945 ..  300962 + -12.7  -4.21275   GGCATAAATAACAAA             GGCCAGC ATAG GCTGGCC              TTTTGACTCGATTGC 100 165
        csrD  308673 ..  308684 +  -3.6  -3.83502   TGAAAAAATATTCAC                CGCG GCAT CGTG                 TTTAATATAAACGTC  53 9
        mreB  310105 ..  310115 +  -2.4  -5.65927   CGTTTTTCATCTCTC                 GTGG TTA CCCC                 TTTTTTATTTGCCTG  86 81
        mreC NONE
        mreD NONE
LQF52_RS01375 NONE
         rng NONE
        yhdP NONE
        tldD  319214 ..  319238 + -13.7  -5.67967   GTACTTGTGTAACAA          TCCGTAATCTC ACA GGGATTACGGA          TTTTTTTATGCTACT 100 124
LQF52_RS01395  321011 ..  321023 +  -4.8   -4.2704   CCAGCGCTTTACGCT                GCAC ATCCA GTGC                TTTCTTAATCATGGG  66 474
        aaeX NONE
        aaeA NONE
        aaeB NONE
LQF52_RS01430  327768 ..  327816 +  -8.3  -3.34534   AGCTCAACGAGCTAC CGGTAATACATGGGATGAGTGAG GCATA CTC-CTCATCCCACG-ATCGCCG TTAGTCTGTGGTCTC  69 74
        pmbA  330029 ..  330050 +   -13  -3.24637   TCGTGAGTAACCGTC           GCCGTCGG CAGTGT CCGACGGC            TGTTACTCTATCTCT  91 50
        mlaF NONE
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB  342298 ..  342336 + -16.8  -4.44046   GTAACGCGGGTTACC   GGATTCGCCCCTTTAGGC ATC GTCTGAAGGGGCGTATTC   TTTGTTTAAGATAGC 100 44
        ibaG  342648 ..  342662 +  -2.8  -2.66296   AGAGTGGCAACGCGA               CCGT AAACTGA ACGG               CTTCTAAGTATTATT  40 4
        murA  344044 ..  344063 +   -15  -4.58585   AATTAGGTTTGTCAG            CCGGGTGG GTTC CCACCCGG             TTTCTTGTTTACCTG 100 54
        zapE  348736 ..  348762 +  -6.4    -5.243   GAGTACTTACGGCAG         CCGCATTTGGCG TAA CGCAGGCTGCGG         TTTTTTAGTCATTTG  87 11
        rplM NONE
        rpsI  349862 ..  349880 + -11.7  -5.76633   AATCAATGCAAAAAA             CCCGGTG CTGGT CACCGGG             TTTTTTTATGTCTAG 100 62
LQF52_RS01585  354422 ..  354434 +  -6.3  -4.20027   TCTGAAATGTACCCA                TAGTG ATC CACTA                TTTATCTAATTTATT  70 166
LQF52_RS01590  355904 ..  355940 + -14.5  -3.60792   TGCTTTAATTTCGAT    TACTTAGAAGCCGACGG CCC TCGTCGGCTTCTAGGCG    TTTGACGCTTCAACG 100 64
        sspA NONE
        sspB  357442 ..  357460 + -11.7   -4.4634   TGAAGTAATGTTTAA             GGGCACC CTTGT GGTGCCC             TTTCTTATTCCCGTT 100 33
LQF52_RS01610  359234 ..  359251 +  -5.5  -3.24747   CGTACTGCATCGCCA             CCCGCAA AAAT TTTCGGG              TTACTGGTCTGGAAC  52 202
LQF52_RS01625  366666 ..  366685 +  -3.5  -4.33151   TGTGAATCTACGGGG            TAGCGCC GTATAA GTCGCTA             TTTTACGTTATGATG  62 82
        arcB  369373 ..  369384 +  -3.6  -2.54803   TCAGGGTTTGTAAAC                TCGC AAGT GCGG                 ATATTCGTGTCTTAA  42 300
        elbB NONE
        mtgA NONE
LQF52_RS01645  372429 ..  372450 + -14.5  -5.75538   ATCGAGATAAAAAAA           CCGCTGATG TTTT CATCAGCGG            TTTTTGTTTTTTAAA 100 87
        rsmI  377034 ..  377050 +  -5.1  -3.28712   TCGGGGGATGACAAG              TAGGGCA ATT TACCCTA              TTATCCGCGCCGGAG  54 23
        rnpB  377445 ..  377470 + -14.1  -3.49419   CAACTCCCTTCATCA         TAAAACCCCGC TTCG GCGGGGTTTTG          CTTTTTATGAAAGAA 100 30
LQF52_RS01680 NONE
LQF52_RS01685  378498 ..  378523 +  -2.5  -3.53091   ACGGCGATGGAAAAC         CCGCGCACCATC CAT GATTTTG-GCGG         TTTCCCGCAGGCGCT  48 387
        nudF NONE
LQF52_RS01715 NONE
        cpdA NONE
        yqiA  385845 ..  385857 +  -2.6  -3.33815   GCATTGAAAAACGAA                TCGC CGAAA GCGG                TTCGTTAAACACCAT  46 53
        parE NONE
LQF52_RS01735  388788 ..  388805 +  -6.3  -2.91144   GATCAGGAAAAGTGT             TCGTCCAG ATG CTGG-CGA             TAATTTGCAAGATAA  55 79
LQF52_RS01740  390513 ..  390542 +  -8.6  -3.85698   AATATCATAGCCGTT       GTCCACGACCGTC ACGCG GACG-TCGTGGCC       TTTATCGCGCAGGAA  71 445
LQF52_RS01785 NONE
LQF52_RS01790  400282 ..  400308 +  -4.5  -4.88407   CAATACGCGCTATTC        GTCAGCG-GT TGCGAAAT ACACGCTGAC         TTTTTCCTTCGCTGC  75 0
LQF52_RS01795  400908 ..  400918 +  -5.4  -3.70773   GAGTCGCAGCACGGT                 TCTC TGT GAGA                 TTGTTCCCTGTGACA  59 87
        parC  403333 ..  403357 + -15.1  -4.08317   TCATGTGCATGTTGA          GAAAGGCGGTG CCA TACCGCCTTTC          TTTAGTTTCCGGTTG 100 54
LQF52_RS01805  404201 ..  404213 +  -3.3   -4.2204   AAAATAAGTTTCCCC                TCGGG TTA CGCGA                TTATTTCTTCCGATT  60 34
        ftsP  405744 ..  405767 +  -6.6  -2.97485   TTCTCCGCGTTACCC          CCGCCGTGAC AAAT GTGACGGCGA           TGCTTATCTGTTTCT  56 62
LQF52_RS01815  407196 ..  407210 +  -2.7  -4.67697   CGACCTGATCGATGA               CCGGC AAGAC GCCCG               TTTCTTCTTTTAACC  67 437
LQF52_RS01835  411109 ..  411139 + -10.4  -5.00616   AAGACGTGAAGAAAG       CGTGCCGTTGCC CGATTTA GGCGACCGCACG       TTTTTTGCGCCACAC  93 40
        exbB NONE
        exbD  418729 ..  418755 +  -7.3  -5.51402   GTTGTGTTGTAAGAA         GGAATGCGG GCGTTCAAA CCGCGTTCC         TTTTTTTACGTCTGT 100 50
LQF52_RS01900  426389 ..  426399 +  -4.6  -2.57931   GAGCAATGCGCCAAC                 GGCG TGA CGTC                 ATTCTGACAGGTAAC  46 19
        cas3  429231 ..  429241 +  -5.4  -4.09556   GTCAGAGATGACGCT                 TTGC GTT GCAA                 TTTGCTTTAAATCTG  65 120
        casA NONE
        casB NONE
       cas7e NONE
       cas5e NONE
       cas6e NONE
       cas1e NONE
       cas2e  436549 ..  436562 +  -5.3  -3.01712   TGTTATAAAACAACT               CTCTA CTTT TAGAG                TGTTCCCCGCGCCAG  51 97
LQF52_RS01965  439872 ..  439895 + -16.8   -3.1733   ATGAAGTCCCTTTCT          CTATCCCCGC GCTT GCGGGGATAG           TCGTTTTATACCGCG 100 64
LQF52_RS01980 NONE
LQF52_RS01985 NONE
LQF52_RS01990  444465 ..  444495 +  -5.4   -4.1899   TGCTGCCGCGCCAGA       TCAGTGCGGGATCT TTC AGATCTTGCACAAA       TTTTCCATCGACTAA  65 81
LQF52_RS02020  450777 ..  450805 +  -5.7  -4.07568   GCCGCCTGACACTCA        GCCACCAGACCGG CAT CCGGCCAGCAGGC        TTTTGGCGCAACAAG  67 482
        rraB  452004 ..  452025 + -12.9  -5.49234   ACGCCTCACTGAAAA           CGCCGCCGG AACC CCTGCGGCG            TTTTTTATTCGGTAT 100 67
LQF52_RS02040  454154 ..  454169 +  -2.5   -2.8937   AAGCCGTGCAAGCGC              TCGAC TTGGGT GTCGG               TCTCTAAAACTATCT  42 3
LQF52_RS02045  455416 ..  455444 + -12.5  -4.16814   ACCCTGCCTTGTGTC        AATCGTGTGTGGT GTC ACCGCACACGATC        TTCTTTCTATACTCG 100 72
LQF52_RS02050  457076 ..  457112 + -13.1  -4.61868   ATAAAAAATAAAAAT    ACATGACCGGCAGAAAG TTT CTTTCTGTCGGTCATCA    TTTTCTATATACGTC 100 30
LQF52_RS02055  459128 ..  459139 +  -2.2   -3.9534   ACGGGTTTGCCATGC                CGTT GGCC GACG                 TTTATCGCTGTGGCT  54 250
        lptF  465990 ..  466018 +  -3.8  -2.91264   CTTAGAACACAAGGA        GCGGCCTGATGT TTGGT GTATTAGACCGC        TATATCGGTAAAACG  46 17
        lptG  467095 ..  467120 +  -7.6  -5.52023   AATAAGTCAGAGAAA         GCGCTGAGTGA ATCAA TC-CTCGGCGC         TTTTTTATTGGTCGT 100 46
LQF52_RS02090  467405 ..  467420 +  -6.8  -5.66684   TAGTATGAAAATTAA              GTCACC TCAG GGTGGC               TTTTTTTATGCCTTA 100 41
LQF52_RS02095 NONE
LQF52_RS02100  469358 ..  469408 +  -4.7  -2.91452   ATAAACTCCTTTCTC TTTAGCGGCTTCC-TGGCACGT-AT GGC ATGACGTGCCTCGGGAGCCGCACAC TATCATTCGAATGGT  48 37
LQF52_RS02105  470788 ..  470811 + -12.4  -3.87412   AAACCGTAAACCTCT          TGCCCCGGCG TACC TGTCGGGGCA           TTCATTTTTAATGTT 100 32
LQF52_RS02160 NONE
LQF52_RS02165 NONE
LQF52_RS02170 NONE
LQF52_RS02175 NONE
LQF52_RS02180  487061 ..  487071 +  -4.6  -3.17713   GGGCGAAATTGACGT                 CGCT GAT GGCG                 CTTTTCAGCTTTTTG  49 144
LQF52_RS02190  489027 ..  489072 + -12.1   -3.9978   CAGCGAGGTGAGTTT TATCCCTTAAAGCGGATAATT GTTG ATTTATCCCCTTAAAGGGATA TTGTTAGTTTTATCC  93 62
LQF52_RS02195 NONE
LQF52_RS02200  490743 ..  490768 + -14.8  -2.88999   GCGGCCTCGCGATTA         GCAACGCCCT CCACTA AGGGCGTTGC          TGTCATGTATGGCGG  89 113
        rhaS NONE
LQF52_RS02255  507620 ..  507632 +  -9.1  -4.32034   ATAAGAATGGGAGCA                CGGTC TTC GACCG                TTTTCATCATGGTCG  84 500
LQF52_RS02290  513632 ..  513647 +    -4  -3.30441   TTGGTTAAGGTGCCT              GTTGAT GCGC ATCAGC               TTCTGGGAAGTAATC  50 50
LQF52_RS02295  514262 ..  514277 +  -2.6  -4.07885   CGTGAAATTATGAGT              TACTGA ACTG TTAGTA               TTTTACACAAAAATA  56 131
LQF52_RS02300  515292 ..  515314 +  -6.2  -5.50723   AAGTCCATTCCAGAA           CGCCTTAAGG ATC TCTCAGGGCG           TTTTTGTTTTCCTGG 100 138
LQF52_RS02335 NONE
LQF52_RS02340  520914 ..  520933 +   -15  -4.13767   GCCTGATACACTGGA            CTCGCCGC TGCG GCGGCGAG             TTTTGCACTCGACAG 100 35
        zapA  528062 ..  528087 +  -5.5  -4.56597   GCACAATTTGAATAA         CGTCGTATTTT GACA AAAGTACGGTG          TTTTTACGCGAGAAG  72 26
        ssrS  528303 ..  528319 +  -5.1  -3.48091   GTTACAGCCTGCGGC              GGCATCT CGG AGATTCC              CTTTCTTTTATCATT  56 9
LQF52_RS02395  529189 ..  529213 +  -4.1  -4.17048   GCTGCCTAAGCTACG          CAGTCCGTCGG CTA CCCACGGCGTG          TTATTTTCCAGCAAG  60 208
LQF52_RS02415  534025 ..  534042 +  -6.3   -4.8143   GCTTTCTGGTGAGCG             CTGCTAT CCAC ATAGCGG              TTTTTCAGTTCTTCC  78 444
        prfC  536541 ..  536580 +  -2.8  -5.63236   TGTTAAAATAATCAT  CACCCGGTTATGCTTGGCT TTA GGCCAAAAGTG-CTGGGTG  TTTTTGTTTTTAAAT  89 108
        osmY  537569 ..  537583 +  -4.2  -3.30441   CTGACAGTCAAATAA               CCCTTT GAT ACAGGG               TTATCCGCAATGGTG  50 26
LQF52_RS02435  537930 ..  537948 +   -16  -2.93623   GTCATACAGAGCACA             CAGCCGCG CCA CGCGGCTG             TCATATTTTACCGGC 100 80
LQF52_RS02440  538269 ..  538296 +  -6.4  -4.07568   GTTCTTGGGCGTAGA        TTAGGTCGCCTCA TCT TGACG-GACCTAA        TTTTGACGGAGAGAA  68 92
LQF52_RS02445  539346 ..  539384 +  -8.8  -5.35365   GGCCACTCTTTATAA   TCGGCTCGCCAGGGCG TACTTAC CGTTCTGGCGAAACGA   TTTTTATTCTGTTTT 100 257
LQF52_RS02450  540742 ..  540761 + -11.4  -3.89354   GCAGTAGCGAGATGA            TGGGCGGC GAAA GTCGCCCA             TTGTTCGTTTAAGCC  91 59
LQF52_RS02455  541966 ..  541977 +  -4.4  -3.70863   TCGACGATGGTCCAG                TTGG TGGT CCAA                 TTTAAATCATCTGTC  55 417
LQF52_RS02470 NONE
LQF52_RS02475 NONE
LQF52_RS02480 NONE
LQF52_RS02485 NONE
        dhbA NONE
LQF52_RS02495 NONE
LQF52_RS02500  561444 ..  561466 + -19.2  -3.16564   GACGTCTGACAGTAA           GAGGGGCAGC GCT GCTGCCCCTC           TTACTCGCGTAAAAC 100 32
LQF52_RS02550  584325 ..  584351 +  -2.5  -3.70511   AGCGACCAGTCAGGG        GTGTTTTGCTTA TAGC TAAGTAAAA-AC         TGTTTATCTTGAGTG  50 466
LQF52_RS02565 NONE
LQF52_RS02570 NONE
LQF52_RS02575  587038 ..  587053 + -10.4  -4.50761   CCCAAAAGCAAAAAA              CCAGCC GTTA GGCTGG               TTTCTTTAAATTAGT  89 65
LQF52_RS02580 NONE
LQF52_RS02585 NONE
     dnaB-PI NONE
LQF52_RS02595  591696 ..  591712 +  -5.1  -3.21747   GATGCCCGTGGAGGT              GACCATG TCG CATGATC              TTGATGATGAAATGG  52 11
LQF52_RS02600 NONE
LQF52_RS02605 NONE
LQF52_RS02610  593284 ..  593296 +  -4.8  -3.25802   AGGAAAAGGCGGGAG                GCTG AGATG CAGC                TTGCTGAGTTTCGTA  52 21
LQF52_RS02615 NONE
LQF52_RS02620  593919 ..  593929 +  -3.2  -3.33696   TTCTTATCATGAATG                 TCCG CGT TGGA                 TTGATTCAAACAAAC  48 230
LQF52_RS02625  595488 ..  595512 +  -5.8   -3.7282   CGTTTGCGTCAAATT         CGTGAAAC-CA ATAT TGAGTTTCGCG          TTGTTGGTGCAATCC  61 280
LQF52_RS02630  596345 ..  596361 +  -2.1  -4.03234   AATCGGTAGTCTGGA              GGGACGT TGT GCGCCTC              TTTATCTGCGAAAAA  55 32
LQF52_RS02635  598607 ..  598626 +   -15  -5.42259   GGTGCAGATCGTATA            GCGGTGCC TTAT GGCACCGC             TTTTTTTCAACATGA 100 267
LQF52_RS02640  600709 ..  600721 +  -3.4  -4.58685   GTTTTTCCATAGCCG                GAAG ATTGA CTTC                TTTTTCACCAGGTTT  64 186
LQF52_RS02645  601516 ..  601526 +  -3.2  -3.57798   ATTCTAAAGCGTATG                 CGGA GAA TTCG                 TTCTAATTCGTTCTG  51 9
LQF52_RS02650  602157 ..  602177 + -15.5  -6.60575   GTTTCGTAAACACAT            GCACCAGTC TTT GACTGGTGC            TTTTTTTTTTTACAT 100 32
LQF52_RS02655 NONE
LQF52_RS02660  602826 ..  602843 +  -9.1  -5.54907   AATCCAATAATGTAA             CGCTGGC TTCG GTCAGCG              TTTTTCTTTTCTGAG 100 52
LQF52_RS02665 NONE
        pilM NONE
LQF52_RS02675 NONE
       pilO2 NONE
        pilP NONE
LQF52_RS02690 NONE
LQF52_RS02695 NONE
LQF52_RS02700 NONE
LQF52_RS02705 NONE
LQF52_RS02710  612602 ..  612623 +  -3.7  -4.41616   TCGGGGTATTGTACT           GAAATGACG CTGA CGCTATTTC            TTTCTTTGGCCCCGT  64 19
LQF52_RS02715 NONE
        pilV  615115 ..  615141 + -10.8  -2.57795   TCCACGCACCGGATT         GGCAAAGCGCTC AAT GGGTGCTTAGCC         TGCCTTAATGATAAA  74 507
LQF52_RS02740  617297 ..  617322 +    -7  -3.85242   TTGGTAATTTTCACA         TGACGGTATT GAGTTA AATATCGTCA          TTCTTCTCCGTATTT  66 47
LQF52_RS02745 NONE
LQF52_RS02750 NONE
LQF52_RS02755 NONE
LQF52_RS02760 NONE
LQF52_RS02765 NONE
        traD NONE
LQF52_RS02775  623527 ..  623563 +   -12  -2.97925   ATTATTTTATTTAAA   G-TACAAGTTATATAGT GATA ACTATATAACTTGTAAC    TATATGATATGGAAT  80 69
LQF52_RS02780 NONE
LQF52_RS02785 NONE
LQF52_RS02790 NONE
LQF52_RS02795  627486 ..  627515 +  -2.8  -3.90112   GAATAAAGGAACTGC       CAGCGTTTCATC TAGGAT GACGGAACTCTG        TTTGATTGGAAAGGA  54 275
LQF52_RS02800  628287 ..  628299 +  -3.5  -4.66163   CGCTAGTATAGAAAT                TATTT GAA AAATA                TTTTTAAATAAGGAT  66 19
LQF52_RS02805  629619 ..  629635 + -10.9   -3.7941   ATCTCAAGCGAATAG              GGAGGAA ATA TTCCTCC              TTATTCTAACAAATG  85 70
LQF52_RS02810 NONE
LQF52_RS02815 NONE
LQF52_RS02820 NONE
LQF52_RS02825 NONE
LQF52_RS02830  631726 ..  631750 +  -2.1  -2.63301   AAAATCGGGGGTATT          CCAGTGAAGTT GAA AGCCTTATTGG          TGATATGCGGATCTC  39 19
LQF52_RS02835 NONE
LQF52_RS02840 NONE
LQF52_RS02845 NONE
LQF52_RS02850 NONE
LQF52_RS02855  635804 ..  635814 +  -2.4  -4.55826   CTTTGCCGGGCGAGC                 GGAC GGA GGCC                 TTTTAATGTTTTCAC  61 9
LQF52_RS02860 NONE
LQF52_RS02865  639234 ..  639247 +  -2.3  -3.59946   TACAAAATTTCCGCA               AAGGC TTAG GCCTA                TTATCTGATTGAGAA  49 219
LQF52_RS02870 NONE
LQF52_RS02875  642307 ..  642318 +  -4.4  -2.89564   TGCCCGTGGCGTCCG                TTGG TACA CCAA                 TGTCTCCGATGCGAC  48 109
LQF52_RS02880  643952 ..  643997 +  -2.8  -3.96386   TCAATAGGAAAAGCC CTGATAGA-GC-TGCTCATGAAC AGC GTTGATGCGCAGGCGTCT-TCAG TATTATTTTTTGTGG  54 517
LQF52_RS02890  646482 ..  646499 +  -5.5  -5.75538   GTAATAGGGCACTAA             TGCTGGC TTCG GTCAGCG              TTTTTCTTTTTTGAG 100 155
LQF52_RS02895 NONE
LQF52_RS02900 NONE
LQF52_RS02905 NONE
LQF52_RS02910  650203 ..  650214 +  -2.2  -2.55242   CGGCATAAGGAGCGA                TCGT GACA GCGA                 ATAGTTTTCTTGAAT  39 33
LQF52_RS02915  651773 ..  651801 +  -9.1  -3.75897   TACGGTAAAAATAAA        GTTAACTGTAT AGAATGC ATACAGTTAAC        TTTACATTACCAGTT  77 58
LQF52_RS02925  653671 ..  653681 +  -6.8  -3.57971   GAGCGGTCGGCGAGT                 GTCG AGC CGAC                 TTTCCCGGTGGGTAT  64 120
LQF52_RS02935  656708 ..  656747 + -14.4  -4.98531   TGCCATCCACCCGTG  CGGGGAAGATTTCTTCCC GTGT GGGCAGAAATGTTCTCCG   TTTTTCATTTGGAGA 100 361
LQF52_RS02940  657135 ..  657163 + -14.7  -4.67038   ACTCATACCCACATG        GGGATTTATCCCC AGT GGAGATAAATCCC        TTTTCGTTTTGAAAC 100 45
LQF52_RS02945  657700 ..  657727 + -11.4  -3.68265   TGACTTAACCCATGC        GGGATTTATCCT GCTG GGGATAGATCCC         TTTCACATTGAATTT  87 56
LQF52_RS02950 NONE
LQF52_RS02955  658628 ..  658655 + -12.8  -3.68265   CAACTTAACCCATGC        GGGATTTATCCC GTTG GGGGTAGATCCC         TTTCAAATTGAATTT  95 66
LQF52_RS02960  659021 ..  659050 + -15.1  -4.19238   AACTTAACCCATACG       GGGATTTTTCCCC TGAG GGGGATAAATCCC        TTTTCAAATTGAAAA 100 90
LQF52_RS02965  659527 ..  659554 +  -9.2  -4.59773   ACCTAACCCATATGG        GGATTTTTCTCC TATG GGGGATAAATCC         TTTTTCAAACTGAAG  90 67
        radC  660520 ..  660553 +  -6.8   -5.7946   AGACGTTACCCCACG    GGGAGAGTCCTCTCCC GTAC GGGATAG--CTCTCCC     TTTTTTTATTACCAA 100 65
LQF52_RS02975 NONE
LQF52_RS02980 NONE
LQF52_RS02985  661534 ..  661563 + -13.5  -4.31397   CATATTACTAACCCT       GACGGGGACACCC GCAG GGGTGGACCCGTC        TTCTTTTATCGGAGT 100 46
LQF52_RS02990  662089 ..  662115 + -13.1  -2.65504   TTTGATTTTTCCTGA        GGGAGCCATCCC TCAG GGGATGG-TCCC         GATTTTTGATGGAGA  84 43
LQF52_RS02995  664107 ..  664135 + -14.6  -3.79164   AATTTAACCCCAACC        GGGCGTTTCTCC CGGAA GGGGAAGCGCCC        TTACTTTATTTGTAA 100 47
LQF52_RS03000  665029 ..  665044 +  -5.4   -3.0894   AACAACTCACCGGCG              CCA-GCG TTA CGCCTGG              TTGCCTGACTGATTA  52 2
LQF52_RS03005  666068 ..  666085 +  -9.1  -4.84527   CTTAAAAAACAGAAA             GCACTCC TTCG GGGGTGC              TTTTTGCTATGTAGA  90 36
LQF52_RS03055 NONE
LQF52_RS03060  676264 ..  676290 + -12.4  -3.68073   GAAAGACGAGAGAAA         CCAGAGGCAT CTAGAGA ATGCCTCTGG         TTCTTAAGTCCCGTA  95 109
LQF52_RS03070 NONE
LQF52_RS03075  678512 ..  678535 +  -8.8  -2.78384   CTAAGAGAAGCTGAC          GCCGCCAGGT ATCG ACCTGCTGGC           TATGGTGACGCAGGC  60 405
        fxsA  684757 ..  684783 +   -14  -5.28826   GAGTTGAAAAGCAGA         TAAGGATTATCA TAT TGATAATCCTTA         TTTTTTATCAGATTT 100 50
LQF52_RS03110 NONE
        groL  687036 ..  687065 +  -9.3    -5.626   TCTGTCCTTCAAAGA       GCACTATCTGGTC GCGA GACTGGGTGGTGC        TTTTTTTATGCACTG 100 106
        ubiC NONE
        ubiA  688651 ..  688668 + -11.3  -5.67063   GACAGAGACAAAAAA             GCAGCGA TTTC TCGCTGC              TTTTTTTATGGTGGA 100 49
LQF52_RS03135  691930 ..  691940 +  -2.4  -2.50699   ATGAGTAAAAGTCAG                 GGGC TTT GCCG                 ATATCTTCATTCCCA  39 53
        lexA  692765 ..  692783 +  -6.7  -5.04601   TACCCTTCTGTTTTT             TCACTGC TTTTT GCGGTGA             TTTTTCCTTTCTCAA  84 169
LQF52_RS03145  693319 ..  693339 + -15.5  -5.26875   CTTCGCTGAAAGAGA            CGATAGCCC TCA GGGCTATCG            TTTTTTAATTGGAAC 100 55
LQF52_RS03160  695696 ..  695711 +    -9  -3.13475   CATTTTTTGCGGCAA              GGTGTG GTTT CACACC               TTGCCTCTGCACTTC  70 47
        uxaC  704800 ..  704811 +  -3.6  -3.94773   CTTACGCCGCAACTC                CCGG TGTC TCGG                 TCTTTTGTCTTAAGG  55 101
LQF52_RS03220 NONE
LQF52_RS03225  707841 ..  707867 +  -2.4  -5.75342   CCAATTAAAATAAAA        CGGCGTTTCATT TTTAT AATGA--CGCCG        TTTTTTTTCGCCACA  86 53
LQF52_RS03230  708552 ..  708562 +  -6.8   -2.5474   AGACGCTCTTTTTCC                 GCCA GTT TGGC                 ATCTTCTGCCTGACA  51 144
        rlmG  713874 ..  713886 +  -6.2  -4.17657   TTCCCCAGATTTTCA                CCGG GTTTA CCGG                TTTTCCGCTGTAATA  67 350
LQF52_RS03260  716119 ..  716138 +  -7.1  -3.15078   GCCTTTAGACGTTCA            CTGCGGT AATCGC GCCGCAG             TATTAATACGATGTG  62 17
         spy  716894 ..  716940 + -19.6  -6.32017   ACCCAAGTCAGTAGA CCACCGGATTGACGTATTACCT CAC GGGTAATGCTTCGGTCCGGTGG TTTTTTTTATTTATT 100 76
LQF52_RS03270  718503 ..  718518 +  -2.5  -3.77489   AATCGTGTCTGCATG              CGTCT GGTCGA GGACG               TTTGAATCTTCCCTT  52 5
LQF52_RS03275  719142 ..  719180 + -24.9  -6.25242   ATCTTCTGGGCGAGA   CCTGGATAAAGCAGCGT ATAGC ACGCTGCTTTATCCAGG   TTTTTTTTTGCTTAT 100 213
LQF52_RS03280 NONE
LQF52_RS03285 NONE
LQF52_RS03290  724641 ..  724652 +  -5.8  -3.30338   GGTACATCTGCCGGC                GCAG CCCC CTGC                 TTCTCCGCACATTAT  54 492
LQF52_RS03315  730314 ..  730366 + -12.9    -5.626   CGGTCAGGACAATGG CGTCCACACAATCATGCTTTTCGC ATCAAG GCGAGA-GCAGGGTTCTGTGGACG TTTTTTTATGGCGTG 100 316
LQF52_RS03320  734762 ..  734778 + -12.3  -2.90956   TGGCTTTTGCTGGTA              TCAGGCG CAC CGCCTGA              TGTGTGACGTCCTTT  82 50
LQF52_RS03330  736759 ..  736780 +  -3.8  -4.52589   CCTGTTTTGCATTCG           TACA-TCGC AAATA GCGAGTGTA           TTTTCTGTGGGCCGG  66 91
         mug  739510 ..  739531 + -14.5  -3.96624   CTGACAGGCAAAAAA           TAACCCCGG CGAA CCGGGGTTA            TTTATCGTAGGGCTA 100 57
        tsaD  745325 ..  745355 +  -3.3  -3.91911   AATACACCATCTCCA      TTTTG-GCATTGCG CGTG CGCACTGCACCAAA       TTTCGTTAGCATGCG  54 419
         mdh  746953 ..  746984 + -14.6  -5.52384   TACGTGGCGTTGAAT      AAAAAGCCGGAGAT TGAT ATCTCCGGCTTTTC       TTTTTTTAATCGGGA 100 59
LQF52_RS03395  747908 ..  747938 +  -6.2  -3.92804   CTTTGTAGCACTTTT      TCTGGCCGCGGTG CCTGGT CATCGCG-CTAGA       TTTCATCATTTCTTC  66 106
LQF52_RS03400  748464 ..  748486 + -17.8  -3.35679   TAGTCTGGCGAACGA           GTAGCGCTGC AAG GCAGCGCTAC           TTATGAATCAACGAA 100 38
        rplU NONE
        rpmA  750374 ..  750395 + -15.9  -4.78752   GTCTTACGGATTTAA           GCCCCGCAA TTCT TTGCGGGGC            TTTTTACATTCTGAT 100 54
LQF52_RS03420  751621 ..  751633 +    -2  -3.93166   CAAGCCTAAAACACG                TAGA TATTC TCTA                TTGGTTTTTTGCGGA  53 249
        cgtA  752854 ..  752894 + -19.1   -4.4773   CTGCTAGTCAGCTCT  CGCCAACGCGGCCTTACCT TCA AAGTAAGGCCGCGTTGTTG  TTTTAATTGCTCTGA 100 50
        greA  755127 ..  755140 +  -9.5  -4.52589   TAAAGAAAAGAAAAA               GGCCG CTTG CGGCC                TTTTCTCTAACCGAG  89 77
        rlmE NONE
        ftsH  758301 ..  758318 + -12.7  -5.14965   CTGTAACTTACGAAA             CCCCAGC TCAG GCTGGGG              TTTTTTACTGGGACT 100 59
        folP NONE
        glmM  760720 ..  760734 +  -8.6  -2.71364   GACCCGCTTGATAAG               GGATGT TCT ACATCC               TGCTTAGCGGAATGA  64 178
        secG NONE
LQF52_RS03470  761262 ..  761298 + -13.4  -3.65143   CGTCCTCGGTACCAA   CATAAAAAATAGACGTC GATT GACGTCTATTTTTT-TG    TCTTTAATTTACTGT 100 27
LQF52_RS03515  779456 ..  779491 +    -4  -4.33675   CTTGCCCTCAAGAAT    GTTTGCTCTCAAGGGT ATTA ACCTTTAAGAACAATC     TTTTAATGGTCTGAT  64 239
LQF52_RS03535  782174 ..  782185 +  -3.6  -4.58283   CTTTCAGCTATTTCT                GGCG TCCG TGCC                 TTTTTGCAACGGTTG  64 112
LQF52_RS03540  782611 ..  782626 + -10.4  -5.72254   TCCAGTTGCATAAAG              CCCCGA TTTA TCGGGG               TTTTTTGTTATTTGG 100 163
        rimP NONE
        nusA NONE
        infB  787454 ..  787472 + -13.1  -2.65504   GTAAGTGATTCGTAA             GGGGGGC CTAGT GCCCCCC             GATTTTTACTGGAGA  84 59
        rbfA NONE
        truB NONE
        rpsO  789248 ..  789273 + -12.6  -3.29461   TTCTGAGTTTCAGTG         GGAAGGGGCC TCTTTT GGCCCCTTTC          TTCTAGGAAGCGTTA  90 44
         pnp  791620 ..  791657 +  -8.5  -2.94099   GTTAGATAACGGTCT   TATGGCACCTTGCC-TGA TTA TCATGGCAAGGTGCTGCG   TGTATCGTAAGGGAA  65 46
        nlpI  792665 ..  792680 +  -5.4  -3.88817   AAACTTCGGTTATCA              CCTTCA CGGG TGAGGG               CTTTTTTGTTCGCTT  63 66
LQF52_RS03585  794733 ..  794749 +  -9.4  -5.86061   TACTGCAATACAAAA              CGACCC TGAAC GGGTCG              TTTTTTTTGGTCAGA 100 61
LQF52_RS03605 NONE
LQF52_RS03610  799318 ..  799336 + -10.3  -5.02421   ATACAAAGCGTCTTG             GGCTGGT CTTGT ACCAGCC             TTTCTTTTTGGTTTT 100 84
LQF52_RS03620  801339 ..  801370 + -13.8  -3.05514   TTTCCTGCTCTGCCA      GCGGTTTCTCTCTG TACC TGGAGAGAAGCCGC       TATGCTTATTATATG  87 41
        deoC  802692 ..  802706 +  -3.6  -2.78384   CATACAGCGTACGAT               TTTGTT CAC AGCAAA               TGTGCTCGCAGCGAC  43 48
        deoA NONE
        deoB NONE
        deoD  806180 ..  806204 + -12.9   -4.2778   CGAGTAATATCACAT          CAGCCCGGA CATCCGC TCCGGGCTG          TATTTTTCTGTTTTT 100 34
LQF52_RS22185  812494 ..  812528 +   -10  -3.63515   AGAATTTCGCTTTCA     CGGCAGGGAAGGTGAA TTT TTCACCGTCTTTGGCG     TTGTTGGAGGTGACC  74 168
        rsmC  815397 ..  815407 +  -2.4  -4.58685   GGTTAATTTTCTCTA                 CCAG TTG CAGG                 TTTTTGCCGAAATTT  65 319
LQF52_RS03690 NONE
LQF52_RS03695  817389 ..  817400 +  -4.4  -2.94872   GAAGCAGTAAATCAG                TGTC GCAT GACA                 TAGTTATTACATGAC  48 73
LQF52_RS03700 NONE
LQF52_RS03705  818058 ..  818068 +  -5.4  -4.57569   GCAGGCTGTGATCAT                 TGCT GTC AGCA                 TTTTTCCACCCGTCA  73 445
        budA NONE
        alsS  821686 ..  821699 +  -5.3  -2.82742   ATATTAGTGTGCTGA               TCTGA TATA TCAGA                TGATTATCCGCCCGT  49 21
LQF52_RS03730 NONE
LQF52_RS03735  822936 ..  822965 + -10.9  -2.79248   AGATACAGTGAAATT       TGTAACTCACC CTTGAATA GGTGAGTTACA        TGATTGGATGTTAAT  74 51
LQF52_RS03745  825610 ..  825621 +  -7.2  -3.21276   GAATTGCGTTAGCGA                CGCC GTGT GGCG                 TGTTGTAGAACGCGC  59 393
        gcvT  828227 ..  828239 +  -7.7  -3.53761   GTGAGCGAGGACAAA                TTGGC TTA GCCAA                TTTGAACGCCGCTTG  67 133
        gcvH  828766 ..  828793 + -13.4  -5.27476   GACGAGTAGTTATCG        CGCCCCCAGTTT TGCT GAACCGGGGGCG         TTTTGTTTTATTCGC 100 32
        gcvP  831759 ..  831773 +  -2.1  -3.15861   ATGCGTAGTTAATCG               CGATC GTTTA GATTG               TTACTGCCAGTGATA  44 33
LQF52_RS03770  832441 ..  832455 +    -5  -3.10522   ATCAGGAGCTATTCT               TCGATA ATG TGTCGA               TATATTCCATGAGAT  51 100
LQF52_RS03785 NONE
LQF52_RS03790  836381 ..  836436 + -10.5  -3.13565   CTTAAGCCCGTTGTT AGGGGAAAC-ACAGGGG-GAGGT-TCCC GCA GGGATGCCTCACCCCTGTGGTCGCCCCG TGTATCTTGATGCTT  74 75
LQF52_RS03795 NONE
LQF52_RS03800 NONE
LQF52_RS03805  839790 ..  839834 +  -9.9  -3.14344   CGAGACGTGAAATAA GGAAGTCCCGCCCCGTTGA TATTGAC TCAGCGGGGCGGGATCACG TTAATGCGCAGCCTG  72 26
LQF52_RS03830  846415 ..  846441 +  -8.7  -4.00882   CCTCCCTGTACGCTC        GAG-CCGCGACA TCCC TGTCGCGGACGC         TTTACTCTTCTATTC  78 110
        sdhE NONE
LQF52_RS03845  848444 ..  848460 +  -5.8  -2.94679   GGACATGTTTTTATT              CGGTCA TCGTT TGGCCG              TGCTTTGAAATTGAT  51 50
        rlmF  849467 ..  849503 + -16.7  -3.15996   TTCTGCGGATATCAA    TATTCGCGGATGCCGGT CAC AACGGTATCCGCGAATG    TGTTACTCAATGGTA 100 69
        xerD  853931 ..  853945 +  -8.6  -3.73042   GCTTACTATCACAGC               GCATTG GTA CAATGC               TATTTTGCTACGAAC  75 107
        dsbC NONE
        recJ NONE
        prfB NONE
        lysS  859232 ..  859249 + -12.7  -5.90231   GCTGAACCTTTTAAA             CCGGTGC CATT GCACCGG              TTTTTTTATGTTTAT 100 51
LQF52_RS03910  860282 ..  860292 +  -5.4  -4.86033   CTGGAGCTTCGGTCA                 TACG CCC CGTA                 TTTTTATCGCGATTT  76 87
LQF52_RS03915 NONE
LQF52_RS03920  861963 ..  861975 +  -3.3  -2.92668   TATAATGCCACGCGC                CTCTC CGT GCGAG                TGTAGTTCAATGGTA  44 100
LQF52_RS03925  862404 ..  862417 +  -6.7  -5.29716   ATAAAAAGGCATTCA               CCATC ACTG GATGG                TTTTTATTATCTTAC  87 384
LQF52_RS03930  863333 ..  863357 +  -4.2  -5.41143   TACTAAGATTATATT          AAAGGCCGAA TTATT TTCGGCCTGA          TTTTTTTGAGCCATA  83 35
LQF52_RS03940  865230 ..  865260 +  -6.2  -4.77165   TGTTGAGTGAATGCA      GGCGCGTTCAGAG CGGTTA CTCT-AACGCGCG       TTTTCTTATGCCGAA  80 44
        lpxP  867696 ..  867735 + -10.1   -2.5322   AAACTATGTCTGATA  CGT-AGTGCCGCACCG GTTTTCATG CGGTGCGGCGCTGATG  GTGCTTTATTCTTTT  70 44
LQF52_RS03960  870093 ..  870108 +  -2.4  -2.74488   TCTTAAGGAGAAGCT              CGCGTG AAAC CTTGCG               TAATTCAGGTGATTA  40 19
LQF52_RS03965 NONE
        puuE  871833 ..  871852 +  -7.8  -4.51097   TACCAGAAACAAAAA            TGGCTACC GGAT GGCAGCCA             TTTTATGGTGGTTAA  82 51
LQF52_RS03980  874203 ..  874232 + -16.6  -2.78395   TGTAATTCTTCCCAA       CAGACCTTCTGG CATCGT CCAGAAGGTCTG        TCATTCCTCGGGCTT 100 36
LQF52_RS03985  876379 ..  876406 + -14.2  -5.28176   TCTTTTCTTCCTCTG        CATCCCCATGGC GTAA GCGATGGGGATG         TTTTTTATGCGTCCA 100 87
LQF52_RS03990 NONE
LQF52_RS03995 NONE
LQF52_RS04000  878886 ..  878925 +  -4.3  -4.66938   TTTTCGCCATGAATA  TGACGCGCGGTAAGTGGG TTTTC CCTGCTTACCACGA-TCA  TTTTCTCTTGAGCGT  71 48
LQF52_RS04005 NONE
LQF52_RS04010 NONE
        cpaB  880970 ..  880987 +  -6.9  -3.21099   CACGCAATCTGACAG             CCTGCGG GGTG CCGCAAG              TTGCTCATGGAAAAA  59 47
LQF52_RS04020 NONE
LQF52_RS04025 NONE
LQF52_RS04030  884382 ..  884406 +  -2.7  -2.60211   CGCGTTGGTTAAAAC          GCGCGTGATGA TGT TCAGCGTGCAC          CGTTTTTCAAAGGGT  40 18
LQF52_RS04035 NONE
LQF52_RS04040 NONE
LQF52_RS04045  887808 ..  887827 +    -5  -5.42198   CTGGTGCGAGTGATT            CGCCTGCTG GCG CAGTAG-CG            TTTTATTTTTTAACG  87 8
LQF52_RS04050 NONE
LQF52_RS04055 NONE
LQF52_RS04060  890103 ..  890119 +  -4.3  -3.05816   TGTCGTTTTTATTTT              CCCGTTT TAT GGGCGGG              TTGAGTACGCGCTGA  49 152
LQF52_RS04065 NONE
LQF52_RS04070 NONE
LQF52_RS04075  901897 ..  901909 +  -3.3  -3.25088   TGCAATCCCTACAGG                CGGGA GGT TCGCG                TTAATGGCTTTCGGC  46 9
LQF52_RS04080 NONE
LQF52_RS04085 NONE
LQF52_RS04090  906338 ..  906393 +  -9.1  -3.02626   TCCATGTTGGATATT AGGGG-AAACACGGTGATGAGGT-TCCC GTA GGGATACCTCG-CACCGTGGTAGCCCCG TGTATCTCGATATTG  68 208
LQF52_RS04095  908337 ..  908356 +  -4.2  -3.24747   TGTGAGCGGACAAAC            TGTGCATG GAAG CGTGCGCG             TTCCTGCTGTCCGGC  49 154
LQF52_RS04115  913918 ..  913930 +  -6.3   -3.9392   GTTAACTATTTTATT                GCATA TAA TATGC                TTGTTTGAAATAAGC  66 310
LQF52_RS04120  916786 ..  916809 +   -14  -4.70659   TTCTCGACTCTCACT          GAAAGAAGCC CTCG GGCTTCTTTC           TTTTTGCATGTACGC 100 47
LQF52_RS04125 NONE
LQF52_RS04130 NONE
LQF52_RS04135  919596 ..  919624 + -19.7  -2.82193   TTTAATCTCGCATGT        TGGCAGGCGATTG ATG CGATCGCCTGCCA        TATCCTGCCTGTGCT 100 36
LQF52_RS04145  922383 ..  922393 +  -6.8  -4.37886   GCGATTCCAGCATGC                 GCTG GGG CAGC                 TTTTGTGAACCATCC  75 356
LQF52_RS04155  925215 ..  925226 +  -3.6    -3.646   ACGAACGGTTAGCGT                CGGC TGCG GTCG                 TTGTCTGTGCTTCAA  51 106
LQF52_RS04180  932406 ..  932416 +  -4.6  -3.53012   TGAGCAGGTTGCTGA                 CGCT CTC GGCG                 TTTAAAAGAAAAAAC  54 10
LQF52_RS04185  933159 ..  933189 + -14.1  -3.54146   GCATCGTAACGGTGT      GGCTCCTGCCTGCT TGAA GGCAG-CAGGAGCC       TATTTAATTAACGCG 100 32
LQF52_RS04205  936476 ..  936498 +   -15  -3.32521   GACCGCCTGAGATAA           CGAACCGAAT GTC ATTCGGTTCG           TTATAACCATATGAT 100 39
LQF52_RS04230 NONE
LQF52_RS04235  939396 ..  939426 + -15.6   -2.5294   CCTTACAAAAAAACA       CAGGCAAACCTGAA GTG TTCAGATTTGCCTG       CTGTTATACCCGCTA  93 94
        grpE  943450 ..  943470 + -10.4  -5.76237   TAGCTTTATTCCGAA            CCCCGTGC CCACC GCATGGGG            TTTTTTGTTTATATC 100 63
LQF52_RS04260  944887 ..  944906 +  -7.8  -4.33907   TGGGGATATAAGTCT            GATGCCAC CCAA GTGGCACC             TTTTCACTCTTTATC  79 30
        nudK  948574 ..  948604 +  -7.5  -3.79764   GCATAGACATGTTTT       GCGGCACACGGGT ATCCC ATGCATGTGCCGC       TTGATTTTGTGTGGT  68 35
LQF52_RS04285  950226 ..  950248 + -13.5  -3.61232   AGTAGCGAGTGTGAG           CTTGAGGGC GGAAA GCCCTCAAG           TATTTCTCTCCAGAA 100 36
LQF52_RS04290 NONE
LQF52_RS04295 NONE
        ugpC  953174 ..  953202 + -16.1  -4.39329   AACTCAGGGAATTAG        CCAAGCAGCCATT AAT ATTGGCTGCTTGG        TTTCTTATGTGAAAT 100 103
LQF52_RS04305  955319 ..  955332 +  -6.7  -4.21607   ACTTTGATTTGCTTA               GGGAT GGAA ATCCC                TTTCTCTTGAATCGC  70 509
LQF52_RS04360 NONE
LQF52_RS04365 NONE
LQF52_RS04370 NONE
LQF52_RS04375 NONE
LQF52_RS04380  974082 ..  974124 + -15.7  -2.78957   CAACGGTAATGTCCT GCCGCTGTCG-GAGCCAGCCT TTT GGGCTGGCTTACGGCA-CGGC TGCCTTTGTTCGTTT  93 32
LQF52_RS04385  975252 ..  975281 + -11.5  -2.78867   TAACTCACTTTTCTC       CGTTGCGTGGTGT TTTT ACATCACGTGACG        CTTATTGCCCATTCA  77 38
        maeB  977815 ..  977835 + -13.3  -5.76237   AGTCATACAGACAAA            CCCAGCCGA TTG TTGGCTGGG            TTTTTTATTTATCTC 100 50
         mtr  979505 ..  979533 +  -3.8  -4.04206   GAACTGCTGACGGTC        CCGCTGGTTTAA TGCGC TTGGGCCACCGG        TTTGTATCCCGCTGG  58 270
LQF52_RS04410  981512 ..  981531 +  -6.4  -5.37593   CCCTCTTAGTAAAAA            GTGCGC CTCTGTTA GCGCAC             TTTTTTCATTTAACC  91 97
LQF52_RS04415 NONE
LQF52_RS04420  985434 ..  985470 + -26.8  -4.35926   ACCTGGTAAATCCTA    TGCCCCGCCTACGTCA CAGCC TGACGTAGGCGGGGCA    TTTTGCATTTCGCAT 100 32
LQF52_RS04425 NONE
LQF52_RS04430  989988 ..  990020 + -16.3  -3.46178   CGCAGTTGATGTTGT      TCGCAGGCCTTCCGG CTC TCGGGAGGTCTGCGG      TTCTGGTAGGTTTCT 100 32
LQF52_RS04435  990830 ..  990865 +  -6.8  -4.13963   CACGCAAGGTAAAAG    TCAGGCGGCTTCCGGTA TGA TAGCTGC-GCCGCCTGA    TATTTTTTCGGCGGT  70 75
LQF52_RS04440  991866 ..  991891 + -16.3  -2.71708   TCTTACTTGTTTTCC         TGATGCCTGCA CCTG TGCAGGCATCA          ATTCTCTCCACTTTC 100 43
LQF52_RS04445  993167 ..  993190 +    -6  -2.65354   GGTGAACTGGATAAA          TTGCTGGCGG CTGG TCGTCAGTAA           TGCCTTTGGGATCGG  53 2
        cysT NONE
        cysW  994948 ..  994960 +  -7.7  -3.04398   AGTAAATTGAGATTG                CTGAC AAA GTCAG                ATTTTAGGGAAACAC  62 36
        cysM  996410 ..  996422 +  -5.5  -3.17051   TTCTCGATCATCTGA                CGGAT GCT GTCCG                TGTTCATGATAAAGA  52 444
LQF52_RS04475 NONE
LQF52_RS04480 1001582 .. 1001600 + -11.7  -3.72893   AGCCTGAAACGAAAA             CGGCACC ATCCG GGTGCCG             TTTCGTGCAAACGTA  93 34
        zipA 1008014 .. 1008031 +  -9.1  -5.95946   CAGTGGGTGAGAGAA             GCCTCCG TTAG TGGAGGC              TTTTTTTATTCTTCG 100 77
        yjeH 1009424 .. 1009439 + -10.4  -3.49653   TGGGGAATTGAGCAA              CGCCCT GATT AGGGCG               TTGTATCGCGATGAT  77 104
        ribB 1010933 .. 1010960 + -12.8  -3.95858   AGCGTATAGAGAAAT        AAAAAGGGCCGA GTAA TCGGCCCTTTTG         TATTTTATGTCTTAT 100 48
        norR 1016572 .. 1016594 + -10.5  -3.37796   GCATCAAATAAAAAA           CGCCCCGAC GAATG GTCAGGGCG           TTGTAGGTCGTAGAC  76 30
LQF52_RS04555 1019171 .. 1019187 +  -5.8   -3.9777   ACGATCCCTTCCGGT              TGCAGC CGGTC GCTGCG              TTTATAGGTATTGAG  65 287
LQF52_RS04565 1020538 .. 1020586 +  -2.3  -2.78438   AATACCAGGATGCCA CCGTGCGATAAGGCTGACATTG CAGGCT CAGTGCCTGCAA-ATCGCGCGG CTTTGGCATGTCCTG  39 120
         ada NONE
        alkB 1024152 .. 1024177 +   -12  -3.16068   GATAAGAGGAATGAG         CAGCCTGTAT GGATCA ATACAGGCTG          GTTTTGGGTTGGACG  83 36
LQF52_RS04620 1031950 .. 1031966 +  -4.3  -5.44837   CTGAACGTTTTTTTA              GTCACTC AAT GAGAGGC              TTTTTGTGTTTTTTT  84 101
LQF52_RS04635 NONE
LQF52_RS04640 1036787 .. 1036813 +  -8.7  -2.52464   TTTCTCTCTTAATCA         CTCCAGATCGT CAATA ACGGACTGGAG         TGGATTGCGACACCA  63 122
LQF52_RS04645 1038275 .. 1038317 + -15.9  -3.53012   CGTTCAGATTGTCAT TG-TTCGAGTTGCAGATGAG TTGA CTTGTCTGCAACTCGAATCA TTTAGGGCGCAGACA 100 41
LQF52_RS04650 1039972 .. 1039985 +  -3.8  -2.94218   TGTAACACTGACACT               CGCT GCGCTA AGCG                TGTATCATAAGCGGT  46 168
LQF52_RS04655 1040740 .. 1040766 + -13.1  -3.53224   GAGTGCGTTGAACAG        TGGCTTCC-CCG TCTC CGGTGGAAGCCA         TTTCACAGAAAACTA 100 53
LQF52_RS04685 1049754 .. 1049764 +  -3.2  -2.88776   TCAGAAGTCCCGCTA                 TGGT AGT GCCA                 GTTTCGTCACTTTCA  44 77
LQF52_RS04690 NONE
LQF52_RS04695 1052075 .. 1052087 +  -2.7  -4.20696   CATCAGTTAACCGAG                GATAT ACC ATGTC                TTTTAGAGTTACTCG  58 226
        fhuE 1054352 .. 1054378 + -19.5  -4.36914   TTAAATAAAACATCA         TCCCCCGCCGA CAGCA TCGGCGGGGGA         TTTTCTCAACGAACC 100 81
LQF52_RS04715 1058431 .. 1058452 +  -6.5  -4.18762   TAATCGTGAAGTCAT           GCCAGTCAC CGTA GCGATTGGC            TTTTAAATAGCGGTT  70 352
LQF52_RS04745 NONE
LQF52_RS04750 1065719 .. 1065733 +  -4.2  -2.64155   CATTAATCGCAATTC               TGGGCG TGC TGCTCA               TACGTTTCACAACAC  44 64
LQF52_RS04760 1067332 .. 1067363 + -16.1   -3.1855   AAGTTCCCCGTTGAA      TAAGAAACCCAGC GATATA GCTGGGTTTCTTA       TTCCGTGTTCGCGAC 100 59
LQF52_RS04780 1070174 .. 1070184 +  -2.4  -3.92075   CAGAATGGGGCAAAG                 AGCC CGC GGCA                 TTTCTCCGTGAAGAT  54 326
LQF52_RS04790 1071379 .. 1071426 +  -5.7  -2.89632   GCTTTAACCCCTTAT TTCTTCTGGCCGGATGGTAGAT GGCTG AT-TACCGTTCGGCCAAACGGA TGATATGTTTTTAGC  51 104
LQF52_RS04795 1072820 .. 1072830 +  -5.4  -4.09243   AAATTCATACTCTCA                 CATC GAT GATG                 TTTTAAGGCCATGTA  65 275
LQF52_RS04805 1074888 .. 1074923 + -17.6  -4.77165   GTTCGGTTTCCCATG    CTGGATGCCACACCCG CGCT CGGGTGTGGCATGCCG     TTTTATTGTGCGCGA 100 55
LQF52_RS04815 1077250 .. 1077276 +   -11  -4.24404   AATACAGAATGAAGA         GCATAACGAC TGATGGC GTCGTTATGC         TTTTGCCGTTTACAT  88 87
LQF52_RS04820 1078208 .. 1078232 +  -5.8  -4.61231   CATGCGCAGAGCCTT         GTTGATG-GTG TTTT CACTCATCAGC          TTTTTCAGCGTATGC  74 298
LQF52_RS04855 1082079 .. 1082094 + -10.4  -4.50761   CCCAAAAGCAAAAAA              CCAGCC GTTA GGCTGG               TTTCTTTAAATTAGT  89 80
LQF52_RS22190 1082612 .. 1082633 +  -6.5   -3.3782   CCCCGTCGATTATCC           CCCTTCACC ATGC GGTGAGGCG            TTCGTTCGCTCACTG  59 8
LQF52_RS04865 1085040 .. 1085063 + -18.2  -5.26316   CGGTAAGCCAAGAAA          CGCAGGCTCG GAAA CGAGCCTGCG           TTTTTTCTGCCCTAA 100 51
LQF52_RS04885 NONE
LQF52_RS04890 1090810 .. 1090835 + -13.3  -5.39721   CGCCAATATCAGGGA         ATACGGCCAGC ACAT GCTGGCCGTAG          TTTTTTGTGTCCTAA 100 104
LQF52_RS04895 1092127 .. 1092151 +   -10  -3.21806   CGTGCATCCGTTTGG          CTGAGGAGGC GTTTA GCCTCCTCAA          TTCGGTATTCGTTCA  68 163
        trmB NONE
LQF52_RS04925 1096882 .. 1096907 + -11.9  -3.31792   GGTCTTATCAAGGCA         TGCCTGAGCTG ATCC TAGCTCAGGCG          TTATCCGCCTCATCA  85 46
LQF52_RS04930 1097723 .. 1097744 + -10.2  -4.61566   GATAAAGAAAGAAAA           CCGAGCAT CAAGTA ATGCTCGG            TTTTGTCGTTTACGG  91 59
        rppH NONE
        ptsP 1104573 .. 1104589 +  -2.2  -3.15544   GATTGGGCGGCTTGA              TTCGCG GTGGG CGCTAA              TTCGTCGCGGTGCGA  44 9
         lgt NONE
        thyA 1106534 .. 1106550 + -15.1  -6.04953   TCCCATGTTTTTCAG              GGCCGCG TAA CGCGGCC              TTTTTTTATTTCTCT 100 46
LQF52_RS04985 NONE
LQF52_RS04990 NONE
LQF52_RS04995 NONE
LQF52_RS05000 NONE
        recC NONE
        ptrA NONE
        recB NONE
        recD 1121508 .. 1121536 +  -4.6   -2.8733   AAAAACCGATATCCA       TGATGGGGGAGGG CACG CTTTTCCCC-TCA        ATCTTTTCTGCCAGC  46 79
LQF52_RS05030 1124299 .. 1124317 +    -3   -3.5627   CTGCGGTAATCCGGG             TGAACTGC GAC GCAGGCCA             TTTCACCAATGCTCT  49 312
        amiC 1127028 .. 1127057 +    -5  -4.46404   AGGTGACGCAGAAAA       CAAAAAAGCACC CGTTAA GGTGCTTTATCG        TTTTAGTCTTAGTTG  71 129
        mltA 1129190 .. 1129204 +  -7.8  -3.14468   CTGGGGCAATATTGC               CGGTCA TGT TGGCCG               TTCCATGTCCTCCCA  57 395
LQF52_RS05100 NONE
        tcdA 1140895 .. 1140905 +  -4.6  -4.65895   ATCGTGCTGCAATAG                 CGCT TCT GGCG                 TTTTTCCCTCAACGG  71 179
LQF52_RS05120 1143266 .. 1143285 +  -2.8  -3.89614   CAGCGGAGCGACTGG            GGCGAT TTCCGATT GTCGCC             TTTCTGCACCTTAAG  54 465
LQF52_RS05125 NONE
LQF52_RS05130 NONE
        rlmM 1145887 .. 1145920 + -12.5  -4.07877   GCGGTAGTATCGTGC     TGATGCGTATCTGGG GTCA CTCAGGTACGCATCC      TTATTTATCCGCTAG 100 34
         syd 1150162 .. 1150182 +  -9.8   -3.2794   ACTTAAGTTAGTAAC            CGGTTACA GTGTG TGTAACCG            TTACTATGGGTAACA  74 252
LQF52_RS05160 1152556 .. 1152584 +  -4.6  -2.54896   TCGTACCCAATATCG        TTCGGCTGCA CGAAAAGGT TGCAACCGAA        TGACTTCCCTGGAAG  46 47
LQF52_RS05165 1153261 .. 1153276 +  -2.5  -2.56728   GGAGTTGTCTTTTCA              CTGGC GATTGG GTCAG               GTTGATATCAGTGCT  40 42
LQF52_RS05170 NONE
        truC 1154458 .. 1154487 +    -3  -3.47012   TAGCGAGCATTTCGT       CGAGCAGTAAT CTCTGTCTT ATTACTGC-CG       TATTACTTTTATATC  48 16
LQF52_RS05180 1155011 .. 1155031 +  -9.7  -4.55128   TGCTGAAATGACAAA            CGGGAGC CTGTCGT GCTCCCG            TTTTCGTTTGCGGCT  89 46
        rpsB 1161208 .. 1161226 + -10.2  -4.87318   GTACTAGTTTGGTTA             GGGGCCTT TTT ATGGCCCC             TTTTTCACTTTTAAA  91 76
         tsf 1162155 .. 1162176 +  -7.9  -4.82901   TTAATAGCAAAAAAA           AGAGCCGCC AGTT GGCGGTTCC            TTTTTATCCAGCCCA  86 37
        pyrH 1163076 .. 1163092 +  -9.4  -2.71745   AGTATTGCTCTATAC              GCCAGC CGCGC GCTGGC              ATTAATTATTCACCG  69 77
         frr 1163735 .. 1163779 +  -4.8  -4.82863   AGCCTGTTAAATAGT GCGTCGCAGGGAATCTGTGGG CTTG CCCTCTT-TTTCCGGCGGCGC TTTATTTTATGGTTA  75 43
        ispC 1165265 .. 1165282 + -11.3  -5.44119   CGACCGTGAGGCTAA             GCCGTGA TCGT TCACGGC              TTTTTTTGCGCTAAC 100 132
        ispU NONE
        cdsA NONE
        rseP 1168349 .. 1168370 +  -4.3  -3.17075   CACTTTTCAATGATT           TCTCTCGTC TCTA GGCGCGGGA            TTAGGTTAGGAAAAA  50 12
        bamA 1170946 .. 1170970 +  -6.5  -2.80113   AATAGTTCATGGACA          TGAATGGTTGA ACA TAAACCGTTCA          TGTCATGACGTGATG  53 129
         skp NONE
        lpxD 1172626 .. 1172638 +  -2.7  -5.24129   GCGCAGGCCGTGTTG                TTGAT GGC ATCAG                TTTTTTATGGACAGG  76 91
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB 1175715 .. 1175726 +  -5.8  -2.74012   TCGGTATGGCGTGCG                CACG TAAG CGTG                 TCGTTGCCATGCTGA  50 57
        dnaE NONE
        accA 1180283 .. 1180306 +   -14  -5.21709   GCGTTACTTTGAAAA          TCCGTTGTCA GAAA TGACAACGGA           TTTTTTGCTATGAGG 100 85
LQF52_RS05290 NONE
        tilS 1182101 .. 1182120 + -12.2  -4.09739   GCGCTGAAATAAAAA            CGGACAAC CTGT GTTGTCCG             TTTTGGAAGCATTGA  93 82
LQF52_RS05310 NONE
        nlpE 1184205 .. 1184223 + -13.2  -5.09895   GCGTAAAAAAGAGAA             GGCACTGA TTT TCAGTGCC             TTTTTTGCATCCATC 100 45
LQF52_RS05325 NONE
LQF52_RS05330 1188943 .. 1188957 +  -8.6  -3.70722   AAAGAGACACTTTCG               TGAGGT TGG ACCTCA               TTATGTGTTAATGAA  68 149
LQF52_RS05340 1189718 .. 1189734 + -12.3  -3.52689   TTCTCTTTAGTCTAA              TGGGCTG GAT CAGCCCA              TCTTAATTTTTCTCT  93 31
LQF52_RS05395 1201459 .. 1201473 +  -2.2  -3.92377   AATATGGTAGTTACC               TAATGA TAT TTATTA               CTTTTTTATTGTGAA  53 99
LQF52_RS05400 1201862 .. 1201898 +  -7.2  -5.07567   ATTCGGATGTGATAA   CGC-GCGCGCCGGTC TTCTATTT GGTCGGCGCGCTGCA    TTTTTTCACCTCTGG  86 40
        mltB 1203085 .. 1203124 + -12.4  -3.73224   AAGCTTTTCCCTAGG  CTGTCTCTTCGTC-ATATT TTC AATGTAGACGCAGAGACAG  TTTCGTGCGCCATAA 100 39
LQF52_RS05410 1204272 .. 1204288 +  -2.1  -3.80945   ACATGGCTGCACGCG              GGCTGCT TTA AGCCGCA              TTCTCTTCTGTAATA  51 15
LQF52_RS05445 1210420 .. 1210432 +  -3.3  -3.75461   GTCCGTTCCTTCGCG                TCTGG AAT CCTGA                TTTCCTCGACGTTTC  53 13
        uxuA 1211927 .. 1211948 + -14.5  -3.04461   TGATGAAATGAAACA           GACCGTGCT TGAT AGCACGGTC            TGTTGAAGATGGATG  89 38
LQF52_RS05460 1214872 .. 1214908 +   -18  -4.11235   AAAATCGTTCTGTTA    TGACAGCGCCGCACGG TTATC CCGTGCGGCGCTGCTG    TTTGTGTACTCGTTG 100 50
LQF52_RS05490 1236942 .. 1236970 +  -2.6  -3.14982   GGGGCATTATAAGCG       CCAAT--GTTGGCA GGC TGCTAACAGATTGG       GTGTTTTTTACTTAC  45 131
LQF52_RS05495 1238119 .. 1238140 + -11.5  -5.35815   GTTTTTAGTGTGGTA           GCCCCGCCT TTAA ACGCGGGGC            TTTTTATTTCCTGTC 100 52
        aroL NONE
        ppnP 1239353 .. 1239381 + -18.3  -5.67967   AGAGTAGATCATTCT        CGCCGCATTGTGT GCT ACATAATGCGGCG        TTTTTTTATGCTCAT 100 59
LQF52_RS05510 NONE
LQF52_RS05515 NONE
LQF52_RS05520 1242870 .. 1242920 +  -7.5  -4.31433   GATGCTGTACTCAAT GGGCCGGTTCTGTGGATCGAGCG CAATC TGCTTGATGACCAGAACCGGTAC TTTATTATCAAGCTG  77 59
LQF52_RS05530 1245901 .. 1245939 +  -9.7  -2.53263   GGTTCCGGCAGTGAA  G-CAGT-ATTGCCCGCCGA ATA TTGGCGGGCAATCACCGAC  TGCATTAACAATCGG  68 43
         mak 1248491 .. 1248502 +  -3.6  -3.84719   CACCAGCAGCTCCAG                CTCG TCGC CGGG                 TTTCCGTTTCAGCAT  56 380
        phoB NONE
        phoR NONE
LQF52_RS05565 1256361 .. 1256399 +  -9.1  -3.73336   CACTAATTTGCGATG   TTTTCATGCTAGATGAA CTTTC TTCATGTGGCGTGAAAA   TTCTTCCATTGCCCT  77 52
LQF52_RS05570 1257722 .. 1257743 + -12.3  -5.24531   CAACAGATATACAGA           GGCTGGATC ATAC GATCCGGCC            TTTTTTGTGGCCGCT 100 66
        brnQ 1259552 .. 1259571 +   -10  -5.69262   CGTTGGGTTTCTGCA            CCACAGGT TTTT GCCTGTGG             TTTTTCTTTTTGTAA 100 98
        proY 1261195 .. 1261210 + -10.4  -5.65177   TGTTTGCAACCTCAA              CGCTCC CATT GGAGCG               TTTTTTTGTGCCTAT 100 223
        queA 1265483 .. 1265497 +  -4.9  -3.93695   GCCGAACAGGAAAAC               GTGGG ATAAA CCCGC               TTTCTACATAATACG  61 17
         tgt 1266808 .. 1266818 +    -4  -4.77759   TACGATTATAAGGTT                 GATA ACT TATC                 TTTTTGATAGCTTAT  71 100
        yajC 1267171 .. 1267187 +  -2.2  -3.02613   TGCCGTGCTGCCGAA              GGGC ACGATTAAG GCCC              TGTAATTTCCGATTT  42 4
        secD 1269115 .. 1269135 +    -4  -3.74693   CATTGAACAACTCAA            TCATGGGC GTAAA GTCTATGA            TTTCATGCGCTGGGA  55 73
        secF 1270076 .. 1270090 + -12.8   -5.1615   TGTAAACATAAAAAA               CCCCGC ATT GCGGGG               TTTTTTGCATCTTAG 100 50
        nrdR NONE
        ribD NONE
        ribE NONE
        nusB 1273570 .. 1273602 + -14.2  -4.21194   AAGAAGTAAAATGAA     TCGAATCAGGGCCGG ATAT CCGGCCCTGAT-CGC      TTTTGAATGATAGGC 100 32
        thiL NONE
        pgpA 1275159 .. 1275177 + -13.1  -3.54297   ACTGATATTATTGAA             CCGGGGC CATGT GCCCCGG             TTATCGTTAGTCGCT 100 61
        thiI 1279941 .. 1279954 +  -9.5  -4.76644   GTCCGTAATGAGAAA               GGCGC GTAA GCGCC                TTTTTCGTCAGTCTT  91 33
LQF52_RS05690 1282137 .. 1282174 + -20.9  -2.72471   TTAGTCAGCCGCCGA   TGAATAGAAAGGCCAGC GTAA GCTGGCCTTTCTATTTA    GTTCTGTCCTACCAG 100 46
        bolA 1291713 .. 1291737 +  -8.6  -3.14344   AAGTCATTAATATGG         CCCGTTCCTGA CATA TCGGGA-CGGG          TTACTAACAAAAGTG  67 39
         tig 1293374 .. 1293395 + -15.1  -4.93365   GCTTCCCTATCAAAA           GCCCGTGCC TTAT GGCGCGGGC            TTTTTGCTTGTAGCG 100 81
        clpP 1294586 .. 1294599 +  -4.5  -2.73364   TATCGGCGTTCGTTG               TAGCG GTAT CGCTG                TGGTTGGCCTGCGGG  47 134
        clpX 1295948 .. 1295965 + -11.3  -5.04249   ATCAAAAAATAAAAA             TGGGGGA TTTA TCCCCCA              TTTGTTTTTTACACG 100 58
         lon 1298522 .. 1298549 +  -4.1  -5.93809   CTTGAGAAAATCAGG        GCTGGTGAGTG AAATCG TGCTTGCCAGC         TTTTTTTTGTACCGC 100 59
        hupB 1299042 .. 1299064 + -12.8  -5.05113   TAGGGTAAGATACGA           GGCGCATCAT TTT ATGATGTGCC           TTTTATTTATATAGA 100 109
        ppiD 1301272 .. 1301287 + -11.8  -4.17089   GTTGCAACAACAAAA              GGCCGC TTTC GCGGCC               TTTTCCACATTTAAA  95 63
LQF52_RS05770 1301809 .. 1301819 +  -6.8  -4.37092   AATTATCAGGTCATA                 CCAG TTA CTGG                 TTTTGTCACAGGAGT  74 96
LQF52_RS05775 1302253 .. 1302279 +  -7.3  -5.65513   GTTAACATGAAACAA        CAGGCCATTGCT GCAC GGCG-TGGCCTG         TTTTTTTACTTAGTG 100 36
LQF52_RS05790 1304999 .. 1305009 +  -2.4  -3.41414   GAATCAAACATACCA                 CGGC ATT GCCC                 TTATCCCTGTGATTT  45 3
LQF52_RS05795 NONE
LQF52_RS05800 1308660 .. 1308696 +  -8.1  -2.83641   TACCTGAGATAGTAT   C-G-CGGTCTGCACCGC CTTGT GTGGTGCAGACTGACAG   TCTAGTCATGGCTTC  60 45
        glnK NONE
        amtB 1310707 .. 1310732 + -19.1  -4.79955   CTTAATACAATTAGA         CAGGCGTGGAG GAGA CTCCACGCCTG          TTTTATTATCAGTCT 100 68
LQF52_RS05820 1312471 .. 1312487 + -11.5  -3.02263   TAACTCATCTGGATA              CGCGCCG CTA TGGCGCG              TATTGCCAGCGATAT  79 38
         ffs 1313341 .. 1313351 +    -4  -3.30243   ATTAGTGGATGCTAT                 CAAT GCG ATTG                 TTATAAACGATGAGT  50 286
        acrR 1320955 .. 1320973 +  -3.8   -4.1523   TGTTCGCTGAATTGC             GTCTGC GTGATGA GCAGGC             TTTCTCTATCCTGAA  60 413
LQF52_RS05880 1322091 .. 1322104 +  -3.1  -4.05181   ATTTGACCGTTTTCG               TGCGCG GGT CGC-CA               TTTCCTCTTTGTCAT  57 125
         apt 1322768 .. 1322793 + -12.5  -3.07043   GGACATTAATCATAA         CAGTCTCGCCG ATAG CGGCGTGGCTG          TGTTAGCATGATCGC  83 32
        dnaX NONE
LQF52_RS05895 1325249 .. 1325262 +  -2.3  -2.64099   ATGCAATTGCCGCCG               GGCTT CAAG ATGCC                GTTCTGATGCAGACC  39 5
        recR 1325876 .. 1325911 + -13.5  -3.14195   CTTTCCGGTTTTAAT   CTGTCGGCTGCCAGCAT CATT AT-CTGGCAGCCG-CAG    TCTCGTTTTCCTCTT  93 27
        htpG 1328196 .. 1328208 +  -7.7  -3.84406   CATAGCAAGGGGATT                TACGC GAT GCGTA                TTATTCTGCTGGGCG  71 283
         adk 1328880 .. 1328899 + -12.2  -5.32944   ACCCGAACACCTGAA            TGCCAGAC GACC GTCTGGCA             TTTTTTCGTTCTGAA 100 59
        hemH 1330216 .. 1330239 +  -8.1   -4.4261   ACAACGTAAAAAAAA          TGGCAGGCA TTTATT TGCCCGCCA           TTTTCGTATTCAGCG  79 85
        ushA 1334290 .. 1334328 + -11.2  -5.30686   AGTAACAAATAGTGA  TGGCGGTTTTTGTC-TC TTCACT GATGACATAAACCGCCA   TTTTTTCTGGGTGTT 100 48
LQF52_RS05930 1336559 .. 1336575 + -10.8  -5.56673   TTACTGATTCCAATG              GCCGCG TATAT CGCGGC              TTTTTTATTCTGAAT 100 53
LQF52_RS05935 1338801 .. 1338825 + -13.7  -5.67967   GTACTTGTGTAACAA          TCCGTAATCTC ACA GGGATTACGGA          TTTTTTTATGCTACT 100 117
LQF52_RS05940 1340163 .. 1340175 +  -6.2  -2.88613   AACTGAAAAGCATTA                CGCG TATAT CGCG                GCTTTTTTCTAATTT  55 39
LQF52_RS05945 1341523 .. 1341539 +  -2.3  -3.64184   ACAGAGCATGAAGCA              GTAAGTT ATT AAATTAC              TTTAAAATAGTGTTT  49 48
LQF52_RS05950 NONE
LQF52_RS05955 NONE
LQF52_RS05960 1344080 .. 1344112 + -16.4   -2.5655   TGTAATTTATCTCGC      CTGATGTGCCGCAT TTATC GTGCGGCGCATCAG      ATTAGTGTGCGTACA 100 81
LQF52_RS05970 1346929 .. 1346961 + -17.3  -5.36441   GATGACGGGTACAGA      TACCCTGTATAATGT ATA ACGTTATACAGGGTA      TTTTTTATCTAGCCG 100 94
LQF52_RS05975 NONE
        yjiA 1348227 .. 1348254 +  -8.5  -3.67296   ACGCCATTTATCTTC        TCTGTGCTGGTC ACTCA GGCCAGCAC-GA        TTTCCCTCGGTCCTA  72 40
LQF52_RS05985 1350009 .. 1350061 + -11.5  -2.87527   AGTATGACGAGTATA TGAAGC-GGTAGCAGGGGAC-ACAC TGGCC GTGGAGTCCTCTGCTATCTGCTTCG CTTTGATACTACATC  78 158
LQF52_RS06000 1351824 .. 1351844 + -16.9  -4.07885   ATCCATCAAAAAAAT            GGCGGGGAT TTG ATCCCCGCC            TTTTCGGAGGCAATA 100 13
LQF52_RS06005 1352347 .. 1352383 + -18.1   -2.5619   TGGTTTTCGGCAAAG    GAAAACGCGGCGCGT CTCAACA ACGCGCCGCGTTTGC    ATTACTGGCTTTTAG 100 82
        cueR 1355824 .. 1355856 +  -5.3  -3.61715   GAAACCGTTGATCAC      CGGGTCGGTCAGCGT AGT GCGCAGTCCAACCAG      TTGTTGCCCGCGCTG  58 223
        gyrA 1364998 .. 1365016 +   -16    -5.626   GAATGAGCAGAGTAA             GCCAGCGC GAT GCGCTGGC             TTTTTTTATCGACTC 100 58
        rcsC 1368053 .. 1368064 +  -4.4  -3.82824   TCGACGCCCAGCTTG                GTCA TGGC TGAC                 TTCTTCTGGCTACTG  58 142
        menF 1374363 .. 1374374 +  -4.4  -3.05935   AACGGATATAACCTG                CAAC CTGA GTTG                 TTGAGTACAACATGT  49 220
        menD 1376043 .. 1376070 +  -2.6  -3.53012   TCAATGAACTGGTCG        CTCAGGTGGCGAC GTG GGCGC-ACTAGAG        TTTCAGAGGCCAAGC  48 0
        menH NONE
        menB NONE
        menC NONE
