locus-tag class description CPU05_RS00005 PF00308 Bacterial dnaA protein CPU05_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CPU05_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CPU05_RS00010 PF02767 DNA polymerase III beta subunit, central domain CPU05_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CPU05_RS00020 PF02463 RecF/RecN/SMC N terminal domain CPU05_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus CPU05_RS00025 PF01751 Toprim domain CPU05_RS00025 PF00204 DNA gyrase B CPU05_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPU05_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller CPU05_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A CPU05_RS00035 PF01250 Ribosomal protein S6 CPU05_RS00040 PF00436 Single-strand binding protein family CPU05_RS00045 PF01084 Ribosomal protein S18 CPU05_RS00050 PF02272 DHHA1 domain CPU05_RS00050 PF01368 DHH family CPU05_RS00055 PF03948 Ribosomal protein L9, C-terminal domain CPU05_RS00055 PF01281 Ribosomal protein L9, N-terminal domain CPU05_RS00060 PF00772 DnaB-like helicase N terminal domain CPU05_RS00060 PF03796 DnaB-like helicase C terminal domain CPU05_RS00065 PF07690 Major Facilitator Superfamily CPU05_RS00080 PF12848 ABC transporter CPU05_RS00080 PF00005 ABC transporter CPU05_RS00095 PF00005 ABC transporter CPU05_RS00105 PF01381 Helix-turn-helix CPU05_RS00110 PF02378 Phosphotransferase system, EIIC CPU05_RS00120 PF03358 NADPH-dependent FMN reductase CPU05_RS00130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPU05_RS00130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPU05_RS00135 PF00696 Amino acid kinase family CPU05_RS00145 PF13520 Amino acid permease CPU05_RS00170 PF13411 MerR HTH family regulatory protein CPU05_RS00175 PF00893 Small Multidrug Resistance protein CPU05_RS00185 PF03006 Haemolysin-III related CPU05_RS00215 PF00375 Sodium:dicarboxylate symporter family CPU05_RS00245 PF01566 Natural resistance-associated macrophage protein CPU05_RS00270 PF00132 Bacterial transferase hexapeptide (six repeats) CPU05_RS00270 PF12464 Maltose acetyltransferase CPU05_RS00275 PF00106 short chain dehydrogenase CPU05_RS00280 PF00248 Aldo/keto reductase family CPU05_RS00300 PF08402 TOBE domain CPU05_RS00300 PF00005 ABC transporter CPU05_RS00325 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CPU05_RS00335 PF03466 LysR substrate binding domain CPU05_RS00335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPU05_RS00340 PF00248 Aldo/keto reductase family CPU05_RS00345 PF00248 Aldo/keto reductase family CPU05_RS00350 PF01061 ABC-2 type transporter CPU05_RS00355 PF13732 Domain of unknown function (DUF4162) CPU05_RS00355 PF00005 ABC transporter CPU05_RS00370 PF00561 alpha/beta hydrolase fold CPU05_RS00375 PF00781 Diacylglycerol kinase catalytic domain CPU05_RS00395 PF00535 Glycosyl transferase family 2 CPU05_RS00400 PF00232 Glycosyl hydrolase family 1 CPU05_RS00425 PF00248 Aldo/keto reductase family CPU05_RS00430 PF00288 GHMP kinases N terminal domain CPU05_RS00430 PF10509 Galactokinase galactose-binding signature CPU05_RS00430 PF08544 GHMP kinases C terminal CPU05_RS00440 PF05067 Manganese containing catalase CPU05_RS00485 PF00746 LPXTG cell wall anchor motif CPU05_RS00485 PF05737 Collagen binding domain CPU05_RS00485 PF17961 Bacterial Ig domain CPU05_RS00495 PF03611 PTS system sugar-specific permease component CPU05_RS00510 PF08220 DeoR-like helix-turn-helix domain CPU05_RS00510 PF00455 DeoR C terminal sensor domain CPU05_RS00515 PF02502 Ribose/Galactose Isomerase CPU05_RS00520 PF02502 Ribose/Galactose Isomerase CPU05_RS00525 PF01791 DeoC/LacD family aldolase CPU05_RS00540 PF01380 SIS domain CPU05_RS00540 PF01418 Helix-turn-helix domain, rpiR family CPU05_RS00545 PF00294 pfkB family carbohydrate kinase CPU05_RS00550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPU05_RS00550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPU05_RS00555 PF06874 Firmicute fructose-1,6-bisphosphatase CPU05_RS00585 PF01380 SIS domain CPU05_RS00595 PF01380 SIS domain CPU05_RS00595 PF01418 Helix-turn-helix domain, rpiR family CPU05_RS00600 PF02308 MgtC family CPU05_RS00605 PF03830 PTS system sorbose subfamily IIB component CPU05_RS00610 PF03609 PTS system sorbose-specific iic component CPU05_RS00615 PF03613 PTS system mannose/fructose/sorbose family IID component CPU05_RS00655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPU05_RS00655 PF00205 Thiamine pyrophosphate enzyme, central domain CPU05_RS00655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPU05_RS00665 PF01055 Glycosyl hydrolases family 31 CPU05_RS00665 PF13802 Galactose mutarotase-like CPU05_RS00675 PF00480 ROK family CPU05_RS00685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPU05_RS00685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPU05_RS00690 PF01156 Inosine-uridine preferring nucleoside hydrolase CPU05_RS00715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPU05_RS00715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPU05_RS00720 PF13520 Amino acid permease CPU05_RS00725 PF04371 Porphyromonas-type peptidyl-arginine deiminase CPU05_RS00730 PF04371 Porphyromonas-type peptidyl-arginine deiminase CPU05_RS00745 PF01497 Periplasmic binding protein CPU05_RS00745 PF12833 Helix-turn-helix domain CPU05_RS00755 PF00248 Aldo/keto reductase family CPU05_RS00760 PF00158 Sigma-54 interaction domain CPU05_RS00760 PF00874 PRD domain CPU05_RS00770 PF03830 PTS system sorbose subfamily IIB component CPU05_RS00775 PF03609 PTS system sorbose-specific iic component CPU05_RS00780 PF03613 PTS system mannose/fructose/sorbose family IID component CPU05_RS00785 PF01380 SIS domain CPU05_RS00795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPU05_RS00800 PF01791 DeoC/LacD family aldolase CPU05_RS00805 PF01676 Metalloenzyme superfamily CPU05_RS00810 PF01048 Phosphorylase superfamily CPU05_RS00815 PF01773 Na+ dependent nucleoside transporter N-terminus CPU05_RS00815 PF07662 Na+ dependent nucleoside transporter C-terminus CPU05_RS00820 PF00860 Permease family CPU05_RS00825 PF04198 Putative sugar-binding domain CPU05_RS00830 PF00591 Glycosyl transferase family, a/b domain CPU05_RS00830 PF02885 Glycosyl transferase family, helical bundle domain CPU05_RS00830 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CPU05_RS00840 PF01306 LacY proton/sugar symporter CPU05_RS00845 PF04616 Glycosyl hydrolases family 43 CPU05_RS00845 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CPU05_RS00860 PF01501 Glycosyl transferase family 8 CPU05_RS00870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPU05_RS00870 PF00056 lactate/malate dehydrogenase, NAD binding domain CPU05_RS00875 PF02595 Glycerate kinase family CPU05_RS00880 PF00253 Ribosomal protein S14p/S29e CPU05_RS00885 PF00892 EamA-like transporter family CPU05_RS00890 PF00534 Glycosyl transferases group 1 CPU05_RS00895 PF00534 Glycosyl transferases group 1 CPU05_RS00900 PF00881 Nitroreductase family CPU05_RS00910 PF01638 HxlR-like helix-turn-helix CPU05_RS00915 PF00107 Zinc-binding dehydrogenase CPU05_RS00915 PF08240 Alcohol dehydrogenase GroES-like domain CPU05_RS00920 PF08543 Phosphomethylpyrimidine kinase CPU05_RS00935 PF02378 Phosphotransferase system, EIIC CPU05_RS00950 PF01546 Peptidase family M20/M25/M40 CPU05_RS00955 PF00579 tRNA synthetases class I (W and Y) CPU05_RS00955 PF01479 S4 domain CPU05_RS00960 PF07690 Major Facilitator Superfamily CPU05_RS00990 PF07969 Amidohydrolase family CPU05_RS01000 PF00571 CBS domain CPU05_RS01000 PF00005 ABC transporter CPU05_RS01005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPU05_RS01005 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPU05_RS01010 PF00999 Sodium/hydrogen exchanger family CPU05_RS01015 PF13538 UvrD-like helicase C-terminal domain CPU05_RS01020 PF00579 tRNA synthetases class I (W and Y) CPU05_RS01030 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CPU05_RS01050 PF01904 Protein of unknown function DUF72 CPU05_RS01055 PF09334 tRNA synthetases class I (M) CPU05_RS01055 PF01588 Putative tRNA binding domain CPU05_RS01055 PF08264 Anticodon-binding domain of tRNA CPU05_RS01060 PF01026 TatD related DNase CPU05_RS01065 PF13331 Domain of unknown function (DUF4093) CPU05_RS01065 PF01751 Toprim domain CPU05_RS01070 PF00398 Ribosomal RNA adenine dimethylase CPU05_RS01075 PF06257 Biofilm formation stimulator VEG CPU05_RS01080 PF00288 GHMP kinases N terminal domain CPU05_RS01080 PF08544 GHMP kinases C terminal CPU05_RS01090 PF00582 Universal stress protein family CPU05_RS01100 PF07690 Major Facilitator Superfamily CPU05_RS01110 PF00005 ABC transporter CPU05_RS01110 PF08402 TOBE domain CPU05_RS01115 PF02653 Branched-chain amino acid transport system / permease component CPU05_RS01125 PF07702 UTRA domain CPU05_RS01125 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS01130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPU05_RS01135 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CPU05_RS01140 PF00232 Glycosyl hydrolase family 1 CPU05_RS01145 PF01418 Helix-turn-helix domain, rpiR family CPU05_RS01145 PF01380 SIS domain CPU05_RS01150 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPU05_RS01150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPU05_RS01155 PF00106 short chain dehydrogenase CPU05_RS01160 PF13520 Amino acid permease CPU05_RS01170 PF03606 C4-dicarboxylate anaerobic carrier CPU05_RS01175 PF03167 Uracil DNA glycosylase superfamily CPU05_RS01180 PF01297 Zinc-uptake complex component A periplasmic CPU05_RS01185 PF00005 ABC transporter CPU05_RS01190 PF00950 ABC 3 transport family CPU05_RS01195 PF09182 Bacterial purine repressor, N-terminal CPU05_RS01195 PF00156 Phosphoribosyl transferase domain CPU05_RS01200 PF00132 Bacterial transferase hexapeptide (six repeats) CPU05_RS01200 PF00483 Nucleotidyl transferase CPU05_RS01210 PF02687 FtsX-like permease family CPU05_RS01215 PF00005 ABC transporter CPU05_RS01230 PF10662 Ethanolamine utilisation - propanediol utilisation CPU05_RS01235 PF00936 BMC domain CPU05_RS01240 PF00936 BMC domain CPU05_RS01245 PF02286 Dehydratase large subunit CPU05_RS01250 PF02288 Dehydratase medium subunit CPU05_RS01255 PF02287 Dehydratase small subunit CPU05_RS01260 PF08841 Diol dehydratase reactivase ATPase-like domain CPU05_RS01260 PF18427 DD-reactivating factor swiveling domain CPU05_RS01275 PF00936 BMC domain CPU05_RS01280 PF06130 Phosphate propanoyltransferase CPU05_RS01290 PF03319 Ethanolamine utilisation protein EutN/carboxysome CPU05_RS01295 PF01923 Cobalamin adenosyltransferase CPU05_RS01300 PF03928 Haem-degrading CPU05_RS01305 PF00171 Aldehyde dehydrogenase family CPU05_RS01310 PF00465 Iron-containing alcohol dehydrogenase CPU05_RS01315 PF00871 Acetokinase family CPU05_RS01320 PF00936 BMC domain CPU05_RS01325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CPU05_RS01330 PF13350 Tyrosine phosphatase family CPU05_RS01335 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CPU05_RS01335 PF12241 Trans-2-enoyl-CoA reductase catalytic region CPU05_RS01335 PF07055 Enoyl reductase FAD binding domain CPU05_RS01340 PF12833 Helix-turn-helix domain CPU05_RS01340 PF10114 Sensory domain found in PocR CPU05_RS01350 PF00005 ABC transporter CPU05_RS01360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPU05_RS01360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPU05_RS01365 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPU05_RS01365 PF14572 Phosphoribosyl synthetase-associated domain CPU05_RS01385 PF00230 Major intrinsic protein CPU05_RS01390 PF00027 Cyclic nucleotide-binding domain CPU05_RS01390 PF00520 Ion transport protein CPU05_RS01395 PF17763 Glutaminase/Asparaginase C-terminal domain CPU05_RS01395 PF00710 Asparaginase, N-terminal CPU05_RS01400 PF01431 Peptidase family M13 CPU05_RS01400 PF05649 Peptidase family M13 CPU05_RS01405 PF03590 Aspartate-ammonia ligase CPU05_RS01410 PF00860 Permease family CPU05_RS01415 PF00075 RNase H CPU05_RS01460 PF03466 LysR substrate binding domain CPU05_RS01460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPU05_RS01465 PF03601 Conserved hypothetical protein 698 CPU05_RS01485 PF00156 Phosphoribosyl transferase domain CPU05_RS01490 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPU05_RS01490 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPU05_RS01495 PF01979 Amidohydrolase family CPU05_RS01500 PF00117 Glutamine amidotransferase class-I CPU05_RS01500 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPU05_RS01505 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPU05_RS01505 PF02142 MGS-like domain CPU05_RS01505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPU05_RS01510 