        menE 1380168 .. 1380187 +   -10  -3.70076   GTCGTAGGTTAGTTG            TCCGGTAC GCTG GTGCCGGA             TTTCGCTACCTTTCG  78 34
LQF52_RS06110 1381224 .. 1381248 + -10.8  -5.60993   AGTGGAAACAAAAAA          GAGCGTGAAT GCTGA GTTCACGCTC          TTTTTTTATGACGGA 100 88
LQF52_RS06120 1384178 .. 1384208 + -17.6  -3.54543   CCTGCTTGTCGAGCC       GCCAGTGACGCGTT CCC GACGCGGCACTGGC       TTTCGCGGCGTCCAT 100 239
LQF52_RS06140 1387480 .. 1387493 +  -3.8  -2.63102   TAGTCGACGGCAAGC               TGCG GGAGGA CGCA                TGATCTGGCGATGGT  44 9
LQF52_RS06145 1389986 .. 1390007 +  -6.5  -3.86194   ATACAGAGAAAGTTT           CGTGCGCAGC AGC GCCGC-CACG           TTTATGCAAAACCTT  66 89
         upp 1397121 .. 1397138 + -11.3  -5.75342   CGAAATAACAGGTAA             GCCGACT TGAT AGTCGGC              TTTTTTTTGGCGCAA 100 33
        uraA 1398647 .. 1398685 + -15.3  -2.74244   ATAGCCGCATCATTC   CCCCTGTTGAGGCCGTG CGTAT CGCGTCCTCAACAGGGC   TCGGTTTCTGTGATA  93 37
         hda 1399893 .. 1399904 +  -4.4  -3.99324   GTGTCATCGTCATGC                TCCT TATC AGGA                 TTTCTGGTACTGGCG  59 477
        dapA 1403767 .. 1403780 +  -3.1  -2.86164   GGGGCAAGCACTTAA               GCAAG CGGG TTTGC                TGTAATCGTTAGGGA  44 7
        bamC 1404852 .. 1404870 + -12.4  -3.81146   TAACGCATAAACCAA             GGGTCGGA TTA TCCGGCCC             TTCTTCATTCAACAA 100 38
LQF52_RS06220 1405714 .. 1405750 +  -8.7  -3.76611   GCGCAATCGTTTACG    TTCAGGTCGCCGGCT GGCGATA GGCTGACGGCCTGAA    TCTTTTACCTATTTT  75 43
LQF52_RS06225 NONE
LQF52_RS06230 1408614 .. 1408630 +  -2.9  -3.34517   CCTCTCTCCAGACCA              GAGCTGA CAC TCGACTC              TCTTTCGCGGAGCAT  47 199
LQF52_RS06270 1417080 .. 1417092 +  -5.5  -2.57988   AAGGGCGGACGTGGC                GTCTC ACC GGGAC                ATATTCGTTCTGATC  50 0
LQF52_RS06275 NONE
LQF52_RS06280 1421761 .. 1421794 + -15.4  -3.85698   CGACTATTTTTTAAT     GT-TGACGCCGACGG AGATA CCGTCGGCGTCATGC     TTTATCAGAAGGAAA 100 90
LQF52_RS06290 1425208 .. 1425232 +   -10  -2.90075   TTATCAAACCGCATT          GACAGGGAGG GCGAG CATCCCTGTC          TGTCGTTGCAAAAAA  72 24
        ypfH 1426288 .. 1426303 +  -2.6  -4.50902   TAATGTTTTTATTTG              TGTTGA GTGT TCAATA               TTTATCTTATTTTTT  63 323
LQF52_RS06300 1428090 .. 1428122 +   -12  -3.58343   TAAGAATCAAACCGC     CCGCC-GCGCG-GGGC TTA GCTCGCGTGCAGGCGG     TTTGGCGATGATAGA  89 84
        cspE 1434426 .. 1434440 + -12.8  -5.95166   CGATTTCGTGAAAAA               CCCGCC TAT GGCGGG               TTTTTTTTGCTTCAA 100 47
        tatA 1435794 .. 1435813 +   -15   -5.4505   TCTCACACAGCAAAA            CGGACGGC AATA GCCGTCCG             TTTTTTATTCCACAC 100 46
LQF52_RS06420 1450496 .. 1450513 + -12.7  -4.08939   GTTGGGGATAAATAA             GCGTGCC TTGC GGCACGC              TTTATCTGAGTATTA 100 45
        ubiF 1461890 .. 1461902 +  -3.3  -3.60805   AGATTGGCATTCATC                CGGTC AGC GAACG                TTTGCGATGACATCT  49 451
        nagE 1470148 .. 1470169 + -14.5  -6.25242   TCGATGAAAGCGGTG           GGGCGAGAT AGCA ATCTCGCCC            TTTTTTTTTCGTTAT 100 90
        glnS 1471957 .. 1471978 + -11.7    -5.626   GTAAGAAGACAAAAA           TAAAACCGC CTTG GCGGTTTTA            TTTTTTTATGCGGTC 100 49
LQF52_RS06550 1476210 .. 1476258 +    -3  -4.67697   GGGTTGGTCTTGGGG CGGCCCGGACGACGCTCG-TCTG CGAA CAGATCCAGTGTGGTGCGATCCG TTTGTTCTTTTGCCA  67 375
        seqA NONE
         pgm 1480119 .. 1480132 +  -5.3  -3.25823   CCCTAAAAGGGTGAA               TCTCA TGGA TGAGA                TTCATATCCGCGCAA  52 183
LQF52_RS06610 1489604 .. 1489636 + -14.9  -5.26119   TTCAACAGCACTGAT      TAAGCGCCATTTCCG CTA CGGATCTGGCGCTTA      TTTTGTTTTTAGCGC 100 166
LQF52_RS06630 1494462 .. 1494475 +  -2.4  -2.64616   CCGCCCGAGGAATGT               CATG ATCACC CATG                TAGTCTGGCTACGCA  39 46
        phrB NONE
LQF52_RS06640 1496718 .. 1496730 +  -3.3   -3.1855   ACATTTTTGATATTG                GCATC GTT GTTGC                TTAGCTGTTGAGAAG  46 78
        pxpB NONE
LQF52_RS06650 NONE
        pxpA NONE
         pcp 1499812 .. 1499825 +  -3.1  -3.14344   GTGACTGGCGGCGCC               CTACA TTAG TGTGG                TTAATCGCGAAAATA  46 17
         nei NONE
LQF52_RS06670 NONE
LQF52_RS06675 1501729 .. 1501749 + -13.3   -4.7173   AGGGTCAAAAACAAA            GGCCGGATG TGA TATCCGGCC            TTTTTGCATGTACTG 100 85
        sdhC NONE
        sdhD NONE
        sdhA NONE
LQF52_RS06700 1507057 .. 1507098 + -13.4  -3.33815   AGGGAGCGCAGGAAA CCTTTAAAAACCGGCTTACG CGCC CG-AA-CCGGTTTTTAAAGG TTCCTTAGGGGGGAT  95 123
        sucA NONE
        odhB 1511357 .. 1511375 +  -7.4   -2.5937   TTATGTGCTATGCAG             GCCGCT TTTTCTC AGCGGC             GTTATCCAAATATAT  57 98
        sucC 1512639 .. 1512653 +  -2.1  -2.72096   TGTTGCAGCAGTGGG               GGATA AATAA TGTCC               ATTCTGATTAATAAA  40 16
        sucD 1513545 .. 1513560 + -10.4  -5.80364   CGATTAAATATACCA              GCCACC TTCG GGTGGC               TTTTTTTATTCCAAT 100 50
LQF52_RS06725 1515175 .. 1515194 +  -2.1  -2.78715   ATTAAACCTAAAAGT            CACATTG CATTAA CAATGAG             TGTAATAAGGAAATT  40 283
        cydA NONE
        cydB 1518365 .. 1518375 +    -4  -3.08034   ACTCTATGTACTAAG                 TAAG GAG CTTA                 ATTTATGTGGTATTT  47 27
        cydX NONE
        ybgE 1518806 .. 1518835 + -10.9  -4.94962   GCCTCCTATTCCATT       TAGTTATGGGTTG CTTG CAGCCCATAATTA        TTTTCTTTCCATTGT 100 45
        ybgC 1519312 .. 1519335 +  -4.6  -3.64086   GTCTATTGTCGCGGA          GTTCAAG-CAG TGA CTGACATGAAC          GTTTTTGATTTGTTC  55 13
        tolQ NONE
        tolR NONE
        tolA 1521768 .. 1521778 +  -2.6  -3.50995   TTGACATTGGTTTGT                 TTTT GTT AAAA                 TTCTGCTAATTTATC  48 108
        tolB NONE
         pal NONE
        cpoB 1524477 .. 1524493 +  -2.9  -4.87665   TAATTGGCACAAAAA              TTGCGCA TCA TGAGCGA              TTTTTGTGCCTAAAC  68 49
LQF52_RS06785 1524746 .. 1524758 +  -6.9  -2.75712   AAGTATCAAAGTAGT                TCCGC ATT GCGGG                TCGTTAGCTCAGTCG  55 67
LQF52_RS06790 1525038 .. 1525059 +  -2.1   -3.5525   ATGGAGTCATTGCCA           CAGGGAAGC GCGT GTAGCCCTG            TTTAGGAAGATATAT  47 232
LQF52_RS06795 1526196 .. 1526206 +  -6.8  -4.16259   TTCTGATATAGAGGC                 TGGC CAT GCCA                 TTTCTCTCCTTGTCT  70 432
        nadA NONE
        pnuC 1528587 .. 1528604 +  -9.1  -2.52543   TCTGTAGAACCTCAA             CGCTGAG CTGG CTCGGCG              TACCTTCCAGCAACT  59 335
        aroG 1530759 .. 1530783 + -13.7  -5.67967   GTACTTGTGTAACAA          TCCGTAATCTC ACA GGGATTACGGA          TTTTTTTATGCTACT 100 197
LQF52_RS06825 1532119 .. 1532134 +  -2.4  -4.98255   TTAACTGAAAAGCAT              TACGGC ACAG GCCGGG               TTTTTGTCATTCAGG  69 37
LQF52_RS06880 1545164 .. 1545184 + -13.3   -4.7878   CCTTTCCTATTTTGA            TGTCCGGCT TCT GGCCGGACA            TTTCTTTTCTACCTC 100 49
        modA NONE
        modB NONE
        modC 1547986 .. 1547997 +    -3  -5.46706   TTTTCATCATAAAAA                GTAA TCGA TTAC                 TTTTTGTTTTCACCT  79 207
LQF52_RS06900 1548916 .. 1548937 + -15.9  -3.30124   AGTAATAGCTATCAA           CCTGCGGTC AGCG GACCGCAGG            TTGTCAGACATGAAA 100 36
         glk 1554844 .. 1554884 +  -9.9  -3.43218   TGTTTGCGAGTCGAA CGCAATCAGGAAAAGTGA CAGCTC TCGCT-TGCCTGATTGCG  TTACTGTTGGTTATG  75 44
LQF52_RS06935 1556089 .. 1556110 + -12.3  -4.80167   GCCAAAAAAATTCAA           CGGGTTAGC TTAG GCTAGCCCG            TTTTCGTTTTTACTC 100 37
         pgl 1557394 .. 1557415 +  -8.7  -4.72188   CAAGCACAACATTAA           GCCCTGC ATTGATCC GCAGGGC            TTTCTTTTCGATTAG  89 47
        apbC 1568528 .. 1568540 +  -6.9  -2.90392   AAGGGTGGCGTGAAG                GGGGG TAA CTCCC                TATAATTGCCGCGTC  56 126
         udk NONE
         dcd 1569976 .. 1569989 +  -3.1  -2.74144   CCTGTAAGGTAAAAA               GCA-GG TGG CCGTGC               GTTTCGCAATGAGGA  43 56
        asmA 1571866 .. 1571901 + -11.2   -2.6176   GACATGCTGCGCTTT    TAGCCAGTTTGCTGAT TCCT GTCAGCAGACTGGCAG     CTTCTCGATAACGTT  77 47
        dcuC 1573699 .. 1573722 +  -3.1  -4.02334   TCTGGTTTGCAGCAA          GAAG-CGCGA AGCTA TCGCGGCTAC          TTTGTGGTATGCCTA  56 263
        wecA NONE
LQF52_RS07020 1579067 .. 1579082 +  -3.3  -4.07968   GAGTTCGTAATTGGC              CATAG AGATAA CTATG               TTTGATTCTATATTA  57 21
LQF52_RS07025 NONE
         wzc 1581745 .. 1581777 + -10.7  -5.18726   GGGCTCGATATTAAA      CTAAAGTTCGCCTTC AAT GAAAGCGAACTTTAA      TTTTTCTTATAAAGA 100 72
LQF52_RS07035 1583047 .. 1583058 +  -4.4   -3.0782   AAATATAATTTGGAG                TGCA AATA TGCA                 TATATTAAGAAATTC  49 44
        wbaP NONE
LQF52_RS07045 NONE
LQF52_RS07050 1587000 .. 1587016 +  -2.3  -4.98522   ATATAAATCGAAAAC              TATGAAG TGA CTTTGTA              TTTTTCTGTGACATT  69 253
LQF52_RS07055 1588162 .. 1588172 +  -2.6  -3.72051   ATAAAAAATTCTTGT                 TTTT TTT AAAA                 TTTAACATTATTAAC  52 130
LQF52_RS07060 NONE
        cpsG 1591115 .. 1591131 +  -2.4  -4.70117   TTAAGATGTTTTGTT              TTAAAA GTGAA TTTTAA              TTTATTTATTGAATT  64 102
        rfbB NONE
        rfbA NONE
        rfbC NONE
        rfbD 1594618 .. 1594646 +  -8.3   -2.8626   ACTGGACTGATTTAA       TG-TGCATCAGG AAAATA CCTGATGCAGCA        TAATTCCATTTTATT  65 31
LQF52_RS07090 NONE
LQF52_RS07095 1596859 .. 1596880 +  -3.1  -3.67558   TTTAATGAATACTCA           TTTTTTTTC TATT GAAAAATAA            TTCTTAGGATATGTC  51 4
LQF52_RS07110 1600370 .. 1600392 +  -4.8  -5.34309   CTTTAATGTTGGCTA           TCGCCTCTAT AAT AGAGAAGCGA           TTTTTATTTAATGCT  87 389
LQF52_RS07115 1603623 .. 1603633 +  -6.8  -4.59773   CACCCCCTGATGATT                 CAGG CTG CCTG                 TTTTTCCCGCTCCGG  79 149
LQF52_RS07125 1606391 .. 1606416 + -10.4  -5.93252   TAACTCGCTGTAAAA         CCGCAGATCG TTGAAT CGTTCTGCGG          TTTTTTCTTTTTCCC 100 51
        gndA 1608057 .. 1608080 +  -8.2  -5.72616   CGTTTGTTAATAAAA          CGCCAGAT TAGGAAAT ATCTGGCG           TTTTTTTGTATCGGT 100 80
LQF52_RS07135 1608783 .. 1608798 + -10.4  -4.85782   TTGCTGTTACTCTAA              GGCCAC TTCG GTGGCC               TTTCTTTTTCCAGGC  91 43
LQF52_RS07140 NONE
LQF52_RS07145 NONE
LQF52_RS07150 1612469 .. 1612497 +   -16  -5.38951   TTTAGGGTGAATCAA        GCCCGTCATGGC CGAGT GCCACGACGGGC        TTTTTTGTGTGCGTT 100 55
LQF52_RS07155 NONE
LQF52_RS07160 1615195 .. 1615234 + -11.7  -6.11644   AAGGCCCGAGCGAAA  CCTGATACGACGCATGTT ATCCA GACATGT-TCGTATCAGG  TTTTTTTTTGCCTGA 100 185
LQF52_RS07165 NONE
LQF52_RS07170 1617861 .. 1617872 +  -2.2  -2.73441   CAAAAATTGCTCACT                CGTG CTGA CATG                 CTTTCAGCCATAATG  40 187
        adrA 1619238 .. 1619269 +  -4.4  -4.41206   CTGATTAATAAACAA      CTC-ATAGGAGATGC ACA GCGGCTCCTGTCGGG      TTTTCTCCACTAATT  68 269
LQF52_RS07190 NONE
        iolD 1624596 .. 1624626 + -15.5  -3.54741   CTGGCTTAACGGACC       GCTTGCGACACGT TCCAT ACGTGGCGCAAGC       TTTCGCCGCGTCCTG 100 235
        iolG NONE
LQF52_RS07205 NONE
LQF52_RS07210 NONE
LQF52_RS07215 1629740 .. 1629754 +    -7  -2.87132   CGACACCTACGCCAA               GAGCCG TCG CGGCGC               TATCTGAGCCGCACC  56 4
LQF52_RS07220 NONE
        iolC NONE
        iolE 1633838 .. 1633863 +  -2.5  -3.59979   CCCCGCATCTTCAAG         CTGCCAGTA GATCAACG TGCAGGCAG          TTTGAAGTCGGGGGG  50 55
        iolB 1634760 .. 1634796 + -11.6  -3.41024   AACGAACATAAGAAT    GGGCAGTGGCTTATAG ATCAG CTGTAGGCCGCTGACC    TATTATGTTGGGGGA  83 52
LQF52_RS07275 1645080 .. 1645092 +  -4.9   -5.1286   CATAAAAAGCCATCG                GTTTA AGA TAAAC                TTTTTCTACTTTTTC  80 470
LQF52_RS07290 1646499 .. 1646543 + -15.2   -4.7078   GGCCATTAATTTTAT CGAGAGAACGCTGCCAT-GGT GTTT ACTGATGGCGGCGTTCTCTCA TTTTTAAATCGTTAA 100 32
LQF52_RS07300 1648488 .. 1648504 +  -6.5  -2.63596   GTTTTCCTAGAAAAT              CCAGCGT CCG ACACTGG              TAGTGTCCGGTGAAC  53 31
LQF52_RS07305 1648660 .. 1648671 +  -4.4  -2.52464   GAGCAGCTTAAAAAT                TTCC TGCA GGAA                 TAAGTTCAGCCACAC  46 11
LQF52_RS07315 NONE
LQF52_RS07320 NONE
LQF52_RS07325 NONE
LQF52_RS07330 1653581 .. 1653616 + -16.4  -2.66748   TAAAATGATAAAAAC    AAAAATCCCGCTTAAG TTTC CTTAAGCGGGATTTTC     TAAATTTGGCTCCTC 100 257
LQF52_RS07385 1669232 .. 1669260 + -11.8  -3.26767   ATGTGATAATCGTAG        CGCTGCCATTTT ACTAA AAGATGGCGGCG        TATTAATTGGGTATT  83 49
LQF52_RS07390 1670461 .. 1670500 + -15.9  -3.85518   ACTGAGTCTATCGCA  CTATGCCACTCGGCG AATTTGTTAA TGCCGAGTGGCATAG   TTATTGGTTCATGTT 100 110
        hypT 1672508 .. 1672529 +  -6.5  -3.18023   CTGAGGTTCCTTATA           GGC-GACGAC TTC GTCGGCAGCC           TCTTCCTCATCATCA  56 149
LQF52_RS07425 1682025 .. 1682062 + -12.3  -2.96153   CGCATGTAATACCTT   GGATTACAGAGAGAAAAT GGC ATTTTC-CTCTGTAAACC   TGATTGTGTTAATGT  82 239
LQF52_RS07430 1684370 .. 1684383 +  -5.3  -3.16742   TGCTTACCCCAGTCA               CTTAC TTGA GTAAG                TTCCTGGGGATTCGC  52 122
LQF52_RS07435 1685082 .. 1685125 + -14.1  -4.07687   CTGTCGCGGCCATGT TCAC-GCCTCTGCGGGT-ACA CTTT TGTTGCCCGTAGAGGCGGTGA TTTTCCGGCCAGCGT 100 61
LQF52_RS07440 NONE
LQF52_RS07445 1687893 .. 1687906 +  -3.8   -2.5294   GTATGGGCGCTAATG               GCTG GATGAA CAGC                ATGTTCTGGCGGCTG  44 28
LQF52_RS07450 NONE
LQF52_RS07455 NONE
LQF52_RS07460 1690209 .. 1690237 + -12.4    -4.015   ACTGTTTCAGAAGCT        GGCAAGCCGGAC ATAAA GACCGGCTTGTC        TTATTTCCTCACTCG 100 10
         cbl 1693622 .. 1693634 +  -7.7  -3.30443   AATATGGTTTATCGT                GCAGA TAA TCTGC                TTGATCTGATCGTGC  65 170
        gltP 1695249 .. 1695276 +   -17  -4.79683   TAAATAGCTTATGAA        CGGGCGCGTCGA GTGA TCGAGGCGCCCG         TTTCTTTTATGGATT 100 54
LQF52_RS07505 1700652 .. 1700666 +  -2.2  -2.98524   GGCCTGAAGAATTAA               TTGATA ATT TATTAA               CTTATTTAACTGATT  42 34
LQF52_RS07510 NONE
LQF52_RS07515 NONE
LQF52_RS07520 NONE
LQF52_RS07525 NONE
LQF52_RS07530 1705053 .. 1705072 +   -15  -4.18018   GCAACAGAAATGAAA            GCCGCCCA TTGC TGGGCGGC             TTTTAGGTAGAGAGA 100 28
LQF52_RS07575 1717856 .. 1717874 +  -4.6  -2.98823   TTTGCAGATAGTGAT             GAAAAACA AGA TGGTTTTC             TCTCTGTAAGGAAAA  49 109
        patD 1719433 .. 1719446 +  -6.7  -4.33854   CTGGACAAAAGTGGG               GCATC GCAA GATGC                TTTGATTTTCTTCAT  74 141
        ygjG 1721098 .. 1721121 + -12.5  -5.89921   ATGTTCACTCCGAAA          GCCAGTCAG CCCTTA CTGACTGGC           TTTTTTTATTCTCCT 100 72
LQF52_RS07590 1723622 .. 1723645 + -16.8   -4.8143   TTGAAGGTTTTATTT          GCCAGTCAGC TTTT GCTGACTGGC           TTTTTGCATTCTTGA 100 116
LQF52_RS07600 1725761 .. 1725773 +  -2.7  -2.56747   AAAATACCCCGCTGA                CATTA ATG TGATG                ATGTTGTAATAACTA  40 40
        proP 1727548 .. 1727565 + -12.7   -4.3467   TACTGTCTTAAGCAA             GCGCCAC AGAT GTGGCGC              TTTTGCTATGCCCCT 100 50
LQF52_RS07610 1729003 .. 1729020 + -12.7  -2.61264   GGGTTGAAGCAATAC             GCGGGCA GGGA TGCCCGC              ATTCTCGATACCAAA  81 52
LQF52_RS07670 1743907 .. 1743952 +  -8.9  -2.78596   CTGCGAAATAATCAC GAATGCGCTCACAGGGTC-GGT AGT GCCAGAGCCGGTGAGCGCAGCC TGTCCTGCGCCAATA  66 30
LQF52_RS07700 NONE
LQF52_RS07705 1754776 .. 1754786 +  -5.4  -3.95653   TCGTTTTCGCGCTGA                 GAGA AAA TCTC                 TTTGTCACCTTGTTT  63 239
LQF52_RS07715 1756458 .. 1756476 + -12.4  -2.62263   ATCCGGCATCCAGCG             GGTCGCCG TTG CGGCGATC             TGCTCTGCCAGCCGT  72 57
LQF52_RS07745 1762169 .. 1762210 + -19.5  -5.43866   CGCGTATTACTACAT TCGGCCTTTGCCTCCTCCT TGAC GGGAGAGGGCAGAGGCCGA  TTTTTTTAGCCGTTG 100 52
LQF52_RS07760 1764461 .. 1764499 +  -9.6  -2.88959   TCTCCAATCTAAATA  TCACC-GCACCGTGCGA CCTTGC TCGCACGGTGCTGGCAA   TGCTATTTCATCTGC  70 70
LQF52_RS07765 1765495 .. 1765508 +  -5.9  -3.50532   TCTGTATGCCCCACA               CCTCG ATAG CGGGG                TTGATTGCTTTGGCT  57 448
LQF52_RS07775 1766541 .. 1766567 + -10.9  -3.53091   TCCCTGCGATTTTGG        CCTGGCTGTGCG TCCC CGCGCAGC-AGG         TTTGACGGGCACCGT  81 62
LQF52_RS07785 1767473 .. 1767485 +  -9.1  -2.60977   TACTGACTCGCTTAC                CTGCC GAT GGCAG                CCTTGTTTTTTGACA  66 71
LQF52_RS07790 1768281 .. 1768295 +  -7.8  -5.34309   TATCTAACCAGTGGG               TGACCG TTT CGGTCG               TTTTTCTTTCCTGAT  95 125
LQF52_RS07805 1771580 .. 1771595 +  -4.6  -4.66814   GCGGACCCGCATACA              CCGGAT ATGC AACCGG               TTTCTTATTTCTGTT  71 79
LQF52_RS07810 1773182 .. 1773216 +  -9.3  -5.00642   ATCAGCTAAATGGAT     CTTTCCCGATGCTGG GGGAG TCGGTATCGGGAATG     TTTTTATGTGGATTA  93 32
        eamB 1775056 .. 1775070 +  -3.5  -3.60098   CCAAAGACATAGTCT               GCGCA GGCAA TGTGC               TTTACACTGCGCGCT  51 213
LQF52_RS07825 1775627 .. 1775665 + -10.4  -2.61548   TTTGGGTTGACCCCG   TGCCGAAATCCTGCGT CATGCAT AAGCAGAATTTCGGCA   TCGCTTCTGATAGCC  70 46
LQF52_RS07830 1776354 .. 1776365 +  -7.2  -4.25848   CCTTATCGATGAAAA                GCCC TTCG GGGC                 TTTTCATGAAGACTT  74 58
LQF52_RS07840 1778544 .. 1778569 +  -7.5  -4.03806   AAGAGGCTAAAAAAA         TCCCGCCTAAG TTTC CTCACGCGGGA          TTTCTACATTTGGTT  72 117
LQF52_RS07860 1782074 .. 1782093 +  -3.6  -3.60839   ACCGTTTCATCGTCA            GATAGGTG CTGA TATCTATC             TTGGTTATTGGTTTT  51 21
LQF52_RS07865 1783145 .. 1783180 + -16.4  -2.64472   TTAAGTGATAAAAAC    AAAAATCCCGCTTAAG TTTC CTTAAGCGGGATTTTC     TAAATTTGGCCCCTG 100 77
LQF52_RS07885 NONE
LQF52_RS07890 1787290 .. 1787303 +  -3.8  -3.54346   ACAGTAAGCTCAACG               CTGG CCGAGC CCAG                ATTTTCTTTCAATCT  51 244
LQF52_RS07900 1789578 .. 1789622 + -14.6   -5.1361   TGTTGATCATTGAAT TATGAACACCGACTCGCTG ATTTCGGC CAGCGAGTCGGTGTT-GTA TTTTTTACACTTTAT 100 100
LQF52_RS07920 1792835 .. 1792858 +  -9.7  -4.58644   ATATGTTTTTGAAAA          TGGCGATAA TATTTC TTATCGCCA           TTTTAATTATTGGTT  89 60
LQF52_RS07935 NONE
LQF52_RS07940 NONE
LQF52_RS07945 1798044 .. 1798057 +  -3.1  -2.93382   GAAGTCATGCTGGAT               TGGTT TAAT AGCCA                TATCTGAATATAGCA  44 5
        tatA 1798687 .. 1798699 +  -4.8  -3.44586   ATGAAGTGGCTCTTT                CAGC AGACC GCTG                TTGTGCTGGATTGAT  56 257
LQF52_RS07970 1800660 .. 1800686 + -10.8  -3.09516   CTCCAGCTGTGTGTT         GGCGTTGCCACA ATC TGTGGCGGCGGC         TTGCGTGATGGGCAA  69 398
LQF52_RS07980 1801442 .. 1801472 +  -2.5  -4.08216   ATCCGTCGGCGTACT      CCCTTATGGTCGGG CGAT CCCT-CCATAGGCG       TTTTGCCGCGCGTCG  56 64
LQF52_RS07985 1803555 .. 1803591 + -14.5  -3.29511   TAACGTACGGATAAA    CTGCACCGTAGTCATTC TTT GACGGATTACGGTGCAG    TTCTGGGGCGATACG 100 50
LQF52_RS07990 1803930 .. 1803956 + -16.7  -4.57837   ACGGTCATGAAGAAA         TAACGGGAGGC AAATG GCCTCCCGTTA         TTTTTGCGGACGTAT 100 59
LQF52_RS08005 1807908 .. 1807934 +  -9.5  -2.84977   GGTTTTCTATCGAAA         TGTGCCTGCAT GATTA ATGTAGGCACG         ATCTTTTCCCTTATC  70 69
LQF52_RS08015 1810627 .. 1810658 + -21.8  -3.86897   AATCTGAACGTAAAA      CAAACAGGGACACC GCAT GGTGTCCCTGTTTG       TTTATAAAGAATGAG 100 41
LQF52_RS08035 NONE
        gsiB 1817557 .. 1817567 +    -4  -4.43307   GTCTGTGGAAAACTG                 TTCA TGC TGAA                 TTATTTTATTAAACG  64 131
        gsiC NONE
        gsiD 1819405 .. 1819422 + -14.1  -4.59773   AGCTGAATAAAAAAA             GCGCGGC AAAT GCCGCGC              TTTTTAGCAGTAAGG 100 35
        bioB NONE
        bioF NONE
        bioC NONE
        bioD 1829950 .. 1829988 +  -4.6  -5.04249   TGTTTTCTCACTCAA   TGGATTAACGCGATTTTT TTT AATGGAAGCGTTAATCCA   TTTCTTTTTTAAAGA  77 121
LQF52_RS08105 1830592 .. 1830604 +  -5.5  -3.50869   AGTTCCTATCTGTTC                TGGCA AGA TGCCG                TTATGTGAAATGATG  57 5
LQF52_RS08110 NONE
LQF52_RS08115 1831841 .. 1831853 +  -3.4  -2.60032   GGTGACGAAGAGGGT                CTAG GGACA CTAG                CGTTTTTAGAGAGGA  42 42
LQF52_RS08120 1832611 .. 1832635 +  -8.7  -3.13191   TGCGGTGTTGTGGGA          GTTATCCAC CATTTCT GTGGATAAC          TATGTGTATTATGGA  67 351
        uvrB 1835098 .. 1835112 +  -2.8   -2.6914   CAAGCGCTCACTGAG               GATCAA TGA TGGATC               ATTCTATACCGGGTG  40 46
LQF52_RS08130 1836004 .. 1836016 +  -6.9  -3.22091   CCACTTCGCCATAAA                CGGGG TTG CCCTG                TTCATCAATTGCCAT  56 492
        moaA NONE
        moaB NONE
        moaC NONE
        moaD 1839145 .. 1839161 +  -3.5  -3.21099   GAAGTGGCGTTTTTC              CCACCGG TAA CGGGAGG              TTGATCGTGGCAGAC  46 5
        moaE 1839685 .. 1839700 +  -2.4   -3.1706   TCGATCCCCCAATCA              GGCGGT TCGC GCCGCG               TTAATCAGATAACTT  44 90
LQF52_RS08165 1840450 .. 1840481 + -20.2  -3.20207   CGTTAATTTATCTCT      CCTGTCTGGCGCGG ATCC CCGCGCCAGACAGC       TTCCTACCTACTATT 100 35
LQF52_RS08190 NONE
LQF52_RS08195 NONE
LQF52_RS08200 NONE
LQF52_RS08205 NONE
LQF52_RS08210 NONE
LQF52_RS08215 1852958 .. 1852969 +  -4.4  -2.52464   GAAAAACGTAGGGAA                CGTT TTTC AACG                 TCGCTTGCGACGGCC  46 30
        rhlE 1854840 .. 1854857 + -12.7  -5.63504   CAAGTAAAATCGATA             GGGAGCC CAGC GGCTCCC              TTTTTTTATCACGTT 100 34
LQF52_RS08230 1856774 .. 1856791 + -12.7  -4.51238   ATGATGTTTTGCTGA             GGCGGAC GGAT GTCCGCC              TTTCTCTTTTCTGGA 100 41
LQF52_RS08240 1859846 .. 1859865 +   -15  -2.53263   AGACGTAGTGAAAAC            GGCACGCC GTAC GGCGTGCC             TGACTTCGGCGTAGC  89 40
        dusC 1861724 .. 1861744 +  -8.3  -2.51179   ATCGCCCGTGTGATT            GGTGAGC CATAAGC GCTCACC            GCTTTTCCGTTCTCT  63 14
        mmuP NONE
        mmuM NONE
LQF52_RS08265 1864879 .. 1864911 +  -9.8  -5.52384   TCAGCTACTATTAAC      GGCGGTCAGCGTCC AGCAA GGATTCTGACCGCA      TTTTTTTGCTGGGAA 100 63
        cyaB NONE
LQF52_RS08275 1866215 .. 1866225 +    -4  -3.15579   GGCTATCACCGTTTA                 TGAA AGC TTCA                 TTGATGAAGGCTTAA  48 55
LQF52_RS08280 1866815 .. 1866825 +    -4  -2.72028   AATTGTTTGTCAAAA                 TTTG TCA CAAA                 GCTTTTTCTGCTGCA  45 49
        pbpG 1867876 .. 1867907 +  -6.5  -4.12188   AAACTGAATAATCAG      TACCCCCTTCCCA ATGCTG TGGGAAGGGGACG       TTTTGACGGTGGTCG  68 30
        bglX 1871339 .. 1871375 + -17.3  -3.45023   CCTGCTATAATGACG    TTTGTCTCGCCGCCGAA AAT TCCGGCGGCGAGACGTA    TTGTGCTGATCGTAA 100 31
         idi 1872343 .. 1872353 +  -5.4   -3.1355   GCGCTTGTATCTTTC                 TCAC GTA GTGA                 TTAGCTATCACTACA  54 395
LQF52_RS08310 1873874 .. 1873884 +  -8.2  -2.75183   ACCCAGAGCAGATAG                 GCCG CCC CGGC                 TAATTCGATGAGGGT  57 372
        dinG 1877602 .. 1877612 +  -5.4  -4.63952   CAATAATAAAAATTA                 GTCA CCG TGAC                 TTTATTATTTATCAT  74 305
LQF52_RS08330 1879283 .. 1879301 +   -16  -4.73682   CGTGTGATGTAGCAA             GGACGGGG TAA CCCCGTCC             TTTTCTGTTATCGAC 100 34
LQF52_RS08335 NONE
LQF52_RS08340 NONE
LQF52_RS08345 NONE
LQF52_RS08350 1884372 .. 1884393 +  -4.4  -3.96148   TCATTTTGCATAATG           GCCTCC ATTCTTATCA GGAGGC            TTTATCGTGAAAAAA  59 236
LQF52_RS08355 NONE
LQF52_RS08360 NONE
LQF52_RS08365 NONE
LQF52_RS08370 NONE
LQF52_RS08375 1886691 .. 1886712 + -15.9  -5.61596   CGTCATCTTCCTTTG           CGCCAGCAC GATT GTGCTGGCG            TTTTTTTATCGAAAT 100 87
LQF52_RS08380 NONE
LQF52_RS08385 1887536 .. 1887550 +  -3.4  -3.03829   GATAGCGCAACGGAG               GTGACC CTT GGCCGC               TAATTATTTACATGG  45 8
LQF52_RS08390 NONE
LQF52_RS08395 1889507 .. 1889525 + -13.1  -3.03525   TAATTTATCTTCCAA             GCCCGCC AGTGG GGCGGGC             GTTTCTATCAATCAA  86 38
LQF52_RS08400 1889877 .. 1889890 +  -9.5  -4.15044   GTTATCGCAATGAAA               GGGGC TTCG GCCCC                TTTCTTACACCCACC  81 55
LQF52_RS08405 1890577 .. 1890590 +  -9.5  -4.42386   CGCCGTCTCCGATCC               GCCCC GCAA GGGGC                TTTTCTGAATGAGAG  86 295
LQF52_RS08410 1893014 .. 1893028 +  -5.6  -2.64299   CACTCAGCGTGAGCG               CAGGGG GTA CGCCTG               ATGTTTGCGGTATTA  50 10
LQF52_RS08420 NONE
LQF52_RS08425 NONE
LQF52_RS08430 NONE
LQF52_RS08435 NONE
LQF52_RS08440 NONE
LQF52_RS08445 NONE
LQF52_RS08450 NONE
LQF52_RS08455 1900669 .. 1900710 +  -4.3  -4.17608   TCAGGCCATTCAACG TCGGGGGCTTTTGATGTAT CAAG ACGCATCAGTTGCACCCGA  TATTTTTTCCATGCA  64 58
LQF52_RS08475 1903042 .. 1903076 +  -2.1  -3.83026   GGGGTAAGGATGGCG    TTCCTGGCGC-TGGCT AAAA AGCCGCGCGATAGCAA     TTTCCTCTGCGCCAG  51 9
        ybiB 1904184 .. 1904197 +  -8.1  -2.90496   TCGCGCCACTTCACG               CAGCC AGAC GGCTG                TCATTTGAAGAGAGA  61 73
LQF52_RS08485 1906119 .. 1906134 + -11.8  -3.72324   TGCGAGTAAGAGAAA              GGGGGC GAAA GCCCCC               TTGTTGATCAAGATA  93 54
LQF52_RS08510 1910132 .. 1910146 +  -5.6  -3.17212   CTGCAGGTTTTATTG               TCAGCG TTG CGCCGA               TTGATGCGATGATAA  52 60
        ompX 1911923 .. 1911942 +   -10    -5.252   GATGTGTCGGAAGAA            TCCGCTCT TTTC AGGGCGGA             TTTTTTATGGCGCTA 100 84
LQF52_RS08525 1913339 .. 1913358 +   -15  -3.00667   TTTGTGGTGTTATGA            GCGAGCGG AACC CCGCTCGC             TATCATTAATTTGTC  89 44
LQF52_RS08535 NONE
LQF52_RS08540 1916241 .. 1916254 +  -3.8   -3.9777   GGTTTTATGCTGAGG               GCCA CTGTTA TGGC                TTTATCGGTATTAAC  57 164
LQF52_RS08545 1917156 .. 1917174 +  -3.2  -3.09135   CGTCTAATAACACTA             CAGTTAAT CTG GTTAATTG             TGTATTGAACATTAT  45 120
LQF52_RS08550 1917993 .. 1918007 +  -4.2  -2.69428   ATAGGCGACCGGTTC               GCGTAT AAC ATTCGC               CTTGATTACTTCTTC  45 338
LQF52_RS08560 1919151 .. 1919165 + -12.8  -5.31059   GTAAATCATATCTGA               GGCCGC TAA GCGGCC               TTTTTTACTTCCTGT 100 262
LQF52_RS08570 1921199 .. 1921236 + -11.5  -3.12327   CGGGGCGTTATTAAG   TCTCAGGTGTACTTAAT ATCT ATTAAGTACACCATAGA    TATTAAATGTAAAAA  79 408
LQF52_RS08580 1922569 .. 1922581 +  -3.4  -3.36327   TGTTCAGCAAGAAAT                CATC AGGGA GATG                TTATGAATAAAGTGA  48 7
LQF52_RS08585 NONE
LQF52_RS08590 NONE
LQF52_RS08595 1926061 .. 1926075 +  -4.3  -3.26473   GGTGATATTGGTATG               TTGTC AGGAC GACAA               TTAATAATAATTTAA  50 77
LQF52_RS08600 1926673 .. 1926686 +  -5.3  -3.65112   CATATCAATAAATGT               TAACC AATC GGTTA                TTATATCGTTTAAGT  57 179
LQF52_RS08605 1932044 .. 1932056 +  -3.5  -3.48924   CTGAAAACCATAAAG                TTAAT AAT ATTAA                TTGTATGGAAAGTGA  50 456
LQF52_RS08610 1932863 .. 1932873 +  -5.4   -3.1247   TGTGATTTTCCTATA                 TGAC AAG GTCA                 TTCACTATCAGACCT  52 127
LQF52_RS08640 NONE
LQF52_RS08645 1939226 .. 1939242 +  -3.8  -3.54146   TTTAAAAATAATTAT              CATAAA AATAC TTTATG              TCTTTAATTGGGCAG  52 358
LQF52_RS08655 1941113 .. 1941138 + -13.5  -3.07043   CCCCCGTTTTGACTG         TAGAGGTCAAT AGAA ATTGACCTCTA          TATTAAAATAGTAAA  87 50
LQF52_RS08665 NONE
LQF52_RS08670 1942748 .. 1942761 +  -5.3  -3.07487   TGTAAGGTCATGGGC               GTATC TCGT GATAC                ATTTTACCGCTATCG  51 440
LQF52_RS08690 1947471 .. 1947490 + -13.6  -3.65696   TCATGAACTAAAAAA            GTGCAGGG GAGA CCCTGCAC             TTAATTTATATGAAT 100 30
LQF52_RS08705 1951476 .. 1951500 + -13.7  -5.67967   GTACTTGTGTAACAA          TCCGTAATCTC ACA GGGATTACGGA          TTTTTTTATGCTACT 100 80
LQF52_RS08710 1952869 .. 1952897 +  -7.5  -3.09273   ATTTTTTGCACGATA        TGGGCTACTTT CCTACAA AATGTAGCCCA        TCTATGTTGAACCGA  60 70
        yejK 1958293 .. 1958306 +  -8.1  -4.59773   TGCGTGATGACATCG               CCCTG CTGC CAGGG                TTTTTCGCCATACCG  87 491
        rsuA 1962511 .. 1962528 +  -2.7  -2.95245   ATCGCCAGCGTAAAA             TAATGCT GCAT AGCATGA              CCTTTTTTCTTATCT  42 23
LQF52_RS08765 1963757 .. 1963789 + -19.4  -3.25717   TGATTTTCCCTTCTT      CTCAGATGCAGGAA AGATG TTCCTGCATCTGAG      TCTGTTCTCTCTGAT 100 38
LQF52_RS08770 1964474 .. 1964501 + -15.6  -3.14454   AATATCCCTTTTAGA        CCGCAGCGTCAG CAGA TTGGCGCTGCGG         TATTCCCTCATTTAT 100 27
LQF52_RS08815 1974667 .. 1974692 +  -6.9  -3.54424   GAAGCAACGGCAAGC         CGCATCAGGAAA CGT TTTCC-GAAGCG         TTTAGCAACGTAGCC  60 361
        fruB NONE
        fruK NONE
        fruA 1979692 .. 1979718 + -18.1  -4.90906   GATGTGGATGAGATA         GCGCCAGTTGG GTAAA CCAACTGGCGC         TTTTTACTATTATGG 100 84
        yieE NONE
LQF52_RS08855 1984398 .. 1984426 + -16.2  -5.27335   ATCACCTCTCACGAA        CACCGCTGATAA CATAT TTATCAGCGGTG        TTTTTATTTGGCAAA 100 84
LQF52_RS08860 1986787 .. 1986817 + -12.7   -3.3164   TTCTGATGTAGCACC      T-CCCCGGAATGGG TCAG CTCATTCCGGGGCA       TTATGACCCTCGCTT  90 35
LQF52_RS08865 1988278 .. 1988294 +  -3.7  -4.51197   TTGCCCGGCAGAGGA              ATGATGA TAT TCATCAA              TTTTAATTGATTATC  66 75
LQF52_RS08880 1992597 .. 1992618 +  -5.1  -3.35813   ATTTTTGATGTAGTT           GGCGTAGTA ACGA TACTTCGTC            TTGCTTGCCATCAGC  53 132
LQF52_RS08915 1999262 .. 1999284 + -11.3  -5.72622   GATTTATCGTTAAAA           GCACTGGGA TAGTC TCCCGGTGC           TTTTTTGTTTATCGC 100 91
        folE NONE
LQF52_RS08925 2001705 .. 2001715 +  -2.4  -3.59262   TGCGGCCCTAAAAAG                 CGCG GTT CACG                 TTTCAGGATATACAG  47 213
LQF52_RS08940 2005198 .. 2005219 + -14.5  -3.90112   GGTTGGAGTAATAAA           TCAGGCACC TTGC GGTGCCTGA            TTTACTTAAGACAGC 100 30
LQF52_RS08950 2006859 .. 2006875 + -13.7  -4.67697   ACAAAATATCCTTTG              GCCGGTC TAT GACCGGC              TTTCTTCTTTTCCGC 100 53
LQF52_RS08955 2007918 .. 2007928 +  -2.4    -2.954   GCGAAGGTGGAGGTG                 CTGC ATG GCTG                 ATTTATGGATCGATC  41 14
LQF52_RS08960 2008663 .. 2008680 +  -5.6  -3.74868   TTCTGGTCGTCCTGC             TGTCTG CATTTT CAGACA              TTCCTTATTTTTCCC  61 107
LQF52_RS08965 2010385 .. 2010404 +  -7.8  -3.39895   ACCATAATAATTCGC            TGCGCGGT CGCC ATCGCGCG             TTGCTTCATGCCCAG  61 336
LQF52_RS08985 2014620 .. 2014638 +  -8.8  -4.35693   TGAACCTATAAAAAA             GCGCGG ACGGTCG CCGCGC             TTGTTTTGTCAGTTT  84 54
        nfsA 2016183 .. 2016195 +  -6.3  -3.87815   TGGGCGATACGCTAG                TATCC GTA GGATA                TTTATGAAGATAGCC  66 26
        rimK 2017129 .. 2017147 +   -11  -2.94313   TCTGAAACAGGGACC             GCGCCGTA AAA TACGGTGC             TGCTTATTGACGTAT  75 44
LQF52_RS09005 2017877 .. 2017895 + -13.2  -3.78229   TCTGCATTGATACGG             TTGCTGCC AAC GGCAGCAA             TTGGTTTTACTTATT 100 31
        potF 2019434 .. 2019460 + -18.1  -3.71751   GGGTATAAAATGTGG         CGAACAGGCGG ATAAC CCGCCTGTTCG         TTCTCTATATTGTGT 100 107
        potG NONE
        potH NONE
        potI 2022553 .. 2022585 + -17.8  -4.56358   CCTAGCGAAGATTTC      CAGCAACGCCGCCA GAGTA TGGGGGCGTTGCTG      TTTTATATCAGTATC 100 67
LQF52_RS09030 NONE
        rlmC 2024746 .. 2024759 +  -5.3  -4.91109   AAGCACTTCAATCGG               TTACG ACGC CGTAA                TTTTTGTCATAGGGC  77 360
LQF52_RS09070 NONE
LQF52_RS09075 2031558 .. 2031579 +  -3.5  -3.08312   AACCCAGAAGGGTGC           CAGCGGGCG CGGA CGTCCACGG            TTCGGTGAGTGCCTT  45 140
LQF52_RS09100 2038997 .. 2039020 + -12.5  -4.43859   CGACCAATAAAAAAA          TGCCGTTCG ATATGA CGAACGGCA           TTTTGTCGCATTATA 100 47
        clpS 2040051 .. 2040066 +  -4.6  -3.08812   CTGTACGCTGGAAAA              AGCCTG AAGT CAGGCG               ATTTATTGGGAGAGG  49 19
        clpA 2042384 .. 2042401 + -11.3   -5.4833   CTGTGTTATCTAAGA             GGGATGC TAAG GCATCCC              TTTTTTATTGGGTCG 100 49
LQF52_RS09120 2043235 .. 2043263 +  -7.3  -2.62184   AATACCCTGAGCCAG        CAGGCGGTCGGCA AGC TGCCGATCGCTAA        TGCTATCCGGCAGGC  54 185
         lrp 2051574 .. 2051593 + -12.8  -3.96892   ATTTATACAGCCCCA            GCGCCGGG TTTT CTCGGCGC             TTTGTCATAAACCTT 100 85
LQF52_RS09160 2055158 .. 2055175 + -12.7  -3.28712   GTCACTCCACGATAA             GGGCTGC GCGA GCAGCCC              TTATGCAAAGAAGCG  90 60
        lolA 2055985 .. 2056006 +  -2.9  -2.88433   GACCAGCGTCAGTGA           GGCCAGAGT GAGC AATCTGTCC            CTTGATTTTTCCCAT  42 26
LQF52_RS09170 NONE
        serS 2058754 .. 2058767 +  -9.5  -5.41143   GGTTACCTGAATAAA               GCGCC TAAG GGCGC                TTTTTTTACGCCATA 100 45
LQF52_RS09180 2060262 .. 2060291 + -12.1  -3.71649   CACCATGTTATTCCA       CAGCGCTTCGGCC ACGG GGCTAAGGCGCTG        TTTCGCGTTTCGCAC  83 83
LQF52_RS09190 NONE
LQF52_RS09195 NONE
LQF52_RS09200 2065484 .. 2065504 + -12.6  -4.56597   CCGCCAAAATGAAAA            TAGCGCGC CCTGA GCGCGCTA            TTTTTCCAGAAAGCG 100 73
        serC 2073387 .. 2073403 + -13.7   -4.9725   ATACATTTTGATCAG              CCCCGGA CTT TCCGGGG              TTTTTATGTCCACGT 100 57
        aroA 2074738 .. 2074754 + -13.7  -5.04601   TTGATTCCTCTCTAA              GGCACGG TTT CCGTGCC              TTTTTCCTTTATCGA 100 37
         cmk 2075646 .. 2075675 +  -5.7  -3.01712   AGAAAACTGAATTTT       TACCTCGCTGT AAGGACGC ACAGCGGGGCA        TGTTAAACAACCCCA  52 45
        rpsA 2077428 .. 2077453 + -14.9  -3.31792   GTAATCACTACGGTG         GAATGAGCAAC GTAA GTTGCTCATTC          TTGTAACGGTAGTCA 100 37
        ihfB 2077821 .. 2077837 +  -9.4  -5.24449   ACCAGACTTATAAAA              GCACCC ATCTC GGGTGC              TTTTTTACATTTATA 100 56
LQF52_RS09295 2086621 .. 2086631 +  -2.4  -5.37043   GTCCAGTCGCTTTCT                 GACG ATG CGGC                 TTTTTTGTCTGCCGT  81 155
LQF52_RS09320 2095517 .. 2095530 +  -2.3  -4.64861   ACGAAATAAAAACCG               CCAAC GCGT GTGGG                TTTATTTTGAACAGG  64 106
LQF52_RS09325 2096451 .. 2096485 + -11.4  -2.55213   GACTATCCGTGTAAG     TACCAGGCTGCCGG CGCTAAA CCGGCAGCCTGCAA     TAGATTGCCTAAATA  77 39
        citC NONE
        citD NONE
        citE NONE
        citF NONE
        citX NONE
        citG 2102021 .. 2102036 +  -6.8  -3.17075   CTTGTCACGTGACGA              GGCGCA TAAG TGTGCC               TTGCCTTAAAGGACC  59 249
LQF52_RS09360 2103209 .. 2103234 + -11.3  -5.59564   ACGCGCCTTGCAAAA         TAACCGACGTCT AAT AG-CGTCGGTTA         TTTTTTTACATTTAT 100 240
LQF52_RS09365 NONE
LQF52_RS09370 2105019 .. 2105038 + -10.7  -5.42265   ACATAAAAGAGAAAA            GCGGAGC CAGTGC GCTCCGC             TTTTTTATGCTTTAG 100 56
LQF52_RS09380 NONE
LQF52_RS09385 NONE
LQF52_RS09390 NONE
LQF52_RS09395 2110450 .. 2110462 +  -2.7    -3.737   GCGTATCGCGGTATA                TTATC GTT GATAG                TTTGATGACAGATTA  52 16
        tmaR 2110990 .. 2111007 +  -9.1  -5.52079   ATAGCTACTGTAAAA             GGATCGC TTCT GCGGTCC              TTTTTCTTTTGCTGT 100 105
        betC NONE
        choX 2116451 .. 2116468 +  -2.7  -3.03701   AAGCAGAAAGTGGAA             TCAGGCTC ACA GAGTC-GA             TGTCGTTTACTGACC  43 93
LQF52_RS09430 2118901 .. 2118911 +  -2.4  -3.08464   GGTCGGCTATTTCTT                 CCCG ATT CAGG                 TTCACTACATGCTGA  42 44
        msbA NONE
        lpxK 2121700 .. 2121710 +  -3.2   -2.8082   TTTCAGGTATCCCTT                 GTGG ATA TCAC                 CTTATTAGATCGCTG  43 59
LQF52_RS09445 NONE
        kdsB 2122738 .. 2122784 + -11.1  -5.72622   ATGCGGCGATGAATA CGTCATGGGG-GAATCGATTCT TGCC GGAATAGATTTTCTCCATGACG TTTTTTCTTTATACG 100 54
LQF52_RS09455 2124534 .. 2124554 + -12.7  -3.73775   AAGGCTGGCCTTCGG            TGAGAGACA GGA TGTCTCTCA            TTTCATCCCGATGAG 100 232
LQF52_RS09460 2126151 .. 2126173 + -13.4  -3.17229   ATGATAAAGGCGAAC           GCCTTCCGTG ACG CGCGGGAGGC           TGTTGCTGATGAGAT  87 481
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 2133988 .. 2134013 + -14.9  -5.52384   TTTCCTCTATAATGA         TAAAGCCGCTT TTTT AAGCGGCTTTA          TTTTTTTCGTAAAGC 100 82
        ldtD 2136232 .. 2136252 +  -3.1  -4.47485   GCAGTTAAGGTTCAA            GGCGGTGCG TTT TGTGCCTCC            TTTTATACCGTTTTT  64 149
LQF52_RS09495 2136881 .. 2136897 +  -7.9  -4.16842   TACGGTTCGCGAATG              CAGAGCG AGC CGCTCAG              TTTATTCAACATGGA  76 71
LQF52_RS09500 2137625 .. 2137643 +  -8.8  -5.14563   GACAGAAATGAAAAA             GCCGACAC AGG GTGTCGAC             TTTTTTGATCGCAGA  91 85
        pepN 2146209 .. 2146239 + -16.2  -3.35996   CCACGCTAATTCTTC       GGTCACACGCGGTA GCC TGCCGCGTGTGACA       TTCTCCCTCGCGCTA 100 46
        pyrD 2147588 .. 2147619 +  -9.5  -3.30825   AAATGCCTTTCATTT      TTAGCTGGGGG TTTATTTATC CCCCCAGCTAG       TCTATATTTTATCCG  74 45
LQF52_RS09535 2148759 .. 2148771 +  -7.7  -4.08216   AATGATGCCCGTATT                TCTGG CGA CCAGA                TTTTGCCCAAAATCA  74 427
       rlmKL NONE
LQF52_RS09550 2153683 .. 2153720 + -13.6  -4.18018   CACGTGGTTGTATGA   CGCCATCAATATGGGA GTAATA TCCCGTATTGATGGGG    TTTTCAGTCAGAAGC 100 43
        pqiA NONE
        pqiB NONE
        pqiC 2157327 .. 2157369 +   -13  -5.77677   TCTAAAAAAATCAGG CCTCTAGAGATGTAATGC TGTGATT GCATTACGTTTTTAGAGG TTTTTTATTGTTTTC 100 91
         rmf 2157756 .. 2157775 +   -15  -5.42198   GTCATTAGAGGGAAC            GCCTCCGC TTTT GCGGAGGC             TTTTGTTTTTTAGGG 100 49
LQF52_RS09575 2159927 .. 2159960 + -18.3  -4.53303   TCCAACGATATAAAA     GAAAACGCCCCTGAC TTGC GTCAAGGGCGTTTTC      TTTTATATGGCGGTG 100 268
LQF52_RS09585 NONE
LQF52_RS09590 2162003 .. 2162013 +  -4.6  -3.89346   TCTTTCAGGTAAATC                 GCGC CCT GTGC                 TTTATCAAATACCGG  58 315
        rimJ NONE
LQF52_RS09615 NONE
LQF52_RS09620 NONE
        murJ 2169033 .. 2169057 + -14.4  -5.00138   TTCGTCATAAAAAAA          CGCCATTGGT TTGTC ACCAATGGCG          TTTTTGCTTTCAATC 100 129
LQF52_RS09635 2172255 .. 2172274 +  -2.8   -4.7078   TAGTTATTACTTTAA            TCGGCG TGATGATT CGTCGA             TTTTTCGATAATTAA  65 239
        cutC 2173198 .. 2173218 + -14.7  -5.71712   CATGGCAAGTACCAA            GCCCCAGCG TGT TGCTGGGGC            TTTTTTTGTCTAACG 100 139
        aspS NONE
        nudB 2180746 .. 2180757 +  -5.8  -5.03747   TTTGTTATTTATCCG                GCCT GAAC AGGC                 TTTTTTCGGAGATTT  80 20
LQF52_RS09680 NONE
        ruvC 2182119 .. 2182138 + -12.2  -5.53436   TGCGCTGAAACAGGA            GGCTGGAT ATTC ATCCAGCC             TTTTTTATGTTATAT 100 33
        ruvA 2182799 .. 2182821 +  -5.4  -2.50016   AACCCTGATCAGGGA           TGCACTGCGC GCG GCGCTGTGAG           GTATTCATGATAGAA  49 4
        ruvB 2183882 .. 2183901 + -13.6  -2.74645   TGCTTTCCATATTCA            GGGAGACC ACAT GGTCTCCC             TACGTTTATGTGATT  86 69
LQF52_RS09715 2188706 .. 2188734 +   -14  -4.87626   GTGCCGTCTTCAAAA        GCCCTTCTGAAT CACGT ATTCGGAAGGGC        TTTTTGCTATTGAGA 100 50
        znuA NONE
        mepM 2192767 .. 2192788 + -10.1  -4.61873   ATAGACTGCATGTTA           TGCCGGTGG CTTG CTGCCGGCA            TTTTCATTTATAGAG  91 44
        lpxM 2193954 .. 2193975 + -15.9  -4.79223   CGCATAGATAAAAAA           GCCGGACGA GAAA TCGTCCGGC            TTTTTGCTGGTATGA 100 73
         zwf 2198484 .. 2198520 +   -13  -4.84527   GATAATACGTCAGTA   ATG-GGGAGGCTGGCCG AGAA CGGTCGGCCTCCCACAG    TTTTTAATGTATGGC 100 47
LQF52_RS09760 2199301 .. 2199321 + -12.6  -5.36441   TGATTGAATGACAAA            GGCCACTC ACTGA GAGTGGCC            TTTTTTGTATCAGCC 100 50
LQF52_RS09770 2202791 .. 2202802 +  -7.2  -3.63627   GATTATGAGGGTAAA                CCCG TCTT CGGG                 TTTACCCTATCAGCA  67 55
        ftnA 2204270 .. 2204299 +  -2.1  -4.13767   ATGACTAGTTGAATG       ACGCGGGATAA TATTCTCC TTATCCCGCCA        TTTTCCCCTCCCGAA  55 66
LQF52_RS09785 2205071 .. 2205097 +  -9.6  -6.23209   AGAGCCATTTCCCTA         GACTGAATAC AGGAATC GTATTCAGTC         TTTTTTTTTGCTTCA 100 229
        cspA 2205741 .. 2205773 + -11.4  -5.06505   GGTCAAGAAAAGCAC      TGAAAACCCCTAGC GTAAA GCTGGGGGTTTTTG      TTTTTATATCTCATT 100 112
LQF52_RS09795 2206573 .. 2206584 +  -2.2  -3.73775   TGATCAGTTTGATGG                C-CGG TAT CCGAG                TTTCCTCCGGATGAG  50 442
LQF52_RS09805 NONE
LQF52_RS09810 2209039 .. 2209051 +  -3.3  -4.56978   TTTATCGCCACCTGA                TGCAG AAA CCGCA                TTTATTCTTTAGAAA  64 345
LQF52_RS09835 2215379 .. 2215398 + -12.2   -3.1552   GTGGCAATTGCCGAT            GGCGTCAT TATA ATGACGCC             TGTTCATGCCTGCGC  83 42
        proQ NONE
         prc 2218284 .. 2218313 + -12.1  -5.76949   ATCTGAGATCATCAA       GCGCCTTGTGGGG TTTA TCCAACAGGGCGC        TTTTTTTTGAACCTG 100 69
        pepT 2225787 .. 2225813 + -13.8  -3.87641   CATTTTGCAGAGACG         AATAAGGCGGGA TAT TCCCGCCTTATC         TTTGTAACCAGTATT 100 48
         icd 2235346 .. 2235362 + -13.7  -5.38958   CGCAGATGAAAATCA              GGGGCCA ATT TGGCCCC              TTTTTCTTTATGGAT 100 53
LQF52_RS09945 2239333 .. 2239349 +  -2.3  -4.04773   CTATTTCGCTTTTCA              TCTATTA TCT TAATTGA              TTCTTTCACTTGTTA  55 179
LQF52_RS09950 2241787 .. 2241802 + -10.4   -3.8901   CCGCCTCACCAGAAA              GCCAGC GTCC GCTGGC               TTTCATACTTTGCGC  82 71
LQF52_RS09955 NONE
LQF52_RS09960 NONE
LQF52_RS09965 2245809 .. 2245846 + -11.9  -4.85599   ACAGAGCTAATCGAA   TACCGTGGCGGGCAGTC GAAA GGCTGCCCGCCACCACA    TTTTTCTGACATAAG 100 31
        ugpB 2247396 .. 2247409 +  -2.3  -3.56162   CGGTTTCCCGTCACT               CGTGA TATT TCCCG                TTGATTTGGAGTTTT  47 21
LQF52_RS09975 2248297 .. 2248309 +  -9.1  -3.11359   TATTAGGATGACAGC                CGGCA GGA TGCCG                CTTTCCTTTTGAAAA  68 43
        htpX 2249356 .. 2249377 + -14.5  -4.12911   CCAACACTCTCATCC           CAAAGGCCC ATTC GGGCCTTTG            TTATTTCTGCGTTTA 100 58
LQF52_RS09985 2250859 .. 2250883 + -10.7   -4.2142   AATAATACTAATAAA          TCCGCGTCACA TTT TATGGCGCGGA          TTATTTTAAAATATT  88 39
        kdgR 2251871 .. 2251890 +  -9.3  -6.20267   CCTATTAATGCCTGA            GCCTGTC CTTGCC GACAGGC             TTTTTTTATTTTTGC 100 46
LQF52_RS09995 2252339 .. 2252381 + -10.7  -3.80733   AAACACCTATCCCTT TGCCTGCTTACGTCATT CTTCATGCT GATGGCGTGAGCGGGCA TTGTTATAAAATGAA  85 66
LQF52_RS10000 2254009 .. 2254019 +    -4  -3.29109   GCATGGGTAACACTT                 TTGA TTT TCAA                 TTGATATACGATTTT  50 208
        thrS NONE
        infC 2256576 .. 2256599 + -11.1   -3.1247   ATTCAAGTAGCAAGA          CCGTACAAC CTCTGT GTTGTACGG           CTTTGTTCGCCTTAT  76 44
        rpmI NONE
        rplT 2257262 .. 2257281 + -13.6  -4.26344   GTAAGTCAGTTGAGA            GAGGGAGC TTTG GCTCCCTC             TTTTCGTCGAGCTCT 100 37
        pheM 2257434 .. 2257451 + -12.7  -5.64421   AAAAGTAGCGCTTAA             GCCTCCC CATA GGGAGGC              TTTTTTGTTTACAAT 100 49
        pheS NONE
        pheT NONE
        ihfA 2261272 .. 2261287 + -11.8  -4.45723   AGAGTCACCCAAAAA              GGCCGC GCAA GCGGCC               TTTTCCTATCTTATT 100 42
        osmE 2266153 .. 2266186 + -19.7  -4.36914   ACGGCCCGTCATAAA     GAAAACGCCGACAGC ATCA GCCGTCGGCGTTTTC      TTTTGTGCAGCAAGC 100 94
LQF52_RS10125 2278599 .. 2278626 + -13.4  -3.81951   CTGTAATGCTTCAAA        GCGTGGTCAGCC AGTA GACTGGCCACGC         TTTCGTCATATCCCA 100 35
LQF52_RS10135 2280093 .. 2280128 + -13.4  -4.21933   GGCTGCCAGTCTGAT    TAACG-GTCTGGCGCAG CCG TTGCGCCAGACGCGGTA    TTCTTTTCACCTTAG 100 27
LQF52_RS10165 2285894 .. 2285906 +  -6.2  -2.74322   GGTTTGTCTGTATAA                CGCC TTTTT GGCG                GTTTAAACAATTAAA  53 26
        cspE 2286166 .. 2286181 +  -7.5  -5.60689   AGCTCTGTTGCAAAA              CCCGC CATGGT GCGGG               TTTTTTGTTGTCTGC 100 47
        rlmA 2287100 .. 2287126 + -14.4  -3.27498   GAGAAGAATAAAAAA         CGGGCAGCGCGA GAG TTGGGCTGCCCG         TTGATGTGAAATGTG  95 43
LQF52_RS10205 2293595 .. 2293615 + -18.3   -4.7497   CGATTGCAAAATGAA            GCCCCGCCA ATT TGGCGGGGC            TTTTTCATAGATGGA 100 57
LQF52_RS10225 2298100 .. 2298112 + -10.5  -4.35524   TAGGATCGCATCTAA                CGCGC CCA GCGCG                TTTTCCGTTTGCGCC  90 262
LQF52_RS10235 2300465 .. 2300479 +  -2.8  -2.87881   AAGATTTATTTATCC               TGCC TGAGGTT GGCA               TGTCTACGCGAATTC  42 127
        tsaB NONE
LQF52_RS10245 2302073 .. 2302094 + -13.1  -5.81412   TTCGGTGTGAAGAGA           TCAGGCAAC GCAG GTTGCCTGA            TTTTTTTTGAATAAA 100 189
        fadD 2303991 .. 2304007 + -10.8  -4.72201   GATATGATGTTTTCA              CGCCGG TTTAT CCGGCG              TTCTTTTTTATGGCG  95 83
         rnd 2305540 .. 2305554 +  -2.8  -4.72986   GTTCAACTCAAGCAC               GGAAAT ATC ATCTCC               TTTTTGCTCAAGCTG  70 296
LQF52_RS10275 2307914 .. 2307932 +  -8.9  -3.52874   GTTGCGATGATATAA             CGATGGT TTTGC ACCATCG             TGTTCTTATATACAC  73 264
LQF52_RS10280 NONE
LQF52_RS10285 2309410 .. 2309441 +  -5.1  -4.82901   TGGTTAAAACAAGAA      GCCCCTCAAACTGA ATTAC TCAGAA-GAGGGGC      TTTTTATCGGGGGGG  75 83
LQF52_RS10295 2310125 .. 2310142 + -12.7  -4.15833   AAACAGTTACCAGAA             GCCCGAC TCTC GTCGGGC              TTTTCGGGTAATAAT 100 68
        fadR 2313441 .. 2313468 + -16.4  -4.37506   GTTTCATTGTGAAAA        GGGGATTCAGGT TGTT GCCTGAATCCCC         TTTGTCTTTGGTCAT 100 54
LQF52_RS10355 2321945 .. 2321966 +  -5.8   -3.4072   TTTAAACTACGTGCG           GGGCAGTG GCGTAA TGCTGCCC            TTGTGGTGCCGCGTG  56 57
LQF52_RS10380 2328392 .. 2328409 + -11.3  -3.65426   TCTGCCGTACAATAA             TGGGGTG ATAT CACCCCA              TTTGCACATTTATGG  87 85
LQF52_RS10385 2329360 .. 2329401 +  -7.9  -2.59748   GAAGATAAAGCATTT GCAGAAGAGGTGTATGGCG GTTT CGCCATACACCCATATAGC  TACGTTATAGCCGTG  59 43
        msrB 2332184 .. 2332215 +  -3.8  -2.62616   GTGTGGCAATGACAG      GCTGATAGCGTTTTA GCT TTAAACGAT-TCAGC      TACTGTGAACGCTAC  44 55
LQF52_RS10405 2332572 .. 2332595 + -10.3  -3.76167   ACGCGTAACGTGTGA          GCAGGCAGCC TCATT GGCTGCC-GC          TATTTTCAGTTGTCA  80 33
LQF52_RS10425 2337267 .. 2337301 +  -7.2  -2.94695   CACCCTGTTTTACAG    C-GTGC-TTTCCCGCG AGTTG CGCGGGAAATGCCCAG    TCTGCTTGATGGTGA  59 69
LQF52_RS10430 NONE
LQF52_RS10435 2339578 .. 2339608 + -12.7  -3.68435   TTCTGCAAATTTTAA       TCACCGCTGTG GCTTGGATG CACAGCGGTGA       TGTTATTTTCACCGC  95 71
LQF52_RS10445 2341990 .. 2342039 +  -8.6   -2.9914   TGCTGCAAGATGCTT TCGCTTCAAGCGGGGCGCATCAT ATCAA ATGACGCGCCCC-TGTAAAGCGG TATATATCAAAAATA  66 492
        rssA 2344623 .. 2344646 +  -4.5  -2.84671   GTGCCGTCTATTCGG          CACACTGGC GCTAAA GCAGGTGTG           ATTATTCGGTGTTTG  48 90
        rssB 2345725 .. 2345746 +  -3.1  -5.68438   GGTACGGGTTTCAGG           TAATACC CCTCTTTC GGTATTA            TTTTTTATTTCCTAC  95 57
        galU 2346910 .. 2346929 + -13.6  -5.27779   GTTACCAAAGAAAAA            CCCCCGAT AACT ATCGGGGG             TTTTTTCGTATTCAG 100 125
LQF52_RS10490 2348437 .. 2348461 + -15.1  -2.71731   TACGAGTAATAAAAA          TGCCCAACCTT AAA GAGGTTGGGCA          TCATTGAGAGATAAA  89 106
        oppA NONE
        oppA 2355702 .. 2355730 + -13.2  -4.42386   AGCACTAATAATAAT       GGCTGGC-GCACG CTGT TGTGCTGCCAGCC        TTTTATAGGTACGAG 100 33
        oppB NONE
        oppC NONE
LQF52_RS10520 NONE
        oppF 2359655 .. 2359676 + -15.9  -3.27525   GACTGATGTAAAAAA           GGCGTCTCC TGCG GGAGACGCC            TTACGTTTAAGCGAG 100 54
LQF52_RS10540 2362041 .. 2362064 +   -11  -5.60993   AGCCAGTGAGGAAAA          TAGCGACCCG AGGT CTGGTCGCTA           TTTTTTTATCACACC 100 40
        tonB 2365249 .. 2365278 + -16.5  -4.55544   GATATGAAAAAGAAA       CGGGGCGTCATCT TTGC AGATAACGCCCCG        TTTTCGTTATGTCTT 100 49
        ompW 2368336 .. 2368358 + -11.3  -4.82901   CAACGAATAAAAAAA           CGGCGAAGT AAATA GCTTCGCCG           TTTTTATAGACAGGA 100 68
LQF52_RS10615 2377379 .. 2377410 +  -3.9  -2.79796   CCCGTGTTGGTCGAC     TAGCGGTGCATCATT GCGT AATG--GCATCGCTA      TCTCATGAAATAACA  45 23
LQF52_RS10620 2378120 .. 2378135 +  -6.1   -3.2614   CGCCCGTGAAGGCAC              CGGTG ATGTCA CACCG               TTCCTATAAGCGCTG  57 1
        rluB 2379230 .. 2379249 + -11.4  -4.65819   TATCCTTACGCTTTA            TGGGCAGC TTTC GCTGCCCG             TTTTCATTTCGTTTT 100 47
        sohB 2382086 .. 2382105 + -11.4  -3.87149   CCGTACGTAATCAAA            TGCCCGCG AATT TGCGGGCA             TTTGCATTTAATCGA  91 57
        topA 2385410 .. 2385427 + -12.7  -4.65895   ACATCGCTAAATCAA             GCCAGCC GCAA GGCTGGC              TTTTTCGATCGCAGA 100 82
        cysB 2386742 .. 2386758 + -12.3  -5.04325   AACCAACGTAAAAAA              GCCAGAC AGT GTCTGGC              TTTTTGTCATTTGGC 100 60
LQF52_RS10715 2400786 .. 2400812 +  -7.9  -3.44051   TAAAGACGCGGATAA         CGCCGGTCAGC ATGAC GCTGGTCGACG         TTATCCTGATCGAAG  67 56
        araG NONE
        araH 2403404 .. 2403427 +  -9.6  -4.11235   GGTATAAATCCCTGT          GCGGCAGA TGAATAAC TCTGCCGC           TTTCTCTCATAATTA  81 34
        araC NONE
LQF52_RS10735 2405807 .. 2405828 + -12.3  -3.41726   AGTCATAGATAACTT           TGGGCGATC CTCG GATCGCCCG            TCTTGTTAGGGTGTT  90 279
LQF52_RS10740 2406898 .. 2406939 + -14.6  -3.85817   CGGTCTCTCGCATCA TGCAAAACGCCCTCGGTCT TACAC AGGCCGAGGGCGTTGT-CA TTTGTAACAAACACT 100 49
LQF52_RS10745 2407619 .. 2407638 + -12.2  -5.31456   CAATTGCATATCAAG            CGGCTAAC AAAA GTTAGCCG             TTTTTTATGGCTTGG 100 61
        fumC 2414364 .. 2414387 + -12.4  -5.67529   GCGTTTTATCCTGTA          GCCTGCCGGT GTTT ACCCGCAGGC           TTTTTCTTTTTCATT 100 55
LQF52_RS10785 2417862 .. 2417907 +  -4.3  -2.83903   ACCATACCCGCAGTT TTTTTATT-TTGCAGCGTGA AAAATAG TCATGCCGCAATAATAAAGA TAAATTTTTCAACAG  48 107
LQF52_RS10790 2419253 .. 2419263 +  -5.4  -3.14888   AGCCTAGACTTTCAC                 GCTT GGA AAGC                 ATTTTAGCTGTGCTT  54 99
        bioD 2419991 .. 2420018 +  -8.5  -4.36914   TAATTTCTTTCGTTT        TCTATTCCCGC TTCTCT GCGGGAATAAA         TTTTCTCCGCCACGC  84 38
LQF52_RS10800 2421582 .. 2421595 +  -9.5  -4.13728   AACGGCAAAAGAAAA               GGCGC GAAA GCGCC                TTTTGAACATCTATG  81 39
LQF52_RS10840 2428342 .. 2428353 +  -4.4  -3.99324   TGGATCATCTTCAGA                CATC GGCT GATG                 TTTATGGTCGTAGCG  60 432
        pptA 2432592 .. 2432618 + -10.3  -4.11394   ATAAGCAATAAAAAA        GCCGATAAC-CT GTTA AGAGTTATCGGC         TTTTCACCATGCGGT  82 121
LQF52_RS10880 NONE
LQF52_RS10885 2436581 .. 2436606 +  -3.9  -4.20783   CAGCACCAGAGGAAG         GGGCAGAGATT TTGA AGCCTCTGCCG          TTTGTTAAATCGGAT  62 43
LQF52_RS22200 2438656 .. 2438682 + -17.4  -3.48924   TGACACTTGTTCACG         GTACCGTCGGTG CAG CACTGACGGTAC         TTATATACCCAGTAG 100 86
LQF52_RS10900 2439710 .. 2439725 +  -4.7  -3.38627   CACTGGAGAAAATCG              CTGGT GCCCGA ACCAG               ATTTTGTGTGGTTTT  51 451
LQF52_RS10915 2441242 .. 2441263 +  -3.7  -3.70773   CAGTGATTCTATAAA           TAAGGATTG TAAT CTGTCCTTA            TTGTTAAATATCAGG  53 344
LQF52_RS10955 2448946 .. 2448977 + -13.8  -3.88291   TAATTCTCACTGCCT      TGAGGGAGGCTGGCG TCG CGC-AGCATCCCTCA      TTTCTGCAAATCATA 100 38
LQF52_RS10960 NONE
LQF52_RS10965 NONE
LQF52_RS10970 2456112 .. 2456156 +  -7.3  -5.74122   ACCGCTGTCGATCCA GGAAACATGGCGTGACGTT GTCACTA AATTTTGCGCCATGTTTTC TTTTTTTCTGTCATA 100 51
LQF52_RS10975 NONE
LQF52_RS10980 NONE
LQF52_RS10985 NONE
LQF52_RS10990 NONE
LQF52_RS10995 NONE
        sodC 2461656 .. 2461666 +  -2.4  -4.15833   GCGCTTTCGGGTTAG                 CAGG CAT CCCG                 TTTTGCAATCCTAAT  56 350
         ogt 2465360 .. 2465391 + -13.2  -3.16668   CACACGAAATTGCCC      TCCGAATTGCTTAT CATC GTAAGCGATTCGGA       TTAATCAACGTGTTA  91 57
         fnr 2466506 .. 2466521 +  -4.7  -3.34715   ACTCTTGAATGACAG              GCTGT GGAGTA ACAGC               TGTTTGGAGGAGCTA  52 187
        uspE 2467516 .. 2467541 +   -12  -4.61231   TCGCTCAACATCAAA         TAATGCCAGC CTCCGT GCTGGCATTA          TTTTTGGCGATGTCA 100 55
        ydgH 2472136 .. 2472151 + -11.8  -5.09895   GTTATAAACACAAAA              CCCGCG ATAT CGCGGG               TTTTTTACGTCAGTA 100 75
        lolB NONE
        ispE 2479304 .. 2479344 + -13.3  -2.63723   TGGGCAACGTTAGGT  TTTGCCACACACCGGCTGC CAC GCGGCCAGTCTGTAGCAAA  CTTAATTCATACACC  84 28
         prs 2480429 .. 2480448 +  -9.3  -4.48713   AACGATAATGATGAA            GCCACCT GTAACA AGGTGGC             TTTCTTATTCCTACC  88 68
         pth 2482004 .. 2482027 +  -3.9  -2.55021   ATATTTCCATTCTGA          CAGGCAA GAGATAGTAA TTGCCTG           ATTAATAAGTTATTT  44 102
        ychF 2483211 .. 2483228 + -11.3  -5.50723   CAAAAACCTATAAAA             TCCACGC AATT GCGTGGA              TTTTTCTTTTCATAA 100 88
LQF52_RS11105 2485017 .. 2485035 +  -3.1  -3.04461   GCGATAGCGACACCA            TC-TGCGG ATAC CCGCACGG             TATTGAAAATCCCTG  43 393
LQF52_RS11115 2487479 .. 2487489 +  -6.8  -2.75963   TTTGCTGTTATGGCT                 CGGT AGT ACCG                 CTTTGGCATGCAAAT  52 235
LQF52_RS11130 NONE
LQF52_RS11135 2491859 .. 2491891 + -18.7  -2.82834   TTTTTCATAGATCGG      TTTATCGTCCTCGAA ACG TTCGGGGACGATAAA      TCTCCTCATCGCCTG 100 127
LQF52_RS11170 2499925 .. 2499949 +  -7.1  -4.72863   TGATCAGTTTCTATT          TTGGGGGCG TATTACT CGCCCCAAA          TTTTAATTTGTTTAG  82 372
LQF52_RS11235 2512329 .. 2512358 + -14.4  -3.27109   TTCTACAAATAAAAT       CACCTCCGCACGA TCAAT TCG-GCGGAGGTG       TGTTGATTACATTAA  95 48
LQF52_RS11245 2514891 .. 2514906 +    -9   -3.0263   ATAACAAAACGCTTA              TCGGCA GCGA TGCCGA               TATTGCGCGACTGGT  68 319
LQF52_RS11260 2519166 .. 2519179 +  -3.1  -4.05446   GCGATACTAATCTAC               CAACT AGAT GGTTG                TTTCTGATTGCACCG  57 146
LQF52_RS11265 2519804 .. 2519829 + -13.3   -2.6583   ATCAGAGATGTAATG         CTGCCATCCAG AAAG CAGGATGGCAG          TGACTTTCAGCTCTG  84 42
LQF52_RS11270 NONE
LQF52_RS11275 2520878 .. 2520891 +  -8.1  -5.72616   AATTCCACGTTAAAA               GGGCA TTAC TGCCC                TTTTTTTATGTCCGT 100 50
LQF52_RS11285 NONE
LQF52_RS11290 NONE
LQF52_RS11295 2524157 .. 2524177 +  -9.6  -5.60993   CGTGACGCTGGCATA            AGCCGCCC CTTAA GGGCGGCA            TTTTTTTGTCGCCAG 100 44
LQF52_RS11310 2527960 .. 2527971 +  -3.6  -4.65895   CCTATTCAGTCCGGG                CGCG TCGA TGCG                 TTTTTCGGTCCGCAC  66 441
LQF52_RS11325 NONE
LQF52_RS11330 NONE
LQF52_RS11335 2530943 .. 2530955 +  -3.3  -2.89191   TTAACCCCCAGATTC                TGGAG ATT CACCA                TGTCTGAAGCTATCG  44 37
LQF52_RS11340 2531840 .. 2531863 +  -7.5  -3.37283   AGGCTGAAACACATC          GAGTCAGAG TGCACC TTCTGACTC           TATTTCACACGTTTA  63 86
LQF52_RS11410 2548215 .. 2548225 +  -6.8  -3.53012   ACCTTCCCGGCAATC                 GCTG CGC CAGC                 TTTGCCAGCCAGACC  60 294
LQF52_RS11420 2551378 .. 2551389 +    -3  -4.60797   GATGAAGAAAATGAA                TTCA TGAA TGAA                 TTTTGTCTATCAGCG  65 89
LQF52_RS11425 2552250 .. 2552274 +  -8.6  -4.65078   TGCCATCTTTCTCGG          GGATCCTGTT CATCA AGCGGGATCC          TTTTATTACAGCTCT  89 76
LQF52_RS11430 2554270 .. 2554283 +  -5.2  -3.75153   ACACCAAGCCAGCCC               GGCG TGGGTT CGCC                TTTCGCTTCACCGAC  58 271
LQF52_RS11445 2557783 .. 2557822 +  -9.3  -2.64099   AGCTTGGTTCGTCCA  GCGATTCTGCG-GTGTGC TGAGT GCACAAACGCAGCGTCGC  ATTCTCATCCAGCGC  59 150
LQF52_RS11460 NONE
LQF52_RS11465 2565022 .. 2565046 +  -9.9  -4.26871   CCGCATCAGGGAAAA          GCCAGCCTGGG AAA CCTGTGCTGGC          TTTATTGCTCCATTG  84 55
LQF52_RS11555 2581740 .. 2581752 +  -9.1  -3.46068   CAGAAACTTTTCAAT                CCGCT TTA AGCGG                TCTTTCAGTTGCAAA  66 255
        sctW NONE
        sctV NONE
LQF52_RS11590 NONE
        sctN NONE
LQF52_RS11600 NONE
LQF52_RS11605 NONE
        sctQ NONE
        sctR NONE
        sctS NONE
        sctT NONE
        sctU 2596887 .. 2596925 + -10.3  -3.99324   GATACCCGGAGCGAC  CACGGGG-CGAGGCATCCC TGC GGGAA-CCTCATCCCCGTG  TTTCTCCTAATCAGC  82 70
LQF52_RS11640 2599666 .. 2599679 +  -4.5  -3.78922   TGACATATTAATGAT               GCCAG CCAG TTGGC                TTTGACTAATTTTTT  58 239
LQF52_RS11680 2607024 .. 2607034 +  -2.4  -5.10516   TTATCGCGTTATTAT                 CCTC ACC GTGG                 TTTTGTTTCATTTTT  71 135
LQF52_RS11685 2608876 .. 2608926 +  -4.7  -2.73243   AATCCCCTCGCCTTT TTCA-CGGCACCCGCGCGCG ATTGATTATTCC TACGTGCGGGTGCCGATGAC CTTTAACACGTCGCT  47 39
LQF52_RS11735 2620675 .. 2620687 +  -4.1  -2.88945   CTCGCTAAGCATCCG                GCATG GTT TATGC                ATTCTTATGAATAAC  46 167
LQF52_RS11740 2622116 .. 2622135 +  -3.6  -4.40601   TTTTAAGTTTCAGTC            ACGTTATT CAAT AATAACGA             TTTATTCTGTAACTT  62 322
LQF52_RS11745 NONE
LQF52_RS11750 NONE
LQF52_RS11755 NONE
LQF52_RS11760 NONE
LQF52_RS11765 NONE
LQF52_RS11770 2628000 .. 2628011 +  -4.4  -2.55015   CAACACCAGCTTTAC                TTGC AGTA GCAA                 TAAATTCCATACAAT  46 524
LQF52_RS11780 2629722 .. 2629734 +  -7.7  -5.00895   CCGTTGTCTTTCAGT                TCCTG GAG CAGGA                TTTTTCTGTCCTGCG  91 220
LQF52_RS11790 NONE
LQF52_RS11795 NONE
LQF52_RS11800 2633655 .. 2633680 +    -9  -2.87243   ACATCATCGGTCATA         CCGCCCGA GCTGAACACG TCGGGCGG          TCATTGTCGTGCTAC  67 52
LQF52_RS11815 2635817 .. 2635853 + -18.3  -2.51642   ATGAAAAGGAAACGA    TTAAAACAGCAGCGTTA TCA TAACGCCGCTGTTTTAA    ATTGATGACTGATCT 100 82
LQF52_RS11820 2637170 .. 2637180 +  -2.4  -3.03124   TACGAGGGCATCACA                 GCCC GAA GGGA                 TGTTGAGAACTCACC  42 146
        narX NONE
        narL 2649010 .. 2649025 +    -6  -3.06133   TCAGCGGTACGGATA              AGGCGC TCTG GCGCCC               TTCCGTCCGAGATTA  56 68
LQF52_RS11860 2650764 .. 2650777 +  -5.2  -3.47322   TTAATGTTTGCCGTT               CCGG ACTAAA CCGG                TTCGTTATCATCGGC  56 239
LQF52_RS11865 2651914 .. 2651947 + -10.3  -2.74012   TTGCTTTACATTGCT     TCAAGGTGAACGGCG ATCT CGTCGTTCACCTCAA      TGCTTCCACTCATCG  71 46
LQF52_RS11875 2654134 .. 2654157 +  -3.9  -4.59424   GATATTATCATGATA          GGGAGAA GATACGCAGA TTCTCCC           TTTTCATTTGAATTT  69 58
        chaA 2655638 .. 2655657 +  -4.8  -2.62098   CGTAAGGCTGTCGTC            GACGGACC GGCA GGCCCGCC             ATATTGATTTACTTC  48 133
        dauA 2657424 .. 2657455 +    -8  -3.08679   TAGAAATAGTCTGCG      GGCCACGCCGTGC TAATGCT GCACGGC-TGGCA      TCTTAAATCGGACGG  62 52
        folM NONE
LQF52_RS11900 NONE
LQF52_RS11905 2660067 .. 2660107 +  -8.2  -3.91858   TGGCCTAGCCATTGA CG-CTCCCGCCACTCGCTG ATTC CCCTGAGTGGCGGGACACG  TTTATGCGGTGTGTC  72 33
        rstA NONE
        rstB NONE
         asr 2665004 .. 2665021 + -12.7  -4.49556   AGAACAATCATCAAA             CACCCGG TTTA CCGGGTG              TTTATTTCATGGGGG 100 125
LQF52_RS11935 2665648 .. 2665677 + -11.5  -4.62069   CTGCTGATATGAAAA       TGTGACGCCAC TTCAGATC GTGGCGTCGCA        TTTTTCGCATAGGGA 100 61
LQF52_RS11940 2666723 .. 2666775 + -10.2  -3.78775   CGCAGAAACGCACCG TCAGGCGGAAACCGGT-AT-TCAGG ATACCG CCTGACATCACCGTTTTCCGCC-GA TTTCATGGTACAAAA  80 52
LQF52_RS11945 2668947 .. 2668964 +  -2.5  -3.01791   CAAACGTCTACATAA             CCCCCCC TTCA GGCGGGC              TATTCAACCAACGGT  43 26
LQF52_RS11950 2670131 .. 2670149 +  -5.8  -4.18018   ATAACGCAGCACATC             CGGCAGAC GCT GCCAGCCG             TTTTCGGTCACAAAG  67 324
LQF52_RS11960 2674696 .. 2674713 + -14.1  -5.06016   CTTGGCTTGACTATT             GCGCGCC CTCC GGCGCGC              TTTTCTTTATCTCAT 100 74
LQF52_RS11975 2679489 .. 2679501 +  -6.2  -3.56541   GGGCGCTCATATCAG                GGCG TCCGT CGCC                TTATCTCCTCGTCAT  60 57
LQF52_RS11980 2681408 .. 2681431 +  -6.1  -3.85698   CCTCTCAATTTCAAA          CCGTTA-CTG TCAGT CAGGTAACGG          TTTGTCACCGCCCGA  64 55
LQF52_RS11985 2682864 .. 2682874 +    -4  -3.35542   GTTTGACATCAGCAC                 CTAT CAA ATAG                 ATTTTTCAGACTAGG  50 407
LQF52_RS11995 2683674 .. 2683716 + -14.3  -4.71223   AAATAGTTCAATCAA TGACGCTACGGCTAGTG TATTTATCT CACTAGCCGTAGCGTGG TTTTATATCTTCTAC 100 39
        ttcA 2685011 .. 2685050 +  -8.7   -5.4756   CATAACGAATAGAGA CACGGTGGCAAGAAGCAGC GGTT GCTGTTTCA--CCACCGTG  TTTTTTATTGCCGTT 100 72
        mpaA 2689415 .. 2689429 +  -4.3  -4.33708   AAAGCGATGGTGGCA               TTGCT AAGCC AGCAA               TTTTAATCGTAATTT  66 5
         tpx 2690038 .. 2690065 + -12.8  -4.09455   CACTGGCATTACGTG        AAAAACGGCTGC GCAA GCAGCCGTTTTG         TTATTTACTCTTCGT 100 45
LQF52_RS12050 NONE
LQF52_RS12055 NONE
LQF52_RS12060 NONE
LQF52_RS12065 2706964 .. 2706989 + -14.1  -3.36273   GCCTTTATCATATTG         CA-CTCCCCACC TCT GGTGGGGAGCTG         TTAGTCTTAAAAAAC 100 70
LQF52_RS12070 2707802 .. 2707812 +  -4.6  -3.52918   TCGCTGGCCTGCAAC                 GTCG CAT CGGC                 TTCATTTAGCAATTG  52 209
        pspF 2710422 .. 2710439 +  -4.1  -3.93369   TCGTGACGTTAGCGC             CGTATGA ATAG TCATTCG              TTTCATTCACGTTGC  58 183
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF NONE
        fabI 2719687 .. 2719709 +   -15  -3.32844   AGTAAGTCATCAAAA           GTAGCCTATC TCG GATAGGCTAC           TTCTCCCCTACAAAG 100 36
LQF52_RS12140 2720655 .. 2720682 + -13.6  -4.89063   ATAGCATTATAAAAC        TGGATGACCGAT TTTT ATTGGTCATCCA         TTTATTTTTGAATAA 100 57
LQF52_RS12165 2730347 .. 2730357 +  -8.2  -3.14211   ATCAAAGAAGTTCTG                 CGCC AGC GGCG                 TTGCTCGGCCAGCCT  60 271
LQF52_RS12175 2733856 .. 2733901 +  -9.1  -2.53876   CAATTCATCACATCA ACTACTCTGCCGTGC-CGTGA GATCAA TCGCGTGCACGGCAG-GTGGA TACATTCGAATCAGC  65 60
LQF52_RS12180 NONE
LQF52_RS12185 2737022 .. 2737034 +  -5.5  -2.79004   CTCTGAATTTCCCCC                GGCAG AGT CTGTC                ATCTTTTCACGCTAA  50 78
LQF52_RS12190 2739310 .. 2739328 + -10.3  -5.24129   GCGTATATCTCTCAA             TCCCTCC CTCGC GGAGGGA             TTTTTTATGGCCGCC 100 50
        osmB 2740726 .. 2740755 + -15.1  -4.17516   ATAACGAATTTGTGG       GCAGCAGGTTAAC GGGA GTAAACCTGCTGC        TTTATATGCTTTAGC 100 37
LQF52_RS12225 2744777 .. 2744787 +  -4.6  -4.43844   GCACAATCCGCTGCG                 CCTG TAA CGGG                 TTTTGTGCCTCCTGC  68 160
        ribA 2755651 .. 2755671 + -15.5  -4.65916   TTCTTTCAATGCTCA            CAGCCGGTT TTT AACCGGCTG            TTTTATTGGGATCAG 100 66
LQF52_RS12290 2758558 .. 2758572 +  -4.2  -4.14392   AAATCTGCTCGTCCC               CGGTGA GTT TCAGCG               TTTTACGCGTTACCC  62 287
        gstA 2764120 .. 2764144 + -16.5  -2.74605   AAGGCTAACATGCAA          TAACGCCCCGG TAT TCGGGGCGTTA          TACGTTTTACGACAG 100 33
LQF52_RS12335 2769823 .. 2769842 +  -4.2   -4.0127   ATAACCAATAATCGA            TACCGGTA ATAT TGCCGGGA             TTTAATTCTCCCTCT  59 105
        gloA 2771493 .. 2771513 + -13.3  -3.57629   GACCGCCGCATTCTA            CAGGTGCTG CAT CGGCACCTG            TTCTCTCCCTTCTTC 100 41
         rnt 2772707 .. 2772726 +  -3.6   -5.1925   CAGCAGAATCGGGTT            TTCAGC AATTTGGC GCTGAA             TTTTTTCAATTGTCG  81 435
LQF52_RS12365 2774091 .. 2774104 +  -5.3  -2.73681   AGGAATCCCGATGAG               CTTAC TCAA GTAAG                TGATTCGGGTGACTG  49 172
        purR 2775931 .. 2775951 + -12.7  -3.73775   AAGGCTGGCCTTCGG            TGAGAGACA GGA TGTCTCTCA            TTTCATCCCGATGAG 100 215
         cfa 2777422 .. 2777443 +  -2.1  -3.77831   TCGACGGTATCCACC           ACGGCCTGT GTTT GCGGGTCGA            TTTCAATATTGATAC  52 152
LQF52_RS12390 2779869 .. 2779906 + -12.3  -4.20696   ACCCCAGCAATCGCG   CTGGCAAGAGCACAAAAT TGC ATTTT-TCCTCTTGCCAG   TTTTCCCCTTGCTCG 100 284
LQF52_RS12395 2780325 .. 2780361 +  -7.3  -3.94846   GGCTGGCAGCGGATC   TCCCGCACTGTGCCGC ACTGCG GCGACACAAT-CGGGA    TTTCCATTTTCATCG  71 308
LQF52_RS12440 2789307 .. 2789351 + -13.6  -2.51547   GGTCGCGCAGCAAAA ATGATGCTCCCCGCGCC-GTG AAAA CACCGGCGTGGGGAGCGTAAC GTCTTACTCTGCCAG  86 50
LQF52_RS12455 2794186 .. 2794212 +  -9.4  -4.10552   CCCATCGTCGTCATT         GCTGCGGGCAAT AAA ATTCGCCGCAGC         TTTGGTTTCCTCAAA  80 121
LQF52_RS12470 2796559 .. 2796574 +  -2.6  -2.63252   GCATCAAAAAAACCT              TTAATG TTCT CATTAG               GTATTATTGCAACCT  40 373
LQF52_RS12475 NONE
LQF52_RS12480 2797913 .. 2797926 +  -2.4  -3.84719   AAACTAGAAAAATCA               GTCA CAAAGA TGAC                TTTCCATTTCAAAAT  51 43
LQF52_RS12485 2798408 .. 2798418 +  -5.4  -3.53012   ACTCCAAGCTAATCT                 GATG TCT CATC                 TTTCAGACAACACCG  57 65
        napF NONE
        napD NONE
        napA NONE
        napG NONE
        napH NONE
        napB 2806423 .. 2806433 +  -5.4  -2.73124   GGTAACACGTTCGCC                 CCTT CTA AAGG                 CTTTGGACAGTGAGG  50 2
        napC 2807046 .. 2807063 +  -6.9  -2.83073   ATGCACGGCGTCAAA             AGCGGGT TATA ACCCGCA              CTTCTTAGTCACACT  55 14
        pykF 2832718 .. 2832732 +  -8.5  -5.84432   TCAGATCGGTAAAAA               GCGCC TTAAT GGCGC               TTTTTTTATATTCTG 100 50
LQF52_RS12650 2833267 .. 2833285 + -14.6  -5.81412   GTTAAGTCGTGAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGCCTGCG 100 49
LQF52_RS12690 2841690 .. 2841720 +  -6.9   -2.8742   ATTTTCTCAGAACAA       CCGAACCAGAC CCGCCAGCA GTCTGGTTCAG       TGCTTCATGTTTACA  56 49
        ydiK 2846642 .. 2846663 + -17.3  -3.15583   ACCGTTTTCTCTTCC           CGTGGGCGG TACA CCGCCCACG            TATTCCCTCTCTTGG 100 52
        rprA NONE
        apbE 2848237 .. 2848275 + -17.7  -3.60805   GATACACGGGGCGAC  CACGGAG-TGAGGTATCCC TGC GGGA-ACCTCATCTCCGTG  TTTCCCCTAAAATCT 100 83
LQF52_RS12725 2851938 .. 2851950 +  -3.3  -3.14848   TCCCGGCATTTCGCC                GCTGC GAA GCAAC                CTTTTAGTCGGAAAC  46 111
LQF52_RS12730 2853112 .. 2853146 +   -10  -2.53022   TTTTAACCCTTACGC     GCTGGCACACTTCC TTTCCCC GGTGGTGTGTCAGC     CATTTTCCTGCTTTC  70 35
LQF52_RS12735 NONE
LQF52_RS12740 NONE
LQF52_RS12745 NONE
LQF52_RS12750 2857307 .. 2857323 +  -2.1  -4.26188   ATTCATCACGAAGCG              GCGAGCG CGA TGCCTGC              TTTTCGCTGTCTGCC  60 358
LQF52_RS12760 2859917 .. 2859929 +  -4.9  -4.43477   TTTAAAAACACATCA                TTTTC AGG GAAAA                TTTTAGTTAAATCAC  68 129
LQF52_RS12800 2866683 .. 2866704 +  -6.7  -3.14132   ACGCCGCGATGTTGC           CATTCGATCA GCT TGA-CGAATG           TTGCTGCGGCAACGA  59 360
         mfd 2875402 .. 2875421 + -13.6  -3.49475   TTTCACCACACTAAA            CGGGAACC TTCG GGTTCCCG             TTATATACCAATCGC 100 46
        yegD 2879568 .. 2879585 +  -5.5  -3.34962   GCAGCAGCGACGCCG             GAAGCCT TCCC AGGCATC              TTCTGCGGTATCGGA  53 404
LQF52_RS12855 NONE
LQF52_RS12860 2882416 .. 2882445 + -14.4  -4.60487   CGTACAATGAAAAAA       CCGCGAG-CACCT TCTTC AGGTGTCTCGCGG       TTTTTAGAGATGGTG 100 31
LQF52_RS12910 2891709 .. 2891722 +  -9.5  -4.59773   CTGACCATAAAAAAA               GGGGC TTTC GCCCC                TTTTTACCACTCCCC  91 48
LQF52_RS12985 2905159 .. 2905175 +  -2.9  -3.95435   GCCCGCACCAGCGTC              GCGTGTT CAA AACGCTC              TTCTATTTTAAAGCG  56 376
         rne 2909831 .. 2909850 +   -15  -5.36441   GTTTCTATAGACAAA            CACCCGCC AATT GGCGGGTG             TTTTTTATGTACAAC 100 46
        pyrC 2911395 .. 2911419 + -14.3  -2.80345   TCCGTTAACCGACAA          GCCCATCCGCA TTG TGCCGATGGGC          TAAATTTTATCGCCT  87 33
        dinI 2911773 .. 2911787 +  -5.6  -2.75521   ATATAGGCTGTAATG               GCAGCT TAA AGCGGC               ATTTCGCCATGTGCT  50 65
LQF52_RS13015 2912108 .. 2912133 +  -9.8  -3.50588   CTGTTAACAACACCT         TCGGGATGAA AGTCTA TTCGTCCCGA          TATTTCATCTGACGT  75 54
        bssS 2912623 .. 2912653 + -14.2  -4.14874   AAGTTTCTTAAACAA       TAACAACACCGC CAATAGC GCGGTGTTGTTA       TTTTAGGGCTATTCT 100 80
LQF52_RS13025 2913564 .. 2913578 +  -3.4  -3.34113   GTTGAAACGGATGTT               GGGTCG CAA CGTTCC               TTAACTTTCTGGATT  48 7
LQF52_RS13030 2914215 .. 2914235 + -15.5  -5.06816   CATCAACACGACACA            GCCCTTTCC ATT GGAAAGGGC            TTTTTATTGCACGAT 100 53
LQF52_RS13040 2916634 .. 2916644 +  -6.8  -4.08767   TAGTGAACCACGCTA                 TGCC AGA GGCA                 TTTTCAAACAGTAAC  70 1
LQF52_RS13045 2917898 .. 2917921 + -13.2  -4.33258   ACAGACGAAAAAAAA          GCAACGGCGA TTGA TTGCCGTTGC           TTTATCTTTCACACT 100 82
LQF52_RS13060 2922999 .. 2923022 +  -6.7  -3.93708   ATTTATAACGCATCG          CGCTATACC CTTTCA GGTGTGGCG           TTTGATCATTTCTTT  68 66
LQF52_RS13065 2924770 .. 2924783 +  -2.3  -4.83032   TTAGGGGCAGCCAGC               GCGGG TGTT TCTGC                TTTTCTATTTAATGT  68 211
LQF52_RS13085 2928333 .. 2928343 +  -2.4  -2.82681   GCATGATGACTCAAT                 GCCG CAA CGCC                 TATGCTCACCTTTTA  40 67
LQF52_RS13090 2929263 .. 2929276 +  -3.1  -4.08216   ATGAAAGAGGTGTAT               TG-CGG CAC CCGACA               TTTTAGCCAACCTGA  58 407
LQF52_RS13115 2932139 .. 2932160 + -10.1  -3.58247   TAGCAGAAACGAAAA           CGGGCTAGC CTAA GCTAACCCG            TTGAATTTTTTTGGC  78 383
LQF52_RS13120 2932879 .. 2932889 +  -5.4  -2.71712   CTGACGTTGACGACG                 CATC GCA GATG                 ATTTGCGCACCAGAC  47 322
LQF52_RS13280 2960168 .. 2960184 +  -8.7  -3.05816   TCGGCACGTTGATAG              CGACGGA ATA TCTGTCG              TTAAGTGCGCGGTGC  63 244
LQF52_RS13360 2970605 .. 2970620 + -10.4  -5.38047   CTGCAAAAGACAAGA              TCCCGC ACCT GCGGGA               TTTTTTGTGTCCGTA 100 63
LQF52_RS13365 2971371 .. 2971382 +  -7.2  -3.42395   TGGGAAATCAACCAG                GCGC AGTT GCGC                 TGTTTGGGTAATACG  65 387
LQF52_RS13375 NONE
LQF52_RS13380 NONE
LQF52_RS13385 2975022 .. 2975066 +  -5.7  -4.59773   ATAGCGAGGCAAGAC CAATGCTAAAAATGTCCGCGC AGC GCGGGGACGTTATTCATATTG TTTTTGCGGATGGCC  74 55
LQF52_RS13390 NONE
LQF52_RS22205 NONE
LQF52_RS13395 NONE
LQF52_RS13400 2976710 .. 2976731 + -10.1  -3.41587   AGCCAAAAACGAAAA           CGGGCTAGC CTAA GCTAACCCG            TTGAATTTTGTGGCG  76 100
        yccA 2978260 .. 2978275 +    -4  -4.07687   TCTCGCGCATTTTTA              CGGTACA TCC TGT-CCG              TTTTAGGGAAGCGCT  60 508
        tusE 2979776 .. 2979786 +  -6.8  -3.37902   ACACCATAGACATAA                 GCGA CAG TCGC                 TATCTTTGTCATCTT  58 294
        hspQ 2980375 .. 2980401 +  -5.8  -2.69647   CTAAAGACAAATATT         GGCGATGTGG TGGTATT CAGCATCGCC         TACTATCTGCAACTT  50 69
LQF52_RS13440 2981613 .. 2981629 +  -5.1  -2.74597   TTTTATCGCTTTGCA              CTGAAAC TAC GTTTCCG              TAATCTGTCTATACC  49 91
LQF52_RS13445 2982162 .. 2982194 +  -9.9  -3.47462   CAGCACATCATAATG     GACCAGCGACG-CA CTACGC TGTCGACGCTGGTC      TCTTCTGTTCTACTT  75 44
LQF52_RS13455 NONE
        yccS 2987532 .. 2987546 +  -5.8  -2.96249   GGCATATCACGCTGC               TGAAAA TAT TTTTCA               TCCTTCTTACTGGCG  51 479
        sulA 2988493 .. 2988516 +  -5.3  -4.75356   TATGTCTTATCGATC          GC-CGCAGAG CGGTA TTCTGCGGGC          TTTTTGGGTATATTT  75 75
        ompA 2989909 .. 2989924 + -10.4  -5.60993   TATTAACGAAAAAAA              CCTCGC TCCG GCGAGG               TTTTTTTATGCCGGA 100 43
LQF52_RS13485 2992497 .. 2992514 +  -4.8  -3.33696   GCCCAGCGTACAGGT             GTACGC TAACCT GCGTGC              TTCATTAAAACAAGG  54 72
        fabA 2993075 .. 2993100 + -15.5  -3.53841   AGCACCAGATAACAC         TGCGGGCGAAA AACC TTTCGCCCGCG          TTATCCGTTTATTTC 100 40
LQF52_RS13515 3000195 .. 3000215 + -12.6  -4.68424   TAATCCCCTACGCTA            TGGCGCTG AAATA CAGCGCCA            TTTTTCAATACGTTA 100 38
LQF52_RS13520 3001060 .. 3001082 + -14.2  -5.93809   ATAGCTGACAAAAAA           CCACAGGCCA TCA TGGTCTGTGG           TTTTTTTTATGCCAA 100 48
LQF52_RS13525 3001359 .. 3001382 + -16.8  -5.67967   CCATATAAAAGAAAA          CGCCGCTGAT GCAA ATCAGCGGCG           TTTTTTTATGCTGGT 100 38
        fliD NONE
        fliS NONE
        fliT 3016284 .. 3016301 +  -5.6   -4.1552   CATATTCATCACTTC             CTGGTA CGCTGA TACCAG              TTTATTACGCACCTG  67 199
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
LQF52_RS13620 NONE
        fliL NONE
        fliM NONE
        fliN 3025433 .. 3025443 +  -2.4  -3.15544   TCCGAACGTATGCGC                 CGCC TGA GTCG                 TTAATGGCAATAGCC  44 11
        fliO NONE
        fliP NONE
        fliQ NONE
        fliR 3027768 .. 3027784 +  -2.1  -3.59315   CCGACGTTAGGCCAC              TGCGGAC ACC GCCCTCA              TTTCAACATCCTTAC  49 64
        flgA 3039173 .. 3039187 +    -5  -3.11222   GATGATAGTTACAGA               GTCATT ACT GATGAC               GTTTTAAAATTGAAC  51 68
        flgM NONE
        flgN 3040014 .. 3040036 +  -9.2   -4.2349   AATTGCATTCTAAAA           GTCTCTGC GTTTTGG GCAGAGAC           TTTTGACTATCGAAA  82 28
LQF52_RS13805 3058840 .. 3058859 +  -2.1  -2.52464   AATCCCTTCCTGAAA            CGTTTCT ACAGCA AGAATCG             TCCCTTCACGGCGCG  38 219
LQF52_RS13815 3060555 .. 3060566 +  -2.2  -3.76393   ACTATTCTATCTTAT                TGCA AACC TGCG                 TTTCAGTTCACATCT  51 40
LQF52_RS13820 3061245 .. 3061257 +  -3.3  -4.03413   ACAAGAACACTTGCA                GGTGA TGT TCCCC                TTTCTCTAGCACAAT  57 236
LQF52_RS13855 NONE
LQF52_RS13860 NONE
LQF52_RS13865 3077151 .. 3077162 +  -2.2  -4.39448   GCGGTCTACGACATT                GCAT ATAA GTGC                 TTGTTTTAATTCTTT  59 391
LQF52_RS13885 3079073 .. 3079083 +    -4   -3.2327   CTAAGGCATAATAGG                 GTTT TAT AAAC                 TTGCTAGTGCATTAA  48 30
LQF52_RS13905 3081401 .. 3081412 +  -4.4  -3.03619   ACTGCATTGAATACG                GTTG CGTA CAAC                 TCTTCGAAAGTAATT  47 52
LQF52_RS13915 3082031 .. 3082050 +    -3   -3.6715   TATCACCATGTTCGA            TGATG-AAT TTA ATTACATCA            TTTGGAATTACATAG  51 116
LQF52_RS13925 NONE
LQF52_RS13930 NONE
LQF52_RS13935 NONE
LQF52_RS13940 NONE
LQF52_RS13945 3083725 .. 3083735 +  -2.4  -4.21607   TTTTTAAAGGCGTAA                 ACCC GCC GGGC                 TTTCTATTACCTGAA  57 56
LQF52_RS13950 3084048 .. 3084070 +  -6.2  -3.26444   GGTAAGAATCCCCGC           GCACCCATTG CTT CTATCGGTGC           TGTGTTCTTCAACCC  57 70
LQF52_RS13960 3085801 .. 3085819 +  -2.3   -3.4252   AATGGCCGCTTCCGG             CGCGTTC GATGG GGAGGCG             TTCTGATGCGTCCCG  47 1
LQF52_RS13965 NONE
LQF52_RS13970 NONE
LQF52_RS13975 3089911 .. 3089932 + -13.7  -3.93695   TGCTATTATCCCCTT           CCCGCGCCA GTTC TGGTGCGGG            TTTGTCCCTGCTGCA 100 113
LQF52_RS13990 NONE
LQF52_RS13995 NONE
         gpM 3095962 .. 3096020 +  -6.2  -3.67634   CGTGCCCCCGCGCAC CAGGC-G-GCACGGCGTAAGACGG-GCAA TGTA TTGTGTCGTGTTACGTCGTCCACCGCCTG TCTTTTGAGGTAATG  62 46
LQF52_RS14005 NONE
LQF52_RS14010 NONE
LQF52_RS14015 NONE
LQF52_RS14020 NONE
LQF52_RS14025 3097918 .. 3097932 +  -5.6  -2.55015   ATAGTCAATAACCGT               CTGACC TAC GGCCAG               TCCGTTGGCTGGAAT  50 30
LQF52_RS14030 3098498 .. 3098514 +  -2.1  -3.22298   GCCAACACAGTTATT              CATGACG CTA CGGCAGG              TTAGTGATGAGTGAA  44 5
LQF52_RS14035 NONE
LQF52_RS14040 NONE
LQF52_RS14045 NONE
LQF52_RS14050 NONE
LQF52_RS14055 NONE
LQF52_RS14060 NONE
LQF52_RS14065 3103858 .. 3103888 +  -9.1  -2.78211   GTTCATAAATGTAAA       GTGGTTGCATCTC ATAGC GAAATGCAACTAC       ATATTTTAAGCAAAT  66 33
LQF52_RS14105 NONE
LQF52_RS14110 3112555 .. 3112584 +  -4.3  -3.10894   TCTATAAATCATTAA       GCGCCAGAAACTAA AGG TTAGTAA-TGGCGC       TTAACTACTGGTACT  49 34
LQF52_RS14150 3117735 .. 3117772 + -12.1  -2.86011   AAATAGCACTATTTG   CTACACCGCCATCTTAA TAAT TTGATCTGGCGGTGTAG    TGATATTTAGCCTTG  80 35
        cycA 3120417 .. 3120437 + -12.5  -3.58247   TATAAACGCAAGAAA            GGCGCGGAC AAC GTCGGCGCC            TTCAATTTTTTTCAG  95 45
LQF52_RS14180 3122040 .. 3122059 +  -2.8  -3.79519   GATGCATTTTTAGTT            TTCCCTCCG CAT CGG-GAGAA            TTTGGTGGTCAGATT  52 115
LQF52_RS14185 3123402 .. 3123425 + -11.1  -4.11216   ATAACACCCTTAAGA          GCAGATCCT GATCAA AGGATCTGC           TTTTCAGACTGCGAG  86 44
LQF52_RS14200 3124830 .. 3124855 +  -5.5  -3.27022   ATTCCGCATCATCAA         TTGGTTCGTTAG TTA CTT-CGAACCAA         TTGATATGCCCTGAA  54 106
LQF52_RS14205 3126139 .. 3126153 +  -7.8  -3.12936   ATTAAGGATTGTGGT               GTCCGT AAT ACGGGC               TCTTCAACTTTCACT  62 86
LQF52_RS14210 NONE
LQF52_RS14215 NONE
LQF52_RS14220 3127242 .. 3127269 +   -20  -5.64873   TAAAGGGATGACCTA        CGCGCAGAGAAG TTAC CTTCTCTGCGCG         TTTTTTATTATTAGG 100 41
LQF52_RS14255 3134333 .. 3134344 +  -2.2  -2.75825   ATCGACTATCTGATG                GCTA CGTG TGGC                 TAGATTTGTTACCGA  40 70
LQF52_RS14260 NONE
LQF52_RS14265 NONE
LQF52_RS14270 NONE
LQF52_RS14275 NONE
LQF52_RS14280 3139049 .. 3139063 +  -2.1  -2.64561   TTGAATTAAAGGGGT               CATCT ATGTC AGGTG               GTATGTTTGTTGGAA  39 32
LQF52_RS14285 3140136 .. 3140148 +  -4.7   -4.2074   TGCCGTGGCAACCGC                CGCCG GTA CGGCA                TTTCTGTCTTCGACA  64 67
LQF52_RS14290 NONE
LQF52_RS14295 NONE
       virB9 NONE
LQF52_RS14305 NONE
      virB11 NONE
LQF52_RS14315 3144668 .. 3144681 +  -9.5  -3.04398   CCCATCTGCAAACAG               CCGCG CCCA CGCGG                ATTTTGCAGACCGGG  71 227
LQF52_RS14320 NONE
LQF52_RS14325 3147965 .. 3147999 +   -13  -2.71681   ACGGTGACGAGTTCA     TACTCACATCTCCTGC GCT GTGGGAGATTTGAGTA     TGGTTGCAGACATTG  85 179
LQF52_RS14355 3154100 .. 3154115 +  -6.2  -3.99592   TAAAATAACAAGGAA              TATGCA AGGA TGCATA               TTTCTCATACTGAAT  66 38
LQF52_RS14360 3156799 .. 3156824 + -17.7  -5.69262   GCCAAATTTAGAAAA         CCCCGCTTAAG GAAA CTTAAGCGGGG          TTTTTGTTTTTATCA 100 361
LQF52_RS14365 3158380 .. 3158402 + -13.4  -3.35849   GATCGGCCATGGCAT           CGGAAACCCC TTC GGGGGTTCCG           TATTGGTTTAATCAA  95 40
LQF52_RS14390 3166493 .. 3166510 +  -4.1  -3.29511   TCATTCGATGTTGCA             GAGTGAT GGGT ATCTCTC              TTATGGAACAGTCAA  50 277
LQF52_RS14395 3167861 .. 3167883 +  -4.8  -3.10012   GTAGAATTTATGGAA           CATCTGTTCG GAA CAGACAGGTG           TTCCCTCCTCCCCTT  51 56
LQF52_RS14400 3169122 .. 3169136 +  -2.7  -4.07885   CGTGACGTATCTTGG               GCAGC AGTTG GCGGC               TTTTAGGCCACAGTG  58 88
LQF52_RS14410 3170828 .. 3170842 +  -2.8  -5.00616   TTACATCTTTTGATT               TTCATC TTC GCTGAA               TTTTTTCAGCGCGAA  70 240
        lepA 3172768 .. 3172796 + -13.1  -2.70704   AAAAAGCACAACGGT        GGGCGGATAGAAC GAC GCGCTATCCGCCC        CTTCGTTTCCCCACT  85 68
LQF52_RS14420 3174644 .. 3174658 +    -7  -3.03124   GCCTGTGAAAACAGC               GTCGCC GCA GGCGCC               TCTTCAACAATGCGC  54 246
LQF52_RS14455 NONE
LQF52_RS14460 NONE
LQF52_RS14465 3185171 .. 3185217 + -16.7  -3.62275   CGATCAATAGCGGCA TATCGACAGGTCGTGGCGACCA CGCA TCG-CGCCACGACCTGTCGACG TTTCACCTACTGCGT 100 31
LQF52_RS14485 NONE
LQF52_RS14490 3192575 .. 3192598 +  -2.5   -2.9006   ATTTCGCTATAAGTA          TTTCGCT ACTCTGCATG AGCGAAA           TATATCGCCTCGATT  42 279
LQF52_RS14495 3193956 .. 3193968 +  -9.1  -3.66908   TCCATAAAATCAGCG                GCCAG CCT CTGGC                TTCCTTTTACCCGAA  70 508
LQF52_RS14505 NONE
LQF52_RS14510 NONE
LQF52_RS14515 NONE
LQF52_RS14520 3198395 .. 3198418 +  -5.2  -3.60792   ACTTAGGTATACGTT          GCTGTTGTGT TGCT GCGCAACCGC           TTTGACGATTGCCAG  55 95
LQF52_RS14535 3201621 .. 3201635 +  -2.8  -3.63744   GATCTAACTCACCGT               GATGTT TAC AGCGTC               TGTTTTGGCACCAGG  50 221
LQF52_RS14570 3210881 .. 3210907 + -11.6  -2.60392   TTTTTTCCACTTCCG         CGTGAGGAAACC TTT GGCTTCTTCACG         GTTGGTTGCAAACTC  68 430
LQF52_RS14590 3213737 .. 3213750 +  -2.4  -2.75577   TCGACGCCATTCTGT               CTCA ACCCGC TGAG                TAACTTTTCGCATCA  40 9
LQF52_RS14595 NONE
LQF52_RS14600 3216844 .. 3216861 +  -5.5  -3.14132   CGATCGAGAAAGAAA             GCCGCAA TCTC TTTCGGC              TTAGTCAGGCCGGAA  50 382
LQF52_RS14630 NONE
LQF52_RS14635 3223389 .. 3223438 +  -3.7  -4.74132   CGTTAGCGAAAGGAC GTGAGCGCTGCCTGACTGACCTT CCTCGT AAGGGCA-TCAG-CAACGCTCAG TTTTTAGTGCGGTAT  71 49
LQF52_RS14675 3236115 .. 3236129 +  -5.6  -4.39828   TATTCTGGCTCATCG               CCATGC GGC GCAGGG               TTTTGTAGGCCTCTT  70 231
LQF52_RS14685 NONE
LQF52_RS14690 3240082 .. 3240096 +  -4.4  -4.07885   TCAAATCTGTACTGT               TTTAAT TAA ATTAAA               TTTTCAACACCAATA  61 207
        cydA NONE
        cydB 3243162 .. 3243173 +  -4.4  -2.71712   AGAAAATAAGCACTC                CGTT TACT AACG                 ATTTGGGGAGAAAGA  47 16
        cydX 3243302 .. 3243324 + -10.6  -2.56271   GCCCCTTGAGAGAAC           GAAGCGCC ACCATCG GGCGCTTC           ATCTTGTACTGAGAC  74 32
LQF52_RS14710 NONE
LQF52_RS14715 3244357 .. 3244375 +  -8.9   -4.2349   ACAGTGACCACAGCT             TTCCGCT TTGAT AGCGGAA             TTTTCACTATCCAGA  84 253
LQF52_RS14755 NONE
LQF52_RS14760 3254396 .. 3254415 + -13.6  -3.03159   CATCCCTAAACAATA            CGGCCTCA ATAA TGAGGCCG             TATTACAACGCTTAC  87 43
LQF52_RS14770 NONE
LQF52_RS14775 3257934 .. 3257952 + -11.7  -5.45813   TAAACAATCTCTGAA             GCCGCCT CCTAC AGGCGGC             TTTTGTTTTTTCATC 100 353
        treB 3259625 .. 3259648 +  -2.2  -2.78384   AATTATTGTCTCAAC          TCAGGCCGTG CTTG CACGGCCCAC           TGTAATAAAGGAGCG  40 52
        treC 3261381 .. 3261402 + -14.5  -3.61517   GAGGATACCGTGAGA           TGTAGCGGG TAAC CCCGCTACA            TTATTACCAGAAACT 100 40
LQF52_RS14865 NONE
        yfbR 3281741 .. 3281755 +  -2.7  -3.71873   TACTCGGCCAGTGGA               TCGCC CGGTA GGCGC               TTTCCATGTCGATAC  51 495
        ackA 3286769 .. 3286798 + -20.9  -4.65895   AAAACACGTAACTCC       CAACACCGTCAGC CAAG GCTGACGGTGTTG        TTTTTGACTAACGAG 100 39
         pta 3289003 .. 3289022 +  -9.3   -5.5353   TTCTGTTATCTTCTA            TGCCAGC CCCAGC GCTGGCA             TTTTTTATTGCTCTC 100 55
LQF52_RS14905 3290237 .. 3290255 +  -9.6  -3.73224   GAGTCCGGTGTAAAT             TCATCGCA GCG TGCGGTGA             TTTCCTGCGGCGTCA  74 309
        yfcG NONE
        folX NONE
LQF52_RS14930 3293900 .. 3293928 +  -4.5  -3.99494   AGACGTGCACTTTTC        GGGCTACCGAA AAGCTGC TCCGGTGGTCC        TTCTTCTTCAATTAC  60 250
LQF52_RS22215 3298109 .. 3298136 + -12.6  -3.06133   CTCTACATACAACAA        GGGGGAGGACAC TTTC GCGCCCTCCCCC         TTCAATACAGCCTTA  83 71
LQF52_RS15005 3308925 .. 3308941 +  -2.1  -3.33762   GGCGACGCATGACTA              TCGGCCG TCA CGGGAGA              TTGCTATGATTCATT  45 69
         flk 3310328 .. 3310350 + -12.7   -5.5454   AGCGCCAACAAAAAA          CCCCGCTGGC GCAA GCC-GCGGGG           TTTTTATTTATTTCA 100 110
        mnmC 3314303 .. 3314318 +    -9  -4.74801   CAGCACCTGATCCGG              CGGTGA CAGC TCACCG               TTTTTGATGGCGTTA  93 504
        smrB 3319637 .. 3319677 +  -7.1  -2.53392   CGCTCTTCTTCAAAA AAC-G-ATGAGGCGTGTAA GTTCA TTACACGCCTCATACCGTA TGAATTCAGGAGTTT  57 44
LQF52_RS15065 3321879 .. 3321902 + -13.2  -4.64598   TGGTAATTTTTTACA          GGCCGACATG CTCG TATGTCGGCC           TTTTTAGGGTCATTG 100 35
LQF52_RS15070 3322571 .. 3322581 +  -5.4  -3.61398   ACCGATAACGTGACC                 GTCA GCC TGAC                 TTATTAAAAACAAAA  59 8
LQF52_RS15075 NONE
LQF52_RS15080 NONE
LQF52_RS15085 3327204 .. 3327221 +  -6.2  -4.84914   CTACCTCTCTGCCCG             CGTGCC AGAAAC GGCGCG              TTTTATTGTATCGAT  83 392
        fadL 3332607 .. 3332628 + -13.1  -5.52023   TCAGAACGTAGTAAA           GCAGGTAAG GCGA CTTACCTGC            TTTTTTATTGCTCAT 100 50
LQF52_RS15115 3334720 .. 3334732 +  -3.3  -4.32857   GCTTGCCCTGCCATT                CTGGC GTC GCCAC                TTTATCTTTAAACAC  62 234
LQF52_RS15130 NONE
LQF52_RS15135 3339017 .. 3339029 +  -2.6  -3.61268   GAAGTGAAGCGATGG                CGCT ATGCA GGCG                TTTGAGGGTTGCCTG  50 250
LQF52_RS15145 NONE
LQF52_RS15150 NONE
LQF52_RS15155 NONE
LQF52_RS15160 3342303 .. 3342318 +  -3.2  -3.65542   CACACCGATATTGCT              TCAGGC TATT GCCTAA               TATTTTAGCAATGGC  51 45
LQF52_RS15165 3344068 .. 3344082 +  -2.8  -2.62184   CCCACCAGCGACTCA               GCATTG ACA CAATTC               TCCTGTAGAACCGCA  40 75
LQF52_RS15170 3344631 .. 3344648 +  -7.1  -2.54193   AACCTAATAATGAGA             GGTATAA AAAA TTATACC              TCCCTTACCATCATA  57 230
LQF52_RS15190 3348271 .. 3348299 +  -3.6  -3.15861   CGCATCGGCTCCGCA        GGGGCCACCAGC ATCAC GCCGGCGATCCC        TTCCTGACCCTGCTG  45 386
LQF52_RS15225 3355165 .. 3355203 +  -4.7  -5.42862   AACAGCGTCAAGAAT  CGGGGAGAT-TGAG GGGTTATTTTTA CTCGTATCTCCCCG   TTTTTTTCAGCCTGT  84 91
        ypdK 3355591 .. 3355616 + -11.9  -4.06182   GATAAAGATAAAAAA         GGCTGATGGTA TTTA TACCCTCAGCC          TATTTTTATGCCTGC  93 87
        gspB 3372769 .. 3372792 +  -4.5  -3.40775   CGGTTAAATTCCGAA          CACTGCGCC TCTTTT GGCGTACTG           TCTTTCAATAACCCT  51 80
        ycjG 3375894 .. 3375904 +  -3.2   -4.2338   ATTAAGGAGTGTTGT                 GATG CAA CGTC                 TTGTTTATGTTGATG  60 67
LQF52_RS15330 3376755 .. 3376782 +  -3.4  -3.20348   ACAACAGGAAAGATA        GCCGCACTTCACA TCC TGT-AAGCACGGC        TTCGATGTTCATCCG  46 25
LQF52_RS15340 3379778 .. 3379793 +    -9  -5.64274   ATTTCGAAGTAAACA              GACGTC AACT GACGTC               TTTTTTTATGCCTAA 100 40
LQF52_RS15345 3380796 .. 3380841 +  -5.6  -3.07816   ATTTAAAACGGTCAA TAACA-CCTTGTACGCAATGA TATTT TCATTGCGTACAAGGATAAAA TTAAATAACTAACAA  52 146
LQF52_RS15365 3382638 .. 3382663 +  -8.3  -3.30452   GGATTTATCTAAATA         TGGAGGTGAGT ACCC ACCCACCTCTA          TTAATCGTCTTATTA  69 47
LQF52_RS15425 3395363 .. 3395387 +  -5.7  -4.37711   GGTAGAAACAGCAAA          GCCACTCAG CGTGAAA CTGAATGGC          TTTTCCCTTTGCTCA  70 78
LQF52_RS15435 3397304 .. 3397331 + -16.4  -3.02144   GTAACGACAGCCCCT        TTCGTCAGGGCG TTCG CGTCCTGACGAA         TCTTCACCCGAATGC 100 79
LQF52_RS15440 NONE
LQF52_RS15445 3400364 .. 3400378 +  -5.6  -4.41047   AGGAAATGCTCGGCA               GCGCCA GCA TGCCGC               TTTTCATTAACACCT  70 348
LQF52_RS15490 3411075 .. 3411095 + -12.7  -3.73775   GCGGCTGGCCTCCGG            TGAGAGACA GGA TGTCTCTCA            TTTCATCCCGATGAA 100 134
        folD 3412197 .. 3412228 +  -7.2  -2.50994   GACTGCCCTTACTCA      CCCCAGTCACTTAC TTAT GTAAGCTCCTGGGG       ATTCGTGCGGTTGCC  57 79
        ybcJ 3412617 .. 3412640 +  -9.6  -5.33405   TCATGGCGAAAAAAA          GCCCGCAA TTTCATTT TTGCGGGC           TTTTTATTTACTGAA 100 56
        ppiB NONE
        lpxH 3416489 .. 3416501 +  -9.1  -2.68434   CGCAACCGTTTTCCT                CGCCA TAA TGGCG                TGATATGCTCTACGC  66 100
        purE NONE
        purK 3418183 .. 3418214 + -18.2  -2.85999   GACAGATCGGTGACC      GTTATCCGGCAGGT TGCA ATCTGCCGGATAAC       TCTCGTCTGAGGTGA 100 39
LQF52_RS15535 3419995 .. 3420021 +  -8.7  -5.75342   CCTACCCTAATTTAA        CGCCGGCACGTT GTTT AACGA-CCGGCG         TTTTTTTTCAAGGAA 100 44
LQF52_RS15540 3421757 .. 3421772 +  -5.4  -4.34759   CGATATACCAATCTA              CCGTGCT GTT AGC-CGG              TTTCTTGATATTCTC  69 372
LQF52_RS15550 3423268 .. 3423280 +  -4.8   -3.4072   AGCCCACTTCCAGCA                CTGC AATTC GCAG                TTGTGCTCCACCATG  51 319
        ppk1 NONE
         ppx NONE
LQF52_RS15585 3432720 .. 3432743 +    -6   -5.2189   CCTTGCACCATACAA          CCCGCTTA TTCGTTTT TGAGCGGG           TTTTTTACTGATTCC  87 44
LQF52_RS15590 3433340 .. 3433366 +  -2.9   -4.2717   CCGTCATAAAAAAAA        CGGCAG-TGCGA ATCT TCGCAGCCACCG         TTTTCATCAACTAAT  58 222
        mgtE 3436144 .. 3436154 +  -2.4  -2.56596   CCTTGGGCTGGCGAC                 GCTG TTC CTGC                 TGCCTTGATAAAAGG  39 7
LQF52_RS15610 3436598 .. 3436608 +  -8.2  -2.74144   ATTCTCGTTACATCG                 GGGG AAA CCCC                 ATTTAGAGGTAAAAG  60 163
LQF52_RS15615 3437071 .. 3437088 + -11.3  -4.09685   ACAGTAAATTGAAAA             GGTGAGG TATC CCTCACC              TTTTCCAGCCTAAAC  91 34
        galR 3441104 .. 3441131 +  -6.4  -4.07119   ACCACCTGTAACATC        GTTACATCAGTG TAAA TATTGGTGTAAC         TCTTTTGTGTTTTGT  68 337
LQF52_RS15635 3442822 .. 3442842 +   -14  -4.32857   CAGCGGCAGCAAAGC            CAGCGCCC GCTAA GGGCGCTG            TTTATGTTTAGAAGG 100 263
LQF52_RS15645 3445767 .. 3445777 +  -2.4  -3.90316   CGGTTTCGGGATGTG                 AGGG ATA CCCA                 TGTTTTTAAGAAAAT  53 90
LQF52_RS15650 NONE
LQF52_RS15655 NONE
LQF52_RS15660 NONE
LQF52_RS15665 3451369 .. 3451401 + -10.5  -2.89564   GCTACCGGGCGAGCG      CGGTGCAGATGTTCC TAC GGAACCTCATCACCG      TGTGTCGCCTAACAG  72 68
LQF52_RS15670 3452080 .. 3452098 + -12.4  -2.87344   AAGCCGGGGTTCATA             GGGGGCTG GCG TAGCCCCC             TATGTCGGGCGCGTG  82 286
LQF52_RS15680 3454665 .. 3454688 + -11.7  -5.86061   AAATTTTTATCTCTA          TCCGGCGGC CTTTGT GCTGCCGGA           TTTTTTTTCCTACAA 100 58
LQF52_RS15685 NONE
LQF52_RS15690 NONE
        mdtC 3462497 .. 3462527 + -13.2  -3.74872   GTCTCTTTACGGGCC       GCCAGTGACGCGCT CCA GGCGCGGCACTGTC       TTTCGTGGCGTCCAT 100 209
LQF52_RS15700 NONE
        baeS NONE
        baeR NONE
LQF52_RS15715 NONE
LQF52_RS15720 3467452 .. 3467490 +  -9.4  -3.63805   AGATACTGGGGCGAC   CACGGTGTGAGGCATCCC TGC GGGAACCTCCTCACCGTG   TTTCCCCTATAAAAT  77 66
LQF52_RS15725 3468751 .. 3468776 +  -4.8  -4.34285   TAATACGGCCTTATC        TGGCCTGTTCCA TTAA TGG--CAGGCCA         TTCTTTATTTAGGTC  68 38
        yegQ 3470564 .. 3470589 + -13.4  -5.35224   GGAACCACCTCCTTG         GCCAGCTCAA TCTCCC TTGAGCTGGC          TTTTCTTTTTATCAC 100 294
        yegS 3471594 .. 3471616 +  -7.6   -3.8646   GCTGCCGCCCCAGTG           CTCGCTGCTG GAA TAGCGGCGCG           TTTCGATTATTCCTG  70 10
LQF52_RS15755 3475128 .. 3475149 + -14.5  -3.08508   TTTTTAATCGGTAAA           GACGCCTGA GCAA TCAGGCGTC            TGCTTTTGCAGAATC  89 34
LQF52_RS15760 3476343 .. 3476373 +  -2.5  -5.01553   GCGATTGATTAATAT       AAAACGAGATAGC ACAGC GCTATCCCGTCTG       TTTTCTTTATAGCTT  70 172
LQF52_RS15780 3480121 .. 3480154 +  -4.6  -3.01712   TATCGCAGCCTCAAT    CTGTGG-GATCATCGC TTCC GCGTTG-TCGCCACGG     TGTTCCACCAACAGC  47 402
LQF52_RS15790 3482127 .. 3482146 + -13.6  -3.56099   CACGATGATGCTAAA            GCGCCATG TTCG CATGGCGC             TTTCGCGCAATTATA 100 75
LQF52_RS15810 3485186 .. 3485198 +  -2.6  -3.24032   GAAAGACACAGCTTA                CGGT AAACC GCCG                TCTTGATTGGCACCT  45 53
LQF52_RS15815 3486755 .. 3486774 +  -8.6  -3.25942   GATTCTCCATACTGA            TAGTCCAG AGCG CTGGGCTA             TTAGTATCAGCGCAT  67 59
LQF52_RS15820 3487521 .. 3487540 + -11.4  -2.67425   AGTCATTTAAACAAA            GCGCCGTC ATTC GATGGCGC             CTTCTCGCTTATCTC  77 74
LQF52_RS15840 3489481 .. 3489496 +  -7.5  -3.75863   TCAGACGTAAAAAAA              CCCGC AGTCAC GCGGG               TTTAATAGGCCTTTT  68 64
LQF52_RS15850 NONE
LQF52_RS15855 3492147 .. 3492181 +  -2.8    -4.258   CAAGCTTCTTCAAAA    TGT-CAAAAGCCCGC AATTAC GCGGGCTCCTGGGCA     TTTCTTGCTAGATGG  58 88
        xseA 3497149 .. 3497161 +  -7.7  -3.97947   CAAACGGCGTTCAAA                TCGAC GCA GTCGA                TTTGTCCTCGCTCAC  72 225
LQF52_RS15875 NONE
LQF52_RS15880 3498774 .. 3498804 +  -5.4  -3.58343   CATAACGAATTTAAT      CGGCAGG-CGCGT AGCTGA ACACGACTTGCCG       TTTGGAAATCATCCC  59 36
LQF52_RS15945 NONE
LQF52_RS15950 3513872 .. 3513896 + -10.2  -3.36803   ATCGCTGACAATGAA          TCTATCATTG CACAT CAATGATAGA          TTCTGGGTCGAATTC  76 66
        sseA 3514792 .. 3514813 +  -2.1  -2.78508   CGATGATGTCCCTAT           TGCGCGTGA TTAA TCCCGCTCG            GTGTTTTACCGCCTG  40 13
LQF52_RS15960 3515613 .. 3515646 +  -9.6  -2.91681   TTTACTGCTGTTGCA     GGCAACAGCGGA AAAATCGTAA TCCGCCGTTGCC      TCTATCAAATTGACA  70 4
        suhB 3525680 .. 3525717 + -14.3  -4.72696   AACGCTAATTCCGAC   CCACTCTGGCCCAAT AAAACGAA ATTGGGCCAGAGTTG    TTATTTTTCTTTACA 100 33
LQF52_RS16025 NONE
LQF52_RS16030 NONE
LQF52_RS16035 3528846 .. 3528867 + -14.5  -3.17075   TTCTCTATACGACTA           GACGGTGAG TCCC CTCACCGTC            TTACCTTACCAAACG  95 45
        hmpA 3538794 .. 3538809 + -11.8  -5.66989   CGGATCAAACCCAAA              GGCCGC TTTT GCGGCC               TTTTTTTCATCTTTC 100 54
LQF52_RS16080 3540939 .. 3540966 + -14.9  -3.52192   ACGATAAGACCGAAT        CGCGC-GCGGTG TACTT CACCGCCGCGCG        TTATGTACCCTTCCC 100 57
LQF52_RS16085 3542120 .. 3542146 + -13.8  -2.84459   GGAAGTAAGTGTGAA         GAAGCCAGCC CTCATCA GGCTGGCTTC         TATACTCGTCATATT  87 33
        mltF 3552813 .. 3552833 +  -3.2  -4.98758   TAAACCTGCATAAAA            TGCCGC TACTCCTGC GCGGCG            TTTTTCTCGCTTTTT  72 38
LQF52_RS16135 NONE
LQF52_RS16140 3557978 .. 3558012 + -15.8  -2.79273   AACGTCGTTTAACGG     CCCCGGCTTCTCGCTA CGA TATTGAGAAGCTGGGG     GTTGTATTGAAAAGC 100 77
LQF52_RS16155 3570516 .. 3570532 +  -2.2  -3.93288   ATATGCGGGGAATTA              CGTTGC GTAAG GGAACG              TTTAGTTAAATGAAG  53 78
LQF52_RS16160 NONE
LQF52_RS16165 3574147 .. 3574164 +  -8.3  -5.74086   AAAGATAATAAAAAA             GGCGCCC GACA GAGCGCC              TTTTTTATTTCATTT 100 33
LQF52_RS16180 3578082 .. 3578100 +  -4.5  -3.06815   TCAGCCAGCGTCACA             TGGACGT GCCTG ACGCCCA             TCTGTTCAGCCAGCT  47 102
        nadB 3589960 .. 3589971 +  -7.2  -3.21912   TAGTTGATGAGCACA                GCGC AACA GCGC                 TTCATGGGTTAACAA  59 388
        srmB 3591917 .. 3591932 + -10.4  -5.08088   AGAGACATAAAAAAA              GGGAGC TTCG GCTCCC               TTTTTGTTAAGGCTT  93 55
         ung 3593412 .. 3593449 +  -7.1  -2.91873   AGGCTTAAGCGATAA   CGGTTTGGTTGTCTTC AAAAAAC GAAGGCGGCCAA-CCG   TCGTTTACAAATGAT  59 33
LQF52_RS16275 3594936 .. 3594962 + -13.7  -3.70722   TAAATCATAAAATAA         GAAGCCCCAGC ATTTG GCCGGGGCTTC         TTGTGTATTCATGCA 100 46
LQF52_RS16285 NONE
LQF52_RS16290 NONE
LQF52_RS16295 NONE
LQF52_RS16300 3597502 .. 3597524 +    -4  -5.00616   CCCACCGAGCCAACG           CTGATGGTCG CCG CACCCGTCAG           TTTTTTCGCCCAACC  77 407
LQF52_RS16310 3599623 .. 3599637 +  -4.3  -3.12142   GCCTGATCTGGCTAT               TGATG AAAGG CATCA               TCTATTGAGTCTGGC  49 35
LQF52_RS16315 3600446 .. 3600457 +  -7.2  -2.72477   TCCATCATTAGACCG                CCGC AATT GCGG                 TGCTATGCTTATCTG  58 192
LQF52_RS16320 3601100 .. 3601116 + -13.7   -5.1675   GACAAAAGCAAAAAA              CCCGCGA ATT TCGCGGG              TTTTTTCATGCCTGA 100 66
        mtnN NONE
        btuF 3611721 .. 3611736 +    -9  -2.71924   AAATGAGAAAACTTT              GAACCG ATAT CGGTTC               CTTTGACACCAGGTA  66 217
LQF52_RS16370 3612126 .. 3612149 +   -11  -5.86609   TCTGCTATAAAAAAA          CCGTGTCTCG GCAA CAAGACACGG           TTTTTGTTTTTTTAG 100 112
        hemL 3614096 .. 3614130 + -13.8   -3.9163   GTAAAAGCGAATTAA    TAGGCGACAGCGTCA CTCACC TGACGCTGTCG-CTA     TTTCCTCTGTCATTT 100 37
LQF52_RS16385 NONE
LQF52_RS16395 3617099 .. 3617137 +   -11  -3.51137   ATCTCCGGCTAATCA  CAC-GGCGTCGGCGG ACTTCCCTCC CCGCCGACGCCCGCG   TTATCTCACCTGCTT  81 29
        thpR NONE
        sfsA 3628186 .. 3628211 +  -4.1  -2.83249   ACAACGCCGCAACTT         CACTGCATAAAA GGG TATTATGC-GTG         TCGTGTTATGTAGGA  45 244
        dksA 3628751 .. 3628769 +    -9  -2.50385   CAGGAACGCTACCGC             TGATGAAT GAT ATTCATCA             CTCTATCTTCTGTCT  65 86
      gluQRS 3629835 .. 3629845 +    -4  -5.21709   TCGACGTCAAAAACG                 TTTC CCG GAAA                 TTTTTTGCTGTGCCG  79 109
        pcnB NONE
        folK 3631871 .. 3631899 +  -5.3   -3.1875   CATCTGCAACTTGAA       GCGCGACGGGTA TATCGC TACACGTCG-GC        TTACATTAGAATGTC  52 51
        panB 3632781 .. 3632793 +  -2.6  -3.08056   TTAAAAAACGAGCAT                TCCG TTAAT CGGG                CTATTTTTTAGGAGT  43 55
        panC 3633652 .. 3633662 +  -3.2  -2.87211   ATTGATAACCACCAG                 GTCG ATT TGAC                 TGTATGAACCGAGGT  44 8
        panD 3634087 .. 3634104 + -12.7  -3.75505   TTTAGATAAGCAAAA             GGCGGTG TTAC CACCGCC              TTCTCATTTTTGCAG 100 45
         can 3637105 .. 3637126 +  -5.8   -3.1332   CCACCAGCACCATAT           CGCTGCCG CTATCA CGGTAGTG            TTCGCTGATCTGTTG  52 516
LQF52_RS16490 3638095 .. 3638105 +  -8.2  -3.58522   TGTCGCCTGATGATC                 GCCC AAT GGGC                 TTTGCCACTGATGGT  65 329
LQF52_RS16505 3641134 .. 3641146 +  -3.4  -3.66784   GCTCGGTTTGCTCTC                CTAC GCACA GTAG                TTCTCTTCCACCTCC  51 13
        speE 3642109 .. 3642122 +  -2.3  -2.53876   GAGCGCGTTACAGAA               TGCGC AATA GCCCA                TCACTTAGGGTAACC  39 16
        speD 3643216 .. 3643226 +  -5.4  -4.83246   TTTCGTCAAAAATGA                 TGTG TGT CACA                 TTTATTTATTTCTAC  76 283
        nrdH NONE
        nrdI NONE
        nrdE NONE
        nrdF 3647354 .. 3647377 +   -14  -3.20573   CCAGAAATGAAAAAA          CCCTGAATCA TTGT TGATTCAGGG           TCTTCATATAAGTGG  93 101
        rnhA 3649201 .. 3649211 +  -3.2  -3.53012   TGTTTTTTATTGAGT                 CTGG GGA TCAG                 TTTGCCCAGGCCAAC  49 331
        gloB NONE
        mltD 3651898 .. 3651920 +  -8.5  -5.61596   CAATAATGAAAAATA          GCCCTCCTAC AGAT GTAG-AGGGC           TTTTTTTATAGCGAT 100 55
        bamD 3664058 .. 3664075 +  -9.1  -5.71983   CACGCAGTAATAAGA             CGGCAGC TTCG GTTGCCG              TTTTTTTATGGTTCG 100 52
        raiA 3664717 .. 3664732 + -11.8  -4.74103   TTTACCTCAATATAA              CGCGCC TGAG GGCGCG               TTTTTGCATTCCAAG 100 50
        pheA 3666227 .. 3666251 + -12.2  -3.61398   CGAAGAATTGAAAAA          GCCATCCTGG TATCC CTAGGATGGC          TTCTTAAACACAACC  89 51
        btsR 3669440 .. 3669458 +  -6.7  -3.61715   TGAAAGAAAAATTGG             GTATCGC CTGAT GCGATGC             TTCTTCAGGCCGATG  64 15
LQF52_RS16645 NONE
LQF52_RS16650 3671198 .. 3671216 + -14.6   -4.7373   ACCAGGGAAAGCGAA             GCCCACCA ACA TGGTGGGC             TTTTTACTGACATCA 100 178
LQF52_RS16680 3675833 .. 3675853 +  -9.7  -5.36441   ACGAGCACAAAAAAA            GAGAGCCAA CGT TCGGCTCTC            TTTTTTATCTGCGCC 100 48
LQF52_RS16755 3687366 .. 3687381 +  -3.2  -4.26903   AGACACCATAGCAAC              AGGTCA TCAT TGACCG               TTTTCCTGAACTGAC  60 49
LQF52_RS16760 3688165 .. 3688204 +  -2.8  -2.80464   GTCTATAACTTTGAA  TGGCGGGTTTATTCATTGG TCG CAAGCGAATAC-CCCGCCG  GTTTGCCATTGATGA  41 91
LQF52_RS16765 3690074 .. 3690086 +  -6.3  -2.51966   AAGGTTAATCTACCG                GTTGT AAA ACAAC                ATTGGTGAAATTTCC  53 221
        grxB 3693341 .. 3693361 + -11.1  -4.40561   TATAGAAACAACAAA            GGAGCGGCT TAT AGCAGCTCC            TTATTTTTAGCAACG  90 174
LQF52_RS16820 3700621 .. 3700651 +  -4.7  -5.20606   GACCATAAAATAAAA      AACCGGAAG-GATC ATGT GATCACTTCCGGCC       TTTTTATTAATCTTT  80 51
LQF52_RS16975 3742346 .. 3742356 +    -4   -4.2717   GAGGATCTCTAAAAG                 TGAA TGG TTCA                 TTTTAGTGGGATGCT  62 171
LQF52_RS16980 3744101 .. 3744112 +    -3   -2.7464   ATTTCCAAAAAGTAA                TGTA ATTT TACA                 CTTTGAACATCACTT  41 229
LQF52_RS17005 3750154 .. 3750194 + -11.4  -3.36452   CCTCCGGTAGCAAGA CAGGCTATGTATT-TGTGA AATA TCACACAAAGCATAGCCTG  TTGCTATTGGAGGAT  83 92
LQF52_RS17025 3753792 .. 3753826 + -11.5  -2.53382   ATCTGGCAGGAACAG    CGGTCCGTGTA-GCGA AGAT TCGCCTGCACAGACCG     TGCGTTACACCTGCT  77 53
        pepD 3757606 .. 3757625 +  -8.5  -5.27335   AGTCGTAAAAATCAG            GGCGGCG CATAGA CGTCGCC             TTTTTATTTCCAACC  95 47
        dpaA 3761597 .. 3761618 + -10.2  -3.91798   AATAGAACGAATTCA           CCTGGCAT AATCTG ATGCCAGG            TTTCGTTGCCCGTTA  80 36
        fadE 3765761 .. 3765783 + -19.2  -4.15396   CAGCATAAACAGAAA           CAGGCCGCCA ATA TGGCGGCCTG           TTCTTTCCTTTAAAG 100 33
        yajD 3766211 .. 3766241 + -13.3  -3.33492   GAAATAATCGGTTTG       CCGCTCCCATCAG GTTCA TTGACGGGAGCGG       TTATCGCATACGTGA  95 34
        mtnA 3768766 .. 3768782 +    -5  -3.59979   CAGCTCACCGCATCA              CCCGAG CGTGC CGCGGG              TTTACCGTCAACGAG  55 143
LQF52_RS17140 NONE
LQF52_RS17145 3779139 .. 3779174 +  -4.9  -4.16943   TACCGAGCTTTTCTC   GT--CCCGACCTCAT CATAAAAA ATGAGGTCGGGCAAC    TTTTCAGCTATACCG  65 42
LQF52_RS17190 NONE
        hpxX NONE
LQF52_RS17200 NONE
        hpxZ 3791980 .. 3792002 +  -7.1  -3.75629   TAACAATGGAGGAAA          CAAGCGCCAT CACT AT-GCGCTTG           TTTCAGTTCCCACTA  68 41
        proV NONE
        proW 3795824 .. 3795862 + -14.7   -3.2348   TCAAGCAATAACGCT  CGTC-CCGCTTGTCTGGC ACAC GTCAGACAAGCGGCGACA   TTCACTATTCGTTTT  95 30
        proX 3796948 .. 3796971 + -16.8  -4.90266   TCACCGGTAGACGAA          CGCCCCTTTC GCAG GAAAGGGGCG           TTTTTCATTGATGGG 100 41
LQF52_RS17235 3799652 .. 3799678 + -13.1  -3.43217   TAATAACGTGAAATT         CCGGTAACGCT TTGCT AGTGTTACCGG         TTAATTCCCTTTAAG 100 148
LQF52_RS17240 NONE
        ygaH 3800846 .. 3800865 +  -2.1  -4.03234   CGAATAATCTTCATT            TTAAGCG ATTCTC CGCTTAC             TTTCTGTCACAGAAA  55 92
        mprA 3801594 .. 3801605 +  -7.2  -2.94912   ATAGGCATGACTTCT                CCGC AACC GCGG                 TATGTGGCTTAGCAA  59 135
        emrA 3802916 .. 3802929 +  -3.7  -3.14132   ATCAGCGCCATTATT               CAGGC GAAC GCCGG                TTAATCGGGCAGGAG  48 8
        emrB 3804501 .. 3804539 + -13.8  -3.69618   ACTCGCCGTAAGCTT   TCTTTCCCCTTCTGCCAG CAA CTGGCCGGAGGGGAATGC   TCTTTTACCCTTCCC 100 40
LQF52_RS17265 3805951 .. 3805977 +  -7.3  -3.99275   CATCCCTGTACGCTC        GGGTT-GCGCCA TCCA TGGCGCAAACGC         TTTACTCTTCTATCC  70 100
        trxC 3808401 .. 3808433 +  -7.1  -4.25104   CGCTGTAGAGAATTA     GGGTAGGAGTGTAG GTATTA TTGC-CTCCTACCC      TTTTGGTCAACCCGC  74 33
LQF52_RS17285 NONE
LQF52_RS17290 NONE
        pssA 3813543 .. 3813571 + -15.5  -3.68359   ACTCACGCTATACTT        TGAAAAACCTCGG AAG CCGAGGTTTTTTA        TTATCATTTTGGAAC 100 42
        metN NONE
LQF52_RS17350 NONE
LQF52_RS17355 3824363 .. 3824386 + -13.2  -4.08948   ATTAAAAGATATTGT          TAAGACGGGC TACG GCCCGTCTTG           TTATTTGTGCAATTG 100 60
        rcsF NONE
        tsaA 3825664 .. 3825680 +  -7.9  -2.88231   CTTTTTATGTGCCTT              CGGCTGC GCG GCAGCCC              TATGCTACTTGTCGT  61 119
        proS 3827487 .. 3827504 + -11.3  -5.63517   ACAGGCATAAAAAAA             TGGTGGG TTTC CCCACCA              TTTTTTATTTCAAGA 100 78
LQF52_RS17410 3834665 .. 3834685 + -12.6  -4.07246   GAGACGTCGCATCAA            CCGGACAG CCAGC CTGTCCGG            TTTAATTTAGAATAA 100 88
LQF52_RS17415 NONE
LQF52_RS17420 3836241 .. 3836269 + -14.6  -5.45802   AAACGGTAAACCGCA        GGCTGTCAGCGT CTTCC GCGCTGGCAGCC        TTTTTCTTTTACCAC 100 57
LQF52_RS17450 3843042 .. 3843053 +  -2.2  -3.49419   CACAGGGTATAACGA                TCTG ACGT CAGG                 CTTTTTCTGGGAGGA  47 112
        eutR NONE
        adhP 3845603 .. 3845629 +   -16  -4.67904   TTAAGCCCCAGAATG         TAAAAACCGGGC AGT GCCCGGTTTTTG         TTTTTACCCTTCGTG 100 324
LQF52_RS17490 3853372 .. 3853392 +  -3.2  -4.14056   CGAACAGGCTCACAT            TTCTGGCG TTCGC CGCAGGAA            TTTATCCTTTGCGAT  57 158
LQF52_RS17495 3855536 .. 3855546 +  -3.2  -4.00443   CAGTGCTGCTTCTTT                 CGGA TGT TTCG                 TGTTTTTACTGATGG  56 428
LQF52_RS17505 3858416 .. 3858442 +    -6  -3.21276   ATAAGCACTTTCGGG         TAGTATGCGA CGGTTTT TTGCATACTA         TGTTCTGAAAGCCCC  57 37
        queD 3858874 .. 3858900 + -12.3  -2.85351   GGTGGTGCTGTAGTC         TGGCGTGAGCG CCCCT CTCTCACGCCA         TCTGATGTCAGGCGA  82 50
LQF52_RS17520 3860789 .. 3860806 + -10.5  -2.62184   GCCGTCACTCAAGCA             GGGGGCG GTTC CGTCCCC              TGCTCTGCCACCACC  70 48
LQF52_RS17530 NONE
LQF52_RS17535 3863611 .. 3863622 +  -3.6  -3.30124   TGCTGCCAATTATTA                CGGT TTTT GCCG                 TTATCCAGCGTAAAA  48 79