PF01180 Dihydroorotate dehydrogenase CPU05_RS01515 PF14537 Cytochrome c3 CPU05_RS01515 PF00890 FAD binding domain CPU05_RS01525 PF07690 Major Facilitator Superfamily CPU05_RS01530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPU05_RS01545 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CPU05_RS01550 PF00871 Acetokinase family CPU05_RS01555 PF01515 Phosphate acetyl/butaryl transferase CPU05_RS01560 PF01475 Ferric uptake regulator family CPU05_RS01565 PF07690 Major Facilitator Superfamily CPU05_RS01570 PF03631 Virulence factor BrkB CPU05_RS01580 PF13350 Tyrosine phosphatase family CPU05_RS01585 PF13350 Tyrosine phosphatase family CPU05_RS01590 PF07972 NrdI Flavodoxin like CPU05_RS01600 PF13732 Domain of unknown function (DUF4162) CPU05_RS01600 PF00005 ABC transporter CPU05_RS01610 PF01595 Cyclin M transmembrane N-terminal domain CPU05_RS01610 PF03471 Transporter associated domain CPU05_RS01610 PF00571 CBS domain CPU05_RS01615 PF00248 Aldo/keto reductase family CPU05_RS01630 PF01418 Helix-turn-helix domain, rpiR family CPU05_RS01630 PF01380 SIS domain CPU05_RS01635 PF00367 phosphotransferase system, EIIB CPU05_RS01635 PF02378 Phosphotransferase system, EIIC CPU05_RS01640 PF00155 Aminotransferase class I and II CPU05_RS01645 PF04073 Aminoacyl-tRNA editing domain CPU05_RS01650 PF07702 UTRA domain CPU05_RS01650 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS01655 PF09363 XFP C-terminal domain CPU05_RS01655 PF09364 XFP N-terminal domain CPU05_RS01655 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CPU05_RS01660 PF00293 NUDIX domain CPU05_RS01665 PF01479 S4 domain CPU05_RS01665 PF00849 RNA pseudouridylate synthase CPU05_RS01670 PF00582 Universal stress protein family CPU05_RS01675 PF00480 ROK family CPU05_RS01680 PF04474 Protein of unknown function (DUF554) CPU05_RS01685 PF03466 LysR substrate binding domain CPU05_RS01685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPU05_RS01690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPU05_RS01690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CPU05_RS01700 PF03734 L,D-transpeptidase catalytic domain CPU05_RS01710 PF09335 SNARE associated Golgi protein CPU05_RS01730 PF00999 Sodium/hydrogen exchanger family CPU05_RS01735 PF01156 Inosine-uridine preferring nucleoside hydrolase CPU05_RS01740 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPU05_RS01745 PF00884 Sulfatase CPU05_RS01775 PF00085 Thioredoxin CPU05_RS01785 PF00557 Metallopeptidase family M24 CPU05_RS01795 PF12848 ABC transporter CPU05_RS01795 PF00005 ABC transporter CPU05_RS01800 PF00248 Aldo/keto reductase family CPU05_RS01805 PF00561 alpha/beta hydrolase fold CPU05_RS01815 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CPU05_RS01815 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CPU05_RS01815 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CPU05_RS01820 PF00962 Adenosine/AMP deaminase CPU05_RS01825 PF00860 Permease family CPU05_RS01830 PF13382 Adenine deaminase C-terminal domain CPU05_RS01830 PF01979 Amidohydrolase family CPU05_RS01840 PF00293 NUDIX domain CPU05_RS01850 PF00625 Guanylate kinase CPU05_RS01855 PF01475 Ferric uptake regulator family CPU05_RS01870 PF00005 ABC transporter CPU05_RS01875 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPU05_RS01880 PF00528 Binding-protein-dependent transport system inner membrane component CPU05_RS01885 PF00528 Binding-protein-dependent transport system inner membrane component CPU05_RS01890 PF13167 GTP-binding GTPase N-terminal CPU05_RS01890 PF16360 GTP-binding GTPase Middle Region CPU05_RS01890 PF01926 50S ribosome-binding GTPase CPU05_RS01900 PF13520 Amino acid permease CPU05_RS01905 PF00300 Histidine phosphatase superfamily (branch 1) CPU05_RS01910 PF13538 UvrD-like helicase C-terminal domain CPU05_RS01915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPU05_RS01915 PF00205 Thiamine pyrophosphate enzyme, central domain CPU05_RS01915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPU05_RS01920 PF03306 Alpha-acetolactate decarboxylase CPU05_RS01925 PF00485 Phosphoribulokinase / Uridine kinase family CPU05_RS01930 PF00375 Sodium:dicarboxylate symporter family CPU05_RS01935 PF13545 Crp-like helix-turn-helix domain CPU05_RS01935 PF00027 Cyclic nucleotide-binding domain CPU05_RS01940 PF00403 Heavy-metal-associated domain CPU05_RS01950 PF00403 Heavy-metal-associated domain CPU05_RS01955 PF02540 NAD synthase CPU05_RS01955 PF00958 GMP synthase C terminal domain CPU05_RS01955 PF00117 Glutamine amidotransferase class-I CPU05_RS01980 PF07690 Major Facilitator Superfamily CPU05_RS01985 PF01433 Peptidase family M1 domain CPU05_RS01985 PF11838 ERAP1-like C-terminal domain CPU05_RS01995 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 CPU05_RS01995 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 CPU05_RS01995 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 CPU05_RS01995 PF13395 HNH endonuclease CPU05_RS02000 PF01867 CRISPR associated protein Cas1 CPU05_RS02005 PF09827 CRISPR associated protein Cas2 CPU05_RS02015 PF02517 CPBP intramembrane metalloprotease CPU05_RS02020 PF00166 Chaperonin 10 Kd subunit CPU05_RS02025 PF00118 TCP-1/cpn60 chaperonin family CPU05_RS02030 PF13520 Amino acid permease CPU05_RS02035 PF00953 Glycosyl transferase family 4 CPU05_RS02040 PF01205 Uncharacterized protein family UPF0029 CPU05_RS02040 PF09186 Domain of unknown function (DUF1949) CPU05_RS02045 PF04851 Type III restriction enzyme, res subunit CPU05_RS02045 PF00271 Helicase conserved C-terminal domain CPU05_RS02055 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CPU05_RS02055 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CPU05_RS02060 PF07517 SecA DEAD-like domain CPU05_RS02060 PF01043 SecA preprotein cross-linking domain CPU05_RS02060 PF07516 SecA Wing and Scaffold domain CPU05_RS02070 PF00486 Transcriptional regulatory protein, C terminal CPU05_RS02070 PF00072 Response regulator receiver domain CPU05_RS02075 PF00512 His Kinase A (phospho-acceptor) domain CPU05_RS02075 PF00989 PAS fold CPU05_RS02075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPU05_RS02075 PF00672 HAMP domain CPU05_RS02080 PF12849 PBP superfamily domain CPU05_RS02085 PF00528 Binding-protein-dependent transport system inner membrane component CPU05_RS02090 PF00528 Binding-protein-dependent transport system inner membrane component CPU05_RS02095 PF00005 ABC transporter CPU05_RS02100 PF00005 ABC transporter CPU05_RS02105 PF01895 PhoU domain CPU05_RS02120 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CPU05_RS02125 PF02603 HPr Serine kinase N terminus CPU05_RS02125 PF07475 HPr Serine kinase C-terminal domain CPU05_RS02130 PF01790 Prolipoprotein diacylglyceryl transferase CPU05_RS02135 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CPU05_RS02135 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CPU05_RS02140 PF00483 Nucleotidyl transferase CPU05_RS02145 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPU05_RS02150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPU05_RS02150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPU05_RS02150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPU05_RS02150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPU05_RS02160 PF17757 UvrB interaction domain CPU05_RS02160 PF12344 Ultra-violet resistance protein B CPU05_RS02160 PF02151 UvrB/uvrC motif CPU05_RS02160 PF00271 Helicase conserved C-terminal domain CPU05_RS02160 PF04851 Type III restriction enzyme, res subunit CPU05_RS02165 PF17760 UvrA interaction domain CPU05_RS02165 PF00005 ABC transporter CPU05_RS02165 PF17755 UvrA DNA-binding domain CPU05_RS02170 PF03668 P-loop ATPase protein family CPU05_RS02175 PF01933 Uncharacterised protein family UPF0052 CPU05_RS02185 PF01476 LysM domain CPU05_RS02185 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CPU05_RS02195 PF00574 Clp protease CPU05_RS02205 PF00309 Sigma-54 factor, Activator interacting domain (AID) CPU05_RS02205 PF04552 Sigma-54, DNA binding domain CPU05_RS02205 PF04963 Sigma-54 factor, core binding domain CPU05_RS02210 PF04198 Putative sugar-binding domain CPU05_RS02215 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPU05_RS02215 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPU05_RS02220 PF00162 Phosphoglycerate kinase CPU05_RS02225 PF00121 Triosephosphate isomerase CPU05_RS02230 PF00113 Enolase, C-terminal TIM barrel domain CPU05_RS02230 PF03952 Enolase, N-terminal domain CPU05_RS02235 PF03840 Preprotein translocase SecG subunit CPU05_RS02240 PF00575 S1 RNA binding domain CPU05_RS02240 PF17876 Cold shock domain CPU05_RS02240 PF08206 Ribonuclease B OB domain CPU05_RS02240 PF00773 RNB domain CPU05_RS02245 PF01668 SmpB protein CPU05_RS02265 PF03167 Uracil DNA glycosylase superfamily CPU05_RS02270 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CPU05_RS02275 PF13302 Acetyltransferase (GNAT) domain CPU05_RS02280 PF11490 DNA polymerase III polC-type N-terminus II CPU05_RS02280 PF02811 PHP domain CPU05_RS02280 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPU05_RS02280 PF01336 OB-fold nucleic acid binding domain CPU05_RS02280 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPU05_RS02280 PF00929 Exonuclease CPU05_RS02280 PF14579 Helix-hairpin-helix motif CPU05_RS02285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPU05_RS02290 PF01565 FAD binding domain CPU05_RS02290 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CPU05_RS02295 PF02457 DisA bacterial checkpoint controller nucleotide-binding CPU05_RS02305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPU05_RS02305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPU05_RS02305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPU05_RS02305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPU05_RS02310 PF01380 SIS domain CPU05_RS02320 PF06100 MCRA family CPU05_RS02330 PF13419 Haloacid dehalogenase-like hydrolase CPU05_RS02335 PF07840 FadR C-terminal domain CPU05_RS02335 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS02340 PF07702 UTRA domain CPU05_RS02340 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS02345 PF03830 PTS system sorbose subfamily IIB component CPU05_RS02350 PF03609 PTS system sorbose-specific iic component CPU05_RS02355 PF03613 PTS system mannose/fructose/sorbose family IID component CPU05_RS02365 PF01380 SIS domain CPU05_RS02370 PF03830 PTS system sorbose subfamily IIB component CPU05_RS02370 PF03610 PTS system fructose IIA component CPU05_RS02380 PF10400 Virulence activator alpha C-term CPU05_RS02380 PF03551 Transcriptional regulator PadR-like family CPU05_RS02395 PF00152 tRNA synthetases class II (D, K and N) CPU05_RS02395 PF01336 OB-fold nucleic acid binding domain CPU05_RS02405 PF00581 Rhodanese-like domain CPU05_RS02415 PF00005 ABC transporter CPU05_RS02435 PF03613 PTS system mannose/fructose/sorbose family IID component CPU05_RS02440 PF03830 PTS system sorbose subfamily IIB component CPU05_RS02445 PF01418 Helix-turn-helix domain, rpiR family CPU05_RS02445 PF01380 SIS domain CPU05_RS02455 PF01925 Sulfite exporter TauE/SafE CPU05_RS02460 PF03477 ATP cone domain CPU05_RS02460 PF13597 Anaerobic ribonucleoside-triphosphate reductase CPU05_RS02470 PF00005 ABC transporter CPU05_RS02475 PF01458 Uncharacterized protein family (UPF0051) CPU05_RS02480 PF00266 Aminotransferase class-V CPU05_RS02485 PF01592 NifU-like N terminal domain CPU05_RS02490 PF01458 Uncharacterized protein family (UPF0051) CPU05_RS02495 PF01914 MarC family integral membrane protein CPU05_RS02510 PF03819 MazG nucleotide pyrophosphohydrolase domain CPU05_RS02515 PF07687 Peptidase dimerisation domain CPU05_RS02515 PF01546 Peptidase family M20/M25/M40 CPU05_RS02520 PF08240 Alcohol dehydrogenase GroES-like domain CPU05_RS02520 PF00107 Zinc-binding dehydrogenase CPU05_RS02525 PF00107 Zinc-binding dehydrogenase CPU05_RS02525 PF13823 Alcohol dehydrogenase GroES-associated CPU05_RS02525 PF08240 Alcohol dehydrogenase GroES-like domain CPU05_RS02545 PF04230 Polysaccharide pyruvyl transferase CPU05_RS02550 PF00083 Sugar (and other) transporter CPU05_RS02555 PF04226 Transglycosylase associated protein CPU05_RS02570 PF01501 Glycosyl transferase family 8 CPU05_RS02600 PF00665 Integrase core domain CPU05_RS02600 PF13333 Integrase core domain CPU05_RS02600 PF13276 HTH-like domain CPU05_RS02605 PF01527 Transposase CPU05_RS02610 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPU05_RS02610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPU05_RS02630 PF00239 Resolvase, N terminal domain CPU05_RS02630 PF02796 Helix-turn-helix domain of resolvase CPU05_RS02675 PF04991 LicD