LQF52_RS17555 NONE
LQF52_RS17560 3870355 .. 3870379 +  -4.9  -4.56597   TTTGCCATATCAATG          TGCTGCATCTG CTG CGGGTACAGCG          TTTTTGCCAGCCAAA  71 218
        barA 3885018 .. 3885055 +  -7.1   -3.7795   ATCCCCAGCATAGCC   CTGTCTCTTC-GTCATAT TTT ATGTGGCTGTGGAGACAG   TTTCGTGCGCTTTGC  68 46
        garD 3895568 .. 3895610 + -16.4  -4.04806   CAGTAACCTGATTAC CGTTCTCCGCAGGCCAGA ATCATTA TCTGGTCTGCGGATAGCG TTATTTGATCTACAA 100 30
LQF52_RS17640 3897785 .. 3897816 +  -7.9  -2.55829   GTCATCTCATCCATT      GTGGCAAGGGAGT AGAAAA GCGCCCTTGCCCC       CCTTTCTTTCCCTCC  59 46
LQF52_RS17645 3898375 .. 3898425 +  -2.7  -3.59733   CCCTTCTTTCTTTCT CTCTCTTTCCTGATTGATATATTT TGTT ACATG-AGCTATCAGGAAAGTGAG TATTTCATGTTTCAT  50 60
LQF52_RS17650 3899063 .. 3899083 + -15.5  -5.14563   CCAGTAAACGTGAAA            GGTCGCTTC AAT GAAGCGACC            TTTTTTCATCAAGGG 100 62
LQF52_RS17680 3908234 .. 3908252 + -10.3  -5.27335   GCTAGTCGGAACACG             TGCCTGC TTCTT GCAGGCA             TTTTTCTTTGCGGCC 100 36
LQF52_RS17685 3909583 .. 3909606 + -18.2  -3.59202   ACGTCCTGAAACAAA          GAGGCCACGC TAAT GCGTGGCCTC           TTCTCTATAAAAGTC 100 32
        plsY 3911740 .. 3911757 +  -9.9    -5.626   AGTAAGGCAAAAAAA             TTCCCGT TTTC ACGGGAA              TTTTTTTATGAAGTA 100 36
         ppa 3914200 .. 3914216 +  -9.4  -5.38054   TCGCATGATCAAAAA              CACCGC CTTGC GCGGTG              TTTTTATTTATGGCG 100 83
        msrA 3921636 .. 3921655 +  -9.2  -3.36968   TATAATGCCCCCGAA            CCGGGCTA ATCC TCGCCCGG             TTATGACCTTCAATA  71 69
LQF52_RS17735 3923255 .. 3923271 + -15.1  -4.57482   TAGCAGAAACCAGAA              CGGCCCG CTA CGGGCCG              TTTCTTTATCACTCA 100 191
LQF52_RS17745 3924636 .. 3924650 +  -2.8  -3.36289   CCCAACCGCCACCGT               CTGG TGCTCAC CCAG               TTGATTGAGATAGTC  47 256
LQF52_RS17755 3927334 .. 3927381 +  -8.5  -2.59742   AATAAAGACTGACAG CGATGTCATTCTCAGGCTCCTGC TTCG GCAGGAGCCTGAGCC--ACAGCG GTTATAGCGGTTCAA  63 36
LQF52_RS17765 3928799 .. 3928817 + -13.1  -5.65927   TCCCCCAACGAACAA             GCGCCGC TTTTC GCGGCGC             TTTTTTATTTAGCTA 100 47
        ipdC 3931405 .. 3931427 + -10.6  -3.04322   CCTCGGTATTCTTTT           TACCGCCTAC CTC GTAAGCGGTA           TATTCAACGATTAAA  76 207
        ytfE 3932210 .. 3932234 + -18.7   -4.9725   ATTCCGTAAAAATAA          CAAAGGCGCTC AGT GAGCGCCTTTG          TTTTTGTCTGGAGAT 100 77
LQF52_RS22220 3933191 .. 3933208 +  -4.2  -3.04102   TAGCGTTGTTAATGA             CATCAT TTTTAT ATGATG              CTGTTTTTATACTGA  47 210
LQF52_RS17790 3934333 .. 3934349 +  -7.9   -5.1287   GAATCAAGTCAGACA              TGCGGCC TCC GGCCTCA              TTTTTTAGGTATAGG  91 384
LQF52_RS17825 3939176 .. 3939190 +   -10  -3.56568   CGGGTGACTGACAAA               TCTGCC AGA GGCAGA               TTTGAACGCTACTTG  77 124
LQF52_RS17830 NONE
        prfH 3941263 .. 3941291 + -11.7  -4.52857   CGCGCTAACCTCAAC        TCACGGGCGGC CCCCACT GCCGCCCGTTA        TTTTCTCTCGGAAAT 100 33
        bsmA 3942179 .. 3942204 + -13.4  -2.62184   GGACACGCAGTAAAA         CAATACCGGG CAGATC CCCGGTATTG          TCATGTCACGACAAA  84 48
LQF52_RS17855 3944529 .. 3944552 + -19.6  -2.64616   ATAATCCCAACGACA          GCGGGGTGCC TCAT GGCACCCCGC           TGCTATCAATCACCG 100 37
LQF52_RS17875 3950546 .. 3950558 +  -3.5  -4.26953   AGGTTATTAATTACC                TATTA ATA TAATA                TTTATTAAATTAATT  60 372
LQF52_RS17880 3952616 .. 3952656 + -11.2  -4.27316   GAACGTTTGCATTCC CGCAGCGGC-TCCCG-TCTG AAT CAGGCCGGGAAGCTGGTGCG TTTTCCCTTCCCGAA  91 75
LQF52_RS17890 NONE
        proC 3955211 .. 3955223 +  -4.7  -4.25053   GCTTTTTTAACCAAA                GCGGG TTC CCCGA                TTCTTTATCTTATAA  64 31
LQF52_RS17900 3955787 .. 3955800 +  -2.3  -2.64735   CATGGACCTGTTCCC               GGGGC TGTG GTTCC                TGCTGTGAGTGCCAT  39 4
        yggU 3956071 .. 3956087 +  -2.9  -3.05463   GCAACACATCCCGGC              TGACGTC GCG GGCTTCA              TTGAATAAACACGAT  43 1
LQF52_RS17910 3956701 .. 3956713 +  -3.3  -2.75481   TGCGCCTGTTGCTGG                ATGCG CTA CGCAA                TGCTTAAGCTTCCCC  43 6
        hemW 3957864 .. 3957891 +  -8.4  -2.60194   AGAGTAATCATTCCG        TGGCAGGTTTTC TCTG GTAAACCTGCCC         ATTGCTTCCCACCCT  63 34
LQF52_RS17920 NONE
LQF52_RS17925 3959477 .. 3959496 +  -9.2  -3.91897   TCCAATAATAAAAAA            CGGGAACC CTAA GGCTCCCG             TTTATCACTAGCCCA  79 81
LQF52_RS17930 3959989 .. 3960007 +  -5.9  -5.63517   TCAAATAACAAAAAA             CCGGCCA TACGT TAGCCGG             TTTTTTGTTTAAGCC 100 48
LQF52_RS17975 3969904 .. 3969916 +  -4.1  -2.93348   CCAACAATATGCCTG                TGGTA ACA TGCCA                TATGATGTTCGTAAC  46 79
LQF52_RS17980 3971455 .. 3971478 +  -4.4  -3.57144   GCGCCCAGAGTGTTT          CCAGGCTCGG GTTA CCGACTCCGG           TTTCCAACTGCGAAA  52 483
LQF52_RS17990 3972743 .. 3972766 +  -4.5  -4.07687   TCCAGCGTCTGACGA          CGTCGAATC AGGCGC GGTTCGCCG           TTTTCAAACAGCACT  62 75
LQF52_RS18000 3975013 .. 3975023 +  -3.2  -4.08945   GGGCGTGCCTTCACG                 TCTG GAG CAGG                 TTTTGCAGCAGTAAT  57 1
LQF52_RS18010 NONE
LQF52_RS18015 3977635 .. 3977657 + -13.4  -5.26875   ATCAACCTTCATAAG           GGAGCACGCC AAC GGCCTGCTCC           TTTTTTCGTTCCCGA 100 49
LQF52_RS18020 NONE
LQF52_RS18025 3978698 .. 3978719 +  -7.2  -3.53091   TTCTTGATCAAAAAA           GCCCCGAC GAAATG GTCGAGGC            TTTGCGAAAACCCAT  65 55
LQF52_RS18035 3980335 .. 3980345 +  -2.4  -2.78384   TATCAGCCACGACCC                 GCTC CCT GTGC                 TATAGTCGGCACCAG  40 121
        dusA 3981442 .. 3981456 +  -5.8  -4.73388   ATCTGGTTTAAAAAA               TACTAA CAG TTAGTA               TTTTTCATCAACATT  74 30
        pspG 3982224 .. 3982262 + -21.3  -2.52543   GGCCAAGGCTTTTCT   GGCAATCATACCGACTC TTAAC GAGTCGGTATGATTGTC   TGGCTTAACCGCCGT 100 374
        dnaB NONE
         alr NONE
LQF52_RS18070 3988623 .. 3988676 +  -5.7  -4.70319   CACTGATGGCATGAC CCGCGATGGCCGTATCATTCGGGCC TATA GGCGTGCCTGCTGCGGCTAGCGCGA TTTTAATTTTCGTCG  78 189
LQF52_RS18085 3990474 .. 3990488 +  -4.2  -4.34008   ATAAATAATAAAAAA               TGCATG AAT CACGCA               TTATTTTCATTCATA  64 121
LQF52_RS18090 3991225 .. 3991239 +  -9.2  -2.82742   ATGAACCATCGCCCC               GGCCGT TAC GCGGCC               TGATTGTCCCCCACT  66 8
LQF52_RS18095 3992516 .. 3992564 +    -9  -3.99228   ATTGTAAATGACAAC GCCACTGGCTTAACCGA-CTCAC CGTT GTGAACTCGCTTAACTCAGTGGC TTGTGTTTTCGGTTA  79 41
LQF52_RS18100 3993380 .. 3993394 +    -7  -3.90744   GTCGATCACCGAAGG               CACCGC TAA GCGGCG               TTATTTCCCGCGAGA  68 239
        ssb1 4000779 .. 4000794 + -10.4   -5.0925   AAATCATCTATAAAA              CCCCGA AATT TCGGGG               TTTTTGCTTTTGGGA  93 66
LQF52_RS18150 4002682 .. 4002717 +  -8.1  -3.80573   CACCGCTATGCCCGC    CTGCGCGAGCGCATC CCGATA GCCGCGTTCGCGCTG     TTTGATCGTCATACG  71 500
LQF52_RS18185 NONE
LQF52_RS18190 NONE
LQF52_RS18195 NONE
LQF52_RS18200 4015332 .. 4015362 + -17.6  -3.54543   ACCGCTTTTCGAGCC       GCCAGTGACGCGTT CCC GACGCGGCACTGGC       TTTCGCGGCATCCAT 100 235
LQF52_RS18205 4016421 .. 4016435 +  -2.1  -2.63357   GCCAACGCTCAGGAT               CGTCA CGTCA TGATG               CTATTTCACCTGATT  39 13
LQF52_RS18210 4017274 .. 4017292 +  -5.2  -2.99449   GTGGGCTGTTACGCC             TGCGTCGG TGA CCGATGAA             TCTCGTTATCTGCAA  51 15
LQF52_RS18215 4018210 .. 4018239 + -16.6  -2.73771   ATGAAGTAAACCTCA       TTCCTGCCAGTG TTACAT CACTGGCAGGAA        TCCTCTCTCTGCTCA 100 32
LQF52_RS18220 4019029 .. 4019042 +  -8.1  -3.86897   GCTTTCTCTTCCGTC               GGCGT GGTA ACGCC                TTTGTCCAGACTCCA  71 274
LQF52_RS18240 NONE
LQF52_RS18245 NONE
LQF52_RS18250 NONE
LQF52_RS18255 4027088 .. 4027105 + -14.1  -2.91144   TTTTTCTCTTTATCA             GCGGGGG CCCT CCCCCGC              TAGTTTCAGGACTCG  89 53
LQF52_RS18260 NONE
LQF52_RS18265 4028348 .. 4028373 +  -8.9  -3.28791   TTAATACACGGGATA         GCGGCAACAGC GCAG GCGCTTGCCGC          TTCTCCCCCAAGCCT  71 47
LQF52_RS18270 4030155 .. 4030168 +  -8.1   -4.4017   TACAGATAATCGCAT               CCAGC TCCG GCTGG                TTTTGTAGCAATTCC  83 357
LQF52_RS18280 NONE
LQF52_RS18285 NONE
LQF52_RS18290 4033409 .. 4033423 +  -2.8  -3.40299   TGCTGGGCATTATCG               TGCG CTAAGCC CGCA               TTGTGCATGTCATCC  46 18
         fsa 4034149 .. 4034167 +  -8.1  -3.02511   GATTGATGGAAAACA             CCACTCG CTTGC CGGGTGG             TGTTACCAAAATAAC  62 39
LQF52_RS18310 4038375 .. 4038405 + -11.1  -3.28472   GCAACGAAAAACACA       CGACCCAATCGAC AACTC GCCGATTGGGCCG       TCATTTTTAGTACAA  80 87
LQF52_RS18320 4040585 .. 4040605 +  -4.7  -3.40052   TATAGGTTGCCGCAC           CCG-CACC CGCGAT GGTGACGG            TATTATTGACCGTGT  51 183
LQF52_RS18330 4044247 .. 4044279 +   -13   -3.2218   ATTCTGAATCACTAA      TAACCAAATGGAAT TTATT ATTCCGTTTGGTTA      TTAATCGCTATTCAG  91 40
LQF52_RS18335 4045784 .. 4045799 +  -4.7  -4.72272   CTCAATCTGCCTGAT              GGGAA AGCCAC TTCCC               TTTTTCATCAAAGAC  71 138
LQF52_RS18390 4061851 .. 4061868 +  -3.3  -3.63953   GTACTTACCACTATT             CTCTGCC AAAC GGTAGCG              GTTTTCTTATTTTAA  51 207
LQF52_RS18395 4063380 .. 4063398 + -14.6  -4.49756   GATCCTCCTTTTCCA             TGGCCGAC TCT GTCGGCCA             TTTTCATATTTGCAA 100 59
LQF52_RS18400 NONE
LQF52_RS18405 4066006 .. 4066022 +  -2.2  -3.75535   AACGTCACTTTTTTT             GCTAGCG TCAC CGC-GGC              TTTCGGTGTCTCTAC  50 129
LQF52_RS18420 4068655 .. 4068687 + -17.8  -3.15544   TCTAAAATCACATCC      CTTTCCGGCGATCG CAGAT CGCTCGCCGGAAAG      TTAATAACAGTAACA 100 36
        nadC 4069701 .. 4069722 + -11.6  -4.07868   CTCTATTTCTCCCGG           CGAGGTGC TATTTC GCACCTCG            TTTCTCTGCCTCTCA  91 47
        ppdD NONE
        gspE NONE
        hofC 4073452 .. 4073472 +  -2.5  -4.41844   TCGCGGATGCAGAAC            TCATGCCGT AGA ACAGCATCA            TTTTCTCACCGTTTT  62 340
        coaE NONE
        zapD NONE
        yacG 4076670 .. 4076686 + -13.7  -2.73474   TCTTATCAAGTAAAA              GGCGGTC AAT GACCGCC              CTTGTACTTATCACA  86 518
LQF52_RS18480 4081089 .. 4081109 + -10.5  -3.88137   TAGTGAAATCCAAGC            TGAAGCCGT TAA ACGGTTTCA            TTTCTGCCCACTTGT  80 502
LQF52_RS18565 NONE
        leuA NONE
        leuB NONE
        leuC NONE
        leuD 4110672 .. 4110693 + -11.5  -5.61881   TACGGATATCCCAAA           GCCCGCATG ATTT CCTGCGGGC            TTTTTCTTTTTGAAG 100 50
LQF52_RS18630 NONE
LQF52_RS18635 4116155 .. 4116170 +  -7.6  -3.17486   AAAAAACTCGCTGGC              TGGTGA AACG TCACCA               TTACTCAGAATTCTT  62 127
        sgrR 4118328 .. 4118342 +  -4.2  -2.57067   ACCGTTCAGCCACCG               CGCTGA AAA TCAGCC               TGCCTTGCCTGTTAC  44 241
        thiB NONE
        thiP NONE
        thiQ 4122007 .. 4122032 +  -6.7   -4.2803   GGAATCATCGTCAGC         GGCGCGCTGTC CTTC GGCGACGTGCC          TTTTGCCTTCAGGTG  74 442
        ilvB 4125510 .. 4125526 +  -2.9  -2.52491   ACCGGGCGCCGCGAA              CATCGAT ATG ATCGGAG              ATTAATGACTATGTC  40 4
        ilvN 4126053 .. 4126070 +  -3.4  -3.53811   TGTTTACGTTTATCA             CT-GCGC CACCA GCGCCAG             TTTAGCCAGCCTGCG  49 230
LQF52_RS18685 4128690 .. 4128711 + -13.1  -2.91383   CTCTTCTCTATCATA           GGTGATGTC GCTG GACATCACC            TGTATAAATAACCAT  86 52
LQF52_RS18690 4131304 .. 4131320 +  -9.5  -2.79133   TTTGCATCAGCAGCA              TTATCGG CAC CCGATAA              TGTAATCAGACATTC  69 187
        rapA 4134249 .. 4134269 +  -6.2  -2.62263   TTGGATGCGATCCGT           CTGGTTGTG GTGA CACA-CCAG            TAATGTGCCGCCCGT  53 2
        rluA 4135658 .. 4135669 +  -5.8  -3.69354   ATGGCCGTTACTACG                TCGC TGAT GCGA                 TTTACCGTTCTGGCG  60 406
        lptD NONE
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH 4143797 .. 4143809 +  -4.7  -2.72144   CACCTGCTATTCGCC                CCAGC GTC GCAGG                CTTTACCGCCAGTCC  45 516
LQF52_RS18750 4145249 .. 4145264 +  -7.5  -3.20348   CCAGAAACGAAAAAA              CCCGC AACAAA GCGGG               TTAGCTATTCATCGA  62 49
LQF52_RS18770 4148456 .. 4148470 +  -8.6  -3.08133   TCAGGTGAGTAATAA               GCAGAA GGC TTCTGC               TTGCCTGAATGCATC  66 525
        rpsT 4161790 .. 4161803 +  -9.5  -5.76633   GTTGCTAAGAAAAAA               CCGGC CTAG GCCGG                TTTTTTTGTGTCTGC 100 58
        satP 4168475 .. 4168509 + -21.6  -4.77036   ATCCTGCTTTACATG     CTAACGAGCCCTGTCA GAT TGACAGGGCTCGTTTG     TTTTTGATGATGCGA 100 65
LQF52_RS18865 4172094 .. 4172112 + -14.6  -4.25104   TCGCAGACAAAAAAA             TAGCCGGG CAT CCCGGCTA             TTTTCATCAACAAAA 100 65
        yaaA 4174320 .. 4174349 +  -3.5  -4.87665   CCCTTTCAGGGCCGT       CGCTAGCGACGTT CAAA AACGTTCCTGACG        TTTTTGTCCATGGCG  69 174
        arcA 4181702 .. 4181729 + -21.4  -4.36127   AAAATTAATTCCCCT        CAGCCGGAGCAG GCAT CTGCTCCGGCTG         TTTTCCCTTCTTACC 100 33
        robA 4183390 .. 4183402 +  -4.7   -4.2704   ACCACCCATCCCGGT                GCCAG CCA CGGGC                TTTGTTGATAATCAA  66 90
        yjjX 4184597 .. 4184612 +    -4  -3.33744   ATCTGCCGACAGCAA              CTGCGCT TCC AGC-CAG              CTTTTTAACGCGGGG  49 68
        ettA 4189160 .. 4189178 +   -16  -5.28942   AACGTGATAAACAAA             TGGCCCGC ATT GCGGGCCA             TTTTTCTTTCCAATA 100 51
LQF52_RS18950 4193206 .. 4193231 + -16.2  -4.23045   CGCGCTGTAATAACG         CAGCCAGCCC AATTTG GGGCTGGCTG          TTTATTCACTGATTA 100 31
LQF52_RS18965 4196603 .. 4196624 + -12.3  -3.29471   AAGTATAAAGAAGAA           CAGGCCTGT CTGA GCAGGCCTG            TTGGTATCATCAAGG  90 51
LQF52_RS19005 4206824 .. 4206851 +  -7.2  -2.53822   ATAAAAATTTTTCCA        GTTTGATCATAT AGTT ATATGATAAAAC         CTGTTGTCGCGTCCG  57 449
LQF52_RS19010 4207640 .. 4207657 +    -7   -5.1675   GATAGCCGAAAAAAG             GGATGC TCACTC GCATCC              TTTTTTACTCGCTCA  84 43
        metK 4211548 .. 4211567 + -12.2  -4.93968   TCAATAAACACCAAA            CGGCGAAT GAAA ATTCGCCG             TTTTTCATTCTGGCT 100 50
LQF52_RS19030 4212169 .. 4212185 +  -3.7  -4.36595   TTTAAAAGGGAATTT              CCAGTTT TAA AAACTGC              TTTTGCATTTGCCTG  64 36
        endA 4212985 .. 4213018 + -13.9  -3.56262   AGCGAATCTGTTTCC     AGCAAAACCACCGCC AGAT GACGGTGGTTTTGCC      TATTTCTGGCGTTTC 100 57
        rsmE NONE
        gshB 4214802 .. 4214822 + -11.1  -3.86346   ACCAGACACACCACT            CGGCCCG CGCAATA CGGGCCG            TTTCTCCAACGCTGA  86 51
LQF52_RS19050 NONE
        ruvX 4215849 .. 4215882 +  -6.6  -3.13867   CAGCTTTAAAAGACA     ATCCCGTGTAGCCG AGGATC CGACAACACGGGAC      TATATTGATGACTAA  59 32
         mpl 4218539 .. 4218555 + -13.7  -4.87626   AGTAGATAGCAAAAA              GGACGGG AAT CCCGTCC              TTTTTCATATTCGCA 100 81
        queG 4232614 .. 4232625 +    -3  -4.42653   TAGATATCAATAAGA                TACT CTAC AGTA                 TTTTATCAATAACAT  60 166
LQF52_RS19145 4238976 .. 4238986 +  -3.2  -3.78775   TGAGTGGTGATCTAG                 CAGG AAT TCTG                 TTTCGTCGTGGGAAA  53 427
LQF52_RS19195 NONE
LQF52_RS19200 4252427 .. 4252442 +  -8.2  -2.82668   TAGATACGGCAGATG              GGCTGC TTAT GCGGCC               ATTTCGCGTTTGAAC  60 90
LQF52_RS19225 4257293 .. 4257303 +  -2.4  -5.00884   CTGTCGCCCACAATG                 ACCG CCT CGGC                 TTTTTTGAACGAGCT  74 279
LQF52_RS19240 4259860 .. 4259879 +  -6.4  -3.60098   TTGTATAAACGTAAA            TTGCAGAC AACC GCCTGCAA             TTTACGATAGAAAAT  62 78
        rsgA 4263168 .. 4263183 +    -4  -3.59698   CGCCCCCTTTGAGGA              TAAGTG AATC CGCTTA               TTCTCTCTGGGCTAC  53 67
         asd 4264311 .. 4264322 +  -5.8  -2.59668   GCCGTAAATAACGTC                CGAC TTTC GTCG                 CTTGTAAGAATGTTG  50 34
        mscM 4267693 .. 4267719 + -12.3  -2.71263   ATAAGAAGGGAAAAC        GGGCGGTGGCCA GATG TGGCT-CCGCCC         TACTTAAAACGGATT  82 37
        frdA NONE
LQF52_RS19290 NONE
        frdC NONE
        frdD 4272524 .. 4272547 + -13.9  -5.07652   TGAATCTGTACTTAA          CGGCCTGCA CGATAT TGCAGGCCG           TTTTATTTTCCCCGC 100 58
LQF52_RS19305 4273249 .. 4273262 +  -2.3  -4.19746   ACAGCAATGGGATAA               CCGGT GCGG AACGG                TTCTTTTAAAATGAA  57 57
        epmB 4275638 .. 4275671 + -11.7  -5.33026   TGAGTGAGTAAATAA     TGCGGTGAGAGCGGA TTGC TCCACTCTCACCGGG      TTTTTCTTTAGCTTA 100 42
        lysC 4279621 .. 4279647 + -16.7  -3.48593   AGTAAGCAACTTCTA         TCTTGTGGGGG AAACA CCCCCACAAGA         TTCTGTCACAACGTC 100 36
LQF52_RS19350 4283086 .. 4283101 + -11.8  -4.33854   TCATGATGTGAAAAA              GCCGGG GAAA CCCGGC               TTTCGTTTTATTGCT  95 52
        iclR 4291876 .. 4291886 +  -6.8  -4.83615   AGTGCTGTTCAAAAA                 CGTC TCT GACG                 TTTTTGTCCGACGTG  80 284
LQF52_RS19415 4304589 .. 4304604 +    -4  -3.54741   TCACGATCGGGGAAC              TGGATC GCCT GATTCA               TTTAGCAAGATCCTG  51 251
         def NONE
         fmt 4309779 .. 4309797 + -13.2  -2.93929   CTAATCTATTTTTCA             TACCGGCA CCA TGCCGGTA             TATCCTCTCTCTTTT  86 37
        rsmB NONE
        trkA 4312558 .. 4312569 +  -4.4   -4.2704   CCCTTCTTTTTGTAA                TGTG GGAA CACA                 TTTATTGCTGATCGA  64 26
        mscL 4313479 .. 4313492 +  -9.5  -5.46629   TCAGATATAAAAAAA               CCGGG TTTC CCCGG                TTTTTTTACGCTCTT 100 442
LQF52_RS19620 4327809 .. 4327823 +    -5  -2.71263   ATTTCGTCAATAGAC               TCATGA TAT TCGTGA               TCGTTAAGACGGGTT  47 386
        eptA NONE
        pmrA NONE
        pmrB 4338485 .. 4338496 +  -2.2  -3.11687   GCTTGCGAACCCGAT                C-GCG CAT CGCCG                TTAACTCCTCATTCC  42 186
LQF52_RS19700 4342237 .. 4342256 +   -15  -2.74701   GTGAAACAAAAAAAA            CCGCAGGC CAGT GCCTGCGG             TCATATTGCGACTAT  89 119
LQF52_RS19710 4343648 .. 4343674 +  -8.9  -5.94713   CCAGATATAAAAAAA        CCTCAGGTT-AT CTTC ATCAACCTGAGG         TTTTTTTTATGCGCT 100 74
LQF52_RS19735 4349258 .. 4349281 + -16.8  -2.55351   GTGTCCTGAAAGGTA          TAGCGAGCGG AAAA CCGCTCGCTA           CTTCATCTGAGCCAA 100 46
LQF52_RS19745 NONE
LQF52_RS19750 4351305 .. 4351319 +  -4.2  -2.82112   GAACGCGCCAAACAT               GCTAAC AAT GATAGC               TAATTACGTCTTTTT  45 61
LQF52_RS19755 4352480 .. 4352500 +  -9.7  -3.53031   TAAATAAACGCGGCG            CGTCAGACC GAC GCTCTGACG            TTAATTTCACCTCAC  71 241
         crp 4353749 .. 4353770 + -10.1  -5.93809   CCTACCAATAAAAAA           GCGTGAAGC CTCA GCCTCACGC            TTTTTTTTATGGCGA 100 57
LQF52_RS19780 NONE
LQF52_RS19785 4357268 .. 4357279 +    -3  -3.65046   TTGATATGACAATGA                GTTA AAAT TAAC                 TTGTTGAAATAAACA  50 60
LQF52_RS19790 4357975 .. 4357989 +  -2.9  -3.72027   GAATATAATTTACAA               TATCT AATTA AGATA               TTATTAATGAACCAT  52 154
LQF52_RS19795 4360171 .. 4360184 +  -3.8  -3.91084   GCGTTCGATCACATC               TGGG CGGTAT CCCA                TTTCATTCAAAATAG  56 381
LQF52_RS19805 4363253 .. 4363277 + -10.8  -4.57073   GCGTCGGGTGCTTCC         TGAGCGAGTGC TTCG GC-CTCGCTCA          TTTTTAAGAGACCTG  93 68
LQF52_RS19810 4365097 .. 4365121 + -20.1  -5.26918   AGACATGGTTCTATC          CGAGCGAGCTC TAA GAGCTCGCTCG          TTTTTTATGGAATCT 100 120
LQF52_RS19815 4366953 .. 4366977 + -14.3  -4.99861   CGTTCGGGCCGCACT          TGAGCGAACCC TAA GGGCTCGCTCA          TTTTTATCGTTAATA 100 141
LQF52_RS19820 4368313 .. 4368345 + -15.8  -3.49938   ACGTTAACGTTAAGA     T-CGACAAAGGCCAC ATCA GTGGCCTTTGTCGTA      TTCTCGGTTCTTTGC 100 54
        nirB NONE
        nirD NONE
        cysG 4380778 .. 4380803 + -14.8  -3.62775   TATCGCCCTACTCAC         CCGCTATCCG CTCTGC CGGATAGCGG          TTATTGCACCATCAT 100 50
LQF52_RS19875 NONE
LQF52_RS19880 NONE
LQF52_RS19885 4383428 .. 4383445 +  -5.5  -3.14132   CCAGTCGGCTCGCTT             CCGGCAA TTTA TTGCCAG              TTGGTAAACACAACC  54 1
LQF52_RS19890 NONE
LQF52_RS19895 4385994 .. 4386018 + -15.8  -2.73542   AGTAGTAGCAGTAAA          CCGTCAGGAG AGAGC CTCCTGACGG          TAATTGAGAGTTACG 100 66
        mrcA 4399076 .. 4399097 + -14.5   -5.4505   CACCACGTTCATTAA           TGGCCTTCC TGAC GGAAGGCCA            TTTTTTATTGAAAAC 100 48
LQF52_RS19975 4403976 .. 4403986 +  -6.8  -2.65271   AGCTCCCCCGCTAAC                 GGCA TCG TGCC                 TGCTCTGCGGTTATG  55 27
        yrfG NONE
        hslR 4405226 .. 4405238 +  -4.8  -3.27476   CTTCAGAGAAGACCC                TGCG ATCGC CGCA                TTACTCATTCGCCGT  52 50
        hslO 4406166 .. 4406183 + -11.3  -5.19998   CATTAATTTTTCTAA             CGGGTAC GAAA GTACCCG              TTTTATTTTGCTTAT 100 35
        pckA 4408183 .. 4408209 + -16.6  -4.31293   CTTTGTCGTAATCGA         AGAAAGGCGCGG ATT CCGCGCCTTTCC         TTTATTCATATCTGA 100 234
LQF52_RS20050 4422627 .. 4422650 +  -6.7  -3.18452   ACGTCAGCAATGAAT         C--CGCCCGGC ATAA GCCGGGCGACG          TTCACTTAACGTAAT  59 70
LQF52_RS20070 4426827 .. 4426837 +  -3.2  -3.30159   GTTTCTTGATCGATC                 GGTG CGT TACC                 TTCTAAAGGGGTTAA  48 32
LQF52_RS20075 4428895 .. 4428908 +  -5.3  -2.73681   AGGAATCCCGATGAG               CTTAC ACAG GTAAG                TGATTCGGGTGAGTG  49 97
LQF52_RS20085 4432971 .. 4433004 + -14.7  -3.72893   CACTATTATTTAAAA     GATGCCTGACCTCGT TTTC ATAAGGTCAGGCATC      TTTCCTGCCAAAATA 100 50
LQF52_RS20090 4433986 .. 4433996 +  -2.6  -2.61582   TCGAAAATAACCAGA                 TTAA ATT TTAA                 CTTGTGAATAAAGTC  40 49
        kdgT NONE
        kduI 4436146 .. 4436168 + -16.4  -5.37043   GAGAGTAAAATGCAG           CAGGGTGAAC GAT GTTCACCCTG           TTTTTTATGTCACCT 100 61
LQF52_RS20130 4442812 .. 4442824 +  -2.6  -4.56914   TATCCCAGAAGATGG                CGCT TCGTT GGCG                TTTTGATTTAAATCA  63 7
LQF52_RS20135 4443552 .. 4443596 + -12.9  -3.50853   TACCTCTCGGCATAA AGCCCGATGGAGCCATTTTCA TCA TGAACATGGCTCCATCATGCC TTCTACTTCGGCGGA 100 26
        gntX 4448427 .. 4448439 +  -4.1  -2.64099   GCGTTCAGGTCTGGT                GTTTG TGC CGAAC                CTTGTAGTCGGGGGG  44 6
        nfuA 4449109 .. 4449138 + -14.4  -3.34812   GCTGATTGATCTTCG       CTTTTCCTCCCC GACTCA GGGGAGGAAGAG        TATTCATTCTGTTAT 100 52
        glpD 4457726 .. 4457751 + -16.9   -4.7373   AGTACAAACACAAAA         GCGCCGTAGGT TTTT GCCTACGGCGC          TTTTTCATACCATCA 100 66
LQF52_RS20215 4469650 .. 4469688 +  -3.1  -3.12352   TTTCACCCAGTCGTT  GTGG-GTTGCCAGCAGTT GTTC GATTTCCGGCAGCGCCAC   GTCTTTTTTCAGTTT  43 351
LQF52_RS20225 4471585 .. 4471595 +  -6.8  -4.56775   CGCGCCGGACAAAAA                 CGTC AGA GACG                 TTTTTGAACAGCACT  77 174
LQF52_RS20235 NONE
        glpT 4481975 .. 4481997 + -16.3  -4.03234   TGTAAGCATCCCTCT           GGCGGCGTC CTGAT GACGCCGCC           TTTCTCTCAACAGAA 100 49
        glpQ 4483224 .. 4483248 + -14.3  -2.55213   TGAGGCTCAGCTTTC          CCATCGGGCAC GGA GTGCCCGATGA          TGCGTTGGCTCGATA  87 155
        rhtB 4485969 .. 4486001 +   -15  -3.05647   GAAAGGCCTGATTAA     GGCAGTGCGCCG-TAG CGG CTAGCGGCGCAC-GCC     TATCTATCATTCAGA  89 30
LQF52_RS20305 NONE
        rarD 4491801 .. 4491813 +  -4.8  -4.08216   TGCGGGAAACCAGAC                CAGC ATCGC GCTG                TTTTCCGCCGCCTCG  62 519
        cyaY 4501019 .. 4501034 +  -3.2  -3.86015   TCACCAGCGAGTTAA              TCCCCT GCAA ACGGGA               TTTATGCACGGAATG  54 214
        hemC 4505898 .. 4505914 +  -2.2  -3.32946   AGCCGTTTATCAAGG              GTCAAG CTCAT CATGAC              TATTCTGGTTACCCG  45 10
        hemD NONE
        hemX NONE
        hemY 4509015 .. 4509038 + -11.1  -2.92094   GCACGATTCCTTTCA          TAAGGCTCC TTTTTT GGAGCCTTA           CTCTTTTGTGTGACC  75 46
LQF52_RS20400 NONE
LQF52_RS20405 4513338 .. 4513366 +  -5.3  -3.53366   TAACAACAGGAAGGA        TGCTTGATACG CCTTGAT CGCATCAGGCA        TTATCATTCGCTCTA  56 38
LQF52_RS20410 4514173 .. 4514201 + -12.5  -3.97108   ACTAATCTCTCCCTT        CTGTGCCTTGC TTACCGT GCGAGGCACAG        TTCTCTTTTCCCCTT 100 36
LQF52_RS20415 4515450 .. 4515483 + -11.7  -2.80994   AATTCACTACACCAT     CGGCATCAGCCCGGA AATC TCTGAGCTGATGCCA      TGTCATCGCATTCAC  79 39
LQF52_RS20420 NONE
LQF52_RS20425 4517899 .. 4517915 +  -4.4  -3.14132   CCCAGAAACGTATCA              CGGTTA AGCGA TAGCCG              TTGATGAAAACACAG  50 19
LQF52_RS20430 4518776 .. 4518803 + -18.6  -3.42056   TAATAAGCAAAAAAA        TATCCGCGTCGA GGAA TCGACGCGGATA         TTATGACTTAACCGT 100 38
LQF52_RS20465 4525865 .. 4525894 + -13.7  -3.53012   TCGCAGGGAAACCGC       GTCTTGTCGGGTT GATA AATCCGGCAAGAC        TTTCGCCAGAGAAGG 100 50
        rhlB NONE
         ppx 4545708 .. 4545725 +  -8.4  -4.54727   TTAACGAGCATATAA             GGGGGA GGATTA TCCCCC              TTTTGCTTTCGCCAA  87 37
        ppiC 4548227 .. 4548253 + -12.3  -4.95155   CCCCGAACATAAAAA        GCGCGCC-GACC TTCT GGTTTGGCGCGC         TTTTTCTACTATACC 100 72
        putP 4553937 .. 4553962 + -20.5  -3.84185   CGTTTGATAAAAAAA         GAGGGCGCAGC CAAT GCTGCGCCCTC          TTCTATTTCGATCAC 100 34
        ilvY NONE
LQF52_RS20600 4557372 .. 4557402 +  -2.4  -4.28111   TATCCGGCGAAAATG       CCCGCGTATCAGAC TCC GTTTCCTGCGCGGC       TTTCTTCATGGTCTC  60 76
LQF52_RS20640 4566739 .. 4566752 +  -6.7  -3.38812   CACAAAAGCCTTGAA               TAGCG AGAG CGCTA                TATTATTCGCCACAA  61 23
        hdfR 4569396 .. 4569431 +  -7.1  -3.01726   TTTGCTCACGACCAA   C-TTAAGCACG-TCTGG CTAA CCAGAATGTGCTTAACG    CTTTCTGTAACCCAA  60 46
        fadB NONE
        fadA 4587890 .. 4587905 +    -9  -4.81523   GCCAGAAACCAAAAA              TCCCAC AGCC GTGGGA               TTTTCATTTTTACTT  90 67
        rfaH 4591085 .. 4591106 +  -2.2  -3.35679   AGACTCCATCACTAC           CGGTTGTT CTTGCA ACCAGCCG            TTCTGAATCGCCGCC  45 232
        argE 4604149 .. 4604177 + -11.7  -4.07568   CTGATCCAACGAAAG        CGGCCTTGTCAGC CAT GCTGACAGGGTCA        TTTTGAGACAGAGAA  93 37
LQF52_RS20825 4605314 .. 4605331 +  -6.9  -3.62224   CGATTAATCACCAGG             CTCTGCC ACTC GGCGGGG              TTATTAAACAGCTCT  62 434
LQF52_RS20835 4607831 .. 4607854 +  -9.5  -2.74741   CAGTCGTAACCGCGC          TCGCGGGGC CGCTGC GCCCCGCCA           TCCTTCCCCTCTAAT  69 32
         ppc 4610764 .. 4610783 +   -15  -5.00616   GTAAGTAAAAATAGG            GGCCGGTC ATTT GACCGGCC             TTTTTTGCAGAAAAA 100 82
LQF52_RS20855 4613749 .. 4613769 +   -14  -3.56568   ATCCACGATCTAAAA            CGCCACCG AAAAA CGGTGGCG            TTGGTGTTTTACTGT 100 65
        metR 4621627 .. 4621639 +  -3.3  -4.37886   CCCACGATAAAGCTC                AGCCA ATC TGGCG                TTTTATGCCAGATAG  64 52
        envC NONE
LQF52_RS20930 4631507 .. 4631518 +  -2.2  -3.57144   GGCAATGCGCCCACC                GTGA TTCA TCGC                 TTTCAGCATGGCGCG  47 344
        rfaD 4634665 .. 4634681 +  -3.8  -2.50493   TTAATCGGATAAGGA              TTCATA AGCGG TATGAA              AATTTTGGTCATCGG  44 37
        rfaF 4635721 .. 4635732 +  -2.2  -2.82742   ATTCCGGGAGCGGAC                GCAT GAGA GTGC                 TGATTGTGAAGACAT  40 20
        rfaC NONE
LQF52_RS20960 4637975 .. 4637990 +  -7.6  -2.59447   CGCTGACCGGAAAAT              GGCTAA AGAA TTAGCC               CTGTTATAATTAGCG  57 12
        rfaQ NONE
LQF52_RS20970 NONE
        waaO NONE
LQF52_RS20980 4642482 .. 4642492 +  -2.6  -5.31877   CGCTGAAAATTCATT                 TTTA AAT TAAA                 TTTTTTATGATAGAT  76 35
LQF52_RS20985 4643510 .. 4643525 +    -4  -3.14865   TAACGCTGGAGTCAA              CGATGCA TCA TGC-TCG              TCTCTCTGTTGTATT  48 101
LQF52_RS20990 NONE
LQF52_RS20995 NONE
LQF52_RS21000 NONE
LQF52_RS21005 NONE
LQF52_RS21010 NONE
        waaA NONE
        coaD 4649498 .. 4649519 +  -4.3  -3.19966   AATTTTTCAGCTAGC           TGTTGCCGG ATAG CAGGCGACG            ATATTTTTTTACGCA  49 158
       coaBC NONE
         dut 4654710 .. 4654723 +  -2.3  -3.36505   GAAATGGCTACTGTG               GCGCT AACG GGTGC                TTGTCAGTCAAATAT  45 104
        slmA 4655379 .. 4655404 + -11.9  -3.91897   CCTTAGAGATTAAAA         CCCGCCAGA TATTCTCT TCTGGCGGG          TTTCTGACTCACACG  93 48
        ycjG NONE
LQF52_RS21080 NONE
LQF52_RS21085 NONE
LQF52_RS21090 4662472 .. 4662482 +  -8.2  -2.52464   CGCGGTGGTCAATCC                 GGCG ATT CGCC                 TACGTTAGGAGACAC  59 7
LQF52_RS21095 NONE
LQF52_RS21100 4664441 .. 4664452 +  -4.4   -3.5511   ACAGGCGTTGGATCG                GTTG GCTG CAAC                 TCTTTATCCATAAGC  54 1
LQF52_RS21105 NONE
LQF52_RS21110 4666364 .. 4666376 +  -9.1  -2.57931   AAAACGCCCGATATC                GGTGC ATT GCACC                ATTATCGGGCATCAA  66 66
LQF52_RS21115 4667453 .. 4667463 +  -2.4  -3.47806   TCACGACAGACGCTA                 CGCC ACG GACG                 GTTTTTCCTATCCCC  47 42
LQF52_RS21120 4668438 .. 4668457 +    -5  -5.86976   TCGTCAGGATAAAAA            GGCCAT TGTAAATC ATGGCC             TTTTTTGTTTTATGA 100 65
LQF52_RS21150 4676630 .. 4676644 +  -6.4  -3.32066   ACAAATAGTTTACCA               GACGTT CAT GACGTC               TTATCGCCCCTTATT  59 33
LQF52_RS21160 4677524 .. 4677545 +  -5.1  -3.64703   GGTTGATACCTAGCT           GGTTTGCGA CAGT TTGCCAACC            TTTCACTGCGCCAAG  58 230
LQF52_RS21175 4680285 .. 4680295 +  -3.2  -4.37886   ACCCAAATGCATTAT                 TGGT GTA GCCA                 TTTTCTGGCGCATCA  64 414
LQF52_RS21185 NONE
LQF52_RS21190 NONE
LQF52_RS21255 4695557 .. 4695573 +  -6.5  -3.06162   GCAAGTGAGATTAGG              CGAAGGC AAA GCCTTCA              TCTTCCCATCCCGTG  56 75
        ftrA NONE
LQF52_RS21270 4698452 .. 4698466 +  -3.5  -4.49317   GTTAGCCAGTCATCA               CGCTT ATCTA GAGCG               TTATTTATTTCTTTT  64 214
LQF52_RS21275 4699784 .. 4699798 +  -7.2  -3.72576   AAATCTCAAACTACA               GATAAC GGT GTTATC               TTTGATGCCAAAAAG  65 468
LQF52_RS21290 4702602 .. 4702619 +  -9.8  -3.25088   CCAACCTAATGATAA             GGCGCG CACCCT CGCGCC              TTCCTGCCTTTCCCG  72 48
        xylA 4709591 .. 4709623 +   -10  -2.57132   GCTCACTACGTCACA     CCTACTGCGACAG ACTAAACC CTGTCGCAG-AGG      CTTATCAGGAGCCAC  70 49
        xylB 4711410 .. 4711426 +  -5.1  -2.72012   ATGTAAAATGTCTGG              GTGAACG TAT CGTTCAA              TAATGTGTGGTGCTT  47 338
        fdhD 4714922 .. 4714947 +  -2.5  -2.66552   GAGACACCACCAGAG         T-CGCGGCGTTT TGC AGGCGACGCGCA         TAGATTAATTTGTTT  40 41
        sodA 4715819 .. 4715843 + -14.5  -5.55769   GCGTTTGAATATAAA          CTGGAATAACA GCC TGTTATTCCAG          TTTTTTATTATCCCC 100 76
LQF52_RS21345 4717991 .. 4718009 + -14.6  -3.14564   ACCAAAAACGACAAA             GCCCCTGT TAA ACAGGGGC             TTCATCAACGAATCC  95 56
LQF52_RS21390 NONE
LQF52_RS21395 4729498 .. 4729517 +  -3.6  -4.10657   CGCGAAACCGATTCT            GAGATCAGG CTT TC-GATCTC            TTTTGCCGCCTGTGA  60 514
        ghrB 4732389 .. 4732414 + -11.9  -3.08508   CTTAAGTCGACCTTA         GCGCTGCGA CGACGCTT TCGCAGCGC          TGCTTTTCCCCGCTC  81 42
LQF52_RS21410 NONE
LQF52_RS21415 NONE
LQF52_RS21420 NONE
LQF52_RS21425 NONE
LQF52_RS21430 NONE
LQF52_RS21435 4740029 .. 4740061 +    -4  -4.53857   CGTTGCACGATAGCA      AATCAGGCGACACG ATATC TGCGCCGCCTGATG      TTATTTATTTTTAGT  66 46
LQF52_RS21440 NONE
LQF52_RS21445 NONE
LQF52_RS21450 4741884 .. 4741914 +  -6.1  -2.52464   TCAAGTTTTCACACC       GCACCACTGCG GATAATCAG TGCAGTGGCGC       TAACTTACCGCCGAG  53 51
        dsbG 4743578 .. 4743603 + -11.2  -3.68292   TGATGGGGAAATAAG         CG-CAGGAGGG GCTCG CCCTCCTGACG         TTGTCTCTTAGCGAT  87 27
LQF52_RS21470 NONE
LQF52_RS21475 4745334 .. 4745365 +  -4.4   -3.7398   GGTGGATATAAAAAA      TGCTGGCCAAATAG CTCA CTATTCAACCAGCA       TGTTTTCGCTTCCCA  58 50
LQF52_RS21490 NONE
LQF52_RS21495 4751697 .. 4751712 +    -4  -3.53091   AAGCCGATCTGCTCC              CGC-TCT TCC AGACGCG              TTTGCGCCCAGGCCT  51 311
LQF52_RS21505 4754152 .. 4754189 +  -6.7  -4.62069   GCGACTTGCTGGCTG   CTGCCCGGCAGCGGCGC ACTG GTGACGGGGGCGGGCGG    TTTTTCCGATGGCGC  78 394
        prlC NONE
        rsmJ 4762229 .. 4762239 +    -4  -2.88861   GCATTTCCTACGCTG                 CTTT TGC AAAG                 TCTGTGGCACTAATG  46 97
LQF52_RS21540 4764218 .. 4764228 +  -4.6  -2.72511   TAACCGACATTATCT                 CTCG CTG CGGG                 CTTTCCAGCGCTCGC  47 38
        uspB 4768740 .. 4768761 + -10.2  -5.24129   GATAAAAAGTAAAAA           GGCGATTC CCCACA GAATCGCC            TTTTTTATGACGGAC 100 104
LQF52_RS21570 4771883 .. 4771895 +  -3.3  -3.16564   GCGAGCAGGGTAAAC                GGTTC ACT GTACC                TTGCTCGCCTCAACG  46 62
LQF52_RS21575 NONE
LQF52_RS21580 4774814 .. 4774835 +  -7.2    -3.376   GAAAAACAGTAATAA           CCGGCAGA AGCTTG TCCGCCGG            TATTCTATAATTGGC  63 29
         gmk 4780588 .. 4780619 +  -3.7   -3.5721   ACCAAACTATTGGCA      GACTGACGCCTCTT TCAGT ATGATGCG-CAGTC      ATTTTATTTCCTGTG  53 20
        rpoZ 4780900 .. 4780918 +    -3  -3.14132   TTCAGGCGGTTACCG             CGATTGCT GAA GGCCGTCG             TTAATCACACCACGA  45 3
        spoT NONE
        trmH NONE
        recG 4785822 .. 4785834 +  -3.3   -3.9407   CACCAACGCCTAATC                GCAGC AGC GCTTC                TTCATTTTTCTTAAA  55 28
LQF52_RS21630 4787406 .. 4787444 +   -17  -2.98942   TTCTGTTCAGTTCAT  GT-AAAAGCGAGCGGTG ATGCAA CACCGCTCGCTTTTTAC   TGTCTGTAACAGCAT 100 58
LQF52_RS21635 4789353 .. 4789367 +  -8.6  -3.55563   TTACATGGATAATGA               GATGGA CGC TCCATC               TTTACGGCATCAGAT  71 156
LQF52_RS21640 4790778 .. 4790794 +  -6.5   -3.4811   TGTCAGCAACATCAC              CCAGTGA GAA TCACGGG              TATTATTATGGCGAA  60 357
        glnA 4797012 .. 4797029 + -11.3  -5.00616   CGTGGAAACGCTTCA             GCCCATC TTCG GATGGGC              TTTTTTCACCACCGG 100 216
        glnL NONE
        glnG 4799609 .. 4799622 +  -3.9  -2.52516   TTTTTTATTGCTCAA               TTGTT AACA AACAA                ATTGGTGATAAAAAA  44 50
LQF52_RS21680 4800073 .. 4800102 + -14.4  -5.96894   TAAAACGTTTGAGAA       CAGCCAGTCGGT ACTAAC ATCGACTGGCTG        TTTTTTTATTTACGT 100 248
        yihA 4803825 .. 4803854 + -13.5  -2.73875   ATAAAGCCCATAAAA       AACGCCCCGCTCA AAAC TGAGCGGGGCGGC        TAATATTCAGCCAAA  86 197
        mobA NONE
        mobB 4810534 .. 4810555 + -15.9  -4.39407   CAGCCATAGCAAAAA           GCCCCTGTC TTGC GACAGGGGC            TTTTCACTTGTTTGA 100 32
LQF52_RS21795 NONE
        qseC 4824879 .. 4824917 + -14.7  -3.68351   AGATACACGGTCGAC  CACGGGG-CGAGGTATCCC TGC GGGA-ACCTCATCCCCGTG  TTTCCCTAATAACAA 100 73
        ravA NONE
        viaA 4830355 .. 4830372 +  -9.1  -3.06261   ACGTTCTTCATCCTG             CGTCAGC GCCA GCTGGCG              TGTTAAGGCTTCCGC  63 211
        asnC NONE
        mioC 4832552 .. 4832571 +  -5.1  -4.56702   GAGATCTAATAAAGA            GATCTTT AAATAA AAAGATC             TTTCTTTAATTAACG  71 272
        mnmG 4834610 .. 4834627 + -11.3  -5.29445   AACTTATCCCCTAAA             TAGCCGG TTAT CCGGCTA              TTTTTATTATTAACC 100 50
        rsmG 4835336 .. 4835358 +  -6.3  -2.70932   TATTGCGCGTCAGGA           TGCCACC TCGTCTATC GGTGGCA           TGGTTCCAGAACGCA  53 73
        atpI NONE
        atpB NONE
        atpE NONE
        atpF NONE
        atpH NONE
        atpA 4840045 .. 4840078 + -14.5  -3.53012   CCCAGTCCTGGTAAC     GCCCGGTGGCCTGCT GTAA AGCAGGCCGCAAGGC      TTTGAGGAGAAGCAA 100 27
        atpG 4840968 .. 4840980 +  -3.4  -3.36968   GGTTTAAAGCAGGTT                TACG AATTA CGTA                TTGTCGAATTACGTA  48 34
        atpD NONE
LQF52_RS21885 4842852 .. 4842877 + -17.7  -5.19879   CTTGCAATAATAGAA         GGCCAGTCAGT TCAC ACTGACTGGCC          TTTTTGTATTTAAGG 100 49
        glmU 4847248 .. 4847270 + -12.7  -3.10112   AGAAATAATATTTAA           TGCCTCCGC ACGCG GCGGAGGCG           GTTTTGCCCTGTGCT  83 33
        glmS 4849286 .. 4849315 +   -13  -5.72616   TATGGGTTATTACTG       TCCGCCTTATGT CGCAAA GCATAAGGCGGA        TTTTTTTATATCCAT 100 54
LQF52_RS21905 4849916 .. 4849949 +  -2.4  -5.70522   AGATTAAATAATTTT     AATAGTCGGATATC TTCATT GCTATCCGACTCTA      TTTTTTGTTGTTCTT  86 30
LQF52_RS21910 NONE
LQF52_RS21915 NONE
LQF52_RS21920 NONE
LQF52_RS21925 NONE
LQF52_RS21930 NONE
LQF52_RS21935 4853788 .. 4853801 +  -2.3  -3.12351   CAGCGTCTGAGGAAG               CGCGT ATGA ACGGG                TTCACTGTCCGCACC  42 17
LQF52_RS21940 NONE
LQF52_RS21945 NONE
LQF52_RS21950 NONE
LQF52_RS21955 NONE
LQF52_RS21960 NONE
LQF52_RS21965 NONE
LQF52_RS21970 NONE
LQF52_RS21975 NONE
LQF52_RS21980 NONE
LQF52_RS21985 NONE
LQF52_RS21990 4864941 .. 4864964 +    -6  -3.86897   CACAATGTACCAGAC          CATCATTTCC AGCG GGAGACGATG           TTTATGCAGAGTGAC  66 238
LQF52_RS22005 4867277 .. 4867287 +  -2.4   -4.8622   TTCTTACGACTAATT                 TGGG AAG CCCC                 TTTTTAATTAACGCA  66 199
LQF52_RS22015 4869553 .. 4869578 + -11.7   -4.1899   GAAGTAAAGACCAAG         CACGCGGCGGG CCAT CCCGCCGCGCA          TTTTCCATCGGATGC  95 34
LQF52_RS22020 4870286 .. 4870306 +  -2.5  -4.27617   CAGTCAGAACGCCTG            TTCTGGC TGGTGAT GCCTGAA            TTTTCCTGCACTCTG  58 6
        pstS 4871604 .. 4871624 +  -6.9  -2.53392   AGTCGTATCGGGGCG            GAGAGGT GATAGCA ACCTCTC            TGCCTTCAACAGTTT  54 120
        pstC NONE
        pstA NONE
        pstB NONE
        phoU 4875144 .. 4875167 + -15.4    -5.252   TTGTGATTTTCGTGA          TAACGCCCTG CTTG CAGGGCGTTA           TTTTTTATCAGGATA 100 49
LQF52_RS22055 NONE
LQF52_RS22060 4877631 .. 4877664 + -19.7  -3.07506   GGACTAGCATAAGAA     CGACAAAGGCTCACC ATAT GGCGAGCCTTTGTCG      TATATCTACTTCTGT 100 95
LQF52_RS22065 4878539 .. 4878551 +  -2.7  -3.79177   CTGAAGTAACATAAG                GTTAT ATT ATAGC                TATTTATGTTATTTC  52 155
LQF52_RS22070 4879492 .. 4879511 + -13.6  -3.23279   AGTGCTATGATCTCA            GCCCTCTG CATG CAGAGGGC             ATTTCTATTTGTACC  93 55
LQF52_RS22075 NONE
LQF52_RS22080 4881203 .. 4881216 +  -2.3  -4.24342   GTCAGTAACCTCAAA               CTGCC TTTT GGTGG                TTTATTCCTGCGCAG  57 198
LQF52_RS22090 4883736 .. 4883747 +  -2.2  -3.52678   GCGTAAAGACTGGCG                CTGC TGTT GTAG                 TATTTCTCCCGACTT  47 153
LQF52_RS22110 4888258 .. 4888268 +    -4  -2.78715   AATGGAATAGGAATA                 TAAC CAT GTTA                 TCTCATAAGAAAATT  45 39
LQF52_RS22115 NONE
LQF52_RS22120 4889328 .. 4889349 + -12.3  -5.60689   CCGCTACATCATCAA           CGCCGTTCG TGAT TGAACGGCG            TTTTTTATTGTCTGA 100 75
LQF52_RS22130 4891701 .. 4891717 +  -6.5  -2.79183   CTCGCCAACCTCTTT              GCCTAAC GGT GTCAGGC              TGTACTCAACATGCG  52 183
LQF52_RS22140 4892983 .. 4893016 + -13.3   -4.2704   AACACTTAAAAATTT     TTGACCATTTTCCTG ACGG CAGGAAAATGGTCTG      TTTCTTCATAGTCCG 100 39
LQF52_RS22145 4893796 .. 4893812 +  -3.7  -3.04144   CTCAATTCTGTATGA              CGATG AGTATTC CATCG              TGTTGAAACTGAAAA  47 191
        rhuM 4895252 .. 4895266 +  -3.5  -3.78934   TTCACTCAGAGACTG               CTGTG CCAGC CGCAG               TTCTTCTGCCAGCAA  56 319
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC 4896609 .. 4896631 - -16.4  -5.41143   CAGCCGTTAAAAAAA           TAAGGCGGTC AAT GACCGCCTTA           CGCTTTCTATCGGTT 100 55
        mnmE 4895104 .. 4895134 - -10.6  -5.17576   CATCAATGGAAAAAA       GATCTCGCATAA AAATCAG CTATGCGAGATC       AGCGGAAGTGAATGG 100 59
LQF52_RS22135 4891397 .. 4891413 -  -2.1  -3.16742   CTGAATTCGCAGGAA              GGGCGAG ATG CTCGGCT              GGCGTTTCTGGCATC  43 205
LQF52_RS22125 4889328 .. 4889349 - -11.6  -3.24747   CCGCTACATCATCAA           CGCCGTTC GTGATT GAACGGCG            TTTTTTATTGTCTGA  81 59
        aegA NONE
LQF52_RS22100 4884497 .. 4884510 -  -2.4  -3.77285   GATCTAAAGAAAAAT               CGAT GGATAA ATCG                GCGATAATTATCAAT  51 114
LQF52_RS22095 4883420 .. 4883430 -  -8.2  -3.07113   GATGACTTGACGGAA                 GCCG TAC CGGC                 CTTTATTACCGCGGT  60 259
        yieH 4881097 .. 4881123 -  -7.3  -2.99445   AATAGAAGAGTAAAG        CG-TTTGCGCCA GGGA TGGCGCAATTCG         AGCTTACATGGATGT  60 120
LQF52_RS22050 4875147 .. 4875164 - -12.7  -3.29144   TGATTTTCGTGATAA             CGCCCTG CTTG CAGGGCG              TTATTTTTTATCAGG  90 26
LQF52_RS22010 4866922 .. 4866936 -  -5.6  -3.91897   CTGCCTATGCAGAAA               CACCGC CGC GCGTTG               TTTACGAACTCACTC  61 409
LQF52_RS22000 4865558 .. 4865583 -  -8.3  -3.87977   CAACACCATAAAACA         GGGCTCTTGAC CTCA ATCAACAGCCC          TTATCGTTCCACGAT  76 217
LQF52_RS21890 4842852 .. 4842877 - -17.7  -3.83318   CTTGCAATAATAGAA         GGCCAGTCAGT TCAC ACTGACTGGCC          TTTTTGTATTTAAGG 100 459
        asnA 4830028 .. 4830054 - -13.8  -2.83119   AAGCCGTCAGAAGCA         GCTACAGCATCG TTT CCATGCTGTAGC         GATGTCCGATCATGG  79 137
         kup 4824792 .. 4824811 - -13.6  -3.15544   GGTCACGTTCACCAA            TCAGCCCG GAGG CGGGCTGA             TTGTGTCGGTGAATT  93 197
LQF52_RS21790 4822126 .. 4822145 -   -15  -4.31166   TGATAAATAGAGAAA            TGGCGGGC CAAA GCCCGCCA             ATAAGGAACAGAGGA 100 48
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB 4818098 .. 4818120 -   -12  -2.78813   CGCTACGTTAATAAT           GCGCCACC ACAAACG GGTGGCGC           GAGCCCTGCTTTATT  79 47
        rbsK NONE
        rbsR 4815983 .. 4815995 -  -4.7  -3.40403   TTCCTTTCACCACAA                CTGCG TGT CGCTG                TTGCCGTGTCAGTGG  52 175
LQF52_RS21755 4814043 .. 4814053 -  -3.2   -4.8048   TGGGGACACGAAAAA                 TCCG TAC CGAA                 TTAAAAATCCGGCAC  69 147
LQF52_RS21750 4813889 .. 4813926 -  -6.5  -3.45839   ATTGTTAAAGAGCAA   TATCGTAAACATGACTC CGAA GAATCATCTTTAAGATA    TTCATGATAATGTCT  60 58
LQF52_RS21745 4810802 .. 4810812 -  -6.8    -4.431   GAGTCACTCACAAAA                 CACC TTT GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 4810534 .. 4810555 - -15.9  -4.81551   CAGCCATAGCAAAAA           GCCCCTGTC TTGC GACAGGGGC            TTTTCACTTGTTTGA 100 42
LQF52_RS21725 NONE
LQF52_RS21720 NONE
        dsbA 4807204 .. 4807227 - -12.5  -2.64912   GCGGGAAGGTATAAG          GTCATGCGG TTTCAC CCGCATGAC           TTATTAAATAATTAC  81 37
        polA 4803827 .. 4803852 - -20.5  -5.28826   AAAGCCCATAAAAAA         CGCCCCGCTCA AAAC TGAGCGGGGCG          GCTAATATTCAGCCA 100 244
        yihI NONE
LQF52_RS21695 4801858 .. 4801871 -  -6.7  -2.81543   GATCACCAAAAAATG               GCGTT CAAA AACGC                TCCCGGCGTTTTGCT  55 240
        hemN NONE
LQF52_RS21685 4800073 .. 4800102 - -12.9  -3.33009   TAAAACGTTTGAGAA       CAGCCAGTCGGTA CTAA CATCGACTGGCTG        TTTTTTTATTTACGT  95 31
        typA 4793169 .. 4793190 - -15.9  -2.55034   AAAGCGCATAAAATT           CAGGGCACC CGAA GGTGCCCTG            TTGCGTAACAAGACA 100 54
        yihX 4792417 .. 4792433 -  -9.3  -3.04792   TTATCATTCCCAATA              GGGGCTG TGT CCGCCCC              TGCGATATAAATCAT  68 37
         dtd NONE
        fabY 4790774 .. 4790784 -  -5.4  -3.13522   ACTTTGTCAGCAACA                 TCAC CCA GTGA                 GAATCACGGGTATTA  54 120
        ligB 4777920 .. 4777931 -  -5.8  -5.45813   CACGAAAAAATAAAA                TGGG CGAT CCCA                 ATCTGTTATGAAAAA  87 51
        eptB 4775933 .. 4775948 -  -6.2  -3.05521   ATTAGAGCGTCAATA              CCTTTT TAGC AAAAGG               ACTTCAGCTGCCGTT  56 99
LQF52_RS21590 4775734 .. 4775751 -  -2.8  -3.09823   GCTCTTAAAACGAGA             CTATTT TTAAAC AAATAG              TATGCATAGACGATG  43 88
LQF52_RS21585 4774814 .. 4774835 -  -9.4  -3.91821   GAAAAACAGTAATAA           CCGGCAGA AGCTTG TCCGCCGG            TATTCTATAATTGGC  81 44
        pitA 4768740 .. 4768761 - -10.9   -5.2197   GATAAAAAGTAAAAA           GGCGATTCC CCAC AGAATCGCC            TTTTTTATGACGGAC 100 125
        uspA 4767276 .. 4767297 - -12.3  -4.84311   TGTTATATAACAAAA           GGCACAGCT AAGA AGCCGTGCC            TTTCATCACTGAAAA 100 63
        gdhA 4765658 .. 4765687 - -13.7   -4.0386   GAAATAAGTGAGAAA       TCAAAGCGCCTGC GAAT ACAGGCGCTTTAA        GTAAAGCAGGTGTTA 100 38
LQF52_RS21545 4764107 .. 4764151 -   -15  -3.87994   ACGCAGCGGGAGAAA CGCGT-GGCGGAACTGACGCA ACAG CGCGACAGTGCCACCAACGCG TTAACCAAACAACGT 100 86
LQF52_RS21525 4756349 .. 4756369 -  -5.5  -3.96216   GCGCCATTTAAACAA            TAAGAATGA TAA TCGTTCTTA            TTTATGTTTTTTCCC  63 155
LQF52_RS21520 NONE
LQF52_RS21515 4754790 .. 4754802 -  -4.9  -5.02201   AAAACAGCATAAAAA                GTAAT GTT ATTAC                GTTTTAGCAGGATAT  77 42
LQF52_RS21510 4753340 .. 4753359 -   -10   -3.1978   AGGCGCAGATCAATA            GCCC-GCTC GGC GAGCAGGGC            AATAGTATATACATC  74 460
LQF52_RS21500 4751498 .. 4751529 -  -7.2  -2.50994   GGCAACCGCAGGAAT      CCCCAGGAGCTTAC TCAA GTAAGTGACTGGGG       TGAGTAAGGGAAGCC  57 75
LQF52_RS21485 4746833 .. 4746863 -  -5.4  -4.17556   CATACGCCGAATAAA       GGTTATGCCTATGG TTG CGATAGGAAAAACC       GACCGCGTCACCCAC  67 55
        gorA 4745334 .. 4745365 -   -11  -5.36441   GGTGGATATAAAAAA      TGCTGGCCAAATAG CTCA CTATTCAACCAGCA       TGTTTTCGCTTCCCA 100 72
LQF52_RS21465 4743578 .. 4743603 - -11.2  -2.95204   TGATGGGGAAATAAG         CG-CAGGAGGG GCTCG CCCTCCTGACG         TTGTCTCTTAGCGAT  78 33
LQF52_RS21455 4741723 .. 4741736 -  -3.1  -2.83908   AAAGCTACTAGCAGA               CTTCC TCAA AGAAG                CTGAATGCGTTGAAT  41 208
LQF52_RS21400 4729009 .. 4729030 - -10.1   -3.4582   GCAGTGGACGAAATA           GGGAGCAGC CAAC GCCACTCCC            TCCGGTTCAATAGAT  77 69
LQF52_RS21385 4726898 .. 4726916 -  -7.5  -3.56092   TCATCATCTTTCAAA             TTTCAGG ATCAG CCTGAAA             AAACGGTCTGCAACA  65 15
        glyQ NONE
        glyS 4723732 .. 4723759 - -11.3  -4.61482   CGCGGGAAAAAATAA        CCCCCGAA-CGG GCGAA CCGACTCGGGGG        TTGGGATTACGTAAC 100 51
LQF52_RS21370 4722767 .. 4722783 -  -9.4  -3.57462   TATCGCATCGCTAAA              GCGTCG GGGCA CGACGC              GGTTAGGGATAATTC  77 28
LQF52_RS21365 4720409 .. 4720429 - -10.4  -5.44837   AAAAAAACATAAAAA           GAGGCCGCC CGCA GGCGGCC-C            TAGCCACATCAATTA 100 38
LQF52_RS21360 NONE
LQF52_RS21355 4718450 .. 4718460 -  -3.2  -3.82592   ATAACGGGAGAATAA                 TGCG GGG CACA                 GCATACACTATACGC  53 112
LQF52_RS21350 4717984 .. 4718016 - -15.7  -4.77157   GCAACGTACCAAAAA      CGACAAAGCCCCTGT TAA ACAGGGGCTTCATCA      ACGAATCCATCACCA 100 67
LQF52_RS21330 4712139 .. 4712149 -  -4.6  -4.18762   AAGCGCTATTCAAAA                 CAGC GTA GCCG                 TTGTTAAGCGCTGAC  64 193
LQF52_RS21325 4710795 .. 4710806 -  -7.2  -2.85351   GCGCTGCATATGACA                GGGC TCAA GCCC                 GATAGTATTACGCTG  55 331
        xylF 4706652 .. 4706662 -  -5.4  -3.04144   TTTTCATTTCCAACA                 GATG CGG CATC                 GTGGCCCCCGTGATT  52 141
LQF52_RS21305 NONE
        gguB NONE
LQF52_RS21295 4702602 .. 4702619 -  -9.8  -3.54109   CCAACCTAATGATAA             GGCGCG CACCCT CGCGCC              TTCCTGCCTTTCCCG  75 52
        argG 4700196 .. 4700220 - -10.7  -6.08563   AACAGATAAAAAAAA          TCCGGAAGCGC GAG ACGATTCCGGA          TTTTTATATTACTCA 100 50
        carI 4699085 .. 4699108 - -10.4  -5.22312   ATGCATATGAAAAAA          TCATCTCCCT TTGC AGAGAGATGA           TTGAAAGTAAAAAAC 100 242
LQF52_RS21260 4695555 .. 4695575 -  -7.5  -2.66912   AGGCAAGTGAGATTA            GGCGAAGGC AAA GCCTTCATC            TTCCCATCCCGTGAT  57 2
LQF52_RS21250 NONE
LQF52_RS21245 NONE
LQF52_RS21240 4692132 .. 4692147 -  -3.2  -2.91452   ATCAGCGGAATCATA              GGTCAC CCTC GTGACA               CAGCCGAATTTCGAC  44 5
LQF52_RS21235 NONE
LQF52_RS21230 NONE
LQF52_RS21225 NONE
LQF52_RS21220 NONE
LQF52_RS21215 NONE
LQF52_RS21210 4685815 .. 4685834 -  -7.1  -2.87132   CGGGGCGGTGACAGA            CGCCGCA TTCCAC TACGGCG             TCTATCTGTGAAGCA  59 49
        aldA 4684025 .. 4684058 -  -7.3  -2.96638   TTAAAGATCGAGATA     CCG-GGGGCTACCACG GTG CGAGGTATCCCTGCGG     GAACCTCATCACCGT  59 96
        lldD 4682720 .. 4682759 -    -2  -3.98236   AAATGCCAGCAGAAA  GCGCGGCGAAAAGGCGGTA ATG CAATGCCTCT-CACCGCGT  CATCCGTGCTTATAG  53 35
LQF52_RS21195 4681341 .. 4681377 -  -7.3  -3.64703   TGGTTCTTAGCCAAA   GCCCCCGCAGGCGT CGTGTGGATC ACGCCCG-AGGGGC    AAGAGAGTTGGACTT  67 53
LQF52_RS21180 4679473 .. 4679488 -  -4.6  -3.40403   CGCCTGTGAGTACAA              GCCGCA GTTT CGCGAC               TGTACCGTAGAAAAG  51 481
LQF52_RS21170 NONE
LQF52_RS21165 4676976 .. 4676990 -  -8.6  -5.46657   TAGCTCAAGAAAAAA               CTACGA TTC TCGTAG               TCATGATGACAAGAC 100 503
LQF52_RS21155 4676202 .. 4676224 - -13.4  -3.34192   AATTGGTCTAATCAA           GCCCACCTTC TAA GGAGGTGGGC           TTTCGCTTCATTTTA  95 436
LQF52_RS21145 NONE
LQF52_RS21140 NONE
LQF52_RS21135 4669989 .. 4670029 -  -2.5  -5.24796   CCTACACAAGAAAAA  GGTCTACAGATTGTTACGT GAT AAGTAACTTAGTGTAGACC  TATTAAACCTGAGTA  76 248
LQF52_RS21130 NONE
LQF52_RS21125 4668438 .. 4668457 -    -5  -4.91109   TCGTCAGGATAAAAA            GGCCAT TGTAAATC ATGGCC             TTTTTTGTTTTATGA  77 61
         rph 4656095 .. 4656110 - -10.4  -5.76633   TCAGATATAAAAAAA              GCGACC AATT GGTCGC               TTATAAAATCAATCG 100 34
        pyrE 4655379 .. 4655404 - -11.9  -4.39166   CCTTAGAGATTAAAA         CCCGCCAGA TATTCTCT TCTGGCGGG          TTTCTGACTCACACG  95 41
        radC 4652072 .. 4652085 -  -6.7  -3.76373   TCCCGAACAGCTAAA               GATCC CATT GGATC                GCGGAAATATCTGTT  66 39
        rpmB NONE
        rpmG 4651410 .. 4651425 -  -8.2  -5.75342   TGTGGCGAAAAAAAA              CCCGAC CAAG GCCGGG               TTTTCATCAAGAAGC 100 46
        mutM 4650376 .. 4650398 -  -3.6  -4.08064   AATGCCCTCTGAAAA           TTTTTATATT TAG ACTATAAAAA           CTGAAAAAGAAAAAT  57 45
LQF52_RS21025 4649279 .. 4649290 -  -5.8  -3.90744   TCTCTGGTCAAAGAA                GTGG CTCG CCAC                 GGTGGTGACGTATCA  63 106
LQF52_RS20940 NONE
         tdh 4631003 .. 4631022 -  -7.8  -3.67296   CAGCAGCCAGTCAAA            CCGCGTAA TCCG TTCCGCGG             CATACAGCAATGTCA  65 243
LQF52_RS20920 NONE
        secB NONE
        gpsA 4626509 .. 4626533 -  -9.3   -2.8028   AAAATGAAGATACTA          TGAGCCTCCCA GAT TAGGAAGCCCA          GCATAGAACGACGTG  66 43
        cysE 4625504 .. 4625522 -  -3.1  -5.77677   CAAAATAACAAAAAA             CCACC TTATTTATC GGTGG             TTTATATTCTGGTTG 100 92
        pagP 4624542 .. 4624563 -  -9.5  -3.28003   CTAACACAGCAGTAA           CGATCCCAGT AAT AC-GGGATCG           TTAACAGCTTATATT  74 91
LQF52_RS20895 NONE
LQF52_RS20890 NONE
LQF52_RS20885 4622453 .. 4622467 -  -4.3  -2.66733   TTGTAACGGAGATGA               CTGAA TGAAT TTCAG               TCAATATGGTTTACA  46 200
LQF52_RS20880 4621314 .. 4621328 -  -2.8  -4.11216   GCCCTACGCTGAAAA               GCGT GGACAAT ACGC               TGCTGCTGATTCAGA  58 203
        metE 4617867 .. 4617906 -  -7.4  -4.64861   TTTCGGGAAAATAAA  TACGCT-TTATGGGTATTT TAA ACATACCCATAAGAGAGTA  ATTGCAGGTGTACTT  82 415
LQF52_RS20865 4616080 .. 4616103 - -12.4  -4.20148   AGTACCTGAAAAGAA          TCAGGGAGGC TGTT GCCTCCCTGT           GGGATAGTGTTGCGT 100 75
LQF52_RS20860 4613749 .. 4613769 -   -14  -4.21462   ATCCACGATCTAAAA            CGCCACCG AAAAA CGGTGGCG            TTGGTGTTTTACTGT 100 60
         udp 4611732 .. 4611759 - -12.8  -2.82834   GAGGCTATCAGGATA        CGGGCTGGC-ATC GAT GATAGCCAGCCCA        AAATACCATCAATCT  82 47
LQF52_RS20845 4610763 .. 4610784 - -11.5  -3.03121   AGTAAGTAAAAATAG           GGGCCGGTC ATTT GACCGGCCT            TTTTTGCAGAAAAAT  79 90
LQF52_RS20830 4604695 .. 4604711 -  -7.3  -2.63596   TGCGATTTCACACTA              CCTGACA CAT TATCAGG              CGGTTAACGTCACCA  54 228