family CPU05_RS02680 PF06736 Protein of unknown function (DUF1211) CPU05_RS02685 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CPU05_RS02695 PF02110 Hydroxyethylthiazole kinase family CPU05_RS02700 PF08543 Phosphomethylpyrimidine kinase CPU05_RS02705 PF02581 Thiamine monophosphate synthase CPU05_RS02715 PF00270 DEAD/DEAH box helicase CPU05_RS02715 PF00271 Helicase conserved C-terminal domain CPU05_RS02715 PF16124 RecQ zinc-binding CPU05_RS02715 PF09382 RQC domain CPU05_RS02715 PF00570 HRDC domain CPU05_RS02720 PF00413 Matrixin CPU05_RS02730 PF02706 Chain length determinant protein CPU05_RS02735 PF13614 AAA domain CPU05_RS02745 PF02397 Bacterial sugar transferase CPU05_RS02755 PF00535 Glycosyl transferase family 2 CPU05_RS02755 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CPU05_RS02760 PF12464 Maltose acetyltransferase CPU05_RS02760 PF00132 Bacterial transferase hexapeptide (six repeats) CPU05_RS02765 PF00291 Pyridoxal-phosphate dependent enzyme CPU05_RS02775 PF00483 Nucleotidyl transferase CPU05_RS02780 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CPU05_RS02785 PF16363 GDP-mannose 4,6 dehydratase CPU05_RS02800 PF04321 RmlD substrate binding domain CPU05_RS02805 PF07702 UTRA domain CPU05_RS02805 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS02815 PF03830 PTS system sorbose subfamily IIB component CPU05_RS02820 PF03609 PTS system sorbose-specific iic component CPU05_RS02825 PF03613 PTS system mannose/fructose/sorbose family IID component CPU05_RS02830 PF01204 Trehalase CPU05_RS02840 PF01116 Fructose-bisphosphate aldolase class-II CPU05_RS02845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPU05_RS02845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPU05_RS02855 PF02378 Phosphotransferase system, EIIC CPU05_RS02855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPU05_RS02870 PF00874 PRD domain CPU05_RS02870 PF05043 Mga helix-turn-helix domain CPU05_RS02870 PF08279 HTH domain CPU05_RS02875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPU05_RS02880 PF00128 Alpha amylase, catalytic domain CPU05_RS02880 PF16657 Maltogenic Amylase, C-terminal domain CPU05_RS02885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPU05_RS02885 PF02378 Phosphotransferase system, EIIC CPU05_RS02885 PF00367 phosphotransferase system, EIIB CPU05_RS02890 PF07702 UTRA domain CPU05_RS02890 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS02905 PF03965 Penicillinase repressor CPU05_RS02920 PF00403 Heavy-metal-associated domain CPU05_RS02930 PF13520 Amino acid permease CPU05_RS02945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPU05_RS02950 PF00271 Helicase conserved C-terminal domain CPU05_RS02950 PF00270 DEAD/DEAH box helicase CPU05_RS02955 PF03816 Cell envelope-related transcriptional attenuator domain CPU05_RS02975 PF00478 IMP dehydrogenase / GMP reductase domain CPU05_RS02980 PF17871 AAA lid domain CPU05_RS02980 PF10431 C-terminal, D2-small domain, of ClpB protein CPU05_RS02980 PF00004 ATPase family associated with various cellular activities (AAA) CPU05_RS02980 PF07724 AAA domain (Cdc48 subfamily) CPU05_RS02990 PF00381 PTS HPr component phosphorylation site CPU05_RS02995 PF02896 PEP-utilising enzyme, TIM barrel domain CPU05_RS02995 PF00391 PEP-utilising enzyme, mobile domain CPU05_RS02995 PF05524 PEP-utilising enzyme, N-terminal CPU05_RS03000 PF12697 Alpha/beta hydrolase family CPU05_RS03005 PF00534 Glycosyl transferases group 1 CPU05_RS03005 PF13439 Glycosyltransferase Family 4 CPU05_RS03010 PF00534 Glycosyl transferases group 1 CPU05_RS03010 PF13439 Glycosyltransferase Family 4 CPU05_RS03145 PF02773 S-adenosylmethionine synthetase, C-terminal domain CPU05_RS03145 PF02772 S-adenosylmethionine synthetase, central domain CPU05_RS03145 PF00438 S-adenosylmethionine synthetase, N-terminal domain CPU05_RS03150 PF07690 Major Facilitator Superfamily CPU05_RS03155 PF06962 Putative rRNA methylase CPU05_RS03160 PF01569 PAP2 superfamily CPU05_RS03165 PF08264 Anticodon-binding domain of tRNA CPU05_RS03165 PF00133 tRNA synthetases class I (I, L, M and V) CPU05_RS03165 PF13603 Leucyl-tRNA synthetase, Domain 2 CPU05_RS03165 PF09334 tRNA synthetases class I (M) CPU05_RS03170 PF14667 Polysaccharide biosynthesis C-terminal domain CPU05_RS03170 PF01943 Polysaccharide biosynthesis protein CPU05_RS03175 PF00849 RNA pseudouridylate synthase CPU05_RS03175 PF01479 S4 domain CPU05_RS03180 PF01256 Carbohydrate kinase CPU05_RS03185 PF00582 Universal stress protein family CPU05_RS03200 PF01425 Amidase CPU05_RS03205 PF01712 Deoxynucleoside kinase CPU05_RS03240 PF13537 Glutamine amidotransferase domain CPU05_RS03240 PF00733 Asparagine synthase CPU05_RS03245 PF08245 Mur ligase middle domain CPU05_RS03245 PF02875 Mur ligase family, glutamate ligase domain CPU05_RS03255 PF01177 Asp/Glu/Hydantoin racemase CPU05_RS03260 PF01223 DNA/RNA non-specific endonuclease CPU05_RS03265 PF13580 SIS domain CPU05_RS03270 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CPU05_RS03275 PF00480 ROK family CPU05_RS03285 PF00474 Sodium:solute symporter family CPU05_RS03290 PF00701 Dihydrodipicolinate synthetase family CPU05_RS03305 PF01915 Glycosyl hydrolase family 3 C-terminal domain CPU05_RS03305 PF00933 Glycosyl hydrolase family 3 N terminal domain CPU05_RS03305 PF14310 Fibronectin type III-like domain CPU05_RS03310 PF02378 Phosphotransferase system, EIIC CPU05_RS03315 PF00480 ROK family CPU05_RS03320 PF00232 Glycosyl hydrolase family 1 CPU05_RS03345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPU05_RS03350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPU05_RS03350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPU05_RS03350 PF02378 Phosphotransferase system, EIIC CPU05_RS03360 PF01979 Amidohydrolase family CPU05_RS03375 PF01263 Aldose 1-epimerase CPU05_RS03380 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS03385 PF00083 Sugar (and other) transporter CPU05_RS03395 PF00596 Class II Aldolase and Adducin N-terminal domain CPU05_RS03400 PF02610 L-arabinose isomerase CPU05_RS03400 PF11762 L-arabinose isomerase C-terminal domain CPU05_RS03405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CPU05_RS03405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CPU05_RS03410 PF00291 Pyridoxal-phosphate dependent enzyme CPU05_RS03415 PF13520 Amino acid permease CPU05_RS03420 PF03169 OPT oligopeptide transporter protein CPU05_RS03430 PF03577 Peptidase family C69 CPU05_RS03455 PF02378 Phosphotransferase system, EIIC CPU05_RS03460 PF00704 Glycosyl hydrolases family 18 CPU05_RS03460 PF06483 Chitinase C CPU05_RS03475 PF02952 L-fucose isomerase, C-terminal domain CPU05_RS03475 PF07882 L-fucose isomerase, second N-terminal domain CPU05_RS03475 PF07881 L-fucose isomerase, first N-terminal domain CPU05_RS03480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPU05_RS03480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPU05_RS03485 PF00083 Sugar (and other) transporter CPU05_RS03490 PF05025 RbsD / FucU transport protein family CPU05_RS03500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPU05_RS03500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPU05_RS03505 PF17773 UPF0176 acylphosphatase like domain CPU05_RS03505 PF12368 Rhodanase C-terminal CPU05_RS03505 PF00581 Rhodanese-like domain CPU05_RS03510 PF02583 Metal-sensitive transcriptional repressor CPU05_RS03515 PF00465 Iron-containing alcohol dehydrogenase CPU05_RS03520 PF00239 Resolvase, N terminal domain CPU05_RS03520 PF02796 Helix-turn-helix domain of resolvase CPU05_RS03530 PF08240 Alcohol dehydrogenase GroES-like domain CPU05_RS03530 PF00107 Zinc-binding dehydrogenase CPU05_RS03540 PF07690 Major Facilitator Superfamily CPU05_RS03545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPU05_RS03545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPU05_RS03550 PF05336 L-rhamnose mutarotase CPU05_RS03555 PF06134 L-rhamnose isomerase (RhaA) CPU05_RS03560 PF00596 Class II Aldolase and Adducin N-terminal domain CPU05_RS03565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPU05_RS03570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPU05_RS03575 PF07748 Glycosyl hydrolases family 38 C-terminal domain CPU05_RS03575 PF09261 Alpha mannosidase middle domain CPU05_RS03575 PF01074 Glycosyl hydrolases family 38 N-terminal domain CPU05_RS03585 PF00232 Glycosyl hydrolase family 1 CPU05_RS03590 PF00480 ROK family CPU05_RS03605 PF07690 Major Facilitator Superfamily CPU05_RS03610 PF07702 UTRA domain CPU05_RS03610 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS03615 PF02378 Phosphotransferase system, EIIC CPU05_RS03645 PF02780 Transketolase, C-terminal domain CPU05_RS03645 PF02779 Transketolase, pyrimidine binding domain CPU05_RS03645 PF00456 Transketolase, thiamine diphosphate binding domain CPU05_RS03650 PF00923 Transaldolase/Fructose-6-phosphate aldolase CPU05_RS03655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPU05_RS03660 PF00356 Bacterial regulatory proteins, lacI family CPU05_RS03665 PF01263 Aldose 1-epimerase CPU05_RS03670 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPU05_RS03675 PF02929 Beta galactosidase small chain CPU05_RS03680 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CPU05_RS03680 PF00703 Glycosyl hydrolases family 2 CPU05_RS03680 PF02837 Glycosyl hydrolases family 2, sugar binding domain CPU05_RS03685 PF00288 GHMP kinases N terminal domain CPU05_RS03685 PF10509 Galactokinase galactose-binding signature CPU05_RS03685 PF08544 GHMP kinases C terminal CPU05_RS03690 PF16363 GDP-mannose 4,6 dehydratase CPU05_RS03695 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CPU05_RS03695 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CPU05_RS03705 PF13520 Amino acid permease CPU05_RS03730 PF00248 Aldo/keto reductase family CPU05_RS03735 PF05746 DALR anticodon binding domain CPU05_RS03735 PF03485 Arginyl tRNA synthetase N terminal domain CPU05_RS03735 PF00750 tRNA synthetases class I (R) CPU05_RS03745 PF02863 Arginine repressor, C-terminal domain CPU05_RS03745 PF01316 Arginine repressor, DNA binding domain CPU05_RS03750 PF00905 Penicillin binding protein transpeptidase domain CPU05_RS03750 PF00912 Transglycosylase CPU05_RS03755 PF06133 Control of competence regulator ComK, YlbF/YmcA CPU05_RS03760 PF00149 Calcineurin-like phosphoesterase CPU05_RS03765 PF13514 AAA domain CPU05_RS03770 PF01966 HD domain CPU05_RS03785 PF01230 HIT domain CPU05_RS03790 PF00005 ABC transporter CPU05_RS03795 PF05975 Bacterial ABC transporter protein EcsB CPU05_RS03800 PF02390 Putative methyltransferase CPU05_RS03810 PF01588 Putative tRNA binding domain CPU05_RS03810 PF14794 Domain of unknown function (DUF4479) CPU05_RS03815 PF09397 Ftsk gamma domain CPU05_RS03815 PF01580 FtsK/SpoIIIE family CPU05_RS03815 PF17854 FtsK alpha domain CPU05_RS03820 PF02875 Mur ligase family, glutamate ligase domain CPU05_RS03820 PF08245 Mur ligase middle domain CPU05_RS03820 PF01225 Mur ligase family, catalytic domain CPU05_RS03825 PF01027 Inhibitor of apoptosis-promoting Bax1 CPU05_RS03830 PF01367 5'-3' exonuclease, C-terminal SAM fold CPU05_RS03830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPU05_RS03830 PF00476 DNA polymerase family A CPU05_RS03840 PF01121 Dephospho-CoA kinase CPU05_RS03845 PF03477 ATP cone domain CPU05_RS03855 PF01695 IstB-like ATP binding protein CPU05_RS03855 PF07319 Primosomal protein DnaI N-terminus CPU05_RS03860 PF03129 Anticodon binding domain CPU05_RS03860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPU05_RS03860 PF02824 TGS domain CPU05_RS03865 PF06580 Histidine kinase CPU05_RS03865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPU05_RS03865 PF13492 GAF domain CPU05_RS03865 PF07694 5TMR of 5TMR-LYT CPU05_RS03870 PF04397 LytTr DNA-binding domain CPU05_RS03870 PF00072 Response regulator receiver domain CPU05_RS03875 PF03788 LrgA family CPU05_RS03880 PF04172 LrgB-like family CPU05_RS03885 PF00707 Translation initiation factor IF-3, C-terminal domain CPU05_RS03885 PF05198 Translation initiation factor IF-3, N-terminal domain CPU05_RS03890 PF01632 Ribosomal protein L35 CPU05_RS03895 PF00453 Ribosomal protein L20 CPU05_RS03905 PF01926 50S ribosome-binding GTPase CPU05_RS03910 PF01985 CRS1 / YhbY (CRM) domain CPU05_RS03915 PF01467 Cytidylyltransferase-like CPU05_RS03920 PF01966 HD domain CPU05_RS03930 PF13649 Methyltransferase domain CPU05_RS03935 PF05636 HIGH Nucleotidyl Transferase CPU05_RS03940 PF02620 Large ribosomal RNA subunit accumulation protein YceD CPU05_RS03945 PF01783 Ribosomal L32p protein family CPU05_RS03950 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CPU05_RS03950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPU05_RS03955 PF00072 Response regulator receiver domain CPU05_RS03955 PF00486 Transcriptional regulatory protein, C terminal CPU05_RS03960 PF18719 ArlS sensor domain CPU05_RS03960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPU05_RS03960 PF00512 His Kinase A (phospho-acceptor) domain CPU05_RS03965 PF07690 Major Facilitator Superfamily CPU05_RS03970 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain CPU05_RS03970 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain CPU05_RS03970 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain CPU05_RS03970 PF16347 Domain of unknown function (DUF4976) CPU05_RS03970 PF00884 Sulfatase CPU05_RS03975 PF02096 60Kd inner membrane protein CPU05_RS03980 PF00708 Acylphosphatase CPU05_RS03985 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPU05_RS03985 PF00588 SpoU rRNA Methylase family CPU05_RS03995 PF01638 HxlR-like helix-turn-helix CPU05_RS04000 PF01409 tRNA synthetases class II core domain (F) CPU05_RS04000 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CPU05_RS04005 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CPU05_RS04005 PF03483 B3/4 domain CPU05_RS04005 PF03484 tRNA synthetase B5 domain CPU05_RS04005 PF03147 Ferredoxin-fold anticodon binding domain CPU05_RS04005 PF01588 Putative tRNA binding domain CPU05_RS04010 PF02618 YceG-like family CPU05_RS04015 PF00485 Phosphoribulokinase / Uridine kinase family CPU05_RS04020 PF01272 Transcription elongation factor, GreA/GreB, C-term CPU05_RS04020 PF03449 Transcription elongation factor, N-terminal CPU05_RS04025 PF09586 Bacterial membrane protein YfhO CPU05_RS04030 PF00905 Penicillin binding protein transpeptidase domain CPU05_RS04030 PF03717 Penicillin-binding Protein dimerisation domain CPU05_RS04035 PF00471 Ribosomal protein L33 CPU05_RS04040 PF01812 5-formyltetrahydrofolate cyclo-ligase family CPU05_RS04045 PF01694 Rhomboid family CPU05_RS04055 PF00480 ROK family CPU05_RS04060 PF00581 Rhodanese-like domain CPU05_RS04070 PF03009 Glycerophosphoryl diester phosphodiesterase family CPU05_RS04080 PF06838 Methionine gamma-lyase CPU05_RS04085 PF13411 MerR HTH family regulatory protein CPU05_RS04090 PF00120 Glutamine synthetase, catalytic domain CPU05_RS04090 PF03951 Glutamine synthetase, beta-Grasp domain CPU05_RS04130 PF00829 Ribosomal prokaryotic L21 protein CPU05_RS04140 PF01016 Ribosomal L27 protein CPU05_RS04145 PF01132 Elongation factor P (EF-P) OB domain CPU05_RS04145 PF08207 Elongation factor P (EF-P) KOW-like domain CPU05_RS04145 PF09285 Elongation factor P, C-terminal CPU05_RS04150 PF03780 Asp23 family, cell envelope-related function CPU05_RS04155 PF01029 NusB family CPU05_RS04165 PF13742 OB-fold nucleic acid binding domain CPU05_RS04165 PF02601 Exonuclease VII, large subunit CPU05_RS04170 PF02609 Exonuclease VII small subunit CPU05_RS04175 PF00348 Polyprenyl synthetase CPU05_RS04180 PF01479 S4 domain CPU05_RS04180 PF01728 FtsJ-like methyltransferase CPU05_RS04185 PF01316 Arginine repressor, DNA binding domain CPU05_RS04185 PF02863 Arginine repressor, C-terminal domain CPU05_RS04190 PF02463 RecF/RecN/SMC N terminal domain CPU05_RS04200 PF00625 Guanylate kinase CPU05_RS04205 PF01192 RNA polymerase Rpb6 CPU05_RS04210 PF04127 DNA / pantothenate metabolism flavoprotein CPU05_RS04210 PF02441 Flavoprotein CPU05_RS04215 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CPU05_RS04215 PF17764 3′ DNA-binding domain (3′BD) CPU05_RS04215 PF18074 Primosomal protein N C-terminal domain CPU05_RS04215 PF00271 Helicase conserved C-terminal domain CPU05_RS04215 PF04851 Type III restriction enzyme, res subunit CPU05_RS04220 PF02911 Formyl transferase, C-terminal domain CPU05_RS04220 PF00551 Formyl transferase CPU05_RS04225 PF01029 NusB family CPU05_RS04225 PF01189 16S rRNA methyltransferase RsmB/F CPU05_RS04235 PF03793 PASTA domain CPU05_RS04235 PF00069 Protein kinase domain CPU05_RS04240 PF16745 RsgA N-terminal domain CPU05_RS04240 PF03193 RsgA GTPase CPU05_RS04245 PF00834 Ribulose-phosphate 3 epimerase family CPU05_RS04255 PF00830 Ribosomal L28 family CPU05_RS04260 PF03780 Asp23 family, cell envelope-related function CPU05_RS04265 PF02734 DAK2 domain CPU05_RS04265 PF13684 Dihydroxyacetone kinase family CPU05_RS04270 PF00270 DEAD/DEAH box helicase CPU05_RS04270 PF00271 Helicase conserved C-terminal domain CPU05_RS04270 PF17191 RecG wedge domain CPU05_RS04275 PF02504 Fatty acid synthesis protein CPU05_RS04280 PF00550 Phosphopantetheine attachment site CPU05_RS04285 PF14622 Ribonuclease-III-like CPU05_RS04285 PF00035 Double-stranded RNA binding motif CPU05_RS04290 PF02463 RecF/RecN/SMC N terminal domain CPU05_RS04290 PF06470 SMC proteins Flexible Hinge Domain CPU05_RS04295 PF00448 SRP54-type protein, GTPase domain CPU05_RS04295 PF02881 SRP54-type protein, helical bundle domain CPU05_RS04300 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CPU05_RS04305 PF00448 SRP54-type protein, GTPase domain CPU05_RS04305 PF02978 Signal peptide binding domain CPU05_RS04305 PF02881 SRP54-type protein, helical bundle domain CPU05_RS04310 PF00886 Ribosomal protein S16 CPU05_RS04315 PF01782 RimM N-terminal domain CPU05_RS04315 PF05239 PRC-barrel domain CPU05_RS04320 PF01746 tRNA (Guanine-1)-methyltransferase CPU05_RS04325 PF00005 ABC transporter CPU05_RS04330 PF03649 Uncharacterised protein family (UPF0014) CPU05_RS04335 PF01245 Ribosomal protein L19 CPU05_RS04345 PF01906 Putative heavy-metal-binding CPU05_RS04355 PF07977 FabA-like domain CPU05_RS04360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPU05_RS04360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPU05_RS04365 PF00550 Phosphopantetheine attachment site CPU05_RS04370 PF00698 Acyl transferase domain CPU05_RS04380 PF02801 Beta-ketoacyl synthase, C-terminal domain CPU05_RS04380 PF00109 Beta-ketoacyl synthase, N-terminal domain CPU05_RS04385 PF00364 Biotin-requiring enzyme CPU05_RS04390 PF07977 FabA-like domain CPU05_RS04395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPU05_RS04395 PF02785 Biotin carboxylase C-terminal domain CPU05_RS04395 PF00289 Biotin carboxylase, N-terminal domain CPU05_RS04400 PF01039 Carboxyl transferase domain CPU05_RS04405 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CPU05_RS04425 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CPU05_RS04425 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CPU05_RS04435 PF01726 LexA DNA binding domain CPU05_RS04435 PF00717 Peptidase S24-like CPU05_RS04440 PF05979 Bacterial protein of unknown function (DUF896) CPU05_RS04445 PF03672 Uncharacterised protein family (UPF0154) CPU05_RS04450 PF01553 Acyltransferase CPU05_RS04455 PF05175 Methyltransferase small domain CPU05_RS04460 PF01541 GIY-YIG catalytic domain CPU05_RS04465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPU05_RS04465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPU05_RS04470 PF00318 Ribosomal protein S2 CPU05_RS04475 PF00889 Elongation factor TS CPU05_RS04480 PF00696 Amino acid kinase family CPU05_RS04485 PF01765 Ribosome recycling factor CPU05_RS04490 PF01255 Putative undecaprenyl diphosphate synthase CPU05_RS04500 PF17820 PDZ domain CPU05_RS04500 PF02163 Peptidase family M50 CPU05_RS04505 PF04073 Aminoacyl-tRNA editing domain CPU05_RS04505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPU05_RS04505 PF03129 Anticodon binding domain CPU05_RS04510 PF11490 DNA polymerase III polC-type N-terminus II CPU05_RS04510 PF14579 Helix-hairpin-helix motif CPU05_RS04510 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPU05_RS04510 PF14480 DNA polymerase III polC-type N-terminus I CPU05_RS04510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPU05_RS04510 PF02811 PHP domain CPU05_RS04510 PF00929 Exonuclease CPU05_RS04515 PF17384 RimP C-terminal SH3 domain CPU05_RS04515 PF02576 RimP N-terminal domain CPU05_RS04520 PF00575 S1 RNA binding domain CPU05_RS04520 PF13184 NusA-like KH domain CPU05_RS04520 PF08529 NusA N-terminal domain CPU05_RS04525 PF04296 Protein of unknown function (DUF448) CPU05_RS04530 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CPU05_RS04535 PF11987 Translation-initiation factor 2 CPU05_RS04535 PF04760 Translation initiation factor IF-2, N-terminal region CPU05_RS04535 PF00009 Elongation factor Tu GTP binding domain CPU05_RS04540 PF02033 Ribosome-binding factor A CPU05_RS04550 PF16198 tRNA pseudouridylate synthase B C-terminal domain CPU05_RS04550 PF01509 TruB family pseudouridylate synthase (N terminal domain) CPU05_RS04555 PF01687 Riboflavin kinase CPU05_RS04555 PF06574 FAD synthetase CPU05_RS04560 PF08220 DeoR-like helix-turn-helix domain CPU05_RS04560 PF01628 HrcA protein C terminal domain CPU05_RS04565 PF01025 GrpE CPU05_RS04570 PF00012 Hsp70 protein CPU05_RS04575 PF01556 DnaJ C terminal domain CPU05_RS04575 PF00226 DnaJ domain CPU05_RS04575 PF00684 DnaJ central domain CPU05_RS04580 PF03073 TspO/MBR family CPU05_RS04585 PF04070 Domain of unknown function (DUF378) CPU05_RS04595 PF00005 ABC transporter CPU05_RS04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPU05_RS04610 PF03466 LysR substrate binding domain CPU05_RS04615 PF07690 Major Facilitator Superfamily CPU05_RS04620 PF08546 Ketopantoate reductase PanE/ApbA C terminal CPU05_RS04620 PF02558 Ketopantoate reductase PanE/ApbA CPU05_RS04625 PF06177 QueT transporter CPU05_RS04640 PF03641 Possible lysine decarboxylase CPU05_RS04645 PF12833 Helix-turn-helix domain CPU05_RS04645 PF02311 AraC-like ligand binding domain CPU05_RS04650 PF13520 Amino acid permease CPU05_RS04655 PF16353 Domain of unknown function(DUF4981) CPU05_RS04655 PF00703 Glycosyl hydrolases family 2 CPU05_RS04655 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CPU05_RS04655 PF02837 Glycosyl hydrolases family 2, sugar binding domain CPU05_RS04655 PF02929 Beta galactosidase small chain CPU05_RS04675 PF06421 GTP-binding protein LepA C-terminus CPU05_RS04675 PF00009 Elongation factor Tu GTP binding domain CPU05_RS04675 PF03144 Elongation factor Tu domain 2 CPU05_RS04675 PF00679 Elongation factor G C-terminus CPU05_RS04680 PF03577 Peptidase family C69 CPU05_RS04685 PF01361 Tautomerase enzyme CPU05_RS04695 PF01189 16S rRNA methyltransferase RsmB/F CPU05_RS04695 PF17126 RsmF rRNA methyltransferase first C-terminal domain CPU05_RS04695 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CPU05_RS04700 PF01070 FMN-dependent dehydrogenase CPU05_RS04705 PF08544 GHMP kinases C terminal CPU05_RS04705 PF00288 GHMP kinases N terminal domain CPU05_RS04715 PF10509 Galactokinase galactose-binding signature CPU05_RS04715 PF08544 GHMP kinases C terminal CPU05_RS04715 PF00288 GHMP kinases N terminal domain CPU05_RS04720 PF13307 Helicase C-terminal domain CPU05_RS04720 PF04851 Type III restriction enzyme, res subunit CPU05_RS04720 PF00929 Exonuclease CPU05_RS04730 PF07261 Replication initiation and membrane attachment CPU05_RS04735 PF00905 Penicillin binding protein transpeptidase domain CPU05_RS04735 PF00912 Transglycosylase CPU05_RS04740 PF03838 Recombination protein U CPU05_RS04745 PF06908 YspA SLOG family CPU05_RS04750 PF05103 DivIVA protein CPU05_RS04760 PF01170 Putative RNA methylase family UPF0020 CPU05_RS04760 PF02926 THUMP domain CPU05_RS04765 PF01266 FAD dependent oxidoreductase CPU05_RS04775 PF01268 Formate--tetrahydrofolate ligase CPU05_RS04780 PF01252 Signal peptidase (SPase) II CPU05_RS04785 PF00849 RNA pseudouridylate synthase CPU05_RS04785 PF01479 S4 domain CPU05_RS04790 PF00156 Phosphoribosyl transferase domain CPU05_RS04795 PF00117 Glutamine amidotransferase class-I CPU05_RS04795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPU05_RS04800 PF02142 MGS-like domain CPU05_RS04800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPU05_RS04800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPU05_RS04805 PF05670 NFACT protein RNA binding domain CPU05_RS04815 PF02645 Uncharacterised protein, DegV family COG1307 CPU05_RS04820 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPU05_RS04825 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPU05_RS04835 PF00356 Bacterial regulatory proteins, lacI family CPU05_RS04835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CPU05_RS04845 PF03606 C4-dicarboxylate anaerobic carrier CPU05_RS04850 PF03816 Cell envelope-related transcriptional attenuator domain CPU05_RS04855 PF00690 Cation transporter/ATPase, N-terminus CPU05_RS04855 PF00689 Cation transporting ATPase, C-terminus CPU05_RS04860 PF07690 Major Facilitator Superfamily CPU05_RS04870 PF00885 6,7-dimethyl-8-ribityllumazine synthase CPU05_RS04875 PF00925 GTP cyclohydrolase II CPU05_RS04875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CPU05_RS04880 