        argC NONE
        argB 4600933 .. 4600960 -    -2  -2.72746   CAAAAATATAATTCA        CGTTGGTATCGCA TCA TGCCATACCCA-G        AAACGACTTACGCCA  40 33
        argH 4599480 .. 4599511 - -11.6  -3.97368   TCGGTAACGCAGAAA      TCCCCCCAACGCGA AACA CCACATTGGGGGAA       CTGAAACAGAAGAGG  91 46
        rmuC 4597738 .. 4597758 -  -2.6  -3.55622   GCCAAGCCCGCGAAA            TCCATACC TATTT AGTATGAA            TCAGTACGGGTAGCT  48 16
        ubiE NONE
LQF52_RS20790 NONE
        ubiB 4594538 .. 4594569 -  -3.8  -2.79809   CAAAAAGGGGAACGA      CAGAATT-CTCGTTA TTA TATCGGGTAATTCTG      GCGTGCATCATGATC  45 45
        tatA 4594242 .. 4594254 -  -4.1  -3.13071   AACCGATATCGAACA                CAGAT TAC ACCTG                CTCTTTATGCTGGCT  48 17
        tatB 4593631 .. 4593647 -  -2.9  -3.86897   TTCATCGGCCATAAA              CTAACGA CTA TCGCTCG              GTTGGCGGGCAGAAA  54 9
        tatC 4592825 .. 4592843 - -13.2  -4.81306   GCGAATAAAAAATAA             GACCTCTC AAA GAGAGGTC             ATTTTACCGTCCTGC 100 57
        tatD NONE
        hemB 4590857 .. 4590871 -  -4.2  -3.39036   ACAGAGCATTGATAA               CCGCGA GTT TCGCAA               AGCCTAATCCTTTGA  50 128
        ubiD NONE
         fre 4587890 .. 4587905 -    -9  -5.04601   GCCAGAAACCAAAAA              TCCCAC AGCC GTGGGA               TTTTCATTTTTACTT  93 59
        pepQ NONE
LQF52_RS20725 NONE
        trkH NONE
        hemG 4580130 .. 4580141 -  -4.4  -3.17075   CCGCTGTGAAGTCAA                GTCA TTAC TGAC                 CACCTTCGTTGAATC  50 185
LQF52_RS20710 4578356 .. 4578376 -  -2.5  -3.10522   ACTTCACTTAACACA            CATCTTCTT GGT AAGGAGGTG            ATCCAACCGCAGGTT  43 16
LQF52_RS20705 NONE
LQF52_RS20700 4578041 .. 4578078 -  -2.7  -4.49756   TGTTAAAGAGCAAAA   TACTTCGCAGCATACTG TTTC CAATACGCTCTGAAGTC    TTTTATATAGCAGAT  63 46
LQF52_RS20695 4574953 .. 4574963 -  -6.8  -4.40358   AGTCATCTCACAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 4574690 .. 4574703 -  -4.5  -2.82742   ATTTCTCTACAACCA               CCAGA TTGC TCCGG                CTTACTGCTTAATTT  47 44
LQF52_RS20685 4574554 .. 4574581 - -15.8  -3.05536   AAATTACGCTTAACA        TTATGCCTGCTA AAGT TAGCAGGCATAA         TTTTTAATAAGTGGC 100 37
LQF52_RS20680 4574424 .. 4574465 - -16.1  -3.31428   AGCATAAAATACAGA TCAAAAAAAACCCTTCACG ATTA CGTGAAGGGTTTTATTTGG  CAGGGGCGGAGAGAC 100 23
LQF52_RS20675 4573074 .. 4573089 -  -4.7  -3.87737   TATAAATATCAATAA              CCAAG GTCTTT CTTGG               TTTCATATTCCTGTT  59 3
LQF52_RS20670 NONE
LQF52_RS20665 NONE
        yjfF 4568997 .. 4569033 -  -4.4  -3.17526   CGAGCAACCCAAAAT    GGAAGAATTGGCAAGC CAGCT GCTGGGCAATTTCTCC    CTTTCGCTGTTTGCA  49 389
LQF52_RS20650 NONE
LQF52_RS20645 4566806 .. 4566829 -  -5.4  -3.87994   AGGGATCCCCAGAAA          CATCATCA ATACACCA TGATGATG           TTTCGATAGGCTCTC  63 7
        ilvL 4564662 .. 4564684 - -11.3  -5.45652   ACGCCCAACAAAAAA          CCCCCG-ACC TTTC GGTGCGGGGG           TTTTCTTGAATTAGG 100 50
        ilvG NONE
        ilvM NONE
LQF52_RS20620 4561604 .. 4561634 -  -3.2   -3.4158   TCCAAAAATTACGAA       TTTGGCGATGAC GGAACGA GTCACCGCCTGA       CTGTCTGTCTTGATT  48 43
        ilvD NONE
        ilvA 4558125 .. 4558161 - -25.3  -3.46088   AGATGGCATTAAAGA    TAACGCCGCCGACGGCG AAA CACCATCGGCGGCGTTA    GGGGAACACTCAGCA 100 42
LQF52_RS20605 4557293 .. 4557303 -  -4.6  -4.38712   TGGAGCGCGATAAAA                 CCCC ACA GGAG                 CCGCAGAAAACGCCG  66 62
        ilvC 4553937 .. 4553962 - -20.5  -5.60993   CGTTTGATAAAAAAA         GAGGGCGCAGC CAAT GCTGCGCCCTC          TTCTATTTCGATCAC 100 50
        putA 4548227 .. 4548253 - -10.1   -5.0916   CCCCGAACATAAAAA        GCGCGCC-GACC TTCT GGTTTGGCGCGC         TTTTTCTACTATACC  93 48
         rep 4545708 .. 4545725 -  -8.4  -3.57731   TTAACGAGCATATAA             GGGGGA GGATTA TCCCCC              TTTTGCTTTCGCCAA  72 17
        trxA 4542241 .. 4542251 -    -4  -3.78934   CGTCTTGTAGAACAA                 TTAC CTT GTAA                 AACAACGATTTTTTC  55 233
         rho 4540648 .. 4540667 - -10.7    -5.626   TAGGGGATAAAAAAA            CGCCACG ACCCAG CGTGGCG             TTCCCCGAGTTATCC 100 62
        wecA NONE
        wzzE 4538314 .. 4538337 -  -5.2  -2.84634   TCGCAGAGCATCAGA          CGCGAATCAG CAAG CTGGTTAGCG           CGGACGGCGAGCCAA  50 20
        wecB 4537140 .. 4537152 -  -7.7  -4.11692   TAGCGACGTTTAAAA                TCGCT CCT AGCGA                TTTTTTAAAGCATCA  74 19
        wecC NONE
        rffG NONE
        wecD NONE
        rffA NONE
        wzxE NONE
LQF52_RS20505 NONE
        wzyE NONE
        rffM 4528293 .. 4528317 -  -8.5  -3.15427   AAGATTGTGGAGCAA          GGTTGGCGCGT TTA ACGCGCCAATT          CAATGACGCTACAGG  67 34
LQF52_RS20490 NONE
LQF52_RS20485 NONE
LQF52_RS20480 NONE
LQF52_RS20475 NONE
LQF52_RS20470 4525931 .. 4525948 -  -9.9  -5.90981   GCAGACGAAAAAAAA             GCACATC TTTC GATGTGC              TTTTCTTTGTAATTG 100 39
        purB NONE
LQF52_RS20455 NONE
LQF52_RS20450 4521515 .. 4521547 -  -7.8  -3.25223   GAGTCATACCATTAA     TGCTTCCACCGGC-CA TAC TGCGCCGGTGGA-GAA     GGTGATAAGTCAACC  64 58
LQF52_RS20445 NONE
LQF52_RS20440 NONE
LQF52_RS20435 4518776 .. 4518803 - -18.6  -5.71638   TAATAAGCAAAAAAA        TATCCGCGTCGA GGAA TCGACGCGGATA         TTATGACTTAACCGT 100 44
LQF52_RS20395 4509112 .. 4509134 - -13.5  -5.90981   TCAGACGAAAAAAAA           CGCTTACCG ATAAA CGGTAAGCG           TTGAAAATATCAGGT 100 486
LQF52_RS20370 4502067 .. 4502077 -  -3.2  -2.76315   TGAATACGCTGAAAG                 CCGA GTG TCAG                 AACGTTACAGAATCT  43 30
LQF52_RS20365 4500850 .. 4500872 -  -7.7  -2.60244   CTTTCAACGAATTCA           CGGCGCT CCACACATC AGCGCCG           TCCCAGAATTATCAA  59 17
LQF52_RS20355 NONE
        dapF NONE
LQF52_RS20345 NONE
        xerC NONE
        yigB 4496942 .. 4496955 -  -3.1  -4.03078   CGAGCAGATCAGAAA               CGT-CC ATA GGTACG               GGTTATCCGGTGGCG  57 97
        uvrD 4494730 .. 4494761 -    -6  -3.51406   GACGATAAAGACTAA      GACAGGGTTTTTATA AGT TATAT-AACCCCGTC      ATACTCCCAGTCGCA  60 50
LQF52_RS20325 4493604 .. 4493614 -  -6.8  -4.87665   TCGTAGCGACAAAAA                 CAGC GTC GCTG                 ACAACCACGAAGGCT  80 305
        corA 4492486 .. 4492525 - -10.8  -4.25681   ATTGAAGGGAAGAAA  CGCGATGCACCTGATGG TTAATCT CCGTCAGGCGCATCG-G  TGAAAAATTAGAGCC  88 33
LQF52_RS20315 4490925 .. 4490947 -  -4.1  -3.65351   GTATGCTGATCGAAA          CGCT-GTGGC TGCT GCCAGTAGCG           GTCATTTATCTGTTT  53 351
        pldA 4488550 .. 4488567 -  -9.1  -3.66148   CAATGAAATCAAACA             GGCGCTA TTTT CAGCGCC              GTTGGGTAAAACTGC  75 112
        recQ 4486684 .. 4486700 -  -8.7  -3.08312   AATGCAGTCAGGCAA              GACGAGC ATC ACTCGTC              ATCATTATTATCGAC  66 17
        rhtC 4485969 .. 4486001 -   -15  -3.16055   GAAAGGCCTGATTAA     GGCAGTGCGCCG-TAG CGG CTAGCGGCGCAC-GCC     TATCTATCATTCAGA  95 49
        pldB 4484187 .. 4484199 -  -9.1  -2.75228   AAAATTAATGATAAC                GCGCA AAG TGCGC                CAGAATCAGCGCAAA  66 2
        yigL 4483136 .. 4483174 - -11.1  -3.71873   GGATTTAGAGGGAAA  CACGATGATGAGGC-TCCC GCA GGGATGCCTCG-CACCGTG  GTCGCCCTCGGTATC  85 124
        glpA 4478618 .. 4478634 -  -7.3  -3.56325   CGCCGATAATCACAA              CGTCATA GCG CATGACG              ATCCTCCTGACTGTC  65 11
        glpB NONE
        glpC 4475924 .. 4475941 -  -8.4  -5.81032   GAATTGCAAAAAAAA             GCCAGC ACCCGA GCTGGC              TAAATAATACTGGAA 100 244
LQF52_RS20245 4475052 .. 4475075 -   -11  -5.38958   AGTGACAAATAAAAA          GCCCGCGT CTTTTCCT ACGCGGGC           TTCTTCATTTTTCTC 100 49
        gntR 4473739 .. 4473753 -  -4.2  -2.76492   TTATCTATTTGAAAG               GCAGCT TTG AGCTGG               TTCTTGAGCGTCACA  45 214
LQF52_RS20230 4471855 .. 4471874 -   -15  -3.16936   AAATGTGACTAAAAG            CCCCCTCC GCAA GGAGGGGG             GTTAAACACATCAGA  95 36
         asd 4469384 .. 4469411 - -12.8  -3.40597   TCCGTCATCGAAATA        TGACGCAACACC AACC GATGTTGCGCCA         GAAAAGCAGGAAGAC  90 54
        glgB NONE
        glgX NONE
        glgC NONE
        glgA NONE
        glgP 4457721 .. 4457756 - -16.3  -3.57406   CTTTTAGTACAAACA    CAAAAGCGCCGTAGG TTTTTG CCTACGGCGCTTTTT     CATACCATCAACGCG 100 44
        glpE 4455499 .. 4455511 -  -4.9  -3.53531   TTAGGAACATGATAA                TAAAG GTT CTTTA                ATCGTCATGCGATCA  56 38
        glpG 4454613 .. 4454631 -  -4.5  -3.03243   ATTTATCCCCTAAGA            CGCCCCGA TTTA CCGGGG-G             TTTGTTTTATTATAC  49 16
LQF52_RS20170 NONE
        malP NONE
        malQ 4448783 .. 4448793 -  -4.6  -3.57462   CAGCTCACGCTGAAA                 GCGC CTA ACGC                 CAAAATGCGTAAAGT  52 382
        bioH 4446791 .. 4446804 -  -8.1  -4.57474   TCAACCCAGAGAAAA               CCCTG CGCA CAGGG                TGCCAAGTTACCTTA  82 99
        acrD 4443553 .. 4443595 - -18.6  -3.85817   ACCTCTCGGCATAAA GCCCGATGGAGCCATTTTCA TCA TGAACATGGCTCCATCATGC CTTCTACTTCGGCGG 100 29
LQF52_RS20125 4440686 .. 4440697 -    -3  -3.61232   TGTCTCAGATAAACA                TCAT ATCA ATGA                 ACCAGCAAGCCGATA  50 144
LQF52_RS20120 NONE
LQF52_RS20115 NONE
LQF52_RS20110 NONE
LQF52_RS20105 4436145 .. 4436169 - -12.9  -2.79641   AGAGAGTAAAATGCA          GCAGGGTGAAC GAT GTTCACCCTGT          TTTTTATGTCACCTT  85 112
LQF52_RS20080 4428963 .. 4429004 - -21.1  -2.84687   TGAAGTATGACGAGA TTCACCATCCTGCCTATGC AGAG ACATAGGCAGGATGGTGAC  AATAACATCAATCTT 100 33
LQF52_RS20065 NONE
LQF52_RS20060 NONE
        greB 4422627 .. 4422648 - -15.1  -2.63901   ACGTCAGCAATGAAT           CCGCCCGGC ATAA GCCGGGCGA            CGTTCACTTAACGTA  89 29
LQF52_RS20045 4419504 .. 4419540 -  -8.7  -4.68994   ATGAGGAGTGAAAAA    GATGCTCCCGTTTTTCA GCC TGTAAGGCAGGAGCATC    GCCATACATCACGGC  89 34
LQF52_RS20040 4417203 .. 4417235 -  -3.4   -3.5525   AGACACTGCGGCAAA      GCTAAACAGGTTGC TCATC GCTACCTCCTTAAC      GTTCGGTTCCTGAAA  50 52
LQF52_RS20035 NONE
LQF52_RS20030 NONE
LQF52_RS20025 NONE
LQF52_RS20020 NONE
LQF52_RS20015 NONE
LQF52_RS20010 4410348 .. 4410361 -  -5.2  -3.53012   TTCTCTTTCTCCAAA               GGCG TAATAG CGCC                GACGCTGCTATTGTT  56 331
        ompR NONE
        envZ 4408184 .. 4408208 - -20.1  -3.17075   TTTGTCGTAATCGAA          GAAAGGCGCGG ATT CCGCGCCTTTC          CTTTATTCATATCTG 100 73
        nudE 4400662 .. 4400698 - -19.6  -6.20267   TGAAAAACAAAAAAA    CCCGCCGTGAATAGCA GGTTT TGCTATCCACGGCAGG    TTCGCCTTCATTTAT 100 159
LQF52_RS19965 4399076 .. 4399097 - -14.5  -3.15861   CACCACGTTCATTAA           TGGCCTTCC TGAC GGAAGGCCA            TTTTTTATTGAAAAC  95 104
        pilM NONE
LQF52_RS19950 NONE
LQF52_RS19945 NONE
LQF52_RS19940 4393943 .. 4393956 -  -3.1  -3.14564   CTACGCTGTTATCAA               CATTG TTTT CAACG                AACGGTTGTCCAAAA  46 78
        hofQ 4392422 .. 4392432 -  -3.2  -3.42494   GCAACCGAATAAAAT                 GTCA CAC CGAC                 CACAGGTGGTCAATG  50 212
        aroK NONE
        aroB NONE
LQF52_RS19920 NONE
         dam 4388512 .. 4388522 -  -6.8  -3.59979   TCTGTTTACCCCAAA                 CGGT ATT ACCG                 ATATAGGGCTAATAA  64 20
         rpe NONE
LQF52_RS19905 NONE
        trpS 4385994 .. 4386018 - -16.5  -3.80841   AGTAGTAGCAGTAAA          CCGTCAGGAGA GAG CCTCCTGACGG          TAATTGAGAGTTACG 100 36
LQF52_RS19855 NONE
LQF52_RS19850 4372839 .. 4372850 -  -3.6  -2.99871   GGCGACAGCAAACCA                CCAC TCAC GCGG                 TTATCTCTTTTTAAC  45 104
LQF52_RS19845 NONE
LQF52_RS19840 NONE
LQF52_RS19835 NONE
LQF52_RS19830 4369098 .. 4369115 - -12.7  -5.71983   TGAACGATAAAAAAA             GGGCCGA TTGC TCGGCCC              TCATGATGATTATCG 100 66
        ppiA 4368313 .. 4368344 - -17.4  -3.09671   ACGTTAACGTTAAGA      TCGACAAAGGCCAC ATCA GTGGCCTTTGTCGT       ATTCTCGGTTCTTTG 100 46
LQF52_RS19800 4359699 .. 4359712 -  -5.3  -4.10657   GGATATGGTGGAAAA               TCTGA TTAT TCAGA                TTTCTCCAATTTAAA  65 346
LQF52_RS19775 NONE
LQF52_RS19770 4353749 .. 4353770 - -12.3   -5.5112   CCTACCAATAAAAAA           GCGTGAAGC CTCA GCCTCACGC            TTTTTTTTATGGCGA 100 132
LQF52_RS19760 4352271 .. 4352293 - -11.2   -3.8579   ATCGAATAAGCGAAA           CGGGCACGGC AGC GTCGTGCCCA           GAGAAAGAGATTAAG  91 36
LQF52_RS19740 4349258 .. 4349281 - -16.8  -2.64155   GTGTCCTGAAAGGTA          TAGCGAGCGG AAAA CCGCTCGCTA           CTTCATCTGAGCCAA 100 48
        kefG NONE
        kefB 4344634 .. 4344647 -  -2.4  -3.52113   TTCTAAAACCTAGAA               CCTA TCCCGG TAGG                CGTTATTGGCGCAGC  47 212
LQF52_RS19720 4344363 .. 4344377 -  -4.2  -5.26875   TCTGGAATCAAAAAA               CGTCAA CGG TTGGCG               ACAATGCCACCATGA  79 51
        slyD 4343648 .. 4343674 -  -8.9  -5.76633   CCAGATATAAAAAAA        CCTCAGGTT-AT CTTC ATCAACCTGAGG         TTTTTTTTATGCGCT 100 49
        fkpA 4342237 .. 4342256 -   -15  -6.23545   GTGAAACAAAAAAAA            CCGCAGGC CAGT GCCTGCGG             TCATATTGCGACTAT 100 49
LQF52_RS19695 NONE
LQF52_RS19690 4337926 .. 4337937 -  -5.8  -4.59109   GAGATGCTGCAAAAA                CGTC AGCA GACG                 CTGAAATGGATATTG  75 517
LQF52_RS19670 NONE
        tusD NONE
        tusC 4333249 .. 4333259 -  -2.4  -3.97947   CGTATGCAGCATAAA                 GGGG AAA CCCG                 TCGCTAGAATGAAAG  53 29
        tusB 4332952 .. 4332968 -    -3  -3.67364   GAAATATACAAAAAT             TCGGCGT TACC ACGC-GA              GTTGCTGCGGGTGCT  50 15
        rpsL NONE
        rpsG 4331827 .. 4331862 -  -3.3  -3.09933   GTTCAATTTAGTTAA   CCCAAGCGGGTTGGCTA TTTT TAGCG--CCCGCTTGGT    TAGCATGACTACAGC  45 48
        fusA 4329625 .. 4329648 - -13.2   -3.6502   TATTCCTTACTCAAA          TGCTCTCCCC CTAT GGAGAGAGCA           CGGGATTTTGTTTTA 100 51
         tuf 4328379 .. 4328392 -  -8.1  -5.48825   TAGGACGTAAAAAAA               GGCAC CGAA GTGCC                TTTTTCATGCATTAC 100 53
         bfd NONE
         bfr 4327260 .. 4327274 -  -5.6  -3.54653   ATCGTCAGCACATAA               CCCCCA TAT CGGGAG               TATTGTTTTGGTCAA  57 226
        rpsJ 4326854 .. 4326868 -  -3.5  -2.72379   TCAATCGCTCAATGA               CCTGA TTAAC CCAGG               CTGATCTGCACGTCT  43 16
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 4322164 .. 4322189 - -12.7    -5.252   TATGGGTAGAAAAAA         TAAACGGCCCT TTGC AGAGCCGTTTA          TCATAAGAGAAGAGC 100 50
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR 4319154 .. 4319164 -  -3.2  -3.32963   ACCTCTACCTTAGAA                 CTGA AGG CCAG                 CTTCACGGGCAGCAT  48 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 4316462 .. 4316491 - -14.5  -4.61868   CAGCTACATACAAAA       GATTG-GCTGGCTA ATC TAGCCAGCTCAATC       CAACTTTGCAAGAAA 100 55
        rpsM NONE
        rpsK 4315606 .. 4315622 -  -7.9  -4.24123   CCAACAATCCTAAAA              GCGGCGT TAT ACGCGGC              GCTTTTTCGGCGGAC  76 15
        rpsD 4314958 .. 4314976 - -10.4  -3.14132   TCTCTTTGGTACTAA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGGTGT  74 10
        rpoA NONE
        rplQ 4313471 .. 4313500 - -16.7  -2.89881   GATTTATTTCAGATA       TAAAAAAACCGGG TTTC CCCGGTTTTTTTA        CGCTCTTACAGATTA 100 38
LQF52_RS19475 4312970 .. 4312986 -  -2.2  -3.45571   CGTCGGAAACAGGAA              GATACG CCTGC CGCACC              GCCAAAACCTAGCGC  45 129
        dprA NONE
LQF52_RS19440 NONE
LQF52_RS19435 NONE
        tsaC NONE
        aroE NONE
LQF52_RS19420 4304315 .. 4304329 -  -2.8  -3.55761   GATTTACTCGGCAAA               CAACTA TGT TCGTTG               GAAAGATGAATATCT  49 44
LQF52_RS19410 4301653 .. 4301663 -  -3.2   -4.8048   TGGGGACACGAAAAA                 TCCG TAC CGAA                 TTAAAAATCCGGCAC  69 147
LQF52_RS19405 4301499 .. 4301536 -  -6.5  -3.45839   ATTGTTAAAGAGCAA   TATCGTAAACATGACTC CGAA GAATCATCTTTAAGATA    TTCATGATAATGTCT  60 58
LQF52_RS19400 4298412 .. 4298422 -  -6.8  -4.34402   TTCGTCACACCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 4298143 .. 4298164 - -15.9  -4.81551   CAGCCATAGCAAAAA           GCCCCTGTC TTTC GACAGGGGC            TTTCCACGTAGTTGA 100 42
        metA 4296969 .. 4296986 -  -9.1  -5.27709   GCAGAAAAAAAGAAA             GGCACCC TTAA AGGTGCC              TCAGAGAAAAGAATT 100 49
        aceB NONE
        aceA 4293758 .. 4293782 -   -15  -2.85668   GATCTCCAGATGAGA          CCCGGCCAGC CAAAC GCTGACCGGG          CAGGATCAGAACTGC  89 31
        aceK 4291876 .. 4291886 -  -6.8  -4.56775   AGTGCTGTTCAAAAA                 CGTC TCT GACG                 TTTTTGTCCGACGTG  77 103
        metH 4286668 .. 4286698 - -16.9  -3.54741   CAGGACGTCGCGAAA       GCCAGTGCCGCGT AGGGA ACGCGTCACTGGC       GGCTCGATAAGCGTT 100 237
LQF52_RS19360 4285450 .. 4285462 -  -4.7  -2.79796   CGTTAGCTGACCATA                CGCGC ATC GCTCG                GCGCCATACCGTAAC  47 0
LQF52_RS19355 4283086 .. 4283101 - -11.8  -4.63527   TCATGATGTGAAAAA              GCCGGG GAAA CCCGGC               TTTCGTTTTATTGCT 100 54
LQF52_RS19345 4279586 .. 4279598 -  -9.1  -2.71712   GCGGGTGGTGCAAAC                GCTGC ACC GCAGC                CTGTTCGAGTAAGCA  66 80
         pgi 4276061 .. 4276072 -  -7.2  -4.33653   GATTGAAAAACCAAA                GGGC ACAG GCCC                 GATTAGTTACGCCAC  77 28
LQF52_RS19330 4275638 .. 4275671 - -11.7    -4.015   TGAGTGAGTAAATAA     TGCGGTGAGAGCGGA TTGC TCCACTCTCACCGGG      TTTTTCTTTAGCTTA  93 38
         efp 4273925 .. 4273947 -   -17  -4.97312   AAAACGAATTAAAAA           GGCCGCCCTC ACA GAAGGCGGCC           TTTTTCGCATTAATT 100 39
LQF52_RS19315 4273523 .. 4273541 -  -8.2  -4.45544   CGGCAGTAATGAAAA             GAGGCAAT ATA ATTACCTC             TCCGAGTGATCCACT  82 130
LQF52_RS19310 4272712 .. 4272723 -  -2.2  -4.10161   GACGATGTGGGAAAA                CGTGC ATT GC-CG                CGCTGGTGGCACTCT  56 418
        epmA 4267644 .. 4267662 - -10.2  -4.62069   CGCGCAGTGGAAAAA             CGCTGACG CCA CGGCAGCG             GACGCCGGGCAGTTT  91 96
         orn 4261306 .. 4261318 -  -5.5  -2.61144   TTATGGCGTAAATAG                CAGCA GAT CGCTG                GACATCACGCCCTGC  50 58
LQF52_RS19255 4261001 .. 4261015 -  -5.6  -3.35197   TCGGACAGACACTAA               CAGGCG TTG CGTCTG               ATTACTGCACACTGC  56 69
LQF52_RS19250 4260500 .. 4260527 -    -5   -3.6579   AATTCATGCTAATAA        TCCG-TTAGTTAC TAA ATAACCAATCGGA        ATCACCATGAAATTT  57 405
LQF52_RS19245 4259854 .. 4259885 - -16.8  -3.85817   ACCCTGTTGTATAAA      CGTAAATTGCAGAC AACC GCCTGCAATTTACG       ATAGAAAATAAAAAT 100 44
LQF52_RS19235 NONE
LQF52_RS19230 4256835 .. 4256852 -  -4.8  -3.34013   TATTGCCCGAATCAA             CGGCTG TGGCTT CAGCCA              GCATGAATTACCAGA  51 300
LQF52_RS19220 NONE
LQF52_RS19215 4254042 .. 4254053 -  -4.4  -3.89614   CTTAAGGCTGATAAA                TCAG GCTG CTGA                 CATCTACCGGCTGCC  59 0
LQF52_RS19210 NONE
LQF52_RS19205 4252330 .. 4252346 - -12.3  -4.71426   GGCGTATTAAGAAAA              GAACGCG TAT CGCGTTC              GCTGGGTGAAGAGTG 100 112
LQF52_RS19190 NONE
LQF52_RS19185 4248194 .. 4248227 - -20.4  -2.85378   AATCATATCATGACA     GCCCCACAGCACGG GGAAAT CCGTGCTGTGGGAC      CTAGGCCAATCAGGC 100 35
LQF52_RS19180 4247492 .. 4247505 -  -3.1  -2.66316   CTTGCCATCACATCA               CTCCA TCCG TGGAA                CGTCACCCTCTGCGG  42 9
LQF52_RS19175 NONE
LQF52_RS19170 4243599 .. 4243623 -  -9.3  -3.02144   GCATGTTCCTTAATA          GGGTGAAGC ACTTTCG GCCTCACCC          TAATTATTGTCGTCA  68 53
LQF52_RS19165 4242590 .. 4242631 -  -3.9  -3.59627   ATGAAATCTTTTAAA TGAGCGAATTAAAATTATT ATTA AATATAATTAATTCACTCA  TTGATAATTTACTAA  53 49
LQF52_RS19160 4240904 .. 4240932 - -15.3   -3.6579   AACCCACCTCAACAA        CCAGACCGCCTGA GGT TAAGGCGGCCTGG        TATTTCATTGGCTTA 100 47
LQF52_RS19155 4239516 .. 4239526 -  -5.4  -2.70298   GTTCTTAATTATAAT                 TGGT TAT ACCA                 GTTACTGTCCCAGTT  50 8
LQF52_RS19150 4238661 .. 4238672 -  -2.2  -3.01712   CTGGCGCCCCTAATA                CCCA CTTT TGAG                 TCAAAAAATAGAAAC  42 478
LQF52_RS19140 4235273 .. 4235306 -  -6.7   -2.6574   TAATTACTGACATCA     CTTTATCCTCATGTG TTTT CGCATGTGGCTAAAG      TACAGAAATGTGACC  55 84
        ahpC 4234642 .. 4234660 - -14.6  -4.82901   GCCGGGCCAGAAAAA             TCGGGTGC AAC GCACCCGA             CAAAAAAGGCCATGT 100 72
        ahpF 4232894 .. 4232926 -   -17   -5.1166   GATCAAAAGCAAAAA      CGCGGCGACACCTC TTGAT GAGGAATCGCCGCG      CGGAACGTTAATATC 100 100
         nnr NONE
        tsaE NONE
        amiB NONE
        mutL NONE
        miaA 4224380 .. 4224393 -  -4.5  -4.15044   GTTGTTTGTAACAAA               GAACC CTAC GGCTC                TAAAATAACGGTGTA  61 88
         hfq 4223977 .. 4224027 - -11.9    -5.243   CAAACGAGCAAAAAA CACCACAGCG-AAG-GAGCCGAGCG ATG CGTCCAGCTCTCCCGCGCCGTGGTG AATTGACAATACGCC 100 41
        hflX NONE
        hflK NONE
        hflC 4220270 .. 4220290 -  -7.5  -5.82388   AAATGGCAAAAAAAA            GCCCGGA GAAAGAA CCCGGGC            TTGATGAGACGTCAG 100 51
LQF52_RS19075 NONE
LQF52_RS19070 4218539 .. 4218555 - -13.7  -4.85129   AGTAGATAGCAAAAA              GGACGGG AAT CCCGTCC              TTTTTCATATTCGCA 100 63
         fbp 4215850 .. 4215881 -   -13  -3.95836   AGCTTTAAAAGACAA      TCCCGTGTAGCCGA GGAT CCGACAACACGGGA       CTATATTGATGACTA 100 68
LQF52_RS19020 4209647 .. 4209664 -  -4.9   -3.1505   ACGAGCCGTGATGAA             TCATGTC GTCA GACATAA              CGAACCTCTTCTTTT  52 16
        speA 4207639 .. 4207658 -  -3.5  -5.07567   CGATAGCCGAAAAAA            GGGATGC TCACTC GCATCCT             TTTTTACTCGCTCAG  74 47
         tkt 4203192 .. 4203213 - -13.7  -5.66989   TAAAGATGAAAAAAA           GCCGCCAGC GCTA GCTGACGGC            TTCCCATATCGAGAT 100 54
         epd 4201886 .. 4201900 -  -7.8  -2.91264   TGCTTGAGCGAGATA               GCGACC CCA GATCGC               CACCGTCGTACTAGA  61 36
         pgk 4200580 .. 4200594 -  -4.3   -4.0371   GAGGGGTTAGAGAAA               TCGAT GTTAA ATCGA               CAGGTTGTCTCGACA  61 106
        fbaA 4199411 .. 4199432 - -13.1   -3.3543   CAAGGCCCCAAAAAT           TAAGGCTCC CGTA GGAGCCTTA            GCATCAAATCATGTT  95 54
        mscS 4198418 .. 4198442 -  -6.4  -4.07568   GCCTGCCTGGTAAAA         CATGCCAGCGC GTTT GCTCTGGC-TG          TTTCGCTTCGGCGCT  68 60
        argO 4197485 .. 4197511 -  -5.8  -3.13403   CTGTCTGCACCAACA         CGGACTCTTCCA GAA TGAAAGAGACAG         GACGGATCGCTTTAC  54 127
LQF52_RS18970 4196603 .. 4196624 - -11.6  -4.18213   AAGTATAAAGAAGAA           CAGGCCTG TCTGAG CAGGCCTG            TTGGTATCATCAAGG  93 70
        rpiA 4194757 .. 4194787 -  -7.6  -5.08824   TTTTTAGCTAAAAAA       TTTCTGACGTGG GTGTTCA CCACGCCAGAAC       GATCATGAACTCATC  86 36
        serA 4193208 .. 4193229 -   -13   -2.6563   CGCTGTAATAACGCA           GCCAGCCC AATTTG GGGCTGGC            TGTTTATTCACTGAT  84 67
LQF52_RS18945 NONE
LQF52_RS18940 4189160 .. 4189178 -   -16  -4.56969   AACGTGATAAACAAA             TGGCCCGC ATT GCGGGCCA             TTTTTCTTTCCAATA 100 58
        sltY 4184909 .. 4184942 -    -6  -2.62389   TAACGGAGTCATAAC     GGGCTGCCATACTA TTTAAC TAGTACGGCAGCAT      AACACAATTCCAGTC  53 61
        trpR 4184551 .. 4184561 -    -4  -3.79993   TCAGACAGCAAAACA                 GTAA TCG TTAC                 GCGTCGTCACTCAAC  55 22
        gpmB 4183258 .. 4183282 -  -4.3  -3.60502   ATACAGATGGGGAAA          TACCCGCAA TCATCCG CTGCGAGTA          TTTGATCCCCATCCA  52 57
        creA 4181548 .. 4181572 -  -6.4  -3.18634   CTGAAGAAAATGACA         GGCCGTG-AGC TTAA GCCACACGACC          GTACCGTTGACGTCA  54 203
LQF52_RS18895 4179215 .. 4179236 -   -13  -6.22802   TGCCATAAAAAAAAA           GCCCGCAC TGTTCG GTGCGGGC            TTTTTCTGGAATCTT 100 329
        thrA NONE
        thrB NONE
        thrC 4174063 .. 4174079 -  -7.9  -4.21194   TTTCATTATTCAAAA              CCGCCTG ACG CAGCCGG              AGCAGTTGAAAGCGT  74 376
         tal 4172094 .. 4172112 - -14.6  -5.71712   TCGCAGACAAAAAAA             TAGCCGGG CAT CCCGGCTA             TTTTCATCAACAAAA 100 44
         mog 4169973 .. 4169985 -  -5.5  -2.91429   CAAAATTTTTATACA                CCAGC AAA GCTGA                ATCTTATATTTCAAA  51 51
LQF52_RS18855 4168482 .. 4168502 - -15.5  -2.74563   TTTACATGCTAACGA            GCCCTGTCA GAT TGACAGGGC            TCGTTTGTTTTTGAT  93 69
        dnaK 4165382 .. 4165421 -  -5.7  -3.01712   TCCTGCCCCTCAACA TGCGTGCACGGGCGCAGAG TTTC CTCGACGCCCGTGCT-G-A  TTGCCAGCAGTAGCC  52 73
        dnaJ 4164175 .. 4164195 - -11.8  -5.60993   TCCGTCATAAAAAAA            CCGGCGGG TTTAC CCCACCGG            TTTCTTATCACGCGT 100 54
        nhaA 4162742 .. 4162760 -  -3.8  -2.62184   GCCTCCGGCATAGCA             TCAACCCT TAC ACGGCTGA             ACCGCCTTGTCCAGC  44 7
        nhaR 4161790 .. 4161803 -  -9.5   -5.4505   GTTGCTAAGAAAAAA               CCGGC CTAG GCCGG                TTTTTTTGTGTCTGC 100 17
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB NONE
        ispH 4155331 .. 4155354 - -14.6  -4.09243   GAGAGGGGGGTAAAA          GCGGTAAGGC CAAA GCCCTACCGC           AGAAACAGCATTAAT 100 36
        dapB 4154141 .. 4154170 -  -4.3  -5.36364   CCAAAAAGATAAAAA       TAAAGGTGAACGT AAAA ACACCCACCTTTT        TCAGTTAGATAAACT  84 61
        carA NONE
        carB 4149312 .. 4149335 - -14.6  -5.26875   TTCCGAATTAAAAAA          GCCAGCGCTG TTAC CAACGCTGGC           TTTTATTATCCGCTT 100 63
LQF52_RS18780 4148456 .. 4148470 -  -8.6   -3.7282   TCAGGTGAGTAATAA               GCAGAA GGC TTCTGC               TTGCCTGAATGCATC  75 77
LQF52_RS18775 4148003 .. 4148030 - -10.6  -3.21099   TGGGTGCATGATGAA        CACCTTCCCAAT TTCC ACCGGGAAGGCG         TGTTTGCACTTATTC  78 51
LQF52_RS18765 NONE
LQF52_RS18760 4145882 .. 4145894 -  -3.4  -3.73873   CGAAACGTAATATAA                GAGT TTTAT ACTC                CCGGCCGTTTACGGT  53 18
        folA 4145249 .. 4145264 -  -7.5  -5.42514   CCAGAAACGAAAAAA              CCCGC AACAAA GCGGG               TTAGCTATTCATCGA  95 67
LQF52_RS18745 4143595 .. 4143606 -  -3.6   -3.1875   GACATCTCAATTGAA                CGAC GAAA GCCG                 CTACTCATTTTCATA  46 103
LQF52_RS18740 4142934 .. 4142944 -  -6.8  -2.93585   TGATATGCCAAACCA                 CTGG AGC CCAG                 AACTCAGCGGCCTGG  53 428
        djlA 4135179 .. 4135193 -    -7  -3.60296   CATCCCGATGCCAAA               GCGCTG GCC CCGCGC               CTGTTACTGCATGCA  60 193
LQF52_RS18680 4125851 .. 4125878 - -10.5  -2.74144   GTTTTACTGCTAAAT        GGCTTGGCCGGG TCTTT CCCGGCCT-GCC        CAACCTTAACCGTTT  71 31
LQF52_RS18665 4121536 .. 4121558 -  -7.7  -2.62616   TCAGGCGCTACAGGA          TGGCAG-CGC CGAG GCGGCCGCCA           TTCTGGGAATTTCAC  54 62
LQF52_RS18640 4116133 .. 4116154 - -12.3  -5.70829   AACACCATAAAAAAA           GCCAGCGAA AAAA CTCGCTGGC            TGGTGAAACGTCACC 100 70
LQF52_RS18625 4112854 .. 4112874 - -10.4  -5.51165   AAAACTGCAAAAAAA            GCCAGCGA AAAAG CCGCTGGC            TATTGATGGTACATT 100 79
LQF52_RS18620 NONE
LQF52_RS18615 NONE
LQF52_RS18610 4110672 .. 4110693 - -11.5  -3.64103   TACGGATATCCCAAA           GCCCGCATG ATTT CCTGCGGGC            TTTTTCTTTTTGAAG  87 52
LQF52_RS18585 4103387 .. 4103397 -  -8.2  -3.85698   TCTTTTGTTCAGAAA                 GCGG AAT CCGC                 TTCTGTATTGACCGG  71 351
        ilvI NONE
        ilvN 4101099 .. 4101120 - -14.5  -5.33026   TAAGGGAAATAAAAA           GGCCCGATA CTAT TATCGGGCC            TCTTAAAAGAAAAAG 100 55
         cra 4099840 .. 4099861 - -14.5  -2.57274   CTGGATAAGGAAGAG           GCGCCATAG CAAT CTATGGCGC            AAAAAGCAGGTAGAG  87 42
        mraZ NONE
        rsmH NONE
        ftsL NONE
LQF52_RS18545 NONE
        murE 4093516 .. 4093529 -  -3.7  -2.77235   CGAATCATGCAATCA               CCCCC AGCA GGCGG                GCAACGGTGATGCGA  45 1
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG 4087287 .. 4087321 -    -7  -3.01712   CTTCGTTGGCCAACA     CTTCGGCGATACCACC CAT GCCAGCACCGCCGATG     CCGACAAAGTGTATG  58 165
LQF52_RS18505 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ 4081577 .. 4081600 - -11.8  -2.55015   ATGTTACTGAACCTA          CGAACCTAGT ATAA ACCAGGTTCG           GTGGCACAGTTTAGC  79 78
        lpxC 4080556 .. 4080599 -  -8.3  -3.55265   AGAAAGATATTAGAA CGACTGGCCTCATTGGC CGGAGAGAGT ACCAATAAAACCAGTCG TAATAAGAAATGATT  71 57
        secM 4079486 .. 4079498 -  -7.7  -4.76312   CACAACATCGAAAAA                CTGAG AAA CTCAG                CAAAAAACGAGAGAA  86 70
        secA 4076670 .. 4076686 - -13.7  -4.45544   TCTTATCAAGTAAAA              GGCGGTC AAT GACCGCC              CTTGTACTTATCACA 100 67
        mutT 4076164 .. 4076191 - -10.6  -2.66869   ATAGTGAAGAATGGA        GCGAAACGCG CTAACGGC CGCGTTCCGC         TACTATAGTTTGAAG  74 76
LQF52_RS18445 4072847 .. 4072858 -  -3.6  -3.97444   ATTCAACAAATACAA                GCGC AACT GCAC                 CAGGGCACGTCGCTA  58 386
        ampD NONE
        ampE 4065865 .. 4065898 -  -8.1  -2.62983   GGGATCGTGACAGTA     TGCCCGTGTTCG-GCG AAC CGCCCGCAGACAGGCA     ATAAGCGAGAAACAG  59 66
        pdhR 4060483 .. 4060496 -  -2.3  -3.24146   CGTCCTAAGCAAAAC               GCATG AAGA CAGGC                TCATCGTCGTCATTA  44 70
        aceE NONE
        aceF 4055804 .. 4055821 - -14.1  -5.31275   GCTTATCAGAAAAAA             GCCGGCC GTCA GGCCGGC              TTTTCGATTACATCA 100 33
        lpdA 4054135 .. 4054158 - -16.8  -5.76949   GATGCGTAAAAAAAA          TCCGGCACCT ATAA AGGTGCCGGA           TTGAATTCACGCTAG 100 57
LQF52_RS18360 4051878 .. 4051892 -  -6.4  -3.28712   TTTCCTGCCGCATAA               GCCGAT GTC ATCAGC               CCATCCTGCCCACCG  59 306
LQF52_RS18355 4050036 .. 4050061 - -11.9  -3.91352   ATACGTTGAACGAAA         GTCGGCACGAT CGCC ATCGTGCCGAT          AAAACGTTATTTCGG  93 32
LQF52_RS18350 4048975 .. 4049007 - -11.5  -3.44206   TAAGATTCATCATAA      CCTCAAAAACAAAAC GTC GTTTCTTTTTTGAGG      TTTGATTGTAATTGA  85 214
LQF52_RS18345 4047508 .. 4047535 -  -9.8   -5.0925   CTGTAAAATTAAAAA        GCCCCTGAATGC CGCG GCACGCAGAGGC         TAGCAATGCATCAGT  93 281
LQF52_RS18340 4045688 .. 4045699 -  -3.6  -4.30576   TTTCCACGACTAAAA                CCGC AATA ACGG                 TTCTCTGCTGCAGGC  62 96
LQF52_RS18325 4040472 .. 4040493 - -13.7  -5.06816   ATCCCGCAATAAAAA           CGCCACAGG ATTT CCCGTGGCG            TTCGCGATTAAGTAT 100 55
LQF52_RS18315 4038373 .. 4038407 - -13.6  -4.05402   TGGCAACGAAAAACA     CACGACCCAATCGACA ACT CGCCGATTGGGCCGTC     ATTTTTAGTACAAAG 100 75
        acnB 4034718 .. 4034734 -  -9.4  -5.60993   TGGCGCATAAAAAAA              GGAGGC ACAAG GCCTCC              TTCAATGTTGGGATG 100 55
        yacL 4034198 .. 4034220 - -11.4  -5.14563   GCGGTGACCAAAAAA           CGATCGTGTT ACC AACACGATCA           ATGCAGGACAAAATC 100 23
LQF52_RS18275 4029766 .. 4029778 -  -4.7  -4.47707   GGCGATTAAAAACAA                GCCGG AAT CCGTC                AAAGACTACTTCTTC  68 127
LQF52_RS18235 NONE
LQF52_RS18230 4019693 .. 4019712 - -13.6  -4.03078   GCAGGATACCAGAAA            CCTTCCCG AACG CGGGAAGG             AAGATATCCTGCAAT 100 93
LQF52_RS18225 4018664 .. 4018678 - -11.4  -3.05463   ATTGGCTCCAGCCAA               CTGCGC TAC GCGCAG               TTCAGTGAAAACGAC  72 168
LQF52_RS18180 NONE
LQF52_RS18175 NONE
        ugpC NONE
LQF52_RS18165 NONE
LQF52_RS18160 NONE
LQF52_RS18155 4002140 .. 4002150 -  -2.4  -4.85545   AGGAAACCAATAAAA                 CAGC CCA GCGG                 CTTTATGATTGGGTG  72 149
LQF52_RS18145 4000779 .. 4000794 - -10.4  -4.45517   AAATCATCTATAAAA              CCCCGA AATT TCGGGG               TTTTTGCTTTTGGGA  89 127
        uvrA NONE
LQF52_RS18130 3996646 .. 3996665 - -13.6   -3.6806   AGATACTTATCGAAA            TGCGTCGC TGGC GCGACGCA             TTTCGTGGAGTTATT 100 36
LQF52_RS18125 3995154 .. 3995164 -  -3.2  -2.73364   TGTTTATCTTAACCA                 CGAC TAT ATCG                 CCCCCACGCATGGAA  43 8
LQF52_RS18120 3994722 .. 3994734 -  -2.7  -3.89881   ACCAACTCCCACAAA                TATGC AAA ACATA                CTTTCTTATCATTCT  54 41
LQF52_RS18115 NONE
LQF52_RS18110 3993320 .. 3993350 -  -7.4  -3.54741   CAGGACGCCGCGAAA       GTCAGCGTCGTGTC GGG AACGCGTCGCTGGC       GGCCCGACTGCGGAG  65 514
        vapB NONE
LQF52_RS18075 3988307 .. 3988332 -  -5.3   -3.6215   CCAACCTATGCGAAA         GCGGTC-GCTGC ATT GCTGCTGATCGC         GCTTTATTTCGCGCT  58 221
LQF52_RS18055 3984026 .. 3984055 -   -13  -2.57132   GCGTGGCGGGAGAAG       CGAGGTTATCGC CTGAAT GCGATAACCTCA        TTGAGTGATTAGCCC  84 34
LQF52_RS18050 3982232 .. 3982254 - -12.1  -2.70932   CTTTTCTGGCAATCA           TACCGACTC TTAAC GAGTCGGTA           TGATTGTCTGGCTTA  79 95
LQF52_RS18030 3978698 .. 3978719 -  -9.4  -5.14563   TTCTTGATCAAAAAA           GCCCCGAC GAAATG GTCGAGGC            TTTGCGAAAACCCAT  93 68
LQF52_RS18005 3974657 .. 3974672 - -10.4  -4.56597   CCGCTGGCGCAAAAA              GCGGTG CTCA CACCGC               AGGATTTTGCCGATG  95 423
        lysA 3972705 .. 3972717 -  -9.1  -3.75015   ATAATCCCGATTAAA                GCGCT TCC AGCGC                CAGCAGCTCGTCCAG  77 8
LQF52_RS17985 3970549 .. 3970559 -  -4.6  -4.25104   CCGCCCCCATGAAAA                 CGCC GAC GGCA                 CAGGCGCGGCTCGCG  66 520
LQF52_RS17970 NONE
LQF52_RS17965 NONE
LQF52_RS17960 3966120 .. 3966130 -  -5.4  -2.84602   GCTAGTTTACCAAAC                 TCAG CGC CTGA                 TCCAGTACTTTTGCG  51 1
LQF52_RS17955 NONE
LQF52_RS17950 3964520 .. 3964537 - -11.3  -6.11644   TCAGGCAAAAAAAAA             CCTACGC ATCC GCGTAGG              TTGGTGTAATCAAAT 100 216
         aas NONE
        lplT NONE
LQF52_RS17935 3959979 .. 3960017 - -14.1  -3.58269   TAACCCACCGTCAAA   TAACAAAAAACCGGCCA TACGT TAGCCGGTTTTTTGTTT   AAGCCACAATCCCAA 100 432
LQF52_RS17885 3952049 .. 3952070 -  -8.7  -2.60512   TTGAAGATGAACGCA           CGCAGATAG AAGC CTCTCTGCG            CTTTAACGCGGGACA  59 490
        nsrR NONE
         rnr 3945359 .. 3945405 - -11.5  -3.06708   TAATTTAGAGATAGA GGTTTTCCCCGCGCCCTCCCCT TCTC AGTGGAGGGCGC-GGGCTAACT AACCTTACTCAGCAG  79 30
        rlmB 3944527 .. 3944554 - -22.8  -2.76453   GCATAATCCCAACGA        CAGCGGGGTGCC TCAT GGCACCCCGCTG         CTATCAATCACCGTG 100 45
LQF52_RS17850 3942179 .. 3942204 - -13.4  -4.29738   GGACACGCAGTAAAA         CAATACCGGG CAGATC CCCGGTATTG          TCATGTCACGACAAA 100 41
LQF52_RS17840 3941266 .. 3941288 - -13.4  -2.55074   GCTAACCTCAACTCA           CGGGCGGC CCCCACT GCCGCCCG           TTATTTTCTCTCGGA  84 26
        yjfP 3936045 .. 3936061 -  -2.9  -4.39107   AACACAAGGAAGAAA              CACAGGA GTT TTCTGCG              TGGCGATATTTAAAC  60 54
        rpsF NONE
        priB NONE
        rpsR NONE
        rplI 3934395 .. 3934427 -   -15  -4.14392   TCCCAATCTCTAAAA      TGCAAAACGCTGGC ACAAG GCCAGCGTTTCACA      TGTTAACTAAAGTAT 100 62
LQF52_RS17795 3933828 .. 3933849 -  -3.7  -3.93583   GAAGGCAGGGATAAA           CCGCTCAGCA ATT TAC-GAGCAG           GTCAGGAAGTCAAAT  58 147
        fklB 3932207 .. 3932237 -   -17  -4.58663   ACCATTCCGTAAAAA       TAACAAAGGCGCTC AGT GAGCGCCTTTGTTT       TTGTCTGGAGATTAC 100 37
LQF52_RS17770 3928799 .. 3928817 - -13.1  -3.81146   TCCCCCAACGAACAA             GCGCCGC TTTTC GCGGCGC             TTTTTTATTTAGCTA 100 38
LQF52_RS17760 3927325 .. 3927344 -    -5   -4.4572   AACACGCGAAATAAA            GACTGACA GCGA TGTCATTC             TCAGGCTCCTGCTTC  71 64
        cysQ 3924067 .. 3924089 - -12.8  -3.65902   CGCACCTCAGCCAAA           GAGATGAACG ATC CGCTCATCTC           CGCACTGAAGGCCGC  86 353
LQF52_RS17740 3923255 .. 3923271 - -15.1  -3.65986   TAGCAGAAACCAGAA              CGGCCCG CTA CGGGCCG              TTTCTTTATCACTCA 100 38
LQF52_RS17725 NONE
LQF52_RS17720 NONE
LQF52_RS17715 3914200 .. 3914216 -  -9.4  -4.77036   TCGCATGATCAAAAA              CACCGC CTTGC GCGGTG              TTTTTATTTATGGCG  91 67
LQF52_RS17705 3911740 .. 3911757 -  -9.9  -5.54192   AGTAAGGCAAAAAAA             TTCCCGT TTTC ACGGGAA              TTTTTTTATGAAGTA 100 44
        folB 3910513 .. 3910537 -  -9.3  -5.26316   GCAGCGCACAAAAAA         GCGGCT-GCG TACTTC CGCGAGCCGC          TATAACTGGCTTATA 100 100
        bacA 3909583 .. 3909606 - -18.2  -4.41616   ACGTCCTGAAACAAA          GAGGCCACGC TAAT GCGTGGCCTC           TTCTCTATAAAAGTC 100 65
LQF52_RS17675 NONE
        glnE 3903088 .. 3903101 -  -4.5  -2.71744   GACCATTAGATAGGA               GGAAC TTAC GCTCC                CACTAACCACTTATT  47 17
        hldE 3901496 .. 3901520 -  -7.2  -3.14344   TAGCTTGCGGACTAA         CGGCG-TCGAA ACCT TTCGAGCACCG          TCAGTTTTATTTCGT  62 41
        ligA NONE
LQF52_RS17655 3899063 .. 3899083 - -15.5  -3.73107   CCAGTAAACGTGAAA            GGTCGCTTC AAT GAAGCGACC            TTTTTTCATCAAGGG 100 61
LQF52_RS17630 3892018 .. 3892046 - -13.9  -3.74077   GGGTATATAGCGAAA        CGCTGCGCCATCA TAC TGATGGAACAGCG        TTTTGTGTTATTGCC 100 72
LQF52_RS17625 NONE
        gudD NONE
        garL 3887635 .. 3887648 -  -9.5  -2.53641   CAATTCACGATGAAC               CCGCC TCAT GGCGG                ATCCGATTCGCACGG  68 51
        garR NONE
LQF52_RS17605 3885140 .. 3885170 - -16.2  -3.54741   CAGGACGCGGCGAAA       GCTTGCGCCACGTC GGG AACGTGTCGCAAGC       GGTCCGTTAAGCCAG 100 232
        rlmD NONE
        relA 3878213 .. 3878243 - -15.4  -3.54543   ATGGATGCGGCGAAA       GCCTGCGCCGCGTC GGG AACGCGCCACAGGC       GGCTCGACAGCGGGC 100 229
        mazG NONE
        pyrG 3875345 .. 3875370 - -17.7  -3.29109   AAAACCCTAGACGAA         CAACGCGCGAT AGCG ATCGCGCGTTG          CTGATATAACTCTTA 100 38
         eno 3873892 .. 3873917 - -12.7  -5.60993   TCCGTCATAAAAAAA         TCCAGAAACGT TTTC ACGCTTCTGGA          TTTTTATAGTTAATC 100 97
LQF52_RS17570 NONE
LQF52_RS17565 3870200 .. 3870231 - -20.3  -5.40072   CTGTGTCTAAAAAAA      CAGGGCCGCATCA GCGTTG TGATGCGGCCCTG       CCGTCAAATGAAGTT 100 52
LQF52_RS17550 3866905 .. 3866927 -  -9.2  -3.38812   TCTGCGTGAAGAAGA           GCAACGTC GCCAGCG GACGTTGC           CTTGTGATGTCTTGA  71 71
LQF52_RS17545 NONE
LQF52_RS17540 3863690 .. 3863720 - -16.2  -3.54543   ATGGATGCCGCGAAA       GTCAGTGCCGCGTC GGG AACGCGTCACTGAC       GGCTCGAATCGCGGT 100 234
LQF52_RS17525 3860382 .. 3860399 -  -4.1  -4.03586   TCGCAAAGAGAACAA             GCTGAAA ACGT TCCCAGC              TCAGCAAGCAACATT  58 408
        queE 3858815 .. 3858827 -  -4.7  -4.42806   TGATGGTGAAAGAAA                CCTGC ACC GCCGG                CTGCGTCTATAAAGG  66 106
LQF52_RS17500 3854764 .. 3854775 -  -5.8  -3.76586   CGCGAAAGAGAAAGA                TGCC GCGT GGCA                 GTTGGCCGAACAGTG  60 450
LQF52_RS17485 3850197 .. 3850211 - -11.4   -4.2704   GTCAGGAGGAAGAAA               GGCTGC CAT GCAGCC               CTCTTTGCAGACGGT  93 46
        cysJ NONE
        cysI NONE
LQF52_RS17470 3845609 .. 3845623 - -12.8  -4.78149   CCCAGAATGTAAAAA               CCGGGC AGT GCCCGG               TTTTTGTTTTTACCC 100 35
        cysG NONE
        cysD NONE
        cysN NONE
        cysC 3836672 .. 3836688 -  -3.7  -2.64375   AAAAGCGGGATATCA              GAGCT TGATAAT AGCTC              GCTTGCCAAGCAGAT  44 6
LQF52_RS17425 3836173 .. 3836186 -  -8.1  -3.16881   TACGCATCCGAGTAA               CCTGC GTAC GCAGG                CTTTCCTGAGCAAAA  64 117
        ftsB NONE
        ispD NONE
        ispF 3831893 .. 3831904 -  -3.6  -3.01125   ATTGTCGATAAACCA                GCGG CTTA CCAC                 GCGACAATTTCGCCC  45 19
        truD 3830720 .. 3830746 -  -4.4  -2.71144   TATTCTTTTCAACTA         TGTTCTGCAAAA ACG TATCGCAGCACA         TCAGGCACCGAGATC  47 26
LQF52_RS17385 3829962 .. 3829973 -  -2.2  -3.27389   GACTTAACAACAAAT                GCAT ACCA ACGC                 CACGGTATCAGGCTA  44 33
        nlpD NONE
        rpoS 3827487 .. 3827504 - -11.3  -5.65177   ACAGGCATAAAAAAA             TGGTGGG TTTC CCCACCA              TTTTTTATTTCAAGA 100 75
        gmhB NONE
LQF52_RS17335 3819094 .. 3819114 -  -2.5  -2.55015   ACTTCACTTAACGCA            CATCTTCTT GGT AAGGAGGTG            ATCCAACCGCAGGTT  40 16
LQF52_RS17330 NONE
LQF52_RS17325 3818781 .. 3818814 -  -2.3  -4.49756   TGTTAAAGAGCAAAA     CGTCGCAGTGCACCC AAAC AGGTACACTCTGAAG      TTTTCTATACAGCGA  61 48
LQF52_RS17320 3815693 .. 3815703 -  -6.8  -4.34402   TTCGTCACACCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf NONE
LQF52_RS17310 3815361 .. 3815372 -  -2.2  -2.62293   AAGCCGAACATTAAC                CCAA ATAA CTGG                 TGCTGATACCCAGAG  39 23
         rrf 3815174 .. 3815205 - -16.8  -4.73432   TGAAATACAAATAAA      CAAAAGGCCATCCT ATTA AGGATGGCCTTTTA       TCTTAATTGAAACCT 100 37
LQF52_RS17300 3813550 .. 3813564 - -11.4  -4.61231   CTATACTTTGAAAAA               CCTCGG AAG CCGAGG               TTTTTTATTATCATT 100 95
LQF52_RS17275 NONE
LQF52_RS17270 3806040 .. 3806061 - -14.5  -3.36415   TACAAACGATATGAA           TCAGCCCCT GAAA AGGGGCTGA            TGAAGGATCAGAAAG 100 33
LQF52_RS17230 3796948 .. 3796971 - -16.8  -3.26471   TCACCGGTAGACGAA          CGCCCCTTTC GCAG GAAAGGGGCG           TTTTTCATTGATGGG 100 47
LQF52_RS17210 3791980 .. 3792002 -  -7.1  -3.81929   TAACAATGGAGGAAA          CAAGCGCCAT CACT AT-GCGCTTG           TTTCAGTTCCCACTA  68 137
LQF52_RS17185 3787257 .. 3787275 -    -6  -3.74056   TAACAATCAGTTAAA             TCGCACCA TAA TAGTGCAA             AAGCACCATCCCAAC  64 47
LQF52_RS17180 NONE
LQF52_RS17175 3785209 .. 3785219 -  -5.4  -2.73124   TCCCAGTCGGTAAAT                 GTCA TCA TGAC                 TGATTCCCCAGAAAG  50 19
LQF52_RS17170 NONE
LQF52_RS17165 3783830 .. 3783844 -  -5.7  -3.41366   TTAGCTCAAAAGAGA               GAAGC CTTAC GCTTC               CGATAGTCCCCGGAC  56 17
LQF52_RS17160 NONE
        hpxK 3781161 .. 3781188 -   -12  -3.42408   AAAGAAAGGATAATA        CCGCTCAGGCTA CAGG TTGCCTGAGCGA         TTTCAGAATGAGGGT  88 85
        cysI 3779074 .. 3779090 -  -6.5  -2.64274   AGCGCTGCAAAGCTA              CCGGGAA TCC TTCCCTG              CTTGGCGCGATGCCG  51 117
LQF52_RS17135 NONE
        mtnC NONE
LQF52_RS17125 3775088 .. 3775125 -  -9.3  -2.81509   TAAAAGACTCAATCA   TCATCTAAGAACAGAGC ATCT ACCCTGTTCTTAGACTA    TTGATAAACCATTTT  66 74
LQF52_RS17120 NONE
LQF52_RS17115 NONE
LQF52_RS17110 NONE
LQF52_RS17105 NONE
LQF52_RS17100 NONE
LQF52_RS17095 3768684 .. 3768701 -  -9.1  -2.79679   AAGAGCCTCAGGATA             CGCCGCA CGGA TGCGGCA              AAACCATCACCCAAT  66 32
        mtnK 3765761 .. 3765783 - -19.2  -4.41609   CAGCATAAACAGAAA           CAGGCCGCCA ATA TGGCGGCCTG           TTCTTTCCTTTAAAG 100 507
        lpcA NONE
LQF52_RS17065 3761107 .. 3761119 -  -3.3  -4.32034   GGATTAGGACCAAAA                CGCGT TGA AGGCG                ATTTAAAAAGCCCGG  62 463
LQF52_RS17050 3758733 .. 3758754 -  -4.5  -3.91412   ATGACACTGTATAAA           TATACAGAT CAAA ATCAGTATA            GACAAGCTGCGCGAT  59 52
        dinB 3757441 .. 3757462 -  -5.1  -5.00616   GGTCTGTTCAAAAAA           CCGTACCCA GACA TGGATATGG            TTTCCATCGGGCCGA  82 211
         gpt 3755280 .. 3755310 - -16.2  -4.64144   AACAATCGTCAAAAA       CAACAATGCCCGGC TAA ACCGGGCATTGATG       GAAACGAATATTCGC 100 49
        frsA 3753755 .. 3753766 -  -4.4  -4.62069   TTGCTACGCCAAAAA                GATC CTGT GATC                 GACGGCGATTATCTG  71 104
         crl 3752809 .. 3752834 - -15.5  -2.96216   TTGTAGCAGGACAGA         CGCGTTATGCC AACA GGCACAACGCG          AAAACCTGCGAATAA  93 63
        proB NONE
        proA 3750338 .. 3750375 - -11.6  -4.89009   ATACTGAAGTAAAAA   TAAT-GCTGCGCATATC GCTTT GATATACGCAGCTATTA   AGCGATTAGGCGCGA 100 31
LQF52_RS17000 3749004 .. 3749016 -  -5.5  -3.87373   GATACGGGCCAGAAA                CCGCA GTA TACGG                GCTTTCAGTTGATTT  63 66
LQF52_RS16990 NONE
LQF52_RS16985 3743570 .. 3743580 -    -4   -3.7948   TGAAGATGCACCAAA                 CTTT TTT AAAG                 AGTTGGCTTCTACAC  56 329
LQF52_RS16970 NONE
LQF52_RS16965 3738790 .. 3738810 - -12.5  -3.63341   AATATCGTGGAATAA            GGGCGTCCT GTC AGGGCGCCC            TTCTTTTCATTACTT  95 35
        tssB NONE
        tssC 3735866 .. 3735878 -  -3.3   -3.5511   TCCCAGGCAGAAAGA                GACGG CAT CAGTC                TTATTCCTTATCCAA  50 26
        tssE 3735443 .. 3735454 -  -4.4   -2.7094   TTCCAGTGACATAAT                CAGA TCAT TCTG                 TAATGGCGGTGGCTA  47 13
        tssF NONE
        tssG NONE
        tagH NONE
        tssJ NONE
        tssK NONE
        icmH NONE
        tssH NONE
LQF52_RS16910 NONE
        vasI NONE
        tssA 3722665 .. 3722676 -  -4.4  -3.81488   TTGTTTTAAACATAA                GTGA CCAT TCAC                 TCCGAATGTCTTATT  58 36
        tssM 3719136 .. 3719155 - -13.6  -3.15996   CATCATCCAGCAATA            GGGAGCCT GAGC AGGCTCCC             GAGAGTTAATTAATA  93 35
LQF52_RS16890 NONE
LQF52_RS16885 3716120 .. 3716147 - -12.7  -5.98675   CATAAAAACAAAAAA        GCGGGTGTTGC TATCAC GCAGCACCCGC         CTGTTTATTACCACT 100 174
LQF52_RS16880 3715051 .. 3715090 - -12.2  -5.50723   TGATTAAAATAAAAA  CCTGAACTGTGGTCTGAG TCTG CTCACGCCACAGTTCATG   TTGATAAAGCATCAC 100 89
LQF52_RS16875 NONE
LQF52_RS16870 NONE
LQF52_RS16865 3710671 .. 3710701 - -12.7  -3.24188   TCATAGCAGCAGCAA       CGACCCAATAATC ACGCA GACTATCGGGTCG       AGACATGCCGTTTAT  86 86
LQF52_RS16860 NONE
LQF52_RS16855 NONE
LQF52_RS16850 NONE
LQF52_RS16845 3702979 .. 3703007 -  -2.4  -5.70761   AAAATAAAATAAAAA       GCAGGA-AGGATC ATGT GATCGTTTCCGGC        CATTTTAATTACATA  86 34
LQF52_RS16835 3702337 .. 3702369 -  -7.8  -5.26119   CTGCTAAAAATAAAA     TAGCCGAAAG-GATC ATTA GATCGCTTCCGGCTT      TCATTTACTTAATAC  91 59
LQF52_RS16830 3701028 .. 3701054 -  -5.9  -5.46698   CGTAAAATTAAAAAA        TCGGAAG-GATC GTAA GATCTCTTCCGT         CTATTTTTACATATC  87 39
LQF52_RS16825 3700623 .. 3700649 - -11.7  -5.86976   CCATAAAATAAAAAA        CCGGAAG-GATC ATGT GATCACTTCCGG         CCTTTTTATTAATCT 100 34
LQF52_RS16810 NONE
LQF52_RS16805 3697898 .. 3697925 -  -7.1  -5.98675   CATAAAAATAAAAAA        CCGGAAG-AATC GTTGG GATCGCTTCCGG        TTTTTATTTATTTTA 100 33
LQF52_RS16800 NONE
LQF52_RS16795 NONE
LQF52_RS16790 3693898 .. 3693929 - -15.3  -3.07501   ACACAATTCGCAATA      GCGTTATGGGGCA CGCTTT TACCCCATAACGC       GTGACCGATTTCAGC  93 64
LQF52_RS16785 3693341 .. 3693361 - -11.1  -4.65458   TATAGAAACAACAAA            GGAGCGGCT TAT AGCAGCTCC            TTATTTTTAGCAACG  95 75
LQF52_RS16775 NONE
LQF52_RS16770 3689926 .. 3689940 -  -8.5  -6.11644   GCAGGCAAAAAAAAA               CCCGC ACAAG GCGGG               CTAAGGTCATTCTAA 100 203
LQF52_RS16750 3685861 .. 3685886 - -10.5  -3.90048   TTTCCCTGAAAAAGA         CGCTCCGC-TAC GCG GTATGCGAAGCG         CATAGCAAAGAAGAT  82 177
        pncC 3685283 .. 3685298 -  -6.2  -2.86728   ATTACTGACATTATA              CTGTAT GCGC ATACAG               CATCAAGGTTATTTT  55 34
        recA NONE
        recX 3683552 .. 3683572 -  -2.6  -4.34263   TGGGAATAAGATAAA            TTTTCTTC GATGG GAAGTAAA            ATCCCGTGTGCGTTC  60 39
        alaS 3680758 .. 3680781 -  -9.6  -4.96848   TTCCGCAGACAAAAA          CGCCACAACC AGAA AGTTATGGCG           TTCTTGTTGGATAAC  93 64
        csrA 3680275 .. 3680305 -  -8.4  -3.95674   AAAAGCGGGAAATAA      CAAGTGCGTCCCG AGAACA CGAGACGCA-TTG       TCAATCAATATGACG  76 30
LQF52_RS16720 NONE
LQF52_RS16715 3679814 .. 3679831 -  -4.9  -2.77523   CTTTCACTAATACTA             CTTGCCTT GCA AAGGCA-G             TGTTTAATGGTGCAT  49 33
LQF52_RS16710 3679688 .. 3679700 -  -4.1  -3.18086   AAACGAGATACTTAA                GAATG GTG CATCC                GGGAGGATTCGAACC  48 16
LQF52_RS16705 3679366 .. 3679378 -  -4.9  -4.99861   GAGTAATGAGAAAAA                TATCA TTC TGATA                TCAGCAGAACAGAAG  77 209
        yqaB NONE
LQF52_RS16695 NONE
        gshA 3676390 .. 3676402 -  -5.5   -3.1506   AAAGCTGTCTAGTAA                CGGCA TAA TGCCA                CCTCCTCATAGAAAA  54 171
        luxS 3675833 .. 3675853 - -11.9  -5.67967   ACGAGCACAAAAAAA            GAGAGCCAA CGT TCGGCTCTC            TTTTTTATCTGCGCC 100 52
         ffh 3673354 .. 3673381 -   -12  -4.44914   TAGTGAATAAAACAA        CTGGGCCCCATC GAGG AACGGAGCCCAG         TATGTCATATAAAAA 100 129
        rpsP NONE
        rimM NONE
        trmD 3671683 .. 3671720 -  -7.7  -2.66272   CCCTAGGTAAACTGA   TAGTTGGGTTCGCCAGGT CAA ACC-GGCGTAACCACCTA   ATACTCTTGTTGCTC  59 23
        rplS 3671244 .. 3671266 - -16.4  -5.64274   TCAGGCATAAAAAAA           GGGTTTAGCC TTT GGCTAAACCC           CTTATAAATAACAAC 100 66
LQF52_RS16635 NONE
        tyrA 3666227 .. 3666251 - -10.8   -4.8143   CGAAGAATTGAAAAA         GCCATCCT-GG TATC CCTAGGATGGC          TTCTTAAACACAACC  95 57
        rluD NONE
        yfiH 3661326 .. 3661340 -  -5.7  -3.83998   CTACTGGAGATTAAA               TGAGG TCATC CCTCA               AAAATTTCAAGGTTA  61 101
        clpB 3658657 .. 3658684 -  -9.2  -4.13014   CTCATAGTGTGAAAA        CGGGGACATC GATTGGCA AATGTCCCCG         TTGATTACTTACCGT  80 47
LQF52_RS16595 3656547 .. 3656557 -  -3.2   -4.8048   TGGGGACACGAAAAA                 TCCG TAC CGAA                 TTAAAAATCCGGCAC  69 147
LQF52_RS16590 3656393 .. 3656430 -  -6.5  -3.45839   ATTGTTAAAGAGCAA   TATCGTAAACATGACTC CGAA GAATCATCTTTAAGATA    TTCATGATAATGTCT  60 58
LQF52_RS16585 3653307 .. 3653317 -  -6.8  -4.34402   TTCGTCACACCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 3653046 .. 3653059 -  -4.5  -2.82742   ATTTCTCTACAACCA               CCAGA TTGC TCCGG                CTTACTGCTTAATTT  47 44
LQF52_RS16575 3652896 .. 3652948 - -15.2  -3.14528   ATACAAATTCTAATA TTCAGATATGCAGAAAGCCCTAAGC TAAC GCTTAGGGCTTTCTGCATAA-TAAG TGGCGGAACGGACGG 100 26
LQF52_RS16570 3651896 .. 3651922 -  -5.9  -5.00339   ATCAATAATGAAAAA        TAGCCCTCCTAC AGAT GTAG-AGGGCTT         TTTTTATAGCGATTA  78 38
LQF52_RS16555 3648820 .. 3648843 -  -3.1  -4.11216   CGGGCATCCGGAAAA          CGAGCGCTGT GATGA AC-TCGCTCG          CGCAGCCGCAAGTGC  58 97
        dnaQ NONE
LQF52_RS16540 3647354 .. 3647377 -   -14  -5.42514   CCAGAAATGAAAAAA          CCCTGAATCA TTGT TGATTCAGGG           TCTTCATATAAGTGG 100 38
LQF52_RS16500 NONE
LQF52_RS16495 3637675 .. 3637697 -  -4.8  -4.60487   CAGCAGCTTGAAAAA           GGCTGCAAAA TCA TTTTGCTGGC           CGCGCCGCTGGCGGT  71 120
         hpt 3636302 .. 3636313 -  -5.8  -4.07568   GGCTGCGGTGGAAAA                CCCA GAAT TGGG                 TTTGATTAACAACTG  67 386
LQF52_RS16475 NONE
LQF52_RS16470 3634087 .. 3634104 - -12.7  -4.53034   TTTAGATAAGCAAAA             GGCGGTG TTAC CACCGCC              TTCTCATTTTTGCAG 100 51
        hrpB NONE
        mrcB 3621230 .. 3621248 - -12.4  -2.87344   CACGCGCCCGACATA             GGGGGCTA CGC CAGCCCCC             TATGAACCCCGGCTT  82 340
        fhuC NONE
        fhuD 3619152 .. 3619167 -  -2.4  -2.93455   GCAGACAGAGAATTA              GGCATG TGTT CTCGCC               TCCAATGCCTGATTC  41 7
        fhuB 3617099 .. 3617137 - -13.9  -2.71011   ATCTCCGGCTAATCA  CAC-GGCGTCGGCGGA CTTCCCTC CCCGCCGACGCCCGCG   TTATCTCACCTGCTT  86 26
LQF52_RS16390 3614806 .. 3614828 -  -4.1  -3.03007   AACACCGCTGGAACA           CACGGAC TATCCCGCC GTCCGCG           CCTACTATGAGCGGT  45 105
        erpA 3612126 .. 3612149 - -13.2  -5.60993   TCTGCTATAAAAAAA          CCGTGTCTCG GCAA CAAGACACGG           TTTTTGTTTTTTTAG 100 65
         dgt 3608322 .. 3608338 -  -5.1   -3.2655   TAAGGAAATATTGAA              CGGCTTT ACA AAAGTCG              CGATTTCCGTTGCTG  52 52
        degP 3606635 .. 3606668 -  -2.9  -2.67428   TTCAGGAAGAAGCGA     GAGGTAGCCGGGCAC CCGC GTGCCCGGCCAAAAG      ACTAACGTAACAAAT  40 84
LQF52_RS16345 3605254 .. 3605277 -   -11  -3.26449   CTGGATATAAGGTAA          TCCTGATGCC GTGC GGCATCAGGT           GAATACGGTAGAGGA  78 85
LQF52_RS16340 3603943 .. 3603962 - -12.2  -5.09426   TTTAACCTGAAAAAA            GCCGCTAT TGTG ATAGCGGC             CTTAATCCGTCAGAC 100 49
        cysT NONE
        cysW NONE
LQF52_RS16325 3601092 .. 3601123 - -15.4   -4.4767   GTATTGACGACAAAA      GCAAAAAACCCGCGA ATT TCGCGGGTTTTTT-C      ATGCCTGAGATCTAC 100 44