PF00677 Lumazine binding domain CPU05_RS04885 PF01872 RibD C-terminal domain CPU05_RS04885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPU05_RS04895 PF01725 Ham1 family CPU05_RS04900 PF08245 Mur ligase middle domain CPU05_RS04905 PF01227 GTP cyclohydrolase I CPU05_RS04910 PF01227 GTP cyclohydrolase I CPU05_RS04910 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CPU05_RS04925 PF01625 Peptide methionine sulfoxide reductase CPU05_RS04930 PF01641 SelR domain CPU05_RS04935 PF02595 Glycerate kinase family CPU05_RS04940 PF02447 GntP family permease CPU05_RS04945 PF17760 UvrA interaction domain CPU05_RS04945 PF17755 UvrA DNA-binding domain CPU05_RS04945 PF00005 ABC transporter CPU05_RS04950 PF01368 DHH family CPU05_RS04950 PF02833 DHHA2 domain CPU05_RS04955 PF03466 LysR substrate binding domain CPU05_RS04955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPU05_RS04965 PF00204 DNA gyrase B CPU05_RS04965 PF01751 Toprim domain CPU05_RS04965 PF00986 DNA gyrase B subunit, carboxyl terminus CPU05_RS04965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPU05_RS04970 PF02660 Glycerol-3-phosphate acyltransferase CPU05_RS04975 PF13276 HTH-like domain CPU05_RS04975 PF13333 Integrase core domain CPU05_RS04975 PF00665 Integrase core domain CPU05_RS04980 PF01527 Transposase CPU05_RS04990 PF00004 ATPase family associated with various cellular activities (AAA) CPU05_RS04990 PF07724 AAA domain (Cdc48 subfamily) CPU05_RS04990 PF10431 C-terminal, D2-small domain, of ClpB protein CPU05_RS04995 PF00227 Proteasome subunit CPU05_RS05000 PF02899 Phage integrase, N-terminal SAM-like domain CPU05_RS05000 PF00589 Phage integrase family CPU05_RS05005 PF01131 DNA topoisomerase CPU05_RS05005 PF01396 Topoisomerase DNA binding C4 zinc finger CPU05_RS05005 PF01751 Toprim domain CPU05_RS05010 PF02481 DNA recombination-mediator protein A CPU05_RS05010 PF18255 DNA processing protein A sterile alpha motif domain CPU05_RS05015 PF01351 Ribonuclease HII CPU05_RS05020 PF01926 50S ribosome-binding GTPase CPU05_RS05030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPU05_RS05030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPU05_RS05035 PF07690 Major Facilitator Superfamily CPU05_RS05055 PF00108 Thiolase, N-terminal domain CPU05_RS05055 PF02803 Thiolase, C-terminal domain CPU05_RS05070 PF00580 UvrD/REP helicase N-terminal domain CPU05_RS05070 PF13361 UvrD-like helicase C-terminal domain CPU05_RS05090 PF00005 ABC transporter CPU05_RS05095 PF07724 AAA domain (Cdc48 subfamily) CPU05_RS05095 PF10431 C-terminal, D2-small domain, of ClpB protein CPU05_RS05095 PF17871 AAA lid domain CPU05_RS05095 PF00004 ATPase family associated with various cellular activities (AAA) CPU05_RS05120 PF00440 Bacterial regulatory proteins, tetR family CPU05_RS05130 PF02844 Phosphoribosylglycinamide synthetase, N domain CPU05_RS05130 PF02843 Phosphoribosylglycinamide synthetase, C domain CPU05_RS05130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPU05_RS05135 PF01808 AICARFT/IMPCHase bienzyme CPU05_RS05135 PF02142 MGS-like domain CPU05_RS05140 PF00551 Formyl transferase CPU05_RS05145 PF02769 AIR synthase related protein, C-terminal domain CPU05_RS05145 PF00586 AIR synthase related protein, N-terminal domain CPU05_RS05150 PF13537 Glutamine amidotransferase domain CPU05_RS05150 PF00156 Phosphoribosyl transferase domain CPU05_RS05155 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CPU05_RS05155 PF02769 AIR synthase related protein, C-terminal domain CPU05_RS05155 PF00586 AIR synthase related protein, N-terminal domain CPU05_RS05165 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CPU05_RS05170 PF01259 SAICAR synthetase CPU05_RS05175 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CPU05_RS05175 PF02222 ATP-grasp domain CPU05_RS05180 PF00731 AIR carboxylase CPU05_RS05200 PF00005 ABC transporter CPU05_RS05205 PF01381 Helix-turn-helix CPU05_RS05220 PF02581 Thiamine monophosphate synthase CPU05_RS05230 PF00899 ThiF family CPU05_RS05235 PF05690 Thiazole biosynthesis protein ThiG CPU05_RS05240 PF01546 Peptidase family M20/M25/M40 CPU05_RS05245 PF00375 Sodium:dicarboxylate symporter family CPU05_RS05255 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CPU05_RS05255 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CPU05_RS05260 PF04223 Citrate lyase, alpha subunit (CitF) CPU05_RS05265 PF03328 HpcH/HpaI aldolase/citrate lyase family CPU05_RS05270 PF06857 Malonate decarboxylase delta subunit (MdcD) CPU05_RS05275 PF08218 Citrate lyase ligase C-terminal domain CPU05_RS05285 PF03949 Malic enzyme, NAD binding domain CPU05_RS05285 PF00390 Malic enzyme, N-terminal domain CPU05_RS05295 PF00334 Nucleoside diphosphate kinase CPU05_RS05305 PF13333 Integrase core domain CPU05_RS05305 PF00665 Integrase core domain CPU05_RS05305 PF13276 HTH-like domain CPU05_RS05310 PF01527 Transposase CPU05_RS05360 PF00232 Glycosyl hydrolase family 1 CPU05_RS05365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPU05_RS05365 PF00367 phosphotransferase system, EIIB CPU05_RS05365 PF02378 Phosphotransferase system, EIIC CPU05_RS05370 PF00874 PRD domain CPU05_RS05370 PF03123 CAT RNA binding domain CPU05_RS05380 PF13520 Amino acid permease CPU05_RS05385 PF03960 ArsC family CPU05_RS05390 PF03572 Peptidase family S41 CPU05_RS05390 PF17820 PDZ domain CPU05_RS05390 PF01471 Putative peptidoglycan binding domain CPU05_RS05395 PF06855 YozE SAM-like fold CPU05_RS05405 PF13472 GDSL-like Lipase/Acylhydrolase family CPU05_RS05410 PF02645 Uncharacterised protein, DegV family COG1307 CPU05_RS05420 PF00186 Dihydrofolate reductase CPU05_RS05425 PF00303 Thymidylate synthase CPU05_RS05430 PF00005 ABC transporter CPU05_RS05430 PF16326 ABC transporter C-terminal domain CPU05_RS05430 PF12848 ABC transporter CPU05_RS05435 PF12627 Probable RNA and SrmB- binding site of polymerase A CPU05_RS05435 PF01743 Poly A polymerase head domain CPU05_RS05435 PF13735 tRNA nucleotidyltransferase domain 2 putative CPU05_RS05440 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPU05_RS05440 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPU05_RS05460 PF00216 Bacterial DNA-binding protein CPU05_RS05465 PF01926 50S ribosome-binding GTPase CPU05_RS05465 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CPU05_RS05470 PF00575 S1 RNA binding domain CPU05_RS05475 PF02224 Cytidylate kinase CPU05_RS05485 PF00271 Helicase conserved C-terminal domain CPU05_RS05485 PF00270 DEAD/DEAH box helicase CPU05_RS05495 PF01479 S4 domain CPU05_RS05495 PF00849 RNA pseudouridylate synthase CPU05_RS05500 PF04079 Segregation and condensation complex subunit ScpB CPU05_RS05505 PF02616 Segregation and condensation protein ScpA CPU05_RS05515 PF02899 Phage integrase, N-terminal SAM-like domain CPU05_RS05515 PF00589 Phage integrase family CPU05_RS05525 PF04284 Protein of unknown function (DUF441) CPU05_RS05530 PF02887 Pyruvate kinase, alpha/beta domain CPU05_RS05530 PF00224 Pyruvate kinase, barrel domain CPU05_RS05530 PF00391 PEP-utilising enzyme, mobile domain CPU05_RS05535 PF00365 Phosphofructokinase CPU05_RS05550 PF17871 AAA lid domain CPU05_RS05550 PF02861 Clp amino terminal domain, pathogenicity island component CPU05_RS05550 PF10431 C-terminal, D2-small domain, of ClpB protein CPU05_RS05550 PF07724 AAA domain (Cdc48 subfamily) CPU05_RS05550 PF00004 ATPase family associated with various cellular activities (AAA) CPU05_RS05555 PF01784 NIF3 (NGG1p interacting factor 3) CPU05_RS05560 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CPU05_RS05565 PF00140 Sigma-70 factor, region 1.2 CPU05_RS05565 PF04542 Sigma-70 region 2 CPU05_RS05565 PF04545 Sigma-70, region 4 CPU05_RS05565 PF04539 Sigma-70 region 3 CPU05_RS05565 PF03979 Sigma-70 factor, region 1.1 CPU05_RS05570 PF10410 DnaB-helicase binding domain of primase CPU05_RS05570 PF08275 DNA primase catalytic core, N-terminal domain CPU05_RS05570 PF01807 CHC2 zinc finger CPU05_RS05575 PF02092 Glycyl-tRNA synthetase beta subunit CPU05_RS05575 PF05746 DALR anticodon binding domain CPU05_RS05580 PF02091 Glycyl-tRNA synthetase alpha subunit CPU05_RS05585 PF11967 Recombination protein O N terminal CPU05_RS05585 PF02565 Recombination protein O C terminal CPU05_RS05590 PF01926 50S ribosome-binding GTPase CPU05_RS05590 PF07650 KH domain CPU05_RS05600 PF02130 Uncharacterized protein family UPF0054 CPU05_RS05605 PF02562 PhoH-like protein CPU05_RS05615 PF01165 Ribosomal protein S21 CPU05_RS05620 PF03618 Kinase/pyrophosphorylase CPU05_RS05630 PF01261 Xylose isomerase-like TIM barrel CPU05_RS05635 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CPU05_RS05640 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CPU05_RS05650 PF02938 GAD domain CPU05_RS05650 PF01336 OB-fold nucleic acid binding domain CPU05_RS05650 PF00152 tRNA synthetases class II (D, K and N) CPU05_RS05655 PF13393 Histidyl-tRNA synthetase CPU05_RS05655 PF03129 Anticodon binding domain CPU05_RS05660 PF08239 Bacterial SH3 domain CPU05_RS05660 PF01520 N-acetylmuramoyl-L-alanine amidase CPU05_RS05665 PF13419 Haloacid dehalogenase-like hydrolase CPU05_RS05670 PF02580 D-Tyr-tRNA(Tyr) deacylase CPU05_RS05675 PF02824 TGS domain CPU05_RS05675 PF04607 Region found in RelA / SpoT proteins CPU05_RS05675 PF13291 ACT domain CPU05_RS05685 PF04452 RNA methyltransferase CPU05_RS05695 PF00860 Permease family CPU05_RS05715 PF00155 Aminotransferase class I and II CPU05_RS05720 PF16363 GDP-mannose 4,6 dehydratase CPU05_RS05730 PF13673 Acetyltransferase (GNAT) domain CPU05_RS05735 PF00005 ABC transporter CPU05_RS05735 PF00664 ABC transporter transmembrane region CPU05_RS05745 PF00881 Nitroreductase family CPU05_RS05765 PF00194 Eukaryotic-type carbonic anhydrase CPU05_RS05770 PF01070 FMN-dependent dehydrogenase CPU05_RS05960 PF05866 Endodeoxyribonuclease RusA CPU05_RS05970 PF01695 IstB-like ATP binding protein CPU05_RS05990 PF00436 Single-strand binding protein family CPU05_RS06035 PF01381 Helix-turn-helix CPU05_RS06080 PF04226 Transglycosylase associated protein CPU05_RS06085 PF06736 Protein of unknown function (DUF1211) CPU05_RS06095 PF01546 Peptidase family M20/M25/M40 CPU05_RS06095 PF07687 Peptidase dimerisation domain CPU05_RS06110 PF00199 Catalase CPU05_RS06110 PF06628 Catalase-related immune-responsive CPU05_RS06135 PF00156 Phosphoribosyl transferase domain CPU05_RS06140 PF01368 DHH family CPU05_RS06140 PF02272 DHHA1 domain CPU05_RS06140 PF17768 RecJ OB domain CPU05_RS06140 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CPU05_RS06145 PF00106 short chain dehydrogenase CPU05_RS06150 PF00753 Metallo-beta-lactamase superfamily CPU05_RS06160 PF01926 50S ribosome-binding GTPase CPU05_RS06160 PF01018 GTP1/OBG CPU05_RS06160 PF09269 Domain of unknown function (DUF1967) CPU05_RS06165 PF01541 GIY-YIG catalytic domain CPU05_RS06165 PF02151 UvrB/uvrC motif CPU05_RS06165 PF08459 UvrC Helix-hairpin-helix N-terminal CPU05_RS06170 PF00005 ABC transporter CPU05_RS06175 PF00528 Binding-protein-dependent transport system inner membrane component CPU05_RS06185 PF01926 50S ribosome-binding GTPase CPU05_RS06190 PF07724 AAA domain (Cdc48 subfamily) CPU05_RS06190 PF10431 C-terminal, D2-small domain, of ClpB protein CPU05_RS06190 PF06689 ClpX C4-type zinc finger CPU05_RS06195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPU05_RS06195 PF05698 Bacterial trigger factor protein (TF) C-terminus CPU05_RS06195 PF05697 Bacterial trigger factor protein (TF) CPU05_RS06200 PF03143 Elongation factor Tu C-terminal domain CPU05_RS06200 PF03144 Elongation factor Tu domain 2 CPU05_RS06200 PF00009 Elongation factor Tu GTP binding domain CPU05_RS06210 PF17770 Ribonuclease J C-terminal domain CPU05_RS06210 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPU05_RS06210 PF00753 Metallo-beta-lactamase superfamily CPU05_RS06215 PF00312 Ribosomal protein S15 CPU05_RS06220 PF01649 Ribosomal protein S20 CPU05_RS06235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPU05_RS06240 PF10531 SLBB domain CPU05_RS06245 PF01467 Cytidylyltransferase-like CPU05_RS06255 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CPU05_RS06260 PF01098 Cell cycle protein CPU05_RS06265 PF14492 Elongation Factor G, domain II CPU05_RS06265 PF03144 Elongation factor Tu domain 2 CPU05_RS06265 PF00679 Elongation factor G C-terminus CPU05_RS06265 PF00009 Elongation factor Tu GTP binding domain CPU05_RS06270 PF00459 Inositol monophosphatase family CPU05_RS06275 PF05256 Uncharacterised protein family (UPF0223) CPU05_RS06280 PF01327 Polypeptide deformylase CPU05_RS06290 PF07288 Protein of unknown function (DUF1447) CPU05_RS06295 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPU05_RS06295 PF17770 Ribonuclease J C-terminal domain CPU05_RS06295 PF00753 Metallo-beta-lactamase superfamily CPU05_RS06300 PF00877 NlpC/P60 family CPU05_RS06305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPU05_RS06305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPU05_RS06310 PF00294 pfkB family carbohydrate kinase CPU05_RS06315 PF00455 DeoR C terminal sensor domain CPU05_RS06315 PF08220 DeoR-like helix-turn-helix domain CPU05_RS06320 PF01594 AI-2E family transporter CPU05_RS06325 PF14572 Phosphoribosyl synthetase-associated domain CPU05_RS06325 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPU05_RS06330 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CPU05_RS06330 PF14490 Helix-hairpin-helix containing domain CPU05_RS06330 PF13538 UvrD-like helicase C-terminal domain CPU05_RS06355 PF00266 Aminotransferase class-V CPU05_RS06360 PF01048 Phosphorylase superfamily CPU05_RS06370 PF00293 NUDIX domain CPU05_RS06375 PF00313 'Cold-shock' DNA-binding domain CPU05_RS06380 PF00133 tRNA synthetases class I (I, L, M and V) CPU05_RS06380 PF08264 Anticodon-binding domain of tRNA CPU05_RS06380 PF06827 Zinc finger found in FPG and IleRS CPU05_RS06385 PF05103 DivIVA protein CPU05_RS06390 PF17774 Putative RNA-binding domain in YlmH CPU05_RS06390 PF01479 S4 domain CPU05_RS06405 PF11983 Membrane-attachment and polymerisation-promoting switch CPU05_RS06405 PF02491 SHS2 domain inserted in FTSA CPU05_RS06410 PF08478 POTRA domain, FtsQ-type CPU05_RS06410 PF03799 Cell division protein FtsQ CPU05_RS06415 PF03033 Glycosyltransferase family 28 N-terminal domain CPU05_RS06415 PF04101 Glycosyltransferase family 28 C-terminal domain CPU05_RS06420 PF02875 Mur ligase family, glutamate ligase domain CPU05_RS06420 PF08245 Mur ligase middle domain CPU05_RS06420 PF01225 Mur ligase family, catalytic domain CPU05_RS06425 PF00953 Glycosyl transferase family 4 CPU05_RS06430 PF00905 Penicillin binding protein transpeptidase domain CPU05_RS06430 PF03717 Penicillin-binding Protein dimerisation domain CPU05_RS06430 PF03793 PASTA domain CPU05_RS06440 PF01795 MraW methylase family CPU05_RS06445 PF02381 MraZ protein, putative antitoxin-like CPU05_RS06455 PF01580 FtsK/SpoIIIE family CPU05_RS06455 PF09397 Ftsk gamma domain CPU05_RS06455 PF17854 FtsK alpha domain CPU05_RS06460 PF00588 SpoU rRNA Methylase family CPU05_RS06465 PF01594 AI-2E family transporter CPU05_RS06475 PF10282 Lactonase, 7-bladed beta-propeller CPU05_RS06480 PF03932 CutC family CPU05_RS06485 PF00571 CBS domain CPU05_RS06485 PF03448 MgtE intracellular N domain CPU05_RS06485 PF01769 Divalent cation transporter CPU05_RS06490 PF00849 RNA pseudouridylate synthase CPU05_RS06515 PF05389 Negative regulator of genetic competence (MecA) CPU05_RS06520 PF03960 ArsC family CPU05_RS06525 PF12706 Beta-lactamase superfamily domain CPU05_RS06605 PF00013 KH domain CPU05_RS06605 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CPU05_RS06605 PF01138 3' exoribonuclease family, domain 1 CPU05_RS06605 PF03725 3' exoribonuclease family, domain 2 CPU05_RS06605 PF00575 S1 RNA binding domain CPU05_RS06610 PF09335 SNARE associated Golgi protein CPU05_RS06620 PF13344 Haloacid dehalogenase-like hydrolase CPU05_RS06625 PF06265 Protein of unknown function (DUF1027) CPU05_RS06635 PF02384 N-6 DNA Methylase CPU05_RS06660 PF07963 Prokaryotic N-terminal methylation motif CPU05_RS06665 PF00482 Type II secretion system (T2SS), protein F CPU05_RS06670 PF00437 Type II/IV secretion system protein CPU05_RS06675 PF00294 pfkB family carbohydrate kinase CPU05_RS06675 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CPU05_RS06680 PF01709 Transcriptional regulator CPU05_RS06685 PF07732 Multicopper oxidase CPU05_RS06685 PF07731 Multicopper oxidase CPU05_RS06690 PF09285 Elongation factor P, C-terminal CPU05_RS06690 PF01132 Elongation factor P (EF-P) OB domain CPU05_RS06690 PF08207 Elongation factor P (EF-P) KOW-like domain CPU05_RS06695 PF00857 Isochorismatase family CPU05_RS06700 PF10397 Adenylosuccinate lyase C-terminus CPU05_RS06700 PF00206 Lyase CPU05_RS06705 PF00709 Adenylosuccinate synthetase CPU05_RS06725 PF00230 Major intrinsic protein CPU05_RS06730 PF00356 Bacterial regulatory proteins, lacI family CPU05_RS06735 PF00557 Metallopeptidase family M24 CPU05_RS06735 PF01321 Creatinase/Prolidase N-terminal domain CPU05_RS06750 PF00924 Mechanosensitive ion channel CPU05_RS06755 PF01725 Ham1 family CPU05_RS06760 PF01177 Asp/Glu/Hydantoin racemase CPU05_RS06765 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CPU05_RS06765 PF02896 PEP-utilising enzyme, TIM barrel domain CPU05_RS06765 PF00391 PEP-utilising enzyme, mobile domain CPU05_RS06770 PF00085 Thioredoxin CPU05_RS06775 PF00488 MutS domain V CPU05_RS06775 PF01713 Smr domain CPU05_RS06780 PF06949 Protein of unknown function (DUF1292) CPU05_RS06785 PF03652 Holliday junction resolvase CPU05_RS06790 PF06135 IreB regulatory phosphoprotein CPU05_RS06795 PF01411 tRNA synthetases class II (A) CPU05_RS06795 PF02272 DHHA1 domain CPU05_RS06795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPU05_RS06800 PF00270 DEAD/DEAH box helicase CPU05_RS06800 PF00271 Helicase conserved C-terminal domain CPU05_RS06805 PF01368 DHH family CPU05_RS06805 PF02272 DHHA1 domain CPU05_RS06810 PF00817 impB/mucB/samB family CPU05_RS06810 PF11799 impB/mucB/samB family C-terminal domain CPU05_RS06815 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CPU05_RS06815 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CPU05_RS06820 PF02699 Preprotein translocase subunit CPU05_RS06830 PF02547 Queuosine biosynthesis protein CPU05_RS06835 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPU05_RS06835 PF05491 RuvB C-terminal winged helix domain CPU05_RS06835 PF17864 RuvB AAA lid domain CPU05_RS06840 PF01330 RuvA N terminal domain CPU05_RS06840 PF07499 RuvA, C-terminal domain CPU05_RS06845 PF01119 DNA mismatch repair protein, C-terminal domain CPU05_RS06845 PF08676 MutL C terminal dimerisation domain CPU05_RS06850 PF05188 MutS domain II CPU05_RS06850 PF01624 MutS domain I CPU05_RS06850 PF05192 MutS domain III CPU05_RS06850 PF05190 MutS family domain IV CPU05_RS06850 PF00488 MutS domain V CPU05_RS06855 PF12072 Domain of unknown function (DUF3552) CPU05_RS06855 PF00013 KH domain CPU05_RS06855 PF01966 HD domain CPU05_RS06860 PF00154 recA bacterial DNA recombination protein CPU05_RS06870 PF01066 CDP-alcohol phosphatidyltransferase CPU05_RS06885 PF05193 Peptidase M16 inactive domain CPU05_RS06885 PF00675 Insulinase (Peptidase family M16) CPU05_RS06890 PF05193 Peptidase M16 inactive domain CPU05_RS06895 PF13396 Phospholipase_D-nuclease N-terminal CPU05_RS06895 PF13091 PLD-like domain CPU05_RS06905 PF00005 ABC transporter CPU05_RS06910 PF00528 Binding-protein-dependent transport system inner membrane component CPU05_RS06925 PF04002 RadC-like JAB domain CPU05_RS06935 PF10458 Valyl tRNA synthetase tRNA binding arm CPU05_RS06935 PF00133 tRNA synthetases class I (I, L, M and V) CPU05_RS06935 PF08264 Anticodon-binding domain of tRNA CPU05_RS06940 PF08534 Redoxin CPU05_RS06945 PF02926 THUMP domain CPU05_RS06945 PF02568 Thiamine biosynthesis protein (ThiI) CPU05_RS06950 PF00266 Aminotransferase class-V CPU05_RS06955 PF06160 Septation ring formation regulator, EzrA CPU05_RS06960 PF13185 GAF domain CPU05_RS06965 PF01479 S4 domain CPU05_RS06965 PF00163 Ribosomal protein S4/S9 N-terminal domain CPU05_RS06970 PF16193 AAA C-terminal domain CPU05_RS06970 PF12002 MgsA AAA+ ATPase C terminal CPU05_RS06970 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPU05_RS06985 PF00582 Universal stress protein family CPU05_RS07000 PF01820 D-ala D-ala ligase N-terminus CPU05_RS07000 PF07478 D-ala D-ala ligase C-terminus CPU05_RS07010 PF13520 Amino acid permease CPU05_RS07025 PF00005 ABC transporter CPU05_RS07030 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS07040 PF03180 NLPA lipoprotein CPU05_RS07045 PF00528 Binding-protein-dependent transport system inner membrane component CPU05_RS07050 PF00005 ABC transporter CPU05_RS07050 PF09383 NIL domain CPU05_RS07065 PF01809 Putative membrane protein insertion efficiency factor CPU05_RS07070 PF06612 Protein of unknown function (DUF1146) CPU05_RS07075 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CPU05_RS07075 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CPU05_RS07080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPU05_RS07080 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPU05_RS07085 PF00231 ATP synthase CPU05_RS07090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPU05_RS07090 PF00306 ATP synthase alpha/beta chain, C terminal domain CPU05_RS07090 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPU05_RS07095 PF00213 ATP synthase delta (OSCP) subunit CPU05_RS07100 PF00430 ATP synthase B/B' CF(0) CPU05_RS07105 PF00137 ATP synthase subunit C CPU05_RS07110 PF00119 ATP synthase A chain CPU05_RS07120 PF00005 ABC transporter CPU05_RS07135 PF00464 Serine hydroxymethyltransferase CPU05_RS07140 PF03481 Putative GTP-binding controlling metal-binding CPU05_RS07140 PF01300 Telomere recombination CPU05_RS07145 PF05175 Methyltransferase small domain CPU05_RS07145 PF17827 PrmC N-terminal domain CPU05_RS07150 PF00472 RF-1 domain CPU05_RS07150 PF03462 PCRF domain CPU05_RS07155 PF00265 Thymidine kinase CPU05_RS07160 PF08245 Mur ligase middle domain CPU05_RS07160 PF08353 Domain of unknown function (DUF1727) CPU05_RS07165 PF07685 CobB/CobQ-like glutamine amidotransferase domain CPU05_RS07170 PF01238 Phosphomannose isomerase type I CPU05_RS07175 PF00144 Beta-lactamase CPU05_RS07180 PF00664 ABC transporter transmembrane region CPU05_RS07180 PF00005 ABC transporter CPU05_RS07185 PF00005 ABC transporter CPU05_RS07185 PF00664 ABC transporter transmembrane region CPU05_RS07200 PF03449 Transcription elongation factor, N-terminal CPU05_RS07200 PF01272 Transcription elongation factor, GreA/GreB, C-term CPU05_RS07220 PF03358 NADPH-dependent FMN reductase CPU05_RS07220 PF00890 FAD binding domain CPU05_RS07220 PF04205 FMN-binding domain CPU05_RS07225 PF00890 FAD binding domain CPU05_RS07225 PF03358 NADPH-dependent FMN reductase CPU05_RS07225 PF04205 FMN-binding domain CPU05_RS07235 PF00342 Phosphoglucose isomerase CPU05_RS07240 PF06800 Sugar transport protein CPU05_RS07245 PF01116 Fructose-bisphosphate aldolase class-II CPU05_RS07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPU05_RS07250 PF00512 His Kinase A (phospho-acceptor) domain CPU05_RS07250 PF00672 HAMP domain CPU05_RS07255 PF00486 Transcriptional regulatory protein, C terminal CPU05_RS07255 PF00072 Response regulator receiver domain CPU05_RS07265 PF05257 CHAP domain CPU05_RS07265 PF01476 LysM domain CPU05_RS07270 PF01464 Transglycosylase SLT domain CPU05_RS07280 PF02447 GntP family permease CPU05_RS07285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPU05_RS07285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPU05_RS07290 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CPU05_RS07290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPU05_RS07295 PF01418 Helix-turn-helix domain, rpiR family CPU05_RS07295 PF01380 SIS domain CPU05_RS07310 PF00534 Glycosyl transferases group 1 CPU05_RS07330 PF00344 SecY translocase CPU05_RS07335 PF07516 SecA Wing and Scaffold domain CPU05_RS07335 PF01043 SecA preprotein cross-linking domain CPU05_RS07335 PF07517 SecA DEAD-like domain CPU05_RS07355 PF01925 Sulfite exporter TauE/SafE CPU05_RS07360 PF00884 Sulfatase CPU05_RS07365 PF00009 Elongation factor Tu GTP binding domain CPU05_RS07365 PF03144 Elongation factor Tu domain 2 CPU05_RS07365 PF16658 Class II release factor RF3, C-terminal domain CPU05_RS07370 PF01467 Cytidylyltransferase-like CPU05_RS07375 PF01594 AI-2E family transporter CPU05_RS07380 PF04167 Protein of unknown function (DUF402) CPU05_RS07385 PF02631 RecX family CPU05_RS07390 PF00258 Flavodoxin CPU05_RS07410 PF00589 Phage integrase family CPU05_RS07410 PF02899 Phage integrase, N-terminal SAM-like domain CPU05_RS07420 PF18766 SWI2/SNF2 ATPase CPU05_RS07420 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CPU05_RS07420 PF12008 Type I restriction and modification enzyme - subunit R C terminal CPU05_RS07425 PF01420 Type I restriction modification DNA specificity domain CPU05_RS07430 PF02384 N-6 DNA Methylase CPU05_RS07430 PF12161 HsdM N-terminal domain CPU05_RS07475 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPU05_RS07475 PF00476 DNA polymerase family A CPU05_RS07475 PF01612 3'-5' exonuclease CPU05_RS07475 PF01367 5'-3' exonuclease, C-terminal SAM fold CPU05_RS07515 PF01555 DNA methylase CPU05_RS07530 PF03354 Phage Terminase CPU05_RS07540 PF04860 Phage