LQF52_RS16305 3597238 .. 3597265 -  -7.7  -3.17212   CTAGTATTCGATGAA        GTACCGCAGCC TTATTC AGCTACGGCAC         CTAAATATCACGCCA  64 33
        gltX 3594933 .. 3594965 - -14.2  -4.61566   CCCTAAATCATAAAA      TAAGAAGCCCCAGC ATTTG GCCGGGGCTTCTTG      TGTATTCATGCAGTA 100 45
LQF52_RS16270 3593682 .. 3593710 -  -6.1  -3.29461   GAATGTTCGTGATAA        TCAACCAAACA GAGGGAG TGTTTGGTGGA        GCTAAGCGGGATCGA  59 19
LQF52_RS16265 3593434 .. 3593452 -  -2.3  -5.00616   GTTGTCTTCAAAAAA             CGAAGGC GGCCA ACCGTCG             TTTACAAATGATGGT  69 154
        grcA 3591917 .. 3591932 - -10.4  -5.77988   AGAGACATAAAAAAA              GGGAGC TTCG GCTCCC               TTTTTGTTAAGGCTT 100 51
LQF52_RS16245 3589652 .. 3589678 - -10.9  -3.76402   AGTTCACTCAGCAAA         GGCAGACGC AGCAACAAG GCGTCTGCC         ATCTACATAAAGAGA  85 28
        rpoE 3587048 .. 3587059 -  -5.8  -4.16943   GCGGATAGCTGAAAA                CGCT CGCT AGCG                 CTGAATAAGCGGTTG  67 20
        rseA NONE
        rseB NONE
        rseC 3584837 .. 3584851 -  -2.8  -3.34629   AGAGGAAAGCAGGAA               GTAAAG TGT CATTAC               GTGGCAAACATCGTG  46 107
        lepA 3582813 .. 3582825 -  -7.7  -3.26298   ATTACGGCAAACATA                TTGGC CAT GCCAA                CTCCTCAGAATTTAT  64 37
        lepB 3581562 .. 3581576 -  -2.8  -3.12895   TGTGTTACCAATAGA               TCAACG ATG CGTCAA               AAACAGCAGCATACG  43 304
         rnc NONE
         era NONE
        recO 3579157 .. 3579172 -    -4  -2.64155   TCCTCGGTAAAGTCA              TG-CACG ATA CGTGGCA              GTTTACACCGATGTC  44 69
        pdxJ 3578399 .. 3578412 -  -5.9  -2.78813   TCCGAGCCCAAGAAT               CGCCA TTAG CGGCG                TGCTTCTCGCATCAG  50 17
        acpS 3577975 .. 3577988 -  -2.3  -3.90048   GCTGTGGGAAAAATA               CGTGC TCAT GCACC                ATGCCGACAGGATTT  53 61
        pdeH 3576343 .. 3576353 -  -5.4  -4.17789   TAATCAGAAAGGAAA                 GACA GCC TGTC                 AGATAGGCGATATTT  67 155
LQF52_RS16170 3574135 .. 3574175 - -15.8   -4.0044   AAGCACTACGAGAAA GATAATAAAAAAGGCGCCC GACA GAGCGCCTTTTTTATT-TC  ATTTATCAATGATCG 100 31
LQF52_RS16150 3558449 .. 3558465 - -10.1  -4.55295   TTTTTGATAAAGAAA              GGAGCCA GAT CGGCTCC              TTTTCCCCTTTCCTG  89 41
LQF52_RS16145 3557777 .. 3557790 -  -5.2  -3.07307   CAAATGTTTATCGAA               GCGC TGTATC GCGC                CACCAACAGTATTGC  50 306
        murQ 3554085 .. 3554095 -  -4.6  -2.71731   CTTACCCGCCAATTA                 GCGC CTC ACGC                 AGATAACCATTGTGC  47 1
        yfhb 3553397 .. 3553407 -  -2.4  -3.05816   GGATGGCGTATTGAA                 GGCG TTA CTCC                 AGCTGTTGCAGGCTA  42 19
        tadA 3552814 .. 3552832 -  -4.5  -3.24022   AAACCTGCATAAAAT            GCCGCTAC TCCT GC-GCGGC             GTTTTTCTCGCTTTT  50 11
        purL 3546659 .. 3546700 - -18.1  -4.09864   AGTGACGGGTTAAAA CGTCACGCGGCCAGAAGAA TAGC TCCCTCTGGCCGCGTAACT  GAATAGGCGGTGCCT 100 513
LQF52_RS16105 NONE
        qseG NONE
        glrR 3542725 .. 3542737 -  -5.5  -3.53224   TATGTTGCGGCCAAA                GCCGA GCA TCAGC                AAGTGAACAGCATGT  57 114
        glnB 3542123 .. 3542143 - -10.4  -3.65581   AGTAAGTGTGAAGAA            GCCAGCCC TCATC AGGCTGGC            TTCTATACTCGTCAT  78 233
LQF52_RS16070 3535899 .. 3535918 - -10.7  -5.26316   GCACGCCATAAAAAA            CGCCAGC ACTCAG GCTGGCG             TTTGGGAAGTGTTCC 100 68
LQF52_RS16065 NONE
LQF52_RS16060 NONE
LQF52_RS16055 3532622 .. 3532636 -  -5.8  -3.88291   GATTATGGTTATAAA               TGATAA TAG TTATCA               TTATTGAAATAATAT  63 98
LQF52_RS16050 3531390 .. 3531413 -  -3.9  -6.04378   AAAGCACAAAAAAAA          GCACTG-ACC GATGA GATTCAGTGC          TTTTCTATTATCTGG 100 75
LQF52_RS16045 3529303 .. 3529350 -  -3.5  -2.52896   CCACTGGTCAATCGA GCCTAT-A-GCCGCATGCCGC CTCACTGC GCAGCACGCGGCGCGATAGGT TAGAAACGCTGCCAG  42 25
LQF52_RS16040 3528848 .. 3528865 - -11.3  -2.84634   CTCTATACGACTAGA             CGGTGAG TCCC CTCACCG              TCTTACCTTACCAAA  78 102
        trmJ 3523912 .. 3523930 -  -4.6  -4.53303   TACCTGTAGATAAAA             CATGTATT ATG AAAACATG             TATTGGCAGAACATA  69 103
        iscR 3523357 .. 3523382 - -11.9  -4.35926   ATCGGAAAGGCAAAA         CGTGACGAGTA AGGG TGCTCGTCACG          TTGAAGGTGTATCAG  95 37
LQF52_RS16005 NONE
        iscU 3521474 .. 3521494 -  -9.7  -3.06671   ACATCGACGGGAACA            GGCACCG AGAGAAA CGGTGCC            CCGCCGAGTTCAGCC  71 48
        iscA 3521038 .. 3521054 -  -5.1  -2.74183   ATAACGTAAAGTAAT              CCATAGT GGT ACTCTGG              GAGTTCTGGGTAGCA  49 84
        hscB 3520480 .. 3520502 -  -2.7  -5.14563   TGGCTGACGAAAAAA          CCGGTATGGT AATC ACCAT-CGGG           TTTCCCGCCGGATTA  73 46
        hscA NONE
         fdx NONE
        iscX 3518008 .. 3518028 -  -6.7  -4.81212   GGCACGAGAATAAAA            CGGGCCACC CAA GGCAGCCCC            GTAATCTTTCTATTC  80 35
        pepB NONE
        sseB 3515183 .. 3515221 - -12.5  -2.62396   CATTTGCCTACATTA  GCCATCAGGATAGAGCCG CTTT CAGCGCTATCCTG-CGGC   AGGAAAGCCACTTTT  75 473
         ndk 3509922 .. 3509953 - -18.1  -4.51743   TTATGACCAAAGAAA      CGCCCCGGATAAG TGCAGG CTCATCCGGGGCG       CAGCATTGTACAAAG 100 160
LQF52_RS15935 3508492 .. 3508505 -  -3.7  -3.81447   CAGACCTGACAACAA               CGCGG CGCG CCTCG                CAATTTGCTTACTTT  55 110
        pilW NONE
        rodZ NONE
        ispG 3505420 .. 3505448 -   -11  -2.73721   AGGAATCGTGAATTA       GGCGG-GTGACGG CAGA CCGTCACGCCGTC        AGAGTTACTTATCTA  74 30
        hisS NONE
LQF52_RS15910 NONE
        bamB 3502142 .. 3502166 - -13.6  -4.16158   GATAAAAAGACGAAA          CGGCCCCTGA TAGTG TCAGGAGCCG          TTATACGAGCACACC 100 74
         der 3500551 .. 3500576 - -17.7  -4.36914   TCTTCTCTGATAAAA         CGGGGCGAATA TCGC TATTCGCCCCG          TTAATACATCACTTA 100 34
LQF52_RS15895 3499557 .. 3499575 -  -3.8   -3.6106   GCCAACAGCGCTAAA             TCACGCCC AGT GAACGTAA             ACCATAGAGCCCCAG  53 2
LQF52_RS15890 NONE
LQF52_RS15885 3498651 .. 3498668 -  -3.3  -2.64735   ACCGCATCCACATCA             GCTACTG CCAA CCGCAGC              AGAATCACTATACCG  40 126
        guaB 3493852 .. 3493880 - -14.6  -3.11999   AGTAAACCCAGCTAA        CCGCTCCGCCTC ATTCA AAGGCAGAGCGG        CGCGAAATAGTACAG  89 62
        guaA 3492155 .. 3492172 - -10.5  -4.28049   TTCAAAATGTCAAAA             GCCCGCA ATTA CGCGGGC              TCCTGGGCATTTCTT  85 74
LQF52_RS15845 3489481 .. 3489496 -  -8.2  -5.50499   TCAGACGTAAAAAAA              CCCGCA GTCA CGCGGG               TTTAATAGGCCTTTT 100 61
LQF52_RS15835 NONE
LQF52_RS15830 NONE
LQF52_RS15825 3487521 .. 3487540 -  -9.2  -4.46514   AGTCATTTAAACAAA            GCGCCGTC ATTC GATGGCGC             CTTCTCGCTTATCTC  88 56
LQF52_RS15805 NONE
LQF52_RS15800 NONE
LQF52_RS15795 3482127 .. 3482146 - -13.6  -3.62572   CACGATGATGCTAAA            GCGCCATG TTCG CATGGCGC             TTTCGCGCAATTATA 100 66
LQF52_RS15785 3479280 .. 3479291 -  -7.2  -3.32844   CTCGCGATGGGAGAA                GCCG ATAT CGGC                 ATCTTCGCTGACAAT  61 495
LQF52_RS15775 NONE
LQF52_RS15770 3477376 .. 3477396 -  -2.5  -4.45945   AGGTAGGAATTAAAA            GCGATAAGT AGG ACGTACCAC            CCAGTTATTTCAGCA  63 30
LQF52_RS15765 3476347 .. 3476369 - -10.6  -4.70583   TTGATTAATATAAAA           CGAGATAGCA CAG CGCTATCCCG           TCTGTTTTCTTTATA  95 43
        thiM NONE
        thiD 3472101 .. 3472112 -  -3.6  -2.75159   TCACAGCAAAGTAAC                CGGA TGCC CCCG                 CACTGTCACGCCAAA  43 137
        psiE 3471178 .. 3471197 -  -3.4  -2.79823   CCGGCCAAAATGAAG            GCCGCGCT GGGA AGCGCCTC             ATACGTGCTGCACGC  41 466
LQF52_RS15675 3451976 .. 3452004 - -15.3  -4.08945   AGGACGTCGCGAAAA        CCAGTGCCGCGTC GGG AACGCGTCACTGG        TGGCTCGATTAGCGG 100 234
        ugpC 3442642 .. 3442659 -  -9.9  -4.07568   GGGCGTTTCCCAAAA             GGCTTTC TACG GAAAGCC              TTTTTCCGTTATAGC  81 261
        galT 3438261 .. 3438276 -  -2.6  -2.58731   GTAGAGAATCAATAC              GGCTCAT AAA ATGA-CC              TCAAATTTGCTCACG  40 26
        galK 3437064 .. 3437095 - -14.6  -3.83205   AGGCTCGACAGTAAA      TTGAAAAGGTGAGG TATC CCTCACCTTTTCCA       GCCTAAACTTAACTC 100 34
LQF52_RS15600 NONE
LQF52_RS15595 3433340 .. 3433366 -  -7.3  -5.93809   CCGTCATAAAAAAAA        CGGCAG-TGCGA ATCT TCGCAGCCACCG         TTTTCATCAACTAAT 100 64
LQF52_RS15570 3426285 .. 3426295 -  -4.6  -2.78712   TCCCGAACGGAACCA                 GCGC TTC ACGC                 GTTTTCTCCTTCATC  47 20
        pstA NONE
        pstB 3423679 .. 3423693 -  -2.2   -5.8096   CACAAAAAACAAAAA               CTTTTA AAT TAAAAA               AATAATAATTAATCG  91 148
LQF52_RS15555 3422981 .. 3423006 - -16.3  -4.50661   AAGGCATAATGAAAA         GCAGGTTCTCT TTTA AGAGAACCTGC          TGAGAATGCGGTGTT 100 39
LQF52_RS15545 3421576 .. 3421602 -  -7.3  -4.00882   GAATAGAAGAGTAAA        GCGTTTGCGCCA GGGA TGGCGCAATC-C         GAGCGTACAGGGATG  72 112
LQF52_RS15510 3414257 .. 3414287 - -24.2  -5.06735   GAGAAAGGATAAAAA       TGAAACGGCCCGGA AAA TCCGGGCCGTTTCA       CATCATTGGCGGTCA 100 72
        cysS 3412617 .. 3412640 -  -9.6  -5.42259   TCATGGCGAAAAAAA          GCCCGCAA TTTCATTT TTGCGGGC           TTTTTATTTACTGAA 100 63
LQF52_RS15485 3407643 .. 3407661 -  -3.9  -2.66538   ATAATTCATTACAAT             GCAAAAA TGAAC TTTTCGC             GAATAACAAAATGTC  44 65
        arnB NONE
        arnC NONE
        arnA NONE
        arnD NONE
        arnT NONE
        arnE NONE
        arnF 3399962 .. 3399974 -  -4.8  -4.28774   TCATTGAACTGAAAA                GCGT CAGCC ACGC                CGCTTTTGCCGTCGG  66 110
LQF52_RS15430 3395363 .. 3395387 -  -8.6  -4.04579   GGTAGAAACAGCAAA          GCCACTCAGC GTGAA ACTGAATGGC          TTTTCCCTTTGCTCA  78 50
LQF52_RS15420 3393653 .. 3393669 -  -6.5  -2.70923   GCCCAATAGCACAAT              CGCTAAC GCG GGTAGCG              CAGCGCTTCCACAAA  53 11
LQF52_RS15415 3393143 .. 3393170 -  -9.3  -4.15833   AGCAGGATGGGAAAA        TAGCGGTCATT ATTGAA AATAACCGCTA         TTTACTTCAATTCGC  82 32
LQF52_RS15410 3391473 .. 3391487 -  -5.8  -2.57931   TTCATCCTTCAGAAT               TTTTGA TAT TCAAAA               TGCACTTTTAAACTC  50 123
LQF52_RS15405 NONE
LQF52_RS15400 NONE
LQF52_RS15395 3388609 .. 3388630 - -10.9  -5.60993   CCCCCCATAAAAAAA           CCCCAGATA AACC TATCCGGGG            TCTTTAAATAACGAG 100 64
LQF52_RS15390 NONE
LQF52_RS15385 3386091 .. 3386118 - -11.3  -5.18371   CCCGACAAAATAAAA        CCAGCCCAGTG CAATCT CACTGAGCCGG         CAACGTTTATGCTAT 100 37
LQF52_RS15375 NONE
LQF52_RS15370 3382638 .. 3382663 -  -8.3  -3.41569   GGATTTATCTAAATA         TGGAGGTGAGT ACCC ACCCACCTCTA          TTAATCGTCTTATTA  69 38
LQF52_RS15335 3376751 .. 3376785 -  -5.9  -4.04415   TTAAACAACAGGAAA    GATAGCCGCACTTCACA TCC TGT-AAGCACGGCT-TC    GATGTTCATCCGTTA  65 76
        alaC 3373176 .. 3373189 -  -5.9  -3.62849   TCTAGCAAATGATAA               GCCGC TGTC ACGGC                ATGTTTATGTGCTCC  59 82
        gspS 3372368 .. 3372384 -  -5.8  -3.25823   CCGTTCCCACAGCAA              CGCCTC ATCAA GAAGCG              CCCCATACCGATACG  54 352
LQF52_RS15305 3370042 .. 3370054 -  -3.3  -3.02461   TAATGCGTTGGAACA                GACGT TCT ACGGC                AGAGAAATATCCAAT  45 19
LQF52_RS15300 3367908 .. 3367937 - -14.3  -3.40309   GATAATCATCCATAA       TACTCCCCACGCC GATT GGCGTGGGGAAAA        TGCCTTATTCCGTTG 100 30
        gspC NONE
        gspD NONE
        gspE NONE
        gspF NONE
        gspG NONE
        gspH NONE
        gspI NONE
        gspJ NONE
        gspK NONE
        gspL NONE
LQF52_RS15245 NONE
LQF52_RS15240 NONE
LQF52_RS15235 3355591 .. 3355616 - -11.9  -5.59879   GATAAAGATAAAAAA         GGCTGATGGTA TTTA TACCCTCAGCC          TATTTTTATGCCTGC 100 99
LQF52_RS15220 NONE
LQF52_RS15215 NONE
LQF52_RS15210 NONE
LQF52_RS15205 3350082 .. 3350099 -  -5.5  -3.40775   ACGCCGAGCTAAAGA             GCGGC GCAGATAT GCCGC              AATCATAGCAGAGTT  56 76
        dbpA NONE
LQF52_RS15195 3347918 .. 3347955 -  -2.9   -5.4505   TGGCTTAATAAAAAA   TAGATGCCAAGACAAC TCTATTC ATTGCCCTGGCAT-TA   AAGAAAGATATAACG  79 85
LQF52_RS15185 3346561 .. 3346584 -  -3.2  -4.14392   GCCGAACGTTCAAAA          TGGCTTAGCCT ATC AGGCTAATC-A          TGGTGGCAGCAGGGG  57 19
LQF52_RS15180 3345572 .. 3345601 -  -3.8  -3.26318   TTTTTAACAAGAAAG       GCGTGGAAATAAA AATCA TTTATTTCCA-AC       AATGAACACAAACAT  48 118
LQF52_RS15175 3344627 .. 3344652 - -11.3  -2.87891   AATAAACCTAATAAT         GAGAGGTATAA AAAA TTATACCTCCC          TTACCATCATAACTA  78 38
LQF52_RS15140 3338742 .. 3338762 -  -7.5  -3.57797   GTTAAATGGATATAA            CGAGCCCCT CCT AAGGGCTAG            TTGCAGGTTCGATTC  62 282
        mlaA 3336484 .. 3336499 - -10.4  -4.73108   TTTATAAAAGCAAAA              GGCACC CGCA GGTGCC               TGAGAAATGAGCGAT  91 52
         mqo 3334539 .. 3334554 - -11.8  -5.31456   TGAAGGCACAAAAAA              GGCCGC TTTC GCGGCC               TGACATCGTGACTTC 100 54
LQF52_RS15110 3332607 .. 3332628 - -13.1  -3.80858   TCAGAACGTAGTAAA           GCAGGTAAG GCGA CTTACCTGC            TTTTTTATTGCTCAT 100 118
LQF52_RS15100 3330608 .. 3330629 - -11.6  -3.29972   AGGGCATGAAATAGA           CAGGAGCC GATCAA GGCTCCTG            CGGGAGCATAGTTAA  83 37
        fadI 3329032 .. 3329045 -  -2.3  -2.94099   TGTTTCCATTACAGA               CGGTG TTGT CACGG                AGAAAGGCTGTTGAT  41 44
        fadJ 3326768 .. 3326796 -    -3  -3.51708   CACCGCCCAAATTAA       CGCCAGTCAGGCC AGCA AGCCAGAA-GGCG        CGTATAAAGATACCG  49 59
        sixA 3319640 .. 3319672 - -13.6  -3.60048   TCTTCTTCAAAAAAC      GATGAGGCGTGTAA GTTCA TTACACGCCTCATA      CCGTATGAATTCAGG 100 59
        prmB NONE
        aroC NONE
        mepA NONE
LQF52_RS15035 NONE
LQF52_RS15030 NONE
LQF52_RS15025 3313960 .. 3313990 - -17.6  -3.54741   CAGGACGCCGCGAAA       GCCAGTGCCGCGTC GGG AACGCGTCACTGGC       GGCTCGACTAGCGGT 100 269
        fabB 3310328 .. 3310350 - -12.7  -5.45652   AGCGCCAACAAAAAA          CCCCGCTGGC GCAA GCC-GCGGGG           TTTTTATTTATTTCA 100 81
        pdxB 3306577 .. 3306606 -  -4.3   -3.2281   AAATCATGAATGGAA       CCGACAGACGA TAGTGACG CCATCTGTCAG        TTTATGAATAAAAAA  50 80
LQF52_RS14995 NONE
        truA 3304495 .. 3304526 -  -5.8  -3.53012   CTTCTTCTCCCCAAA      GTGTCTATCGAACG CACG CGGTCGATATACGC       AAAGCAGCCGCACTA  57 168
LQF52_RS14985 3303782 .. 3303794 -  -3.3  -5.24531   ACTGTGGATAAAAAA                CTGGT CAA ACCGG                ATGTTAAAATACTTC  77 43
        accD 3302630 .. 3302640 -  -6.8  -3.29144   CTACTCGGTCGAGAA                 CGAC GTG GTCG                 AGTACCACACGTCCT  61 55
        folC NONE
        dedD 3300415 .. 3300452 -  -7.8  -2.64337   CATCTTAAAACAGAT  GCGGGG-CGACGTATCAC CGGA GTGA-ACCTCATCCCCGC   GGCCTGCTTTTGCTT  59 112
        cvpA NONE
        purF 3298109 .. 3298136 -   -17  -3.92996   CTCTACATACAACAA        GGGGGAGGACAC TTTC GCGCCCTCCCCC         TTCAATACAGCCTTA 100 56
LQF52_RS14955 3297320 .. 3297341 - -10.9  -5.68039   AAAGGCACAAAAAAA           GGGCAGTAA ACGT TTACCGCCC            CGAGAGAAAAAAATA 100 63
LQF52_RS14950 3296169 .. 3296182 -  -4.5  -4.29621   GATAAAGAAATGAAA               GTCAC AGTG GCGAC                ATTAGCCGCCGTAGA  64 27
LQF52_RS14945 NONE
LQF52_RS14940 NONE
        hisP 3293748 .. 3293774 - -10.1  -3.99275   GGATAGAAGAGTAAA        GCGTCCGCGCCA AGGA TGGCGCGG-CTC         GAGCGTACAGGGATG  82 105
        yfcE 3290818 .. 3290828 -    -4  -3.63805   AGGGTATACGCTAAA                 TTAG TGC CTAA                 TCGTGACCTGTGCAA  53 15
        yfcD 3289985 .. 3290011 -  -7.9  -3.54256   ACTCGGAAAAATAGA         CGCCGCAGC GGAGAAAAA GCAGCGGCG         AGGCAGGGAAGGCAT  67 40
LQF52_RS14890 NONE
LQF52_RS14885 NONE
LQF52_RS14880 3283270 .. 3283285 - -10.4  -5.60993   TCTGCCATAAAAAAA              CCTCGC GGAT GCGAGG               TCTGATCATATTTAG 100 71
LQF52_RS14875 3281074 .. 3281100 - -12.3  -3.57144   CGCCTCATCGTTAAA         CAGGCAGACGC CCTGT GCGCCTACCTG         AAATGTCTGGAAGAA  81 226
        lrhA 3277803 .. 3277848 -  -4.7  -3.92373   CACCTTAGTCATAAA TCATCATCATTCGGGGTGCAT CCCT ACCCTCCCCGAATGATAGTTA ACTACCCATTACGAT  59 40
LQF52_RS14855 NONE
LQF52_RS14850 NONE
        nuoC NONE
        nuoE NONE
        nuoF 3272095 .. 3272114 -  -5.6  -2.57564   GCATGCTTCCATAAT            GGCCCGTG TCAC CACGAGCG             CTAATCAAAAATTCT  50 172
        nuoG 3269351 .. 3269370 -    -2  -2.60244   GCGTTAACCAACTCA            TTGTGCGG CCTC CCGCAGAT             TTTCAACGGTTGCAC  39 3
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL 3264988 .. 3265006 -    -3  -2.98813   AGGGGAGAAGAATTA             GCCAAGGT AGT AGCATGGC             GTTTTGTGTCCCTAA  43 123
        nuoM NONE
        nuoN 3261949 .. 3261972 - -15.4  -5.60993   CTCGCCATAAAAAAA          CGCCGTTGAT TCTC ATCAACGGCG           CTTCATTACTCAAGC 100 57
        elaB 3261431 .. 3261445 -  -3.5  -3.16191   CTAGATTGGCAGGAA               CTAGC GCTTA GCCAG               CAGCAATCCCAACAC  46 11
LQF52_RS14765 3254391 .. 3254420 - -15.9  -3.60948   TAATACATCCCTAAA       CAATACGGCCTCA ATAA TGAGGCCGTATTA        CAACGCTTACTGAAT 100 32
        hutW NONE
        hutX NONE
LQF52_RS14740 3248458 .. 3248468 -  -5.4   -3.4376   ACAGATTGACTATAA                 CAGT TTG ACTG                 ATGCCGGGATGAATT  57 74
LQF52_RS14735 3247691 .. 3247704 -  -4.5  -4.57073   CATCGGTCTGAAAAA               CCACA AGAA TGCGG                CGCTCGCTGCTTATA  69 201
LQF52_RS14730 3246877 .. 3246897 -  -4.7  -2.85216   GACGATCGAGAAGGA            CGCTTTATC GAC AATAACGCG            TTGTTCGAGGGCTAT  48 37
LQF52_RS14725 NONE
LQF52_RS22210 3245171 .. 3245186 -    -6  -3.14132   TTCGGGGTGCAGGAA              GGCCGC CAGC GCGGTC               CGAAAGATAGCAGGT  57 52
        fdhE 3244146 .. 3244173 -  -9.8  -3.08812   TTTTTTGCAAGAAAG        GCGGTGAAGCCC GAAC GTGCTTCACCGA         TTAGACTGGCTATTC  71 35
LQF52_RS14680 3235844 .. 3235860 -    -5  -4.56775   ATTTCCCGCGAAAAA              GCCTCG GGTCA CGGGGC              GGCGGCGACTGAGCG  73 200
LQF52_RS14670 NONE
        ntrB NONE
LQF52_RS14660 3232334 .. 3232347 -  -2.4  -2.90161   TACCAATCACAATCA               GATG CGGTTT CATC                ATCGTTCCGGCCTCG  41 44
        nirB 3228150 .. 3228163 -  -2.4  -2.87211   AGGTTGTCCGACAGA               CATG CGCGTT CATG                ATGCTTTCGCCATAG  41 21
LQF52_RS14650 NONE
        cobA 3224587 .. 3224607 -  -2.4  -2.53831   TCGTCAAAAAGAATC            TGTTGCCG TCAGG CGGCTGCA            TGCTTTTCCATCATC  39 13
LQF52_RS14640 3223042 .. 3223052 -  -6.8  -3.30028   AAAGAGGGAGAGGAA                 GGCT ATC AGCC                 TTGCCCGGACATCGT  56 441
LQF52_RS14625 NONE
LQF52_RS14620 NONE
LQF52_RS14615 NONE
LQF52_RS14610 NONE
LQF52_RS14605 3216405 .. 3216424 -  -5.7  -3.55444   GCGCGACGCGGGAAA            CGCTGGTG AAACA CACC-GCG            ATGATCGCCGCCGAC  57 138
LQF52_RS14585 3211838 .. 3211857 - -10.8  -2.63723   TGTTCATGAATTAAT            GGTAGAAC GATC GTTCTACC             TAGTCAAGCGTCAGC  74 442
LQF52_RS14580 3211253 .. 3211275 -  -4.8  -2.71712   CGGTTTTTTTGAAAC           TCAGGCCT TAGTGAG AGGCCTGT           TTCAACAGCAGCTGC  49 10
LQF52_RS14575 3210548 .. 3210562 -  -4.9  -4.84359   TTAGGTTGAGAAAAA               GCCCC CGGCT GAGGC               AGTCGTCTGGGGCTT  75 62
LQF52_RS14565 3208571 .. 3208585 -  -2.8  -4.11773   AAATACCTGTGAAAA               TTCTTG TAA CGAGAA               GTTGATACCACAGGC  56 306
LQF52_RS14555 NONE
LQF52_RS14550 NONE
LQF52_RS14545 3203682 .. 3203717 -  -6.3  -2.78679   CGCTCTGAGCGAAAG    CGGAAGTTCGTAA GGGAAATATT TTACGAACCTCCA     GATGATAGAAAATCG  53 258
LQF52_RS14540 3201492 .. 3201515 -  -6.7  -2.80622   AATACGCATTCAAAT          CGCCCCA GTTCAGATGA TGGGGCG           GTACTCAGCTCACCC  55 382
LQF52_RS14530 NONE
LQF52_RS14525 3198268 .. 3198286 -  -6.6  -3.06261   GTTTAACGCCGAACA             CCGCCCGG TTA CCGAACAG             CTCAGCCGCTGGTAT  54 50
LQF52_RS14500 3193494 .. 3193515 -  -7.3  -2.85013   ATCGGATAACAGAAC           GGTCCTGAA CGGA TTCAGGACA            CCTCCATTAGCGGGG  59 18
LQF52_RS14480 NONE
LQF52_RS14475 NONE
LQF52_RS14470 3185165 .. 3185223 - -13.9  -3.13403   CGTCGTCGATCAATA GCGGCATATCGACAGGTCGTGGCGACCA CGCA TCG-CGCCACGACCTGTCGACGTTTCAC CTACTGCGTAGGATT  93 26
LQF52_RS14450 NONE
LQF52_RS14445 NONE
LQF52_RS14440 NONE
LQF52_RS14435 NONE
LQF52_RS14430 NONE
LQF52_RS14425 3174399 .. 3174434 -  -6.8  -2.78495   CAGCACCAAAATCCA    CCAGCGCCTG-TCAG GACATCT CTGATCGGGCGCAGG    CGACGCGGTGTGCCG  55 0
LQF52_RS14405 3168889 .. 3168913 -  -2.7  -4.56133   CTGCAAGAAGGAAAA          GCAGACCTGAT TGC ATTTGGTCGGC          CATACATTGCCAACC  67 172
LQF52_RS14385 NONE
LQF52_RS14380 NONE
LQF52_RS14375 3159730 .. 3159757 -  -9.3  -2.78816   GCAGGCTGGATGACA        CTCGCCACA-AT GTGTG ATGTGTGGCGAG        TGCTTTTCATATGAA  66 48
LQF52_RS14370 3158164 .. 3158180 -  -3.7  -4.68424   CAACGCAGGCAAAAA              CGCATTC AGA AAATACG              AAGCGGCGCGACTTT  72 281
LQF52_RS14350 3151298 .. 3151315 -  -8.4  -3.72051   CGCAATAAGCTTAAA             GCCGCA CTCCTT TGCGGC              TTATCATCTCCGACT  75 40
LQF52_RS14345 NONE
LQF52_RS14340 3150189 .. 3150214 -    -9  -2.73364   TTGTGATTTGAATCA         CGTCCACTCC TGGCAC GGAGCGGACA          GAGAGTAAAATCACC  66 269
LQF52_RS14335 3148975 .. 3148991 -  -4.4  -2.73771   GTATAGTGTTCAAAT              CAACTG TAAAG CAGTCG              GTCAGAACCCCTAAG  47 48
LQF52_RS14330 3147882 .. 3147893 -  -2.2  -3.84451   CGCTTTAAACGTAAA                CCAA TCAG CTGG                 CATGAAGCTATCTAA  51 219
LQF52_RS14250 NONE
LQF52_RS14245 3130805 .. 3130842 -  -9.9  -3.53531   GCACTAACATTACAA   CACAGAGTGTCATTAAG TGCA CCAAATGACACCCAGTG    ACATTTTTAGATGGA  75 268
LQF52_RS14240 3129811 .. 3129840 -  -9.4  -3.17763   GCTACAGGTTATGAA       GGAGTCCACA TAAACTACCC TGTGGACTCC        TGAATATTACAGATT  72 68
LQF52_RS14235 3128762 .. 3128776 -  -6.4  -3.36878   GCTATGCACTGACAA               CAACGC CCT GCGTTA               CACTTTGTTTATCGT  59 418
LQF52_RS14230 NONE
LQF52_RS14225 3127235 .. 3127276 -  -8.7  -2.70532   ACGCTGATAAAGGGA TGACCTACGCGCAGAGAAG TTAC CTTCTCTGCGCGTTTTTTA  TTATTAGGATAAATA  64 451
LQF52_RS14195 3123897 .. 3123929 -  -2.1  -4.37711   CCAGTAAATTTAAAA      TTTATTTTTGGTTAT TTT AAACCCAAAAATGAA      GATTTAATTCATTGA  59 112
LQF52_RS14190 3123402 .. 3123425 - -11.1  -3.06583   ATAACACCCTTAAGA          GCAGATCCT GATCAA AGGATCTGC           TTTTCAGACTGCGAG  76 117
        iraP 3120417 .. 3120437 - -12.5  -4.30933   TATAAACGCAAGAAA            GGCGCGGAC AAC GTCGGCGCC            TTCAATTTTTTTCAG 100 156
LQF52_RS14160 3118193 .. 3118204 -  -4.4  -3.27022   CCCAGTGGATATGAA                CACA ACCC TGTG                 CAAACAACTCGTCAC  50 394
LQF52_RS14155 3117594 .. 3117613 -  -2.8  -4.25283   ACGCTGTTATTAAAA            GCAATCGGC CAG GCGGA-TGC            CGGTAAAGTTATCAT  62 231
        uvrY NONE
        uvrC NONE
        pgsA 3113730 .. 3113747 -  -5.5  -3.41327   CAATAAAATTATCAA             GCAACCG TGTT CGTTTGC              TGATTTTTACGGCGC  56 46
LQF52_RS14130 3113527 .. 3113544 -  -5.5  -3.18264   GGTCTTAGTGACCAA             CATCCGC AATT GCCGATG              TTTTAAATTGGAGCG  54 34
LQF52_RS14125 NONE
LQF52_RS14120 3113273 .. 3113286 -  -9.5  -5.64274   TCAGGCACAAAAAAA               CCGCC TTTC GGCGG                TTGAATTTTATTTTA 100 72
LQF52_RS14115 3112551 .. 3112588 -  -7.9  -3.01422   TAGCTCTATAAATCA   TTAAGCGCCAGAAACTAA AGG TTAGTAA-TGGCGCTTAA   CTACTGGTACTAATG  62 35
LQF52_RS14100 NONE
LQF52_RS14095 NONE
LQF52_RS14090 3108920 .. 3108932 -  -4.7  -2.75183   ACGGGCAGTGAATTA                CGCCG TTA CCGCG                CCCGTCTCGCTCGCT  47 10
LQF52_RS14085 NONE
LQF52_RS14080 3105653 .. 3105667 -  -3.6  -3.42583   CGAACATACCCAGAA               TCATCA TCA TGATAA               AAGCCCTATACGTGA  50 31
LQF52_RS14075 3105183 .. 3105206 - -12.4  -3.29591   ATCAGGGAAAGCCAA          GCCCATCGTC CGCG GACGGTGGGC           TTTTTTCATCGAGTA  90 59
LQF52_RS14070 3103858 .. 3103888 -  -9.8  -3.89215   GTTCATAAATGTAAA       GTGGTTGCATCTCA TAG CGAAATGCAACTAC       ATATTTTAAGCAAAT  81 31
LQF52_RS13985 NONE
LQF52_RS13980 3090158 .. 3090181 -  -6.6  -5.24989   GCAGACATGAAAAAA          CCGGGCAACC TTGC AGCTGTCCGG           TTTGATGTTTAGTAG  87 72
LQF52_RS13920 3081610 .. 3081626 -  -5.8  -2.81642   AGAGCAGTGAGGATA              CCACGC GCCGG ACGTGG              CTAAAAACTCCGGCA  50 308
LQF52_RS13910 3081257 .. 3081288 - -11.7  -5.16071   AAGTATTAATAAAAA      GGCTGAAGAGCTT GGAAAA AAGGTCTTCAGCC       GAGATATAAAAATTA 100 101
LQF52_RS13900 NONE
LQF52_RS13895 NONE
LQF52_RS13890 3079083 .. 3079115 -   -10  -3.86524   ATAGGGTTTTATAAA      CTTGCTAGTGCATT AATCA AAGACACTAGCAAG      TCGTAAAATGGAAAC  82 58
LQF52_RS13880 NONE
LQF52_RS13875 3077126 .. 3077139 -  -9.5   -5.4251   TTTAGATACAAAAAA               CCGCC TTTC GGCGG                TCTACGACATTGCAT 100 255
LQF52_RS13850 NONE
LQF52_RS13845 NONE
        lpxL 3071352 .. 3071377 -  -2.5  -2.70532   ACGTTCAGAAAGCCA         GGCAAACCTTA TTGA TCAGGATTACC          GACACTTGATACAGG  41 200
LQF52_RS13835 3066724 .. 3066748 - -13.7  -5.67967   AGTAGCATAAAAAAA          TCCGTAATCCC TGT GAGATTACGGA          TTGTTACACAAGTAC 100 49
LQF52_RS13830 NONE
LQF52_RS13825 3060856 .. 3060870 -  -8.6  -3.10409   CACGAATTGATTCAA               TTGGGT ATG ACCCAA               AGACGCACACGCTTG  60 383
        dsrB 3058313 .. 3058346 -  -9.7  -3.52909   TCAAACCATGAAAGA     GATCGTCGATGCCGTT ACC AACGTCACCGAC-ATC     ATGGGTGAGATTGCT  71 393
LQF52_RS13800 3055496 .. 3055506 -  -6.8  -2.94099   CTTTGCCAGGACACA                 GTCG CAA CGAC                 AACAAAGCATACCGC  56 214
        flhD NONE
        flhC 3053854 .. 3053864 -  -2.4  -4.70534   GAAAGAGAGATAAAA                 CTGC GGA GCCG                 TAGCCAGGACGTTCT  64 104
        motA NONE
        motB NONE
        cheA 3049833 .. 3049846 -  -4.5  -2.77899   CTGTTTTATTAAGCA               GCAGT TTCA ACCGC                ACGCTTTTCACGATT  47 5
        cheW 3049256 .. 3049290 -  -7.1  -3.40258   AATACAGCTAAGGAA    GGTTTTC-GGGGCCAC TTTC GTAGCCCCTGAAGGCC     AATGGATTAGACTTT  63 32
LQF52_RS13765 3047392 .. 3047419 - -14.2  -2.94872   GCGAGTTAACAATCA        CCCAGCCACCTA CATG TAAGCGGCTGGG         GATGAGTTCAGTATT  89 82
        cheR NONE
LQF52_RS13755 3045050 .. 3045062 -  -4.8  -3.15999   TGCTTATATACGTAA                TGCC TGTCC GGCA                GAGATTTGTGCCAAC  52 1
        cheY NONE
        cheZ 3043857 .. 3043891 - -12.4   -2.6027   GGAAAAGCGAATTTA     GCTATTTATGGCCA TAAACAC TGGCCATAAATAAC     AGAGCGATGTGTTCG  81 90
        flhB 3042551 .. 3042568 -  -2.7  -4.04394   GGTAAACGAAGCAAA             GA-GGCCA AAT TAGCCATC             AGTAGTATTCTCTTT  56 17
        flhA NONE
LQF52_RS13730 3040014 .. 3040036 -  -9.2  -4.14511   AATTGCATTCTAAAA           GTCTCTGC GTTTTGG GCAGAGAC           TTTTGACTATCGAAA  80 56
        flgB 3037887 .. 3037898 -  -5.8  -3.23216   CGCTACGATCACGAA                CCTG ACTG CAGG                 ACTGACATCATGCCT  54 7
        flgC NONE
        flgD 3036711 .. 3036739 -  -4.7  -2.98782   AAATTGATTAAATCA        TATTCCAGTTA GTAAGTT TCACTGGAATA        ACATGAAATTTATAC  49 43
        flgE 3035410 .. 3035423 -  -5.3  -3.40403   TCCCCGTTAGGATAA               TTAGC GCAT GCTAA                CCAGTGTTTGCAGAA  54 12
LQF52_RS13690 NONE
        flgG 3033684 .. 3033696 -  -2.7   -2.9006   AATCTATTTCACATA                TTCAC GGG GTAAA                TCAAAACCATAATGG  42 152
LQF52_RS13680 NONE
LQF52_RS13675 NONE
        flgJ 3030768 .. 3030781 -  -6.7  -4.00348   GCGCAATTAATCAAA               TGCTG AAAG CAGCA                AATACGCTACATAAG  68 85
        flgK 3029048 .. 3029065 -  -2.7  -3.64682   TATTAAATGGTCAAA             CTAGCTA CGGG CAGCTAA              TAACGCGTCAAATAT  50 8
        flgL 3027953 .. 3027995 -  -6.4   -5.5604   CGAAGGAATAAAAAA TGGCATGTCA-TCCATTCA ATATAA TGAAGGGAGTGACACGCCT AAAAAATACGCCCGG 100 93
        fliE 3015803 .. 3015824 -  -4.5  -3.65046   CCCTCAGCCGAAGAA           TTCTTGGAT TGGC ATCCAATAA            GCAATGGGACGAATT  55 461
LQF52_RS13570 3012659 .. 3012680 - -10.2  -6.30182   GGACATAAAAAAAAA           TAGCGGGT GTAAAA ACCCGCTA            TTTTCATGCTATTTG 100 61
LQF52_RS13565 NONE
LQF52_RS13560 3008342 .. 3008370 - -14.9  -3.33492   TCACCCATTGTACAA        TTATGTCTTCATT TCA AATGAAGACATAA        TTGTACAAAGCAATT 100 107
LQF52_RS13555 NONE
LQF52_RS13550 NONE
LQF52_RS13545 NONE
LQF52_RS13540 3003413 .. 3003425 -  -2.7  -3.73859   CATGACAATATATAA                CTTCA ATG TAAAG                CGATAGCATCGTTCA  52 190
        fliZ 3002442 .. 3002459 -  -2.6  -4.17762   CAGTGTTGAAAATAA             GTGGGA GGAAAG TCCCTC              GCATCGGCGAGTCAG  58 438
        phoH 3001354 .. 3001387 - -16.9  -4.53303   CACCGCCATATAAAA     GAAAACGCCGCTGAT GCAA ATCAGCGGCGTTTTT      TTATGCTGGTGGCAC 100 71
        betI NONE
        betB NONE
        betA 2993828 .. 2993852 -  -8.6  -4.41047   ATTCCTCAAGGAAAA          GTGACATCAC TGATG GTGTTGTCAC          TCATAGTAATGGTGC  84 141
LQF52_RS13495 2993074 .. 2993100 - -13.1  -3.36018   AAGCACCAGATAACA        CTGCGGGCGAAA AACC TTTCGCCCGC-G         TTATCCGTTTATTTC  95 80
        matP 2989909 .. 2989924 - -10.4  -5.65513   TATTAACGAAAAAAA              CCTCGC TCCG GCGAGG               TTTTTTTATGCCGGA 100 146
LQF52_RS13465 2986688 .. 2986698 -  -6.8  -3.51924   CCGCGATGCACATAA                 CTGC GAT GCAG                 AGCTGGCATCCGTCG  60 420
        helD 2981792 .. 2981802 -  -6.8  -3.71448   TACGAATAAACAACA                 GCTC ACA GAGC                 ACACGCTTTACGCTA  62 444
LQF52_RS13435 2980196 .. 2980207 -  -4.4  -3.14878   CGTTGTAATGGAAGA                TGAC GAAG GTCA                 ACCGATTCATACTTA  47 233
        yccX 2979473 .. 2979496 -  -7.4  -4.43879   AGCAGGCAACTAAAA          TCGCCGGCTT ACCC AAACCGGTGA           AATGCATCTAGCGTC  77 49
LQF52_RS13415 2977804 .. 2977816 -  -6.2  -3.91897   TGCCGCACCGAGAAA                GCCC CATCT GGGC                TGAGGGATCCCCAGA  66 48
LQF52_RS13405 2976710 .. 2976731 - -12.3  -4.78661   AGCCAAAAACGAAAA           CGGGCTAGC CTAA GCTAACCCG            TTGAATTTTGTGGCG 100 36
LQF52_RS13370 2970605 .. 2970620 - -10.4  -3.56378   CTGCAAAAGACAAGA              TCCCGC ACCT GCGGGA               TTTTTTGTGTCCGTA  77 377
LQF52_RS13355 NONE
LQF52_RS13350 NONE
LQF52_RS13345 NONE
LQF52_RS13340 NONE
LQF52_RS13335 NONE
LQF52_RS13330 NONE
LQF52_RS13325 NONE
LQF52_RS13320 NONE
LQF52_RS13315 2964477 .. 2964490 -  -3.1    -3.452   GCCAAATACTCATAA               CTCCT CCTC AGGAA                CAAGCACGAACGACT  50 6
LQF52_RS13310 NONE
LQF52_RS13305 2962020 .. 2962039 -  -4.4  -3.73224   TGATTTTTCATGAAA            TCATTAAA TTGA CTTAATGA             GGCATCAACACCATG  58 197
LQF52_RS13300 NONE
LQF52_RS13295 NONE
LQF52_RS13290 NONE
LQF52_RS13285 2959959 .. 2959975 -  -6.5  -5.50723   GTATGAAAAGAAAAA              CCCGC ACTGATG GCGGG              TTGGATTGTACGCAT 100 65
LQF52_RS13275 NONE
LQF52_RS13270 NONE
LQF52_RS13265 2958333 .. 2958349 -  -8.7  -2.83715   GGCAGCATTATCACA              GGCACTC AGT GAATGCC              TGCTGTAATGCCTAC  64 182
LQF52_RS13260 2957829 .. 2957844 -  -7.5  -5.85737   ATAGCAATAAAAAAA              CCGCC TCAATG GGCGG               CTAGTCTGTTCTTTC 100 216
LQF52_RS13255 2957072 .. 2957088 -  -8.7   -4.2828   CTGTAGCTAGGAAAA              CACTGCG GCG CGCAATG              CCCGTACTTTACAAA  80 96
LQF52_RS13250 NONE
LQF52_RS13245 NONE
         gpW NONE
LQF52_RS13235 NONE
LQF52_RS13230 NONE
LQF52_RS13225 NONE
LQF52_RS13220 2950425 .. 2950437 -  -3.3  -3.16695   ATAAATTGAAAATGA                GTCAG CCC CTGCC                GGTTAAAGCATGTCG  46 62
LQF52_RS13215 2949327 .. 2949343 -  -4.3   -2.8655   TTTAGCCATATCAGA              CCACCGT TGC ACAGAGG              GATGCATTTACCCGG  48 4
LQF52_RS13210 NONE
LQF52_RS13205 NONE
LQF52_RS13200 NONE
LQF52_RS13195 NONE
LQF52_RS13190 NONE
LQF52_RS13185 NONE
LQF52_RS13180 2945600 .. 2945621 -  -7.3  -2.58579   CCAACGTTGTATAAT           CCATATTCC AGGC GGAATCTGG            CCCCCACCGATAAAA  57 58
LQF52_RS13175 2943656 .. 2943700 -  -3.8  -4.65916   CTCATTGCAATAAAA TATCTATTGTTATCGGCTTAC CAAA GCAAACCTTTA-CAATAGATA CCTAGCGTACATATT  69 50
LQF52_RS13170 2943110 .. 2943129 -  -4.2  -5.00616   TCCGGGCGTAAAAAA            GCCCCG AACTATAG CGAGGC             TGGTTTTCAACTTAA  74 58
LQF52_RS13165 NONE
LQF52_RS13160 NONE
LQF52_RS13155 NONE
LQF52_RS13150 NONE
LQF52_RS13145 2938093 .. 2938104 -  -2.2  -3.96624   GAGGGTCACCACAAA                CAGA TAAT CCTG                 CCCTGGCCTGTCGGT  53 407
LQF52_RS13135 2935293 .. 2935309 - -10.8  -5.04601   CGCAGAAATGAAAAA              GGCCGC AGTTA GCGGCC              ATAGATAGGGTTAGA 100 46
LQF52_RS13130 NONE
LQF52_RS13125 2932139 .. 2932160 - -12.3  -4.63479   TAGCAGAAACGAAAA           CGGGCTAGC CTAA GCTAACCCG            TTGAATTTTTTTGGC 100 448
LQF52_RS13110 NONE
LQF52_RS13105 NONE
LQF52_RS13100 2929500 .. 2929516 -  -6.5  -3.88787   TGATACGTGCATAAA              GCGAGCC GTT AGCTCAC              CGCCATTTACCGTTA  66 38
LQF52_RS13095 2928669 .. 2928682 -  -4.5  -3.39668   CTGCAAATGGCACAA               CAGCA TAAC TGCCG                CTTCGCTCTCCTTAC  51 279
LQF52_RS13080 2927571 .. 2927589 -  -3.2  -3.54768   GAAATAAAAATTTAA             TATTTCTG TCA CATAAATA             GTTTAATTAATTTCT  50 87
LQF52_RS13075 2927116 .. 2927157 - -14.6  -5.14965   AGGGGGAGCAAAAAA GACTCACCCAGACACCTT TTTATC AAGGTGTCTGGGTGATTT  AATTTTGTTCTCTAT 100 79
LQF52_RS13070 2924625 .. 2924662 - -18.7  -4.66537   CTCGCCAATAGAAAA   CCGCCATTGTGCTACACA ATT TGTGCA-CACAATGGCGG   TCAGTCAGCAATACA 100 57
LQF52_RS13055 NONE
        mdoH 2917898 .. 2917921 -   -11  -5.92337   ACAGACGAAAAAAAA          GCAACGGCGA TTGA TTGCCGTTGC           TTTATCTTTCACACT 100 65
LQF52_RS13035 2914215 .. 2914235 - -15.5  -3.01637   CATCAACACGACACA            GCCCTTTCC ATT GGAAAGGGC            TTTTTATTGCACGAT  93 51
LQF52_RS13000 2909831 .. 2909850 -   -15  -4.12532   GTTTCTATAGACAAA            CACCCGCC AATT GGCGGGTG             TTTTTTATGTACAAC 100 47
        rluC 2904828 .. 2904858 -  -9.1  -4.65263   ACGGTGTAAAATAAA       TCGGGATAGCC CGATGAAGC AGCTATCCCGA       CAGACAAAAGCATGT  90 55
        yceD NONE
        rpmF 2903362 .. 2903377 -  -4.8  -3.53444   GTATTGCCTTGCAAA              TAATTC GCAA GAATTA               CTTAGCAATGACCTT  56 23
        plsX NONE
LQF52_RS12965 NONE
        fabD NONE
        fabG 2899511 .. 2899524 -  -2.3  -4.25848   AATTTCCTATCAAAA               CTCGC TTTC GCGAT                GGTTTTCGTAGTGTA  57 144
        acpP 2899217 .. 2899241 - -10.8  -5.60993   TGCGGGACAAAAAAA         CTTAGGCGGTC GAAT GACCGCCTA-G          ATATGTTCGCTTACT 100 36
        fabF 2897895 .. 2897907 - -10.5  -6.11644   GCAGGCAAAAAAAAA                CCCGG AAA CCGGG                TTTTTTTAAGACGTA 100 48
        pabC NONE
        mltG NONE
         tmk NONE
        holB 2894294 .. 2894313 -  -2.2  -2.87003   CCACTAACAACATGA            TATTTACT CAAT AGTAATTA             AACAGAAAAAGGATG  41 23
LQF52_RS12920 2893407 .. 2893441 -  -4.9  -3.08056   ATCGCTAAAAAACAC     GTCCCCCTGAAGAGG AAAAA CCTAATCAAGGGGAT     TATGAAGCGCTATTA  51 78
        ptsG 2891709 .. 2891722 -  -9.5  -5.67063   CTGACCATAAAAAAA               GGGGC TTTC GCCCC                TTTTTACCACTCCCC 100 50
LQF52_RS12905 2889240 .. 2889256 -  -2.9  -4.07568   GCCTTCTCCTGAAAA              CCGTGAC GCT ATCACTG              CTGTAGTAAGGATTT  56 94
        hinT NONE
LQF52_RS12895 NONE
        lpoB NONE
        thiK NONE
        nagZ NONE
        ycfP 2885075 .. 2885130 -  -8.4  -4.63675   AGGAAAGTAAATAAA TTGC-GTCATTCCTCCTGATTCCCCTC AAA AAAGGATACCAGAAGGAACGACAGCAG CCGTTAACAAGTCAT  89 54
LQF52_RS12870 2883430 .. 2883464 - -12.4  -4.52589   GCCGCTGATAGAAAA    GAATACGGGCATGAA ATTGCG TTCATGCCCGTAT-C     AGAAAGCTGTCAGCT 100 49
LQF52_RS12865 2882416 .. 2882445 - -14.4  -5.32944   CGTACAATGAAAAAA       CCGCGAG-CACCT TCTTC AGGTGTCTCGCGG       TTTTTAGAGATGGTG 100 71
LQF52_RS12850 2879196 .. 2879222 -  -9.4  -3.75153   CGCCGTTAAGCCAAA         GACGGGACGC CAACCAC GCGTCTCGTC         AGGCTATTCTGTTGA  79 44
LQF52_RS12840 2876375 .. 2876405 -  -7.4   -2.6914   TATTGCTGACATAAT       GCGGTGGCGCACGC CAT GCGTTCATCACCGT       CCTTGTCATGCACTT  57 155
LQF52_RS12835 2875402 .. 2875421 - -13.6  -3.86202   TTTCACCACACTAAA            CGGGAACC TTCG GGTTCCCG             TTATATACCAATCGC 100 115
        lolC NONE
        lolD 2869867 .. 2869900 -  -3.1  -3.27774   CAGGCCAATCAGCAA     CGAGAGCGGAGGAAAT CTC ATTGCCG-CGCTCCCA     TCAGAGTCAATTCCT  48 9
        lolE NONE
        nagK NONE
        cobB 2866316 .. 2866345 -  -3.5  -4.23892   CTGAATTATCTAAAA       GAACTGGCTGCCGA AGC CCGGCGGACA-TTC       TGATCGATCTAAGCC  60 479
LQF52_RS12795 NONE
LQF52_RS12790 NONE
        btuC 2863210 .. 2863221 -  -2.2  -3.52079   CAAGAGTGGATAGAA                CAAG ACAT CTCG                 CTACAGTCGATTGCG  47 26
LQF52_RS12780 NONE
        btuD 2861716 .. 2861739 -  -5.2  -3.28864   CGATTACCATAAAAC          CGCC-GAGGCC ATC GTCCTCTAGCG          TTTGAAAATGCTAGG  54 128
LQF52_RS12770 NONE
LQF52_RS12765 2859859 .. 2859886 - -12.2  -3.36492   TCTCTAACTTTATAA        GGTGCGATATGTT TTT AACAT-TCGCACC        AAATAAGAAAAAATA  85 302
LQF52_RS12755 2856663 .. 2856677 -  -5.7  -3.35679   CTGTGGCATCCAGAA               CCAAC GCCGG GTTGG               TTATTTCTCGATGAA  56 344
        ppsA 2848228 .. 2848283 - -11.3  -3.02626   TAAGAGCGAGATACA CGGGGCGACCACGGAG-TGAGGTATCCC TGC GGGA-ACCTCATCTCCGT-GTTTCCCCT AAAATCTGACATCGC  79 94
LQF52_RS12700 NONE
        menI 2841690 .. 2841720 -  -9.8  -3.79113   ATTTTCTCAGAACAA       CCGAACCAGACC CGCCAGC AGTCTGGTTCAG       TGCTTCATGTTTACA  79 44
        sufA NONE
        sufB NONE
        sufC NONE
        sufD NONE
        sufS 2835552 .. 2835568 -  -2.1  -3.06696   TCCTCCCCGAACAGA              TCCGCGC GCG GCGCTTA              ACTGCCCAGCAATCG  42 23
        sufE 2835049 .. 2835076 -  -9.2  -6.04324   TGAAAAAACAAAAAA        GCGCTG-GACG TTTTTTC CGTCACAGCGC        TTTTTTATACTTCAG 100 65
LQF52_RS12655 2833267 .. 2833285 - -14.6  -4.11484   GTTAAGTCGTGAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGCCTGCG 100 163
        bglG 2829413 .. 2829455 - -15.3  -6.30182   TGAGACAAAAAAAAA CCTAAATCGCTTTTCCCAAT AAGC ATTGAGAAAA-CGATTTAGG TTTTGCCTGCCCGTC 100 345
        bglF 2827448 .. 2827458 -  -3.2   -3.1739   ATATCAGCGGATTAA                 CGTC AAC AACG                 CGCCCTGTTCCTGCA  46 3
        ascB 2825943 .. 2825983 - -13.6  -2.80583   TAGTAAAAAATAGAG TTCGCATTCATTC-CAGAA TTTT TTCTGAGAATGAATGCGTA  AATAACGTAGCGATA  86 48
LQF52_RS12625 2824059 .. 2824080 -  -7.2  -2.72344   TCCTATTTTTAAGGA           TGGCAGGC GTTTAA GCCTGCCC            TATTTGCGGAAATCC  58 45
LQF52_RS12620 2822809 .. 2822833 -  -5.7  -4.08706   CTGCCATCAGAGAAA         GCAGGCATGC CACGAC GCA-GCCCGC          AGCATGAAGACGCTA  65 38
LQF52_RS12615 2821308 .. 2821321 -  -9.5  -2.70525   TGTGTCCAAATTAAG               CCGCC TACT GGCGG                TCATTTTAGTTATCC  69 430
        nrfA NONE
        nrfB 2819231 .. 2819245 -  -3.5  -2.83908   AAATTGACGACGAGA               GCAAC TCATG GCTGC               CTCTTATTACCCAGA  44 16
        nrfC NONE
        nrfD 2817588 .. 2817604 -  -2.9  -2.73309   TGGCAATAACAACAT              CAACAGG CCT CTTGCTG              GGAATTAGACAACGG  41 30
LQF52_RS12590 NONE
        nrfF NONE
        nrfG 2814428 .. 2814462 -  -2.1  -2.60211   ACGGTGCCAAAAACC    GCGCTTGC-CCCTCTT ATTC AAAAGGGAGCACACGT     TATTTCTGGCTATTC  39 25
        ccmA NONE
        ccmB 2812941 .. 2812957 -  -8.7  -3.04715   CACTTTGCGTAAAAC              TCATCCC AAC GGGACGA              TGAAGGCGATCCTGA  66 51
LQF52_RS12565 2812168 .. 2812179 -  -4.4  -2.74322   GCCAACTTGTGAAAG                CGAT GTTC ATCG                 TGCTATTCCTCCTTT  47 20
        ccmD NONE
        ccmE NONE
LQF52_RS12550 NONE
LQF52_RS12545 2808941 .. 2808976 -  -4.6  -2.90723   GCACGCTGAACGACA    GCAGCAGTGCGCTAAG GAAA CTCAGCACTCTCATGC     GCCGCCCTCCTTGCT  48 20
LQF52_RS12540 NONE
        ccmI 2807595 .. 2807626 - -10.2   -5.7827   AACAGAAACAAAAAA      CAACAAAAGGGCGA TATA TCGCCCTTGTGCTA       TTGATGCTGAAGATA 100 49
        narQ 2799142 .. 2799156 -  -5.6  -2.52896   TCATCTTTCAAGTTA               CGTGTG TGC CACTCG               AATTATTCAGGGTAG  49 28
        narP 2798431 .. 2798451 - -11.8  -3.31905   ATCTTTCAGACAACA            CCGCGGCC TTACT GGCCGCGA            GTCTCCAGATACAAC  85 13
LQF52_RS12465 2795230 .. 2795269 -  -3.6  -4.74013   GGGAAAGAGAGAAAA  GCA-GTGGCAGAGTC GCGGTAAAGAT GGCTCTGCCACACGC  CAGAGGTTCACATAA  69 213
LQF52_RS12460 2794002 .. 2794016 -    -5  -3.74693   CGGCATGTGATGAAA               TCACCA CGC TGGTAA               CCGATGATGAAATCT  58 147
LQF52_RS12450 2791856 .. 2791866 -  -6.8  -2.87564   CCACGGTGTGAGACA                 TCCC TAC GGGA                 GTCTCATCATCGTGT  56 131
        katG 2789308 .. 2789350 - -12.7  -4.72272   GTCGCGCAGCAAAAA TGATGCTCCCCGCGCC-GTG AAAA CACCGGCGTGGGGAGCGTAA CGTCTTACTCTGCCA 100 30
LQF52_RS12435 2788208 .. 2788218 -  -2.4   -5.1861   TTGAGTAGGAAAAAA                 GCGG GAA CAGC                 GCGACACCATGGGTG  74 331
LQF52_RS12430 NONE
LQF52_RS12425 NONE
LQF52_RS12420 NONE
LQF52_RS12415 NONE
LQF52_RS12410 NONE
LQF52_RS12405 2783896 .. 2783906 -  -6.8  -4.07568   GCCGTCCCGCCAAAA                 TGCG ATC CGCA                 TGATGGTCGTCCATC  70 85
         uca 2780161 .. 2780191 -  -8.3  -3.14132   TCGCGTCTGTATTAA       CAGGCCAGAGG CTATTTATT CCTCCAGCCTG       AATTTTCAGAATTGC  67 44
LQF52_RS12385 2777310 .. 2777331 - -11.6  -4.95843   ACAGAAAAGAGAAAA           CCGGACGA TACAGT TCGTCCGG            TGTGCAAAAATAGGC 100 52
LQF52_RS12370 2774165 .. 2774208 -  -7.6   -4.3898   ATGATGGGTATAAAA GCGATTCAGACACGTTTTATG TAA CATC-AACGTGTCTGAATACC TAACCCGCACAAAAA  77 52
LQF52_RS12360 2772317 .. 2772337 -  -9.7  -5.22312   ATTGAGATCAAAAAA            CGGGTGC AATAAAG GCACCCG            TAGGAAGGATTTACG 100 89
LQF52_RS12345 2770547 .. 2770558 -  -2.2  -4.35874   CAAGATAACTTAAAA                CAAC GATG GCTG                 ACGGGACTCTGCTGG  59 8
        slyA 2769577 .. 2769591 -  -4.2  -3.53012   GTGTCGCGGGTCAAA               GCGC TACGGGT GCGC               TGAACCGCACACAGG  52 309
        anmK 2767818 .. 2767832 -  -2.8  -3.21938   GCAAAATCTGATTAA               TCCG CGTTGAC CGGA               TAAATCGCACCTAAC  45 7
LQF52_RS12325 2767324 .. 2767349 -  -5.5  -2.57211   ATGTCGGGCCAGAAG         CGGGCG-AAAAT CCC ATTTTGCTCCCG         TACCCGAAAAATCGC  50 75
        pdxH 2766443 .. 2766469 -  -5.9  -2.87881   CAACGCCGTGAGAGA        TGCG-CAGCATA CCTG TCTGCTGTCGCA         TGATGATTTCGCTGC  51 164
        tyrS 2765067 .. 2765082 - -10.4  -4.52415   ACTTACAAGAAGAAA              GGGAGC TAAC GCTCCC               TTATCGGTAATGCTT  89 39
        pdxY 2764120 .. 2764144 - -15.8  -3.19293   AAGGCTAACATGCAA          TAACGCCCCG GTATT CGGGGCGTTA          TACGTTTTACGACAG 100 32
LQF52_RS12300 2761299 .. 2761328 - -12.9  -3.75578   AGAGAGAAGAGAGAA       GAGAAAAACGGCC CGAA GGCCGTCTGTCTC        AGTGCATTAACCTGA 100 48
        acnA 2758326 .. 2758358 - -13.4  -3.06796   TTCGACTTGAGCGAA      TCCACCGAGAGCCG GATTT CAGCCCTCGGTGGC      GAGACATAAAATTAC  86 37
LQF52_RS12280 2755611 .. 2755634 -    -6  -4.04806   CTGGATATGAAATAA          CGATCCCG TTTCGCGT CAGGATCG           TTTCTTTCAATGCTC  68 74
        pgpB 2753877 .. 2753900 - -13.2  -5.36441   TTCCGACATAAAAAA          TGCGGATGAC GAAT GCCATCCGCA           GGGTACGTGCTACAG 100 89
LQF52_RS12265 2752656 .. 2752673 -  -4.9  -2.89527   CGAACAGCATAACGA             CTCCT-CT ATC AGCAGGAG             CTTACGCTCCTGTCG  50 47
LQF52_RS12260 NONE
LQF52_RS12255 NONE
LQF52_RS12250 2749236 .. 2749247 -    -3  -3.39216   TTTTTACCCAAAAAC                GAAT ATTT ATTC                 ATATCAAATCAAAAA  46 144
LQF52_RS12245 NONE
LQF52_RS12240 NONE
LQF52_RS12235 NONE
LQF52_RS12230 2744235 .. 2744251 -  -3.7  -3.11634   GCGCAGAGTATCGAA              CGATC GGTGGAA GATCG              TGCCCGTTTGGTGAC  45 498
LQF52_RS12220 2743186 .. 2743200 -  -2.8  -2.94681   GCAACAGAAACAGCA               GTTCTA ACA TAGAGC               AAATTCCTTAGTGGG  42 33
        lapB NONE
        pyrF NONE
        yciH 2740510 .. 2740520 -    -4  -4.15249   AAAGATGAAATTAAA                 CAAA CGT TTTG                 CAACAGCCGCTCTGG  60 271
        araD 2739412 .. 2739433 - -11.6  -4.15703   TCCCACAAATAACAA           TAGCGCCG TATTTG CGGCGCTA            TGGCTTAAAGGTCAT  93 61
LQF52_RS12170 2730285 .. 2730300 -  -3.2  -4.08919   AAATGGCAAATGAAA              TAGCCC TAAT GGGATA               GGTTCTAAGCCTGCA  57 30
LQF52_RS12160 NONE
LQF52_RS12155 2724955 .. 2724978 -   -16  -6.17268   GCATAACAAAAAAAA          CGCCCCGGTA ATAA CACCGGGGCG           CAACAGGAAGAAATA 100 47
LQF52_RS12150 2721727 .. 2721754 -  -7.6  -3.51161   GAAACGGCCAGACAA        TGGCGAGCGCCC TTTC AGACGCCCGCTA         TCAGCCTTACCCTTT  65 62
LQF52_RS12145 2720655 .. 2720682 - -11.4  -3.29266   ATAGCATTATAAAAC        TGGATGACCGAT TTTT ATTGGTCATCCA         TTTATTTTTGAATAA  83 47
LQF52_RS12105 NONE
LQF52_RS12100 2712039 .. 2712056 -  -8.4  -5.81412   TTCAGGCAAAAAAAA             GCCAGC ACGTCG GCTGGC              TAAAATAATACTGGA 100 215
LQF52_RS12095 2710281 .. 2710302 -   -13  -4.91429   AAACGGGAAAGAAAA           TGCGGGCG AATTAA CGCCCGCA            CGATAATCAATAGCT 100 62
        pspA 2708358 .. 2708370 -  -7.7  -2.78384   CGTTTTCTCACGACA                GCCAT CCG ATGGC                GTTTACGCTCTACTT  60 39
        pspB NONE
        pspC 2707639 .. 2707688 - -12.4  -3.09842   GCAGCGAAAAAACAG CGC-GACATTATCCACTCT-CGAC TCAA GTCGTACGGTGGATAATGTCAGCG AAAGCGTATAACCGA  83 48
LQF52_RS12045 NONE
LQF52_RS12040 2693442 .. 2693472 -  -5.4  -4.58213   TAAGCAACGATAAAA       CGACGATGGCAC ACTATCG GCACCATCGTCT       TCACCCTTAACGCCC  72 32
LQF52_RS12035 2691781 .. 2691794 -  -2.3  -3.03635   GAAACGGGGTTAAGA               CAGCG GCGT CGTTG                CCATCGCCACAATGG  42 6
        tyrR 2690043 .. 2690060 - -12.7  -4.63527   GCATTACGTGAAAAA             CGGCTGC GCAA GCAGCCG              TTTTGTTATTTACTC 100 35
LQF52_RS12015 NONE
        zntB 2685598 .. 2685615 - -11.3  -5.76949   GAGGGGCAAAAAAAA             GCCGACA AAAC TGTCGGC              ATGGTGTGAATCAAT 100 237
LQF52_RS12005 2685011 .. 2685050 -  -9.5  -3.16218   CATAACGAATAGAGA CACGGTGGCAAGAAGCAGC GGTT GCTG-TT-TCACCACCGTG  TTTTTTATTGCCGTT  72 61
LQF52_RS11990 2682067 .. 2682081 -  -3.5  -4.66163   ATGTCGATCTAAAAA               CGCTG TACGC CAACG               CGGACGTCATCTCCC  69 460
LQF52_RS11970 NONE
LQF52_RS11965 2674267 .. 2674293 -  -6.5  -3.58037   CAGGAAGCCCTGAAA         CTGTCCGACGA GCTGA TCGCCGAACTG         CAAGCACATGACGTT  60 423
        hrpA 2669564 .. 2669574 -  -5.4  -3.36175   AAGCGTCAGCCAGAA                 TGAG CAC CTCA                 CAGGCAGGGAAAACG  53 300
LQF52_RS11915 2660731 .. 2660742 -  -4.4  -3.41982   AAACGCACCAACGAA                CGAA TTTA TTCG                 GCCAATTTTCATTAT  52 180
LQF52_RS11910 2660046 .. 2660068 -  -7.6  -3.55444   CGCTCAGGCTGCAAA           CGTCGCTGGC CTA GCCATTGACG           CTCCCGCCACTCGCT  65 66
LQF52_RS11890 2657404 .. 2657421 -  -2.7  -3.60627   TCAGCGTAGCGGAAA             CAGAATA GAAA TAGTCTG              CGGGCCACGCCGTGC  50 40
LQF52_RS11870 2651690 .. 2651709 -  -2.2  -3.72893   TACCTGTTCAGCAAA            TCGGTTGAA GCC TTCA-CCAA            CGGTGAATTGGGTCG  50 290
LQF52_RS11845 2644548 .. 2644578 - -16.2  -3.54543   AGGGATGCGGCGAAA       GCTTGCGCCACGTC GGG AACGTGTCGCAAGC       GATCCGCAAAGTCCG 100 238
LQF52_RS11840 NONE
        narH NONE
        narJ NONE
        narI 2636950 .. 2636963 -  -5.9  -3.36515   GGTCAGGCGTAAACA               CCGCA ACGT CGCGG                CCGTGGCGCAGGCGT  56 456
LQF52_RS11810 2634202 .. 2634215 -  -2.3   -2.7035   GGTATTCAGACATGA               CCCAG TTCC CTGTG                TTGTGACAGACTCAG  40 90
LQF52_RS11805 2633723 .. 2633743 -  -5.3  -2.76696   TTCCGCGTCAATAAC            CCGTTCGGC TCA GCCTAACGT            CGGCTCGCAGTTCAC  49 14
LQF52_RS11785 2629546 .. 2629563 -  -6.3  -3.64599   TCAGTACACCTGAAA             GAAGTCCC TGT GGG-CTTC             TTTCATCAACGTGCA  62 81
LQF52_RS11775 2627522 .. 2627545 - -16.8  -2.66522   ACGCAACAGAAGGTA          CGTTGCCCCT GAAC AGGGGCAACG           GATACAAAATTAATC 100 35
LQF52_RS11730 NONE
LQF52_RS11725 NONE
LQF52_RS11720 2615951 .. 2615963 -  -4.1  -3.41527   GAACGGTGATGAGAA                GCATC AGG GATAC                ACGACCTCACTCTCC  50 16
LQF52_RS11715 NONE
LQF52_RS11710 NONE
LQF52_RS11705 2612137 .. 2612154 -  -5.6  -5.40072   TGGGTTTTAAAAAAA             GCTGAA GAAATT TTCAGC              AAAAACCAGTCTTTT  87 387
LQF52_RS11700 NONE
LQF52_RS11695 NONE
LQF52_RS11690 2608769 .. 2608823 -  -4.2   -4.2828   GGTCACGCAGCAAAA CGC-CGCGCTGGTGAACGAAGCCGCCG CGGC CGCCGG-TTCGCTGTCC-GAGCGTGCG GGTGAACTCAGCCAT  66 108
LQF52_RS11675 2604698 .. 2604708 -  -6.8  -3.60631   CAACAAACATCACAA                 GCTC TCA GAGC                 GCGATGACTTTATCT  64 9
LQF52_RS11670 2603257 .. 2603268 -  -4.4  -2.66602   TCACCGAATAACTCA                GTCA TTGA TGAC                 CTCCACCCCAAAGGT  46 11
LQF52_RS11665 NONE
        menC 2601251 .. 2601266 -  -2.5   -2.9518   GTTAAGATCGAGATA              CCG-GG AGCGA CCACGG              TGCGAGGCATCCCTG  42 207
LQF52_RS11655 2600253 .. 2600303 - -20.8  -4.36914   TTTTGTCCCATAAAA GAATGCCCGATATTACTATGGTAA TAA CTACCATAGTAATATCGGGCAATA GCGTCAACCGATTCG 100 49
LQF52_RS11650 NONE
LQF52_RS11645 2599489 .. 2599509 - -12.5  -4.39571   TGTATAAACGCAAAA            GTGGCCGTC TTT GGCGGCCAC            TGAACATAATTAAAA 100 62
LQF52_RS11635 2596675 .. 2596687 -  -3.3  -4.61231   GCACAGGCGCAAAAA                GCGGA CAT TCCGG                TGATTCGTTTCATCT  67 296
LQF52_RS11575 2585348 .. 2585358 -  -4.6  -4.51743   CCATCATTAAATAAA                 GCGG TCA CCAC                 CTCAGTCAGTGAAAA  69 82
LQF52_RS11570 NONE
LQF52_RS11565 2582965 .. 2582988 -  -9.6   -4.2679   TAAGCTTCAGCAAAA          GGGATTCACC GACT GTTGAATCCC           TTTTATCTGTTGTTT  84 63
LQF52_RS11560 2581257 .. 2581275 -  -7.5  -3.18849   TCGATATGATCAAGA             TCGACAA GATTT TTGTCGA             CGCCATCGGCACAGA  59 322
LQF52_RS11550 2579347 .. 2579365 -   -16  -4.96501   CGGGATAAAAATAAA             GCCGGAGC AAG GCTCCGGC             TCGTTACATCACGAT 100 40
LQF52_RS11545 NONE
        sctJ NONE
LQF52_RS11535 NONE
        sctL NONE
LQF52_RS11525 NONE
LQF52_RS11520 NONE
        sctC NONE
LQF52_RS11510 NONE
LQF52_RS11505 2573381 .. 2573395 -  -2.1  -2.83899   AATGGGTTATGAAAG              CGC-CA ATGA TGTGCG               GTCAGCCCGCGTGAT  41 121
LQF52_RS11500 2571875 .. 2571902 - -12.8  -3.67068   AGCAAAATGCTTAAA        CTGTGGTCTGAG TCTG CTCACACCACAG         TTCATGTTGATAAAG  95 399
LQF52_RS11495 NONE
LQF52_RS11490 NONE
LQF52_RS11485 NONE
LQF52_RS11480 2566213 .. 2566241 - -11.1  -3.37091   AGTGCCAAAAGGCAA        CGCAACAGACC CTCGTCC AGTCTGTTGCG        TAGTGACATCGTGTT  80 39
LQF52_RS11475 NONE
LQF52_RS11470 2565022 .. 2565046 -  -7.8  -4.21194   CCGCATCAGGGAAAA         GCCAGC-CTGG GAAA CCTGTGCTGGC          TTTATTGCTCCATTG  76 73
LQF52_RS11455 NONE
LQF52_RS11450 2557343 .. 2557362 - -12.2  -2.65007   GATTGAAGAGAATAT            TCGCCAGA ATCG TCTGGCGA             TTGACGAGAAAAATC  72 342
LQF52_RS11440 2555854 .. 2555875 -  -3.7  -4.16205   TACAATGAAATTAAA           GGTGAGC GCTTATCT ACTCACC            GAATGTAATAATACA  62 74
LQF52_RS11435 2554175 .. 2554201 - -12.3  -3.11634   TTTTACAGGATGCAA         TGCCGGCCACG ACTAA CGTGACCAGCA         TGAAGTAACGCAATA  83 51
LQF52_RS11415 2547668 .. 2547678 -  -2.4  -2.91438   AACGATTACAATAAG                 GCGG AAA CCGA                 GCGGACTAAAGACAA  41 318
LQF52_RS11405 2546548 .. 2546576 - -15.3  -3.99236   TGCACAAAAAAGGAA        CAACCGTGCGCCA TCG CGGAGCACGGTTG        AAAAAAAGAGTGGGT 100 66
        atzF NONE
         uca NONE
LQF52_RS11390 NONE
        urtA 2538895 .. 2538905 -  -6.8  -3.22618   CCGCCATATAAGAGA                 GGGA GTA TCCC                 CGTCCGATATGCTGG  59 63
        urtB NONE
        urtC NONE
        urtD NONE
        urtE NONE
LQF52_RS11360 2533983 .. 2534004 - -10.3  -3.11088   AACGCACTCAAGACA           CACATATGA TAAT TCATATGTG            TTAGCTTTGAAATCA  73 102
LQF52_RS11355 NONE
LQF52_RS11350 NONE
        arsC 2531809 .. 2531821 -  -6.3  -4.06384   TCTCAACACGACAAA                CCATT CTC AATGG                TAAAGGCTGAAACAC  68 67
LQF52_RS11305 NONE
LQF52_RS11300 2524158 .. 2524176 - -13.8  -3.29511   GTGACGCTGGCATAA             GCCGCCCC TTA AGGGCGGC             ATTTTTTTGTCGCCA 100 173
LQF52_RS11280 2520878 .. 2520891 -  -8.1  -4.14511   AATTCCACGTTAAAA               GGGCA TTAC TGCCC                TTTTTTTATGTCCGT  74 17
LQF52_RS11240 2512328 .. 2512359 - -10.9  -4.99043   GTTCTACAAATAAAA      TCACCTCCGCACGA TCAAT TCG-GCGGAGGTGT      GTTGATTACATTAAT 100 69
LQF52_RS11230 2509806 .. 2509817 -  -7.2   -2.8552   GGTTACCGATCAAAC                GGCG GCAC CGCC                 TTGTCATCGCTCACG  59 44
LQF52_RS11225 2509173 .. 2509183 -  -6.8  -5.00616   TTTTGTCTGAAAAAA                 CACC GCT GGTG                 CGCCACTGACAATGG  82 92
LQF52_RS11220 2508771 .. 2508815 - -11.6  -5.54338   TAATGAAAATAAAAA GGCAACCTACGCACCGAAAAC GATC GTTTACAGTACGT-GATTGCC CATTTTTATCCGCTT 100 50
LQF52_RS11215 NONE
LQF52_RS11210 2507388 .. 2507402 -  -4.2  -3.35813   CGTTACCCTAATTAA               TGCTGC ATT GAAGCA               TTTTACGTAAGTCTG  50 447
LQF52_RS11205 NONE
LQF52_RS11200 NONE
LQF52_RS11195 NONE
LQF52_RS11190 NONE
LQF52_RS11185 NONE
LQF52_RS11180 2499851 .. 2499865 -    -5  -3.57792   GGACTGAGCCTGAAA               GCTGAA AGT TTCAAC               CAGTGCGTGTCGGCA  57 245
        ascF NONE
LQF52_RS11160 2495169 .. 2495198 -  -9.9  -5.40474   ATTTTTGGAAAAAAA       TAGCCCCCAAACG TTTC CGTCAGGGGGCTG        TAGCAGGAATCGCTA 100 57
        hisN NONE
LQF52_RS11150 2493743 .. 2493756 -  -3.1  -2.78463   AGTTTGTGCAGCATA               CGAAA GGGA TTCCG                AATCAGTCTGACGTT  43 28
LQF52_RS11145 2493339 .. 2493354 -    -6  -3.06696   GTTTGGTCTAATACA              GCGCGC CCCA GCGCGG               AAGTGTGGTAAACGG  56 2
        zigA 2491494 .. 2491517 -   -11  -3.91897   TGGGCGACCGATAAA          GCGCGTTCAC TGCT GCGAACGCAC           GAGCCGTTCGTGTGG  82 447
LQF52_RS11125 2488538 .. 2488557 -  -9.3  -5.40072   TTTGGTGCAAAAAAA            GCGAAGG TGTTCG CCTTCGC             TCAGAAATGTTGATG 100 95
LQF52_RS11120 2487148 .. 2487160 -  -6.3  -3.96327   ATGGCCGATTACAAA                TCATC CTT GATGA                CTTCACTCAAAATAG  65 182
LQF52_RS11110 2484695 .. 2484707 -  -3.3  -3.29549   ATTAATACAACCGAA                TGGTG AAA CCCCA                CACTATGTCTGCTGT  48 28
        ychH 2480492 .. 2480514 -   -12  -6.07374   ATAAAAAACAAAAAA           CCGCCATAGC GAG GCTACAGCGG           CTCTATTGTTCAATG 100 68
        hemA 2476312 .. 2476322 -  -3.2  -2.60238   ATAGTAGAGATGAAT                 GCTA GTC CAGC                 CCAAGGCTGTCACGT  42 16
        prfA NONE
        prmC NONE
LQF52_RS11055 NONE
       sirB1 2473073 .. 2473085 -  -2.7  -3.24488   TGTCGGGAAATAAAT                TAACG TAG CATTA                CTGCAAAACGGTTTC  45 60
        kdsA 2472136 .. 2472151 - -11.8  -4.84918   GTTATAAACACAAAA              CCCGCG ATAT CGCGGG               TTTTTTACGTCAGTA 100 64
        pntA NONE
        pntB 2467584 .. 2467599 - -11.8   -5.1287   TTGAGATGTAAAAAA              GGGGCG ATTT CGCCCC               TTTCGTTTTCTACTT 100 51
LQF52_RS11010 NONE
LQF52_RS11005 2461044 .. 2461064 -  -3.2  -3.62522   GAACCTGCCGAACAA            GACGGCAA ACCGG TTCCCGCC            CTGGCAGCGGGCGGC  51 360
LQF52_RS10950 2447402 .. 2447427 - -14.1  -5.59564   ATAAATGTAAAAAAA         GGCTTACCGAGC GAC GC-CGGTAAGCC         TTTTTATCAACATCA 100 105
LQF52_RS10945 2446743 .. 2446772 - -17.2  -5.88565   TTTATAACAAAAAAA       GCCGCCAGTGAG TGCGAT CCCACTGGCGGC        TTATGGTAAACGAAA 100 47
LQF52_RS10940 2446023 .. 2446040 -  -8.5  -3.54408   CTTTATTTAAATTAA             TTCGTAC ATAC GTACGAA              TAACTATCGCACGAA  71 119
LQF52_RS10935 2444757 .. 2444793 -   -11  -3.07522   ATAGTGTGGAAGACA   CTACGCGGTTCCAGT AACACGAA AC-GGAACCGCGCAG    AAACTTCAGGATGGG  76 31
LQF52_RS10930 2444044 .. 2444058 -  -2.8  -3.35992   ACTTAGCGTAATCAA               CATTCC GTT GCAATG               AGCTCCTACTATTTG  46 140
LQF52_RS10925 2441993 .. 2442020 - -14.2  -3.32233   GAAGGAGTAAATATA        TACTCGGCAACC TTTC GGTTGCCGAGTG         ACGCCGTCACTTTTT 100 39
LQF52_RS10920 2440738 .. 2440749 -  -3.6    -5.626   CAGGCGAGAAAAAAA                CAGG ACCG CCCG                 CTGACCAACTCTGAG  91 239
LQF52_RS10910 2440127 .. 2440147 -  -4.7  -3.99985   CAGACATCGAAATAA            GACACTTAC TTC GGAAATGTC            TTGCATACATTGAAT  59 44
LQF52_RS10905 2439155 .. 2439165 -  -5.4   -3.1811   CGCTCCAGAAGAAAT                 CAAG GCG CTTG                 CGGACAACCTTAGTG  52 334
LQF52_RS10895 NONE
LQF52_RS10890 2436545 .. 2436571 -  -6.7  -3.11687   GCAATTATTATTTAA        GCGCTTGATTCA GGCG TGAATCA-GCAC         CAGAGGAAGGGGCAG  58 65
LQF52_RS10875 NONE
LQF52_RS10870 2432592 .. 2432618 - -10.3  -5.57396   ATAAGCAATAAAAAA        GCCGATAAC-CT GTTA AGAGTTATCGGC         TTTTCACCATGCGGT 100 53
LQF52_RS10860 NONE
LQF52_RS10855 NONE
LQF52_RS10850 NONE
LQF52_RS10845 2427888 .. 2427922 -  -8.8  -2.94144   TGCTTATGCAAAGGA    GCGATCATGACGCAT GCAATG ATGCATCATGAT-GC     GTTTGCCCTATGAGA  65 64
LQF52_RS10835 2426404 .. 2426424 - -14.7  -2.76696   CGGTTTGGGAAGAAT            CGCCCCTCA GAA CGAGGGGCG            GATATCGAGCCATAG  89 68
        ydfG 2425463 .. 2425486 - -11.1  -4.66537   TTGTCCAATAGAAAA          GGGCATGAA ACAGCG TTCATGCCC           TTAATTTTTGTGTTT  95 50
LQF52_RS10825 NONE
LQF52_RS10820 2423399 .. 2423427 - -18.9  -4.93696   TCCAAAGAGGAAAAA        CACCCTGCCAGCG AGC CGCTTGCAGGGTG        AGAGACTATGACCTT 100 60
LQF52_RS10815 2422806 .. 2422825 -   -15  -3.79203   AGAGAAAAGGGGAAA            CCCACGCC AGAA GGCGTGGG             TGAAAAATCAGGGGG 100 33
LQF52_RS10810 2422006 .. 2422028 - -15.6  -3.61889   GAAAAAGCCGCGAAA           CCCGGCCATC AGT GATGGCCGGA           GAAAGCTAAACGCAG 100 31
LQF52_RS10805 2421582 .. 2421595 -  -9.5  -5.10163   AACGGCAAAAGAAAA               GGCGC GAAA GCGCC                TTTTGAACATCTATG  93 61
LQF52_RS10780 2415454 .. 2415491 - -10.7  -2.65808   AGGGGTAAGAAGGTA   CGACTCGGAGTTTACCTG ATT CAGGCAAACTCCG-GTAA   GAAAGGGGTTTAAAG  74 35
         tus 2414230 .. 2414254 -  -2.6  -4.09551   AAAGCGCACAAAGAA          GGGCTGACGC TGAAG GCGGCTGCGC          TCAAACTGAACTATC  56 169
        manA 2411462 .. 2411480 -  -7.4  -5.52384   CCTTTAGTAAAAAAA             TGCGCGTT TTC AACGCGAA             ACGCTGGCAGCTTAC 100 70
LQF52_RS10760 2409822 .. 2409845 - -13.8   -4.7373   GTAGGGCAGGAAAAA          CGGTGGCGGC AAGT GCGGCCACCG           TGTGTGTTAGCACGT 100 57
LQF52_RS10755 2408742 .. 2408754 -  -4.1   -3.3579   AAATCGTGGTAAATA                GCCAA CGG TTAGC                GCCGAAACTCAGCCA  50 72
         add 2407619 .. 2407638 - -12.2  -2.56475   CAATTGCATATCAAG            CGGCTAAC AAAA GTTAGCCG             TTTTTTATGGCTTGG  79 50
LQF52_RS10710 NONE
        araA 2396114 .. 2396158 - -10.8  -3.86897   GCGAGTGCCTATAAA GAGGCAGATTGTTCACGGAC GATTA ATCCATAGACAACCTGCCCC CTGAGAGCGGACTTA  86 38
        ydgT 2395659 .. 2395669 -  -2.6  -3.90588   TATCCCGGAAGTAAA                 TTAT TGC ATAA                 CTATGCTTTTTATTG  54 48
        rsxA 2394900 .. 2394918 -  -4.6  -3.44527   TAGCGATCATCAGAA             TTTCACCA ATC CGGTAAAA             CCCATAAACGCCAGC  54 1
        rsxB NONE
        rsxC NONE
        rsxD NONE
        rsxG NONE
LQF52_RS10670 NONE
         nth 2389007 .. 2389024 - -11.3  -3.70947   GATAACAGAAAGGAA             GGTCTGG CGCT CCAGACC              ACAGCAGATTAGGCG  87 34
        dtpA 2386742 .. 2386758 - -12.3   -5.1848   AACCAACGTAAAAAA              GCCAGAC AGT GTCTGGC              TTTTTGTCATTTGGC 100 105
LQF52_RS10645 2382086 .. 2382105 - -10.7  -3.93288   CCGTACGTAATCAAA            TGCCCGC GAATTT GCGGGCA             TTTGCATTTAATCGA  86 33
LQF52_RS10635 NONE
        cobO 2379276 .. 2379288 -  -4.1  -3.80855   TTTTGCAAAAACTAA                CGACT ACC AGTCA                ATACCTTGCTGTGCC  55 16
LQF52_RS10610 NONE
LQF52_RS10605 2373974 .. 2373986 -    -2  -3.21276   CCGGGTCTTAGAAGA                TTCT TGCGT AGAA                GACAGTTGCATAATC  44 51
        trpD NONE
       trpCF NONE
        trpB NONE
        trpA 2369485 .. 2369541 - -13.3   -3.6292   AGAAATATTTTGAAA CACTATT-AGGCGCGCGA-TAGAACTT GCGTT AAGCCCCAATCGCGCGCCTGAAAAGTG TTATGAACGCGTAGC 100 26
LQF52_RS10580 2368336 .. 2368358 - -10.6  -5.87996   CAACGAATAAAAAAA           CGGCGAAG TAAATAG CTTCGCCG           TTTTTATAGACAGGA 100 104
LQF52_RS10570 2366523 .. 2366541 -   -11  -2.52543   ATCTGGCGGAACTTA             TGCCACCA AAG CGGTGGCA             TAAGCAAAGGGCGGT  74 43
LQF52_RS10565 NONE
        yciA 2365249 .. 2365278 - -18.7  -4.94262   GATATGAAAAAGAAA       CGGGGCGTCATCT TTGC AGATAACGCCCCG        TTTTCGTTATGTCTT 100 95
LQF52_RS10550 2363862 .. 2363890 -  -3.2  -2.78679   GGCGGGGAGGTAAAG        GGCCATGATT TTCTGGTGC AACCATGACC        TGTATCAATTGAACC  43 42
LQF52_RS10545 2362041 .. 2362064 -   -11  -4.28548   AGCCAGTGAGGAAAA          TAGCGACCCG AGGT CTGGTCGCTA           TTTTTTTATCACACC  88 63
         cls NONE
LQF52_RS10530 2359655 .. 2359676 - -15.9  -5.09895   GACTGATGTAAAAAA           GGCGTCTCC TGCG GGAGACGCC            TTACGTTTAAGCGAG 100 46
        adhE 2348437 .. 2348461 - -14.4  -5.15167   TACGAGTAATAAAAA          TGCCCAACCT TAAAG AGGTTGGGCA          TCATTGAGAGATAAA 100 75
         hns 2346910 .. 2346929 - -13.6  -5.33405   GTTACCAAAGAAAAA            CCCCCGAT AACT ATCGGGGG             TTTTTTCGTATTCAG 100 54
LQF52_RS10465 2343028 .. 2343040 -  -6.2  -3.75105   GTAACGCAGCAATAA                CGCC GCGTG GGCG                ACTGCCTGTGTTCTA  64 38
        purU 2342058 .. 2342068 -  -2.4   -3.5493   ATATCAAAAATAAAT                 GCGG TTG CCGT                 TTTTTTATTCCGTTC  47 78
LQF52_RS10455 NONE
LQF52_RS10450 2341332 .. 2341349 -    -2  -5.00884   ATGGTGCTGAAAAAA             GA-GCTG TACGC CAGCGTC             TCACTTTTAGTCGCA  74 385
        xthA 2339581 .. 2339605 -  -8.6   -2.7728   TGCAAATTTTAATCA          CCGCTGTG GCTTGGATG CACAGCGG          TGATGTTATTTTCAC  64 83
        sppA 2334348 .. 2334390 -  -8.8  -4.72846   TTATAGAGGGAAAAA TAGCCCGGTAATACTATCAT AAGCA ATGAC--TATTACCGGGCTA TACCCGTCATACTTC  89 172
        ansA NONE
        pncA 2332236 .. 2332246 -  -6.8  -4.06491   TGAACGCTACACAAA                 CTGG AAT CCAG                 TAATAATAAATCTGA  70 396
        gapA 2330350 .. 2330368 - -12.4  -5.66229   ATTAACAATAAAAAA             GGGCGACA TCA CGTCGCCC             TTTTTTCACAGAATC 100 52
LQF52_RS10390 2329366 .. 2329394 -   -14  -3.32536   AAAGCATTTGCAGAA       GAGGTGTATGGCG GTTT CGCCATACACC-C        ATATAGCTACGTTAT 100 49
        yeaG 2325169 .. 2325182 -  -4.5  -3.53224   CATGTTTCCCCCAAA               CGCTG TTGC CAGCA                TCGTGCGTCATTATG  54 36
LQF52_RS10370 2323830 .. 2323870 - -13.5  -4.64844   CCCAGAGAGAGAAAA  TCAGCCAGCTAACTATTAA TCA TTAACAGATAACTGGCCGA  CTGAGAGGGAGTTAA 100 37
LQF52_RS10365 2323275 .. 2323308 -  -3.8  -3.24032   AGGCGGTAATCAACA     GGGCGGAGCGTCGTC AGACA GA-AATTCTCCGCCC     TTTAGTCAATTGTGC  48 50
LQF52_RS10360 2321557 .. 2321568 -  -3.6  -3.85911   GAAACCTATAAAATA                GCGA TTAC CCGC                 TTTGATCGTCGCATC  56 393
LQF52_RS10350 NONE
LQF52_RS10345 NONE
LQF52_RS10340 NONE
LQF52_RS10335 NONE
LQF52_RS10330 NONE
LQF52_RS10325 NONE
LQF52_RS10320 2315272 .. 2315291 - -11.4  -2.82327   TGCTGATAGGGAAAT            GCGCTCCC CGAA GAGAGCGC             GAAAGACCGTTTGGG  77 41
LQF52_RS10315 2313441 .. 2313468 - -15.7  -4.11216   GTTTCATTGTGAAAA        GGGGATTCAGG TTGTTG CCTGAATCCCC         TTTGTCTTTGGTCAT 100 67
        nhaB 2310720 .. 2310747 -  -7.1  -2.99609   AACATGATTAAAGCA        GCAGTGTAAACC GTTCT GGCTT-CACTGC        CATCATTTCACTGCG  60 160
        dsbB 2310125 .. 2310142 - -12.7  -3.44608   AAACAGTTACCAGAA             GCCCGAC TCTC GTCGGGC              TTTTCGGGTAATAAT  93 40
        mgtS 2309246 .. 2309272 -  -7.2  -4.25104   TCTGCGGTACTAAAA         CGGCAATGCACC GTG AGCGCATCTCCG         TGCGTCATATCGCCG  77 224
        minC NONE
        minD NONE
        minE 2305447 .. 2305476 -   -13  -3.07043   TGTATGACGGGAATA       GATATCCCCTAC GTAAAA GCAGGGGATATC        ACAGCAGAAAAATCA  86 38
LQF52_RS10230 2297849 .. 2297875 - -10.8  -3.63991   GATGATGGTGAAGAA         GAGGAAGAGCAG TAA CCGCGCCTCCTC         TGTAAGACGATAGCT  83 40
        pabB NONE
LQF52_RS10215 2295425 .. 2295441 -  -7.2  -3.65199   AAGTGGTGAGCTAAA              CGCCGC TGAAC GCGGCA              TTGAGCTTAGGGCCT  67 32
        sdaA 2293591 .. 2293619 - -13.1  -4.14511   AAGTCGATTGCAAAA        TGAAGCCCCGCCA ATT TGGCGGGGCTTTT        TCATAGATGGAAATA 100 94
        manX 2290444 .. 2290480 - -15.3  -2.62983   TTGATGGTGACATTA    GCGTTAATACCCTTCGT AGC ACGATAGGTATCAACGC    GGCATTTTGTTAATC  93 19
LQF52_RS10195 NONE
LQF52_RS10190 2288631 .. 2288656 -   -14  -5.24129   GTCCGTCATAAAAAA         TGGCCGGGCG TATTGG CACCCGGCCA          TTGAACATTACACGC 100 33
LQF52_RS10185 2287747 .. 2287799 -  -5.8  -3.21099   CGGCTGGACGATTAA CCATATACACGCA-GATCATC-CCCA ACC CGAATGACGATCTTACGTGTCTATGG TCTCGCCTGCCAATC  54 370
        mntP 2287100 .. 2287126 - -12.2  -5.68489   GAGAAGAATAAAAAA         CGGGCAGCGCGA GAG TTGGGCTGCCCG         TTGATGTGAAATGTG 100 46
LQF52_RS10160 NONE
LQF52_RS10155 NONE
LQF52_RS10150 NONE
LQF52_RS10145 2281251 .. 2281284 -    -9  -3.19449   GAAATAGCGCATTAA     TGACGTAACCGA CGGCTGTTTT CCGGTTACGTCA      TGCTAAAAGGCTGAG  70 51
LQF52_RS10140 2280096 .. 2280125 - -14.4  -3.15544   TGCCAGTCTGATTAA       CG-GTCTGGCGCA GCCGT TGCGCCAGACGCG       GTATTCTTTTCACCT  95 78
        hxpB 2278599 .. 2278626 - -13.4  -3.57561   CTGTAATGCTTCAAA        GCGTGGTCAGCC AGTA GACTGGCCACGC         TTTCGTCATATCCCA 100 90
        kduD 2276819 .. 2276848 - -11.7  -4.88293   AACTTGAAAAACAAA       TAAAAAGCACAAC CGGA ATTGTGCTTTTTA        TCGTAGGTTGGCGAA 100 63
LQF52_RS10110 NONE
LQF52_RS10105 NONE
LQF52_RS10100 NONE
LQF52_RS10095 NONE
LQF52_RS10090 2270643 .. 2270666 - -13.9  -5.01042   AATTTAAATGAAAAA          TCCCTGCCG TCAGTG CGGCAGGGA           TGAATTACAGCTTAA 100 54
LQF52_RS10085 2269439 .. 2269477 -  -3.8   -5.0538   GGCGATGGTAAAAAA   TAGGGTAGCCATCACATC GGA GAAAAAATGACTACCCTG   AACCGCAAACTTTAA  76 279
LQF52_RS10080 2268388 .. 2268398 -  -3.2  -3.49777   TTTTATACAGTATAA                 GAGA TTA TCCC                 TGCCTGCGGAAGCGG  50 56
LQF52_RS10075 NONE
LQF52_RS10070 2266153 .. 2266186 - -21.9  -3.85817   ACGGCCCGTCATAAA     GAAAACGCCGACAGC ATCA GCCGTCGGCGTTTTC      TTTTGTGCAGCAAGC 100 46
        nadE 2264659 .. 2264690 - -15.2  -5.10877   AGAAGAAACCAAAAA      CAAACCAGACGCCG TTAT CTGCGTCCGGTTTG       CTCATCACGATGATT 100 40
        yddG 2263710 .. 2263721 -  -5.8  -4.37534   AAATCCAGACGAAAA                CCGT GGGG ACGG                 CTGGGGATCAACTTG  70 33
LQF52_RS10050 2261846 .. 2261864 - -12.4  -4.98522   AAGCGGAGAGAAAAA             GGCGAGGA GAA CCCTCGCC             GAGGGAGATCGCAAT 100 40
LQF52_RS10045 2261272 .. 2261287 - -11.8  -4.67755   AGAGTCACCCAAAAA              GGCCGC GCAA GCGGCC               TTTTCCTATCTTATT 100 55
LQF52_RS09940 2237499 .. 2237516 - -12.7  -5.76949   GAGGGGCAAAAAAAA             TCCCGCC ACAG GGCGGGA              AAGGAACAACATAGA 100 302
LQF52_RS09935 2236695 .. 2236720 - -12.7   -5.4492   GAGAGATATAAAAAA         GAATGGATACG CAAA CGTACCCATTC          TATTAATTACCAGAC 100 246
LQF52_RS09930 2235346 .. 2235362 - -13.7  -3.16202   CGCAGATGAAAATCA              GGGGCCA ATT TGGCCCC              TTTTTCTTTATGGAT  93 33
        rluE NONE
LQF52_RS09915 2232876 .. 2232892 -  -2.1  -3.08201   CAAGATGCCTAAAAT              GGCCAGT TAA ACGCGCC              CAATACGGTTAACGG  42 2
        mnmA NONE
        hflD 2230979 .. 2230993 -  -5.7  -3.40052   ATAGCGGCAAGAATA               CCATC AAACG GATGG               GCAACGCGCCAATAT  56 14
        purB 2229430 .. 2229452 - -11.2  -4.18018   TGGTCTTATGCAAAA           CTGGCGTGCA GGG CGCCCGCCAG           AGAGAGATTGCGATC  93 55
        phoP NONE
        phoQ 2227071 .. 2227085 -  -2.1  -2.96274   TTGGCGATAAGTATA              GCG-GA AGCA TCGCGC               GCTGTACTGCCTTTC  41 39
LQF52_RS09885 2225789 .. 2225811 - -16.4  -3.32022   TTTTGCAGAGACGAA           TAAGGCGGGA TAT TCCCGCCTTA           TCTTTGTAACCAGTA 100 54
        potA NONE
        potB NONE
        potC 2221403 .. 2221414 -  -4.4  -5.24989   GCAGATATGAAAAAA                CGAT ATTT ATCG                 TGCTTGCCGCCACCT  80 40
        potD 2220091 .. 2220112 - -11.6  -5.58454   TCGATATGAAAAAAA           CGGCTTCC GATAAG GGAAGCCG            CCGTGAGAAAGCCGA 100 65
LQF52_RS09855 2219285 .. 2219298 -  -3.9  -3.79906   CCATTCTTATAACAA               GTTAT TATC ATAAC                TTATTGTTATCACAA  55 35
LQF52_RS09850 2218284 .. 2218313 -  -9.2  -3.24925   ATCTGAGATCATCAA       GCGCCTTGTGGG GTTTAT CCAACAGGGCGC        TTTTTTTTGAACCTG  70 109
        yebS NONE
LQF52_RS09825 2210614 .. 2210641 -   -12  -4.09864   AGCGACGCGTGAAAA        CGACAGGGCAAC GATC GCTGCCCTGTCC         GGTGGTGAGGTTAAT  93 36
        rsmF 2209005 .. 2209048 -  -3.8  -2.68802   GAGGAAAGGGAGAAT GGGTGGTTCATCAGGTGG TTTTATCG CCACCTGATGCAGAAACC GCATTTATTCTTTAG  44 30
LQF52_RS09815 NONE
LQF52_RS09800 2206160 .. 2206185 - -11.9   -2.5076   AATCAGGATTAATAG         GTTGGCGACAG GTTT CTGTCGCCAAT          GTACAACGAAAGATT  79 39
LQF52_RS09775 2202791 .. 2202802 -  -7.2  -3.62572   GATTATGAGGGTAAA                CCCG TCTT CGGG                 TTTACCCTATCAGCA  67 343
        purT 2199301 .. 2199321 - -12.6  -4.06904   TGATTGAATGACAAA            GGCCACTC ACTGA GAGTGGCC            TTTTTTGTATCAGCC 100 35
LQF52_RS09750 2195528 .. 2195550 -    -2   -2.7782   TAAGCGTCGAATAAC           GGTGCAAAAT GTC ACTTTACAAC           AAAACTATTTCACCT  40 208
         pyk 2193954 .. 2193975 - -15.9   -5.4251   CGCATAGATAAAAAA           GCCGGACGA GAAA TCGTCCGGC            TTTTTGCTGGTATGA 100 81
        znuC NONE
        znuB 2188706 .. 2188734 - -11.8  -4.07568   GTGCCGTCTTCAAAA        GCCCTTCTGAAT CACGT ATTCGGAAGGGC        TTTTTGCTATTGAGA  93 67
LQF52_RS09710 2185764 .. 2185774 -    -4  -3.17392   CATCTTCTAATGTAA                 TCAT CAT ATGA                 CCTATTTTTATGTGA  48 185
LQF52_RS09705 2185332 .. 2185383 -  -6.6    -3.885   ATTTTCAGACAATAA CCATCTCGCTCTGATTGGCGTG AATAATGG CACGGCACTCAGAACAAGGTGA TTGTTATTTTTTTAA  68 104
LQF52_RS09700 2183657 .. 2183667 -  -2.4  -2.71325   TCATCGATAAATTCA                 TGGG CGG CCCC                 GTCGGGCTGGACAAT  39 273
LQF52_RS09665 2176770 .. 2176780 -  -5.4  -3.14132   TGTCGTCGCCATCAA                 TCGA ATG TCGA                 CGATTATCGCGTAAT  54 76
LQF52_RS09660 NONE
LQF52_RS09655 2175114 .. 2175128 -  -7.8  -3.56568   CAAGCAGCGTTCAAA               CCTGCC TCT GGCAGA               TTTGTCAGTCACCCG  67 286
        cmoA NONE
        cmoB 2173198 .. 2173218 -   -14  -3.27774   CATGGCAAGTACCAA            GCCCCAGC GTGTT GCTGGGGC            TTTTTTTGTCTAACG 100 48
        argS 2169033 .. 2169057 - -14.4  -5.60993   TTCGTCATAAAAAAA          CGCCATTGGT TTGTC ACCAATGGCG          TTTTTGCTTTCAATC 100 73
        mdtH 2163343 .. 2163357 -  -8.5  -4.13246   TAGGGTATAGACAAA               GGCCG TTGTG CGGCC               CAGCGTGTAACCCAT  78 160
        grxB 2162529 .. 2162540 -    -3  -4.25283   AGCGGCGGAGTAAAA                CTAA ACGG TTAG                 ATTGCCAGACTGCTG  58 22
LQF52_RS09595 2161599 .. 2161647 -  -3.1  -2.65279   GAAGGTGGAAAGCCA CGCCACCACCGCATTTTATCGC ACACTG GCGATAGTATGCCGCGA-AGCG CTGGAAGCCATGCGG  40 149
LQF52_RS09580 2159920 .. 2159967 - -26.8  -2.71144   CATCCGTTCCAACGA TATAAAAGAAAACGCCCCTGAC TTGC GTCAAGGGCGTTTTCTTTTATA TGGCGGTGAGGAAGG 100 26
LQF52_RS22195 2157755 .. 2157776 - -11.5  -3.14468   TGTCATTAGAGGGAA           CGCCTCCGC TTTT GCGGAGGCT            TTTGTTTTTTAGGGG  81 41
LQF52_RS09540 2148258 .. 2148282 -  -8.6  -2.58667   CGCCATAAAAATCAT         GCACGACAGGC TAAT GCCTGCCGT-C          GTTCAGAATAGAGCT  56 145
        pncB 2142009 .. 2142025 -  -6.5  -3.76413   GGTTAAAACGTCAAA              TGGCCCA ATC CGAGCCA              TTTGCTATGTTACTT  64 144
        asnS 2140480 .. 2140520 - -13.5  -5.20333   GAGGCATAACAAAAA  TTAAAAAAAAAGAGCCGGG AAA CCCGACTCTTCTTTTCTAC  ATATTTGTTTTACTT 100 56
LQF52_RS09510 2139104 .. 2139123 - -12.2   -5.4505   GCTCGCAATAAAAAA            GACAGAGC CGAG GCTCTGTC             TTTTCATGCAATACG 100 69
LQF52_RS09505 2137625 .. 2137643 -   -11  -5.07011   GACAGAAATGAAAAA             GCCGACAC AGG GTGTCGAC             TTTTTTGATCGCAGA 100 45
        elyC 2125552 .. 2125567 -  -3.2  -3.62572   TATCACTACCTGAAA              CAGGCA CCGG TGTCTG               AATCCTTTGTCTACC  51 105
LQF52_RS09415 NONE
LQF52_RS09410 NONE
LQF52_RS09405 2110665 .. 2110677 -  -2.7  -4.85782   CGTCGTAAAAACAAA                CTTCA GCG TGAAA                TCGTCGACAACGAGA  74 420
        sbcB 2105019 .. 2105038 - -10.7  -4.95843   ACATAAAAGAGAAAA            GCGGAGC CAGTGC GCTCCGC             TTTTTTATGCTTTAG 100 37
LQF52_RS09315 NONE
LQF52_RS09310 2090996 .. 2091009 -  -2.4  -4.35483   CGTTATCAGAATAAA               CACA GAAAAT TGTG                ATTATTTTTTTAATC  59 273
LQF52_RS09305 2088816 .. 2088836 -    -9  -2.52543   ATGCCGTTGAATCCA            GCCCTGAC GTGAT ATCAGGGC            TGGAAGGTAAAACGT  65 40
LQF52_RS09300 2086602 .. 2086614 -  -4.8  -4.09685   CGTGAGGCGTTAAAA                CGAC GTCCA GTCG                CTTTCTGACGATGCG  63 7
        hisL 2085113 .. 2085137 - -15.8  -5.60993   TGGGCCATAAAAAAA          CCCTCGGAAG GTGAT CTTCCGAGGG          CTCTCTTTGTGTTCT 100 64
        hisG NONE
        hisD NONE
        hisC NONE
        hisB 2080656 .. 2080670 -    -5  -3.72027   AGCCGGTATCAAGAA               TGACGA CCT TCATCA               GAGCACTCCTTTCGA  59 23
        hisH NONE
        hisA NONE
        hisF NONE
       hisIE 2077821 .. 2077837 - -10.1  -4.45485   ACCAGACTTATAAAA              GCACCCA TCT CGGGTGC              TTTTTTACATTTATA  89 138
LQF52_RS09220 2070083 .. 2070105 - -13.6  -4.77165   CTCTGGATAATAAAA           TAGCCCTTTA GGA TAAAGGGCTA           TTGGTCGGTGGCTAT 100 97
        focA NONE
        pflB 2066484 .. 2066503 - -11.4  -4.84359   CGAGGGTGAGAAAAA            GGCCCCAC TGAC GTGGAGCC             TTTATTTTACGCCTT 100 59
        pflA 2065484 .. 2065504 - -13.3  -4.67038   CCGCCAAAATGAAAA            TAGCGCGCC CTG AGCGCGCTA            TTTTTCCAGAAAGCG 100 48
LQF52_RS09185 2060185 .. 2060214 -  -6.5  -3.10715   CCGATCACCACCCAA       CGCCATTAGCT GCTGCTTG AGCTAACGGCA        TCGAGGCTGGCCAGC  56 1
        trxB 2049431 .. 2049462 - -15.2  -3.52207   GCAAACCAGAAGGAA      GAAAACGGAACGGC TATT GCCGCTCCGTTATC       AGTACACTCTTACTT 100 35
        cydD NONE
        cydC NONE
         aat 2044921 .. 2044942 -  -5.9  -3.09492   TTTTTAACCGCAAGA           TAATGCCGA AAAA CCGACATTA            TGTAAAGAAGCGTTC  52 74
        infA 2044582 .. 2044604 -  -9.1  -5.26119   TCCCCAAAAACAAAA           GCCCTTGCC ATGAA GGGAAGGGC           TGGGGAGGGAGTCAC 100 80
LQF52_RS09125 2042676 .. 2042686 -    -4  -3.31248   TAATATTCTGCATAA                 GAAA CCG TTTC                 TGGCTGAAATAGGCC  49 415
        cspD 2038997 .. 2039020 - -12.5  -5.84381   CGACCAATAAAAAAA          TGCCGTTCG ATATGA CGAACGGCA           TTTTGTCGCATTATA 100 98
LQF52_RS09095 2035913 .. 2035927 -  -4.3  -3.60475   AAGTTGCATTTTAAA               TGCTT GTTTA AAGCA               TAGTGTTAGCCGAGG  55 168
         hcp NONE
         hcr 2033008 .. 2033044 -  -8.8  -2.90199   CGTAATTAAACATGA   CCTACCTGCCCGATAGC CAAG ACTACCGGACAGA-AGG    GGGTAAAACGCGGGC  65 44
LQF52_RS09080 2030978 .. 2030992 -    -7  -4.24204   TATTGAGATCGAAAA               CGCGGG CTA CCAGCG               CACGCTAACAGGCTA  74 473
        artP NONE
        artJ 2028509 .. 2028519 -    -4  -2.76315   GCAAGAGGTTGAAAT                 TCAA TCA TTGA                 GCGTCAGATTACTGC  45 34
        artQ NONE
        artM 2027086 .. 2027104 - -10.3    -5.626   CACGCCATAAAAAAA             GCAGGCT ATCAA AGCCTGC             TTTCTAAGTGGATAA 100 53
        artJ 2026037 .. 2026055 - -14.6  -3.63569   GGAAGCGTTCAATAA             CGCGGTGT ATC ACACCGCG             TTAAGCTAAGTGGAT 100 42
LQF52_RS09040 2024684 .. 2024706 -    -4  -3.54543   ATTCACGCCTTCAAA           GCCAGAGGTC AAG GAGCTGCGGC           GGTTGAGTAACCGTG  52 57
LQF52_RS08990 2014620 .. 2014638 -  -8.8  -5.31456   TGAACCTATAAAAAA             GCGCGG ACGGTCG CCGCGC             TTGTTTTGTCAGTTT  95 70
LQF52_RS08980 2012009 .. 2012049 -    -4   -5.2894   AAACAGAAAAGAAAA CGCCCATCGTTCTTGAACCT GAA AGG--CGGGAACGATGGGCT CCTCAATAAGGGGAA  79 131
        deoC NONE
        deoR 2009992 .. 2010025 -    -6  -2.80816   TCGCGATGGATGATA     TTCCAGAGGCCGGTT TCTTT AGCCG-CCTCTGGGA     TACGGTTATGATGAA  50 219
LQF52_RS08945 2005194 .. 2005223 - -18.1  -3.14132   GTCGGGTTGGAGTAA       TAAATCAGGCACC TTGC GGTGCCTGATTTA        CTTAAGACAGCGGAA 100 27
        rimO 2002449 .. 2002477 - -17.6  -5.26119   GGTGTAAAAATAAAA        CGCCAGCTTTTC GGGCT GAAAAGCTGGCG        TGATAAGCGTATTAA 100 37
        sanA 2001313 .. 2001323 -    -4  -2.84098   GGCGTTAACCAACTA                 TTTG CTG CAAA                 CGCTGATTTGTGTGG  43 229
LQF52_RS08910 1997016 .. 1997033 -    -7  -4.06866   GGAGAAAGAGAAGAA             CGCGAT AAAATG ATCGCG              GCCGGAATTAATAGC  70 364
LQF52_RS08905 NONE
LQF52_RS08900 1994702 .. 1994712 -  -3.2  -3.57507   ATTAACCGAAATGAA                 TCAC TGA GCGA                 ATCGATTTGCCTTCA  51 1
        fghA 1993719 .. 1993744 - -19.1  -3.67188   AGGGACGTGAAAATA         GCACTCGGGAG ACAC CTCCCGAGTGC          GGTTATCAGCTAGAT 100 84
LQF52_RS08890 NONE
LQF52_RS08885 1992507 .. 1992528 - -15.9  -3.66784   CGAGTGGGAAGAGAA           GGGCGGAGA GGAT TCTCCGCCC            CAAAGGCTATGATTT 100 52
LQF52_RS08875 1989592 .. 1989603 -  -7.2  -3.05715   AACGTGGTGACGGAA                GGGG AGCG CCCC                 GTTAGATGAAAGTGG  60 46
LQF52_RS08870 1988279 .. 1988293 -  -7.2  -3.25823   TGCCCGGCAGAGGAA               TGATGA TAT TCATCA               ATTTTAATTGATTAT  62 364
LQF52_RS08845 1980675 .. 1980687 -  -6.3   -4.1822   CGTTAGCCGAATAAA                TGTTC GAA GAACA                GATTAATGCCCGCAC  70 0
         nfo 1979692 .. 1979718 - -18.1  -2.94416   GATGTGGATGAGATA         GCGCCAGTTGG GTAAA CCAACTGGCGC         TTTTTACTATTATGG 100 55
        setB NONE
        yeiP 1973317 .. 1973333 -  -6.6  -2.82742   ATCCGGCGACAAGTA              TTGTGC GGAAA GCACAA              TGTAGACTGTTAGTC  55 35
LQF52_RS08805 NONE
LQF52_RS08800 1971280 .. 1971304 -  -3.5  -3.32756   ATGCCAAACGAAAAC          GAGACTCAGAC TAA ATCAGAGTTTC          TTCTTAGCCAAACAC  48 236
        mepS 1970507 .. 1970530 - -15.4  -5.67063   TCCATCATAAAAAAA          CGCCGCTTAT GGTG ATAAGCGGCG           TTGATGTCGTCTGGT 100 106
LQF52_RS08790 NONE
LQF52_RS08785 NONE
LQF52_RS08780 NONE
        yejF 1964399 .. 1964412 -  -6.7  -3.84514   ATCGCAATGATGAAA               GCACA GCAA TGTGC                CGTCTGAAAAATGTT  65 126
LQF52_RS08755 NONE
LQF52_RS08750 1959464 .. 1959489 - -11.1  -2.78695   CTTATATAAAGTAAT         CCTGCTACAGG CGAC CCAGCAGCAGG          TTGGGTTATTCAGCT  74 109
        rplY 1959096 .. 1959111 - -11.8  -5.93809   TTGTTATAAAAAAAA              CGCCGC ATAA GCGGCG               TTCTTCTTTTCCGGC 100 67
LQF52_RS08740 1957842 .. 1957877 - -10.5  -3.27475   GTCGGCACCAGAAGA    CGCTGCCCTTTTTCT TACTTC AGGAAAAGGGCAGTG     GCTGATGACGGTTTG  74 53
LQF52_RS08730 NONE
        yejM NONE
LQF52_RS08720 1954348 .. 1954370 -  -6.3   -5.1764   TAGACAACAGAAAAA           CAGAAGGTT TATGC AACCTACTG           TTTAATCTGTTATTT  87 85
LQF52_RS08700 1949250 .. 1949264 -  -4.3  -4.77036   CGTCAGTAGTAAAAA               TCCTA ACTGA TAGGA               TAAAAACAATAAAAC  73 54
LQF52_RS08695 1947471 .. 1947490 - -13.6  -5.30155   TCATGAACTAAAAAA            GTGCAGGG GAGA CCCTGCAC             TTAATTTATATGAAT 100 120
LQF52_RS08685 NONE
LQF52_RS08680 1943439 .. 1943450 -  -7.2  -4.75288   CCACACGAAAACAAA                GGCG ATGT CGCC                 GCAAACCAACGGTAT  83 340
LQF52_RS08660 1941046 .. 1941067 -  -3.1  -3.55563   ATCTCACTTGGCAAA           TTTAGTTCA CAGT TTAACTAAA            AAGTTGATTTCTTTA  50 154
LQF52_RS08635 NONE
LQF52_RS08630 1934834 .. 1934846 -  -4.1  -4.28115   ATCAAACAAAGCAAA                TCGCT TAT AACGA                TCGATGGTTTACTTG  62 143
LQF52_RS08625 NONE
LQF52_RS08620 NONE
LQF52_RS08615 1933009 .. 1933032 -  -6.7   -5.2422   AAGCAGATGAAAAAA          GCCCGTAGC GGTGAA ACTACAGGC           TGGTGCTTTCCCTAA  87 61
LQF52_RS08555 1917765 .. 1917782 -  -6.3  -3.48276   TTCTTGTGTATAGAA             GCTCGCAG AAT CTG-GAGC             GTATAATTTTACATA  60 256
LQF52_RS08530 1912899 .. 1912912 -  -2.4  -3.14132   TGTTGGGCGGATTAA               CACT GACAGA AGTG                ATTTCTGGCCTGTTG  42 477
        rhtA 1909931 .. 1909945 -    -5  -3.05816   TTAGTCGGGATTCAA               TTATCC TCT GGACAA               TAAAAACCTATTCAA  50 165
         dps 1908638 .. 1908653 - -10.4  -4.72986   GACTGGCAGCAAAAA              GGCTGC CTAA GCAGCC               TTGAACGCGTTCACG  91 56
        glnH NONE
        glnP NONE
        glnQ 1906119 .. 1906134 - -11.8  -4.23674   TGCGAGTAAGAGAAA              GGGGGC GAAA GCCCCC               TTGTTGATCAAGATA  95 33
LQF52_RS08470 NONE
LQF52_RS08465 1900540 .. 1900577 - -10.7  -5.95946   GGAAGAAGAAAAAAA   TGAGCTGAAAGCGTGGAA AAC TTAC-CGCTTACAGCTCA   GTCGAGTTGATATTA 100 256
LQF52_RS08320 1874143 .. 1874189 -  -2.4  -4.25458   AAGGGTATTAATAAA CATG-CTATTTCTGACCTCGAT AAGTA ATCGAGGTCAGTC-TAGACAAG GTGTCCCGCTATTTA  57 34
LQF52_RS08315 1873506 .. 1873519 -  -5.3  -4.91109   GCCCTATGACAAAAA               TTACG GCGT CGTAA                CCGATTGAAGTGCTT  77 55
LQF52_RS08305 1871598 .. 1871609 -  -3.6  -3.60104   GGCAGAGGAGAAATA                CCAC AGTG GCGG                 TCTATGGAGTAATAC  51 494
LQF52_RS08290 1867864 .. 1867875 -  -4.4  -3.76373   TGGCGAACATCGAAA                CTGA ATAA TCAG                 TACCCCCTTCCCAAT  58 97
LQF52_RS08245 1859845 .. 1859866 - -11.5  -4.20932   AAGACGTAGTGAAAA           CGGCACGCC GTAC GGCGTGCCT            GACTTCGGCGTAGCG  93 41
        pepT 1856719 .. 1856731 -  -6.2  -3.49107   ATTCAAAAAGGAATA                CGGC CTGAC GCCG                TCGGCGCTGCGGCTG  57 106
LQF52_RS08225 1854838 .. 1854859 - -10.1   -2.8155   GACAAGTAAAATCGA           TAGGGAGCC CAGC GGCTCCCTT            TTTTTATCACGTTAT  71 37
        hlyD NONE
LQF52_RS08180 NONE
LQF52_RS08175 NONE
LQF52_RS08170 1840321 .. 1840343 -  -3.5  -3.15427   AATATCGGCGAGCAA          CTGTCCGTTG ATGA CAA-AGACAG           CTTCCGTAAATACTC  45 194
        yvcK 1835039 .. 1835057 -    -3  -3.16564   GCCCTACGCGATGAA             GTACAGGC ACT GCGCGCAC             AATTTATCGCTGTAT  45 481
        bioA 1824699 .. 1824714 -  -4.8  -3.68231   AATAAAATGAAAAAC              TTATTC GTGT GAATAA               TTATAAGAGCGGTAA  57 116
LQF52_RS08075 1823667 .. 1823710 - -11.8  -4.08974   AGCCGATGAGATAAA TTCGGTTCAACCCCAC-GCCA GCG TGGCAAAGAGGTTGAACCGGA AAAGACAGAGATTAT  93 48
LQF52_RS08070 NONE
LQF52_RS08065 NONE
         cdd NONE
LQF52_RS08055 1819405 .. 1819422 - -14.1  -5.80364   AGCTGAATAAAAAAA             GCGCGGC AAAT GCCGCGC              TTTTTAGCAGTAAGG 100 44
        moeA NONE
        moeB NONE
LQF52_RS08020 1810627 .. 1810658 - -21.8  -4.28432   AATCTGAACGTAAAA      CAAACAGGGACACC GCAT GGTGTCCCTGTTTG       TTTATAAAGAATGAG 100 49
LQF52_RS08010 1807909 .. 1807933 -  -8.6  -2.78679   GTTTTCTATCGAAAT          GTGCCTGCAT GATTA ATGTAGGCAC          GATCTTTTCCCTTAT  64 43
LQF52_RS08000 1805460 .. 1805499 -  -3.4  -3.06815   ATTCCCGGCAACAGA  GAGCCTGCCCAGACGC GTTATTTT GCGTCTGGGGCGTATC   GAACTCAGTCTGTTA  45 74
LQF52_RS07995 1803930 .. 1803956 - -16.7   -4.2461   ACGGTCATGAAGAAA         TAACGGGAGGC AAATG GCCTCCCGTTA         TTTTTGCGGACGTAT 100 52
LQF52_RS07975 NONE
        mtfA 1799223 .. 1799237 -  -2.7  -2.78463   ACGGGGCGCATGATA               TCCGC CACCC GCGGT               ACTGTCAACGGCAAA  41 97
LQF52_RS07960 1799086 .. 1799111 - -16.3  -5.69262   GGATAAAAACAAAAA         TCCCGCTTAAG TTTC CTTAAGCGGGA          TTTTCTAAATTTGGC 100 37
LQF52_RS07930 NONE
LQF52_RS07925 1792835 .. 1792858 -  -9.7  -4.08394   ATATGTTTTTGAAAA          TGGCGATAA TATTTC TTATCGCCA           TTTTAATTATTGGTT  81 61
LQF52_RS07915 NONE
LQF52_RS07910 NONE
LQF52_RS07905 1789584 .. 1789617 -   -19   -3.2827   TCATTGAATTATGAA     CACCGACTCGCTGA TTTCGG CCAGCGAGTCGGTG      TTGTATTTTTTACAC 100 35
LQF52_RS07895 1787105 .. 1787134 - -15.2  -3.61232   CGTTTGAGACAAACA       GTTGTGCTGCAA CATCTT TTGCAGCACAAC        ATAGGGATTCAACCG 100 72
LQF52_RS07880 1784358 .. 1784370 -  -4.9  -2.62983   GTTATCCCCATATTA                TTTAC GTT GTAAA                AGGGAGTGGTTCGCT  48 100
LQF52_RS07870 1783150 .. 1783175 - -16.3  -5.69262   TGATAAAAACAAAAA         TCCCGCTTAAG TTTC CTTAAGCGGGA          TTTTCTAAATTTGGC 100 133
LQF52_RS07855 1781134 .. 1781159 -  -3.9  -5.46706   ATGCTAAAACAAAAA         TCCTGCCTAAG TTTC CTAAAGCGGGA          TTCTTAAATGTGGTC  83 80
LQF52_RS07850 NONE
LQF52_RS07845 1778544 .. 1778569 -  -9.7  -5.46629   AAGAGGCTAAAAAAA         TCCCGCCTAAG TTTC CTCACGCGGGA          TTTCTACATTTGGTT 100 132
        dgcJ 1776354 .. 1776365 -  -7.2   -4.2828   CCTTATCGATGAAAA                GCCC TTCG GGGC                 TTTTCATGAAGACTT  74 122
LQF52_RS07815 1773269 .. 1773279 -  -2.4  -4.03811   GAGAGTATGAAATAA                 CGGC TAT GCTG                 CATTCTCCAGAATGA  55 44
LQF52_RS07800 1769726 .. 1769741 - -11.8   -3.5944   ATTTATACCGCGAAA              GGGGCG CTGT CGCCCC               GAATTCAAAAGGTGC  89 53
LQF52_RS07795 1767979 .. 1767991 -  -4.8  -4.40561   CTCTCGCAAAAACAA                TCCG CGCCT CGGA                ATTAGATTGGACGTT  68 435
LQF52_RS07780 1766332 .. 1766349 -    -7  -3.25896   TTATCACTGAGAAGA             TCGGCT TGAGTC AGCCGA              CTGTCACCGGCCATC  56 196
LQF52_RS07770 1764735 .. 1764755 -  -2.6  -4.20516   GCGGGAGTTAACAAA            TTATCTGA AAAAA TCAGAGAA            GAGGGAGTAATGCTA  58 379
LQF52_RS07755 1763206 .. 1763254 -  -4.7  -3.33492   TTATTTAGGGTATAA CGCGAGATCCGCACATTGCT GAGGGAAGAA ATCAATGTACGGATCGC-CG TCAAGGCTTAATAGC  52 33
        yghU 1762168 .. 1762211 - -13.1  -2.82516   GCGCGTATTACTACA TTCGGCCTTTGCCTCCTCC TTGACG GGAGAGGGCAGAGGCCGAT TTTTTTAGCCGTTGA  85 72
LQF52_RS07740 NONE
LQF52_RS07735 NONE
LQF52_RS07730 NONE
LQF52_RS07725 NONE
LQF52_RS07720 1756273 .. 1756286 -  -5.9   -3.5774   ACTGAAGCCGGGAAA               CCCAC GTTT GCGGG                CGCTACAGTTTTTGG  57 143
LQF52_RS07710 1754544 .. 1754569 - -11.3   -2.7314   GTGGAAAGCACAGCA         GTCTATCTCAC TAAA GTGAAATAGAC          GTGATGACAATTATA  77 36
LQF52_RS07695 1749667 .. 1749683 -  -2.1  -2.94934   AGAAAATGATAATCA              TTCGCTG TTG CAGCGCT              ACCCGAATCCAGTCT  41 83
LQF52_RS07690 1748221 .. 1748233 -  -9.1  -3.10612   TTCAACCCGAATACA                GCAGG CTT CCTGC                GCATTTTCCCTGTCA  68 38
LQF52_RS07685 1745951 .. 1745966 -  -3.3  -3.23174   AGATGGTGATAAAAG              GCATT CAGTGT AATGC               TGTCGGGATGGCTGA  46 87
LQF52_RS07680 1744847 .. 1744861 -  -4.2  -2.64274   ATTGCCGTAAATCCA               GATGCA TAT TGCAGC               TACCTACCGTGTCGA  44 163
LQF52_RS07675 1743678 .. 1743703 -  -5.5  -3.72027   ATTTTTCAGGAAGAA         TTGAAAGCGGAG GAT CTCC-CTTTCCA         AAGCTCGCCGCGTCT  58 237
LQF52_RS07665 NONE
LQF52_RS07660 NONE
LQF52_RS07655 1738270 .. 1738296 - -17.4  -3.05498   CAGTGTACAGATAGA         CGCGATCTCACT GGG AGCGAGATCGCG         TTAAGGTGTGAGGGT 100 40
LQF52_RS07645 NONE
LQF52_RS07640 1735591 .. 1735603 -  -4.7  -4.83615   GATCCGTTATAAAAA                GCCCG TTA CGGGG                GAATGTGTTATTGAT  73 77
LQF52_RS07635 NONE
LQF52_RS07630 NONE
LQF52_RS07625 1730904 .. 1730943 - -11.5  -3.15354   CAGCGTAACTGAAGA  TGCACAGCCCCGCCA TCGTGAAATC TGGCAGGGCTGTGAA   CGTGGAGAGAGACGG  81 67
LQF52_RS07620 1729348 .. 1729371 -  -6.7  -2.62263   AGTCGCGCCAGAGCA          GCCGACCGCC TGAAT AG-GGTCGGC          TGTCTGAACAACGCT  55 47
LQF52_RS07615 1729002 .. 1729021 - -11.4  -3.24032   AGGGTTGAAGCAATA            CGCGGGCA GGGA TGCCCGCA             TTCTCGATACCAAAG  81 50
LQF52_RS07595 1723239 .. 1723256 -  -6.9  -2.71268   CCGTATCAGAGATTA             GCTCCGC AAGT GCTGAGC              AATCGACAGGGGTTG  52 470
LQF52_RS07570 NONE
LQF52_RS07565 1715574 .. 1715587 -  -2.3  -4.70887   GCATTAATAAACAAA               GGGAT AATT AGCCC                TCTTTTTCTTAATGA  64 220
LQF52_RS07560 1712784 .. 1712805 -  -8.7  -4.07568   GTGTCTGTCGTAAAA           GAGGATGAG CCCT CCCATCCCC            TTTGTTTTCCTGCCT  78 63
LQF52_RS07555 1712077 .. 1712102 -   -12  -3.64703   CGGTGTTCACTCAAA         CGGCTAAAAG CGTCAT CTTTTAGCCG          TTTTCTTATGCCGCC  89 31
LQF52_RS07550 NONE
LQF52_RS07545 NONE
LQF52_RS07540 1707115 .. 1707127 -  -2.6   -3.0362   CCTAAATAGGATATA                GCCG CACAT CAGC                GTTTGTGTTCTGAAT  43 49
LQF52_RS07535 1705048 .. 1705077 - -15.1  -4.19177   ATCTGGCAACAGAAA       TGAAAGCCGCCCA TTGC TGGGCGGCTTTTA        GGTAGAGAGAACCGA 100 42
LQF52_RS07500 NONE
LQF52_RS07495 NONE
LQF52_RS07490 1696522 .. 1696535 -  -5.2  -2.60219   CAGAATGGGTATAAC               GCGC AAGCTA GCGC                TGCATTCCCCAGCGT  48 19
LQF52_RS07485 1695249 .. 1695276 -   -17  -3.19449   TAAATAGCTTATGAA        CGGGCGCGTCGA GTGA TCGAGGCGCCCG         TTTCTTTTATGGATT 100 46
LQF52_RS07470 1691257 .. 1691267 -  -2.4  -3.21276   CGTTTGTTCACAATA                 GTGC ATC GCGC                 CAGTCTAGGGAGAGT  44 87
LQF52_RS07465 1689801 .. 1689834 -  -2.1  -3.49048   CTGTAAGGAAGAACA     GGTTAGCGTCGGGGC GCAG GCACCGGCGCTGGCG      GCCTACGATCTGGCG  47 447
        fdhF 1677154 .. 1677164 -  -6.8  -4.20806   CATTGTAAAATGAAA                 CGCA AAT TGCG                 CTAAATTGGAATAAA  72 307
LQF52_RS07415 1675411 .. 1675437 - -14.4  -2.78384   TCGCCTGCCAGCAGA         GTCTGCTCCGGC CAG GCCGGAGCAATC         CTGTTTTACTGGTGA  87 31
LQF52_RS07410 1674177 .. 1674189 -  -4.9   -2.7317   ACAGATGGTGAATTA                CTTAA AGA TTAAG                TAAAAATAAAAGAAC  49 277
LQF52_RS07405 1672426 .. 1672445 - -13.6  -5.76633   CGAGAGATAAAAAAA            TAGCGGCC CGAA GGCCGCTA             TAGATGACATATTCA 100 52
LQF52_RS07395 1670251 .. 1670263 -  -9.1  -3.72576   GCTGTGGCGAGCAAA                TCGCC TGC GGCGA                AATGGACGGCGTCAT  70 308
LQF52_RS07380 NONE
LQF52_RS07375 NONE
        uhpC NONE
LQF52_RS07365 1663374 .. 1663408 -  -5.7  -3.31461   TAGCGATGCTGAGAA     CACGGCGTTAAGC GAAATGCGA GCTTACCGCTGTG     TTCCCGTTGTTTTTA  56 82
LQF52_RS07360 NONE
        fbpC 1660083 .. 1660102 -   -15  -4.61873   TTGTAGAAAGTAAAA            CCGGGAGC AAGC GCTCCCGG             TTTGTGGTGGATAGC 100 51
LQF52_RS07350 1658789 .. 1658818 -  -2.4  -4.66163   ATCGGTAGTGAAAAA      CTACTGTTGTGTAA AGGG TTACA-AACAGT-G       TAAAGGATTACAGCC  64 33
LQF52_RS07345 1655328 .. 1655348 -  -7.6  -4.33105   CAACCAGGATGAAAA           GAG-GCGGT AATA ACCGCTCTC            TTTCGTTGTTTTTTT  77 58
LQF52_RS07340 1653724 .. 1653735 -  -7.2  -3.40403   CGGGGCGCATGATAA                CGGC GTGT GCCG                 TGCATGTCAAAGGCG  63 131
LQF52_RS07335 1653586 .. 1653611 - -16.3  -5.69262   TGATAAAAACAAAAA         TCCCGCTTAAG TTTC CTTAAGCGGGA          TTTTCTAAATTTGGC 100 37
LQF52_RS07310 1648487 .. 1648505 -  -5.2  -4.36914   TGTTTTCCTAGAAAA             TCCAGCGT CCG ACACTGGT             AGTGTCCGGTGAACA  68 273
LQF52_RS07295 1646507 .. 1646535 -  -3.8  -3.52102   ATTTTATCGAGAGAA       CGCTGCCAT-GGT GTTT ACTGATGGCGGCG        TTCTCTCATTTTTAA  52 189
LQF52_RS07285 NONE
LQF52_RS07280 1644800 .. 1644814 -  -5.6  -3.95378   GTATATCTTAAATAA               TCCGCG CTG CGGGGA               AGACGATATTACCAG  63 34
LQF52_RS07270 NONE
LQF52_RS07265 NONE
LQF52_RS07260 NONE
LQF52_RS07255 NONE
LQF52_RS07250 NONE
LQF52_RS07245 1635184 .. 1635194 -  -3.2  -2.71731   GTCAGGGTTGAACCA                 CCTG AAT CAGA                 CGTCTCGGTTCACAG  43 21
LQF52_RS07240 1634344 .. 1634359 -  -2.5  -3.96148   TTGCCGGAGGACAAA              GC-GGC AGATA GCCTGC              TGGTGGTCGAAGTGT  54 500
LQF52_RS07185 NONE
LQF52_RS07180 1619008 .. 1619025 -  -2.5  -4.49906   GAATATGCAAAGAAA             CGGTGGG AGCT CCCGTCG              TTACTTTCAAAATAG  63 67
LQF52_RS07120 NONE
LQF52_RS07010 NONE
LQF52_RS07005 NONE
LQF52_RS07000 1573480 .. 1573520 - -14.3  -3.75295   CAGAAATTAGGTAAA CAG-CAGCACCTTTAG-GC TATGT GCTCTAAAGGTGCTGGCTG TCGCTGTACCGGGCT 100 10
        metG 1565034 .. 1565051 - -11.3  -5.75342   TTGTTGCAAAAAAAA             GCCGGAT TAAA ATCCGGC              TTGATGTGGTGATTA 100 38
        fdnG NONE
        fdxH NONE
        fdnI 1559985 .. 1560001 - -13.7  -5.69262   TGATAAAAAGAAAAA              TGCCCGC GAG GCGGGCA              TTTCAGGCCGTTGAC 100 211
LQF52_RS06950 NONE
LQF52_RS06945 1557394 .. 1557415 -  -9.4  -3.44274   CAAGCACAACATTAA           GCCCTGCA TTGATC CGCAGGGC            TTTCTTTTCGATTAG  75 37
LQF52_RS06930 1554679 .. 1554698 -  -5.6  -3.54424   CTTGAGTTCTTTAAA            GCCTC-CGG CTT CCGGGCGGC            TTTTGAAGACAAAGG  55 222
LQF52_RS06920 1552365 .. 1552397 - -13.6  -2.60257   ATAGCGGAGAATGCA     CTGGGATGAGGT-GCC ATA GGCGACCTCATCCC-G     TTTTCTCCTTAAATA  86 56
LQF52_RS06915 NONE
LQF52_RS06910 1550003 .. 1550053 -  -9.1  -3.59266   AGATTACCATAAATA TCTC-TGGC-TGCATCCCGCAGACG TCG CACCTGCGGGATGAATACCGTGAGA GAATGAACAGTCTAA  75 45
LQF52_RS06905 1548906 .. 1548947 - -14.5  -3.58361   ATAAAAAGTAAGTAA TAGCTATCAACCTGCGGTC AGCG GACCGCAGGTTGTCAGACA  TGAAAAAGGTCTGTC 100 45
        modE NONE
        modF 1542405 .. 1542417 -  -2.7  -3.52652   CTTAGTGAAGCATAA                TCTAC AGT GTAAA                TGAGCCCGGCTTTCT  48 89
        galE 1541257 .. 1541268 -  -3.6  -5.00884   ACTCGGTGTAAAAAA                GCGC CGTC ACGC                 TTCGTCGTACCCATT  72 20
        galM 1540038 .. 1540059 - -11.7  -3.55071   GCATAGTTTTGTAAA           TTGGCAGAT AGCT ATCTGCCAA            TGTTATCAATGGGTT  88 61
LQF52_RS06855 1539375 .. 1539388 -  -5.3  -2.73681   CAGTCACCCGAATCA               CTTAC CTGA GTAAG                CTCATCGGGATTCCT  49 141
LQF52_RS06850 NONE
LQF52_RS06845 NONE
LQF52_RS06840 NONE
LQF52_RS06835 1532947 .. 1532957 -  -2.6  -2.57344   GATTTCTGTGATAAC                 TAAT TTC ATTA                 TAGGGGTGTAGAACG  40 114
        gpmA 1532065 .. 1532093 - -13.9   -5.0133   GAGGGCGGTAAAAAA        GAAGCCGCAACGT TAC ACGTTACGGCTAC        CTTCAAAAGCTTAAC 100 88
        zitB 1528247 .. 1528260 -  -9.5  -4.35116   GAGCGCACAGGAAAA               CCGCG TCAG CGCGG                TTTCACACGGCGCGT  86 50
LQF52_RS06800 1525342 .. 1525361 -  -2.1  -3.91197   TCAGAAAGGATTAAA            CCGCGTGC TGCCT GCACA-GG            AACACCGTTTGCCGC  52 468
LQF52_RS06680 1501729 .. 1501749 - -12.6  -4.86385   AGGGTCAAAAACAAA            GGCCGGAT GTGAT ATCCGGCC            TTTTTGCATGTACTG 100 47
LQF52_RS06625 NONE
LQF52_RS06620 NONE
LQF52_RS06615 1489607 .. 1489633 - -12.2  -3.20207   AACAGCACTGATTAA         GCGCCATTTCCG CTA CGGATCTGGCGC         TTATTTTGTTTTTAG  83 26
        kdpF NONE
        kdpA NONE
        kdpB 1484872 .. 1484882 -  -2.4  -3.51556   AGAAGAACGTAAATA                 GCGC ATA GCGT                 ATACCCGTCAGTCCT  47 40
        kdpC 1484252 .. 1484274 -  -4.7  -2.66695   GGCCGCAGCAAAGAC           GGCGGGGAG TCTGG CTCCCCGTA           TAATAATTAATAGTA  46 53
        kdpD NONE
        kdpE 1480749 .. 1480763 -  -2.2  -2.93566   GATACAGAAAGATGA               TTTTAC GGC ATAAAA               CGGTAGCCGATAGCG  41 13
LQF52_RS06575 1479969 .. 1479986 - -12.7  -3.74238   CTAAATAAGTGGAAA             GGCGCTG CTTG CAGCGCC              TAAGACTATTAATCA 100 279
        ybfF NONE
        ybfE 1475823 .. 1475840 -  -4.1  -2.71712   CGCGTGCTGGCAAAG             CGCTACC ACCC AGTAACG              ACAACTGGGAAAAAT  45 178
        fldA 1472735 .. 1472775 - -15.6  -2.50816   GTTTTACCTATCAAT  GCTGTTTCGGCTCTGATA GGGAT TATCAGAGCCGAAATGGC  TTAGCCAACCAGTTC  93 26
         fur 1471957 .. 1471978 - -11.7   -5.2015   GTAAGAAGACAAAAA           TAAAACCGC CTTG GCGGTTTTA            TTTTTTTATGCGGTC 100 44
        nagB NONE
        nagA 1466199 .. 1466231 - -12.9  -3.17723   TTAGGTTTAACTCAA      CGTTGGGTAAACC TTATCGC AGTTTACCCAACG      TATTTCCGCTTTACC  91 58
LQF52_RS06515 1464903 .. 1464934 -  -6.7  -3.83323   TTCATAGAAGGGAAA      GGCCGGATT-TTTA GTGAT TACATAATCCGGCC      AGAAAGGGAATCAGG  66 36
        asnB 1463036 .. 1463053 -  -9.8  -4.87786   TTAAGCGTACAAAAA             CGGGCC ATGAAA GGCCCG              TTGACTGAAGAAATT  91 49
LQF52_RS06505 NONE
LQF52_RS06500 1462653 .. 1462664 -  -4.4   -2.6021   ACAAAACACTAACAG                GCTT CGAA AAGC                 GATGTCAGACCGATA  46 49
LQF52_RS06495 NONE
LQF52_RS06490 1462429 .. 1462448 -  -2.8  -3.10611   TTCACTTCAACAAAT            CTTCCACT ATCA AGTAGATG             GCTGGGGTACCTGGA  43 24
LQF52_RS06485 NONE
LQF52_RS06480 1462180 .. 1462208 - -15.4  -4.87592   CCAGACATAACAAAA       CGGGGCGACA-TC TTTC GACTGTCGCCCCG        TTTCTTTGCTGTTTT 100 53
LQF52_RS06475 1461239 .. 1461255 -  -3.5  -3.34344   GGATGTGCTAATTAA              CGCGCGC AAT GCGGGAG              AAGAATGGGCTTCTG  49 257
        miaB 1458597 .. 1458615 - -14.6  -5.24129   GCCTGCCATAAAAAA             TGGGTGGC AAA GCCACCCA             TCATCATGCTGAGAC 100 56
LQF52_RS06460 NONE
        ybeY 1456736 .. 1456760 -   -10  -3.11024   TGTGTGAAGACAAAT          GCCCGATATC TTCCC GATCTCGGGC          TAGACAAAATGTATT  73 46
        corC 1455758 .. 1455772 -  -2.8  -3.18115   GTTGTAGAAAAGAAG               CGACAA CCA TTGCCA               AATTATTCTTCCAAT  45 28
         lnt 1454196 .. 1454213 - -11.3  -6.02919   CCATAAATAAAAAAA             GGCATGC AAAA GCATGCC              CTTAGGGATGTGAGG 100 50
LQF52_RS06440 1452690 .. 1452706 - -12.3  -5.40474   ACTCCGGTAAAAAAA              GGGTAGC GAA GCTACCC              TGAAGATTGATGAGC 100 208
LQF52_RS06435 NONE
        gltK NONE
LQF52_RS06425 1450496 .. 1450513 - -12.7  -4.06419   GTTGGGGATAAATAA             GCGTGCC TTGC GGCACGC              TTTATCTGAGTATTA 100 38
        leuS NONE
        lptE NONE
        holA NONE
        nadD 1444730 .. 1444740 -  -6.8  -5.06816   ATTGTTTAAGAAAAA                 GGTG AAT CACC                 GAGTAATTGCCGAGA  84 140
        rsfS NONE
        rlmH NONE
        mrdA NONE
        mrdB NONE
        rlpA 1439615 .. 1439641 -  -4.5  -3.05597   GTGATTTTGCAAAAG        GGCGG-TATG TTCAATGC CATAGCCGCC         TTTTTCGCTGCGTGA  49 60
        dacA 1438225 .. 1438253 - -11.8  -5.23316   CATTATACTAAAAAA        TATAACTCCCGC GTTGT GCGGGAGTTATG        AATGGTATCTATATG 100 70
        ybeD 1437834 .. 1437847 -  -2.3  -3.20028   TGTAGTATAAAATTA               TGCCG CATT CGCCA                ATTTTCCCGCCCGTT  44 76
        lipB 1436914 .. 1436926 -  -3.5  -3.60048   TTTTTTTTAAAAAAC                TATAA AAA TTATA                TCATCTTGCCTAACC  51 148
        lipA 1435794 .. 1435813 -   -15  -4.39166   TCTCACACAGCAAAA            CGGACGGC AATA GCCGTCCG             TTTTTTATTCCACAC 100 68
        crcB 1434426 .. 1434440 - -12.8  -4.57569   CGATTTCGTGAAAAA               CCCGCC TAT GGCGGG               TTTTTTTTGCTTCAA 100 71
LQF52_RS06335 1433022 .. 1433061 -  -3.8  -4.37886   TGAGGTGGTATAAAA  TGAGATATATCTTATATGC AAA AC-TATGAGAGATATCTCA  GCTGTGATGTTTTCC  64 231
LQF52_RS06330 NONE
LQF52_RS06325 1430867 .. 1430891 - -15.9   -4.3078   AATCATACGAATAAA          GCAGTATTGAG TCT CTCAATACTGC          TTTTTTTCTTTGTGA 100 160
LQF52_RS06320 NONE
        dapE NONE
LQF52_RS06310 NONE
LQF52_RS06305 1428081 .. 1428127 - -12.3  -3.78234   ACGGAAATGTAAGAA TCAAACCGCCCGC-CGCGCG GGGCTTAG CTCGCGTGCAGGCGGTTTGG CGATGATAGATGTCA 100 38
LQF52_RS06285 1421810 .. 1421823 -  -3.7  -4.02108   TTTATCAGAAGGAAA               CGTCG ACGC CGCCG                CGCAGCACTTCTTCG  59 1
LQF52_RS06265 NONE
LQF52_RS06260 NONE
LQF52_RS06255 1411668 .. 1411678 -  -2.4  -3.67597   CCTCTTATGCAATAA                 CCTG ATT CGGG                 CGTGTCTGCGAAACG  49 72
LQF52_RS06250 NONE
LQF52_RS06245 1410397 .. 1410430 - -15.4  -3.14344   GATGTGGGTCATTAA     CCGTGACAGCTCAGC TTATG GC-GAGCCGTCACGG     TTATGTTGTCGATTG 100 64
        trxA 1409041 .. 1409067 - -11.7  -3.14132   TGTTCGCTCGACGAA        TGCTGCGCCTCA TCCG TGAGGCGCAG-A         TTACGGTATCAGTCC  83 34
LQF52_RS06235 1408336 .. 1408350 -  -4.2  -5.03314   CTGACTGGCAAAAAA               GCGCTC CTG AAACGC               TGGCGAGAAGAGACC  80 190
LQF52_RS06205 NONE
         bcp 1401489 .. 1401510 - -10.9  -4.72333   AATGATAGGGAAAAA           CCGGCA-CGT ATG ACGGTGCCGG           TGGAAAATCTGAAAG  95 48
LQF52_RS06195 NONE
        arsC 1399446 .. 1399464 -  -7.4  -2.53876   TCGGACTGTAATTGA             CGATCGTC GTT GAGGATCG             CTTCCGGCTATTGTT  57 59
        purM 1395100 .. 1395114 -  -2.1  -3.49924   CTGAAATCAGCACAA               CGATG TTTTT CATCA               GTTAATAACCACTGC  47 23
        purN 1394416 .. 1394440 - -14.4  -3.71981   AATACGTAATAAAGA          GTAAGGCTCC GCAGG GGAGCCTTAC          TACTATGACGAGTCG 100 59
LQF52_RS06160 NONE
LQF52_RS06155 1390937 .. 1390961 -   -10  -3.20722   GGCAAGTAGCAAAAT          GCCCCGTATC GCTGA GACACAGGGC          TAAAGTGCATTAGAA  74 35
        speG 1390027 .. 1390044 -  -9.8  -3.42366   TGCAAAACCTTATAA             GCGCCC GACGCA GGGCGC              TCAAGCGCCGCAGCC  75 209
        tesA NONE
LQF52_RS06130 NONE
LQF52_RS06125 1384351 .. 1384372 - -10.2  -5.27335   GCCTGCAAATAAAAA           GGCCAGAA TCAACG TTCTGGCC            TTTTTCACAAGATAA 100 42
        tyrP 1381224 .. 1381248 - -10.1  -5.64421   AGTGGAAACAAAAAA          GAGCGTGAA TGCTGAG TTCACGCTC          TTTTTTTATGACGGA 100 118
LQF52_RS06105 1380139 .. 1380155 -  -3.5  -3.41024   TCGTCCAACACAACA              GGCGGCG CAG CGCGGTC              GTAGGTTAGTTGTCC  48 31
LQF52_RS06070 1371325 .. 1371339 -  -2.8  -3.39895   GCTGGCATCAATTAA               CGCT CCTGATT AGCG               GATAACGGCACGCGC  46 20
        rcsD NONE
        rcsB 1367937 .. 1367962 - -19.1  -3.72027   ACCTCTGAGGAATAA         CCTGCACCAGC GGCT GCTGGTGCAGG          TGAAGAAAGGCTTAG 100 37
        ubiG 1361029 .. 1361078 - -27.7  -4.88786   ATGAAAATAAACAAA TATCCACAGAGTTAGTCACAAAA GCAT TTCTGTGACTAACTCTGTGGATA AACACTAAATATGGA 100 292
        nrdA 1358674 .. 1358703 - -13.7  -4.37092   ACGCCTGCTATAAAA       GATGAAAGGCTGC ATCG GCAGCCTTTCATT        ATTGGCTTAAATCTT 100 32
        nrdB NONE
        yfaE 1357130 .. 1357150 -    -9  -3.72893   CACTTGCGTATGAAA           GCGGGCAGT AAAT AC-GCCCGC            CAGTAAACGCGGTAA  77 68
LQF52_RS06025 NONE
LQF52_RS06020 1355651 .. 1355667 -  -9.4  -4.01853   GAATAGTATCACAAA              GGGGAG ACTGG CTCCCC              CCAATAATGCGTTAG  81 41
        copA 1352347 .. 1352383 - -18.8  -2.71712   TGGTTTTCGGCAAAG    GAAAACGCGGCGCGTC TCAAC AACGCGCCGCGTTTGC    ATTACTGGCTTTTAG 100 27
LQF52_RS05995 NONE