portal protein CPU05_RS07565 PF05105 Bacteriophage holin family CPU05_RS07600 PF05958 tRNA (Uracil-5-)-methyltransferase CPU05_RS07600 PF01938 TRAM domain CPU05_RS07605 PF00781 Diacylglycerol kinase catalytic domain CPU05_RS07615 PF01425 Amidase CPU05_RS07620 PF02686 Glu-tRNAGln amidotransferase C subunit CPU05_RS07625 PF07537 CamS sex pheromone cAM373 precursor CPU05_RS07635 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CPU05_RS07635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPU05_RS07635 PF02222 ATP-grasp domain CPU05_RS07645 PF13457 GW (Gly-Tryp) dipeptide domain CPU05_RS07645 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CPU05_RS07685 PF11798 IMS family HHH motif CPU05_RS07685 PF11799 impB/mucB/samB family C-terminal domain CPU05_RS07685 PF00817 impB/mucB/samB family CPU05_RS07700 PF13520 Amino acid permease CPU05_RS07705 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CPU05_RS07705 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CPU05_RS07710 PF04024 PspC domain CPU05_RS07720 PF13732 Domain of unknown function (DUF4162) CPU05_RS07720 PF00005 ABC transporter CPU05_RS07745 PF00380 Ribosomal protein S9/S16 CPU05_RS07750 PF00572 Ribosomal protein L13 CPU05_RS07755 PF01416 tRNA pseudouridine synthase CPU05_RS07760 PF02361 Cobalt transport protein CPU05_RS07765 PF00005 ABC transporter CPU05_RS07770 PF00005 ABC transporter CPU05_RS07775 PF01196 Ribosomal protein L17 CPU05_RS07780 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CPU05_RS07780 PF01000 RNA polymerase Rpb3/RpoA insert domain CPU05_RS07780 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CPU05_RS07785 PF00411 Ribosomal protein S11 CPU05_RS07790 PF00416 Ribosomal protein S13/S18 CPU05_RS07795 PF00444 Ribosomal protein L36 CPU05_RS07800 PF01176 Translation initiation factor 1A / IF-1 CPU05_RS07805 PF05191 Adenylate kinase, active site lid CPU05_RS07810 PF00344 SecY translocase CPU05_RS07815 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CPU05_RS07820 PF00327 Ribosomal protein L30p/L7e CPU05_RS07825 PF00333 Ribosomal protein S5, N-terminal domain CPU05_RS07825 PF03719 Ribosomal protein S5, C-terminal domain CPU05_RS07830 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CPU05_RS07835 PF00347 Ribosomal protein L6 CPU05_RS07840 PF00410 Ribosomal protein S8 CPU05_RS07845 PF00253 Ribosomal protein S14p/S29e CPU05_RS07850 PF00281 Ribosomal protein L5 CPU05_RS07850 PF00673 ribosomal L5P family C-terminus CPU05_RS07855 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CPU05_RS07855 PF00467 KOW motif CPU05_RS07860 PF00238 Ribosomal protein L14p/L23e CPU05_RS07865 PF00366 Ribosomal protein S17 CPU05_RS07870 PF00831 Ribosomal L29 protein CPU05_RS07875 PF00252 Ribosomal protein L16p/L10e CPU05_RS07880 PF07650 KH domain CPU05_RS07880 PF00189 Ribosomal protein S3, C-terminal domain CPU05_RS07885 PF00237 Ribosomal protein L22p/L17e CPU05_RS07890 PF00203 Ribosomal protein S19 CPU05_RS07895 PF00181 Ribosomal Proteins L2, RNA binding domain CPU05_RS07895 PF03947 Ribosomal Proteins L2, C-terminal domain CPU05_RS07900 PF00276 Ribosomal protein L23 CPU05_RS07905 PF00573 Ribosomal protein L4/L1 family CPU05_RS07910 PF00297 Ribosomal protein L3 CPU05_RS07915 PF00338 Ribosomal protein S10p/S20e CPU05_RS07925 PF00009 Elongation factor Tu GTP binding domain CPU05_RS07925 PF03144 Elongation factor Tu domain 2 CPU05_RS07925 PF03764 Elongation factor G, domain IV CPU05_RS07925 PF14492 Elongation Factor G, domain II CPU05_RS07925 PF00679 Elongation factor G C-terminus CPU05_RS07930 PF00177 Ribosomal protein S7p/S5e CPU05_RS07935 PF00164 Ribosomal protein S12/S23 CPU05_RS07945 PF01156 Inosine-uridine preferring nucleoside hydrolase CPU05_RS07950 PF04997 RNA polymerase Rpb1, domain 1 CPU05_RS07950 PF00623 RNA polymerase Rpb1, domain 2 CPU05_RS07950 PF04983 RNA polymerase Rpb1, domain 3 CPU05_RS07950 PF05000 RNA polymerase Rpb1, domain 4 CPU05_RS07950 PF04998 RNA polymerase Rpb1, domain 5 CPU05_RS07955 PF04560 RNA polymerase Rpb2, domain 7 CPU05_RS07955 PF00562 RNA polymerase Rpb2, domain 6 CPU05_RS07955 PF10385 RNA polymerase beta subunit external 1 domain CPU05_RS07955 PF04563 RNA polymerase beta subunit CPU05_RS07955 PF04565 RNA polymerase Rpb2, domain 3 CPU05_RS07955 PF04561 RNA polymerase Rpb2, domain 2 CPU05_RS07960 PF10431 C-terminal, D2-small domain, of ClpB protein CPU05_RS07960 PF07724 AAA domain (Cdc48 subfamily) CPU05_RS07960 PF02861 Clp amino terminal domain, pathogenicity island component CPU05_RS07960 PF00004 ATPase family associated with various cellular activities (AAA) CPU05_RS07960 PF17871 AAA lid domain CPU05_RS07965 PF17727 CtsR C-terminal dimerization domain CPU05_RS07965 PF05848 CtsR N-terminal HTH domain CPU05_RS07970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPU05_RS07970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPU05_RS07970 PF00205 Thiamine pyrophosphate enzyme, central domain CPU05_RS08015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPU05_RS08015 PF02403 Seryl-tRNA synthetase N-terminal domain CPU05_RS08020 PF01712 Deoxynucleoside kinase CPU05_RS08025 PF00324 Amino acid permease CPU05_RS08040 PF03816 Cell envelope-related transcriptional attenuator domain CPU05_RS08050 PF06738 Putative threonine/serine exporter CPU05_RS08055 PF00313 'Cold-shock' DNA-binding domain CPU05_RS08060 PF01545 Cation efflux family CPU05_RS08070 PF01966 HD domain CPU05_RS08075 PF12072 Domain of unknown function (DUF3552) CPU05_RS08075 PF00013 KH domain CPU05_RS08075 PF01966 HD domain CPU05_RS08085 PF00849 RNA pseudouridylate synthase CPU05_RS08090 PF07155 ECF-type riboflavin transporter, S component CPU05_RS08095 PF00860 Permease family CPU05_RS08100 PF03577 Peptidase family C69 CPU05_RS08110 PF00005 ABC transporter CPU05_RS08110 PF13732 Domain of unknown function (DUF4162) CPU05_RS08115 PF01381 Helix-turn-helix CPU05_RS08140 PF06971 Putative DNA-binding protein N-terminus CPU05_RS08140 PF02629 CoA binding domain CPU05_RS08145 PF00144 Beta-lactamase CPU05_RS08150 PF00814 Glycoprotease family CPU05_RS08160 PF00814 Glycoprotease family CPU05_RS08165 PF16363 GDP-mannose 4,6 dehydratase CPU05_RS08175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPU05_RS08180 PF06156 Initiation control protein YabA CPU05_RS08185 PF09115 DNA polymerase III, delta subunit, C terminal CPU05_RS08190 PF06153 Cyclic-di-AMP receptor CPU05_RS08195 PF02223 Thymidylate kinase CPU05_RS08200 PF13662 Toprim domain CPU05_RS08200 PF02132 RecR protein CPU05_RS08205 PF02575 YbaB/EbfC DNA-binding family CPU05_RS08210 PF12169 DNA polymerase III subunits gamma and tau domain III CPU05_RS08220 PF14437 MafB19-like deaminase CPU05_RS08225 PF05175 Methyltransferase small domain CPU05_RS08230 PF00462 Glutaredoxin CPU05_RS08235 PF00317 Ribonucleotide reductase, all-alpha domain CPU05_RS08235 PF08343 Ribonucleotide reductase N-terminal CPU05_RS08235 PF02867 Ribonucleotide reductase, barrel domain CPU05_RS08240 PF00268 Ribonucleotide reductase, small chain CPU05_RS08245 PF00542 Ribosomal protein L7/L12 C-terminal domain CPU05_RS08245 PF16320 Ribosomal protein L7/L12 dimerisation domain CPU05_RS08250 PF00466 Ribosomal protein L10 CPU05_RS08255 PF00687 Ribosomal protein L1p/L10e family CPU05_RS08260 PF03946 Ribosomal protein L11, N-terminal domain CPU05_RS08260 PF00298 Ribosomal protein L11, RNA binding domain CPU05_RS08265 PF02357 Transcription termination factor nusG CPU05_RS08265 PF00467 KOW motif CPU05_RS08275 PF00471 Ribosomal protein L33 CPU05_RS08285 PF00588 SpoU rRNA Methylase family CPU05_RS08285 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPU05_RS08290 PF00636 Ribonuclease III domain CPU05_RS08295 PF09190 DALR domain CPU05_RS08295 PF01406 tRNA synthetases class I (C) catalytic domain CPU05_RS08300 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPU05_RS08310 PF18073 Rubredoxin metal binding domain CPU05_RS08315 PF00692 dUTPase CPU05_RS08325 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CPU05_RS08330 PF03051 Peptidase C1-like family CPU05_RS08335 PF00300 Histidine phosphatase superfamily (branch 1) CPU05_RS08340 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CPU05_RS08345 PF01039 Carboxyl transferase domain CPU05_RS08350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPU05_RS08350 PF00289 Biotin carboxylase, N-terminal domain CPU05_RS08350 PF02785 Biotin carboxylase C-terminal domain CPU05_RS08360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPU05_RS08360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPU05_RS08370 PF03610 PTS system fructose IIA component CPU05_RS08370 PF03830 PTS system sorbose subfamily IIB component CPU05_RS08375 PF00158 Sigma-54 interaction domain CPU05_RS08375 PF03610 PTS system fructose IIA component CPU05_RS08375 PF00874 PRD domain CPU05_RS08385 PF03613 PTS system mannose/fructose/sorbose family IID component CPU05_RS08390 PF03609 PTS system sorbose-specific iic component CPU05_RS08395 PF03830 PTS system sorbose subfamily IIB component CPU05_RS08395 PF03610 PTS system fructose IIA component CPU05_RS08405 PF10263 SprT-like family CPU05_RS08410 PF16921 Tex protein YqgF-like domain CPU05_RS08410 PF17674 HHH domain CPU05_RS08410 PF09371 Tex-like protein N-terminal domain CPU05_RS08410 PF00575 S1 RNA binding domain CPU05_RS08420 PF00689 Cation transporting ATPase, C-terminus CPU05_RS08420 PF00690 Cation transporter/ATPase, N-terminus CPU05_RS08425 PF02540 NAD synthase CPU05_RS08430 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CPU05_RS08430 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CPU05_RS08430 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CPU05_RS08435 PF03808 Glycosyl transferase WecB/TagA/CpsF family CPU05_RS08440 PF07702 UTRA domain CPU05_RS08440 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS08445 PF01979 Amidohydrolase family CPU05_RS08450 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPU05_RS08450 PF03807 NADP oxidoreductase coenzyme F420-dependent CPU05_RS08455 PF08240 Alcohol dehydrogenase GroES-like domain CPU05_RS08455 PF00107 Zinc-binding dehydrogenase CPU05_RS08475 PF00854 POT family CPU05_RS08515 PF00152 tRNA synthetases class II (D, K and N) CPU05_RS08515 PF01336 OB-fold nucleic acid binding domain CPU05_RS08520 PF01207 Dihydrouridine synthase (Dus) CPU05_RS08525 PF01430 Hsp33 protein CPU05_RS08530 PF00004 ATPase family associated with various cellular activities (AAA) CPU05_RS08530 PF17862 AAA+ lid domain CPU05_RS08530 PF06480 FtsH Extracellular CPU05_RS08530 PF01434 Peptidase family M41 CPU05_RS08535 PF11734 TilS substrate C-terminal domain CPU05_RS08535 PF00156 Phosphoribosyl transferase domain CPU05_RS08535 PF01171 PP-loop family CPU05_RS08545 PF00575 S1 RNA binding domain CPU05_RS08555 PF01479 S4 domain CPU05_RS08560 PF14667 Polysaccharide biosynthesis C-terminal domain CPU05_RS08560 PF01943 Polysaccharide biosynthesis protein CPU05_RS08570 PF01195 Peptidyl-tRNA hydrolase CPU05_RS08575 PF00056 lactate/malate dehydrogenase, NAD binding domain CPU05_RS08575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPU05_RS08590 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CPU05_RS08600 PF01168 Alanine racemase, N-terminal domain CPU05_RS08600 PF00842 Alanine racemase, C-terminal domain CPU05_RS08605 PF01648 4'-phosphopantetheinyl transferase superfamily CPU05_RS08610 PF00270 DEAD/DEAH box helicase CPU05_RS08610 PF00271 Helicase conserved C-terminal domain CPU05_RS08615 PF01225 Mur ligase family, catalytic domain CPU05_RS08615 PF02875 Mur ligase family, glutamate ligase domain CPU05_RS08615 PF08245 Mur ligase middle domain CPU05_RS08625 PF01435 Peptidase family M48 CPU05_RS08630 PF04011 LemA family CPU05_RS08635 PF04203 Sortase domain CPU05_RS08640 PF07690 Major Facilitator Superfamily CPU05_RS08645 PF01197 Ribosomal protein L31 CPU05_RS08650 PF07497 Rho termination factor, RNA-binding domain CPU05_RS08650 PF07498 Rho termination factor, N-terminal domain CPU05_RS08650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPU05_RS08655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPU05_RS08665 PF05066 HB1, ASXL, restriction endonuclease HTH domain CPU05_RS08675 PF01966 HD domain CPU05_RS08695 PF00480 ROK family CPU05_RS08695 PF01325 Iron dependent repressor, N-terminal DNA binding domain CPU05_RS08710 PF01554 MatE CPU05_RS08725 PF13419 Haloacid dehalogenase-like hydrolase CPU05_RS08735 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPU05_RS08735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPU05_RS08740 PF04914 DltD protein CPU05_RS08745 PF00550 Phosphopantetheine attachment site CPU05_RS08755 PF13193 AMP-binding enzyme