        ybaK 1350013 .. 1350057 -  -4.3  -3.30443   TGACGAGTATATGAA GC-GGTAGCAGGGGAC-ACAC TGGCC GTGGAGTCCTCTGCTATCTGC TTCGCTTTGATACTA  52 78
LQF52_RS05920 1330216 .. 1330239 - -10.3  -5.87688   ACAACGTAAAAAAAA          TGGCAGGCA TTTATT TGCCCGCCA           TTTTCGTATTCAGCG 100 50
LQF52_RS05875 NONE
        rsmS 1320568 .. 1320583 -  -6.1   -3.6279   AAACCCGCTGAATAA              GCCGT TGATCG ACGGC               GCTAATACCCGTTGC  62 67
LQF52_RS05860 NONE
LQF52_RS05855 1315366 .. 1315380 - -12.8  -5.37593   CTGGAAAGTAAAAAA               GGCCGC TAG GCGGCC               TTTTAGGGGATATAG 100 55
LQF52_RS05850 NONE
        ykgO 1314737 .. 1314749 -  -5.5  -3.22475   GTTAGCGTCATAACA                CCGAC TGT ATCGG                GATGAAGTCGAGAAA  54 43
        tomB NONE
LQF52_RS05835 1313481 .. 1313500 -  -6.4  -5.09221   GATAATAAAAACAAA            GGCCGATA ATAT TATCGGCG             CAGTGTATTTAATGT  83 68
LQF52_RS05825 1312194 .. 1312214 -  -6.1  -3.33492   CGAGCTACCGTATAA            TCCGGCTGA TAT TCAGCCCAA            CGCGCGTATTTTACT  56 289
        tesB 1310702 .. 1310737 - -14.8  -3.66288   GATGGCTTAATACAA    TTAGACAGGCGTGGAG GAGA CTCCACGCCTGTTTTA     TTATCAGTCTTAAAC 100 89
LQF52_RS05785 1303076 .. 1303113 -  -2.8  -3.92746   GTTACCTGAAAAATA   GCCCGTATTCAGCGC TGCGGCTGT GCGCTGAATACAT-C   AGACTCACACCGGGC  54 30
        queC 1302137 .. 1302152 - -10.4  -2.67803   GTCTGATGAAAGCGA              CGTGGC CGAT GCCACG               CTGACGTTTGTCTGC  66 196
LQF52_RS05730 1290417 .. 1290461 -  -7.2  -3.30908   GACTAAACATGAAGA GTCCTTTCCCTTGC-TCCGAA AGCG TTCAGAAGCAAGGGAAGCGGC GTGCAGAAATTAACG  63 35
        ampG 1288884 .. 1288915 - -13.1  -3.12862   AGGAACGATGTAATA      GGTTCAGGCAGCA GATGAG TGCTGCCTGAACG       AATAGTAGTCAGTGT  86 34
        cyoA NONE
        cyoB NONE
LQF52_RS05710 NONE
LQF52_RS05705 NONE
        cyoE 1283650 .. 1283668 -  -8.1  -4.51812   GGGCAGAAGAAGAAA             CAGGCGG ACGAG CCACCTG             TTTTTCTTAATGCAT  82 57
LQF52_RS05695 1282141 .. 1282170 - -19.5  -3.14564   TCAGCCGCCGATGAA       TAGAAAGGCCAGC GTAA GCTGGCCTTTCTA        TTTAGTTCTGTCCTA 100 27
        panE NONE
        yajL 1279941 .. 1279954 -  -9.5  -4.05446   GTCCGTAATGAGAAA               GGCGC GTAA GCGCC                TTTTTCGTCAGTCTT  81 46
        xseB NONE
        ispA NONE
         dxs 1275159 .. 1275177 - -13.1  -3.11812   ACTGATATTATTGAA             CCGGGGC CATGT GCCCCGG             TTATCGTTAGTCGCT  86 40
LQF52_RS05625 1270069 .. 1270097 - -14.7  -3.38046   TGCTGACTGTAAACA        TAAAAAACCCCGC ATT GCGGGGTTTTTTG        CATCTTAGCGCTGGG 100 52
LQF52_RS05595 1263425 .. 1263450 -  -2.7  -3.42659   AGGCAAAGAGACCAA         TCAATGAGATAG CTT CTGTCT-ATTGA         ACTCATCGCTATTTC  48 238
LQF52_RS05590 1262669 .. 1262689 - -13.3  -5.27335   GCGGGCAAAGAAAAA            GCCAGCTGC ATA GCAACTGGC            TTGGTCATCATATTG 100 62
LQF52_RS05585 1261089 .. 1261115 - -10.1  -4.00882   GAATAGAAGAGTAAA        GCGTCCGCGCCA AGGA TGGCGCGG-CTC         GAGCTTACAGGGAGG  82 132
        sbcD NONE
LQF52_RS05545 1248032 .. 1248048 -  -2.1  -4.07678   CCGGAAAAGATTAAA              CCGTGGA TCT TCGGCGG              TGAGTGCGAAACGCC  56 117
        rdgC 1245904 .. 1245935 - -12.4  -2.75064   TCCGGCAGTGAAGCA      GT-ATTGCCCGCCGA ATA TTGGCGGGCAATCAC      CGACTGCATTAACAA  82 98
LQF52_RS05525 1242737 .. 1242749 - -10.5  -3.06796   CGTCACGCTAGGGAA                CGCCG TTG CGGCG                TATGTCGTGAGCCAC  69 86
LQF52_RS05485 NONE
LQF52_RS05480 1219842 .. 1219865 - -16.8  -4.07885   GACCTCCTTTCAAAA          CCTTCCCCCT TGGC AGGGGGAAGG           CGTTAATACCGTTAC 100 37
LQF52_RS05475 NONE
LQF52_RS05470 NONE
LQF52_RS05465 1214877 .. 1214903 - -20.9  -2.78384   CGTTCTGTTATGACA         GCGCCGCACGG TTATC CCGTGCGGCGC         TGCTGTTTGTGTACT 100 60
LQF52_RS05455 1211925 .. 1211950 - -17.7  -4.11623   GATGATGAAATGAAA         CAGACCGTGCT TGAT AGCACGGTCTG          TTGAAGATGGATGCG 100 91
LQF52_RS05440 NONE
LQF52_RS05435 NONE
LQF52_RS05430 NONE
LQF52_RS05425 NONE
LQF52_RS05420 NONE
LQF52_RS05415 1204208 .. 1204219 -  -7.2  -3.09834   CACGCGATTAGCGAA                CCGG TTTT CCGG                 CGCTGCTTCTTCATC  57 85
LQF52_RS05390 NONE
        fecR NONE
LQF52_RS05380 NONE
LQF52_RS05375 NONE
        fecC NONE
        fecD NONE
        fecE NONE
LQF52_RS05355 1190941 .. 1190958 -  -2.7  -4.07746   GTGTGAAAAAGATAA             GTGGA GCCAGTTT TCCAC              AATAGTCTGGGCGAG  56 94
LQF52_RS05345 1189694 .. 1189711 -  -2.8  -2.99319   AATGTCTGACATATA             TAAAGA TGATTC TCTTTA              GTCTAATGGGCTGGA  43 41
LQF52_RS05335 1188661 .. 1188671 -  -6.8  -3.10908   AAATGGATTATTGAA                 TGGC TTG GCCA                 GTCTTTTTTTTATCT  54 203
        mutS 1184205 .. 1184223 - -13.2  -4.18465   GCGTAAAAAAGAGAA             GGCACTGA TTT TCAGTGCC             TTTTTTGCATCCATC 100 49
LQF52_RS05305 NONE
         rof 1182101 .. 1182120 - -12.2  -5.27335   GCGCTGAAATAAAAA            CGGACAAC CTGT GTTGTCCG             TTTTGGAAGCATTGA 100 76
         map 1159270 .. 1159285 - -11.8    -5.626   CACGCCATAAAAAAA              GCCGGC GTCT GCCGGC               TTCGTGTTTACTGTT 100 33
        glnD NONE
        dapD 1155580 .. 1155600 -   -14  -5.67063   TTGAGCATAAAAAAA            CGGCGGGT GATTA ACCCGCCG            TTTCTAGTTTAGTCG 100 34
LQF52_RS05185 1155011 .. 1155031 -  -9.7  -4.13654   TGCTGAAATGACAAA            CGGGAGC CTGTCGT GCTCCCG            TTTTCGTTTGCGGCT  81 58
        queF 1148270 .. 1148280 -  -8.2  -2.76322   TCATTTAAGACACCA                 CGCG GAA CGCG                 CATGCGTTAAATACC  60 213
        ppnN 1146740 .. 1146758 - -14.6  -2.53822   CTGATGTGATAAGAG             GGGGAAGC AGA GCTTCCCC             ACATAGGTATGACCG  89 53
         xni 1145500 .. 1145515 -  -3.2  -3.48924   TTATGCGGTAGACAA              CGG-ACC AAT GGCACCG              AGCCTGATGGATACC  49 442
        csdA NONE
        csdE 1140261 .. 1140283 -  -6.2  -4.10161   CATCAGCGCGGAAAA           CGTGGCCGAG CTG CTCGACCAAA           ATTTCAGCTATGTGA  67 499
LQF52_RS05095 NONE
LQF52_RS05090 NONE
LQF52_RS05085 NONE
LQF52_RS05080 NONE
LQF52_RS05075 NONE
LQF52_RS05070 1129874 .. 1129894 -  -3.3   -2.5939   ATAACTAAAAATCAG            GACTGAA GTGATGT CTCAGTC            AGTGGTTTGGCGGTA  42 1
LQF52_RS05065 1128840 .. 1128875 -  -9.2  -3.53012   CTCTTTCGTTTGAAA    TCTCAGAAGTGG TGTAAAGATGAG CCACTTCTGAGA     TGAAACGCTTGCTCT  73 59
LQF52_RS05055 NONE
LQF52_RS05050 NONE
LQF52_RS05045 1127035 .. 1127050 -  -6.8  -5.86976   GCAGAAAACAAAAAA              GCACCC GTTA AGGTGC               TTTATCGTTTTAGTC 100 46
        argA 1124025 .. 1124052 - -17.1  -3.46534   TAAGCGGATGAAAGA        TCGTGGCCGAC TTTACG GTCGGCCACGA         GAAGCGTTATTGAGT 100 49
LQF52_RS05025 1121179 .. 1121189 -  -4.6  -4.06903   AATGGCGAAACCAAA                 GACG TTA CGCC                 AAGCCGTCTGCCGCC  60 303
LQF52_RS04980 NONE
LQF52_RS04975 1106468 .. 1106486 -   -11  -2.64803   GGACTTTGAAATTGA             GGGATACG ATC CGCATCCC             GCCATCAAAGCACCG  68 95
        mutH 1100404 .. 1100421 -  -4.1  -3.90291   ATCGCGCTAACGAAA             TTCAGCT GCTG AGCTGCA              TAAAGTGGCGGGCCA  57 9
LQF52_RS04945 1099337 .. 1099353 - -15.1  -2.71263   AATGTTGTGTAATCA              GGCGGCG GGT CGCCGCC              TGATTAGGGCGTCTT  89 67
LQF52_RS04940 1098986 .. 1099010 -  -9.4  -2.61144   CGAGGGGGGAAATAT         CAG-GCTAACG TTGC CGTTAGCGCTG          CACGATCTGGGAGAC  68 17
LQF52_RS04935 1097723 .. 1097744 - -10.9  -5.22481   GATAAAGAAAGAAAA           CCGAGCATC AAGT AATGCTCGG            TTTTGTCGTTTACGG 100 35
        mutY NONE
LQF52_RS04910 1094233 .. 1094250 - -10.5  -3.06831   GGAATGGGGACGTAA             GCGGGCC CGAA AGCCCGC              AATCTCAGTGGCTCG  73 30
        mltC 1093078 .. 1093108 - -20.5  -3.73775   TCTATCCTGATGAAA       CCGCGCTACCGGA ATAAA CCCGGTAGCGCGG       CGTTCTGTGGTGCGC 100 46
LQF52_RS04900 1091770 .. 1091781 -  -5.8  -3.48924   CGATTTGGCACAGAA                GCTG TCAC CAGC                 GCATTCAGCCTATAA  57 196
LQF52_RS04880 NONE
LQF52_RS04875 1086755 .. 1086771 -  -4.3  -4.32067   CATGGCAGAAAACAA              CGGCAGC GAT GCTACCT              TTTCCTGTGTGCTGT  66 177
        ansP 1085040 .. 1085063 - -18.2   -4.2528   CGGTAAGCCAAGAAA          CGCAGGCTCG GAAA CGAGCCTGCG           TTTTTTCTGCCCTAA 100 53
LQF52_RS04860 1082079 .. 1082094 - -10.4  -5.46698   CCCAAAAGCAAAAAA              CCAGCC GTTA GGCTGG               TTTCTTTAAATTAGT 100 40
LQF52_RS04850 1081356 .. 1081367 -    -3  -4.42788   TTCAACCCCATAAAA                TTTG GGAT CAAA                 TATCAGTCGCTCACT  60 81
LQF52_RS04845 NONE
        ccdA 1080445 .. 1080460 -  -5.4  -2.75481   TGGGAACTGTAAGTA              TCCCGT GTAT ACGGAA               CATTCATTTTTATAG  50 421
LQF52_RS04830 1078395 .. 1078413 -  -5.9  -5.04601   GCCAGAAACGAAAAA             CCCCCGC CAAAT ACGAGGG             TTAAGAATTAGTGGT  80 319
LQF52_RS04810 1074447 .. 1074465 -    -3  -5.08483   TAAAATGAAAGAAAA             CAGTACCC TGG GTGAACTG             CTGTGCTTCTCTCTG  76 486
LQF52_RS04800 1073200 .. 1073222 -   -12  -4.15565   TGCAGTACCTTAAAA           GCCCTGGCTA ATA TAGTCAGGGC           TTTTATCATTTGGGA  95 60
LQF52_RS04785 NONE
LQF52_RS04775 NONE
LQF52_RS04770 1068094 .. 1068113 -  -7.8  -3.17725   TTAAATCAGAGTGAA            TGGCGGTG ATAT CAGCGCCA             TTATTGATGTGGCTC  64 67
        cueP 1067335 .. 1067360 - -13.4  -3.61398   TTCCCCGTTGAATAA         GAAACCCAGC GATATA GCTGGGTTTC          TTATTCCGTGTTCGC 100 53
LQF52_RS04755 1065557 .. 1065572 -  -3.2  -3.56558   GAACATCAATGATAA              CGCACCC GAT GAG-GCG              ATCCCCATCCTGGCT  49 193
LQF52_RS04740 1063074 .. 1063086 -  -4.7  -2.95652   GGTACTTAAGTAAAT                GCCGC GTT GCGGT                TATCCATTCATATCA  48 124
LQF52_RS04735 NONE
LQF52_RS04730 NONE
LQF52_RS04725 1058710 .. 1058731 -  -5.9  -3.13403   TCTCGCGTAGGAAGA           CGGATTAAT GATA ATTAAACCG            TAGGATAATATTTTT  54 8
LQF52_RS04720 1057645 .. 1057663 -  -4.6  -3.25088   GGCGAAAGGCATCAA             GAAACC TAAAAAC GGTTTC             TTCTTACGTGCTGAA  49 479
LQF52_RS04710 NONE
        gudD 1054347 .. 1054383 - -11.5  -4.91429   AAATCTTAAATAAAA    CATCATCCCCCGCCGAC AGC ATCGGCGGGGGATTTTC    TCAACGAACCAGCGA 100 26
LQF52_RS04680 NONE
LQF52_RS04675 1046188 .. 1046215 -  -7.7  -5.26875   TGCTTAAGTAAAAAA        TACCGGCCTCT GTAAGA AGAGGCCGATT         GGATTATAGATTAAT  91 59
LQF52_RS04670 1043980 .. 1044002 - -16.3  -3.74872   ATGCATCGTATGAAA           CAGGCCGCC AATAG GGCGGCCTG           TTTATTTATGGGGCC 100 101
LQF52_RS04665 NONE
LQF52_RS04660 1040739 .. 1040767 -  -9.6  -3.02144   TGAGTGCGTTGAACA       GTGGCTTCC-CCG TCTC CGGTGGAAGCCAT        TTCACAGAAAACTAC  71 37
LQF52_RS04630 NONE
LQF52_RS04625 1031894 .. 1031906 -  -6.2  -4.07568   TTTCCTTGTTCAAAA                GGCG CGGAT CGCC                TGATAGTTGGCCCCT  68 151
LQF52_RS04615 1029654 .. 1029678 -  -6.5  -5.47159   CGCAACAAATAAAAA          CGTTAGTGC CTATTTC ACACTAACG          TTTATGCAACATAAA 100 77
LQF52_RS04610 NONE
        nrfD NONE
LQF52_RS04600 NONE
LQF52_RS04595 NONE
LQF52_RS04590 1023898 .. 1023916 -  -2.3  -4.93296   GCATCAGGATAAAAA             CGAACGG GATTT CCGTCAG             CCGATTGTGTCCGTC  72 303
LQF52_RS04575 1021336 .. 1021347 -  -5.8  -3.94877   ACGCGTTAATAATAA                TCGC CGTG GCGA                 TAGTCCCAGGTGGTA  63 4
LQF52_RS04570 1020373 .. 1020385 -  -4.8  -2.78463   ACTGGGCCTACGATA                CGCT GCGGG AGCG                CATTGTGAACCGCCG  45 107
LQF52_RS04560 1018857 .. 1018872 -  -6.1   -4.4648   AGGCCGATCACAAAA              GCCAC GGAGCG GTGGC               CGATGTGATGACGGA  73 68
        fumA 1016572 .. 1016594 - -12.7  -5.68438   GCATCAAATAAAAAA           CGCCCCGAC GAATG GTCAGGGCG           TTGTAGGTCGTAGAC 100 213
        norV NONE
        norW 1011963 .. 1011976 -  -5.3  -2.73681   CACTCACCCGAATCA               CTTAC CTGA GTAAG                CTCATCGGGATTCCT  49 224
        tehB 1010938 .. 1010955 - -12.7   -5.4433   ATAGAGAAATAAAAA             GGGCCGA GTAA TCGGCCC              TTTTGTATTTTATGT 100 84
        ubiK 1009420 .. 1009443 -   -11  -2.52896   CGAGTGGGGAATTGA          GCAACGCCCT GATT AGGGCGTTGT           ATCGCGATGATGACG  74 63
        cysZ 1005857 .. 1005878 - -12.3  -4.75289   CATTACAATAGAAAA           CACTGGCCG TTAT CAGCCAGTG            TTTACTGTCTTTTTA 100 38
        cysK 1004699 .. 1004714 -    -9  -5.24129   CTGTGCCACAAAAAA              GCACCT AAAT AGGTGC               TTTTTTAACACATTG 100 71
        ptsH NONE
        ptsI 1002291 .. 1002301 -  -2.4  -3.69094   AACCTATTAGGTAAA                 GCAG AAT CAGC                 AGAGCGTTTTTTCTT  49 21
         crr 1001576 .. 1001605 -   -13  -3.63968   CTGGAAAGCCTGAAA       CGAAAACGGCACC ATCCG GGTGCCG-TTTCG       TGCAAACGTAGTAAA 100 59
LQF52_RS04470  997936 ..  997958 -  -5.7  -3.35813   GGTCAGCTTAAGTAA          GGATGTAGAC ATGC GT-TACATCC           CCATCGGTGGGCCGG  56 18
LQF52_RS04465  995582 ..  995593 -  -4.4  -3.53444   CTACTGGCCCGGAAA                TCTG GCAG CAGA                 CGGCGGGCAAGCTGA  52 427
        hemF NONE
LQF52_RS04400  979342 ..  979380 - -10.3  -2.64099   TGTTTTTATGAGAAG  CGCGGGGATGAGGT-TCCC GTA GGGATACCTCG-CCCCGTG  ATCGCTCCGTGTATC  70 90
        rpiB  967348 ..  967387 - -10.8  -3.27602   GAACGAACAGTAAGA  CTGACGGCCAGCCAGTC TGGGGAT AACT-GCGGGCCGTCAG  ACAGGATTACCGATA  78 32
         tal NONE
         tkt  963946 ..  963999 - -13.6  -6.09133   TAGGCCAAAAAAAAA GACCAAAATAAAAATGCACCTC TAAAAAAGAG GAAATGCATTTTTACTTTGGTC TTGCCTGCCGAAGCA 100 247
LQF52_RS04340  961939 ..  961961 - -16.4  -4.24204   CAGGGAGACTGAAAA           GCATTGGGCA CCT TGCCCAATGC           TTTTATGGATCGTCA 100 38
LQF52_RS04335 NONE
LQF52_RS04330  959241 ..  959257 -  -2.3  -6.02919   GGACAAATAAAAAAA              GGTTATA AGT TATAAGC              GAGCGATTTTGTTAC 100 253
LQF52_RS04325 NONE
LQF52_RS04320  957214 ..  957225 -  -5.8  -2.64933   CATTCATTGAGAGCA                CGAC TTTG GTCG                 CCCGCCGATTCAGGT  50 35
LQF52_RS04315  956410 ..  956429 -  -4.2  -3.59024   GCATAAATAGCAGAA            CGTGCCCT AATT ACAGCACG             GTTGAGAAAAAGGCC  53 16
LQF52_RS04310  954654 ..  954670 -  -6.5  -3.30797   TCCAAATGTATAACA              CCGGCCA TTT TAGCCAG              CAGTGGCTGATTTTG  56 457
LQF52_RS04275  946458 ..  946494 -  -7.8  -3.25823   TGCCTGTTATATCAA    GCCCGGCTCCATTGCG CAGAT CTCGCTGGAGTCGGGC    TTTTTAGCGCGGCTG  64 44
LQF52_RS04270 NONE
LQF52_RS04265 NONE
        nadK  941723 ..  941756 - -10.5  -2.99273   GCCAGCATGATAAAC     CTCTGTATGTAATCA CCTG TGATTACATACAGTA      TAAACTGGTTTTATA  73 66
        recN  939946 ..  939972 - -11.6  -3.20322   GCCGATGATAATAGA         CCTTGCAGGACT TGG AAACCTGCAAGG         CGATTGTATGACCTC  81 107
        bamE  939394 ..  939429 -   -15  -5.60993   GCCCTTACAAAAAAA    CA-CAGGCAAACCTGAA GTG TTCAGATTTGCCTGCTG    TTATACCCGCTAGAC 100 162
        smpB  937949 ..  937963 -  -2.8    -3.484   GCCAGTATACCAGAA               CTTACC GTT GTTAAG               CCAGTGGCTTAGCGA  48 34
        ssrA  937490 ..  937512 -  -8.5  -5.76633   CCAGACATAAAAAAA          CCGCTGAACC TTGC GGTT-AGCGG           CTTTTTCACGTTTCC 100 72
LQF52_RS04215 NONE
LQF52_RS04210  936476 ..  936498 -   -15  -3.48593   GACCGCCTGAGATAA           CGAACCGAAT GTC ATTCGGTTCG           TTATAACCATATGAT 100 92
LQF52_RS04200  934938 ..  934972 -  -6.4  -2.65264   TCACCAGTGATAGGA     CGTAAATTGGATCGCG TAT CGTCATCCAGTCTACG     TTTGAAAAACTGACG  53 284
LQF52_RS04195  934009 ..  934038 -  -7.8  -4.08767   CTCACTTCGGCAAAA       TCACCCCGGC CTTGTGGTGT GCCGGGGAGA        GTCGTTGAGCATGAA  74 66
LQF52_RS04190  933201 ..  933221 -  -7.5  -3.37522   AGCCTATTTAATTAA            CGCGTTGAC GCC GCCAACGTG            GTGCCTGCCAGAATA  63 1
        nifJ  928021 ..  928034 -  -9.5  -5.94713   ACGCCATAAAAAAAA               CCGGC CGAA GCCGG                TTTGGAGCGGAACGA 100 41
        cybB NONE
LQF52_RS04165  926429 ..  926443 -  -2.8  -5.04733   GAATGAGAAAGAAAA               CCTC TTAGGGT GAGG               CGCGACTCAATTTTC  73 32
LQF52_RS04160  925156 ..  925187 - -18.9  -4.11404   GGGATAGTAGAGAAA      CGCGTTGGAAACC TGAATG GGTTTCCAACGCG       TCATAGACAATTACG 100 36
LQF52_RS04150  921984 ..  922019 -  -3.9  -4.02396   GAAACAAAAGGTAAA    GGCCGCACTCTGTCGC TGGGT GCC-CAGAGTGCGGTA    TATCTTGCGCTGCTT  58 51
LQF52_RS04140  919669 ..  919693 -   -13  -4.42062   GACGCGCTAAATAAA          TCAGCCCAAT ACGAG ATTGGGCTGA          TTGTTTTTAGTTGAT 100 100
         acs NONE
LQF52_RS04105 NONE
        actP  908251 ..  908274 - -13.8  -3.54488   GGGTTTCAAAGAAGA          GCTGGCCCGC GAAT GCGGGCCAGA           GAGAGGAAGATTAGT 100 36
LQF52_RS03975  871833 ..  871852 -   -10  -5.40464   TACCAGAAACAAAAA            TGGCTACC GGAT GGCAGCCA             TTTTATGGTGGTTAA 100 171
LQF52_RS03955  867324 ..  867351 -  -7.7  -4.14392   GTGCAAGCGCTAAAA        CGGG-GCGAAGC GGTAT GGTTCGCACCCG        ATCAGGACTACGGCC  74 415
LQF52_RS03945  865004 ..  865018 -  -2.1  -4.63527   TGATTATTTTAAAAA               CCAAC TTATT GTTGA               ACAAGGAAATATGCA  65 314
LQF52_RS03935  863336 ..  863354 - -10.3  -3.88731   TAAGATTATATTAAA             GGCCGAA TTATT TTCGGCC             TGATTTTTTTGAGCC  82 211
LQF52_RS03905  859560 ..  859574 -  -3.5  -2.74144   GTCGCACCGTCAAAC               CTGCG GTAGG CACAG               TCCCTGCCGGGCCAG  43 5
LQF52_RS03900  859232 ..  859249 - -12.7  -3.57561   GCTGAACCTTTTAAA             CCGGTGC CATT GCACCGG              TTTTTTTATGTTTAT  95 139
LQF52_RS03870  851304 ..  851316 -  -5.5  -3.05816   GTAGCCCCCACTGAA                GGGAC ATT ATCCC                AGGGACTGGTGACGC  52 19
LQF52_RS03865  850495 ..  850507 -  -4.8  -3.84183   TTGCAGCAGAAAACA                GGCA ATGGG TGCC                ATATTCGATGATATT  59 234
        fldB NONE
LQF52_RS03855  849469 ..  849501 - -14.9  -3.19602   CTGCGGATATCAATA      TTCGCGGATGCCGGT CAC AACGGTATCCGCGAA      TGTGTTACTCAATGG  95 30
        ygfZ NONE
LQF52_RS03825  844806 ..  844818 -  -3.3  -2.59267   CCGAATTATAGCAAC                CAGCC CTT GGCTT                TGGCGTCTTCCAGAT  42 3
LQF52_RS03820  843569 ..  843603 - -16.8  -3.76482   GGATATTAGTAAGAA     CTTAAACGTTTAAGTC ATC AACTTAAACGTTTAAG     AATTGTGATGTTGTT 100 159
LQF52_RS03815  841366 ..  841382 -  -4.3  -4.39166   TGCTATACAGCAAAA              CAGCTAG CTG CCAGCGG              TATCCGGCACCGCGG  66 12
LQF52_RS03810  839794 ..  839830 - -13.7  -3.62054   ACGTGAAATAAGGAA    GTCCCGCCCCGTTGA TATTGAC TCAGCGGGGCGGGAT    CACGTTAATGCGCAG 100 30
LQF52_RS03780  833141 ..  833155 -  -2.8  -2.70528   ATCATCTATATACCA               TCAAAG ATA CTTTGG               TAAATCACAATATAC  41 11
LQF52_RS03775  832208 ..  832221 -  -2.3  -3.65699   GCTATAAAGAATGAA               GCACG CGAA CGTGG                TTATGAGCAATTAAC  50 305
        fucO  825250 ..  825279 -  -3.4  -3.12351   TCCCGTGATAGCGAA       TGGCCACCCGCA GGGTAT CGCGGGTAGCGT        TGAGATATTTTCAAT  45 36
LQF52_RS03740  822935 ..  822966 -  -8.1  -2.85241   AAGATACAGTGAAAT      TTGTAACTCACCC TTGAAT AGGTGAGTTACAT       GATTGGATGTTAATA  61 35
LQF52_RS03715  818094 ..  818108 -  -2.9  -3.75505   CGTCAAAAATGATAA               TGATA ACTAA TATCA               TATAAGAATTTATAT  52 92
LQF52_RS03710  817354 ..  817374 -    -4  -3.47307   CCAACATCACTACAA            CGGTTC TGGTTTGTC GAACCG            AAGCAGTAAATCAGT  52 430
LQF52_RS03685  814769 ..  814779 -  -6.8  -3.21466   AATCCAGCAAGGCAA                 CGCT GGC AGCG                 AATGCGTTAGAAGGC  56 386
LQF52_RS03675 NONE
        rimI  813031 ..  813056 -  -8.9  -3.07113   CATTACGGCACCCAA         TGGCACCCGCC GAGT AGCGAGTGCCG          TAGGTAAAGAGGTTA  68 38
LQF52_RS03665  812296 ..  812323 - -10.6  -2.53213   CAAGGTTGGAATGCA        CCACACTCGATA GCCG TATCGGGCGTGG         TGCGTTCAACGACAG  65 80
LQF52_RS03660  811604 ..  811620 -  -2.9  -2.50816   GGCTTATTCATGAAT              GAACGGC CTG ACCATCC              GCGTCTATCTCCGCT  40 1
LQF52_RS03655 NONE
LQF52_RS03650 NONE
LQF52_RS03645  806179 ..  806205 -  -9.4  -2.93616   ACGAGTAATATCACA         TCAGCCCGGA CATCCGC TCCGGGCTGT         ATTTTTCTGTTTTTC  70 44
LQF52_RS03615  798962 ..  798975 -  -8.1  -2.89602   GGCGGTAGACGAAAG               CCTGC GTCG GCAGG                GCGTGGGGGAAAAGC  59 334
LQF52_RS03600 NONE
LQF52_RS03595  795927 ..  795942 - -11.8  -4.36914   GTGCGTTTGAGAAAA              GGGCGG CTGA CCGCCC               TGATAGGAAATGAGT  95 40
LQF52_RS03590  794733 ..  794749 -  -9.4  -4.67608   TACTGCAATACAAAA              CGACCC TGAAC GGGTCG              TTTTTTTTGGTCAGA  91 61
LQF52_RS03530 NONE
LQF52_RS03525 NONE
LQF52_RS03520  779247 ..  779286 - -12.3  -3.06831   GTAATCTGTAGCGAA  CGCTAACGAAGGTGTCCC GAATT GAGACACCTTCGTT-GAG  GAGCCCCTCATATAG  83 233
LQF52_RS03510  775148 ..  775165 -  -3.5  -3.14211   ATTGCCGCTGAGTAA             TATTGCT GCTG AACAATA              TTGCCGCTGAACAAT  46 50
LQF52_RS03505 NONE
LQF52_RS03500  773231 ..  773246 -  -4.7  -3.96148   CCCCTGGAGTATAAA              TACGC TTTTTG GCGTA               ATTACTTCTTGCTGC  59 27
LQF52_RS03495  772824 ..  772834 -  -2.4  -4.29508   ATCCAGAGGAAGAAA                 GGTC GAC GTCC                 TACGCCGTGAATATA  57 67
LQF52_RS03490  767194 ..  767229 - -15.4  -2.62184   TTCGGTTTTACATTA    GCGGCCGCCTTCGAGA TGCA TACCGAAGGCGGCCGT     TCCCTTATTCCTGCA  93 30
LQF52_RS03485  763045 ..  763077 - -12.8  -4.40358   ACTTACGTCATAAAA     TCGCCGTTCTGCGTT GGAA ACCGCAGA-CGGCGA      ATGTGTTATTGCCAT 100 31
LQF52_RS03480 NONE
LQF52_RS03475  761271 ..  761290 - -10.8  -5.49569   TACCAACATAAAAAA            TAGACGTC GATT GACGTCTA             TTTTTTTGTCTTTAA 100 58
        yhbY  755127 ..  755140 -  -9.5  -5.67711   TAAAGAAAAGAAAAA               GGCCG CTTG CGGCC                TTTTCTCTAACCGAG 100 89
        dacB  752438 ..  752450 -  -4.9  -4.28049   TTGAAAATGCCAAAA                TCATT ATC AATGA                GCTAGAGCAGTATGG  66 472
        ispB  748464 ..  748486 - -17.8  -2.71144   TAGTCTGGCGAACGA           GTAGCGCTGC AAG GCAGCGCTAC           TTATGAATCAACGAA 100 68
LQF52_RS03390  746958 ..  746979 - -14.5  -5.06414   GGCGTTGAATAAAAA           GCCGGAGAT TGAT ATCTCCGGC            TTTTCTTTTTTTAAT 100 36
        argR  744949 ..  744979 - -14.1  -2.51888   CTTTAAACGCAATAG       TCGCTACGTGTAG CGGAT CTACACGTAGCGG       AAAACGTAGTAAAAA  87 87
        rpsU  743385 ..  743411 - -12.3  -3.94823   TATAAACGACAACAA         GCCGCGCTTCC TTTCG GAAAGCACGGC         CTTACGTATGCAACT 100 89
        dnaG NONE
        rpoD  739510 ..  739531 - -14.5   -5.1287   CTGACAGGCAAAAAA           TAACCCCGG CGAA CCGGGGTTA            TTTATCGTAGGGCTA 100 70
LQF52_RS03350  738711 ..  738730 - -12.2  -5.56264   TTCAAATACAAAAAA            GCCACCTT GCGG AAGGTGGC             CTAATCATATGATTT 100 54
LQF52_RS03340  737119 ..  737143 -  -7.1  -4.86385   ATGCCCAAAAATAAA          GGAGCTGCGCT ATT AACGTAACTCC          TTAAATTTGGTGGCC  83 104
LQF52_RS03335  736443 ..  736460 -  -5.5   -3.4404   AAGAAAACGTCAGAA             TTGAGCC AACT GGCACAA              TTACCGTGAACGATG  53 281
LQF52_RS03325  734828 ..  734843 -  -4.6  -3.09516   TGTTTTACCACCTAA              CGCAAC TGAT GATGCG               GTGATTACGCCTTCG  49 30
        ascB  727700 ..  727727 - -12.8   -3.7791   CAACTATTCATTAAA        CCAGACGACG TGCGAATG CGTCGTCTGG         CTGTCTACCTGATTA 100 38
LQF52_RS03305 NONE
LQF52_RS03300 NONE
LQF52_RS03295  724327 ..  724346 -  -4.2  -5.14563   TTTCTGATCAAAAAA            CGC-CCATC CCA GTTGGCGCG            CCAACAGAATGTTCT  76 93
LQF52_RS03255  713533 ..  713545 -  -6.2  -4.07568   TGCGTGCGGTGAAAA                CGGG GTCGT CCCG                CTAAACTTGCCTAAA  68 41
LQF52_RS03245  711024 ..  711050 - -12.3  -5.48623   AAATAGAAACAAAAA         CGGCCAACATC GGAAG GACGCTGGCCG         CTTGTTATTAAAGCT 100 225
LQF52_RS03240  709999 ..  710030 -   -21  -2.81815   GTGAATGAGGAATGA      CCTCTCCGCACAGT TGGA ACCGTGCGGAGAGG       AGGGGGAAAGGATTA 100 38
        sstT  708458 ..  708489 -  -8.6  -3.17075   TTTCTCGTAATCTAA      CGCCGTTCGTTTTG AAGC CGATGCGAACGGCG       TGAGAGGAAAGGGGG  67 60
LQF52_RS03210  701569 ..  701581 -  -2.6  -2.85668   CAGTCGCAGATCATA                CCGG ATGAG CCAG                GATAATGCAGGGATT  42 42
        exuR  700574 ..  700601 -  -4.2  -4.56597   CCTTTGGTTCAAAAA        TTTCCCCCTGC GCCTAAA AC-GGGGGAAA        GGATGCATATTTAGG  66 36
LQF52_RS03200 NONE
        mzrA NONE
LQF52_RS03190  698516 ..  698538 -  -3.4  -2.86338   AGCCATATTAATAAC           CCTTCATGTT ATA AACCTGAACG           TTAACTATAGCTGAA  44 168
LQF52_RS03185  698194 ..  698207 -  -4.5   -2.5547   ATCTGTCATAGCAAT               CCGCT AATT AGCGA                CGAGACAGCAGGACG  46 19
LQF52_RS03180 NONE
LQF52_RS03175  697464 ..  697481 -  -2.7  -3.78436   AAGTCAGATGAAGAA             TGTCTTA TCGA TAAGGCA              GATAGCCGAGGCGAT  52 49
LQF52_RS03170  696759 ..  696785 - -13.8   -3.2812   GAGTGATGATAAAAC         GACGGCAAGC CTTGTGT GCTTGCCGTC         TAATTCATTATTCGA 100 76
LQF52_RS03165  695391 ..  695408 -  -8.3  -2.89564   TTGCGATGGCAGATA             CCGCGCG CGAA CGCCCGG              TACTGACCGTGCAGC  59 350
LQF52_RS03155  693905 ..  693920 -  -3.2  -5.11063   ACGACTGAATAAAAA              CGCC GAACTGGT GGCG               TTTTCCTGCAAAAAC  74 71
         zur  693319 ..  693339 - -15.5  -3.24232   CTTCGCTGAAAGAGA            CGATAGCCC TCA GGGCTATCG            TTTTTTAATTGGAAC 100 20
        plsB  688651 ..  688668 - -11.3   -5.4492   GACAGAGACAAAAAA             GCAGCGA TTTC TCGCTGC              TTTTTTTATGGTGGA 100 128
        aspA  682284 ..  682313 -  -8.6  -5.05153   ACGGCAAAAAATAAA       GGCACG-CTGTTC TTCGT GAACGGACGTGCC       TGTTGGAATTAGATG  91 47
LQF52_RS03095  680860 ..  680888 - -13.9  -2.78712   GTTTGAAGGGAATGA        CGCGGATCGAC GAGCTAA GCCGATCCGCG        AGGGACTGTCAGGAA  86 49
        cutA NONE
LQF52_RS03085 NONE
LQF52_RS03080  677624 ..  677637 -  -3.8  -3.24825   TGATTTTAACCAACA               GCCA GCGCCA TGGC                GTGAGAAACACGCTA  47 517
LQF52_RS03065  676264 ..  676290 - -13.1  -4.15197   GAAAGACGAGAGAAA         CCAGAGGCATC TAGAG AATGCCTCTGG         TTCTTAAGTCCCGTA 100 149
LQF52_RS03050  672882 ..  672900 -  -3.1  -2.57963   TGTATAACGAGTAAT             TTCGATC ATTCA GATCGAC             TACGTTTATGTATTG  42 12
LQF52_RS03045  671758 ..  671779 -  -2.9  -4.25256   TTTTGACGAAAAGAA           CCCTGGTGC TGGT GCACCATAA            AATACAAAGATGATT  58 49
LQF52_RS03040 NONE
LQF52_RS03035  669653 ..  669665 -  -3.3  -3.16564   TGGTCATTTCATTAA                GCCTC AAA GAGGG                ACGCCATTAACCCGT  46 62
LQF52_RS03030 NONE
LQF52_RS03025 NONE
LQF52_RS03020 NONE
LQF52_RS03015  667195 ..  667206 -    -3  -3.75738   CAGCAGCAGTAATAA                TACT AAGT AGTA                 TAACTCCTATCATTC  52 35
LQF52_RS03010  666062 ..  666091 -  -9.3  -5.00616   TGGCGGCTTAAAAAA       CAGAAAGCACTCC TTCG GGGGTGCTTTTTG        CTATGTAGATGAGGT  93 104
LQF52_RS02930  653617 ..  653657 -  -2.3  -3.92542   TCCACGGGGAAATAA  GCCAGTGAGCGAGCCCC AATCAAG GGGGCTGGCGAACGGGA  GCGGTCGGCGAGTGT  53 81
LQF52_RS02920  651769 ..  651805 - -13.4  -4.62336   ATCTTACGGTAAAAA    TAAAGTTAACTGTATA GAATG CATACAGTTAACTTTA    CATTACCAGTTATCA 100 28
LQF52_RS02885  643234 ..  643260 -  -4.5    -3.254   TAGGTATTTACAATA        CGTTACACCACT CTCG AGTTGTG-AACG         ATGAATTGGTTGAAA  49 222
LQF52_RS02735  615625 ..  615638 -  -3.1  -3.35015   GCAAGGAGCTCACAA               GC-GGT TCA ACCAGC               TTTAATGATGAACAT  48 17
LQF52_RS02730 NONE
LQF52_RS02725  614374 ..  614395 -  -2.9  -3.52896   CGATCAGTGATACAA           CTGGCCTGA TAGG TCATGACAG            CACTGGAGCCATACT  49 305
LQF52_RS02560 NONE
LQF52_RS02555  584014 ..  584026 -  -3.4  -4.62302   TAACAGGGCTAAAAA                TCCA CATTT TGGA                ATAGGTTTTTCGAGA  66 170
LQF52_RS02545  582315 ..  582327 -  -7.7  -4.06633   CATAAATGTAAATAA                CCGTT TAA AACGG                TGTAAATGGGGACGG  74 288
LQF52_RS02535  579991 ..  580009 -   -16  -3.56347   ACACCTGAAATAACA             GGGGCAGC GGT GCTGCCCC             AATAATACTATGCCG 100 79
LQF52_RS02530  578955 ..  578982 -  -3.2  -2.87211   AGCGGTGCTGACAGA        CGTTGGCGTAGT ACTC ACCTCGCCTCCG         AAAACTGTGCCGTTC  44 12
LQF52_RS02525 NONE
LQF52_RS02520  575477 ..  575499 - -12.1  -3.05384   CGCTTTTCTACGGAA           TCTGGAGCA TCTCC TGCTCCAGA           TATTAGTTAAGGCAG  81 68
LQF52_RS02515  574170 ..  574184 -  -2.8  -3.80461   GAAGTCATCACTAAA               TACGGA CTA TCGGTA               CGTTTGCCATTGTGC  52 149
LQF52_RS02510 NONE
LQF52_RS02505  561444 ..  561466 - -19.2   -3.2614   GACGTCTGACAGTAA           GAGGGGCAGC GCT GCTGCCCCTC           TTACTCGCGTAAAAC 100 71
LQF52_RS02465 NONE
LQF52_RS02460  541579 ..  541594 - -11.8  -5.00616   TCTGCTGCTAAAAAA              GCCCGC GTTA GCGGGC               TAGAGTCATTAAGCA 100 54
LQF52_RS02420  533549 ..  533570 -  -5.7  -2.71325   TGAGGTAGAAAGCGA           CACGCAGCC GGAC AGCGGCGCG            GTAGTGAAAAAAGAC  50 116
        serB NONE
        radA NONE
        nadR NONE
LQF52_RS02380 NONE
        pepP  525536 ..  525547 -  -5.8  -2.71712   GTTGCCCTTTGAAAG                CGCT GCTT AGCG                 TTGCTTAGCGTTGCT  50 30
        ubiH NONE
        ubiI  523036 ..  523055 -   -15  -3.37071   AAACGTTATTGATAA            CTCGCCGC TTAA GCGGCGAG             CTTTGTTATCTATTC 100 49
LQF52_RS02360  522157 ..  522185 -  -4.6  -2.53263   CTCATTTTTAAGCCA        CAACGCTATTCA CTCAT TCATTAGCGTTG        TTCCTTGGATAAATC  46 17
LQF52_RS02355 NONE
LQF52_RS02350 NONE
LQF52_RS02345  520909 ..  520938 -  -7.7  -2.87931   CGGATGCCTGATACA       CTGGACTCGCCGC TGCG GCGGCGAGTTTTG        CACTCGACAGAGTAT  61 42
        rhaT NONE
LQF52_RS02325 NONE
LQF52_RS02320 NONE
LQF52_RS02315  516301 ..  516316 -  -6.8  -3.08314   TCCAACCGTCAAAAT              GCCCTC TTCA GAGGAC               GCATCATAATAGGCT  58 212
LQF52_RS02305  515292 ..  515314 -  -5.5   -3.3334   AAGTCCATTCCAGAA           CGCCTTAAG GATCT CTCAGGGCG           TTTTTGTTTTCCTGG  56 99
LQF52_RS02285 NONE
LQF52_RS02280 NONE
LQF52_RS02275 NONE
LQF52_RS02270 NONE
        yefM NONE
LQF52_RS02260  506946 ..  506963 -  -2.6  -4.00532   GCTTTAAAGAGCAAA             CCGGCA TGAGCG TGCCGC              ATTACCTGCGCCAGC  54 250
        rhaB NONE
LQF52_RS02240 NONE
        rhaD  501432 ..  501455 - -15.3  -3.28924   TAGTCGTTGGCAGAA          CGCCACGGC GGTGAG GCCGTGGCG           ATTTTAGGCTGAAGC 100 82
        rhaM  501041 ..  501081 -  -4.1  -4.17316   ATGCCTTCAAAATAA  TGTTACAGCGGTAATAC TTTAATT ATATTACCGCTGCACGA  TTCTCCTCAGTCCAG  62 32
LQF52_RS02225  499007 ..  499048 -  -5.7  -4.18702   AGAAGTGCTAAGAAA CTGCTTGTTGCCCCGCCGA GTGG TCGACGGGGCAAAGGGGAA  TTAATGAATTCTCAG  67 26
        mgtA  495890 ..  495905 -  -2.5  -3.45434   AATAAGGGATCAGAA              CCACT GGCCGA AGCGG               CGGATATAGGCGCGT  48 4
LQF52_RS02215  493312 ..  493324 -  -4.9  -4.78848   TTTGGAAATATAAAA                TAGAT TTT ATCTA                CATTAACCCAATATA  75 199
LQF52_RS02210 NONE
LQF52_RS02205  490747 ..  490764 -  -9.1  -3.21099   CCTCGCGATTAGCAA             CGCCCTC CACT AAGGGCG              TTGCTGTCATGTATG  70 53
LQF52_RS02185  486614 ..  486626 -  -6.2  -3.66999   ATGGATGCATTGAAA                GCGC GGGCG GCGC                GAGGTGAGTTGTGAT  62 347
        rtcR  481065 ..  481087 -    -8  -3.03124   GCCTATCCGTTAAGA           TATAAATTTA GGA TAAATTTATA           CCCGCTTCAACCCCT  62 21
LQF52_RS02150 NONE
LQF52_RS02145  480150 ..  480180 -  -9.1  -2.81133   CACGGAGCCACCAGA      GGGGTGAGGCCTTCC TGC GGAA-ACCTC-CCCC      TGTGTTTCCCCTAAA  66 133
LQF52_RS02140  479277 ..  479287 -  -3.2  -4.56775   AGTGCTGTTCAAAAA                 CATC TCT GACG                 TTTTTGTCCTACGCG  64 186
LQF52_RS02135  477431 ..  477453 -  -8.6  -2.60512   GGTAACACGAACCCA           TCACGATTTT TAT AAAATCATGA           CTAAAAAGCGTTCTC  63 333
        aspA  475836 ..  475857 - -13.7  -3.56568   TAATGAGTCGGCAAA           GGCCCGGAA TGTA CTCCGGGCC            AGCGTGACAGAAAAC 100 46
LQF52_RS02125 NONE
LQF52_RS02120 NONE
LQF52_RS02115  472011 ..  472025 -  -2.1  -3.07113   GATGAGTTTAGCGAA              GGTCAG CATG CTG-CC               TCCTTGTCACCTGGC  42 13
LQF52_RS02110  470716 ..  470744 -   -14  -2.55446   TATAAAGGCATGAAC        CACAGTGAAACG GTTAA CGTTTCACTGCG        TAATTCGGCCCCTTT  81 107
        pepA  463003 ..  463021 -   -16  -3.38768   TTACACTATTGATAA             GGGCCGGA ATA TCCGGCCC             GATAGACAATTACCT 100 93
LQF52_RS02070 NONE
LQF52_RS02065  459592 ..  459611 -   -10  -5.67711   CAAATAAAATAAAAA            GCCCCGTT TTGC AACGAGGC             TTTCGTATTTACCAT 100 66
LQF52_RS02060  458656 ..  458670 - -11.4  -2.66964   TTATGGATGAGATCA               CGCTGG CTT CCAGCG               AGCAGAGTCGCGGCA  68 338
LQF52_RS02035  452004 ..  452025 - -12.9  -4.18197   ACGCCTCACTGAAAA           CGCCGCCGG AACC CCTGCGGCG            TTTTTTATTCGGTAT 100 72
        argF  450333 ..  450362 -   -13  -4.09243   TAGACCGCCGGAAAA       TCTCTCCCTCCCC GCTCT GGGGAGGGA-AGA       AAGCCTTAGTCCTGA 100 31
        pyrB NONE
        pyrI  447946 ..  447976 -   -11   -5.1101   CCATTATTCAAAAAA       GCCCCGCTACAGGC AAT GTCCATTGCGGGGC       AACGCGGAAAACTAG 100 37
        ridA  447461 ..  447478 - -12.7  -5.86465   AAGAACAGAAAAAAA             GCGCACG GGTT CGTGCGC              TTTTTGGGGATATTG 100 50
        nrdD  444937 ..  444958 - -11.5  -2.71791   ACGGTGCCGCGAAAG           GGGGCCGCA TTGC TGCGGCCCG            GAAGGGATCACCCCA  77 33
        nrdG  444044 ..  444070 -  -5.9   -4.3534   GTGGAAGGATCAAAA        GTGGCGCTGGCGC TGG GCG-CAACGC-AC        CTGTTGGTCGTCAGT  71 376
LQF52_RS01975  441318 ..  441330 -  -4.1  -3.14132   TGGTCCTTTTATCAA                GAAAC GTT GTTCC                GCTATCACGATGGTG  48 30
LQF52_RS01970  439763 ..  439784 -  -8.7  -3.85184   TGCAAAATACCGAAA           GCCTACAGCG TGC CGCCG-AGGC           GCTGAACCGCTTTCA  73 172
LQF52_RS01960  438009 ..  438026 -    -7  -3.53224   CAGTTGTGGTGTAAA             GAGGGA TACGCT TCCCTC              CTCAATATGTCGTTG  62 27
LQF52_RS01955  437354 ..  437382 -    -6  -3.87815   GGGCAGTCGGAGAAA       GATGT-TCCCCGC GCGA GCGGGGATAAACC        GCGGGATGCATGGGG  66 226
LQF52_RS01915 NONE
LQF52_RS01910  428640 ..  428653 -  -3.7  -4.83169   ACGGTGCGATAAAAA               TGCCG GAAG CGGCG                CGACAGCTGATCAAC  72 498
LQF52_RS01895 NONE
LQF52_RS01890  422719 ..  422734 -  -3.2  -3.47227   GGCCAATTATCAGAA              CCAGGT TTCC ATCTGG               ATACCGAAGTTCCAT  50 4
LQF52_RS01885 NONE
LQF52_RS01880 NONE
LQF52_RS01875  418688 ..  418713 -  -6.7  -3.53224   TAGTCGGTGCGGAAA         CCGCTGCCGCT AAAT AACGGCTGAGG          GTTGTGTTGTAAGAA  62 125
LQF52_RS01860  415544 ..  415569 -  -9.9  -3.98627   TGATGAAGATAAGAA         CGGGTAAAT-AC ATC GTGATTTACCCG         TATTTTTATCGGTTA  81 38
LQF52_RS01855 NONE
LQF52_RS01850  413652 ..  413690 - -12.6  -3.71148   GAAAATGCAGGGAAA  GTGCCATGTTGTTCTGC ATTGCG GC-GAACAACATGGCGC   AATTGGGTGTGCGTT  95 39
        metC  412020 ..  412050 - -12.6  -3.06073   TATATGGGGCAAAAC       GCCTTGCCGCAT GATGAGA ATGCGGCAGGGC       TTAATGCTTAATTTT  83 224
LQF52_RS01840  411109 ..  411139 -  -8.9  -3.11726   AAGACGTGAAGAAAG       CGTGCCGTTGCCC GATTT AGGCGACCGCACG       TTTTTTGCGCCACAC  68 11
LQF52_RS01830 NONE
        yqhD  407828 ..  407845 - -12.7  -3.96148   TTGCCTGATGATAAA             GGGAGCC GGTT GGCTCCC              TTTAACAGACACAGC 100 124
        dkgA  406790 ..  406818 - -13.2  -3.84406   TGCCGATTAGAAGAA        CAATGCCAGCCC GGTGA AGGCTGGCATCG        ACGGTGGCTTAGCTC 100 41
LQF52_RS01780  396529 ..  396558 -  -5.7  -5.50723   GGAGGAAAATAAAAA       GGCAAGAAAGC CGTGGTGT GCGCTCTTGCC        TGAGTGGTGGCGATG  93 87
LQF52_RS01775 NONE
LQF52_RS01770 NONE
LQF52_RS01765 NONE
LQF52_RS01760 NONE
LQF52_RS01755  391738 ..  391750 -  -3.4  -2.91276   CTGTGTCGGATAAAG                GGAA AAGCG TTCC                TGTACCAGTGGCTGA  44 75
LQF52_RS01750  390806 ..  390828 -  -8.4  -4.13767   GCGGGTAGGGTAAAA           GGCAAGAGCA TCC TTCCCTTGCC           TTGTTCAGAACGTGT  78 47
LQF52_RS01745  389657 ..  389672 -    -4  -4.07687   AGCGCTTCCCTAAAA              CGG-ACA GGA TGTACCG              TAAAAATGCGCGAGA  60 419
        tolC  381453 ..  381470 - -11.3  -5.24129   CGCGGGTATAAAAAA             GGGGAAC CGTG GTTCCCC              TGTATTTGATGCGTG 100 57
LQF52_RS01700  380553 ..  380563 -  -2.4  -3.08679   CCGCTTCATTCAATA                 CGCC TCA GCCG                 CCCATGCTACGGGAA  42 19
LQF52_RS01695  379134 ..  379153 - -13.6  -3.32769   GGTGGAAATGAGTAA            GGCACGGT TCTC ACCGTGCC             TTATATATTCGTCAT 100 258
LQF52_RS01665  374048 ..  374072 -    -2  -3.53012   CCTGTTGTTCGTAAA          CTGCGCCAGC CGCTC GCTGATTCAG          AGAACGGGCACCAGT  47 22
LQF52_RS01660  373695 ..  373709 -  -4.2  -3.34404   CCATCAAGGATAAGA               TACCCC TGA GTGGTA               AAAATGTTATCCCTG  50 32
        diaA NONE
        dolP  372429 ..  372450 - -14.5  -5.72616   ATCGAGATAAAAAAA           CCGCTGATG TTTT CATCAGCGG            TTTTTGTTTTTTAAA 100 53
        gltB NONE
LQF52_RS01615  359102 ..  359119 - -12.7  -5.26119   GGCTGAAAAAGAAAA             GGGCAGC TAGC GCTGCCC              TCAAGAGACGAGATG 100 46
LQF52_RS01605  357387 ..  357406 -  -2.1  -2.87274   TCTGATAATGAACCA            CCACC GCCGCCTAAA GGTGG             CCGACCGTCGCTACG  40 112
LQF52_RS01580  352536 ..  352579 -  -4.6  -3.41798   CTCTAAAATAATATA GTGTGGTTTTCCTTTGTCGC AGTG GAGAGAATTAAAAACCACAC GTTGACTTATCGATC  52 69
        idnD  351327 ..  351353 -  -7.4  -4.84527   GGCACACACGAAAAA         TCATTTCCAGAC AAT GTGTGGAAATAA         TTAATCGATAGAATA  83 138
LQF52_RS01570  349862 ..  349880 - -11.7   -5.1848   AATCAATGCAAAAAA             CCCGGTG CTGGT CACCGGG             TTTTTTTATGTCTAG 100 69
        zapG  346937 ..  346959 - -11.3  -3.67285   ACAAGAGAGGGGAAA           GCGTGAGAC AGAAA GCCTCACGC           TAGGGGAAACTGAAT  87 40
        degQ  345263 ..  345291 - -10.3  -2.67188   GGATATCACGAGAAG        TTCGGACACCG CATGGCT CGGTGTCCGAT        TTTTTAACATTAGCG  70 81
        degS  343936 ..  343960 -  -7.2  -2.80935   ATCGTATTTATCACA         TCGATCGCGGC TATG ACCGC-ATCGA          AGATAAGCTGCGTGC  55 178
LQF52_RS01500 NONE
        kdsD NONE
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB  334336 ..  334346 -  -3.2  -3.03085   AAAGATAAAATATTA                 CCCT ATC AGAG                 TCGGAAGCCTTCGCC  45 20
        rpoN NONE
         hpf NONE
        ptsN  331804 ..  331823 -  -4.3  -3.37975   AGCGACCACTGACAA            TCATCAG CACCAT CTGACGA             CTCCCCTCTGGCAAC  52 179
        rapZ NONE
         npr  330517 ..  330549 - -10.6  -5.02502   CAGATGATATAAAAA     TA-ACCCCCCGCACC CAAA GGAGCAGGGGGTATA      AGAAAATATTATGAT 100 131
         rnk  330024 ..  330036 -  -4.7  -3.14132   GCTCTTCGTGAGTAA                CCGTC GCC GTCGG                CAGTGTCCGACGGCT  50 58
LQF52_RS01435  327776 ..  327809 - -12.6  -3.04461   GAGCTACCGGTAATA     CATGGGATGAGTGAG GCATA CTC-CTCATCCCACG     ATCGCCGTTAGTCTG  83 33
        aaeR  321644 ..  321668 -  -9.3  -3.72576   GTGTTTTGTATGAAA          GAGGGAAACGC CTC GCATTTTCCTC          TTTGCAAAACCTACT  77 36
LQF52_RS01405 NONE
LQF52_RS01400  320520 ..  320548 - -13.9   -5.0133   GAGGGCGGTAAAAAA        GAAGCCGCAACGT TAC ACGTTACGGCTAC        CTTCAAAAGCTTAAC 100 105
LQF52_RS01350  305500 ..  305514 -  -7.1  -3.58269   CAAGCGACGTTCAAA               GGCGT TCCTG ACGCC               TTTGTCCCTGTCGCG  67 108
        msrP NONE
        msrQ  303339 ..  303351 -  -3.4  -4.36914   CCGTGTCGCACAAAA                TAGC GCGAA GCTA                TTCGTTTGTCACCTT  62 213
        aroQ NONE
        accB NONE
        accC  300945 ..  300962 - -12.7  -4.63048   GGCATAAATAACAAA             GGCCAGC ATAG GCTGGCC              TTTTGACTCGATTGC 100 48
LQF52_RS01315 NONE
        panF  298132 ..  298142 -  -2.4  -2.53876   TTTCAGTTGAATCCA                 CGGC ATA GCAG                 TCTCTATTACATTTA  39 38
        prmA  297203 ..  297229 -  -9.4   -2.5638   TAGCAAGAAGAAAGG         TGCCCACCGT TGCACAT ACGGTGGGCG         GGACTCGCGGGGTAA  68 46
LQF52_RS01300  296050 ..  296064 -  -6.4  -3.83998   TTACGTCAGATGAAA               GGCCAA ACT TTGACC               AATTTACAGCTATCG  64 301
        dusB NONE
         fis  294642 ..  294669 - -11.3  -5.33026   GAAGGCAAAGAAAAA        GGCGCTTAACC AAAAGA GGTAAAGCGCC         TTTTTTCAAATGCTT 100 53
LQF52_RS01275  293824 ..  293843 -    -5  -2.64416   TAGTTGTAGCACAAC            GATTAGTC TCTG GACTCATC             TTTAGGTTGTTTGCG  48 8
LQF52_RS01270  292688 ..  292702 -  -2.7  -4.42788   GCGAAGGCGACAAAA               GCCTG GCTTT CTGGC               GTGAAGGCCATCAGA  64 416
LQF52_RS01255  289969 ..  289979 -  -8.2  -2.95906   TACAAGGCCATAAAT                 GGGC CTT GCCC                 TAAAGGGTCAACGCA  61 139
LQF52_RS01250  288985 ..  288997 -  -6.9  -3.53019   TGACAAATGCAAAGA                GGGCA GTG CGCCC                TTTTTTGGTGCGTCA  62 172
LQF52_RS01245  287736 ..  287750 -  -3.4  -3.44146   TTTTCTGATAATTAA               CGTACC GCT GGCGCG               TACTGGATCCCGCCT  50 7
LQF52_RS01240 NONE
LQF52_RS01235 NONE
LQF52_RS01230  284352 ..  284373 - -10.1  -3.62518   TCAAACACGTGGAAA           GCCTCTGTC GAAA GACAGGGGC            TTTTTGCTATGGGAT  78 266
        purH NONE
        purD  275634 ..  275649 - -10.4  -5.24129   TCTGGCTATAAAAAA              CCCGGA TTTC TCCGGG               CTTCAGTATTTATCA 100 68
LQF52_RS01165  270302 ..  270320 -   -11  -2.50252   ACTCCGACAAGATAT             GCCCGTCT CTT AAACGGGC             CAATAAAACCCCTAC  74 130
        thiC NONE
        thiE NONE
        moeB NONE
        thiS NONE
LQF52_RS01140  265647 ..  265658 -  -2.2  -2.72263   AGACGGTTTGGAAAT                CGAC GTTC ATCG                 CTCCGCCCCTTCCGT  40 20
        thiH  264066 ..  264085 -  -2.8   -4.4009   CGTGAGGTCAGAAAA            GCAGGCAT ACAG ATAGCTGC             GGGTTCGCTCTTCTC  64 475
LQF52_RS01125  262365 ..  262401 - -13.1  -2.56596   CGCCTCACCAATCTA    GCGTGCCGATACAGATA CAG TGTTTGTATCGGCACAC    TTCTACTGTTTTTTG  84 62
LQF52_RS01050  245563 ..  245576 -  -3.1  -4.70169   TCACAGGTAAGAAAA               GGGACT CTC AG-CCC               AGCGAAGAAAACGGG  66 189
        coaA  244543 ..  244557 -  -8.5  -5.24129   GCGGTGCATAAAAAA               GGGGG GGATT CCCCC               TTTTACATATTCGGT  95 46
        trmA  232380 ..  232396 -  -6.5  -4.36914   CTGCGCCGCAGAAAA              GAGACGG ATA CCGTATC              CGCAGACGAGAGCGA  73 91
        sthA  229645 ..  229658 -  -5.9   -3.1996   TAAACCGGAACCCAA               GCGCA CTAT CGCGC                TGGTGTATCGCCCCG  54 118
        metJ  216612 ..  216631 - -12.1  -4.34402   CTCTGCATAGCAAAA            CCCCGCC GGGGGA GGCGGGG             TTAGCAAGAAAATCG  95 56
LQF52_RS00920 NONE
LQF52_RS00915 NONE
LQF52_RS00910  213602 ..  213648 -  -8.3  -2.87243   TTACTACGATAACGA TAACTCCAATAACTCCA TCTGGCAATATTT TGGGGTTATTGGAGTTA TTTTTAAACCTGCAT  65 44
LQF52_RS00905  213367 ..  213379 -  -3.3  -3.62613   ATAAAACATAATTAA                GCCTC TTC GAGTC                AGCGATGATCATATT  51 34
LQF52_RS00900  212906 ..  212921 - -10.4  -3.54459   GTAACTTTCTGCAAA              GGCACC TACA GGTGCC               TTTGTTGTTTCTGGT  77 54
        priA  210187 ..  210202 -  -2.4  -3.11732   CCCAAACGTAGCTAA              CCGTCC GTGG GGTCGA               CATCCAGCATCCATT  42 6
        cytR  208784 ..  208794 -  -2.6  -4.15061   GAATTGATAGATAAA                 TAAT ATA ATTA                 GGGGGTCATGTTACT  56 74
        ftsN  207867 ..  207889 -  -9.9  -3.57119   TATAGATGGGGGAAA          GCGTGGGGTT TTTC AACCCC-CGC           TGGCAAGAGGAATAC  77 15
        hslV NONE
        hslU  205869 ..  205890 - -15.9  -4.99043   GCGTCAGAAACAAAA           GTGGGAGGC CAAC GCCTCCCAC            TTTATCGTTAATCGT 100 59
LQF52_RS00865  204791 ..  204812 -  -2.3  -4.07568   CGGCTGTTGGCAAAA           TCATCAAAT GTTA ACTTGATGC            GTATCAGTAAATACG  55 74
        rraA  204177 ..  204191 -  -8.5  -5.65927   GAGCCAAATAAAAAA               GGGCG TGTAT CGCCC               TTTTTTGTGGTGAGG 100 75
LQF52_RS00850 NONE
        glpK  200862 ..  200884 - -16.3  -4.70659   GGCGATAGGGAAAAA           TCGGGCGCG ACAGG CGCGCCCGA           TGTGGATAGATGAGT 100 48
        glpX  199615 ..  199632 -  -4.1  -3.64049   TTAACAACTGTGAAA             CAATCAG TCTG CCGATCG              GTGGTCAGCTACAGC  53 34
         fpr  198370 ..  198382 -  -4.7  -3.53012   TGCTTCTCGTTTAAA                GGCCG AGT CGGTC                GTCGTGATTTCTGGC  52 420
LQF52_RS00825  197411 ..  197448 -  -2.7  -2.95668   AACCGATGCATAAAT   TTTACTGCCGTCAGG-CA ATA TGACCTGCCCACAGTATA   GAGACGAAATGTGAC  42 77
        tpiA  196497 ..  196523 -  -8.7  -5.24129   GCTCGCTATAAAAAA        GCCGGTT-GCGC GACA GCGTGAACCGGC         TTTTTATTAGACGAA  95 69
LQF52_RS00780  188067 ..  188105 -  -4.4  -3.03159   CGAATGTCGTCAATA   GGCTGCCGATTGCCGTGA AAT TCACGGCAATACGTGGGC   TATAATCTTTTGGGG  49 49
LQF52_RS00775  185718 ..  185734 -  -2.3  -3.14132   CGTCGGCGTGAGTAA              GTCAT CTTGTCC ATGAC              GTTAGCCTTTGAAAT  44 27
LQF52_RS00770 NONE
LQF52_RS00765 NONE
LQF52_RS00760  182349 ..  182380 -  -7.2  -2.79803   CAAGCTGATTGAAAC      TTTTGTGCAGGTCG ACAG CGACCTGCACGGTA       CACCTGTGGCGCTTA  55 38
        cpxR NONE
        cpxA  162474 ..  162496 - -15.6  -2.79017   ATAAACAGAAAGTGA           CAGGTGCCCA TGT CGGGCACCTG           AAAGCGTGTTATAGA  93 77
LQF52_RS00685 NONE
LQF52_RS00680  159242 ..  159259 -  -9.1  -3.59979   TGTTTGGATCGGAAA             CGTCCGG CCTG CCAGACG              AGATTCGCAACGGCT  68 176
LQF52_RS00670  158195 ..  158206 -  -4.4  -3.78953   ATTTGTACGATCAAA                CTGT TGGT ACAG                 CCGCTGGTGATCTGG  58 261
LQF52_RS00610 NONE
LQF52_RS00605  148553 ..  148567 -  -5.7  -4.07568   GCTGTGTCGGGAAAA               CCGAT CCTGC ATCGG               CGAAGCGGTGGCGCA  67 347
LQF52_RS00595 NONE
LQF52_RS00590 NONE
LQF52_RS00585 NONE
LQF52_RS00580  144014 ..  144056 -  -3.3  -2.62958   TATTTGAAGAAAAGG GTGACCTGATTCCCGCATC GGAAT AATGCGGGAACCTGACCTT TTCTCGATATTTTAT  42 98
LQF52_RS00575  142536 ..  142557 - -12.3  -3.27022   TTTAGTTGATACCAA           TGGGGAAGC CGCC GCCTCCCCA            TTGTGAAATTTCACG  86 44
LQF52_RS00570  140371 ..  140385 -  -2.1  -3.27475   TTCTGCACGACAAGA               GCAAT GTACG ACTGC               GGTTTCTAAATCCTT  44 224
LQF52_RS00565  138593 ..  138610 - -11.3  -5.47821   ATCTATTGAAAAAAA             CCGCTGA GCGA TCAGCGG              TTTTGGGTTTCTTTT 100 50
LQF52_RS00560  136085 ..  136112 - -17.2  -3.72027   ATCCCTGAGCAATAA        TAAAGCCGCTGA AGCG TCAGCGGCTTTA         TTTTTTGCGCTACGT 100 72
LQF52_RS00555  133863 ..  133880 - -11.3  -5.09426   GCTAATGTGAAAAAA             CCGCTGA TATT TCAGCGG              TTTTTCTTTTTTAGC 100 63
        panM  126554 ..  126568 -  -3.5  -3.14881   GAACTGGCCGATCAA               TACGG CGTTT CCGCA               GAGCGTGTGCGTCAG  45 172
        rsmD NONE
LQF52_RS00490  120557 ..  120568 -  -5.8  -4.39571   CCGAGAAACTGAAAA                CGGA ATTC TCCG                 GCGTTAGCCGCAGTT  73 522
LQF52_RS00475 NONE
LQF52_RS00470  116844 ..  116859 -    -4   -4.4017   CCAACCCGGATAAAA              CCCT-TG ATG CACAGGG              GCTGCGCTGCCCTGA  66 281
LQF52_RS00460  115874 ..  115892 -  -8.8  -4.46926   GACTTGATGAGAAAA             GGCGGC GTAAATA GCCGCC             CGATTGGCATTAATG  87 35
LQF52_RS00455  114982 ..  115005 - -15.4  -4.00486   CGTATAAGAGAACAA          CAGTAGCCAC CTTT GTGGCTACTG           TCAGACGATAACGCC 100 43
        yhjD  112361 ..  112373 -  -5.5  -4.07568   TGGCCTGTTTGAAAA                GGTAC CCT GCACC                TGATGTTATTGGGGA  65 159
LQF52_RS00440  111359 ..  111384 - -13.3   -3.8823   TTTAATCAGAAAATA         GAAAAGGCCGC GATT GCGGCCTTTAC          TTATTATCACGCTAC 100 48
        bcsR  102272 ..  102293 -  -2.2  -2.78712   CCTGCAATGCAATCA           CGGGCATCG TCAGT CGCT-CCCG           GCCGGTTCTTTTAAT  40 13
        bcsQ  101520 ..  101555 -  -5.5  -2.70932   TGGCGGGCGGAACGA    GAAAGAGGCGCA-GAA TCCCG CTCATACGCCACTTTC    CTTAACGTGAATCAG  50 11
        bcsA   98816 ..   98832 -  -5.8  -3.86015   CATTGTCGGGAGAAA              GACCGT TGATC ACGGCC              TGTGAATGGCAATCA  61 38
        bcsB NONE
        bcsZ NONE
        bcsC   91725 ..   91737 -  -3.4  -3.89501   GAATACGTTGAGAAA                CTCA ATAAA TGAG                AATAAAAATAATAGT  55 148
LQF52_RS00375 NONE
LQF52_RS00370 NONE
        imm2   84131 ..   84149 - -13.1  -2.59431   CTTTCCTATAAGTTA             GCGGCCC AGAAA GGGCCGC             TCTATTGAACCTATT  84 36
LQF52_RS00345   77999 ..   78013 -  -7.1    -3.154   AAGTGAGCAAGAAAT               TGCGC GGAAT GCGCA               GTTATGCTGAAAGTT  62 325
LQF52_RS00340   77228 ..   77243 - -11.8   -4.4715   GCTCAATGCAGAAAA              CCCGGG CAAG CCCGGG               TTAAATAGCTATTAC 100 37
        tssI NONE
LQF52_RS00330   74872 ..   74889 -  -3.5  -2.58427   AACACGGTTTAGAAT             GTCACTCA GCA TGA-TGAC             TCCTTTCAGGTGGCA  42 31
LQF52_RS00325 NONE
LQF52_RS00320   70127 ..   70156 -  -9.4  -4.52143   GCTAAATATAATAAA       GCCGGAAG-GATC TTGGG GATCGCTTCCAGC       TTTTTATTACAGATA  89 32
LQF52_RS00300 NONE
        xerC   64823 ..   64858 - -15.4  -3.15544   GCCCAGCCTGACCAA    GGCAAGAGGTGCGCCA TGGA CGGCGCGCCTGTTGCC     CTGCACCGTCCTGCG 100 58
LQF52_RS00290 NONE
LQF52_RS00285   63064 ..   63093 -  -9.4  -4.52143   GCTAAATATAATAAA       GCCGGAAG-GATC TTGGG GATCGCTTCCAGC       TTTTTATTACAGATA  89 32
LQF52_RS00265 NONE
        xerC   57760 ..   57795 - -15.4  -3.15544   GCCCAGCCTGACCAA    GGCAAGAGGTGCGCCA TGGA CGGCGCGCCTGTTGCC     CTGCACCGTCCTGCG 100 58
LQF52_RS00255 NONE
LQF52_RS00250   55900 ..   55917 -  -2.7  -5.02074   GGATTTGCGAAAAAA             GAAGATA TATT TATCTAC              TAATCTACCCCCTTG  70 60
LQF52_RS00240 NONE
LQF52_RS00235   54552 ..   54581 -   -13  -4.32846   AGCAGATAAAAAATA       GCCGGAAG-GATC GTTGG GATCGCTTCCGGC       GTTATTTTTAATTAA 100 33
LQF52_RS22180 NONE
LQF52_RS00230   53409 ..   53429 -  -8.3  -2.52464   TTTGCCTTCAACTCA            CCTACGC TGTTAAG GCGTAGG            TGAGTGGGAAGTGGG  63 72
LQF52_RS00200   44757 ..   44778 - -13.7  -5.47159   CTGAATAAATAAAAA           CGCCACGGC AATC ACCGTGGCG            TTTTCGTTAGTGGGG 100 54
LQF52_RS00160   35087 ..   35099 -  -7.7  -3.28712   GTTTGTGTGTGACAA                CAGCA TCA TGCTG                TGTGATGCAAAAAGC  59 217
LQF52_RS00150   33377 ..   33404 - -10.6  -5.76633   TCACACATAAAAAAA        CGGCTTGCCC TGATGAGG AGGCAAGCCG         GAAAGAGGGTAATAC 100 103
LQF52_RS00130   28708 ..   28742 -  -2.1  -3.24146   TGGGGTAAGCAAAAT    GTGTGCGATAGGCGAA TTAG TTCGCCT-TGGGACGC     CAGACGCGCTCTGCG  44 7
        ssuD NONE
        ssuC NONE
        ssuB   25880 ..   25913 -  -9.8  -3.60098   ATTTTTGATGTTAAA     TCTGGCGAT-AAGAT ACACA ATCTCGATCGCCAGA     GTGACGGTTATATCG  77 33
LQF52_RS00110   25431 ..   25460 - -16.6  -4.75174   CACTGAATGTAAAAA       CGGACTTTCCTC TTGATT GAGGAAAGTCCG        TTTAATTTTTTGATT 100 56
LQF52_RS00070   15975 ..   15989 -   -10  -3.14528   ATATAAAGCCGAATA               GCCATC AAC GATGGC               TATTCTTATTTCAAA  74 133
LQF52_RS00040   10277 ..   10295 -   -11  -2.72036   TAAATCGAGATAGCA             GTGAGGCA TGA CGCCTCAC             CGTGTGAGCGAGGGT  74 40
LQF52_RS00035    8007 ..    8028 - -15.9  -4.63218   GCGCTGGGAATAAAA           CACAGGCCG TTTC CGGCCTGTG            TGGGATTTCTACGGG 100 54
LQF52_RS00025    5969 ..    6002 -  -7.3  -2.70525   CTGGGTGAAATGAAC     CCGGATCAGCTGTGG GAAA CCACGATGGATCCGG      CCAGCCGCCGCATGC  55 306