C-terminal domain CPU05_RS08755 PF00501 AMP-binding enzyme CPU05_RS08765 PF02632 BioY family CPU05_RS08770 PF12822 ECF transporter, substrate-specific component CPU05_RS08780 PF07690 Major Facilitator Superfamily CPU05_RS08790 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CPU05_RS08795 PF00144 Beta-lactamase CPU05_RS08805 PF00535 Glycosyl transferase family 2 CPU05_RS08810 PF00535 Glycosyl transferase family 2 CPU05_RS08810 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CPU05_RS08815 PF00005 ABC transporter CPU05_RS08820 PF01061 ABC-2 type transporter CPU05_RS08830 PF00535 Glycosyl transferase family 2 CPU05_RS08835 PF04138 GtrA-like protein CPU05_RS08855 PF00488 MutS domain V CPU05_RS08855 PF01713 Smr domain CPU05_RS08870 PF00206 Lyase CPU05_RS08870 PF10415 Fumarase C C-terminus CPU05_RS08875 PF00390 Malic enzyme, N-terminal domain CPU05_RS08875 PF03949 Malic enzyme, NAD binding domain CPU05_RS08880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPU05_RS08880 PF03466 LysR substrate binding domain CPU05_RS08885 PF00248 Aldo/keto reductase family CPU05_RS08890 PF00654 Voltage gated chloride channel CPU05_RS08895 PF13419 Haloacid dehalogenase-like hydrolase CPU05_RS08910 PF00230 Major intrinsic protein CPU05_RS08955 PF01432 Peptidase family M3 CPU05_RS08955 PF08439 Oligopeptidase F CPU05_RS08965 PF13802 Galactose mutarotase-like CPU05_RS08965 PF01055 Glycosyl hydrolases family 31 CPU05_RS08965 PF17137 Domain of unknown function (DUF5110) CPU05_RS08965 PF16338 Domain of unknown function (DUF4968) CPU05_RS08975 PF07690 Major Facilitator Superfamily CPU05_RS08980 PF02664 S-Ribosylhomocysteinase (LuxS) CPU05_RS08985 PF02028 BCCT, betaine/carnitine/choline family transporter CPU05_RS08990 PF00132 Bacterial transferase hexapeptide (six repeats) CPU05_RS08990 PF12464 Maltose acetyltransferase CPU05_RS08995 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPU05_RS08995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPU05_RS09005 PF00011 Hsp20/alpha crystallin family CPU05_RS09015 PF00892 EamA-like transporter family CPU05_RS09025 PF00005 ABC transporter CPU05_RS09025 PF12848 ABC transporter CPU05_RS09030 PF00860 Permease family CPU05_RS09035 PF01979 Amidohydrolase family CPU05_RS09045 PF00689 Cation transporting ATPase, C-terminus CPU05_RS09045 PF00690 Cation transporter/ATPase, N-terminus CPU05_RS09050 PF00528 Binding-protein-dependent transport system inner membrane component CPU05_RS09055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CPU05_RS09060 PF00528 Binding-protein-dependent transport system inner membrane component CPU05_RS09065 PF00571 CBS domain CPU05_RS09065 PF00005 ABC transporter CPU05_RS09070 PF01546 Peptidase family M20/M25/M40 CPU05_RS09070 PF07687 Peptidase dimerisation domain CPU05_RS09075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CPU05_RS09075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPU05_RS09090 PF03610 PTS system fructose IIA component CPU05_RS09095 PF02734 DAK2 domain CPU05_RS09100 PF02733 Dak1 domain CPU05_RS09105 PF04607 Region found in RelA / SpoT proteins CPU05_RS09115 PF02525 Flavodoxin-like fold CPU05_RS09140 PF04226 Transglycosylase associated protein CPU05_RS09145 PF00248 Aldo/keto reductase family CPU05_RS09155 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CPU05_RS09160 PF01327 Polypeptide deformylase CPU05_RS09170 PF01047 MarR family CPU05_RS09185 PF00005 ABC transporter CPU05_RS09190 PF13411 MerR HTH family regulatory protein CPU05_RS09190 PF07739 TipAS antibiotic-recognition domain CPU05_RS09195 PF02627 Carboxymuconolactone decarboxylase family CPU05_RS09205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPU05_RS09205 PF03466 LysR substrate binding domain CPU05_RS09210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CPU05_RS09215 PF06800 Sugar transport protein CPU05_RS09220 PF05025 RbsD / FucU transport protein family CPU05_RS09230 PF00356 Bacterial regulatory proteins, lacI family CPU05_RS09235 PF01566 Natural resistance-associated macrophage protein CPU05_RS09245 PF03170 Bacterial cellulose synthase subunit CPU05_RS09245 PF03552 Cellulose synthase CPU05_RS09245 PF00535 Glycosyl transferase family 2 CPU05_RS09245 PF07238 PilZ domain CPU05_RS09265 PF05368 NmrA-like family CPU05_RS09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPU05_RS09280 PF03466 LysR substrate binding domain CPU05_RS09290 PF00300 Histidine phosphatase superfamily (branch 1) CPU05_RS09295 PF03952 Enolase, N-terminal domain CPU05_RS09295 PF00113 Enolase, C-terminal TIM barrel domain CPU05_RS09325 PF07943 Penicillin-binding protein 5, C-terminal domain CPU05_RS09325 PF00768 D-alanyl-D-alanine carboxypeptidase CPU05_RS09330 PF00512 His Kinase A (phospho-acceptor) domain CPU05_RS09330 PF16736 Single Cache-like CPU05_RS09330 PF00989 PAS fold CPU05_RS09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPU05_RS09335 PF00486 Transcriptional regulatory protein, C terminal CPU05_RS09335 PF00072 Response regulator receiver domain CPU05_RS09340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CPU05_RS09340 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CPU05_RS09345 PF00478 IMP dehydrogenase / GMP reductase domain CPU05_RS09345 PF00571 CBS domain CPU05_RS09355 PF01926 50S ribosome-binding GTPase CPU05_RS09355 PF06071 Protein of unknown function (DUF933) CPU05_RS09360 PF06107 Bacterial protein of unknown function (DUF951) CPU05_RS09365 PF02195 ParB-like nuclease domain CPU05_RS09365 PF17762 HTH domain found in ParB protein CPU05_RS09370 PF02527 rRNA small subunit methyltransferase G CPU05_RS09380 PF01156 Inosine-uridine preferring nucleoside hydrolase CPU05_RS09385 PF07662 Na+ dependent nucleoside transporter C-terminus CPU05_RS09385 PF01773 Na+ dependent nucleoside transporter N-terminus CPU05_RS09395 PF00877 NlpC/P60 family CPU05_RS09405 PF05958 tRNA (Uracil-5-)-methyltransferase CPU05_RS09405 PF01938 TRAM domain CPU05_RS09410 PF00072 Response regulator receiver domain CPU05_RS09410 PF00196 Bacterial regulatory proteins, luxR family CPU05_RS09415 PF07730 Histidine kinase CPU05_RS09415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPU05_RS09425 PF00005 ABC transporter CPU05_RS09430 PF09335 SNARE associated Golgi protein CPU05_RS09450 PF01757 Acyltransferase family CPU05_RS09455 PF03641 Possible lysine decarboxylase CPU05_RS09465 PF00005 ABC transporter CPU05_RS09480 PF03577 Peptidase family C69 CPU05_RS09485 PF12792 CSS motif domain associated with EAL CPU05_RS09485 PF00563 EAL domain CPU05_RS09490 PF00990 Diguanylate cyclase, GGDEF domain CPU05_RS09500 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CPU05_RS09500 PF04616 Glycosyl hydrolases family 43 CPU05_RS09515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPU05_RS09515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPU05_RS09525 PF00480 ROK family CPU05_RS09530 PF00083 Sugar (and other) transporter CPU05_RS09535 PF01263 Aldose 1-epimerase CPU05_RS09550 PF01979 Amidohydrolase family CPU05_RS09555 PF01380 SIS domain CPU05_RS09560 PF07702 UTRA domain CPU05_RS09560 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS09565 PF03613 PTS system mannose/fructose/sorbose family IID component CPU05_RS09570 PF03609 PTS system sorbose-specific iic component CPU05_RS09575 PF03830 PTS system sorbose subfamily IIB component CPU05_RS09605 PF06177 QueT transporter CPU05_RS09615 PF00107 Zinc-binding dehydrogenase CPU05_RS09615 PF08240 Alcohol dehydrogenase GroES-like domain CPU05_RS09620 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPU05_RS09620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPU05_RS09625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPU05_RS09625 PF00364 Biotin-requiring enzyme CPU05_RS09625 PF02817 e3 binding domain CPU05_RS09630 PF02779 Transketolase, pyrimidine binding domain CPU05_RS09630 PF02780 Transketolase, C-terminal domain CPU05_RS09635 PF00676 Dehydrogenase E1 component CPU05_RS09640 PF03099 Biotin/lipoate A/B protein ligase family CPU05_RS09640 PF10437 Bacterial lipoate protein ligase C-terminus CPU05_RS09645 PF02378 Phosphotransferase system, EIIC CPU05_RS09650 PF00232 Glycosyl hydrolase family 1 CPU05_RS09655 PF07702 UTRA domain CPU05_RS09655 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS09670 PF01022 Bacterial regulatory protein, arsR family CPU05_RS09685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPU05_RS09685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CPU05_RS09690 PF00356 Bacterial regulatory proteins, lacI family CPU05_RS09695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPU05_RS09695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPU05_RS09700 PF01842 ACT domain CPU05_RS09700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPU05_RS09700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPU05_RS09705 PF08125 Mannitol dehydrogenase C-terminal domain CPU05_RS09705 PF01232 Mannitol dehydrogenase Rossmann domain CPU05_RS09710 PF02614 Glucuronate isomerase CPU05_RS09715 PF16257 tagaturonate epimerase CPU05_RS09745 PF00534 Glycosyl transferases group 1 CPU05_RS09745 PF13439 Glycosyltransferase Family 4 CPU05_RS09775 PF03808 Glycosyl transferase WecB/TagA/CpsF family CPU05_RS09795 PF02350 UDP-N-acetylglucosamine 2-epimerase CPU05_RS09800 PF13180 PDZ domain CPU05_RS09805 PF00753 Metallo-beta-lactamase superfamily CPU05_RS09820 PF13426 PAS domain CPU05_RS09820 PF00672 HAMP domain CPU05_RS09820 PF00512 His Kinase A (phospho-acceptor) domain CPU05_RS09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPU05_RS09825 PF00486 Transcriptional regulatory protein, C terminal CPU05_RS09825 PF00072 Response regulator receiver domain CPU05_RS09835 PF14602 Hexapeptide repeat of succinyl-transferase CPU05_RS09835 PF00132 Bacterial transferase hexapeptide (six repeats) CPU05_RS09835 PF12464 Maltose acetyltransferase CPU05_RS09840 PF00248 Aldo/keto reductase family CPU05_RS09870 PF01381 Helix-turn-helix CPU05_RS09875 PF00550 Phosphopantetheine attachment site CPU05_RS09875 PF14765 Polyketide synthase dehydratase CPU05_RS09875 PF08240 Alcohol dehydrogenase GroES-like domain CPU05_RS09875 PF08659 KR domain CPU05_RS09875 PF16197 Ketoacyl-synthetase C-terminal extension CPU05_RS09875 PF02801 Beta-ketoacyl synthase, C-terminal domain CPU05_RS09875 PF00698 Acyl transferase domain CPU05_RS09875 PF00109 Beta-ketoacyl synthase, N-terminal domain CPU05_RS09880 PF01022 Bacterial regulatory protein, arsR family CPU05_RS09930 PF02378 Phosphotransferase system, EIIC CPU05_RS09935 PF02378 Phosphotransferase system, EIIC CPU05_RS09935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CPU05_RS09940 PF00356 Bacterial regulatory proteins, lacI family CPU05_RS09940 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CPU05_RS09945 PF00893 Small Multidrug Resistance protein CPU05_RS09955 PF01741 Large-conductance mechanosensitive channel, MscL CPU05_RS09965 PF00871 Acetokinase family CPU05_RS09985 PF00005 ABC transporter CPU05_RS09985 PF02687 FtsX-like permease family CPU05_RS09985 PF12704 MacB-like periplasmic core domain CPU05_RS10005 PF04304 Protein of unknown function (DUF454) CPU05_RS10020 PF02590 Predicted SPOUT methyltransferase CPU05_RS10025 PF12705 PD-(D/E)XK nuclease superfamily CPU05_RS10025 PF00580 UvrD/REP helicase N-terminal domain CPU05_RS10025 PF13361 UvrD-like helicase C-terminal domain CPU05_RS10030 PF12705 PD-(D/E)XK nuclease superfamily CPU05_RS10040 PF00860 Permease family CPU05_RS10045 PF03352 Methyladenine glycosylase CPU05_RS10045 PF00958 GMP synthase C terminal domain CPU05_RS10045 PF13302 Acetyltransferase (GNAT) domain CPU05_RS10045 PF00117 Glutamine amidotransferase class-I CPU05_RS10045 PF13673 Acetyltransferase (GNAT) domain CPU05_RS10055 PF03553 Na+/H+ antiporter family CPU05_RS10060 PF13091 PLD-like domain CPU05_RS10060 PF13396 Phospholipase_D-nuclease N-terminal CPU05_RS10065 PF01230 HIT domain CPU05_RS10070 PF10502 Signal peptidase, peptidase S26 CPU05_RS10075 PF02378 Phosphotransferase system, EIIC CPU05_RS10085 PF01112 Asparaginase CPU05_RS10090 PF01546 Peptidase family M20/M25/M40 CPU05_RS10095 PF00392 Bacterial regulatory proteins, gntR family CPU05_RS10095 PF07702 UTRA domain CPU05_RS10100 PF03883 Peroxide stress protein YaaA CPU05_RS10105 PF13932 GidA associated domain CPU05_RS10105 PF01134 Glucose inhibited division protein A CPU05_RS10110 PF01926 50S ribosome-binding GTPase CPU05_RS10110 PF12631 MnmE helical domain CPU05_RS10110 PF10396 GTP-binding protein TrmE N-terminus CPU05_RS10115 PF02096 60Kd inner membrane protein CPU05_RS10120 PF00825 Ribonuclease P CPU05_RS10125 PF00468 Ribosomal protein L34